Successive DNA extractions improve characterization of soil microbial communities

PubMed Central

de Hollander, Mattias; Smidt, Hauke; van Veen, Johannes A.

2017-01-01

Currently, characterization of soil microbial communities relies heavily on the use of molecular approaches. Independently of the approach used, soil DNA extraction is a crucial step, and success of downstream procedures will depend on how well DNA extraction was performed. Often, studies describing and comparing soil microbial communities are based on a single DNA extraction, which may not lead to a representative recovery of DNA from all organisms present in the soil. The use of successive DNA extractions might improve soil microbial characterization, but the benefit of this approach has only been limitedly studied. To determine whether successive DNA extractions of the same soil sample would lead to different observations in terms of microbial abundance and community composition, we performed three successive extractions, with two widely used commercial kits, on a range of clay and sandy soils. Successive extractions increased DNA yield considerably (1–374%), as well as total bacterial and fungal abundances in most of the soil samples. Analysis of the 16S and 18S ribosomal RNA genes using 454-pyrosequencing, revealed that microbial community composition (taxonomic groups) observed in the successive DNA extractions were similar. However, successive DNA extractions did reveal several additional microbial groups. For some soil samples, shifts in microbial community composition were observed, mainly due to shifts in relative abundance of a number of microbial groups. Our results highlight that performing successive DNA extractions optimize DNA yield, and can lead to a better picture of overall community composition. PMID:28168105

SITE DEMONSTRATION OF THE TORONTO HARBOUR COMMISSIONERS SOIL RECYCLING PROJECT

EPA Science Inventory

The U.S. Environmental Protection Agency (EPA), in cooperation with the Toronto Harbour Commissioners (THC), conducted a Superfund InnovativeTechnology Evaluation (SITE) demonstration of the THC Soil Recycle Treatment Train. The treatment train consists of three technologies op...

A Simple Approach for Demonstrating Soil Water Retention and Field Capacity

ERIC Educational Resources Information Center

Howard, A.; Heitman, J. L.; Bowman, D.

2010-01-01

It is difficult to demonstrate the soil water retention relationship and related concepts because the specialized equipment required for performing these measurements is unavailable in most classrooms. This article outlines a low-cost, easily visualized method by which these concepts can be demonstrated in most any classroom. Columns (62.5 cm…

Sampling Soil for Characterization and Site Description

NASA Technical Reports Server (NTRS)

Levine, Elissa

1999-01-01

The sampling scheme for soil characterization within the GLOBE program is uniquely different from the sampling methods of the other protocols. The strategy is based on an understanding of the 5 soil forming factors (parent material, climate, biota, topography, and time) at each study site, and how each of these interact to produce a soil profile with unique characteristics and unique input and control into the atmospheric, biological, and hydrological systems. Soil profile characteristics, as opposed to soil moisture and temperature, vegetative growth, and atmospheric and hydrologic conditions, change very slowly, depending on the parameter being measured, ranging from seasonally to many thousands of years. Thus, soil information, including profile description and lab analysis, is collected only one time for each profile at a site. These data serve two purposes: 1) to supplement existing spatial information about soil profile characteristics across the landscape at local, regional, and global scales, and 2) to provide specific information within a given area about the basic substrate to which elements within the other protocols are linked. Because of the intimate link between soil properties and these other environmental elements, the static soil properties at a given site are needed to accurately interpret and understand the continually changing dynamics of soil moisture and temperature, vegetation growth and phenology, atmospheric conditions, and chemistry and turbidity in surface waters. Both the spatial and specific soil information can be used for modeling purposes to assess and make predictions about global change.

Field Demonstrations of Five Geophysical Methods that Could Be Used to Characterize Deposits of Alluvial Aggregate

USGS Publications Warehouse

Ellefsen, K.J.; Burton, B.L.; Lucius, J.E.; Haines, S.S.; Fitterman, D.V.; Witty, J.A.; Carlson, D.; Milburn, B.; Langer, W.H.

2007-01-01

Personnel from the U.S. Geological Survey and Martin Marietta Aggregates, Inc., conducted field demonstrations of five different geophysical methods to show how these methods could be used to characterize deposits of alluvial aggregate. The methods were time-domain electromagnetic sounding, electrical resistivity profiling, S-wave reflection profiling, S-wave refraction profiling, and P-wave refraction profiling. All demonstrations were conducted at one site within a river valley in central Indiana, where the stratigraphy consisted of 1 to 2 meters of clay-rich soil, 20 to 35 meters of alluvial sand and gravel, 1 to 6 meters of clay, and multiple layers of limestone and dolomite bedrock. All geophysical methods, except time-domain electromagnetic sounding, provided information about the alluvial aggregate that was consistent with the known geology. Although time-domain electromagnetic sounding did not work well at this site, it has worked well at other sites with different geology. All of these geophysical methods complement traditional methods of geologic characterization such as drilling.

Characterization of soil spatial variability for site-specific management using soil electrical conductivity and other remotely sensed data

NASA Astrophysics Data System (ADS)

Bang, Jisu

Field-scale characterization of soil spatial variability using remote sensing technology has potential for achieving the successful implementation of site-specific management (SSM). The objectives of this study were to: (i) examine the spatial relationships between apparent soil electrical conductivity (EC a) and soil chemical and physical properties to determine if EC a could be useful to characterize soil properties related to crop productivity in the Coastal Plain and Piedmont of North Carolina; (ii) evaluate the effects of in-situ soil moisture variation on ECa mapping as a basis for characterization of soil spatial variability and as a data layer in cluster analysis as a means of delineating sampling zones; (iii) evaluate clustering approaches using different variable sets for management zone delineation to characterize spatial variability in soil nutrient levels and crop yields. Studies were conducted in two fields in the Piedmont and three fields in the Coastal Plain of North Carolina. Spatial measurements of ECa via electromagnetic induction (EMI) were compared with soil chemical parameters (extractable P, K, and micronutrients; pH, cation exchange capacity [CEC], humic matter or soil organic matter; and physical parameters (percentage sand, silt, and clay; and plant-available water [PAW] content; bulk density; cone index; saturated hydraulic conductivity [Ksat] in one of the coastal plain fields) using correlation analysis across fields. We also collected ECa measurements in one coastal plain field on four days with significantly different naturally occurring soil moisture conditions measured in five increments to 0.75 m using profiling time-domain reflectometry probes to evaluate the temporal variability of ECa associated with changes in in-situ soil moisture content. Nonhierarchical k-means cluster analysis using sensor-based field attributes including vertical ECa, near-infrared (NIR) radiance of bare-soil from an aerial color infrared (CIR) image

A Novel Method for Measurement and Characterization of Soil Macroporosity

Treesearch

Christopher Barton; Tasos Karathanasis

2002-01-01

Quantitative macropore characterizations were performed in large zero-tension soil lysimeters of a Maury silt loam (fine, mixed, mesic Typic Paleudalf) and a Loradale silt loam (fine, silty, mixed, mesic Typic Axgiudoll) soil in an effort to assess potential colloid transport. Steel pipe sections (50 cm diameter X 100 cm length) were hydraulically driven into the soil...

CHARACTERIZATION OF CHROMIUM-CONTAMINATED SOILS USING FIELD-PORTABLE X-RAY FLUORESCENCE

EPA Science Inventory

A detailed characterization of the underlying and adjacent soils near a chrome plating shop utilized field-portable X- ray fluorescence (XRF) as a screening tool. XRF permitted real-time acquisition of estimates for total metal content of soils. A trailer-mounted soil coring unit...

Moment Analysis Characterizing Water Flow in Repellent Soils from On- and Sub-Surface Point Sources

NASA Astrophysics Data System (ADS)

Xiong, Yunwu; Furman, Alex; Wallach, Rony

2010-05-01

Water repellency has a significant impact on water flow patterns in the soil profile. Flow tends to become unstable in such soils, which affects the water availability to plants and subsurface hydrology. In this paper, water flow in repellent soils was experimentally studied using the light reflection method. The transient 2D moisture profiles were monitored by CCD camera for tested soils packed in a transparent flow chamber. Water infiltration experiments and subsequent redistribution from on-surface and subsurface point sources with different flow rates were conducted for two soils of different repellency degrees as well as for wettable soil. We used spatio-statistical analysis (moments) to characterize the flow patterns. The zeroth moment is related to the total volume of water inside the moisture plume, and the first and second moments are affinitive to the center of mass and spatial variances of the moisture plume, respectively. The experimental results demonstrate that both the general shape and size of the wetting plume and the moisture distribution within the plume for the repellent soils are significantly different from that for the wettable soil. The wetting plume of the repellent soils is smaller, narrower, and longer (finger-like) than that of the wettable soil compared with that for the wettable soil that tended to roundness. Compared to the wettable soil, where the soil water content decreases radially from the source, moisture content for the water-repellent soils is higher, relatively uniform horizontally and gradually increases with depth (saturation overshoot), indicating that flow tends to become unstable. Ellipses, defined around the mass center and whose semi-axes represented a particular number of spatial variances, were successfully used to simulate the spatial and temporal variation of the moisture distribution in the soil profiles. Cumulative probability functions were defined for the water enclosed in these ellipses. Practically identical

DEMONSTRATION BULLETIN: CYCLONE FURNACE SOIL VITRI- FICATION TECHNOLOGY - BABCOCK & WILCOX

EPA Science Inventory

Babcock and Wilcox's (B&W) cyclone furnace is an innovative thermal technology which may offer advantages in treating soils containing organics, heavy metals, and/or radionuclide contaminants. The furnace used in the SITE demonstration was a 4- to 6-million Btu/hr pilot system....

Use of photoacoustic mid-infrared spectroscopy to characterize soil properties and soil organic matter stability

NASA Astrophysics Data System (ADS)

Peltre, Clement; Bruun, Sander; Du, Changwen; Stoumann Jensen, Lars

2014-05-01

The persistence of soil organic matter (SOM) is recognized as a major ecosystem property due to its key role in earth carbon cycling, soil quality and ecosystem services. SOM stability is typically studied using biological methods such as measuring CO2-C evolution from microbial decomposition of SOM during laboratory incubation or by physical or chemical fractionation methods, allowing the separation of a labile fraction of SOM. However these methods are time consuming and there is still a need for developing reliable techniques to characterize SOM stability, providing both quantitative measurements and qualitative information, in order to improve our understanding of the mechanisms controlling SOM persistence. Several spectroscopic techniques have been used to characterize and predict SOM stability, such as near infrared reflectance spectroscopy (NIRS) and diffuse reflectance mid-infrared spectroscopy (DRIFT). The latter allows a proper identification of spectral regions corresponding to vibrations of specific molecular or functional groups associated with SOM lability. However, reflectance spectroscopy for soil analyses raises some difficulties related to the low reflectance of soils, and to the high influence of particle size. In the last three decades, the progresses in microphone sensitivity dramatically increased the performance of photoacoustic Fourier transform mid-infrared spectroscopy (FTIR-PAS). This technique offers benefits over reflectance spectroscopy techniques, because particle size and the level of sample reflectance have little effect of on the PAS signal, since FTIR-PAS is a direct absorption technique. Despite its high potential for soil analysis, only a limited number of studies have so far applied FTIR-PAS for soil characterization and its potential for determining SOM degradability still needs to be investigated. The objective of this study was to assess the potential of FTIR-PAS for the characterization of SOM decomposability during

CHARACTERIZING SOILS FOR HAZAROUDS WASTE SITE ASSESSMENTS

EPA Science Inventory

The purpose of this paper is to provide guidance to Remedial Project Managers (RPM) and On-Scene Coordinators (OSC) concerning soil characterization data types required for decision-making in the CERCLA RI/FS process related to risk assessment and remedial alternative evaluation ...

Characterization of the geology, geochemistry, hydrology and microbiology of the in-situ air stripping demonstration site at the Savannah River Site

DOE Office of Scientific and Technical Information (OSTI.GOV)

Eddy, C.A.; Looney, B.B.; Dougherty, J.M.

1991-05-01

The Savannah River Site is the location of an Integrated Demonstration Project designed to evaluate innovative remediation technologies for environmental restoration at sites contaminated with volatile organic contaminants. This demonstration utilizes directionally drilled horizontal wells to deliver gases and extract contaminants from the subsurface. Phase I of the Integrated Demonstration focused on the application and development of in-situ air stripping technologies to remediate soils and sediments above and below the water table as well as groundwater contaminated with volatile organic contaminants. The objective of this report is to provide baseline information on the geology, geochemistry, hydrology, and microbiology of themore » demonstration site prior to the test. The distribution of contaminants in soils and sediments in the saturated zone and groundwater is emphasized. These data will be combined with data collected after the demonstration in order to evaluate the effectiveness of in-situ air stripping. New technologies for environmental characterization that were evaluated include depth discrete groundwater sampling (HydroPunch) and three-dimensional modeling of contaminant data.« less

Characterization of soils from an industrial complex contaminated with elemental mercury

DOE Office of Scientific and Technical Information (OSTI.GOV)

Miller, Carrie L; Watson, David B; Liang, Liyuan

2013-01-01

Historic use of liquid elemental mercury (Hg(0)l) at the Y-12 National Security Complex in Oak Ridge, TN, USA resulted in large deposits of Hg(0)l in the soils. An evaluation of analytical tools for characterizing the speciation of Hg in the soils at the Y-12 facility was conducted and these tequniques were used to examine the speciation of Hg in two soil cores collect at the site. These include X-ray fluorescence (XRF), soil Hg(0) headspace analysis, and total Hg determination by acid digestion coupled with cold vapor atomic absorption. Hg concentrations determined using XRF, a tool that has been suggestions formore » quick onsite characterization of soils, were lower than concentrations determined by HgT analysis and as a result this technique is not suitable for the evaluation of Hg concentrations in heterogeneous soils containing Hg(0)l. Hg(0)g headspace analysis can be used to examine the presence of Hg(0)l in soils and when coupled with HgT analysis an understanding of the speciation of Hg in soils can be obtained. Two soil cores collected within the Y-12 complex highlight the heterogeneity in the depth and extent of Hg contamination, with Hg concentrations ranging from 0.05 to 8400 mg/kg. At one location Hg(0)l was distributed throughout 3.2 meters of core whereas the core from a location only 12 meters away only contained Hg(0)l in 0.3 m zone of the core. Sequential extractions, used to examine the forms of Hg in the soils, indicated that at depths within the core that have low Hg concentrations organically associated Hg is dominant. Soil from the zone of groundwater inundation showed reduced characteristics and the Hg is likely present as Hg-sulfide species. At this location it appears that Hg transported within the groundwater is a source of Hg to the soil. Overall the characterization of Hg in soils containing Hg(0) l is difficult due to the heterogeneous distribution within the soils and this challenge is enhanced in industrial facilities in which

Disturbed soil characterization workshop: post-meeting summary

NASA Astrophysics Data System (ADS)

Cathcart, J. Michael

2010-04-01

Disturbance of ground surfaces can arise from a variety of processes, both manmade and natural. Burying landmines, vehicle movement, and walking are representative examples of processes that disturb ground surfaces. The nature of the specific disturbance process can lead to the observables that can aid the detection and identification of that process. While much research has been conducted in this area, fundamental questions related to the remote detection and characterization of disturbed soil surfaces remain unanswered. Under the sponsorship of the Army Research Office (ARO), the Night Vision and Electronic Sensors Directorate (NVESD), and the U.S. Army Corps of Engineers (USACE) Engineering Research and Development Center (ERDC), Georgia Tech hosted a workshop to address Remote Sensing Methods for Disturbed Soil Characterization. The workshop was held January 15-17, 2008 in Atlanta. The primary objective of this workshop was to take a new look at the disturbed soil problem in general as well as its relation to buried explosive detection and other manmade disturbances. In particular, the participants sought to outline the basic science and technology questions that need to be addressed across the full spectrum of military applications to fully exploit this phenomenon. This presentation will outline the approach taken during the workshop and provide a summary of the conclusions.

Effect of Spatial Resolution for Characterizing Soil Properties from Imaging Spectrometer Data

NASA Astrophysics Data System (ADS)

Dutta, D.; Kumar, P.; Greenberg, J. A.

2015-12-01

The feasibility of quantifying soil constituents over large areas using airborne hyperspectral data [0.35 - 2.5 μm] in an ensemble bootstrapping lasso algorithmic framework has been demonstrated previously [1]. However the effects of coarsening the spatial resolution of hyperspectral data on the quantification of soil constituents are unknown. We use Airborne Visible Infrared Imaging Spectrometer (AVIRIS) data collected at 7.6m resolution over Birds Point New Madrid (BPNM) floodway for up-scaling and generating multiple coarser resolution datasets including the 60m Hyperspectral Infrared Imager (HyspIRI) like data. HyspIRI is a proposed visible shortwave/thermal infrared mission, which will provide global data over a spectral range of 0.35 - 2.5μm at a spatial resolution of 60m. Our results show that the lasso method, which is based on point scale observational data, is scalable. We found consistent good model performance (R2) values (0.79 < R2 < 0.82) and correct classifications as per USDA soil texture classes at multiple spatial resolutions. The results further demonstrate that the attributes of the pdf for different soil constituents across the landscape and the within-pixel variance are well preserved across scales. Our analysis provides a methodological framework with a sufficient set of metrics for assessing the performance of scaling up analysis from point scale observational data and may be relevant for other similar remote sensing studies. [1] Dutta, D.; Goodwell, A.E.; Kumar, P.; Garvey, J.E.; Darmody, R.G.; Berretta, D.P.; Greenberg, J.A., "On the Feasibility of Characterizing Soil Properties From AVIRIS Data," Geoscience and Remote Sensing, IEEE Transactions on, vol.53, no.9, pp.5133,5147, Sept. 2015. doi: 10.1109/TGRS.2015.2417547.

Imaging and Analytical Approaches for Characterization of Soil Mineral Weathering

DOE Office of Scientific and Technical Information (OSTI.GOV)

Dohnalkova, Alice; Arey, Bruce; Varga, Tamas

Soil minerals weathering is the primary natural source of nutrients necessary to sustain productivity in terrestrial ecosystems. Soil microbial communities increase soil mineral weathering and mineral-derived nutrient availability through physical and chemical processes. Rhizosphere, the zone immediately surrounding plant roots, is a biogeochemical hotspot with microbial activity, soil organic matter production, mineral weathering, and secondary phase formation all happening in a small temporally ephemeral zone of steep geochemical gradients. The detailed exploration of the micro-scale rhizosphere is essential to our better understanding of large-scale processes in soils, such as nutrient cycling, transport and fate of soil components, microbial-mineral interactions, soilmore » erosion, soil organic matter turnover and its molecular-level characterization, and predictive modeling.« less

Characterization of soils from an industrial complex contaminated with elemental mercury

DOE Office of Scientific and Technical Information (OSTI.GOV)

Miller, Carrie L., E-mail: millercl@ornl.gov; Watson, David B.; Lester, Brian P.

2013-08-15

Historical use of liquid elemental mercury (Hg(0){sub l}) at the Y-12 National Security Complex in Oak Ridge, TN, USA, resulted in large deposits of Hg(0){sub l} in the soils. The fate and distribution of the spilled Hg(0) are not well characterized. In this study we evaluated analytical tools for characterizing the speciation of Hg in the contaminated soils and then used the analytical techniques to examine the speciation of Hg in two soil cores collected at the site. These include x-ray fluorescence (XRF), soil Hg(0) headspace analysis, and total Hg determination by acid digestion coupled with cold vapor atomic absorptionmore » (HgT). XRF was not found to be suitable for evaluating Hg concentrations in heterogeneous soils containing low concentration of Hg or Hg(0) because Hg concentrations determined using this method were lower than those determined by HgT analysis and the XRF detection limit is 20 mg/kg. Hg(0){sub g} headspace analysis coupled with HgT measurements yielded good results for examining the presence of Hg(0){sub l} in soils and the speciation of Hg. The two soil cores are highly heterogeneous in both the depth and extent of Hg contamination, with Hg concentrations ranging from 0.05 to 8400 mg/kg. In the first core, Hg(0){sub l} was distributed throughout the 3.2 m depth, whereas the second core, from a location 12 m away, contained Hg(0){sub l} in a 0.3 m zone only. Sequential extractions showed organically associated Hg dominant at depths with low Hg concentration. Soil from the zone of groundwater saturation showed reducing conditions and the Hg is likely present as Hg-sulfide species. At this depth, lateral Hg transport in the groundwater may be a source of Hg detected in the soil at the deeper soil depths. Overall, characterization of soils containing Hg(0){sub l} is difficult because of the heterogeneous distribution of Hg within the soils. This is exacerbated in industrial facilities where fill materials make up much of the soils and

Profile of a city: characterizing and classifying urban soils in the city of Ghent

NASA Astrophysics Data System (ADS)

Delbecque, Nele; Verdoodt, Ann

2017-04-01

Worldwide, urban lands are expanding rapidly. Conversion of agricultural and natural landscapes to urban fabric can strongly influence soil properties through soil sealing, excavation, leveling, contamination, waste disposal and land management. Urban lands, often characterized by intensive use, need to deliver many production, ecological and cultural ecosystem services. To safeguard this natural capital for future generations, an improved understanding of biogeochemical characteristics, processes and functions of urban soils in time and space is essential. Additionally, existing (inter)national soil classification systems, based on the identification of soil genetic horizons, do not always allow a functional classification of urban soils. This research aims (1) to gain insight into urban soils and their properties in the city of Ghent (Belgium), and (2) to develop a procedure to functionally incorporate urban soils into existing (inter)national soil classification systems. Undisturbed soil cores (depth up to 1.25 m) are collected at 15 locations in Ghent with different times since development and land uses. Geotek MSCL-scans are taken to determine magnetic susceptibility and gamma density and to obtain high resolution images. Physico-chemical characterization of the soil cores is performed by means of detailed soil profile descriptions, traditional lab analyses, as well as proximal soil sensing techniques (XRF). The first results of this research will be presented and critically discussed to improve future efforts to characterize, classify and evaluate urban soils and their ecosystem services.

Characterization of free nitrogen fixing bacteria of the genus Azotobacter in organic vegetable-grown Colombian soils

PubMed Central

Jiménez, Diego Javier; Montaña, José Salvador; Martínez, María Mercedes

2011-01-01

With the purpose of isolating and characterizing free nitrogen fixing bacteria (FNFB) of the genus Azotobacter, soil samples were collected randomly from different vegetable organic cultures with neutral pH in different zones of Boyacá-Colombia. Isolations were done in selective free nitrogen Ashby-Sucrose agar obtaining a recovery of 40%. Twenty four isolates were evaluated for colony and cellular morphology, pigment production and metabolic activities. Molecular characterization was carried out using amplified ribosomal DNA restriction analysis (ARDRA). After digestion of 16S rDNA Y1-Y3 PCR products (1487pb) with AluI, HpaII and RsaI endonucleases, a polymorphism of 16% was obtained. Cluster analysis showed three main groups based on DNA fingerprints. Comparison between ribotypes generated by isolates and in silico restriction of 16S rDNA partial sequences with same restriction enzymes was done with Gen Workbench v.2.2.4 software. Nevertheless, Y1-Y2 PCR products were analysed using BLASTn. Isolate C5T from tomato (Lycopersicon esculentum) grown soils presented the same in silico restriction patterns with A. chroococcum (AY353708) and 99% of similarity with the same sequence. Isolate C5CO from cauliflower (Brassica oleracea var. botrytis) grown soils showed black pigmentation in Ashby-Benzoate agar and high similarity (91%) with A. nigricans (AB175651) sequence. In this work we demonstrated the utility of molecular techniques and bioinformatics tools as a support to conventional techniques in characterization of the genus Azotobacter from vegetable-grown soils. PMID:24031700

DEMONSTRATION BULLETIN: BIOGENESIS SOIL WASHING TECHNOLOGY - BIOGENESIS

EPA Science Inventory

The BioGenesisSM soil washing technology was developed by BioGenesis Enterprises, Inc. to remove organic compounds from soil. The technology uses a proprietary solution (BioGenesisSM cleaner) to transfer organic compounds from the soil matrix to a liquid phase. BioGenesis claims...

Non-Invasive Methods to Characterize Soil-Plant Interactions at Different Scales

NASA Astrophysics Data System (ADS)

Javaux, M.; Kemna, A.; Muench, M.; Oberdoerster, C.; Pohlmeier, A.; Vanderborght, J.; Vereecken, H.

2006-05-01

Root water uptake is a dynamic and non-linear process, which interacts with the soil natural variability and boundary conditions to generate heterogeneous spatial distributions of soil water. Soil-root fluxes are spatially variable due to heterogeneous gradients and hydraulic connections between soil and roots. While 1-D effective representation of the root water uptake has been successfully applied to predict transpiration and average water content profiles, finer spatial characterization of the water distribution may be needed when dealing with solute transport. Indeed, root water uptake affects the water velocity field, which has an effect on solute velocity and dispersion. Although this variability originates from small-scale processes, these may still play an important role at larger scales. Therefore, in addition to investigate the variability of the soil hydraulic properties, experimental and numerical tools for characterizing root water uptake (and its effects on soil water distribution) from the pore to the field scales are needed to predict in a proper way the solute transport. Obviously, non-invasive and modeling techniques which are helpful to achieve this objective will evolve with the scale of interest. At the pore scale, soil structure and root-soil interface phenomena have to be investigated to understand the interactions between soil and roots. Magnetic resonance imaging may help to monitor water gradients and water content changes around roots while spectral induced polarization techniques may be used to characterize the structure of the pore space. At the column scale, complete root architecture of small plants and water content depletion around roots can be imaged by magnetic resonance. At that scale, models should explicitly take into account the three-dimensional gradient dependency of the root water uptake, to be able to predict solute transport. At larger scales however, simplified models, which implicitly take into account the heterogeneous

Apollo 17 Soil Characterization for Reflectance Spectroscopy

NASA Technical Reports Server (NTRS)

Taylor, L. A.; Pieters, C.; Patchen, A.; Morris, R. V.; Keller, L. P.; Wentworth, S.; McKay, D. S.

1999-01-01

It is the fine fractions that dominate the observed spectral signatures of bulk lunar soil, and the next to the smallest size fractions are the most similar to the overall properties of the bulk soil. Thus, our Lunar Soil Characterization Consortium has concentrated on understanding the inter-relations of compositional, mineralogical, and optical properties of the <45-micron size fraction and its component sizes (20-44 micron, 10-20 micron, and <10 micron size fractions). To be able to generalize our results beyond the particular sample set studied, it is necessary to quantitatively identify the observed effects of space weathering and evaluate the processes involved. For this, it is necessary to know the chemistry of each size fraction, modal abundances of each phase, average compositions of the minerals and glasses, I(sub s)/FeO values, reflectance spectra, and the physical makeup of the individual particles and their patinas. This characterization includes the important dissection of the pyroxene minerals into four separate populations, with data on both modes and average chemical compositions. Armed with such data, it should be possible to effectively isolate spectral effects of space weathering from spectral properties related to mineral and glass chemistry. Four mare soils from the Apollo 17 site were selected for characterization based upon similarities in bulk composition and their contrasting maturities, ranging from immature to submature to mature. The methodology of our characterization has been discussed previously. Results of the Apollo 17 mare soils, outlined herein, are being prepared for publication in MAPS. As shown, with decreasing grain size, the agglutinitic (impact) glass content profoundly increases. This is the most impressive change for the mare soils. In several soils we have examined, there is an over two-fold increase in the agglutinitic glass contents between the 90-150- micron and the 10-20-micron size fractions. Accompanying this

Characterization of Soil Moisture Level for Rice and Maize Crops using GSM Shield and Arduino Microcontroller

NASA Astrophysics Data System (ADS)

Gines, G. A.; Bea, J. G.; Palaoag, T. D.

2018-03-01

Soil serves a medium for plants growth. One factor that affects soil moisture is drought. Drought has been a major cause of agricultural disaster. Agricultural drought is said to occur when soil moisture is insufficient to meet crop water requirements, resulting in yield losses. In this research, it aimed to characterize soil moisture level for Rice and Maize Crops using Arduino and applying fuzzy logic. System architecture for soil moisture sensor and water pump were the basis in developing the equipment. The data gathered was characterized by applying fuzzy logic. Based on the results, applying fuzzy logic in validating the characterization of soil moisture level for Rice and Maize crops is accurate as attested by the experts. This will help the farmers in monitoring the soil moisture level of the Rice and Maize crops.

Hydraulic characterization of a sealed loamy soil in a Mediterranean vineyard

NASA Astrophysics Data System (ADS)

Alagna, Vincenzo; Di Prima, Simone; Bagarello, Vincenzo; Guaitoli, Fabio; Iovino, Massimo; Keesstra, Saskia; Cerdà, Artemi

2017-04-01

Water infiltration measurements constitute a common way for an indirect characterization of sealed/crusted soils (Alagna et al., 2013). The Beerkan Estimation of Soil Transfer (BEST) parameters procedure by Lassabatere et al. (2006) is very attractive for practical use since it allows an estimation of both the soil water retention and hydraulic conductivity functions. The BEST method considers certain analytical formulae for the hydraulic characteristic curves and estimates their shape parameters, which are texture dependent, from particle-size analysis by physical-empirical pedotransfer functions. Structure dependent scale parameters are estimated by a beerkan experiment, i.e. a three-dimensional (3D) field infiltration experiment at ideally zero pressure head. BEST substantially facilitates the hydraulic characterization of unsaturated soils, and it is gaining popularity in soil science (Bagarello et al., 2014a; Di Prima, 2015; Di Prima et al., 2016b). Bagarello et al. (2014b) proposed a beerkan derived procedure to explain surface runoff and disturbance phenomena at the soil surface occurring during intense rainfall events. Di Prima et al. (2016a) applied this methodology in a vineyard with a sandy-loam texture. These authors compared this simple methodology with rainfall simulation experiments establishing a physical link between the two methodologies through the kinetic energy of the rainfall and the gravitational potential energy of the water used for the beerkan runs. They also indirectly demonstrated the occurrence of a certain degree of compaction and mechanical breakdown using a minidisk infiltrometer (Decagon, 2014). With this device, they reported a reduction of the unsaturated hydraulic conductivity by 2.3 times, due to the seal formation. The ability of the BEST method to distinguish between crusted and non-crusted soils was demonstrated by Souza et al. (2014). However, the potential of the beerkan runs to detect the effect of the seal on flow and

Characterization of the Resource Potential of Martian Soil using the Integrated Dust/Soil Experiment Package (IDEP)

NASA Technical Reports Server (NTRS)

Cooper, Bonnie L.; Mckay, David S.; Allen, Carlton C.; Hoffman, John H.; Gittleman, Mark E.

1997-01-01

The Integrated Dust/Soil Experiment Package (IDEP) is a suite of instruments that can detect and quantify the abundances of useful raw materials on Mars. We focus here on its capability for resource characterization in the martian soil; however, it is also capable of detecting and quantifying gases in the atmosphere. This paper describes the scientific rationale and the engineering design behind the IDEP.

Mineralogical and Chemical Characterization of Lunar Highland Regolith: Lessons Learned from Mare Soils

NASA Technical Reports Server (NTRS)

Taylor, L. A.; Cahill, J. T.; Patchen, A.; Pieters, C.; Morris, R.; Keller, L. P.; McKay, D. S.

2001-01-01

The Lunar Soil Characterization Consortium has begun study of the <45 m fractions of ten representative highland soils, chosen for their contrasting maturities. Difficulties are addressed in the modal and chemical analyses of these highland soils. Additional information is contained in the original extended abstract.

Notes: Water Flow and Chemical Retardation in Soils: A Simple Effective Laboratory Demonstration.

ERIC Educational Resources Information Center

Bowman, R. S.; And Others

1988-01-01

Describes a laboratory demonstration that illustrates principles of miscible displacement and chemical retardation in soils. Discusses how the experimental apparatus can be constructed from readily available materials. (TW)

Mineralogical and Chemical Characterization of Lunar Highland Soils: Insights into the Space Weathering of Soils on Airless Bodies

NASA Technical Reports Server (NTRS)

Taylor, Lawrence A.; Patchen, Allan; Taylor, Dong-Hwa S.; Pieters, Carle; Morris, Richard V.; Keller, Lindsay P.; McKay, David S.

2010-01-01

With reflectance spectroscopy, one is measuring only properties of the fine-grained regolith, most affected by space weathering. The Lunar Soil Characterization Consortium has undertaken the task of coordinated characterization of lunar soils, with respect to their mineralogical and chemical makeup. It is these lunar soils that are being used as "ground-truth" for all air30 less bodies. Modal abundances and chemistries of minerals and glasses in the finest size fractions (20-45, 10-20, and <10 microns) of four Apollo 14 and six Apollo 16 highland soils have been determined, as well as their bulk chemistry and IS/FeO values. Bi-directional reflectance measurements (0.3-2.6 microns) of all samples were performed in the RELAB. A significant fraction of nanophase Fe(sup 0) (np-Fe(sup 0)) appears to reside in agglutinitic glasses. However, as grain size of a soil decreases, the percentage of total iron present as np-Fe0 increases significantly, whereas the agglutinitic glass content rises only slightly; this is evidence for a large contribution to the IS/FeO values from the surface-correlated nanophase Fe(sup 0), particularly in the <10 micron size fraction. The compositions of the agglutinitic glasses in these fine fractions of the highland soils are different from the bulk-chemistry of that size; however, compositional trends of the glasses are not the same as those observed for mare soils. It is apparent that the glasses in the highland soils contain chemical components from outside their terrains. It is proposed that the Apollo 16 soils have been adulterated by the addition of impact-transported soil components from surrounding maria.

Screening and Characterization of Potentially Suppressive Soils against Gaeumannomyces graminis under Extensive Wheat Cropping by Chilean Indigenous Communities.

PubMed

Durán, Paola; Jorquera, Milko; Viscardi, Sharon; Carrion, Victor J; Mora, María de la Luz; Pozo, María J

2017-01-01

Wheat production around the world is severely compromised by the occurrence of "take-all" disease, which is caused by the soil-borne pathogen Gaeumannomyces graminis var. tritici (Ggt). In this context, suppressive soils are those environments in which plants comparatively suffer less soil-borne pathogen diseases than expected, owing to native soil microorganism activities. In southern Chile, where 85% of the national cereal production takes place, several studies have suggested the existence of suppressive soils under extensive wheat cropping. Thus, this study aimed to screen Ggt-suppressive soil occurrence in 16 locations managed by indigenous "Mapuche" communities, using extensive wheat cropping for more than 10 years. Ggt growth inhibition in vitro screenings allowed the identification of nine putative suppressive soils. Six of these soils, including Andisols and Ultisols, were confirmed to be suppressive, since they reduced take-all disease in wheat plants growing under greenhouse conditions. Suppressiveness was lost upon soil sterilization, and recovered by adding 1% of the natural soil, hence confirming that suppressiveness was closely associated to the soil microbiome community composition. Our results demonstrate that long-term extensive wheat cropping, established by small Mapuche communities, can generate suppressive soils that can be used as effective microorganism sources for take-all disease biocontrol. Accordingly, suppressive soil identification and characterization are key steps for the development of environmentally-friendly and efficient biotechnological applications for soil-borne disease control.

Soil Physical, Chemical, and Thermal Characterization, Teller Road Site, Seward Peninsula, Alaska, 2016

DOE Data Explorer

Graham, David; Kholodov, Alexander; Wilson, Cathy; Moon, Ji-Won; Romanovsky, Vladimir; Busey, Bob

2018-02-05

This dataset provides the results of physical, chemical, and thermal characterization of soils at the Teller Road Site, Seward Peninsula, Alaska. Soil pits were dug from 7-14 September 2016 at designated Intensive Stations 2 through 9 at the Teller Road MM 27 Site. This dataset includes field observations and descriptions of soil layers or horizons, field measurements of soil volumetric water content, soil temperature, thermal conductivity, and heat capacity. Laboratory measurements of soil properties include gravimetric water content, bulk density, volumetric water content, and total carbon and nitrogen.

Soil Physical, Chemical, and Thermal Characterization, Council Road Site, Seward Peninsula, Alaska, 2016

DOE Data Explorer

Alexander Kholodov; David Graham; Ji-Won Moon

2018-01-22

This dataset provides the results of physical, chemical, and thermal characterization of soils at the Council Road Site at MM71, Seward Peninsula, Alaska. Soil pits were dug on 11 September 2016 at three sites. This dataset includes field observations and descriptions of soil layers or horizons, field measurements of soil volumetric water content, soil temperature, thermal conductivity, and heat capacity. Laboratory measurements of soil properties include gravimetric water content, bulk density, volumetric water content, total carbon and nitrogen, and elemental composition from X-ray fluorescence for some elements.

Guidance: Demonstrating Compliance with the Land Disposal Restrictions (LDR) Alternative Soil Treatment Standards

EPA Pesticide Factsheets

This guidance provides suggestions and perspectives on how members of the regulated community, states, and the public can demonstrate compliance with the alternative treatment standards for certain contaminated soils that will be land disposed.

Screening and Characterization of Potentially Suppressive Soils against Gaeumannomyces graminis under Extensive Wheat Cropping by Chilean Indigenous Communities

PubMed Central

Durán, Paola; Jorquera, Milko; Viscardi, Sharon; Carrion, Victor J.; Mora, María de la Luz; Pozo, María J.

2017-01-01

Wheat production around the world is severely compromised by the occurrence of “take-all” disease, which is caused by the soil-borne pathogen Gaeumannomyces graminis var. tritici (Ggt). In this context, suppressive soils are those environments in which plants comparatively suffer less soil-borne pathogen diseases than expected, owing to native soil microorganism activities. In southern Chile, where 85% of the national cereal production takes place, several studies have suggested the existence of suppressive soils under extensive wheat cropping. Thus, this study aimed to screen Ggt-suppressive soil occurrence in 16 locations managed by indigenous “Mapuche” communities, using extensive wheat cropping for more than 10 years. Ggt growth inhibition in vitro screenings allowed the identification of nine putative suppressive soils. Six of these soils, including Andisols and Ultisols, were confirmed to be suppressive, since they reduced take-all disease in wheat plants growing under greenhouse conditions. Suppressiveness was lost upon soil sterilization, and recovered by adding 1% of the natural soil, hence confirming that suppressiveness was closely associated to the soil microbiome community composition. Our results demonstrate that long-term extensive wheat cropping, established by small Mapuche communities, can generate suppressive soils that can be used as effective microorganism sources for take-all disease biocontrol. Accordingly, suppressive soil identification and characterization are key steps for the development of environmentally-friendly and efficient biotechnological applications for soil-borne disease control. PMID:28861064

Field Demonstration of Acetone Pretreatment and Composting of Particulate-TNT-Contaminated Soil

DOE Office of Scientific and Technical Information (OSTI.GOV)

Radtke, Corey William; Smith, D.; Owen, S.

2002-02-01

Solid fragments of explosives in soil are common in explosives testing and training areas. In this study we initially sieved the upper 6 in of contaminated soil through a 3-mm mesh, and found 2, 4, 6-trinitrotoluene (TNT) fragments. These contributed to an estimated concentration of 1.7 kg per cubic yard soil, or for 2000 ppm TNT in the soil. Most of the fragments ranged 4 mm to 10 mm diameter in size, but explosives particles weighing up to 56 g (about 4 cm diameter) were frequently observed. An acetone pretreatment/composting system was then demonstrated at field scale. The amount ofmore » acetone required for a TNT-dissolving slurry process was controlled by the viscosity of the soil/acetone mix rather than the TNT dissolution rate. The amount needed was estimated at about 55 gallons acetone per cubic yard soil. Smaller, 5- to 10-mm-diameter fragments went into solution in less than 15 min at a mixer speed of 36 rpm, with a minimum of 2 g TNT going into solution per 30 min for the larger chunks. The slurries were than mixed with compost starting materials and composted in a vented 1 yd3 container. After 34 days incubation time TNT was below the site-specific regulatory threshold of 44 ppm. TNT metabolites and acetone were also below their regulatory thresholds established for the site.« less

Characterization of Minerals: From the Classroom to Soils to Talc Deposits

ERIC Educational Resources Information Center

McNamee, Brittani D.

2013-01-01

This dissertation addresses different methods and challenges surrounding characterizing and identifying minerals in three environments: in the classroom, in soils, and in talc deposits. A lab manual for a mineralogy and optical mineralogy course prepares students for mineral characterization and identification by giving them the methods and tools…

Environmental technology demonstrations involving explosives contamination at the Volunteer Site

DOE Office of Scientific and Technical Information (OSTI.GOV)

Walker, A.J.; Broder, M.F.; Jayne, E.A.

1997-08-01

Managed by the US Army Environmental Center, the Army`s test site at Volunteer Army Ammunition Plant encompasses a 300-acre area formerly used for batch production of TNT. Soil and groundwater contamination in the test area is well characterized. A network of monitoring wells and detailed information regarding the volume, location, and concentration of soil contamination is available to potential demonstrators. On-site field and laboratory support is provided by ICI Americas Incorporated, the facility`s operator. Four demonstrations have been conducted at the test site and several are scheduled for 1997. Preliminary findings from the four demonstrations discussed will be available sometimemore » in 1997.« less

Isolation and Characterization of Alfalfa-Nodulating Rhizobia Present in Acidic Soils of Central Argentina and Uruguay

PubMed Central

del Papa, María F.; Balagué, Laura J.; Sowinski, Susana Castro; Wegener, Caren; Segundo, Eduardo; Abarca, Francisco Martínez; Toro, Nicolás; Niehaus, Karsten; Pühler, Alfred; Aguilar, O. Mario; Martínez-Drets, Gloria; Lagares, Antonio

1999-01-01

We describe the isolation and characterization of alfalfa-nodulating rhizobia from acid soils of different locations in Central Argentina and Uruguay. A collection of 465 isolates was assembled, and the rhizobia were characterized for acid tolerance. Growth tests revealed the existence of 15 acid-tolerant (AT) isolates which were able to grow at pH 5.0 and formed nodules in alfalfa with a low rate of nitrogen fixation. Analysis of those isolates, including partial sequencing of the genes encoding 16S rRNA and genomic PCR-fingerprinting with MBOREP1 and BOXC1 primers, demonstrated that the new isolates share a genetic background closely related to that of the previously reported Rhizobium sp. Or191 recovered from an acid soil in Oregon (B. D. Eardly, J. P. Young, and R. K. Selander, Appl. Environ. Microbiol. 58:1809–1815, 1992). Growth curves, melanin production, temperature tolerance, and megaplasmid profiles of the AT isolates were all coincident with these characteristics in strain Or191. In addition to the ability of all of these strains to nodulate alfalfa (Medicago sativa) inefficiently, the AT isolates also nodulated the common bean and Leucaena leucocephala, showing an extended host range for nodulation of legumes. In alfalfa, the time course of nodule formation by the AT isolate LPU 83 showed a continued nodulation restricted to the emerging secondary roots, which was probably related to the low rate of nitrogen fixation by the largely ineffective nodules. Results demonstrate the complexity of the rhizobial populations present in the acidic soils represented by a main group of N2-fixing rhizobia and a second group of ineffective and less-predominant isolates related to the AT strain Or191. PMID:10103231

X-231B technology demonstration for in situ treatment of contaminated soil: Contaminant characterization and three dimensional spatial modeling

DOE Office of Scientific and Technical Information (OSTI.GOV)

West, O.R.; Siegrist, R.L.; Mitchell, T.J.

1993-11-01

Fine-textured soils and sediments contaminated by trichloroethylene (TCE) and other chlorinated organics present a serious environmental restoration challenge at US Department of Energy (DOE) sites. DOE and Martin Marietta Energy Systems, Inc. initiated a research and demonstration project at Oak Ridge National Laboratory. The goal of the project was to demonstrate a process for closure and environmental restoration of the X-231B Solid Waste Management Unit at the DOE Portsmouth Gaseous Diffusion Plant. The X-231B Unit was used from 1976 to 1983 as a land disposal site for waste oils and solvents. Silt and clay deposits beneath the unit were contaminatedmore » with volatile organic compounds and low levels of radioactive substances. The shallow groundwater was also contaminated, and some contaminants were at levels well above drinking water standards. This document begins with a summary of the subsurface physical and contaminant characteristics obtained from investigative studies conducted at the X-231B Unit prior to January 1992 (Sect. 2). This is then followed by a description of the sample collection and analysis methods used during the baseline sampling conducted in January 1992 (Sect. 3). The results of this sampling event were used to develop spatial models for VOC contaminant distribution within the X-231B Unit.« less

Spatial characterization of soil properties and influence in soil formation in oak-grassland of Sierra Morena, S Spain

NASA Astrophysics Data System (ADS)

Román-Sánchez, Andrea; Cáceres, Francisco; Pédèches, Remi; Giráldez Cervera, Juan Vicente; Vanwalleghem, Tom

2016-04-01

The Mediterranean oak-grassland ecosystem is very important for the rural economy and for the biodiversity of south-western European countries like Spain and Portugal. Nevertheless these ecosystems are not well characterized especially their soils. In this report soil carbon has been evaluated and related to other properties. The principal factors controlling the structure, productivity and evolution of forest ecosystems are bedrock, climate, relief, vegetation and time. Soil carbon has an important influence in the soil and ecosystem structures. The purpose of this study is to determine the relationship between relief, soil properties, spatial distribution of soil carbon and their influence in soil formation and geomorphology. This work is part of another study which aims to elucidate the processes involved in the soil formation and to examine their behaviour on long-term with a modelling. In our study area, located in oak-grassland of Sierra Morena, in Cordoba, S Spain, have been studied 67 points at 6 depths in 262 hectares in order to determine carbon content varying between 0-6%, soil properties such as soil depth between 0-4 m, horizon depth and the rocks amount in surface. The relationship between the soil carbon, soil properties and the relief characteristic like slope, aspect, curvature can shed light the processes that affect the mechanisms of bedrock weathering and their interrelationship with geomorphological processes.

Soils in our big back yard: characterizing the state, vulnerabilities, and opportunities for detecting changes in soil carbon storage

NASA Astrophysics Data System (ADS)

Harden, Jennifer W.; Loiesel, Julie; Ryals, Rebecca; Lawrence, Corey; Blankinship, Joseph; Phillips, Claire; Bond-Lamberty, Ben; Todd-Brown, Katherine; Vargas, Rodrigo; Hugelius, Gustaf; Nave, Luke; Malhotra, Avni; Silver, Whendee; Sanderman, Jon

2017-04-01

A number of diverse approaches and sciences can contribute to a robust understanding of the I. state, II. vulnerabilities, and III. opportunities for soil carbon in context of its potential contributions to the atmospheric C budget. Soil state refers to the current C stock of a given site, region, or ecosystem/landuse type. Soil vulnerabilities refers to the forms and bioreactivity of C stocks, which determine how soil C might respond to climate, disturbance, and landuse perturbations. Opportunities refer to the potential for soils in their current state to increase capacity for and rate of C storage under future conditions, thereby impacting atmospheric C budgets. In order to capture the state, vulnerability, and opportunities for soil C, a robust C accounting scheme must include at least three science needs: (1) a user-friendly and dynamic database with transparent, shared coding in which data layers of solid, liquid, and gaseous phases share relational metadata and allow for changes over time (2) a framework to characterize the capacity and reactivity of different soil types based on climate, historic, and landscape factors (3) a framework to characterize landuse practices and their impact on physical state, capacity/reactivity, and potential for C change. In order to transfer our science information to practicable implementations for land policies, societal and social needs must also include: (1) metrics for landowners and policy experts to recognize conditions of vulnerability or opportunity (2)communication schemes for accessing salient outcomes of the science. Importantly, there stands an opportunity for contributions of data, model code, and conceptual frameworks in which scientists, educators, and decision-makers can become citizens of a shared, scrutinized database that contributes to a dynamic, improved understanding of our soil system.

DEMONSTRATION AND QUALITY ASSURANCE PROJECT PLAN: XRF TECHNOLOGIES OF MEASURING TRACE ELEMENTS IN SOIL AND SEDIMENT

EPA Science Inventory

A demonstration of field portable/mobile technologies for measuring trace elements in soil and sediments was conducted under the U.S. Environmental Protection Agency Superfund Innovative Technology Evaluation (SITE) Program. The demonstration took place from January 24 to 28, 200...

Geophysical characterization of soil moisture spatial patterns in a tillage experiment

NASA Astrophysics Data System (ADS)

Martinez, G.; Vanderlinden, K.; Giráldez, J. V.; Muriel, J. L.

2009-04-01

Knowledge on the spatial soil moisture pattern can improve the characterisation of the hydrological response of either field-plots or small watersheds. Near-surface geophysical methods, such as electromagnetic induction (EMI), provide a means to map such patterns using non-invasive and non-destructive measurements of the soil apparent electrical conductivity (ECa. In this study ECa was measured using an EMI sensor and used to characterize spatially the hydrologic response of a cropped field to an intense shower. The study site is part of a long-term tillage experiment in Southern Spain in which Conventional Tillage (CT), Direct Drilling (DD) and Minimum Tillage (MT) are being evaluated since 1982. Soil ECa was measured before and after a rain event of 115 mm, near the soil surface and at deeper depth (ECas and ECad, respectively) using the EM38-DD EMI sensor. Simultaneously, elevation data were collected at each sampling point to generate a Digital Elevation Model (DEM). Soil moisture during the first survey was close to permanent wilting point and near field capacity during the second survey. For the first survey, both ECas and ECad, were higher in the CT and MT than in the DD plots. After the rain event, rill erosion appeared only in CT and MT plots were soil was uncovered, matching the drainage lines obtained from the DEM. Apparent electrical conductivity increased all over the field plot with higher increments in the DD plots. These plots showed the highest ECas and ECad values, in contrast to the spatial pattern found during the first sampling. Difference maps obtained from the two ECas and ECad samplings showed a clear difference between DD plots and CT and MT plots due to their distinct hydrologic response. Water infiltration was higher in the soil of the DD plots than in the MT and CT plots, as reflected by their ECad increment. Higher ECa increments were observed in the depressions of the terrain, where water and sediments accumulated. On the contrary, the

Molecular characterization of soil bacterial community in a perhumid, low mountain forest.

PubMed

Lin, Yu-Te; Whitman, William B; Coleman, David C; Chih-Yu, Chiu

2011-01-01

Forest disturbance often results in changes in soil properties and microbial communities. In the present study, we characterized a soil bacterial community subjected to disturbance using 16S rRNA gene clone libraries. The community was from a disturbed broad-leaved, low mountain forest ecosystem at Huoshaoliao (HSL) located in northern Taiwan. This locality receives more than 4,000 mm annual precipitation, one of the highest precipitations in Taiwan. Based on the Shannon diversity index, Chao1 estimator, richness and rarefaction curve analysis, the bacterial community in HSL forest soils was more diverse than those previously investigated in natural and disturbed forest soils with colder or less humid weather conditions. Analysis of molecular variance also revealed that the bacterial community in disturbed soils significantly differed from natural forest soils. Most of the abundant operational taxonomic units (OTUs) in the disturbed soil community at HSL were less abundant or absent in other soils. The disturbances influenced the composition of bacterial communities in natural and disturbed forests and increased the diversity of the disturbed forest soil community. Furthermore, the warmer and humid weather conditions could also increase community diversity in HSL soils.

Interaction of Sr-90 with site candidate soil for demonstration disposal facility at Serpong

NASA Astrophysics Data System (ADS)

Setiawan, Budi; Mila, Oktri; Safni

2014-03-01

Interaction of radiostrontium (Sr-90) with site candidate soil for demonstration disposal facility to be constructed in the near future at Serpong has been done. This activity is to anticipate the interim storage facility at Serpong nuclear area becomes full off condition, and show to the public how radioactive waste can be well managed with the existing technology. To ensure that the location is save, a reliability study of site candidate soil becomes very importance to be conducted through some experiments consisted some affected parameters such as contact time, effect of ionic strength, and effect of Sr+ ion in solution. Radiostrontium was used as a tracer on the experiments and has role as radionuclide reference in low-level radioactive waste due to its long half-live and it's easy to associate with organism in nature. So, interaction of radiostrontium and soil samples from site becomes important to be studied. Experiment was performed in batch method, and soil sample-solution containing radionuclide was mixed in a 20 ml of PE vial. Ratio of solid: liquid was 10-2 g/ml. Objective of the experiment is to collect the specific characteristics data of radionuclide sorption onto soil from site candidate. Distribution coefficient value was used as indicator where the amount of initial and final activities of radiostrontium in solution was compared. Result showed that equilibrium condition was reached after contact time 10 days with Kd values ranged from 1600-2350 ml/g. Increased in ionic strength in solution made decreased of Kd value into soil sample due to competition of background salt and radiostrontium into soil samples, and increased in Sr ion in solution caused decreased of Kd value in soil sample due to limitation of sorption capacity in soil samples. Fast condition in saturated of metal ion into soil samples was reached due to a simple reaction was occurred.

Physical and chemical characterization of actinides in soil from Johnston Atoll

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wolf, S.F.; Bates, J.K.; Buck, E.C.

1997-02-01

Characterization of the actinide content of a sample of contaminated coral soil from Johnston Atoll, the site of three non-nuclear destructs of nuclear warhead-carrying THOR missiles in 1962, revealed that >99% of the total actinide content is associated with discrete bomb fragments. After removal of these fragments, there was an inverse correlation between actinide content and soil particle size in particles from 43 to 0.4 {mu}m diameter. Detailed analyses of this remaining soil revealed no discrete actinide phase in these soil particles, despite measurable actinide content. Observations indicate that exposure to the environment has caused the conversion of relatively insolublemore » actinide oxides to the more soluble actinyl oxides and actinyl carbonate coordinated complexes. This process has led to dissolution of actinides from discrete particles and migration to the surrounding soil surfaces, resulting in a dispersion greater than would be expected by physical transport of discrete particles alone. 26 refs., 4 figs., 1 tab.« less

Spatial variability structure of soil CO2 emission and soil physical and chemical properties characterized by fractal dimension in sugarcane areas

NASA Astrophysics Data System (ADS)

Bicalho, E. S.; Teixeira, D. B.; Panosso, A. R.; Perillo, L. I.; Iamaguti, J. L.; Pereira, G. T.; La Scala, N., Jr.

2012-04-01

Soil CO2 emission (FCO2) is influenced by chemical, physical and biological factors that affect the production of CO2 in the soil and its transport to the atmosphere, varying in time and space depending on environmental conditions, including the management of agricultural area. The aim of this study was to investigate the structure of spatial variability of FCO2 and soil properties by using fractal dimension (DF), derived from isotropic variograms at different scales, and construction of fractograms. The experimental area consisted of a regular grid of 60 × 60 m on sugarcane area under green management, containing 141 points spaced at minimum distances ranging from 0.5 to 10 m. Soil CO2 emission, soil temperature and soil moisture were evaluated over a period of 7 days, and soil chemical and physical properties were determined by sampling at a depth of 0.0 to 0.1 m. FCO2 showed an overall average of 1.51 µmol m-2 s-1, correlated significantly (p < 0.05) with soil physical factors such as soil bulk density, air-filled pore space, macroporosity and microporosity. Significant DF values were obtained in the characterization of FCO2 in medium and large scales (from 20 m). Variations in DF with the scale, which is the fractogram, indicate that the structure of FCO2 variability is similar to that observed for the soil temperature and total pore volume, and reverse for the other soil properties, except for macroporosity, sand content, soil organic matter, carbon stock, C/N ratio and CEC, which fractograms were not significantly correlated to the FCO2 fractogram. Thus, the structure of spatial variability for most soil properties, characterized by fractogram, presents a significant relationship with the structure of spatial variability of FCO2, generally with similar or dissimilar behavior, indicating the possibility of using the fractogram as tool to better observe the behavior of the spatial dependence of the variables along the scale.

Ecotoxicological characterization of sugarcane vinasses when applied to tropical soils.

PubMed

Alves, Paulo Roger L; Natal-da-Luz, Tiago; Sousa, José Paulo; Cardoso, Elke J B N

2015-09-01

The impact of sugarcane vinasse on soil invertebrates was assessed through ecotoxicological assays. Increasing concentrations of two vinasses from different distillery plants (VA and VB), and a vinasse from a laboratory production (VC), were amended on two natural tropical Oxisols (LV and LVA) and a tropical artificial soil (TAS) to characterize the effects of the vinasses on earthworms (Eisenia andrei), enchytraeids (Enchytraeus crypticus), mites (Hypoaspis aculeifer) and collembolans (Folsomia candida). The highest concentrations of VA and VB were avoided by earthworms in all soils and by collembolans especially in the natural soils. The presence of VC in all of the tested soils did not cause avoidance behavior in these species. The reproduction of earthworms, enchytraeids and collembolans was decreased in the highest concentrations of VA and VB in the natural soils. In TAS, VB reduced the reproduction of all test species, whereas VA was toxic exclusively to E. andrei and E. crypticus. The vinasse VC only reduced the number of earthworms in TAS and enchytraeids in LVA. The reproduction of mites was reduced by VB in TAS. Vinasses from distillery plants were more toxic than the vinasse produced in laboratory. The vinasse toxicities were influenced by soil type, although this result was most likely because of the way the organisms are exposed to the contaminants in the soils. Toxicity was attributed to the vinasses' high salt content and especially the high potassium concentrations. Data obtained in this study highlights the potential risk of vinasse disposal on tropical soils to soil biota. The toxic values estimated are even more relevant when considering the usual continuous use of vinasses in crop productions. Copyright © 2015 Elsevier B.V. All rights reserved.

Chemical and microbiological characterization of an aged PCB-contaminated soil.

PubMed

Stella, T; Covino, S; Burianová, E; Filipová, A; Křesinová, Z; Voříšková, J; Větrovský, T; Baldrian, P; Cajthaml, T

2015-11-15

This study was aimed at complex characterization of three soil samples (bulk soil, topsoil and rhizosphere soil) from a site historically contaminated with polychlorinated biphenyls (PCB). The bulk soil was the most highly contaminated, with a PCB concentration of 705.95 mg kg(-1), while the rhizosphere soil was the least contaminated (169.36 mg kg(-1)). PCB degradation intermediates, namely chlorobenzoic acids (CBAs), were detected in all the soil samples, suggesting the occurrence of microbial transformation processes over time. The higher content of organic carbon in the topsoil and rhizosphere soil than in the bulk soil could be linked to the reduced bioaccessibility (bioavailability) of these chlorinated pollutants. However, different proportions of the PCB congener contents and different bioaccessibility of the PCB homologues indicate microbial biotransformation of the compounds. The higher content of organic carbon probably also promoted the growth of microorganisms, as revealed by phospholipid fatty acid (PFLA) quantification. Tag-encoded pyrosequencing analysis showed that the bacterial community structure was significantly similar among the three soils and was predominated by Proteobacteria (44-48%) in all cases. Moreover, analysis at lower taxonomic levels pointed to the presence of genera (Sphingomonas, Bulkholderia, Arthrobacter, Bacillus) including members with reported PCB removal abilities. The fungal community was mostly represented by Basidiomycota and Ascomycota, which accounted for >80% of all the sequences detected in the three soils. Fungal taxa with biodegradation potential (Paxillus, Cryptococcus, Phoma, Mortierella) were also found. These results highlight the potential of the indigenous consortia present at the site as a starting point for PCB bioremediation processes. Copyright © 2015 Elsevier B.V. All rights reserved.

Evaluation and characterization of thyroid-disrupting activities in soil samples along the Second Songhua River, China.

PubMed

Kong, Dongdong; Wang, Yafei; Wang, Jinsheng; Teng, Yanguo; Li, Na; Li, Jian

2016-11-01

In this study, a recombinant thyroid receptor (TR) gene yeast assay combined with Monte Carlo simulation were used to evaluate and characterize soil samples collected from Jilin (China) along the Second Songhua River, for their ant/agonist effect on TR. No TR agonistic activity was found in soils, but many soil samples exhibited TR antagonistic activities, and the bioassay-derived amiodarone hydrochloride equivalents, which was calculated based on Monte Carlo simulation, ranged from not detected (N.D.) to 35.5μg/g. Hydrophilic substance fractions were determined to be the contributors to TR antagonistic activity in these soil samples. Our results indicate that the novel calculation method is effective for the quantification and characterization of TR antagonists in soil samples, and these data could provide useful information for future management and remediation efforts for contaminated soils. Copyright © 2016 Elsevier Inc. All rights reserved.

Characterizing effects of wind erosion on soil microtopography in a semiarid grassland using terrestrial laser scanning

NASA Astrophysics Data System (ADS)

Li, J.; Washington-Allen, R. A.; Okin, G. S.

2010-12-01

Aeolian processes play important roles in microtopography and associated soil-plant interactions in arid and semiarid landscapes. Most previous research has focused on scales larger than plant-interspaces and the dynamics of “fertile islands” associated with individual shrubs. Arid and semiarid ecosystems are notoriously heterogeneous in both microtopography and soil nutrients, and investigations of soil topography and plant-soil interactions at much finer scales (e.g., a few millimeters) are difficult using traditional point based sampling methods. Terrestrial laser scanners (TLS) are novel tools for which techniques can be developed to accurately characterize micro-scale topography with a spot diameter of 4.5 mm, and 2 mm ranging accuracy at 50 kHz. In this study, we employed a portable TLS (a Leica ScanStation 2) to digitally capture the 3-dimensional soil microtopography in a Chihuahuan desert grassland located in southern New Mexico. Soil surface on this site had been exposed to enhanced wind erosion since the spring of 2004. A control plot, located adjacent to the wind erosion plot, was also scanned to provide soil microtopography bench mark. A nearest neighbor interpolation was used on the elevation point clouds to yield bare ground, vegetation, and combined digital surface models for both plots. Additionally, measures of height and foliage diversity, vegetation and bare ground cover, and surface roughness were calculated. The results from this field study clearly demonstrate that TLS can provide insights on changes in microtopography affected by aeolian processes. Moreover, within the known distribution of soil nutrients, the 3D surface model of the soil microtopography provided unprecedented detail on the distribution of “mini” fertile islands associated with topography that were not revealed by studies at plant-interspace scale.

DEMONSTRATION BULLETIN: SOIL/SEDIMENT WASHING SYSTEM BERGMANN USA

EPA Science Inventory

The Bergmann USA Soil/Sediment Washing System is a waste minimization technique designed to separate or "partition" soils and sediments by grain size and density. In this water-based volume reduction process, hazardous contaminants are concentrated into a small residual portion...

Comparative characterization of sewage sludge compost and soil: Heavy metal leaching characteristics.

PubMed

Fang, Wen; Wei, Yonghong; Liu, Jianguo

2016-06-05

The leaching and accumulation of heavy metals are major concerns following the land application of sewage sludge compost (SSC). We comparatively characterized SSC, the reference soil, and the SSC amended soil to investigate their similarities and differences regarding heavy metal leaching behavior and then to evaluate the effect of SSC land application on the leaching behavior of soil. Results showed that organic matter, including both of particulate organic matter (POM) and dissolved organic matter (DOM), were critical factors influencing heavy metal leaching from both of SSC and the soil. When SSC was applied to soil at the application rate of 48t/ha, the increase of DOM content slightly enhanced heavy metal leaching from the amended soil over the applicable pH domain (6soil and the amended soil. Copyright © 2016 Elsevier B.V. All rights reserved.

Health risk characterization of maximum legal exposures for persistent organic pollutant (POP) pesticides in residential soil: An analysis.

PubMed

Li, Zijian

2018-01-01

Regulations for pesticides in soil are important for controlling human health risk; humans can be exposed to pesticides by ingesting soil, inhaling soil dust, and through dermal contact. Previous studies focused on analyses of numerical standard values for pesticides and evaluated the same pesticide using different standards among different jurisdictions. To understand the health consequences associated with pesticide soil standard values, lifetime theoretical maximum contribution and risk characterization factors were used in this study to quantify the severity of damage using disability-adjusted life years (DALYs) under the maximum "legal" exposure to persistent organic pollutant (POP) pesticides that are commonly regulated by the Stockholm Convention. Results show that computed soil characterization factors for some pesticides present lognormal distributions, and some of them have DALY values higher than 1000.0 per million population (e.g., the DALY for dichlorodiphenyltrichloroethane [DDT] is 14,065 in the Netherlands, which exceeds the tolerable risk of uncertainty upper bound of 1380.0 DALYs). Health risk characterization factors computed from national jurisdictions illustrate that values can vary over eight orders of magnitude. Further, the computed characterization factors can vary over four orders of magnitude within the same national jurisdiction. These data indicate that there is little agreement regarding pesticide soil regulatory guidance values (RGVs) among worldwide national jurisdictions or even RGV standard values within the same jurisdiction. Among these POP pesticides, lindane has the lowest median (0.16 DALYs) and geometric mean (0.28 DALYs) risk characterization factors, indicating that worldwide national jurisdictions provide relatively conservative soil RGVs for lindane. In addition, we found that some European nations and members of the former Union of Soviet Socialist Republics share the same pesticide RGVs and data clusters for the

Characterization of soil nematode communities in three cropping systems through morphological and DNA metabarcoding approaches

USDA-ARS?s Scientific Manuscript database

Communities of soil nematodes impact ecosystem functions, including plant growth, decomposition, and nutrient cycling, all of which are vital processes in agriculture. We used complementary morphological and DNA metabarcoding analyses to characterize soil nematode communities in three cropping syste...

Site and soil characterization of hazardous waste sites using an expert system guide

NASA Astrophysics Data System (ADS)

Cameron, Roy E.

1993-03-01

An expert system guide (knowledge book) has been devised to assist field personnel who must identify, describe, sample, and interpret size and soil characteristics of hazardous waste sites. The guide takes an approach that will be unfamiliar to most soil and environmental scientists and is directed to on-scene coordinators and project managers and others who may have little soil science training. It meets the need of the U.S. Environmental Protection Agency for standard procedures, guidelines, or protocols that address soil and site contamination, particularly heavy metals. The guide is organized to include: (1) general considerations and processes for collecting and using site and soils data, (2) detailed knowledge frames (descriptive profiles) of likely site and soil conditions, (3) a citation of references, (4) an appendix listing common sources of characterization data, and (5) a glossary of more than 900 general definitions.

Physicochemical Characterization of Potential Mobile Organic Matter In Five Typical German Agricultural Soils

NASA Astrophysics Data System (ADS)

Séquaris, J.-M.; Lewandowski, H.; Vereecken, H.

Organic matter (OM) in soils plays an important role, i.e., in maintaining soil structure or as source of nutrients. OM is mainly adsorbed at the surface of clay minerals and oxides and remains mostly immobile. However, mobile OM in dissolved form (DOM) or associated with water dispersible colloids (WDC) in soil water may influence trans- port of pollutants. The goal of this study is to compare 5 typical German agricultural soils in terms of distribution and quality of OM in the top soil (0-15 cm). The present report focuses on the physicochemical characterization of potential mobile OM so- lutions obtained after physical fractionation of soil materials based on sedimentation after a prolonged shaking in water or electrolyte solutions. Three soil fractions dif- fering in particle size were separated in function of sedimentation time: a colloidal fraction: < 2 ţm; a microaggregate fraction: 2-20 ţm and a sediment fraction: > 20 ţm. The soil electrolyte phase containing the DOM fraction was obtained by a high-speed centrifugation of the colloidal phase. After a water or low electrolyte concentration (« 1 mM Ca2+) extraction, it can be shown that the mobile fraction of OM or OC (organic carbon) is distributed between the colloidal and the electrolyte phases in a concentration ratio range of 10-40 to 1. A less mobile OC fraction is associated with the microaggregate fraction while immobile OC remains adsorbed in the sediment fraction. An increasing OC and total-N content with diminishing particle-size of soil (colloidal and microaggregate fractions) has been confirmed. A higher OC input due to special soil management is sensitively detected in fractions with a greater particle size (sediment fraction). Increasing the Ca2+ concentration up to 10 mM during the water extraction diminishes the DOC concentration by an average factor of 3 while the OC associated with the dispersed colloids (OCWDC) vanished almost completely. Thus, a critical coagulation concentration of

Characterization of extractable soil organic matter pools from African Dark Earths (AfDE): A case study in historical biochar and organic waste amendments

NASA Astrophysics Data System (ADS)

Fujiu, Manna; Plante, Alain; Ohno, Tsutomu; Solomon, Dawit; Lehmann, Johannes; Fraser, James; Leach, Melissa; Fairhead, James

2014-05-01

Anthropogenic Dark Earths are soils generated through long-term human inputs of organic and pyrogenic materials. These soils were originally discovered in the Amazon, and have since been found in Australia and in this case in Africa. African Dark Earths (AfDE) are black, highly fertile and carbon-rich soils that were formed from the original highly-weathered infertile yellowish to red Oxisols and Ultisols through an extant but hitherto overlooked climate-smart sustainable soil management system that has long been an important feature of the indigenous West African agricultural repertoire. Studies have demonstrated that ADE soils in general have significantly different organic matter properties compared to adjacent non-DE soils, largely attributable to the presence of high concentrations of ash-derived carbon. Quantification and characterization of bulk soil organic matter of several (n=11) AfDE and non-AfDE pairs of surface (0-15 cm) soils using thermal analysis techniques (TG-DSC-EGA) confirmed substantial differences in SOM composition and the presence of pyrogenic C. Such pyrogenic organic matter is generally considered recalcitrant or relatively stable, but the goal of the current study was to characterize the presumably labile, more rapidly cycling, pools of C in AfDEs through the characterization of hot water- and pyrophosphate-extractable fractions, referred to as HWEOC and PyroC respectively. Extracts were analyzed for carbon content, as well as composition using fluorescence (EEM/PARAFAC) and high resolution mass spectrometry (FTICR-MS). The amount of extractable C as a proportion of total soil C was relatively low: less than ~0.8% for HWEOC and 2.8% for PyroC. The proportion of HWEOC did not differ (P = 0.18, paired t-test) between the AfDE and the non-AfDE soils, while the proportions of PyroC were significantly larger (P = 0.001) in the AfDE soils compared to the non-AfDE soils. Preliminary analysis of the EEM/PARAFAC data suggests that AfDE samples had

Petrographic characterization of lunar soils: Application of x ray digital-imaging to quantitative and automated analysis

NASA Technical Reports Server (NTRS)

Higgins, Stefan J.; Patchen, Allan; Chambers, John G.; Taylor, Lawrence A.; Mckay, David S.

1994-01-01

The rocks and soils of the moon will be the raw materials for various engineering needs at a lunar base, such as sources of hydrogen, oxygen, metals, etc. The material of choice for most of the bulk needs is the regolith and its less than 1 cm fraction, the soil. For specific mineral resources it may be necessary to concentrate minerals from either rocks or soils. Therefore, quantitative characterizations of these rocks and soils are necessary in order to better define their mineral resource potential. However, using standard point-counting microscopic procedures, it is difficult to quantitatively determine mineral abundances and virtually impossible to obtain data on mineral distributions within grains. As a start to fulfilling these needs, Taylor et al. and Chambers et al. have developed a procedure for characterization of crushed lunar rocks using x ray digital imaging. The development of a similar digital imaging procedure for lunar soils as obtained from a spectrometer is described.

Natural radioactivity in soils of the state of Rio de Janeiro (Brazil): Radiological characterization and relationships to geological formation, soil types and soil properties.

PubMed

Ribeiro, F C A; Silva, J I R; Lima, E S A; do Amaral Sobrinho, N M B; Perez, D V; Lauria, D C

2018-02-01

Located in the south-western part of Brazil, the state of Rio de Janeiro is geotectonically contained within a complex structural province that resulted in the amalgamation of the Western Gondwana Paleocontinent. To undertake an extensive radiological characterization of this complex geological province and investigate the influence of bedrock, soil type and soil chemical-physical characteristics on natural radionuclide levels in soils, 259 surface soil samples were collected that encompassed the main soil types and geological formations throughout the state. Gamma spectrometry analysis of the samples resulted in median values of 114 Bq.kg -1 for 40 K, 32 Bq.kg -1 for 226 Ra and 74 Bq.kg -1 for 228 Ra. The median value for 226 Ra was similar to the world median value for soils, the 40 K value was well below the worldwide value, and that for 228 Ra exceeded the world median value. The intense weathering caused by the high rainfall rates and high temperatures may be responsible for the low levels of 40 K in the soils, of which the strongly acidic and clayey soils are markedly K-depleted. A soil from a high-grade metamorphic rock (granulite) presented the lowest 226 Ra (18 Bq.kg -1 ) content, whereas the highest levels for 226 Ra (92 Bq.kg -1 ) and 228 Ra (139 Bq.kg - 1) were observed in a young soil enriched in primary minerals (Leptsol). A lowland soil (Gleysol) showed the highest median of 40 K (301 Bq.kg -1 ). Strongly acidic soils tended to present high amounts of 226 Ra, and sandy soils tended to contain low levels of 228 Ra. The external radiation dose indicates that the state has a background radiation level within the natural range. Copyright © 2017 Elsevier Ltd. All rights reserved.

Characterizing regional soil mineral composition using spectroscopyand geostatistics

USGS Publications Warehouse

Mulder, V.L.; de Bruin, S.; Weyermann, J.; Kokaly, Raymond F.; Schaepman, M.E.

2013-01-01

This work aims at improving the mapping of major mineral variability at regional scale using scale-dependent spatial variability observed in remote sensing data. Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) data and statistical methods were combined with laboratory-based mineral characterization of field samples to create maps of the distributions of clay, mica and carbonate minerals and their abundances. The Material Identification and Characterization Algorithm (MICA) was used to identify the spectrally-dominant minerals in field samples; these results were combined with ASTER data using multinomial logistic regression to map mineral distributions. X-ray diffraction (XRD)was used to quantify mineral composition in field samples. XRD results were combined with ASTER data using multiple linear regression to map mineral abundances. We testedwhether smoothing of the ASTER data to match the scale of variability of the target sample would improve model correlations. Smoothing was donewith Fixed Rank Kriging (FRK) to represent the mediumand long-range spatial variability in the ASTER data. Stronger correlations resulted using the smoothed data compared to results obtained with the original data. Highest model accuracies came from using both medium and long-range scaled ASTER data as input to the statistical models. High correlation coefficients were obtained for the abundances of calcite and mica (R2 = 0.71 and 0.70, respectively). Moderately-high correlation coefficients were found for smectite and kaolinite (R2 = 0.57 and 0.45, respectively). Maps of mineral distributions, obtained by relating ASTER data to MICA analysis of field samples, were found to characterize major soil mineral variability (overall accuracies for mica, smectite and kaolinite were 76%, 89% and 86% respectively). The results of this study suggest that the distributions of minerals and their abundances derived using FRK-smoothed ASTER data more closely match the spatial

Demonstration/Validation of Incremental Sampling at Two Diverse Military Ranges and Development of an Incremental Sampling Tool

DTIC Science & Technology

2010-06-01

Sampling (MIS)? • Technique of combining many increments of soil from a number of points within exposure area • Developed by Enviro Stat (Trademarked...Demonstrating a reliable soil sampling strategy to accurately characterize contaminant concentrations in spatially extreme and heterogeneous...into a set of decision (exposure) units • One or several discrete or small- scale composite soil samples collected to represent each decision unit

Tank 241-AX-104 upper vadose zone cone penetrometer demonstration sampling and analysis plan

DOE Office of Scientific and Technical Information (OSTI.GOV)

FIELD, J.G.

1999-02-02

This sampling and analysis plan (SAP) is the primary document describing field and laboratory activities and requirements for the tank 241-AX-104 upper vadose zone cone penetrometer (CP) demonstration. It is written in accordance with Hanford Tank Initiative Tank 241-AX-104 Upper Vadose Zone Demonstration Data Quality Objective (Banning 1999). This technology demonstration, to be conducted at tank 241-AX-104, is being performed by the Hanford Tanks Initiative (HTI) Project as a part of Tank Waste Remediation System (TWRS) Retrieval Program (EM-30) and the Office of Science and Technology (EM-50) Tanks Focus Area. Sample results obtained as part of this demonstration will providemore » additional information for subsequent revisions to the Retrieval Performance Evaluation (RPE) report (Jacobs 1998). The RPE Report is the result of an evaluation of a single tank farm (AX Tank Farm) used as the basis for demonstrating a methodology for developing the data and analyses necessary to support making tank waste retrieval decisions within the context of tank farm closure requirements. The RPE includes a study of vadose zone contaminant transport mechanisms, including analysis of projected tank leak characteristics, hydrogeologic characteristics of tank farm soils, and the observed distribution of contaminants in the vadose zone in the tank farms. With limited characterization information available, large uncertainties exist as to the nature and extent of contaminants that may exist in the upper vadose zone in the AX Tank Farm. Traditionally, data has been collected from soils in the vadose zone through the installation of boreholes and wells. Soil samples are collected as the bore hole is advanced and samples are screened on site and/or sent to a laboratory for analysis. Some in-situ geophysical methods of contaminant analysis can be used to evaluate radionuclide levels in the soils adjacent to an existing borehole. However, geophysical methods require compensation for

Nutrient Characterization of Rainwater, Soil and Groundwater from Two Different Watersheds, Lake Taihu, China

NASA Astrophysics Data System (ADS)

Thaw, M.; Gao, F.; Yu, Z.; Acharya, K.

2012-12-01

Over the past two decades, an increase of nutrients to Lake Taihu, China has resulted in hyper-eutrophication and the production of severe cyanobacterial blooms. While many past studies have focused on how surface water transports nutrients to the lake, this study seeks to characterize the concentration of nutrients in different media, including rainwater, soil and groundwater from two different watersheds. These two watersheds varied in overall land use, and agricultural sites within each watershed varied by crop type and growing method. Samples were collected from the Meilin watershed, a mix of forest and agricultural land and the Zhangjiagang watershed, which consisted of industrial, urban and agricultural lands. Samples included soils, groundwater and rain water. Soils from each site were characterized by aggregate size class and analyzed for total nitrogen and total phosphorus. Rainwater and groundwater samples were analyzed for total nitrogen and total phosphorus.

Characterizing Zinc Speciation in Soils from a Smelter-Affected Boreal Forest Ecosystem.

PubMed

Hamilton, Jordan G; Farrell, Richard E; Chen, Ning; Feng, Renfei; Reid, Joel; Peak, Derek

2016-03-01

HudBay Minerals, Inc., has mined and/or processed Zn and Cu ore in Flin Flon, MB, Canada, since the 1930s. The boreal forest ecosystem and soil surrounding these facilities have been severely impacted by mixed metal contamination and HSO deposition. Zinc is one of the most prevalent smelter-derived contaminants and has been identified as a key factor that may be limiting revegetation. Metal toxicity is related to both total concentrations and speciation; therefore, X-ray absorption spectroscopy and X-ray fluorescence mapping were used to characterize Zn speciation in soils throughout the most heavily contaminated areas of the landscape. Zinc speciation was linked to two distinct soil types. Group I soils consist of exposed soils in weathered positions of bedrock outcrops with Zn present primarily as franklinite, a (ZnFeO) spinel mineral. Group II soils are stabilized by an invasive metal-tolerant grass species, with Zn found as a mixture of octahedral (Fe oxides) and tetrahedral Mn oxides) adsorption complexes with a franklinite component. Soil erosion influences Zn speciation through the redistribution of Zn and soil particulates from Group I landscape positions to Group II soils. Despite Group II soils having the highest concentrations of CaCl-extractable Zn, they support metal-tolerant plant growth. The metal-tolerant plants are probably preferentially colonizing these areas due to better soil and nutrient conditions as a result of soil deposition from upslope Group I areas. Zinc concentration and speciation appears to not influence the colonization by metal-tolerant grasses, but the overall soil properties and erosion effects prevent the revegetation by native boreal forest species. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

Integrated use of soil physical and water isotope methods for ecohydrological characterization of desertified areas

NASA Astrophysics Data System (ADS)

Külls, Christoph; Nunes, Alice; Köbel-Batista, Melanie; Branquinho, Cristina; Bianconi, Nadja; Costantini, Eduardo

2014-05-01

Measures for monitoring desertification and soil degradation require a thorough understanding of soil physical properties and of the water balance in order to guide restoration efforts (Costantini et al. 2009). It is hypothesized that long term restoration success on degraded land depends on a series of interacting factors such as exposition, soil type, soil hydrology including lateral flow on hill-slope catenae. Recently, new soil water isotope measurement techniques have been developed (Garvelmann et al. 2012) that provide much faster and reliable stable water isotope profiles in soils. This technique yield information on groundwater recharge, soil water balance and on the origin of water available for plants, which in combination with conservative chemical tracers (chloride) can be validated. A multidisciplinary study including ecologists, soil physicists and hydrologists of the COST Action Desert Restoration Hub was carried out on four semi-arid sites in Portugal. A comparative characterization of soil physical parameters, soil water isotope and chloride profiles was performed in order to estimate pedoclimate, soil aridity, soil water balance and groundwater recharge. In combination with soil physical data a comprehensive and cross-validated characterization of pedoclimate and soil aridity was obtained. These indicators were then integrated and related to plant cover. The long-term rainfall of the four sites ranges from 512 to 638 mm, whereas air temperature is from 15.8 to 17.0°C. The De Martonne index of aridity spans from 19.3 to 24.6, pointing to semiarid to moderately arid climatic conditions. The long-term average number of days when the first 0.50 m of soil is dry ranges from 110 to 134, while the mean annual soil temperature at 0.50 m spans from 15.8 and 19.1°C. The studied profiles show different hydrological characteristics, in particular, the estimated hydraulic conductivity ranges from 0.1-1 to 10-100 µm/s. Three out of four profiles show a

Superfund Innovative Technology Evaluation - Demonstration Bulletin: In-Situ Soil Stabilization

EPA Science Inventory

In-situ stabilization technology immobilizes organics and inorganic compounds in wet or dry soils by using reagents (additives) to polymerize with the soils and sludges producing a cement-like mass. Two basic components of this technology are the Geo-Con/DSM Deep Soil Mixing Sy...

Following The Money: Characterizing the Dynamics of Microbial Ecosystems and Labile Organic Matter in Grassland Soils

NASA Astrophysics Data System (ADS)

Herbert, B. E.; McNeal, K. S.

2006-12-01

The dynamics of soil microbial ecosystems and labile fractions of soil organic matter in grasslands have important implications for the response of these critical ecosystems to perturbations. Organic, inorganic and genetic biomarkers in the solid (e.g. lipids, microbial DNA), liquid (e.g. porewater ions) or gaseous phases (e.g. carbon dioxide) have been used to characterize carbon cycling and soil microbial ecology. These proxies are generally limited in the amount of temporal information that they can provide (i.e., solid-phase proxies) or the amount of specific information they can provide about carbon sources or microbial community processes (e.g. inorganic gases). It is the aim of this research to validate the use of soil volatile organic carbon emissions (VOCs) as useful indicators of subsurface microbial community shifts and processes as a function of ecosystem perturbations. We present results of method validation using laboratory microcosm, where VOC metabolites as characterized by gas chromatography and mass spectrometry (GC-MS), were related to other proxies including carbon dioxide (CO2) via infra-red technology, and microbial community shifts as measured by Biolog© and fatty acid methyl ester (FAME) techniques. Experiments with soil collected from grasslands along the coastal margin region in southern Texas were preformed where environmental factors such as soil water content, soil type, and charcoal content are manipulated. Results indicate that over fifty identifiable VOC metabolites are produced from the soils, where many (~15) can be direct indicators of microbial ecology. Principle component analysis (PCA) evidences these trends through similar cluster patterns for the VOC results, the Biolog© results, and FAME. Regression analysis further shows that VOCs are significant (p < 0.05) indicators of microbial stress. Our results are encouraging that characterizing VOCs production in grassland soils are easy to measure, relatively inexpensive method

Isolation and characterization of Chilembwe and Sinda Rock Phosphate solubilizing soil microorganisms

USDA-ARS?s Scientific Manuscript database

This study was conducted to isolate and characterize soil microorganisms capable of solubilizing Chilembwe and Sinda rock phosphates readily available in Zambia. Single isolates were obtained by direct plating and enrichment cultures with succinate, cellulose and glucose as the carbon sources. Isola...

Laboratory-based characterization of plutonium in soil particles using micro-XRF and 3D confocal XRF

DOE PAGES

McIntosh, Kathryn Gallagher; Cordes, Nikolaus Lynn; Patterson, Brian M.; ...

2015-03-29

The investigation of plutonium (Pu) in a soil matrix is of interest in safeguards, nuclear forensics, and environmental remediation activities. The elemental composition of two plutonium contaminated soil particles was characterized nondestructively using a pair of micro X-ray fluorescence spectrometry (micro-XRF) techniques including high resolution X-ray (hiRX) and 3D confocal XRF. The three dimensional elemental imaging capability of confocal XRF permitted the identification two distinct Pu particles within the samples: one external to the Ferich soil matrix and another co-located with Cu within the soil matrix. The size and morphology of the particles was assessed with X-ray transmission microscopy andmore » micro X-ray computed tomography (micro-CT) providing complementary morphological information. Limits of detection for a 30 μm Pu particle are <10 ng for each of the XRF techniques. Ultimately, this study highlights the capability for lab-based, nondestructive, spatially resolved characterization of heterogeneous matrices on the micrometer scale with nanogram sensitivity.« less

Soil Moisture Memory in Climate Models

NASA Technical Reports Server (NTRS)

Koster, Randal D.; Suarez, Max J.; Zukor, Dorothy J. (Technical Monitor)

2000-01-01

Water balance considerations at the soil surface lead to an equation that relates the autocorrelation of soil moisture in climate models to (1) seasonality in the statistics of the atmospheric forcing, (2) the variation of evaporation with soil moisture, (3) the variation of runoff with soil moisture, and (4) persistence in the atmospheric forcing, as perhaps induced by land atmosphere feedback. Geographical variations in the relative strengths of these factors, which can be established through analysis of model diagnostics and which can be validated to a certain extent against observations, lead to geographical variations in simulated soil moisture memory and thus, in effect, to geographical variations in seasonal precipitation predictability associated with soil moisture. The use of the equation to characterize controls on soil moisture memory is demonstrated with data from the modeling system of the NASA Seasonal-to-Interannual Prediction Project.

Microbial Indicators of Soil Quality under Different Land Use Systems in Subtropical Soils

NASA Astrophysics Data System (ADS)

Maharjan, M.

2016-12-01

Land-use change from native forest to intensive agricultural systems can negatively impact numerous soil parameters. Understanding the effects of forest ecosystem transformations on markers of long-term soil health is particularly important in rapidly developing regions such as Nepal, where unprecedented levels of agriculturally-driven deforestation have occurred in recent decades. However, the effects of widespread land use changes on soil quality in this region have yet to be properly characterized. Microbial indicators (soil microbial biomass, metabolic quotient and enzymes activities) are particularly suited to assessing the consequences of such ecosystem disturbances, as microbial communities are especially sensitive to environmental change. Thus, the aim of this study was to assess the effect of land use system; i.e. forest, organic and conventional farming, on soil quality in Chitwan, Nepal using markers of microbial community size and activity. Total organic C and N contents were higher in organic farming compared with conventional farming and forest, suggesting higher nutrient retention and soil preservation with organic farming practices compared to conventional. These differences in soil composition were reflected in the health of the soil microbial communities: Organic farm soil exhibited higher microbial biomass C, elevated β-glucosidase and chitinase activities, and a lower metabolic quotient relative to other soils, indicating a larger, more active, and less stressed microbial community, respectively. These results collectively demonstrate that application of organic fertilizers and organic residues positively influence nutrient availability, with subsequent improvements in soil quality and productivity. Furthermore, the sensitivity of microbial indicators to different management practices demonstrated in this study supports their use as effective markers of ecosystem disturbance in subtropical soils.

Characterization of plasma sprayed and explosively consolidated simulated lunar soil

DOE Office of Scientific and Technical Information (OSTI.GOV)

Powell, S.J.; Inal, O.T.; Smith, M.F.

1997-06-01

Two methods for the use of lunar materials for the construction of shelters on the Moon are being proposed: explosive consolidation of the soil into structural components and plasma spraying of the soil to join components. The plasma-sprayed coating would also provide protection from the intense radiation. In this work, a mare simulant was plasma-sprayed onto a stainless steel substrate. Deposition of a 0.020 inch coating using power inputs of 23, 25, 27 and 29 kW were compared. Hardness of the coatings increased with each increase of power to the system, while porosity at the interface decreased. All coatings exhibitedmore » good adhesion. Simultaneously, an explosively consolidated sample was similarly characterized to afford a comparison of structural features associated with each mode of proposed use.« less

Geophysical and Geotechnical Characterization of Beta-1,3/1,6-glucan Biopolymer treated Soil

NASA Astrophysics Data System (ADS)

Chang, I.; Cho, G.

2012-12-01

Bacteria or microbes in soil excrete hydrocarbon (e.g. polysaccharide) by-products which are called biopolymers. These biopolymers (or sometime biofilms) recently begun to make a mark on soil erosion control, aggregate stabilization, and drilling enhancement. However, the biological effect on soil behavior (e.g. bio-clogging or bio-cementation) has been poorly understood. In this study, the bio-cementation and bio-clogging effect induced by the existence of β-1,3/1,6-glucan biopolymers in soil were evaluated through a series of geophysical and geotechnical characterization tests in laboratory. According to the experimental test results, as the β-1,3/1,6-glucan content in soil increases, the compressive strength and shear wave velocity increase (i.e., bio-cementation) while the hydraulic conductivity decreases (i.e., bio-clogging) but the electrical conductivity increases due to the high electrical conductivity characteristic of β-1,3/1,6-glucan fibers. Coefficient of consolidation variation with the increases of β-1,3/1,6-glucan content in soil. SEM image of β-1,3/1,6-glucan treated soil. Fibers are form matices with soil particles.

Characterization of the spatial variability of soil available zinc at various sampling densities using grouped soil type information.

PubMed

Song, Xiao-Dong; Zhang, Gan-Lin; Liu, Feng; Li, De-Cheng; Zhao, Yu-Guo

2016-11-01

The influence of anthropogenic activities and natural processes involved high uncertainties to the spatial variation modeling of soil available zinc (AZn) in plain river network regions. Four datasets with different sampling densities were split over the Qiaocheng district of Bozhou City, China. The difference of AZn concentrations regarding soil types was analyzed by the principal component analysis (PCA). Since the stationarity was not indicated and effective ranges of four datasets were larger than the sampling extent (about 400 m), two investigation tools, namely F3 test and stationarity index (SI), were employed to test the local non-stationarity. Geographically weighted regression (GWR) technique was performed to describe the spatial heterogeneity of AZn concentrations under the non-stationarity assumption. GWR based on grouped soil type information (GWRG for short) was proposed so as to benefit the local modeling of soil AZn within each soil-landscape unit. For reference, the multiple linear regression (MLR) model, a global regression technique, was also employed and incorporated the same predictors as in the GWR models. Validation results based on 100 times realization demonstrated that GWRG outperformed MLR and can produce similar or better accuracy than the GWR approach. Nevertheless, GWRG can generate better soil maps than GWR for limit soil data. Two-sample t test of produced soil maps also confirmed significantly different means. Variogram analysis of the model residuals exhibited weak spatial correlation, rejecting the use of hybrid kriging techniques. As a heuristically statistical method, the GWRG was beneficial in this study and potentially for other soil properties.

DEMONSTRATION BULLETIN: HYDRAULIC FRACTURING OF CONTAMINATED SOIL

EPA Science Inventory

Hydraulic fracturing is a physical process that creates fractures in silty clay soil to enhance its permeability. The technology, developed by the Risk Reduction Engineering Laboratory (RREL) and the University of Cincinnati, creates sand-filled horizontal fractures up to 1 in. i...

Effects of long-term soil and crop management on soil hydraulic properties for claypan soils

USDA-ARS?s Scientific Manuscript database

Regional and national soil maps have been developed along with associated soil property databases to assist users in making land management decisions based on soil characteristics. These soil properties include average values from soil characterization for each soil series. In reality, these propert...

Soil Characterization and Site Response of Marine and Continental Environments

NASA Astrophysics Data System (ADS)

Contreras-Porras, R. S.; Huerta-Lopez, C. I.; Martinez-Cruzado, J. A.; Gaherty, J. B.; Collins, J. A.

2009-05-01

An in situ soil properties study was conducted to characterize both site and shallow layer sediments under marine and continental environments. Data from the SCoOBA (Sea of Cortez Ocean Bottom Array) seismic experiment and in land ambient vibration measurements on the urban areas of Tijuana, B. C., and Ensenada, B. C., Mexico were used in the analysis. The goal of this investigation is to identify and to analyze the effect of the physical/geotechnical properties of the ground on the site response upon seismic excitations in both marine and continental environments. The time series were earthquakes and background noise recorded within interval of 10/2005 to 10/2006 in the Gulf of California (GoC) with very-broadband Ocean Bottom Seismographs (OBS), and ambient vibration measurements collected during different time periods on Tijuana and Ensenada urban areas. The data processing and analysis was conducted by means of the H/V Spectral Ratios (HVSPR) of multi component data, the Random Decrement Method (RDM), and Blind Deconvolution (BD). This study presents ongoing results of a long term project to characterize the local site response of soil layers upon dynamic excitations using digital signal processing algorithms on time series, as well as the comparison between the results these methodologies are providing.

Characterization studies and indicated remediation methods for plutonium contaminated soils at the Nevada Test Site

DOE Office of Scientific and Technical Information (OSTI.GOV)

Murarik, T.M.; Wenstrand, T.K.; Rogers, L.A.

An initial soil characterization study was conducted to help identify possible remediation methods to remove plutonium from the Nevada Test Site and Tonapah Test Range surface soils. Results from soil samples collected across various isopleths at five sites indicate that the size-fraction distribution patterns of plutonium remain similar to findings from the Nevada Applied Ecology Group (NAEG) (1970's). The plutonium remains in the upper 10--15 cm of soils, as indicated in previous studies. Distribution of fine particles downwind'' of ground zero at each site is suggested. Whether this pattern was established immediately after each explosion or this resulted from post-shotmore » wind movement of deposited material is unclear. Several possible soil treatment scenarios are presented. Removal of plutonium from certain size fractions of the soils would alleviate the sites of much of the plutonium burden. However, the nature of association of plutonium with soil components will determine which remediation methods will most likely succeed.« less

Characterization studies and indicated remediation methods for plutonium contaminated soils at the Nevada Test Site

DOE Office of Scientific and Technical Information (OSTI.GOV)

Murarik, T.M.; Wenstrand, T.K.; Rogers, L.A.

An initial soil characterization study was conducted to help identify possible remediation methods to remove plutonium from the Nevada Test Site and Tonapah Test Range surface soils. Results from soil samples collected across various isopleths at five sites indicate that the size-fraction distribution patterns of plutonium remain similar to findings from the Nevada Applied Ecology Group (NAEG) (1970`s). The plutonium remains in the upper 10--15 cm of soils, as indicated in previous studies. Distribution of fine particles ``downwind`` of ground zero at each site is suggested. Whether this pattern was established immediately after each explosion or this resulted from post-shotmore » wind movement of deposited material is unclear. Several possible soil treatment scenarios are presented. Removal of plutonium from certain size fractions of the soils would alleviate the sites of much of the plutonium burden. However, the nature of association of plutonium with soil components will determine which remediation methods will most likely succeed.« less

Characterizing Gas Transport in Wetland Soil-Root Systems with Dissolved Gas Tracer Techniques

NASA Astrophysics Data System (ADS)

Reid, M. C.; Jaffe, P. R.

2016-12-01

Soil fluxes of methane (CH4), nitrous oxide (N2O), and other biogenic gases depend on coupling between microbial and physiochemical processes within soil media. The importance of plant-mediated transport in wetland CH4 emissions is well known, but a generalized understanding of gas transfer between pore water and root aerenchyma, and how this process competes with biogeochemical production/consumption of gases beyond CH4, is incomplete [1]. A lack of experimental approaches to characterize transport processes in complex soil-water-plant systems at field scale has limited efforts to close this knowledge gap. In this presentation we describe dissolved gas tracer techniques to tease apart effects of transport from simultaneous biochemical reaction on trace gas dynamics in soils. We discuss a push-pull test with helium and sulfur hexafluoride gas tracers to quantify in situ root-mediated gas transfer kinetics in a wetland soil [2]. A Damköhler number analysis is introduced to interpret the results and evaluate the balance between biochemical reaction and root-driven gas transfer in controlling the fate of CH4 and N2O in vegetated wetland soils. We conclude with a brief discussion of other problems in soil gas dynamics that can be addressed with gas tracer approaches. [1] Blagodatsky and Smith 2012. Soil physics meets soil biology: Towards better mechanistic prediction of greenhouse gas emissions from soil. Soil Biology and Biochemistry 47, 78-92. [2] Reid et al. 2015. Dissolved gas dynamics in wetland soils: Root-mediated gas transfer kinetics determind via push-pull tracer tests. Water Resour. Res. 51, doi:10.1002/2014WR016803.

Integration of Magnetic and Geotechnical methods for Shallow Subsurface Soil Characterization at Sungai Batu, Kedah, Malaysia

NASA Astrophysics Data System (ADS)

Samuel, Y. M.; Saad, R.; Muztaza, N. M.; Saidin, M. M.; Muhammad, S. B.

2018-04-01

Magnetic and geotechnical methods were used for shallow subsurface soil characterization at Sungai Batu, Kedah, (Malaysia). Ground magnetic data were collected along a survey line of length 160 m long at 2 m constant station spacing, while soil drilling using hand auger was conducted at 21 m on the survey line using 0.2 m sampling interval drilled to a depth of 5 m. Result from the processed magnetic profile data shows distribution of magnetic residuals in the range of -4.55 to 1.61 nT, with magnetic low (-4.55 nT to -0.058 nT) and were identified at distances 4 m, 10 to 16 m, 20 to 26 m, 58 m, 82 m, 104 to 106 m, 118 m, and 124 to 140 m. The magnetic lows are attributes of sediments. The result from the soil drilling shows sticky samples with variable sizes, greyish to brownish / reddish in colour, and some of the samples show the presence of shiny and black spots. The characteristics of the samples suggest the soil as a by-product of completely weathered rock; weak with high water content and classified as Grade V soil. The study concludes; integration of geophysical and geotechnical methods aided in characterizing the subsurface soil at Sungai Batu. The result was correlated with previous studies and confirms the importance of integrated approach in minimising ambiguity in interpretation.

Characterization of commercial iron chelates and their behavior in an alkaline and calcareous soil.

PubMed

Cantera, Rodrigo G; Zamarreño, Angel M; García-Mina, José M

2002-12-18

Iron deficiency is a common problem for many plants grown in alkaline and calcareous soils. To correct this problem, iron is supplied to plants as chelates. Several iron chelates are sold under diverse trademarks with different characteristics. This work evaluated 18 commercial products containing the most representative chelated iron sources used in agricultural practice in Spain when the study was done, namely the ferric chelates of EDDHA, EDDHMA, EDDCHA, EDDHSA, EDTA, and DTPA. The chelates were comprehensively characterized and quantitated by several techniques, including several chromatographic methods. Iron and chelate dynamics in soil were also studied in a model alkaline and calcareous soil. Results indicate that, in this model soil, among the different iron compounds studied only FeEDDHA and analogues have the capacity to maintain soluble iron in soil solution over time. These results are in agreement with general experience under field conditions. Furthermore, among the different ortho-ortho isomers of FeEDDHA's, FeEDDHSA and FeEDDCHA showed greater capacity than FeEDDHA and FeEDDHMA to maintain the chelated iron in soil solution over time.

Effects of Long-term Soil and Crop Management on Soil Hydraulic Properties for Claypan Soils

USDA-ARS?s Scientific Manuscript database

Regional and national soil maps and associated databases of soil properties have been developed to help land managers make decisions based on soil characteristics. Hydrologic modelers also utilize soil hydraulic properties provided in these databases, in which soil characterization is based on avera...

Demonstration, testing, & evaluation of in situ heating of soil. Draft final report, Volume II: Appendices A to E

DOE Office of Scientific and Technical Information (OSTI.GOV)

Dev, H.; Enk, J.; Jones, D.

This document is a draft final report for US DOE contract entitled, {open_quotes}Demonstration Testing and Evaluation of In Situ Soil Heating,{close_quotes} Contract No. DE-AC05-93OR22160, IITRI Project No. C06787. This report is presented in two volumes. Volume I contains the technical report This document is Volume II, containing appendices with background information and data. In this project approximately 300 cu. yd. of clayey soil containing a low concentration plume of volatile organic chemicals was heated in situ by the application of electrical energy. It was shown that as a result of heating the effective permeability of soil to air flow wasmore » increased such that in situ soil vapor extraction could be performed. The initial permeability of soil was so low that the soil gas flow rate was immeasurably small even at high vacuum levels. When scaled up, this process can be used for the environmental clean up and restoration of DOE sites contaminated with VOCs and other organic chemicals boiling up to 120{degrees}to 130{degrees}C in the vadose zone. Although it may applied to many types of soil formations, it is particularly attractive for low permeability clayey soil where conventional in situ venting techniques are limited by low air flow.« less

Chemical characterization of iron-mediated soil organic matter stabilization in tropical subsoils

NASA Astrophysics Data System (ADS)

Coward, E.; Plante, A. F.; Thompson, A.

2015-12-01

Tropical forest soils contribute disproportionately to the poorly-characterized and persistent deep soil carbon (C) pool. Highly-weathered and often extending one to two meters deep, these soils also contain an abundance of semicrystalline, Fe- and Al-containing short-range-order (SRO) minerals, metastable derivatives of framework silicate and ferromagnesian parent materials. SRO minerals are capable of soil organic matter (SOM) stabilization through sorption or co-precipitation, a faculty enhanced by their high specific surface area (SSA). As such, SRO-mediated organomineral associations may prove a critical, yet matrix-selective, driver of SOM stabilization capacity in tropical soils, particularly at depth. Surface (0-20 cm) and subsoil (50-80 cm) samples were taken from 20 quantitative soil pits dug in the Luquillo Critical Zone Observatory, located in northeast Puerto Rico. Soils were stratified across granodiorite and volcaniclastic parent materials, spanning primary mineral contents of 5 to 40%. Selective dissolution procedures were used to isolate distinct forms of Fe-C interactions: (1) sodium pyrophosphate to isolate organo-mineral complexes, (2) hydroxylamine and (3) oxalate to isolate SRO phases, and (4) inorganic dithionite to isolate crystalline Fe oxides. Extracts were analysed for dissolved organic C (DOC) and Fe and Al concentrations to estimate SOM associated with each mineral phase. Soils were also subjected to SSA analysis, 57Fe-Mössbauer spectroscopy and X-ray diffraction before and after extraction to determine the contribution of extracted mineral phases to SOM stabilization capacity. Preliminary results indicate a dominance of secondary (hydr)oxides and kaolin minerals in surface soils, strongly driven by parent material. With depth, however, we observe a marked shift towards SRO mineral phases across both parent materials, suggesting that SRO-mediated organomineral associations are significant contributors to observed C storage in tropical

Identifying key soil cyanobacteria easy to isolate and culture for arid soil restoration

NASA Astrophysics Data System (ADS)

Roncero-Ramos, Beatriz; Ángeles Muñoz-Martín, M.; Chamizo, Sonia; Román, Raúl; Rodriguez-Caballero, Emilio; Mateo, Pilar; Cantón, Yolanda

2017-04-01

Drylands represent an important fraction of the Earth land's surface. Low cover of vascular plants characterizes these regions, and the large open areas among plants are often colonized by cyanobacteria, mosses, lichens, algae, bryophytes, bacteria and fungi, known as biocrusts. Because these communities are on or within the soil surface, they contribute to improve physicochemical properties of the uppermost soil layers and have important effects on soil fertility and stability, so they could play an important role on soil restoration. Cyanobacteria appear to be a cross component of biocrusts and they have been demonstrated to enhance water availability, soil fertility (fixing atmospheric C and N), and soil aggregation (thanks to their filamentous morphology and the exopolysaccharides they excrete), and significantly reduce water and wind erosion. Besides, they are able to tolerate high temperatures and UV radiation. All these features convert cyanobacteria in pioneer organisms capable of colonizing degraded soils and may be crucial in facilitating the succession of more developed organisms such as vascular plants. Therefore, the use of native cyanobacteria, already adapted to site environmental conditions, could guarantee a successful restoration approach of degraded soils. However, previous to their application for soil restoration, the most representative species inhabiting these soils should be identified. The objective of this study was to identify (morphologically and genetically) and isolate representative native cyanobacteria species from arid soils in SE Spain, characterized for being easily isolated and cultured with the aim of using them to inoculate degraded arid soil. We selected two study areas in Almería, SE Spain, where biocrust cover most of the open spaces between plants: El Cautivo experimental site located in the Tabernas desert and a limestone quarry located at the southeastern edge of the Gádor massif. The first site is characterized by

Water movement in stony soils: The influence of stoniness on soil water content profiles

NASA Astrophysics Data System (ADS)

Novak, Viliam; Knava, Karol

2010-05-01

WATER MOVEMENT IN STONY SOILS: THE INFLUENCE OF STONINESS ON SOIL WATER CONTENT PROFILES Viliam Novák, Karol Kňava Institute of Hydrology, Slovak Academy of Sciences, Racianska 75, 831 02 Bratislava 3, Slovakia, e-mail: novak@uh.savba.sk Soils containing rock fragments are widespread over the world, on Europe such soil account for 30%, 60% in Mediterranean region. In comparison to fine earth soils (soil particles are less then 2 mm) stony soils contain rock fragments characterized by the low retention capacity and hydraulic conductivity. So, for stony soils -in comparison to the fine-earth soils - is typical lower hydraulic conductivity and retention capacity, which lead to the decrease decrease of infiltration rate and low water retention. So, water movement and its modeling in stony soil would differ from fine earth (usually agricultural) soil. The aim of this contribution is to demonstrate the differences in water movement in homogeneous soil (fine earth) and stony soil. The influence of different stoniness on soil water content and soil water dynamics was studied too. Windthrow at High Tatra mountains in Slovakia (November 2004) cleared nearly 12 000 ha of 80 year conifers and this event initiated complex research of windthrow impact on the ecosystem. The important part of this study was water movement in impacted area. Specific feature of the soil in this area was moraine soil consisting of fine earth, characterized as silty sand, with the relative stone content up to 0.49, increasing with depth. Associated phenomenon to the forest clearing is the decrease of rain interception and higher undercanopy precipitation. Conifers interception capacity can be three times higher than low canopy interception, and can reach up to 40% of annual precipitation in Central Europe. Stones in the soil are decreasing infiltration rate, but paradoxically increased understorey precipitation and followingly the increased cumulative infiltration led to the increase of the soil

U.S.-MEXICO BORDER PROGRAM ARIZONA BORDER STUDY--STANDARD OPERATING PROCEDURE FOR SOIL CHARACTERIZATION (UA-L-11.1)

EPA Science Inventory

The purpose of this SOP is to describe the procedures to be followed in splitting and determining the grain size characteristics, electrical conductivity, and pH of the "Composite Soil" and "Foundation Soil" samples. This procedure applies to the general characterization of sedi...

Soil

USDA-ARS?s Scientific Manuscript database

Soil is a diverse natural material characterized by solid, liquid, and gas phases that impart unique chemical, physical, and biological properties. Soil provides many key functions, including supporting plant growth and providing environmental remediation. Monitoring key soil properties and processe...

Demonstration Results for the Phytoextraction of Lead-Contaminated Soil at the Twin Cities Army Ammunition Plant, Arden Hills, Minnesota

DTIC Science & Technology

2000-07-01

and leachate collection prior to approval of future phytoextraction at sites such as this. Lead Phytoremediation Demonstration 8-1...number) FIELD GROUP SUB-GROUP Phytoremediation of Lead-Contaminated Soil 19. ABSTRACT (Continue on reverse if necessary and identify by block number...editions are obsolete SECURITY CLASSIFICATION OF THIS PAGE Lead Phytoremediation Demonstration

Field demonstration of reduction of lead availability in soil and cabbage (Brassica Chinensis L.) contaminated by mining tailings using phosphorus fertilizers*

PubMed Central

Xie, Zheng-miao; Wang, Bi-ling; Sun, Ye-fang; Li, Jing

2006-01-01

A field demonstration of reduction of lead availability in a soil and cabbage (Brassica Chinensis L.) contaminated by mining tailings, located in Shaoxing, China was carried out to evaluate the effects of applications of phosphorus fertilizers on Pb fractionation and Pb phytoavailability in the soil. It was found that the addition of all three P fertilizers including single super phosphate (SSP), phosphate rock (PR), and calcium magnesium phosphate (CMP) significantly decreased the percentage of water-soluble and exchangeable (WE) soil Pb and then reduced the uptake of Pb, Cd, and Zn by the cabbage compared to the control (CK). The results showed that the level of 300 g P/m2 soil was the most cost-effective application rate of P fertilizers for reducing Pb availability at the first stage of remediation, and that at this P level, the effect of WE fraction of Pb in the soil decreased by three phosphorus fertilizers followed the order: CMP (79%)>SSP (41%)>PR (23%); Effectiveness on the reduction of Pb uptake by cabbage was in the order: CMP (53%)>SSP (41%)>PR (30%). Therefore our field trial demonstrated that it was effective and feasible to reduce Pb availability in soil and cabbage contaminated by mining tailings using P fertilizers in China and PR would be a most cost-effective amendment. PMID:16365925

Developing and using artificial soils to analyze soil microbial processes

NASA Astrophysics Data System (ADS)

Gao, X.; Cheng, H. Y.; Boynton, L.; Masiello, C. A.; Silberg, J. J.

2017-12-01

Microbial diversity and function in soils are governed by soil characteristics such as mineral composition, particles size and aggregations, soil organic matter (SOM), and availability of nutrients and H2O. The spatial and temporal heterogeneity of soils creates a range of niches (hotspots) differing in the availability of O2, H2O, and nutrients, which shapes microbial activities at scales ranging from nanometer to landscape. Synthetic biologists often examine microbial response trigged by their environment conditions in nutrient-rich aqueous media using single strain microbes. While these studies provided useful insight in the role of soil microbes in important soil biogeochemical processes (e.g., C cycling, N cycling, etc.), the results obtained from the over-simplified model systems are often not applicable natural soil systems. On the contrary, soil microbiologists examine microbial processes in natural soils using longer incubation time. However, due to its physical, chemical and biological complexity of natural soils, it is often difficult to examine soil characteristics independently and understand how each characteristic influences soil microbial activities and their corresponding soil functioning. Therefore, it is necessary to bridge the gap and develop a model matrix to exclude unpredictable influences from the environment while still reliably mimicking real environmental conditions. The objective of this study is to design a range of ecologically-relevant artificial soils with varying texture (particle size distribution), structure, mineralogy, SOM content, and nutrient heterogeneity. We thoroughly characterize the artificial soils for pH, active surface area and surface morphology, cation exchange capacity (CEC), and water retention curve. We demonstrate the effectiveness of the artificial soils as useful matrix for microbial processes, such as microbial growth and horizontal gene transfer (HGT), using the gas-reporting biosensors recently developed in

Isolation and characterization of antagonistic fungi against potato scab pathogens from potato field soils.

PubMed

Tagawa, Masahiro; Tamaki, Hideyuki; Manome, Akira; Koyama, Osamu; Kamagata, Yoichi

2010-04-01

Potato scab is a serious plant disease caused by several Streptomyces sp., and effective control methods remain unavailable. Although antagonistic bacteria and phages against potato scab pathogens have been reported, to the best of our knowledge, there is no information about fungi that are antagonistic to the pathogens. The aim of this study was to isolate fungal antagonists, characterize their phylogenetic positions, determine their antagonistic activities against potato scab pathogens, and highlight their potential use as control agents under lower pH conditions. Fifteen fungal stains isolated from potato field soils were found to have antagonistic activity against three well-known potato scab pathogens: Streptomyces scabiei, Streptomyces acidiscabiei, and Streptomyces turgidiscabiei. These 15 fungal strains were phylogenetically classified into at least six orders and nine genera based on 18S rRNA gene sequencing analysis. These fungal isolates were related to members of the genera Penicillium, Eupenicillium, Chaetomium, Fusarium, Cladosporium, Mortierella, Kionochaeta, Pseudogymnoascus, and Lecythophora. The antagonistic activities of most of the fungal isolates were highly strengthened under the lower pH conditions, suggesting the advantage of combining their use with a traditional method such as soil acidification. This is the first report to demonstrate that phylogenetically diverse fungi show antagonistic activity against major potato scab pathogens. These fungal strains could be used as potential agents to control potato scab disease.

Characterization of Soil Samples of Enzyme Activity

ERIC Educational Resources Information Center

Freeland, P. W.

1977-01-01

Described are nine enzyme essays for distinguishing soil samples. Colorimetric methods are used to compare enzyme levels in soils from different sites. Each soil tested had its own spectrum of activity. Attention is drawn to applications of this technique in forensic science and in studies of soil fertility. (Author/AJ)

Bacterial community characterization in the soils of native and restored rainforest fragments.

PubMed

Vasconcellos, Rafael L F; Zucchi, Tiago D; Taketani, Rodrigo G; Andreote, Fernando D; Cardoso, Elke J B N

2014-11-01

The Brazilian Atlantic Forest ("Mata Atlântica") has been largely studied due to its valuable and unique biodiversity. Unfortunately, this priceless ecosystem has been widely deforested and only 10 % of its original area is still untouched. Some projects have been successfully implemented to restore its fauna and flora but there is a lack of information on how the soil bacterial communities respond to this process. Thus, our aim was to evaluate the influence of soil attributes and seasonality on soil bacterial communities of rainforest fragments under restoration processes. Soil samples from a native site and two ongoing restoration fragments with different times of implementation (10 and 20 years) were collected and assayed by using culture-independent approaches. Our findings demonstrate that seasonality barely altered the bacterial distribution whereas soil chemical attributes and plant species were related to bacterial community structure during the restoration process. Moreover, the strict relationship observed for two bacterial groups, Solibacteriaceae and Verrucomicrobia, increasing from the more recently planted (10 years) to the native site, with the 20 year old restoration site in the middle, which may suggest their use as bioindicators of soil quality and recovery of forest fragments being restored.

Environmental Site Characterization for the Wide Area Mine Sensor Demonstration, Aberdeen Proving Ground, October 1988

DTIC Science & Technology

1991-05-01

AD-A237 045 MP I ENVIRONMENTAL SITE CHARACTERIZATION of EFOR THE WIDE AREA MINE SENSOR DEMONSTRATION, ABERDEEN PROVING GROUND , OCTOBER 1988 T- by...Wide Area Mine Sensor Demonstration, Aberdeen Proving Ground , October 1988 6. AUTHOR(S) Bruce M. Sabol, Thomas E. Berry, Ben L. Garnes 7. PERFORMING... Proving Ground (APG), Maryland. This report presents data that characterize terrain and environmental factors expected to affect WAN sensor performance

Characterization of P status in forest soils: stocks, fluxes and models

NASA Astrophysics Data System (ADS)

Achat, D. L.; Morel, C.; Bakker, M.; Augusto, L.; Gallet-Budynek, A.; Gonzalez, M.; Jonard, M.

2010-12-01

Phosphorus (P) is a critical limiting factor of plant growth and production in many ecosystems, which often require to be fertilized. However, there is an increasing concern regarding appropriate local and global management of phosphorus resources, since the existing finite phosphate reserves are rapidly being depleted. This implies to understand what processes (biological, physico-chemical) are governing soil P availability in agroecosystems, and in particular in forests, which will be increasingly managed for their C-sink potential in the future. We characterized the P status in forest soils of the largest managed pine forest in Europe (Landes of Gascogne, southwest of France) using isotopic and extraction methods, as well as modelling approaches. Total P concentration in topsoils were extremely low, ranging from 7 to 195 mg Pkg-1. The concentration of phosphate ions in solution decreased with depth and was related to the Al and Fe oxide content, which controlled the diffusion of P from the soil solid phase to the solution. The gross amount of diffusive P in one week as determined by 32P isotopic dilution in batch experiments was low, ranging from 0.2 to 52 mg P kg-1 in the topsoil layer, and could be predicted by pedotransfer functions built on the Al and Fe oxide and soil organic matter contents. Organic P represented 80% of total P in litter and 60% in the surface mineral soil layer, suggesting a higher contribution of biological processes to soil P cycling. Biological mineralization of organic P was quantified using a long-term incubation study (154 days) of a low-sorbing soil labelled with 33P, associated with a batch experiment with 32P labelled soil: gross mineralization of dead soil organic matter and diffusive phosphate P were low (<1 mg kg-1 ) compared to the remineralization of microbial P (14mg kg-1). A modelling approach combined to these isotopic measurements showed that 80 % of microbial P turned over very quickly (5-9 days), while 20% turned over

Geochemical characterization of elements in Vitis vinifera cv. Negroamaro grape berries grown under different soil managements.

PubMed

Pepi, Salvatore; Coletta, Antonio; Crupi, Pasquale; Leis, Marilena; Russo, Sabrina; Sansone, Luigi; Tassinari, Renzo; Chicca, Milvia; Vaccaro, Carmela

2016-04-01

The present geochemical study concerns the impact of viticultural practices in the chemical composition of the grape cultivar "Negroamaro" in Apulia, a southern Italian region renowned for its quality wine. Three types of soil management (SM), two cover cropping with different mixtures, and a soil tillage were considered. For each SM, the vines were irrigated according to two irrigation levels. Chemical composition of soil and of berries of Vitis vinifera cultivar "Negroamaro" were analyzed by X-ray fluorescence, inductively coupled plasma-mass spectrometry and multivariate statistics (linear discrimination analysis). In detail, we investigated major and trace elements behavior in the soil according to irrigation levels, the related index of bioaccumulation (BA) and the relationship between trace element concentration and soil management in "Negroamaro" grapes. The results indicate that soil management affects the mobility of major and trace elements. A specific assimilation of these elements in grapes from vines grown under different soil management was confirmed by BA. Multivariate statistics allowed to associate the vines to the type of soil management. This geochemical characterization of elements could be useful to develop fingerprints of vines of the cultivar "Negroamaro" according to soil management and geographical origin.

Characterization of bacterial communities and functions of two submerged soils from San Vitale park (Italy)

NASA Astrophysics Data System (ADS)

Mocali, Stefano; Chiellini, Carolina; Lagomarsino, Alessandra; Ferronato, Chiara; Vittori Antisari, Livia; Vianello, Gilmo

2015-04-01

Subaqueous soils has been introduced in the last edition of the Keys to Soil Taxonomy (Soil surveystaff, 2014), to describe soils covered by a water column of up to 2.5 m where different pedogenetic processes can be recognized. However, the role of bacterial community structure and function in such environments and its potential use as pedogenetic indicator is still largely unknown. Two submerged soils (WAS-2 and WAS-4) were collected from San Vitale park (Italy), a site where the evolution of the landscape from subaqueous wetland to interdunal and dunal system, and the interfacing of freshwater with saltwater, made this site particularly suitable for examining the pedogenetic indicators which can characterize and predict the soil hydromorphism in trasitional ecosystems. The two soils were classified and their physicochemical and morphological features were investigated. Selective media were used to isolate both culturable aerobic and anaerobic (microaerophilic) bacteria associated with each horizon. In WAS-2 seven horizons were identified (depths 4-0, 0-6, 6-13, 13-20, 20-36, 36-59/60, and 59/60-83 cm) while in WAS-4, five horizons were identified (depths 0-14, 14-20, 20-40, 40-45, 45-100 cm) for a total of 12 horizons (samples). For each sample, aerobic bacterial plate count was performed on solid LB medium, coupled with microaerophilic bacterial plate count either on SA500 minimal medium and AYE medium (0.5% soft agar each). Molecular identification (16S rRNA gene sequencing) of ~100 strains isolated from each of the three used medium was performed, for a total of ~300 strains for each sample. To complete the characterization of the microbial communities in all horizons, Next Generation Sequencing (NGS) analysis was carried out with 454 platform on each of the 12 samples. Moreover, the N2O and CH4 emissions were determined from each pedon. All the parameters were used to highlight the similarities and the differences between and within the pedons. The results

Evaluation and characterization of anti-estrogenic and anti-androgenic activities in soil samples along the Second Songhua River, China.

PubMed

Li, Jian; Wang, Yafei; Kong, Dongdong; Wang, Jinsheng; Teng, Yanguo; Li, Na

2015-11-01

In the present study, re-combined estrogen receptor (ER) and androgen receptor (AR) gene yeast assays combined with a novel approach based on Monte Carlo simulation were used for evaluation and characterization of soil samples collected from Jilin along the Second Songhua River to assess their antagonist/agonist properties for ER and AR. The results showed that estrogenic activity only occurred in the soil samples collected in the agriculture area, but most soil samples showed anti-estrogenic activities, and the bioassay-derived 4-hydroxytamoxifen equivalents ranged from N.D. to 23.51 μg/g. Hydrophilic substance fractions were determined as potential contributors associated with anti-estrogenic activity in these soil samples. Moreover, none of the soil samples exhibited AR agonistic potency, whereas 54% of the soil samples exhibited AR antagonistic potency. The flutamide equivalents varied between N.D. and 178.05 μg/g. Based on Monte Carlo simulation-related mass balance analysis, the AR antagonistic activities were significantly correlated with the media polar and polar fractions. All of these results support that this novel calculation method can be adopted effectively to quantify and characterize the ER/AR agonists and antagonists of the soil samples, and these data could help provide useful information for future management and remediation efforts.

Characterization of labile organic carbon in coastal wetland soils of the Mississippi River deltaic plain: relationships to carbon functionalities.

PubMed

Dodla, Syam K; Wang, Jim J; Delaune, Ronald D

2012-10-01

Adequate characterization of labile organic carbon (LOC) is essential to the understanding of C cycling in soil. There has been very little evaluation about the nature of LOC characterizations in coastal wetlands, where soils are constantly influenced by different redox fluctuations and salt water intrusions. In this study, we characterized and compared LOC fractions in coastal wetland soils of the Mississippi River deltaic plain using four different methods including 1) aerobically mineralizable C (AMC), 2) cold water extractable C (CWEC), 3) hot water extractable C (HWEC), and 4) salt extractable C (SEC), as well as acid hydrolysable C (AHC) which includes both labile and slowly degradable organic C. Molecular organic C functional groups of these wetland soils were characterized by (13)C solid-state nuclear magnetic resonance (NMR). The LOC and AHC increased with soil organic C (SOC) regardless of wetland soil type. The LOC estimates by four different methods were positively and significantly linearly related to each other (R(2)=0.62-0.84) and with AHC (R(2)=0.47-0.71). The various LOC fractions accounted for ≤4.3% of SOC whereas AHC fraction represented 16-49% of SOC. AMC was influenced positively by O/N-alkyl and carboxyl C but negatively by alkyl C, whereas CWEC and SEC fractions were influenced only positively by carboxyl C but negatively by alkyl C in SOC. On the other hand, HWEC fraction was found to be only influenced positively by carbonyl C, and AHC positively by O/N-alkyl and alkyl C but negatively by aromatic C groups in SOC. Overall these relations suggested different contributions of various molecular organic C moieties to LOC in these wetlands from those often found for upland soils. The presence of more than 50% non-acid hydrolysable C suggested the dominance of relatively stable SOC pool that would be sequestered in these Mississippi River deltaic plain coastal wetland soils. The results have important implications to the understanding of the

Exploiting Soil Moisture, Precipitation, and Streamflow Observations to Evaluate Soil Moisture/Runoff Coupling in Land Surface Models

NASA Astrophysics Data System (ADS)

Crow, W. T.; Chen, F.; Reichle, R. H.; Xia, Y.; Liu, Q.

2018-05-01

Accurate partitioning of precipitation into infiltration and runoff is a fundamental objective of land surface models tasked with characterizing the surface water and energy balance. Temporal variability in this partitioning is due, in part, to changes in prestorm soil moisture, which determine soil infiltration capacity and unsaturated storage. Utilizing the National Aeronautics and Space Administration Soil Moisture Active Passive Level-4 soil moisture product in combination with streamflow and precipitation observations, we demonstrate that land surface models (LSMs) generally underestimate the strength of the positive rank correlation between prestorm soil moisture and event runoff coefficients (i.e., the fraction of rainfall accumulation volume converted into stormflow runoff during a storm event). Underestimation is largest for LSMs employing an infiltration-excess approach for stormflow runoff generation. More accurate coupling strength is found in LSMs that explicitly represent subsurface stormflow or saturation-excess runoff generation processes.

Regional Characterization of Soil Properties via a Combination of Methods from Remote Sensing, Geophysics and Geopedology

NASA Astrophysics Data System (ADS)

Meyer, Uwe; Fries, Elke; Frei, Michaela

2016-04-01

Soil is one of the most precious resources on Earth. Preserving, using and enriching soils are most complex processes that fundamentally need a sound regional data base. Many countries lack this sort of extensive data or the existing data must be urgently updated when land use recently changed in major patterns. The project "RECHARBO" (Regional Characterization of Soil Properties) aims at the combination of methods from remote sensing, geophysics and geopedology in order to develop a new system to map soils on a regional scale in a quick and efficient manner. First tests will be performed on existing soil monitoring districts, using newly available sensing systems as well as established techniques. Especially hyperspectral and infrared data measured from satellites or airborne platforms shall be combined. Moreover, a systematic correlation between hyperspectral imagery and gamma-ray spectroscopy shall be established. These recordings will be compared and correlated to measurements upon ground and on soil samples to get hold of properties such as soil moisture, soil density, specific resistance plus analytic properties like clay content, anorganic background, organic matter etc. The goal is to generate a system that enables users to map soil patterns on a regional scale using airborne or satellite data and to fix their characteristics with only a limited number of soil samples.

Characterization of soil and postlaunch pad debris from Cape Canaveral launch complex and analysis of soil interaction with aqueous HCl

NASA Technical Reports Server (NTRS)

Pellett, G. L.; Spangler, L. W.; Storey, R. W.; Bendura, R. J.

1982-01-01

Soil samples were fractionated and analyzed in order to assess the physical and chemical interactions of entrained soil with solid-rocket exhaust clouds. The sandy soil consisted primarily of quartz (silica) particles, 30 to 500 microns in diameter, and also contained seashell fragments. Differential and cumulative soil-mass size distributions are presented along with mineralogy, elemental compositions, and solution pH histories. About 90 percent of the soil mass consisted of particles 165 microns in diameter. Characteristic reaction times in aqueous HC1 slurries varied from a few minutes to several days, and capacities for reaction under acidic conditions varied from 10 to 40 g HCl/kg soil, depending on particle size. Airborne lifetimes of particles 165 microns are conservatively 30 min, and this major grouping is predicted to represent a small short-term chemical sink for up to 5% of the total HC1. The smaller and more minor fractions, below a 165 micron diameter, may act as giant cloud condensation nuclei over much longer airborne lifetimes. Finally, the demonstrated time dependency of neutralization is a complicating factor; it can influence the ability to deduce in-cloud HCl scavenging with reaction and can affect the accuracy of measured chemical compositions of near-field wet deposition.

Rapid and effective decontamination of chlorophenol-contaminated soil by sorption into commercial polymers: concept demonstration and process modeling.

PubMed

Tomei, M Concetta; Mosca Angelucci, Domenica; Ademollo, Nicoletta; Daugulis, Andrew J

2015-03-01

Solid phase extraction performed with commercial polymer beads to treat soil contaminated by chlorophenols (4-chlorophenol, 2,4-dichlorophenol and pentachlorophenol) as single compounds and in a mixture has been investigated in this study. Soil-water-polymer partition tests were conducted to determine the relative affinities of single compounds in soil-water and polymer-water pairs. Subsequent soil extraction tests were performed with Hytrel 8206, the polymer showing the highest affinity for the tested chlorophenols. Factors that were examined were polymer type, moisture content, and contamination level. Increased moisture content (up to 100%) improved the extraction efficiency for all three compounds. Extraction tests at this upper level of moisture content showed removal efficiencies ≥70% for all the compounds and their ternary mixture, for 24 h of contact time, which is in contrast to the weeks and months, normally required for conventional ex situ remediation processes. A dynamic model characterizing the rate and extent of decontamination was also formulated, calibrated and validated with the experimental data. The proposed model, based on the simplified approach of "lumped parameters" for the mass transfer coefficients, provided very good predictions of the experimental data for the absorptive removal of contaminants from soil at different individual solute levels. Parameters evaluated from calibration by fitting of single compound data, have been successfully applied to predict mixture data, with differences between experimental and predicted data in all cases being ≤3%. Copyright © 2014 Elsevier Ltd. All rights reserved.

Soil moisture observations using L-, C-, and X-band microwave radiometers

NASA Astrophysics Data System (ADS)

Bolten, John Dennis

The purpose of this thesis is to further the current understanding of soil moisture remote sensing under varying conditions using L-, C-, and X-band. Aircraft and satellite instruments are used to investigate the effects of frequency and spatial resolution on soil moisture sensitivity. The specific objectives of the research are to examine multi-scale observed and modeled microwave radiobrightness, evaluate new EOS Aqua Advanced Microwave Scanning Radiometer (AMSR-E) brightness temperature and soil moisture retrievals, and examine future satellite-based technologies for soil moisture sensing. The cycling of Earth's water, energy and carbon is vital to understanding global climate. Over land, these processes are largely dependent on the amount of moisture within the top few centimeters of the soil. However, there are currently no methods available that can accurately characterize Earth's soil moisture layer at the spatial scales or temporal resolutions appropriate for climate modeling. The current work uses ground truth, satellite and aircraft remote sensing data from three large-scale field experiments having different land surface, topographic and climate conditions. A physically-based radiative transfer model is used to simulate the observed aircraft and satellite measurements using spatially and temporally co-located surface parameters. A robust analysis of surface heterogeneity and scaling is possible due to the combination of multiple datasets from a range of microwave frequencies and field conditions. Accurate characterization of spatial and temporal variability of soil moisture during the three field experiments is achieved through sensor calibration and algorithm validation. Comparisons of satellite observations and resampled aircraft observations are made using soil moisture from a Numerical Weather Prediction (NWP) model in order to further demonstrate a soil moisture correlation where point data was unavailable. The influence of vegetation, spatial

Construction of Viable Soil Defined Media Using Quantitative Metabolomics Analysis of Soil Metabolites

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jenkins, Stefan; Swenson, Tami L.; Lau, Rebecca

Exometabolomics enables analysis of metabolite utilization of low molecular weight organic substances by soil bacteria. Thus, environmentally-based defined media are needed to examine ecologically relevant patterns of substrate utilization. Here, we describe an approach for the construction of defined media using untargeted characterization of water soluble soil microbial metabolites from a saprolite soil collected from the Oak Ridge Field Research Center (ORFRC). To broadly characterize metabolites, both liquid chromatography mass spectrometry (LC/MS) and gas chromatography mass spectrometry (GC/MS) were used. With this approach, 96 metabolites were identified, including amino acids, amino acid derivatives, sugars, sugar alcohols, mono- and di-carboxylic acids,more » nucleobases, and nucleosides. From this pool of metabolites, 25 were quantified. Molecular weight cut-off filtration determined the fraction of carbon accounted for by the quantified metabolites and revealed that these soil metabolites have an uneven quantitative distribution (e.g., trehalose accounted for 9.9% of the < 1 kDa fraction). This quantitative information was used to formulate two soil defined media (SDM), one containing 23 metabolites (SDM1) and one containing 46 (SDM2). To evaluate the viability of the SDM, we examined the growth of 30 phylogenetically diverse soil bacterial isolates from the ORFRC field site. The simpler SDM1 supported the growth of 13 isolates while the more complex SDM2 supported 15 isolates. To investigate SDM1 substrate preferences, one isolate, Pseudomonas corrugata strain FW300-N2E2 was selected for a time-series exometabolomics analysis. Interestingly, it was found that this organism preferred lower-abundance substrates such as guanine, glycine, proline and arginine and glucose and did not utilize the more abundant substrates maltose, mannitol, trehalose and uridine. These results demonstrate the viability and utility of using exometabolomics to construct a

Construction of Viable Soil Defined Media Using Quantitative Metabolomics Analysis of Soil Metabolites

PubMed Central

Jenkins, Stefan; Swenson, Tami L.; Lau, Rebecca; Rocha, Andrea M.; Aaring, Alex; Hazen, Terry C.; Chakraborty, Romy; Northen, Trent R.

2017-01-01

Exometabolomics enables analysis of metabolite utilization of low molecular weight organic substances by soil bacteria. Environmentally-based defined media are needed to examine ecologically relevant patterns of substrate utilization. Here, we describe an approach for the construction of defined media using untargeted characterization of water soluble soil microbial metabolites from a saprolite soil collected from the Oak Ridge Field Research Center (ORFRC). To broadly characterize metabolites, both liquid chromatography mass spectrometry (LC/MS) and gas chromatography mass spectrometry (GC/MS) were used. With this approach, 96 metabolites were identified, including amino acids, amino acid derivatives, sugars, sugar alcohols, mono- and di-carboxylic acids, nucleobases, and nucleosides. From this pool of metabolites, 25 were quantified. Molecular weight cut-off filtration determined the fraction of carbon accounted for by the quantified metabolites and revealed that these soil metabolites have an uneven quantitative distribution (e.g., trehalose accounted for 9.9% of the <1 kDa fraction). This quantitative information was used to formulate two soil defined media (SDM), one containing 23 metabolites (SDM1) and one containing 46 (SDM2). To evaluate the viability of the SDM, we examined the growth of 30 phylogenetically diverse soil bacterial isolates from the ORFRC field site. The simpler SDM1 supported the growth of 13 isolates while the more complex SDM2 supported 15 isolates. To investigate SDM1 substrate preferences, one isolate, Pseudomonas corrugata strain FW300-N2E2 was selected for a time-series exometabolomics analysis. Interestingly, it was found that this organism preferred lower-abundance substrates such as guanine, glycine, proline and arginine and glucose and did not utilize the more abundant substrates maltose, mannitol, trehalose and uridine. These results demonstrate the viability and utility of using exometabolomics to construct a tractable

Construction of Viable Soil Defined Media Using Quantitative Metabolomics Analysis of Soil Metabolites

DOE PAGES

Jenkins, Stefan; Swenson, Tami L.; Lau, Rebecca; ...

2017-12-22

Exometabolomics enables analysis of metabolite utilization of low molecular weight organic substances by soil bacteria. Thus, environmentally-based defined media are needed to examine ecologically relevant patterns of substrate utilization. Here, we describe an approach for the construction of defined media using untargeted characterization of water soluble soil microbial metabolites from a saprolite soil collected from the Oak Ridge Field Research Center (ORFRC). To broadly characterize metabolites, both liquid chromatography mass spectrometry (LC/MS) and gas chromatography mass spectrometry (GC/MS) were used. With this approach, 96 metabolites were identified, including amino acids, amino acid derivatives, sugars, sugar alcohols, mono- and di-carboxylic acids,more » nucleobases, and nucleosides. From this pool of metabolites, 25 were quantified. Molecular weight cut-off filtration determined the fraction of carbon accounted for by the quantified metabolites and revealed that these soil metabolites have an uneven quantitative distribution (e.g., trehalose accounted for 9.9% of the < 1 kDa fraction). This quantitative information was used to formulate two soil defined media (SDM), one containing 23 metabolites (SDM1) and one containing 46 (SDM2). To evaluate the viability of the SDM, we examined the growth of 30 phylogenetically diverse soil bacterial isolates from the ORFRC field site. The simpler SDM1 supported the growth of 13 isolates while the more complex SDM2 supported 15 isolates. To investigate SDM1 substrate preferences, one isolate, Pseudomonas corrugata strain FW300-N2E2 was selected for a time-series exometabolomics analysis. Interestingly, it was found that this organism preferred lower-abundance substrates such as guanine, glycine, proline and arginine and glucose and did not utilize the more abundant substrates maltose, mannitol, trehalose and uridine. These results demonstrate the viability and utility of using exometabolomics to construct a

Characterization of ozone decomposition in a soil slurry: kinetics and mechanism.

PubMed

Lim, Hyung-Nam; Choi, Hechul; Hwang, Tae-Moon; Kang, Joon-Wun

2002-01-01

A series of soil slurry experiments were performed in a carefully conceived reactor set-up to investigate the characteristics of the catalytic decomposition of ozone on a sand and iron surface. Real time on-line monitoring of ozone in the reaction module was possible using flow injection analysis coupled with a computer-controlled UV detector and data acquisition system. The effects of the soil media and size, ozone dosage, pH and p-CBA as a probe compound were examined at the given experimental conditions. Two apparent phases existed, and ozone instantaneously decomposed within one second in the first phase. These were defined as the instantaneous ozone demand (ID) phase, and the relatively slow decay stage. The interactions of ozone with the soil organic matter (SOM) and metal oxides were attributed mostly to the instantaneous decomposition of ozone. From the probe (p-CBA) experiments, 60-68% of total p-CBA removal occurred during the ID phase. The generation of hydroxyl radicals (OH.) was demonstrated and was closely related with metal oxides as well as SOM. Metal oxides in soil surface were considered to have relatively faster reaction rate with ozone and provide more favorable reactive sites to generate higher amount of OH. than SOM. Even at one-tenth concentration of the sands, a goethite-induced catalytic reaction outfitted the removal rate ofp-CBA among all the soils tested. More than 40% of total p-CBA removal occurred on the soil surface. It was inferred that the radical reaction with the probe compound seemed to take place not only on the soil surface but also in the solid-liquid interface. Ozone decomposition and the reaction between OH. and p-CBA appeared to be independent of any change in pH.

Towards the Wetness Characterization of Soil Subsurface Using Fibre Optic Distributed Acoustic Sensing

NASA Astrophysics Data System (ADS)

Ciocca, F.; Bodet, L.; Simon, N.; Karaulanov, R.; Clarke, A.; Abesser, C.; Krause, S.; Chalari, A.; Mondanos, M.

2017-12-01

Active seismic methods combined with detectors deployed at the soil surface, such as vertical collinear geophones, have revealed great potential for hydrogeophysical characterization of the soil vadose zone. In particular, recent findings have highlighted a clear dependence of both P-waves arrival times and surface-wave dispersion on the local degree of soil saturation, visible at laboratory as well as at field scale. In this study, we investigate the sensitivity of a fibre optic Distributed Acoustic Sensor (DAS) to different soil saturation. In vertical seismic applications, DAS have proven to offer equal and often better performance compared to the geophones, with the advantage that a fibre optic cable, whose length can reach 40 km, replaces the array of geophones as sensing element. We present the response to active seismic tests of 20 m of fibre optic cable buried in a poorly permeable bare soil. Tests were conducted in different moments of the year, with saturation monitored by means of independent dielectric probes. Body-wave travel times as well as surface-wave dispersion are compared. Finally, we discuss the possibility to determine a site-specific relation between the Poisson ratio and the soil saturation. This research has been performed in the framework of the British National Environmental Research Council (NERC) funded Distributed intelligent Heat Pulse System (DiHPS) project and of the Marie Curie H2020 Research and Innovation Staff Exchange (RISE) consortium Hi-Freq.

Relationships between nuclear magnetic resonance parameters used to characterize weathering spilled oil and soil toxicity in central Patagonia.

PubMed

Ríos, Stella Maris; Barquin, Mercedes; Katusich, Ofelia; Nudelman, Norma

2014-01-01

Oil spill in the Central Patagonian zone was studied to evaluate if any relationship exists between the parameters used to characterize weathering spilled oil and soil toxicity for two plant species and to evaluate if the phytotoxicity to local species would be a good index for the soil contamination. Nuclear magnetic resonance (NMR) structural indexes and column chromatography compositional indexes were determined to characterize the oil spill in the soil samples. Bioassays were also carried out using Lactuca sativa L (reference) and Atriplex lampa (native species) as test organisms. Measurements of the total petroleum hydrocarbon (TPH) and the electrical conductivity (EC) of the soil were carried out to evaluate the effect on the bioassays. The principal components analysis of the parameters determined by NMR, compositional indexes, EC, TPH, and toxicology data shows that the first three principal components accounted for the 78% of the total variance (40%, 25%, and 13% for the first, second, and third PC, respectively). A good agreement was found between information obtained by compositional indexes and NMR structural indexes. Soil toxicity increases with the increase of EC and TPH. Other factors, such as, the presence of branched and aromatic hydrocarbons is also significant. The statistical evaluation showed that the Euclidean distances (3D) between the background and each one of the samples might be a better indicator of the soil contamination, compared with chemical criterion of TPH.

Adaptive Sampling approach to environmental site characterization at Joliet Army Ammunition Plant: Phase 2 demonstration

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bujewski, G.E.; Johnson, R.L.

1996-04-01

Adaptive sampling programs provide real opportunities to save considerable time and money when characterizing hazardous waste sites. This Strategic Environmental Research and Development Program (SERDP) project demonstrated two decision-support technologies, SitePlanner{trademark} and Plume{trademark}, that can facilitate the design and deployment of an adaptive sampling program. A demonstration took place at Joliet Army Ammunition Plant (JAAP), and was unique in that it was tightly coupled with ongoing Army characterization work at the facility, with close scrutiny by both state and federal regulators. The demonstration was conducted in partnership with the Army Environmental Center`s (AEC) Installation Restoration Program and AEC`s Technology Developmentmore » Program. AEC supported researchers from Tufts University who demonstrated innovative field analytical techniques for the analysis of TNT and DNT. SitePlanner{trademark} is an object-oriented database specifically designed for site characterization that provides an effective way to compile, integrate, manage and display site characterization data as it is being generated. Plume{trademark} uses a combination of Bayesian analysis and geostatistics to provide technical staff with the ability to quantitatively merge soft and hard information for an estimate of the extent of contamination. Plume{trademark} provides an estimate of contamination extent, measures the uncertainty associated with the estimate, determines the value of additional sampling, and locates additional samples so that their value is maximized.« less

The impact of fog on soil moisture dynamics in the Namib Desert

NASA Astrophysics Data System (ADS)

Li, Bonan; Wang, Lixin; Kaseke, Kudzai F.; Vogt, Roland; Li, Lin; Seely, Mary K.

2018-03-01

Soil moisture is a crucial component supporting vegetation dynamics in drylands. Despite increasing attention on fog in dryland ecosystems, the statistical characterization of fog distribution and how fog affects soil moisture dynamics have not been seen in literature. To this end, daily fog records over two years (Dec 1, 2014-Nov 1, 2016) from three sites within the Namib Desert were used to characterize fog distribution. Two sites were located within the Gobabeb Research and Training Center vicinity, the gravel plains and the sand dunes. The third site was located at the gravel plains, Kleinberg. A subset of the fog data during rainless period was used to investigate the effect of fog on soil moisture. A stochastic modeling framework was used to simulate the effect of fog on soil moisture dynamics. Our results showed that fog distribution can be characterized by a Poisson process with two parameters (arrival rate λ and average depth α (mm)). Fog and soil moisture observations from eighty (Aug 19, 2015-Nov 6, 2015) rainless days indicated a moderate positive relationship between soil moisture and fog in the Gobabeb gravel plains, a weaker relationship in the Gobabeb sand dunes while no relationship was observed at the Kleinberg site. The modeling results suggested that mean and major peaks of soil moisture dynamics can be captured by the fog modeling. Our field observations demonstrated the effects of fog on soil moisture dynamics during rainless periods at some locations, which has important implications on soil biogeochemical processes. The statistical characterization and modeling of fog distribution are of great value to predict fog distribution and investigate the effects of potential changes in fog distribution on soil moisture dynamics.

DEMONSTRATION BULLETIN: IN-SITU STEAM/HOT AIR SOIL STRIPPING TOXIC TREATMENT (USA) INC.

EPA Science Inventory

This technology uses steam and hot air to strip volatile organics from contaminated soil. The treatment equipment is mobile and treats the soil in-situ without need for soil excavation or transportation. The organic contaminants volatilized from the soil are condensed and col...

Linking Carbon Flux Dynamics and Soil Structure in Dryland Soils

NASA Astrophysics Data System (ADS)

DeCarlo, K. F.; Caylor, K. K.

2016-12-01

Biological sources in the form of microbes and plants play a fundamental role in determining the magnitude of carbon flux. However, the geophysical structure of the soil (which the carbon must pass through before entering the atmosphere) often serves as a constraining entity, which has the potential to serve as instigators or mitigators of those carbon and hydrologic flux processes. We characterized soil carbon dynamics in three dryland soil systems: bioturbated soils, biocompacted soils, and undisturbed soils. Carbon fluxes were characterized using a closed-system respiration chamber, with CO2 concentration differences measured using an infrared gas analyzer (IRGA). Structure of the soil systems, with a focus on the macro-crack structure, were characterized using a combined resin-casting/X-ray imaging technique. Results show fundamental differences in carbon dynamics between the different soil systems/structures: control soils have gaussian distributions of carbon flux that decrease with progressive drying of the soil, while biocompacted soils exhibit exponentially distributed fluxes that do not regularly decrease with increased drying of the soil. Bioturbated soils also exhibit an exponential distribution of carbon flux, though at a much higher magnitude. These differences are evaluated in the context of the underlying soil structure: while the control soils exhibit a shallow and narrow crack structure, the biocompacted soils exhibit a "systematic" crack network with moderate cracking intensity and large depth. The deep crack networks of the biocompacted soils may serve to physically enhance an otherwise weak source of carbon via advection and/or convection, inducing fluxes that are equal or greater than an otherwise carbon-rich soil. The bioturbated soils exhibit a "surficial" crack network that is shallow but extensive, but additionally have deep holes known to convectively vent carbon, which may explain their periodically large carbon fluxes. Our results

An Inexpensive and Simple Method to Demonstrate Soil Water and Nutrient Flow

ERIC Educational Resources Information Center

Nichols, K. A.; Samson-Liebig, S.

2011-01-01

Soil quality, soil health, and soil sustainability are concepts that are being widely used but are difficult to define and illustrate, especially to a non-technical audience. The objectives of this manuscript were to develop simple and inexpensive methodologies to both qualitatively and quantitatively estimate water infiltration rates (IR),…

Use of laboratory geophysical and geotechnical investigation methods to characterize gypsum rich soils

NASA Astrophysics Data System (ADS)

Bhamidipati, Raghava A.

Gypsum rich soils are found in many parts of the world, particularly in arid and semi-arid regions. Most gypsum occurs in the form of evaporites, which are minerals that precipitate out of water due to a high rate of evaporation and a high mineral concentration. Gypsum rich soils make good foundation material under dry conditions but pose major engineering hazards when exposed to water. Gypsum acts as a weak cementing material and has a moderate solubility of about 2.5 g/liter. The dissolution of gypsum causes the soils to undergo unpredictable collapse settlement leading to severe structural damages. The damages incur heavy financial losses every year. The objective of this research was to use geophysical methods such as free-free resonant column testing and electrical resistivity testing to characterize gypsum rich soils based on the shear wave velocity and electrical resistivity values. The geophysical testing methods could provide quick, non-intrusive and cost-effective methodologies to screen sites known to contain gypsum deposits. Reconstituted specimens of ground gypsum and quartz sand were prepared in the laboratory with varying amounts of gypsum and tested. Additionally geotechnical tests such as direct shear strength tests and consolidation tests were conducted to estimate the shear strength parameters (drained friction angle and cohesion) and the collapse potential of the soils. The effect of gypsum content on the geophysical and geotechnical parameters of soil was of particular interest. It was found that gypsum content had an influence on the shear wave velocity but had minimal effect on electrical resistivity. The collapsibility and friction angle of the soil increased with increase in gypsum. The information derived from the geophysical and geotechnical tests was used to develop statistical design equations and correlations to estimate gypsum content and soil collapse potential.

Incorporation of satellite remote sensing pan-sharpened imagery into digital soil prediction and mapping models to characterize soil property variability in small agricultural fields

NASA Astrophysics Data System (ADS)

Xu, Yiming; Smith, Scot E.; Grunwald, Sabine; Abd-Elrahman, Amr; Wani, Suhas P.

2017-01-01

Soil prediction models based on spectral indices from some multispectral images are too coarse to characterize spatial pattern of soil properties in small and heterogeneous agricultural lands. Image pan-sharpening has seldom been utilized in Digital Soil Mapping research before. This research aimed to analyze the effects of pan-sharpened (PAN) remote sensing spectral indices on soil prediction models in smallholder farm settings. This research fused the panchromatic band and multispectral (MS) bands of WorldView-2, GeoEye-1, and Landsat 8 images in a village in Southern India by Brovey, Gram-Schmidt and Intensity-Hue-Saturation methods. Random Forest was utilized to develop soil total nitrogen (TN) and soil exchangeable potassium (Kex) prediction models by incorporating multiple spectral indices from the PAN and MS images. Overall, our results showed that PAN remote sensing spectral indices have similar spectral characteristics with soil TN and Kex as MS remote sensing spectral indices. There is no soil prediction model incorporating the specific type of pan-sharpened spectral indices always had the strongest prediction capability of soil TN and Kex. The incorporation of pan-sharpened remote sensing spectral data not only increased the spatial resolution of the soil prediction maps, but also enhanced the prediction accuracy of soil prediction models. Small farms with limited footprint, fragmented ownership and diverse crop cycle should benefit greatly from the pan-sharpened high spatial resolution imagery for soil property mapping. Our results show that multiple high and medium resolution images can be used to map soil properties suggesting the possibility of an improvement in the maps' update frequency. Additionally, the results should benefit the large agricultural community through the reduction of routine soil sampling cost and improved prediction accuracy.

Characterizing Martian Soils: Correlating Orbital Observations with Chemistry and Mineralogy from Landed Missions

NASA Astrophysics Data System (ADS)

Bishop, J. L.

2010-12-01

Great advances have been achieved recently in our understanding of the surface of Mars at global scales from orbital missions and at local scales from landed missions. This presentation seeks to provide links between the chemistry and mineralogy observed by landed missions with remote detections of minerals from orbit. Spectral data from CRISM, OMEGA and TES characterize a mostly basaltic planet with some outcrops of hematite, clays, sulfates and carbonates at the surface. Recent alteration of these rocks to form soils has likely been dominated by physical processes; however, martian soils probably also contain relicts of early alteration involving aqueous processes. Clays, hydroxides, sulfates, carbonates and perchlorates are examples of surface components that may have formed early in the planet’s history in the presence of liquid water. Some of these minerals have not been detected in the soil, but all have likely contributed to the current soil composition. The grain size, shape, chemistry, mineralogy, and magnetic properties of Martian soils are similar to altered volcanic ash found at many analog sites on Earth. Reflectance and emission spectra of some of these analog soils are consistent with the basic soil spectral properties observed from orbit. The cemented soil units observed by rovers may have formed through interaction of the soil grains with salts, clays, and hydroxides. Lab experiments have shown that cementing of analog grains darkens the VN reflectance, which could explain the low reflectance of Martian soils compared to analog sites. Reflectance spectra of an analog soil mixture containing altered ash and sulfate are shown in Figure 1. A pellet was made by adding water and allowing the sample to dry in air. Finally, the pellet was crushed and ground again to <125 µm. Both the dried pellet spectrum and the crushed pellet spectrum are darker than the original spectrum of the same composition. Erosion and weathering are likely the dominant

Algological and Mycological Characterization of Soils under Pine and Birch Forests in the Pasvik Reserve

NASA Astrophysics Data System (ADS)

Korneikova, M. V.; Redkina, V. V.; Shalygina, R. R.

2018-02-01

The structure of algological and mycological complexes in Al-Fe-humus podzols (Albic Podzols) under pine and birch forests of the Pasvik Reserve is characterized. The number of micromycetes is higher in more acid soils of the pine forest, while the species diversity is greater under the birch forest. The genus Penicillium includes the largest number of species. The greatest abundance and occurrence frequency are typical for Penicillium spinulosum, P. glabrum, and Trichoderma viride in pine forest and for Umbelopsis isabellina, Mucor sp., Mortierella alpina, P. glabrum, Aspergillus ustus, Trichoderma viride, and T. koningii in birch forest. Cyanobacteria-algal cenoses of the investigated soils are predominated by green algae. Soils under birch forest are distinguished by a greater diversity of algal groups due to the presence of diatoms and xanthophytes. Species of frequent occurrence are represented by Pseudococcomyxa simplex and Parietochloris alveolaris in soils of the pine forest and by Tetracystis cf. aplanospora, Halochlorella rubescens, Pseudococcomyxa simplex, Fottea stichococcoides, Klebsormidium flaccidum, Hantzschia amphioxys, Microcoleus vaginatus, and Aphanocapsa sp. in soils under birch forest

Characterizing the phosphorus forms extracted from soil by the Mehlich III soil test

USDA-ARS?s Scientific Manuscript database

Phosphorus (P) can limit crop production in many soils, but P loss from soils may impair water quality; soil testing can guide fertilizer recommendations to optimize crop growth while minimizing P loss. The Mehlich III (M3) soil test is widely used in North America, followed by colorimetric analysis...

Subsurface Characterization using Geophysical Seismic Refraction Survey for Slope Stabilization Design with Soil Nailing

NASA Astrophysics Data System (ADS)

Ashraf Mohamad Ismail, Mohd; Ng, Soon Min; Hazreek Zainal Abidin, Mohd; Madun, Aziman

2018-04-01

The application of geophysical seismic refraction for slope stabilization design using soil nailing method was demonstrated in this study. The potential weak layer of the study area is first identify prior to determining the appropriate length and location of the soil nail. A total of 7 seismic refraction survey lines were conducted at the study area with standard procedures. The refraction data were then analyzed by using the Pickwin and Plotrefa computer software package to obtain the seismic velocity profiles distribution. These results were correlated with the complementary borehole data to interpret the subsurface profile of the study area. It has been identified that layer 1 to 3 is the potential weak zone susceptible to slope failure. Hence, soil nails should be installed to transfer the tensile load from the less stable layer 3 to the more stable layer 4. The soil-nail interaction will provide a reinforcing action to the soil mass thereby increasing the stability of the slope.

A soil-landscape framework for understanding spatial and temporal variability in biogeochemical processes in catchments

NASA Astrophysics Data System (ADS)

McGuire, K. J.; Bailey, S. W.; Ross, D. S.

2017-12-01

Heterogeneity in biophysical properties within catchments challenges how we quantify and characterize biogeochemical processes and interpret catchment outputs. Interactions between the spatiotemporal variability of hydrological states and fluxes and soil development can spatially structure catchments, leading to a framework for understanding patterns in biogeochemical processes. In an upland, glaciated landscape at the Hubbard Brook Experimental Forest (HBEF) in New Hampshire, USA, we are embracing the structure and organization of soils to understand the spatial relations between runoff production zones, distinct soil-biogeochemical environments, and solute retention and release. This presentation will use observations from the HBEF to demonstrate that a soil-landscape framework is essential in understanding the spatial and temporal variability of biogeochemical processes in this catchment. Specific examples will include how laterally developed soils reveal the location of active runoff production zones and lead to gradients in primary mineral dissolution and the distribution of weathering products along hillslopes. Soil development patterns also highlight potential carbon and nitrogen cycling hotspots, differentiate acidic conditions, and affect the regulation of surface water quality. Overall, this work demonstrates the importance of understanding the landscape-level structural organization of soils in characterizing the variation and extent of biogeochemical processes that occur in catchments.

Electrochemical characterization of corrosion in materials of grounding systems, simulating conditions of synthetic soils with characteristics of local soils

NASA Astrophysics Data System (ADS)

Salas, Y.; Guerrero, L.; Vera-Monroy, S. P.; Blanco, J.; Jimenez, C.

2017-12-01

The integrity of structures buried in earthing becomes relevant when analysing maintenance and replacement costs of these systems, as the deterioration is mainly due to two factors, namely: the failures caused in the electrical systems, which are due to the system. Failure in earthing due to corrosion at the interface cause an alteration in the structure of the component material and generates an undesirable resistivity that cause malfunction in this type of protection systems. Two local soils were chosen that were categorized as sandy loam and clay loam type, whose chemical characteristics were simulated by means of an electrolyte corresponding to the amount of ions present determined by a soil characterization based on the CICE (effective cation exchange coefficient), which allows us to deduce the percentage of chloride and sulphate ions present for the different levels established in the experimental matrix. The interaction of these soils with grounding electrodes is a complex problem involving many factors to consider. In this study, the rates and corrosion currents of the different soils on two types of electrodes, one copper and the other AISI 304 stainless steel, were approximated by electrochemical techniques such as potentiodynamic curves and electrochemical impedance spectra. Considerably higher speeds were determined for copper-type electrodes when compared to those based on steel. However, from the Nyquist diagrams, it was noted that copper electrodes have better electrical performance than steel ones. The soil with the highest ionic activity turned out to be the sandy loam. The clay loam soil presents a tendency to water retention and this may be the reason for the different behaviour with respect to ionic mobility. The diffusion control in the steel seems to alter the ionic mobility because its corrosion rates proved to be very similar regardless of the type of soil chemistry. In general, corrosion rates fell since tenths of a millimetre every year to

Strategies to improve reference databases for soil microbiomes

DOE PAGES

Choi, Jinlyung; Yang, Fan; Stepanauskas, Ramunas; ...

2016-12-09

A database of curated genomes is needed to better assess soil microbial communities and their processes associated with differing land management and environmental impacts. Interpreting soil metagenomic datasets with existing sequence databases is challenging because these datasets are biased towards medical and biotechnology research and can result in misleading annotations. We have curated a database of 928 genomes of soil-associated organisms (888 bacteria, 34 archaea, and 6 fungi). Using this database as a representation of the current state of knowledge of soil microbes that are well-characterized, we evaluated its composition and compared it to broader microbial databases, specifically NCBI’s RefSeq,more » as well as 3,035 publicly available soil amplicon datasets. These comparisons identified phyla and functions that are enriched in soils as well as those that may be underrepresented in RefSoil. For example, RefSoil was observed to have increased representation of Firmicutes despite its low abundance in soil environments and also lacked representation of Acidobacteria and Verrucomicrobia, which are abundant in soils. Our comparison of RefSoil to soil amplicon datasets allowed us to identify targets that if cultured or sequenced would significantly increase the biodiversity represented within RefSoil. To demonstrate the opportunities to access these underrepresented targets, we employed single cell genomics in a pilot experiment to recover 14 genomes from the "most wanted" list, which improved RefSoil's representation of EMP sequences by 7% by abundance. This effort demonstrates the value of RefSoil in the guidance of future research efforts and the capability of single cell genomics as a practical means to fill the existing genomic data gaps.« less

Strategies to improve reference databases for soil microbiomes

DOE Office of Scientific and Technical Information (OSTI.GOV)

Choi, Jinlyung; Yang, Fan; Stepanauskas, Ramunas

A database of curated genomes is needed to better assess soil microbial communities and their processes associated with differing land management and environmental impacts. Interpreting soil metagenomic datasets with existing sequence databases is challenging because these datasets are biased towards medical and biotechnology research and can result in misleading annotations. We have curated a database of 928 genomes of soil-associated organisms (888 bacteria, 34 archaea, and 6 fungi). Using this database as a representation of the current state of knowledge of soil microbes that are well-characterized, we evaluated its composition and compared it to broader microbial databases, specifically NCBI’s RefSeq,more » as well as 3,035 publicly available soil amplicon datasets. These comparisons identified phyla and functions that are enriched in soils as well as those that may be underrepresented in RefSoil. For example, RefSoil was observed to have increased representation of Firmicutes despite its low abundance in soil environments and also lacked representation of Acidobacteria and Verrucomicrobia, which are abundant in soils. Our comparison of RefSoil to soil amplicon datasets allowed us to identify targets that if cultured or sequenced would significantly increase the biodiversity represented within RefSoil. To demonstrate the opportunities to access these underrepresented targets, we employed single cell genomics in a pilot experiment to recover 14 genomes from the "most wanted" list, which improved RefSoil's representation of EMP sequences by 7% by abundance. This effort demonstrates the value of RefSoil in the guidance of future research efforts and the capability of single cell genomics as a practical means to fill the existing genomic data gaps.« less

Does Litter Impart A Detectable Chemical Signal on Soil DOC? DOC Fluorescence Signatures in Soils Undergoing Long-Term Litter Manipulations

NASA Astrophysics Data System (ADS)

Lajtha, K.; Strid, A.; Lee, B. S.

2015-12-01

Soil dissolved organic carbon (DOC) is a small but crucial part of the forest carbon cycle. Characterizing the relationship between organic matter inputs to soil and DOC chemistry is crucial to understanding the ultimate fate of root carbon, fallen wood and needles. Chemical differences in the DOC pool may help to explain whether fractions are sorbed to mineral surfaces and contribute to accumulation of soil organic carbon, respired as CO2, or exported. Soil solution DOC was sampled from the detrital input and removal treatment (DIRT) plots located in the H.J. Andrews Experimental Forest, OR to determine whether detrital inputs impart a detectable signal on DOC in mineral soil. Multiple types of fresh litter extracts, along with lysimeter and soil extracts from DIRT treatment plots were characterized using UV-Vis and fluorescence spectroscopy coupled with the Cory and McKnight (2005) parallel factor analysis (PARAFAC) model. Principal component analysis of 13 unique fluorophores distinguished using PARAFAC show that litter and soil extracts (needles, wood of decomposition Class 1, Class 3 and Class 5, O-horizon, and A-horizon) each have distinct fluorescence signatures. However, while litter-leached DOC chemistry varies by litter type, neither lysimeter-collected DOC or soil extracts show statistically significant differences in fluorescence signatures among treatments, even after 17 years of litter manipulations. The lack of observed differences among DIRT treatments suggests a "Soil Blender" hypothesis whereby both abiotic and biotic mechanisms effectively homogenize organic carbon constituents within the dissolved pool. The results of this work emphasize the ability of sorption and biodegradation to homogenize soil DOC and demonstrate that fluorescence can be an effective fingerprinting technique for soil DOC composition.

Soil structure characterized using computed tomographic images

Treesearch

Zhanqi Cheng; Stephen H. Anderson; Clark J. Gantzer; J. W. Van Sambeek

2003-01-01

Fractal analysis of soil structure is a relatively new method for quantifying the effects of management systems on soil properties and quality. The objective of this work was to explore several methods of studying images to describe and quantify structure of soils under forest management. This research uses computed tomography and a topological method called Multiple...

Isolation and characterization of aerobic anoxygenic phototrophs from exposed soils from the Sør Rondane Mountains, East Antarctica.

PubMed

Tahon, Guillaume; Willems, Anne

2017-09-01

This study investigated the culturable aerobic phototrophic bacteria present in soil samples collected in the proximity of the Belgian Princess Elisabeth Station in the Sør Rondane Mountains, East Antarctica. Until recently, only oxygenic phototrophic bacteria (Cyanobacteria) were well known from Antarctic soils. However, more recent non-cultivation-based studies have demonstrated the presence of anoxygenic phototrophs and, particularly, aerobic anoxygenic phototrophic bacteria in these areas. Approximately 1000 isolates obtained after prolonged incubation under different growth conditions were studied and characterized by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. Representative strains were identified by sequence analysis of 16S rRNA genes. More than half of the isolates grouped among known aerobic anoxygenic phototrophic taxa, particularly with Sphingomonadaceae, Methylobacterium and Brevundimonas. In addition, a total of 330 isolates were tested for the presence of key phototrophy genes. While rhodopsin genes were not detected, multiple isolates possessed key genes of the bacteriochlorophyll synthesis pathway. The majority of these potential aerobic anoxygenic phototrophic strains grouped with Alphaproteobacteria (Sphingomonas, Methylobacterium, Brevundimonas and Polymorphobacter). Copyright © 2017 The Authors. Published by Elsevier GmbH.. All rights reserved.

Sorption Equilibria of Vapor Phase Organic Pollutants on Unsaturated Soils and Soil Minerals

DTIC Science & Technology

1990-04-01

Sorbent Characterization .. ........ .......... 6 a. Description of Inorganic Solids and Soils. .... ........ 6 b. Moisture Content...compounds (TCE and toluene) is compared for a cored depth profile obtained from an unsaturated soil and for simulated profiles using inorganic solids. The...Sorbent Characterization a. Description of Inorganic Solids and Soils Inorganic solids were used for initial sorption studies to develop experimental

An Enzymatic Treatment of Soil-Bound Prions Effectively Inhibits Replication ▿

PubMed Central

Saunders, Samuel E.; Bartz, Jason C.; Vercauteren, Kurt C.; Bartelt-Hunt, Shannon L.

2011-01-01

Chronic wasting disease (CWD) and scrapie can be transmitted through indirect environmental routes, possibly via soil, and a practical decontamination strategy for prion-contaminated soil is currently unavailable. In the laboratory, an enzymatic treatment under environmentally relevant conditions (22°C, pH 7.4) can degrade soil-bound PrPSc below the limits of Western blot detection. We developed and used a quantitative serial protein misfolding cyclic amplification (PMCA) protocol to characterize the amplification efficiency of treated soil samples relative to controls of known infectious titer. Our results suggest large (104- to >106-fold) decreases in soil-bound prion infectivity following enzyme treatment, demonstrating that a mild enzymatic treatment could effectively reduce the risk of prion disease transmission via soil or other environmental surfaces. PMID:21571886

Isolation and characterization of diesel degrading bacteria, Sphingomonas sp. and Acinetobacter junii from petroleum contaminated soil

NASA Astrophysics Data System (ADS)

Zhang, Qiuzhuo; Wang, Duanchao; Li, Mengmeng; Xiang, Wei-Ning; Achal, Varenyam

2014-03-01

Two indigenous bacteria of petroleum contaminated soil were characterized to utilize diesel fuel as the sole carbon and energy sources in this work. 16S rRNA gene sequence analysis identified these bacteria as Sphingomonas sp. and Acinetobacter junii. The ability to degrade diesel fuel has been demonstrated for the first time by these isolates. The results of IR analyses showed that Sphingomonas sp. VA1 and A. junii VA2 degraded up to 82.6% and 75.8% of applied diesel over 15 days, respectively. In addition, Sphingomonas sp. VA1 possessed the higher cellular hydrophobicities of 94% for diesel compared to 81% by A. junii VA2. The isolates Sphingomonas sp. VA1 and A. junii VA2 exhibited 24% and 18%, respectively emulsification activity. This study reports two new diesel degrading bacterial species, which can be effectively used for bioremediation of petroleum contaminated sites.

Impact assessment of intermediate soil cover on landfill stabilization by characterizing landfilled municipal solid waste.

PubMed

Qi, Guangxia; Yue, Dongbei; Liu, Jianguo; Li, Rui; Shi, Xiaochong; He, Liang; Guo, Jingting; Miao, Haomei; Nie, Yongfeng

2013-10-15

Waste samples at different depths of a covered municipal solid waste (MSW) landfill in Beijing, China, were excavated and characterized to investigate the impact of intermediate soil cover on waste stabilization. A comparatively high amount of unstable organic matter with 83.3 g kg(-1) dry weight (dw) total organic carbon was detected in the 6-year-old MSW, where toxic inorganic elements containing As, Cd, Cr, Cu, Mn, Ni, Pb, and Zn of 10.1, 0.98, 85.49, 259.7, 530.4, 30.5, 84.0, and 981.7 mg kg(-1) dw, respectively, largely accumulated because of the barrier effect of intermediate soil cover. This accumulation resulted in decreased microbial activities. The intermediate soil cover also caused significant reduction in moisture in MSW under the soil layer, which was as low as 25.9%, and led to inefficient biodegradation of 8- and 10-year-old MSW. Therefore, intermediate soil cover with low permeability seems to act as a barrier that divides a landfill into two landfill cells with different degradation processes by restraining water flow and hazardous matter. Copyright © 2013 Elsevier Ltd. All rights reserved.

Local versus field scale soil heterogeneity characterization - a challenge for representative sampling in pollution studies

NASA Astrophysics Data System (ADS)

Kardanpour, Z.; Jacobsen, O. S.; Esbensen, K. H.

2015-06-01

This study is a contribution to development of a heterogeneity characterisation facility for "next generation" sampling aimed at more realistic and controllable pesticide variability in laboratory pots in experimental environmental contaminant assessment. The role of soil heterogeneity on quantification of a set of exemplar parameters, organic matter, loss on ignition (LOI), biomass, soil microbiology, MCPA sorption and mineralization is described, including a brief background on how heterogeneity affects sampling/monitoring procedures in environmental pollutant studies. The Theory of Sampling (TOS) and variographic analysis has been applied to develop a fit-for-purpose heterogeneity characterization approach. All parameters were assessed in large-scale profile (1-100 m) vs. small-scale (0.1-1 m) replication sampling pattern. Variographic profiles of experimental analytical results concludes that it is essential to sample at locations with less than a 2.5 m distance interval to benefit from spatial auto-correlation and thereby avoid unnecessary, inflated compositional variation in experimental pots; this range is an inherent characteristic of the soil heterogeneity and will differ among soils types. This study has a significant carrying-over potential for related research areas e.g. soil science, contamination studies, and environmental monitoring and environmental chemistry.

Lunar soil and surface processes studies

NASA Technical Reports Server (NTRS)

Glass, B. P.

1975-01-01

Glass particles in lunar soil were characterized and compared to terrestrial analogues. In addition, useful information was obtained concerning the nature of lunar surface processes (e.g. volcanism and impact), maturity of soils and chemistry and heterogeneity of lunar surface material. It is felt, however, that the most important result of the study was that it demonstrated that the investigation of glass particles from the regolith of planetary bodies with little or no atmospheres can be a powerful method for learning about the surface processes and chemistry of planetary surfaces. Thus, the return of samples from other planetary bodies (especially the terrestrial planets and asteroids) using unmanned spacecraft is urged.

Community level physiological profiles (CLPP), characterization and microbial activity of soil amended with dairy sewage sludge.

PubMed

Frąc, Magdalena; Oszust, Karolina; Lipiec, Jerzy

2012-01-01

The aim of the present work was to assess the influence of organic amendment applications compared to mineral fertilization on soil microbial activity and functional diversity. The field experiment was set up on a soil classified as an Eutric Cambisol developed from loess (South-East Poland). Two doses of both dairy sewage sludge (20 Mg·ha(-1) and 26 Mg·ha(-1)) and of mineral fertilizers containing the same amount of nutrients were applied. The same soil without any amendment was used as a control. The soil under undisturbed native vegetation was also included in the study as a representative background sample. The functional diversity (catabolic potential) was assessed using such indices as Average Well Color Development (AWCD), Richness (R) and Shannon-Weaver index (H). These indices were calculated, following the community level physiological profiling (CLPP) using Biolog Eco Plates. Soil dehydrogenase and respiratory activity were also evaluated. The indices were sensitive enough to reveal changes in community level physiological profiles due to treatment effects. It was shown that dairy sewage amended soil was characterized by greater AWCD, R, H and dehydrogenase and respiratory activity as compared to control or mineral fertilized soil. Analysis of variance (ANOVA) and principal component analysis (PCA) were used to depict the differences of the soil bacterial functional diversity between the treatments.

Community Level Physiological Profiles (CLPP), Characterization and Microbial Activity of Soil Amended with Dairy Sewage Sludge

PubMed Central

Frąc, Magdalena; Oszust, Karolina; Lipiec, Jerzy

2012-01-01

The aim of the present work was to assess the influence of organic amendment applications compared to mineral fertilization on soil microbial activity and functional diversity. The field experiment was set up on a soil classified as an Eutric Cambisol developed from loess (South-East Poland). Two doses of both dairy sewage sludge (20 Mg·ha−1 and 26 Mg·ha−1) and of mineral fertilizers containing the same amount of nutrients were applied. The same soil without any amendment was used as a control. The soil under undisturbed native vegetation was also included in the study as a representative background sample. The functional diversity (catabolic potential) was assessed using such indices as Average Well Color Development (AWCD), Richness (R) and Shannon–Weaver index (H). These indices were calculated, following the community level physiological profiling (CLPP) using Biolog Eco Plates. Soil dehydrogenase and respiratory activity were also evaluated. The indices were sensitive enough to reveal changes in community level physiological profiles due to treatment effects. It was shown that dairy sewage amended soil was characterized by greater AWCD, R, H and dehydrogenase and respiratory activity as compared to control or mineral fertilized soil. Analysis of variance (ANOVA) and principal component analysis (PCA) were used to depict the differences of the soil bacterial functional diversity between the treatments. PMID:22737006

EVALUATION OF A SOIL AMENDMENT PROCESS DEMONSTRATION FOR REDUCING THE BIOAVAILABILITY OF LEAD

EPA Science Inventory

The USEPA evaluated an in situ application of a soil amendment process at a residential site that was contaminated with lead. The goal of the evaluation was to determine if the soil amendment process resulted in lower concentrations of bioavailable lead in the contaminated soils...

Iron-bound organic carbon in forest soils: quantification and characterization

DOE PAGES

Zhao, Qian; Poulson, Simon R.; Obrist, Daniel; ...

2016-08-24

Iron oxide minerals play an important role in stabilizing organic carbon (OC) and regulating the biogeochemical cycles of OC on the earth surface. To predict the fate of OC, it is essential to understand the amount, spatial variability, and characteristics of Fe-bound OC in natural soils. In this study, we investigated the concentrations and characteristics of Fe-bound OC in soils collected from 14 forests in the United States and determined the impact of ecogeographical variables and soil physicochemical properties on the association of OC and Fe minerals. On average, Fe-bound OC contributed 37.8 % of total OC (TOC) in forestmore » soils. Atomic ratios of OC : Fe ranged from 0.56 to 17.7, with values of 1–10 for most samples, and the ratios indicate the importance of both sorptive and incorporative interactions. The fraction of Fe-bound OC in TOC (fFe-OC) was not related to the concentration of reactive Fe, which suggests that the importance of association with Fe in OC accumulation was not governed by the concentration of reactive Fe. Concentrations of Fe-bound OC and fFe-OC increased with latitude and reached peak values at a site with a mean annual temperature of 6.6 °C. Attenuated total reflectance–Fourier transform infrared spectroscopy (ATR-FTIR) and near-edge X-ray absorption fine structure (NEXAFS) analyses revealed that Fe-bound OC was less aliphatic than non-Fe-bound OC. Fe-bound OC also was more enriched in 13C compared to the non-Fe-bound OC, but C/N ratios did not differ substantially. In summary, 13C-enriched OC with less aliphatic carbon and more carboxylic carbon was associated with Fe minerals in the soils, with values of fFe-OC being controlled by both sorptive and incorporative associations between Fe and OC. Overall, this study demonstrates that Fe oxides play an important role in regulating the biogeochemical cycles of C in forest soils and uncovers the governing factors for the spatial variability and characteristics of Fe-bound OC.« less

ACTIVE SOIL DEPRESSURIZATION (ASD) DEMONSTRATION IN A LARGE BUILDING

EPA Science Inventory

The report gives results of an evaluation of the feasibility of implementing radon resistant construction techniques -- especially active soil depressurization (ASD) -- in new large buildings in Florida. Indoor radon concentrations and radon entry were monitored in a finished bui...

Isolation and characterization of oxalotrophic bacteria from tropical soils.

PubMed

Bravo, Daniel; Braissant, Olivier; Cailleau, Guillaume; Verrecchia, Eric; Junier, Pilar

2015-01-01

The oxalate-carbonate pathway (OCP) is a biogeochemical set of reactions that involves the conversion of atmospheric CO2 fixed by plants into biomass and, after the biological recycling of calcium oxalate by fungi and bacteria, into calcium carbonate in terrestrial environments. Oxalotrophic bacteria are a key element of this process because of their ability to oxidize calcium oxalate. However, the diversity and alternative carbon sources of oxalotrophs participating to this pathway are unknown. Therefore, the aim of this study was to characterize oxalotrophic bacteria in tropical OCP systems from Bolivia, India, and Cameroon. Ninety-five oxalotrophic strains were isolated and identified by sequencing of the 16S rRNA gene. Four genera corresponded to newly reported oxalotrophs (Afipia, Polaromonas, Humihabitans, and Psychrobacillus). Ten strains were selected to perform a more detailed characterization. Kinetic curves and microcalorimetry analyses showed that Variovorax soli C18 has the highest oxalate consumption rate with 0.240 µM h(-1). Moreover, Streptomyces achromogenes A9 displays the highest metabolic plasticity. This study highlights the phylogenetic and physiological diversity of oxalotrophic bacteria in tropical soils under the influence of the oxalate-carbonate pathway.

Earthworms (Eisenia fetida) demonstrate potential for use in soil bioremediation by increasing the degradation rates of heavy crude oil hydrocarbons.

PubMed

Martinkosky, Luke; Barkley, Jaimie; Sabadell, Gabriel; Gough, Heidi; Davidson, Seana

2017-02-15

Crude oil contamination widely impacts soil as a result of release during oil and gas exploration and production activities. The success of bioremediation methods to meet remediation goals often depends on the composition of the crude oil, the soil, and microbial community. Earthworms may enhance bioremediation by mixing and aerating the soil, and exposing soil microorganisms to conditions in the earthworm gut that lead to increased activity. In this study, the common composting earthworm Eisenia fetida was tested for utility to improve remediation of oil-impacted soil. E. fetida survival in soil contaminated with two distinct crude oils was tested in an artificial (lab-mixed) sandy loam soil, and survival compared to that in the clean soil. Crude oil with a high fraction of light-weight hydrocarbons was more toxic to earthworms than the crude oil with a high proportion of heavy polyaromatic and aliphatic hydrocarbons. The heavier crude oil was added to soil to create a 30,000mg/kg crude oil impacted soil, and degradation in the presence of added earthworms and feed, feed alone, or no additions was monitored over time and compared. Earthworm feed was spread on top to test effectiveness of no mixing. TPH degradation rate for the earthworm treatments was ~90mg/day slowing by 200days to ~20mg/day, producing two phases of degradation. With feed alone, the rate was ~40mg/day, with signs of slowing after 500days. Both treatments reached the same end point concentrations, and exhibited faster degradation of aliphatic hydrocarbons C21, decreased. During these experiments, soils were moderately toxic during the first three months, then earthworms survived well, were active and reproduced with petroleum hydrocarbons present. This study demonstrated that earthworms accelerate bioremediation of crude oil in soils, including the degradation of the heaviest polyaromatic fractions. Copyright © 2016 Elsevier B.V. All rights reserved.

Soil structural quality assessment for soil protection regulation

NASA Astrophysics Data System (ADS)

Johannes, Alice; Boivin, Pascal

2017-04-01

Soil quality assessment is rapidly developing worldwide, though mostly focused on the monitoring of arable land and soil fertility. Soil protection regulations assess soil quality differently, focusing on priority pollutants and threshold values. The soil physical properties are weakly considered, due to lack of consensus and experimental difficulties faced with characterization. Non-disputable, easy to perform and inexpensive methods should be available for environmental regulation to be applied, which is unfortunately not the case. As a consequence, quantitative soil physical protection regulation is not applied, and inexpensive soil physical quality indicators for arable soil management are not available. Overcoming these limitations was the objective of a research project funded by the Swiss federal office for environment (FOEN). The main results and the perspectives of application are given in this presentation. A first step of the research was to characterize soils in a good structural state (reference soils) under different land use. The structural quality was assessed with field expertise and Visual Evaluation of the Soil Structure (VESS), and the physical properties were assessed with Shrinkage analysis. The relationships between the physical properties and the soil constituents were linear and highly determined. They represent the reference properties of the corresponding soils. In a second step, the properties of physically degraded soils were analysed and compared to the reference properties. This allowed defining the most discriminant parameters departing the different structure qualities and their threshold limits. Equivalent properties corresponding to these parameters but inexpensive and easy to determine were defined and tested. More than 90% of the samples were correctly classed with this method, which meets, therefore, the requirements for practical application in regulation. Moreover, result-oriented agri-environmental schemes for soil quality

Feasibility of digital imaging to characterize earth materials : part 2.

DOT National Transportation Integrated Search

2012-06-06

This study demonstrated the feasibility of digital imaging to characterize earth materials. Two rapid, relatively low cost image-based methods were developed for determining the grain size distribution of soils and aggregates. The first method, calle...

Feasibility of digital imaging to characterize earth materials : part 6.

DOT National Transportation Integrated Search

2012-06-06

This study demonstrated the feasibility of digital imaging to characterize earth materials. Two rapid, relatively low cost image-based methods were developed for determining the grain size distribution of soils and aggregates. The first method, calle...

Feasibility of digital imaging to characterize earth materials : part 3.

DOT National Transportation Integrated Search

2012-06-06

This study demonstrated the feasibility of digital imaging to characterize earth materials. Two rapid, relatively low cost image-based methods were developed for determining the grain size distribution of soils and aggregates. The first method, calle...

Feasibility of digital imaging to characterize earth materials : part 1.

DOT National Transportation Integrated Search

2012-06-06

This study demonstrated the feasibility of digital imaging to characterize earth materials. Two rapid, relatively low cost image-based methods were developed for determining the grain size distribution of soils and aggregates. The first method, calle...

Feasibility of digital imaging to characterize earth materials : part 4.

DOT National Transportation Integrated Search

2012-06-06

This study demonstrated the feasibility of digital imaging to characterize earth materials. Two rapid, relatively low cost image-based methods were developed for determining the grain size distribution of soils and aggregates. The first method, calle...

Feasibility of digital imaging to characterize earth materials : part 5.

DOT National Transportation Integrated Search

2012-05-06

This study demonstrated the feasibility of digital imaging to characterize earth materials. Two rapid, relatively low cost image-based methods were developed for determining the grain size distribution of soils and aggregates. The first method, calle...

Fractionation and characterization of soil organic carbon during transition to organic farming

NASA Astrophysics Data System (ADS)

Abdelrahman, H.; Olk, D.; Cocozza, C.; Miano, T.

2012-04-01

The transition from conventional to organic farming is the most difficult period faced by organic growers as it could be characterized by unstable conditions, such as nutrient availability, production reductions, mineralization extents. As soil organic matter (SOM), specifically soil organic carbon (SOC), is known to play important roles in maintenance and improvement of many soil properties, it is important to define its changes during the transition period. Total SOC might not be the suitable tool to track the changes in organically based soil fertility within a 3- to 5-yr transition period. Labile fractions that are important for nutrient cycling and supply are likely to be controlled by management to a much greater extent than is total SOM. Two field experiments, in south of Italy, were established in 2009 to study the changes in SOC during transition to organic farming. Experiments included a cereal/leguminous rotation with triplicates treatments of permitted amendments (compost and fertilizers). Soils were sampled at the beginning of the project, and after each crop harvest in 2010 and 2011. A sequential fractionation procedure was used to separate different SOC-fractions: light fraction (LF), two size classes of particulate organic matter (POM), mobile humic acid (MHA) and Ca++ bound humic acid (CaHA). Isolated fractions were quantified and analyzed for their content of C, N, carbohydrates and amino compounds fingerprints. The obtained results showed that compost application contributed to significantly higher quantities of LF, POM and MHA than did fertilizers application. Carbohydrates content decreased in LF while increased noticeably in POM and slightly in MHA fractions, which indicates that decomposing materials are converted, within the time span of humification, from young fractions into more mature fractions. Amino compounds were found to provide up to 40% of total soil N with a major contribution of the humified fractions, MHA and CaHA. The utilized

Microscopic and spectroscopic characterization of humic substances from a compost amended copper contaminated soil: main features and their potential effects on Cu immobilization.

PubMed

Medina, Jorge; Monreal, Carlos; Chabot, Denise; Meier, Sebastián; González, María Eugenia; Morales, Esteban; Parillo, Rita; Borie, Fernando; Cornejo, Pablo

2017-06-01

We characterized humic substances (HS) extracted from a Cu-contaminated soil without compost addition (C) or amended with a wheat straw-based compost (WSC) (H1), co-composted with Fe 2 O 3 (H2), or co-composted with an allophane-rich soil (H3). Extracted HS were characterized under electron microscopy (SEM/TEM), energy-dispersive X-ray (X-EDS), and Fourier transform infrared (FTIR) spectroscopy. In addition, HS extracted from WSC (H4) were characterized at pH 4.0 and 8.0 with descriptive purposes. At pH 4.0, globular structures of H4 were observed, some of them aggregating within a large network. Contrariwise, at pH 8.0, long tubular and disaggregated structures prevailed. TEM microscopy suggests organo-mineral interactions at scales of 1 to 200 nm with iron oxide nanoparticles. HS extracted from soil-compost incubations showed interactions at nanoscale with minerals and crystal compounds into the organic matrix of HS. Bands associated to acidic functional groups of HS may suggest potential sorption interactions with transition metals. We conclude that metal ions and pH have an important role controlling the morphology and configuration of HS from WSC. Characterization of H4 extracted from WSC showed that physicochemical protection of HS could be present in composting systems treated with inorganic materials. Finally, the humified fractions obtained from compost-amended soils may have an important effect on metal-retention, supporting their potential use in metal-contaminated soils.

Characterization of Soil Suppressiveness to Root-Knot Nematodes in Organic Horticulture in Plastic Greenhouse

PubMed Central

Giné, Ariadna; Carrasquilla, Marc; Martínez-Alonso, Maira; Gaju, Núria; Sorribas, Francisco J.

2016-01-01

The fluctuation of Meloidogyne population density and the percentage of fungal egg parasitism were determined from July 2011 to July 2013 in two commercial organic vegetable production sites (M10.23 and M10.55) in plastic greenhouses, located in northeastern Spain, in order to know the level of soil suppressiveness. Fungal parasites were identified by molecular methods. In parallel, pot tests characterized the level of soil suppressiveness and the fungal species growing from the eggs. In addition, the egg parasitic ability of 10 fungal isolates per site was also assessed. The genetic profiles of fungal and bacterial populations from M10.23 and M10.55 soils were obtained by Denaturing Gradient Gel Electrophoresis (DGGE), and compared with a non-suppressive soil (M10.33). In M10.23, Meloidogyne population in soil decreased progressively throughout the rotation zucchini, tomato, and radish or spinach. The percentage of egg parasitism was 54.7% in zucchini crop, the only one in which eggs were detected. Pochonia chlamydosporia was the only fungal species isolated. In M10.55, nematode densities peaked at the end of the spring-summer crops (tomato, zucchini, and cucumber), but disease severity was lower than expected (0.2–6.3). The percentage of fungal egg parasitism ranged from 3 to 84.5% in these crops. The results in pot tests confirmed the suppressiveness of the M10.23 and M10.55 soils against Meloidogyne. The number of eggs per plant and the reproduction factor of the population were reduced (P < 0.05) in both non-sterilized soils compared to the sterilized ones after one nematode generation. P. chlamydosporia was the only fungus isolated from Meloidogyne eggs. In in vitro tests, P. chlamydosporia isolates were able to parasitize Meloidogyne eggs from 50 to 97% irrespective of the site. DGGE fingerprints revealed a high diversity in the microbial populations analyzed. Furthermore, both bacterial and fungal genetic patterns differentiated suppressive from non

Characterization of Soil Suppressiveness to Root-Knot Nematodes in Organic Horticulture in Plastic Greenhouse.

PubMed

Giné, Ariadna; Carrasquilla, Marc; Martínez-Alonso, Maira; Gaju, Núria; Sorribas, Francisco J

2016-01-01

The fluctuation of Meloidogyne population density and the percentage of fungal egg parasitism were determined from July 2011 to July 2013 in two commercial organic vegetable production sites (M10.23 and M10.55) in plastic greenhouses, located in northeastern Spain, in order to know the level of soil suppressiveness. Fungal parasites were identified by molecular methods. In parallel, pot tests characterized the level of soil suppressiveness and the fungal species growing from the eggs. In addition, the egg parasitic ability of 10 fungal isolates per site was also assessed. The genetic profiles of fungal and bacterial populations from M10.23 and M10.55 soils were obtained by Denaturing Gradient Gel Electrophoresis (DGGE), and compared with a non-suppressive soil (M10.33). In M10.23, Meloidogyne population in soil decreased progressively throughout the rotation zucchini, tomato, and radish or spinach. The percentage of egg parasitism was 54.7% in zucchini crop, the only one in which eggs were detected. Pochonia chlamydosporia was the only fungal species isolated. In M10.55, nematode densities peaked at the end of the spring-summer crops (tomato, zucchini, and cucumber), but disease severity was lower than expected (0.2-6.3). The percentage of fungal egg parasitism ranged from 3 to 84.5% in these crops. The results in pot tests confirmed the suppressiveness of the M10.23 and M10.55 soils against Meloidogyne. The number of eggs per plant and the reproduction factor of the population were reduced (P < 0.05) in both non-sterilized soils compared to the sterilized ones after one nematode generation. P. chlamydosporia was the only fungus isolated from Meloidogyne eggs. In in vitro tests, P. chlamydosporia isolates were able to parasitize Meloidogyne eggs from 50 to 97% irrespective of the site. DGGE fingerprints revealed a high diversity in the microbial populations analyzed. Furthermore, both bacterial and fungal genetic patterns differentiated suppressive from non

Characterization of sorption properties of selected soils from Lublin region by using water vapour adsorption method

NASA Astrophysics Data System (ADS)

Skic, Kamil; Boguta, Patrycja; Sokołowska, Zofia

2016-04-01

*The studies were carried out within the framework of a research project. The project was financed from funds of National Science Center on the base of decision number DEC-2013/11/D/NZ9/02545 Among many methods proposed to study sorption properties of soils an analysis of adsorption/ desorption isotherm is probably the easiest and most convenient one. It characterizes both quantity and quality of mineral and organic components and also their physical and physicochemical properties. The main aim of this study is comparison of sorption properties of selected Polish soils by using water vapour adsorption method. Samples were taken from the depth of 0-20 cm, from the Lublin region, eastern Poland. Soils were selected on the basis of their different physicochemical properties and were classified as: Haplic Fluvisol, Haplic Chernozem, Mollic Gleysol, Rendzic Phaeozem, Stagnic Luvisol, Haplic Cambisol (WG WRB 2006). Data taken from experimental adsorption isotherms were used to determine parameters of monolayer capacity, specific surface area and the total amount of vapour adsorbed at relative pressure of 0.974. Obtained adsorption and desorption isotherms reviled that adsorbate molecules interacted with the soil particles in different extent. Similar monolayer capacity was observed for Haplic Fluvisol, Haplic Chernozem and Stagnic Luvisol, while for Mollic Gleysol was more than 4 times higher. Mollic Gleysol was also characterized by highest values of specific surface area as well as quantity of adsorbed vapour at relative pressure of 0.974. Higher sorption was caused by presence of soil colloids which contains functional groups of a polar nature (mainly hydroxyls, phenolic and carboxyls). These groups similarly to silicates, oxides, hydratable cations as well as electric charge form adsorption centres for water vapour molecules.

Poland petroleum refinery sludge lagoon demonstration project

DOE Office of Scientific and Technical Information (OSTI.GOV)

Altman, D.J.

The US Department of Energy and the Institute for Ecology of Industrial Area have been working together to develop mutually beneficial, cost-effective environmental remediation technologies such as the demonstration of bioremediation techniques for the clean up of acidic petroleum sludge impacted soils at an oil refinery in southern Poland. After an expedited site characterization, treatability study, and a risk assessment study, a remediation strategy was devised. The waste material was composed primarily of high molecular weight paraffinic and polynuclear aromatic hydrocarbons. A biopile design which employed a combination of passive and active aeration in conjunction with nutrient and surfactant applicationmore » as used to increase the biodegradation of the contaminants of concern.« less

Metagenomic Characterization and Biochemical Analysis of Cellulose-Degrading Bacterial Communities from Sheep Rumen, Termite Hindgut, Decaying Plant Materials, and Soil

DTIC Science & Technology

2016-01-04

Biochemical Analysis of Cellulose-DegradingBacterial Communities from Sheep Rumen, Termite Hindgut, Decaying Plant Materials,and Soil In an effort to...degrading bacteria from various samples, including termite gut, sheep rumen, soil, and decaying plant materials. Using selective media culture with...Metagenomic Characterization and Biochemical Analysis of Cellulose-DegradingBacterial Communities from Sheep Rumen, Termite Hindgut, Decaying Plant

NMR characterization and sorption behavior of agricultural and forest soil humic substances

NASA Astrophysics Data System (ADS)

Li, Chengliang; Berns, Anne E.; Séquaris, Jean-Marie; Klumpp, Erwin

2010-05-01

Humic substances are the predominant components of the organic matter in the terrestrial system, which are not only important for the physicochemical properties of soil but are also dominant factors for controlling the environmental behaviors and fates of some organic contaminants, such as hydrophobic compounds. Nonylphenol [4-(1-ethyl-1, 3 dimethylpentyl) phenol] (NP), a ubiquitous hydrophobic pollutant, has recently focused the attention owing to its endocrine disruptors property. Sorption behavior of NP on humic substances, which were isolated from agricultural and forest soils, was investigated by using the dialysis technique at room temperature. 14C-labeled NP was used to quantify the partitioning behavior. Humic substances were characterized by 13C Cross-Polarization/Magic-Angle-Spinning Nuclear Magnetic Resonance (CP/MAS NMR). The results showed that the partition parameters of NP on various humic acids were slightly different. Relationships between partition coefficients and the functional groups of humic substances identified by CP/MAS NMR were analyzed.

A multi-scale ''soil water structure'' model based on the pedostructure concept

NASA Astrophysics Data System (ADS)

Braudeau, E.; Mohtar, R. H.; El Ghezal, N.; Crayol, M.; Salahat, M.; Martin, P.

2009-02-01

Current soil water models do not take into account the internal organization of the soil medium and, a fortiori, the physical interaction between the water film surrounding the solid particles of the soil structure, and the surface charges of this structure. In that sense they empirically deal with the physical soil properties that are all generated from this soil water-structure interaction. As a result, the thermodynamic state of the soil water medium, which constitutes the local physical conditions, namely the pedo-climate, for biological and geo-chemical processes in soil, is not defined in these models. The omission of soil structure from soil characterization and modeling does not allow for coupling disciplinary models for these processes with soil water models. This article presents a soil water structure model, Kamel®, which was developed based on a new paradigm in soil physics where the hierarchical soil structure is taken into account allowing for defining its thermodynamic properties. After a review of soil physics principles which forms the basis of the paradigm, we describe the basic relationships and functionality of the model. Kamel® runs with a set of 15 soil input parameters, the pedohydral parameters, which are parameters of the physically-based equations of four soil characteristic curves that can be measured in the laboratory. For cases where some of these parameters are not available, we show how to estimate these parameters from commonly available soil information using published pedotransfer functions. A published field experimental study on the dynamics of the soil moisture profile following a pounded infiltration rainfall event was used as an example to demonstrate soil characterization and Kamel® simulations. The simulated soil moisture profile for a period of 60 days showed very good agreement with experimental field data. Simulations using input data calculated from soil texture and pedotransfer functions were also generated

13C NMR spectroscopy characterization of particle-size fractionated soil organic carbon in subalpine forest and grassland ecosystems.

PubMed

Shiau, Yo-Jin; Chen, Jenn-Shing; Chung, Tay-Lung; Tian, Guanglong; Chiu, Chih-Yu

2017-12-01

Soil organic carbon (SOC) and carbon (C) functional groups in different particle-size fractions are important indicators of microbial activity and soil decomposition stages under wildfire disturbances. This research investigated a natural Tsuga forest and a nearby fire-induced grassland along a sampling transect in Central Taiwan with the aim to better understand the effect of forest wildfires on the change of SOC in different soil particle scales. Soil samples were separated into six particle sizes and SOC was characterized by solid-state 13 C nuclear magnetic resonance spectroscopy in each fraction. The SOC content was higher in forest than grassland soil in the particle-size fraction samples. The O-alkyl-C content (carbohydrate-derived structures) was higher in the grassland than the forest soils, but the alkyl-C content (recalcitrant substances) was higher in forest than grassland soils, for a higher humification degree (alkyl-C/O-alkyl-C ratio) in forest soils for all the soil particle-size fractions. High humification degree was found in forest soils. The similar aromaticity between forest and grassland soils might be attributed to the fire-induced aromatic-C content in the grassland that offsets the original difference between the forest and grassland. High alkyl-C content and humification degree and low C/N ratios in the fine particle-size fractions implied that undecomposed recalcitrant substances tended to accumulate in the fine fractions of soils.

Interpolation Approaches for Characterizing Spatial Variability of Soil Properties in Tuz Lake Basin of Turkey

NASA Astrophysics Data System (ADS)

Gorji, Taha; Sertel, Elif; Tanik, Aysegul

2017-12-01

Soil management is an essential concern in protecting soil properties, in enhancing appropriate soil quality for plant growth and agricultural productivity, and in preventing soil erosion. Soil scientists and decision makers require accurate and well-distributed spatially continuous soil data across a region for risk assessment and for effectively monitoring and managing soils. Recently, spatial interpolation approaches have been utilized in various disciplines including soil sciences for analysing, predicting and mapping distribution and surface modelling of environmental factors such as soil properties. The study area selected in this research is Tuz Lake Basin in Turkey bearing ecological and economic importance. Fertile soil plays a significant role in agricultural activities, which is one of the main industries having great impact on economy of the region. Loss of trees and bushes due to intense agricultural activities in some parts of the basin lead to soil erosion. Besides, soil salinization due to both human-induced activities and natural factors has exacerbated its condition regarding agricultural land development. This study aims to compare capability of Local Polynomial Interpolation (LPI) and Radial Basis Functions (RBF) as two interpolation methods for mapping spatial pattern of soil properties including organic matter, phosphorus, lime and boron. Both LPI and RBF methods demonstrated promising results for predicting lime, organic matter, phosphorous and boron. Soil samples collected in the field were used for interpolation analysis in which approximately 80% of data was used for interpolation modelling whereas the remaining for validation of the predicted results. Relationship between validation points and their corresponding estimated values in the same location is examined by conducting linear regression analysis. Eight prediction maps generated from two different interpolation methods for soil organic matter, phosphorus, lime and boron parameters

Ames expedited site characterization demonstration at the former manufactured gas plant site, Marshalltown, Iowa

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bevolo, A.J.; Kjartanson, B.H.; Wonder, J.D.

1996-03-01

The goal of the Ames Expedited Site Characterization (ESC) project is to evaluate and promote both innovative technologies (IT) and state-of-the-practice technologies (SOPT) for site characterization and monitoring. In April and May 1994, the ESC project conducted site characterization, technology comparison, and stakeholder demonstration activities at a former manufactured gas plant (FMGP) owned by Iowa Electric Services (IES) Utilities, Inc., in Marshalltown, Iowa. Three areas of technology were fielded at the Marshalltown FMGP site: geophysical, analytical and data integration. The geophysical technologies are designed to assess the subsurface geological conditions so that the location, fate and transport of the targetmore » contaminants may be assessed and forecasted. The analytical technologies/methods are designed to detect and quantify the target contaminants. The data integration technology area consists of hardware and software systems designed to integrate all the site information compiled and collected into a conceptual site model on a daily basis at the site; this conceptual model then becomes the decision-support tool. Simultaneous fielding of different methods within each of the three areas of technology provided data for direct comparison of the technologies fielded, both SOPT and IT. This document reports the results of the site characterization, technology comparison, and ESC demonstration activities associated with the Marshalltown FMGP site. 124 figs., 27 tabs.« less

Characterization of Trapped Lignin-Degrading Microbes in Tropical Forest Soil

DOE Office of Scientific and Technical Information (OSTI.GOV)

DeAngelis, Kristen M.; Allgaier, Martin; Chavarria, Yaucin

2011-04-29

Lignin is often the most difficult portion of plant biomass to degrade, with fungi generally thought to dominate during late stage decomposition. Lignin in feedstock plant material represents a barrier to more efficient plant biomass conversion and can also hinder enzymatic access to cellulose, which is critical for biofuels production. Tropical rain forest soils in Puerto Rico are characterized by frequent anoxic conditions and fluctuating redox, suggesting the presence of lignin-degrading organisms and mechanisms that are different from known fungal decomposers and oxygen-dependent enzyme activities. We explored microbial lignin-degraders by burying bio-traps containing lignin-amended and unamended biosep beads in themore » soil for 1, 4, 13 and 30 weeks. At each time point, phenol oxidase and peroxidase enzyme activity was found to be elevated in the lignin-amended versus the unamended beads, while cellulolytic enzyme activities were significantly depressed in lignin-amended beads. Quantitative PCR of bacterial communities showed more bacterial colonization in the lignin-amended compared to the unamended beads after one and four weeks, suggesting that the lignin supported increased bacterial abundance. The microbial community was analyzed by small subunit 16S ribosomal RNA genes using microarray (PhyloChip) and by high-throughput amplicon pyrosequencing based on universal primers targeting bacterial, archaeal, and eukaryotic communities. Community trends were significantly affected by time and the presence of lignin on the beads. Lignin-amended beads have higher relative abundances of representatives from the phyla Actinobacteria, Firmicutes, Acidobacteria and Proteobacteria compared to unamended beads. This study suggests that in low and fluctuating redox soils, bacteria could play a role in anaerobic lignin decomposition.« less

Characterization of trapped lignin-degrading microbes in tropical forest soil

DOE Office of Scientific and Technical Information (OSTI.GOV)

DeAngelis, K.M.; Allgaier, M.; Chavarria, Y.

2011-03-01

Lignin is often the most difficult portion of plant biomass to degrade, with fungi generally thought to dominate during late stage decomposition. Lignin in feedstock plant material represents a barrier to more efficient plant biomass conversion and can also hinder enzymatic access to cellulose, which is critical for biofuels production. Tropical rain forest soils in Puerto Rico are characterized by frequent anoxic conditions and fluctuating redox, suggesting the presence of lignin-degrading organisms and mechanisms that are different from known fungal decomposers and oxygen-dependent enzyme activities. We explored microbial lignin-degraders by burying bio-traps containing lignin-amended and unamended biosep beads in themore » soil for 1, 4, 13 and 30 weeks. At each time point, phenol oxidase and peroxidase enzyme activity was found to be elevated in the lignin-amended versus the unamended beads, while cellulolytic enzyme activities were significantly depressed in lignin-amended beads. Quantitative PCR of bacterial communities showed more bacterial colonization in the lignin-amended compared to the unamended beads after one and four weeks, suggesting that the lignin supported increased bacterial abundance. The microbial community was analyzed by small subunit 16S ribosomal RNA genes using microarray (PhyloChip) and by high-throughput amplicon pyrosequencing based on universal primers targeting bacterial, archaeal, and eukaryotic communities. Community trends were significantly affected by time and the presence of lignin on the beads. Lignin-amended beads have higher relative abundances of representatives from the phyla Actinobacteria, Firmicutes, Acidobacteria and Proteobacteria compared to unamended beads. This study suggests that in low and fluctuating redox soils, bacteria could play a role in anaerobic lignin decomposition.« less

Characterization of Trapped Lignin-Degrading Microbes in Tropical Forest Soil

DOE Office of Scientific and Technical Information (OSTI.GOV)

DeAngelis, Kristen; Allgaier, Martin; Chavarria, Yaucin

2011-07-14

Lignin is often the most difficult portion of plant biomass to degrade, with fungi generally thought to dominate during late stage decomposition. Lignin in feedstock plant material represents a barrier to more efficient plant biomass conversion and can also hinder enzymatic access to cellulose, which is critical for biofuels production. Tropical rain forest soils in Puerto Rico are characterized by frequent anoxic conditions and fluctuating redox, suggesting the presence of lignin-degrading organisms and mechanisms that are different from known fungal decomposers and oxygen-dependent enzyme activities. We explored microbial lignin-degraders by burying bio-traps containing lignin-amended and unamended biosep beads in themore » soil for 1, 4, 13 and 30 weeks. At each time point, phenol oxidase and peroxidase enzyme activity was found to be elevated in the lignin-amended versus the unamended beads, while cellulolytic enzyme activities were significantly depressed in lignin-amended beads. Quantitative PCR of bacterial communities showed more bacterial colonization in the lignin-amended compared to the unamended beads after one and four weeks, suggesting that the lignin supported increased bacterial abundance. The microbial community was analyzed by small subunit 16S ribosomal RNA genes using microarray (PhyloChip) and by high-throughput amplicon pyrosequencing based on universal primers targeting bacterial, archaeal, and eukaryotic communities. Community trends were significantly affected by time and the presence of lignin on the beads. Lignin-amended beads have higher relative abundances of representatives from the phyla Actinobacteria, Firmicutes, Acidobacteria and Proteobacteria compared to unamended beads. This study suggests that in low and fluctuating redox soils, bacteria could play a role in anaerobic lignin decomposition.« less

Characterization of Trapped Lignin-Degrading Microbes in Tropical Forest Soil

PubMed Central

DeAngelis, Kristen M.; Allgaier, Martin; Chavarria, Yaucin; Fortney, Julian L.; Hugenholtz, Phillip; Simmons, Blake; Sublette, Kerry; Silver, Whendee L.; Hazen, Terry C.

2011-01-01

Lignin is often the most difficult portion of plant biomass to degrade, with fungi generally thought to dominate during late stage decomposition. Lignin in feedstock plant material represents a barrier to more efficient plant biomass conversion and can also hinder enzymatic access to cellulose, which is critical for biofuels production. Tropical rain forest soils in Puerto Rico are characterized by frequent anoxic conditions and fluctuating redox, suggesting the presence of lignin-degrading organisms and mechanisms that are different from known fungal decomposers and oxygen-dependent enzyme activities. We explored microbial lignin-degraders by burying bio-traps containing lignin-amended and unamended biosep beads in the soil for 1, 4, 13 and 30 weeks. At each time point, phenol oxidase and peroxidase enzyme activity was found to be elevated in the lignin-amended versus the unamended beads, while cellulolytic enzyme activities were significantly depressed in lignin-amended beads. Quantitative PCR of bacterial communities showed more bacterial colonization in the lignin-amended compared to the unamended beads after one and four weeks, suggesting that the lignin supported increased bacterial abundance. The microbial community was analyzed by small subunit 16S ribosomal RNA genes using microarray (PhyloChip) and by high-throughput amplicon pyrosequencing based on universal primers targeting bacterial, archaeal, and eukaryotic communities. Community trends were significantly affected by time and the presence of lignin on the beads. Lignin-amended beads have higher relative abundances of representatives from the phyla Actinobacteria, Firmicutes, Acidobacteria and Proteobacteria compared to unamended beads. This study suggests that in low and fluctuating redox soils, bacteria could play a role in anaerobic lignin decomposition. PMID:21559391

Soil Structure - A Neglected Component of Land-Surface Models

NASA Astrophysics Data System (ADS)

Fatichi, S.; Or, D.; Walko, R. L.; Vereecken, H.; Kollet, S. J.; Young, M.; Ghezzehei, T. A.; Hengl, T.; Agam, N.; Avissar, R.

2017-12-01

Soil structure is largely absent in most standard sampling and measurements and in the subsequent parameterization of soil hydraulic properties deduced from soil maps and used in Earth System Models. The apparent omission propagates into the pedotransfer functions that deduce parameters of soil hydraulic properties primarily from soil textural information. Such simple parameterization is an essential ingredient in the practical application of any land surface model. Despite the critical role of soil structure (biopores formed by decaying roots, aggregates, etc.) in defining soil hydraulic functions, only a few studies have attempted to incorporate soil structure into models. They mostly looked at the effects on preferential flow and solute transport pathways at the soil profile scale; yet, the role of soil structure in mediating large-scale fluxes remains understudied. Here, we focus on rectifying this gap and demonstrating potential impacts on surface and subsurface fluxes and system wide eco-hydrologic responses. The study proposes a systematic way for correcting the soil water retention and hydraulic conductivity functions—accounting for soil-structure—with major implications for near saturated hydraulic conductivity. Modification to the basic soil hydraulic parameterization is assumed as a function of biological activity summarized by Gross Primary Production. A land-surface model with dynamic vegetation is used to carry out numerical simulations with and without the role of soil-structure for 20 locations characterized by different climates and biomes across the globe. Including soil structure affects considerably the partition between infiltration and runoff and consequently leakage at the base of the soil profile (recharge). In several locations characterized by wet climates, a few hundreds of mm per year of surface runoff become deep-recharge accounting for soil-structure. Changes in energy fluxes, total evapotranspiration and vegetation productivity

Characterization of biosurfactants from indigenous soil bacteria recovered from oil contaminated sites.

PubMed

Kumar, Govind; Kumar, Rajesh; Sharma, Anita

2015-09-01

Three bacterial isolates (G1, G2 and G3) characterized as Pseudomonas plecoglossicida, Lysinibacillus fusiformis and Bacillus safensis were recovered from contaminated soil of oil refinery. These bacterial isolates produced biosurfactants in MSM medium in stationary phase. Biosurfactants were characterized on the basis of their emulsifying properties with petrol, diesel, mobil oil and petrol engine oil. Reduction in surface tension (below 40 mN m(-1)) and blood hemolysis were also included in biosurfactants characterization. Emulsification indices of G1, G2 and G3 were in the range of 98.82, 23.53 and 58.82 for petrol; 29.411,1.05 and 70.588 for diesel; 35.31, 2.93 and 17.60 for mobil oil and 35.284, 58.82 and 17.647 for petrol engine oil respectively. Dry weight of the extracted biosurfactant was 4.6, 1.4 and 2.4 g I(-1) for G1, G2 and G3 respectively. Structural analysis of the biosurfactants by Fourier Transform Infrared Spectroscopy (FTIR) revealed significant differences in the bonding pattern of individual biosurfactant.

Urban soil exploration through multi-receiver electromagnetic induction and stepped-frequency ground penetrating radar.

PubMed

Van De Vijver, Ellen; Van Meirvenne, Marc; Vandenhaute, Laura; Delefortrie, Samuël; De Smedt, Philippe; Saey, Timothy; Seuntjens, Piet

2015-07-01

In environmental assessments, the characterization of urban soils relies heavily on invasive investigation, which is often insufficient to capture their full spatial heterogeneity. Non-invasive geophysical techniques enable rapid collection of high-resolution data and provide a cost-effective alternative to investigate soil in a spatially comprehensive way. This paper presents the results of combining multi-receiver electromagnetic induction and stepped-frequency ground penetrating radar to characterize a former garage site contaminated with petroleum hydrocarbons. The sensor combination showed the ability to identify and accurately locate building remains and a high-density soil layer, thus demonstrating the high potential to investigate anthropogenic disturbances of physical nature. In addition, a correspondence was found between an area of lower electrical conductivity and elevated concentrations of petroleum hydrocarbons, suggesting the potential to detect specific chemical disturbances. We conclude that the sensor combination provides valuable information for preliminary assessment of urban soils.

Distributed Soil Moisture Estimation in a Mountainous Semiarid Basin: Constraining Soil Parameter Uncertainty through Field Studies

NASA Astrophysics Data System (ADS)

Yatheendradas, S.; Vivoni, E.

2007-12-01

A common practice in distributed hydrological modeling is to assign soil hydraulic properties based on coarse textural datasets. For semiarid regions with poor soil information, the performance of a model can be severely constrained due to the high model sensitivity to near-surface soil characteristics. Neglecting the uncertainty in soil hydraulic properties, their spatial variation and their naturally-occurring horizonation can potentially affect the modeled hydrological response. In this study, we investigate such effects using the TIN-based Real-time Integrated Basin Simulator (tRIBS) applied to the mid-sized (100 km2) Sierra Los Locos watershed in northern Sonora, Mexico. The Sierra Los Locos basin is characterized by complex mountainous terrain leading to topographic organization of soil characteristics and ecosystem distributions. We focus on simulations during the 2004 North American Monsoon Experiment (NAME) when intensive soil moisture measurements and aircraft- based soil moisture retrievals are available in the basin. Our experiments focus on soil moisture comparisons at the point, topographic transect and basin scales using a range of different soil characterizations. We compare the distributed soil moisture estimates obtained using (1) a deterministic simulation based on soil texture from coarse soil maps, (2) a set of ensemble simulations that capture soil parameter uncertainty and their spatial distribution, and (3) a set of simulations that conditions the ensemble on recent soil profile measurements. Uncertainties considered in near-surface soil characterization provide insights into their influence on the modeled uncertainty, into the value of soil profile observations, and into effective use of on-going field observations for constraining the soil moisture response uncertainty.

Extraction and characterization of ternary complexes between natural organic matter, cations, and oxyanions from a natural soil.

PubMed

Peel, Hannah R; Martin, David P; Bednar, Anthony J

2017-06-01

Natural organic matter (NOM) can have a significant influence on the mobility and fate of inorganic oxyanions, such as arsenic and selenium, in the environment. There is evidence to suggest that interactions between NOM and these oxyanions are facilitated by bridging cations (primarily Fe 3+ ) through the formation of ternary complexes. Building on previous work characterizing ternary complexes formed in the laboratory using purified NOM, this study describes the extraction and characterization of intact ternary complexes directly from a soil matrix. The complexes are stable to the basic extraction conditions (pH 12) and do not appear to change when the pH of the extract is adjusted back to neutral. The results suggest that ternary complexes between NOM, cations, and inorganic oxyanions exist in natural soils and could play a role in the speciation of inorganic oxyanions in environmental matrices. Published by Elsevier Ltd.

Properties of Subsurface Soil Cores from Four Geologic Provinces Surrounding Mars Desert Research Station, Utah: Characterizing Analog Martian Soil in a Human Exploration Scenario

NASA Technical Reports Server (NTRS)

Stoker, C. R.; Clarke, J. D. A.; Direito, S.; Foing, B.

2011-01-01

The DOMEX program is a NASA-MMAMA funded project featuring simulations of human crews on Mars focused on science activities that involve collecting samples from the subsurface using both manual and robotic equipment methods and analyzing them in the field and post mission. A crew simulating a human mission to Mars performed activities focused on subsurface science for 2 weeks in November 2009 at Mars Desert Research Station near Hanksville, Utah --an important chemical and morphological Mars analog site. Activities performed included 1) survey of the area to identify geologic provinces, 2) obtaining soil and rock samples from each province and characterizing their mineralogy, chemistry, and biology; 3) site selection and reconnaissance for a future drilling mission; 4) deployment and testing of Mars Underground Mole, a percussive robotic soil sampling device; and 5) recording and analyzing how crew time was used to accomplish these tasks. This paper summarizes results from analysis of soil cores

Soil carbon storage estimation in a forested watershed using quantitative soil-landscape modeling

Treesearch

James A. Thompson; Randall K. Kolka

2005-01-01

Carbon storage in soils is important to forest ecosystems. Moreover, forest soils may serve as important C sinks for ameliorating excess atmospheric CO2. Spatial estimates of soil organic C (SOC) storage have traditionally relied upon soil survey maps and laboratory characterization data. This approach does not account for inherent variability...

Contaminant gradients in trees: Directional tree coring reveals boundaries of soil and soil-gas contamination with potential applications in vapor intrusion assessment

USGS Publications Warehouse

Wilson, Jordan L.; Samaranayake, V.A.; Limmer, Matthew A.; Schumacher, John G.; Burken, Joel G.

2017-01-01

Contaminated sites pose ecological and human-health risks through exposure to contaminated soil and groundwater. Whereas we can readily locate, monitor, and track contaminants in groundwater, it is harder to perform these tasks in the vadose zone. In this study, tree-core samples were collected at a Superfund site to determine if the sample-collection location around a particular tree could reveal the subsurface location, or direction, of soil and soil-gas contaminant plumes. Contaminant-centroid vectors were calculated from tree-core data to reveal contaminant distributions in directional tree samples at a higher resolution, and vectors were correlated with soil-gas characterization collected using conventional methods. Results clearly demonstrated that directional tree coring around tree trunks can indicate gradients in soil and soil-gas contaminant plumes, and the strength of the correlations were directly proportionate to the magnitude of tree-core concentration gradients (spearman’s coefficient of -0.61 and -0.55 in soil and tree-core gradients, respectively). Linear regression indicates agreement between the concentration-centroid vectors is significantly affected by in-planta and soil concentration gradients and when concentration centroids in soil are closer to trees. Given the existing link between soil-gas and vapor intrusion, this study also indicates that directional tree coring might be applicable in vapor intrusion assessment.

Contaminant Gradients in Trees: Directional Tree Coring Reveals Boundaries of Soil and Soil-Gas Contamination with Potential Applications in Vapor Intrusion Assessment.

PubMed

Wilson, Jordan L; Samaranayake, V A; Limmer, Matthew A; Schumacher, John G; Burken, Joel G

2017-12-19

Contaminated sites pose ecological and human-health risks through exposure to contaminated soil and groundwater. Whereas we can readily locate, monitor, and track contaminants in groundwater, it is harder to perform these tasks in the vadose zone. In this study, tree-core samples were collected at a Superfund site to determine if the sample-collection location around a particular tree could reveal the subsurface location, or direction, of soil and soil-gas contaminant plumes. Contaminant-centroid vectors were calculated from tree-core data to reveal contaminant distributions in directional tree samples at a higher resolution, and vectors were correlated with soil-gas characterization collected using conventional methods. Results clearly demonstrated that directional tree coring around tree trunks can indicate gradients in soil and soil-gas contaminant plumes, and the strength of the correlations were directly proportionate to the magnitude of tree-core concentration gradients (spearman's coefficient of -0.61 and -0.55 in soil and tree-core gradients, respectively). Linear regression indicates agreement between the concentration-centroid vectors is significantly affected by in planta and soil concentration gradients and when concentration centroids in soil are closer to trees. Given the existing link between soil-gas and vapor intrusion, this study also indicates that directional tree coring might be applicable in vapor intrusion assessment.

Micromorphological Aspects of Forensic Geopedology II: Ultramicroscopic vs Microscopic Characterization of Phosphatic Impregnations on Soil Particles in Experimental Burials

NASA Astrophysics Data System (ADS)

Ern, S. I. E.; Trombino, L.; Cattaneo, C.

2012-04-01

Grows up the importance of the role played by soil scientists in the modern forensic sciences, in particular when buried human remains strongly decomposed or skeletonized are found in different environment situations. Among the different techniques normally used in geopedology, it is usefull to apply in such forensic cases, soil micromorphology (including optical microscopy and ultramicroscopy) that has been underused up today, for various kind of reasons. An interdisciplinary Italian-team, formed by earth scientists and legal medicine, is working on several sets of experimental burial of pigs and piglets in different soil types and for different times of burial, in order to get new evidences on environmental behaviour related to the burial, focalising on geopedological and micropedological aspects. The present work is focused on: - ultramicroscopic (SEM-EDS) characterization of the phosphatic impregnation (by body fluids) on soils sampled under the dead bodies of five couples of pigs, buried respectively for one month, six month, one year, two years and two years and half in two different areas; - microscopic (petrographic microscope) and ultramicroscopic (SEM-EDS) cross characterization of the phosphatic impregnation (by body fluids) on soils sampled under the dead bodies of several piglets, buried for twenty months. The first results show trends of persistency of such phosphatic features, mainly related to the grain size of the impregnated soil particles and weather conditions (or seasons) of exhumation, while apparently time since burial is only marginally effective for the investigated burial period. Further experiments are in progress in order to clarify the pathways of phosphorus precipitation and leaching for longer times of burial and different seasons of exhumation, both from the microscopic and the pedological/chemical point of view.

Soil nematode communities are ecologically more mature beneath late- than early-successional stage biological soil crusts

USGS Publications Warehouse

Darby, B.J.; Neher, D.A.; Belnap, J.

2007-01-01

Biological soil crusts are key mediators of carbon and nitrogen inputs for arid land soils and often represent a dominant portion of the soil surface cover in arid lands. Free-living soil nematode communities reflect their environment and have been used as biological indicators of soil condition. In this study, we test the hypothesis that nematode communities are successionally more mature beneath well-developed, late-successional stage crusts than immature, early-successional stage crusts. We identified and enumerated nematodes by genus from beneath early- and late-stage crusts from both the Colorado Plateau, Utah (cool, winter rain desert) and Chihuahuan Desert, New Mexico (hot, summer rain desert) at 0-10 and 10-30 cm depths. As hypothesized, nematode abundance, richness, diversity, and successional maturity were greater beneath well-developed crusts than immature crusts. The mechanism of this aboveground-belowground link between biological soil crusts and nematode community composition is likely the increased food, habitat, nutrient inputs, moisture retention, and/or environmental stability provided by late-successional crusts. Canonical correspondence analysis of nematode genera demonstrated that nematode community composition differed greatly between geographic locations that contrast in temperature, precipitation, and soil texture. We found unique assemblages of genera among combinations of location and crust type that reveal a gap in scientific knowledge regarding empirically derived characterization of dominant nematode genera in deserts soils and their functional role in a crust-associated food web. ?? 2006 Elsevier B.V. All rights reserved.

Medusahead: Available soil N and microbial communities in native and invasive soils

Treesearch

Robert R. Blank; Rene Sforza; Tye Morgan

2008-01-01

To better understand why medusahead (Taeniatherum caput-medusae) is invasive, we quantified soil N availability and characterized soil microbial communities between native and invasive populations. No consistent differences in soil N mineralization potentials were noted between native medusahead sites in Spain, Turkey, France, and Greece and two...

A Lipid Extraction and Analysis Method for Characterizing Soil Microbes in Experiments with Many Samples

PubMed Central

Oates, Lawrence G.; Read, Harry W.; Gutknecht, Jessica L. M.; Duncan, David S.; Balser, Teri B.; Jackson, Randall D.

2017-01-01

Microbial communities are important drivers and regulators of ecosystem processes. To understand how management of ecosystems may affect microbial communities, a relatively precise but effort-intensive technique to assay microbial community composition is phospholipid fatty acid (PLFA) analysis. PLFA was developed to analyze phospholipid biomarkers, which can be used as indicators of microbial biomass and the composition of broad functional groups of fungi and bacteria. It has commonly been used to compare soils under alternative plant communities, ecology, and management regimes. The PLFA method has been shown to be sensitive to detecting shifts in microbial community composition. An alternative method, fatty acid methyl ester extraction and analysis (MIDI-FA) was developed for rapid extraction of total lipids, without separation of the phospholipid fraction, from pure cultures as a microbial identification technique. This method is rapid but is less suited for soil samples because it lacks an initial step separating soil particles and begins instead with a saponification reaction that likely produces artifacts from the background organic matter in the soil. This article describes a method that increases throughput while balancing effort and accuracy for extraction of lipids from the cell membranes of microorganisms for use in characterizing both total lipids and the relative abundance of indicator lipids to determine soil microbial community structure in studies with many samples. The method combines the accuracy achieved through PLFA profiling by extracting and concentrating soil lipids as a first step, and a reduction in effort by saponifying the organic material extracted and processing with the MIDI-FA method as a second step. PMID:28745639

RESOLVE Projects: Lunar Water Resource Demonstration and Regolith Volatile Characterization

NASA Technical Reports Server (NTRS)

2008-01-01

To sustain affordable human and robotic space exploration, the ability to live off the land at the exploration site will be essential. NASA calls this ability in situ resource utilization (ISRU) and is focusing on finding ways to sustain missions first on the Moon and then on Mars. The ISRU project aims to develop capabilities to technology readiness level 6 for the Robotic Lunar Exploration Program and early human missions returning to the Moon. NASA is concentrating on three primary areas of ISRU: (1) excavating, handling, and moving lunar regolith, (2) extracting oxygen from lunar regolith, and (3) finding, characterizing, extracting, separating, and storing volatile lunar resources, especially in the permanently shadowed polar craters. To meet the challenges related to technology development for these three primary focus areas, the Regolith and Environment Science and Oxygen and Lunar Volatile Extraction (RESOLVE) project was initiated in February 2005, through funding by the Exploration Systems Mission Directorate. RESOLVE's objectives are to develop requirements and conceptual designs and to perform breadboard concept verification testing of each experiment module. The final goal is to deliver a flight prototype unit that has been tested in a relevant lunar polar environment. Here we report progress toward the third primary area creating ways to find, characterize, extract, separate, and store volatile lunar resources. The tasks include studying thermal, chemical, and electrical ways to collect such volatile resources as hydrogen, water, nitrogen, methane, and ammonia. We approached this effort through two subtasks: lunar water resource demonstration (LWRD) and regolith volatile characterization (RVC).

The Biotoxicity of Mars Soils

NASA Technical Reports Server (NTRS)

Kerney, Krystal

2010-01-01

Recent evidence from the Opportunity and Spirit rovers suggests that the soils on Mars might be very high in biotoxic materials induding sulfate salts, chlorides, and acidifying agents. Yet, very little is known about how the chemistries of Mars soils might affect the survival and growth of terrestrial microorganisms. The primary objectives of the proposed research will be to: (1) prepare and characterize Mars analog soils amended with potential biotoxic levels of sulfates, chlorides, and acidifying minerals; (2) use the stimulants to conduct a series of toxicology assays to determine if terrestrial microorganisms from spacecraft or extreme environments can survive direct exposure to the biotoxic soils, and (3) mix soils from extreme environments on Earth into Mars analog soils to determine if terrestrial microorganisms can grow and replicate under Martian conditions. The Mars analog soils will be thoroughly characterized by a wide diversity of soil chemistry assays to determine the exact nature of the soluble biotoxic components following hydration. The microbial experiments will be designed to test the effects of Mars stimulants on microbial survival, growth and replication during direct challenge experiments. Toxicology experiments will be designed to mimic terrestrial microbes coming into contact with biotoxic soils with and without liquid water. Results are expected to help" ... characterize the limits of life in ... planetary environments ... " and may help constrain the search for life on Mars.

Climate, soil texture, and soil types affect the contributions of fine-fraction-stabilized carbon to total soil organic carbon in different land uses across China.

PubMed

Cai, Andong; Feng, Wenting; Zhang, Wenju; Xu, Minggang

2016-05-01

Mineral-associated organic carbon (MOC), that is stabilized by fine soil particles (i.e., silt plus clay, <53 μm), is important for soil organic carbon (SOC) persistence and sequestration, due to its large contribution to total SOC (TSOC) and long turnover time. Our objectives were to investigate how climate, soil type, soil texture, and agricultural managements affect MOC contributions to TSOC in China. We created a dataset from 103 published papers, including 1106 data points pairing MOC and TSOC across three major land use types: cropland, grassland, and forest. Overall, the MOC/TSOC ratio ranged from 0.27 to 0.80 and varied significantly among soil groups in cropland, grassland, and forest. Croplands and forest exhibited significantly higher median MOC/TSOC ratios than in grassland. Moreover, forest and grassland soils in temperate regions had higher MOC/TSOC ratios than in subtropical regions. Furthermore, the MOC/TSOC ratio was much higher in ultisol, compared with the other soil types. Both the MOC content and MOC/TSOC ratio were positively correlated with the amount of fine fraction (silt plus clay) in soil, highlighting the importance of soil texture in stabilizing organic carbon across various climate zones. In cropland, different fertilization practices and land uses (e.g., upland, paddy, and upland-paddy rotation) significantly altered MOC/TSOC ratios, but not in cropping systems (e.g., mono- and double-cropping) characterized by climatic differences. This study demonstrates that the MOC/TSOC ratio is mainly driven by soil texture, soil types, and related climate and land uses, and thus the variations in MOC/TSOC ratios should be taken into account when quantitatively estimating soil C sequestration potential of silt plus clay particles on a large scale. Copyright © 2016 Elsevier Ltd. All rights reserved.

Characterization of soil fauna under the influence of mercury atmospheric deposition in Atlantic Forest, Rio de Janeiro, Brazil.

PubMed

Buch, Andressa Cristhy; Correia, Maria Elizabeth Fernandes; Teixeira, Daniel Cabral; Silva-Filho, Emmanoel Vieira

2015-06-01

The increasing levels of mercury (Hg) found in the atmosphere arising from anthropogenic sources, have been the object of great concern in the past two decades in industrialized countries. Brazil is the seventh country with the highest rate of mercury in the atmosphere. The major input of Hg to ecosystems is through atmospheric deposition (wet and dry), being transported in the atmosphere over large distances. The forest biomes are of strong importance in the atmosphere/soil cycling of elemental Hg through foliar uptake and subsequent transference to the soil through litter, playing an important role as sink of this element. Soil microarthropods are keys to understanding the soil ecosystem, and for such purpose were characterized by the soil fauna of two Units of Forest Conservation of the state of the Rio de Janeiro, inwhich one of the areas suffer quite interference from petrochemicals and industrial anthropogenic activities and other area almost exempts of these perturbations. The results showed that soil and litter of the Atlantic Forest in Brazil tend to stock high mercury concentrations, which could affect the abundance and richness of soil fauna, endangering its biodiversity and thereby the functioning of ecosystems. Copyright © 2015. Published by Elsevier B.V.

EVALUATION OF SOLIDIFICATION/STABILIZATION AS A BEST DEMONSTRATED AVAILABLE TECHNOLOGY FOR CONTAMINATED SOILS

EPA Science Inventory

This project involved the evaluation of solidification/stabilization technology as a BDAT for contaminated soil. Three binding agents were used on four different synthetically contaminated soils. Performance evaluation data included unconfined compressive strength (UCS) and the T...

Advanced solvent based methods for molecular characterization of soil organic matter by high-resolution mass spectrometry

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tfaily, Malak M.; Chu, Rosalie K.; Tolic, Nikola

2015-05-19

Soil organic matter (SOM) a complex, heterogeneous mixture of above and belowground plant litter and animal and microbial residues at various degrees of decomposition, is a key reservoir for carbon (C) and nutrient biogeochemical cycling in soil based ecosystems. A limited understanding of the molecular composition of SOM limits the ability to routinely decipher chemical processes within soil and predict accurately how terrestrial carbon fluxes will response to changing climatic conditions and land use. To elucidate the molecular-level structure of SOM, we selectively extracted a broad range of intact SOM compounds by a combination of different organic solvents from soilsmore » with a wide range of C content. Our use of Electrospray ionization (ESI) coupled with Fourier transform ion cyclotron resonance mass spectrometry (FTICR MS) and a suite of solvents with varying polarity significantly expands the inventory of the types of organic molecules present in soils. Specifically, we found that hexane is selective for lipid-like compounds with very low O:C ratios; water was selective for carbohydrates with high O:C ratios; acetonitrile preferentially extracts lignin, condensed structures, and tannin poly phenolic compounds with O:C > 0.5; methanol has higher selectivity towards compounds characterized with low O:C < 0.5; and hexane, MeOH, ACN and water solvents increase the number and types of organic molecules extracted from soil for a broader range of chemically diverse soil types. Our study of SOM molecules by ESI-FTICR MS revealed new insight into the molecular-level complexity of organics contained in soils.« less

Contribution of soil fauna to soil functioning in degraded environments: a multidisciplinary approach

NASA Astrophysics Data System (ADS)

Gargiulo, Laura; Mele, Giacomo; Moradi, Jabbar; Kukla, Jaroslav; Jandová, Kateřina; Frouz, Jan

2016-04-01

The restoration of the soil functions is essential for the recovery of highly degraded sites and, consequently, the study of the soil fauna role in the soil development in such environments has great potential from a practical point of view. The soils of the post-mining sites represent unique models for the study of the natural ecological succession because mining creates similar environments characterized by the same substrate, but by different ages according to the year of closure of mines. The aim of this work was to assess the contribution of different species of macrofauna on the evolution of soil structure and on the composition and activity of the microbial community in soil samples subjected to ecological restoration or characterized by spontaneous ecological succession. For this purpose, an experimental test was carried out in two sites characterized by different post-mining conditions: 1) natural succession, 2) reclamation with planting trees. These sites are located in the post-mining area of Sokolov (Czech Republic). For the experimental test repacked soil cores were prepared in laboratory with sieved soil sampled from the two sites. The soil cores were prepared maintaining the sequence of soil horizons present in the field. These samples were inoculated separately with two genera of earthworms (Lumbricus and Aporrectodea) and two of centipedes (Julida and Polydesmus). In particular, based on their body size, were inoculated for each cylinder 2 individuals of millipedes, 1 individual of Lumbricus and 4 individuals of Aporrectodea. For each treatment and for control samples 5 replicates were prepared and all samples were incubated in field for 1 month in the two original sampling sites. After the incubation the samples were removed from the field and transported in laboratory in order to perform the analysis of microbial respiration, of PLFA (phospholipid-derived fatty acids) and ergosterol contents and finally for the characterization of soil structure

Numerical and Experimental Investigation of Soil Heterogeneity around Landmines in Natural Soil

NASA Astrophysics Data System (ADS)

Wallen, B.; Smits, K. M.; Howington, S. E.

2015-12-01

The environment in which landmines are placed is oftentimes highly heterogeneous. These heterogeneities such as differences in soil type, packing and moisture, combined with changes in surface and climate conditions can oftentimes mask the presence of the mine. Understanding the impact of heterogeneity on heat and mass transfer behavior in the vicinity of landmines is paramount to properly identifying landmine locations for demining operations. This study investigates the impact of soil heterogeneity on soil moisture and temperature distributions around buried objects with the goal of increasing our ability to model and predict the environmental conditions that are most dynamic to mine detection performance. A ten-day field experiment was conducted in which two anti-personnel landmines at different depths and a limestone block of comparable size were buried. The site was instrumented with a series of sensors, monitoring atmospheric, surface and subsurface conditions to include measurements of soil moisture, soil and air temperature, relative humidity, vapor concentration, and meteorological conditions such as wind speed and net radiation. Infrared thermal imaging was used to provide continuous profiles of surface temperature conditions. The soil was well characterized in the laboratory to provide good understanding of field conditions for numerical modeling efforts. Experimental results demonstrate the strongest thermal contrast between shallow landmine emplacement and the surrounding soil occurring as the sun approaches its zenith and two hours after sunset until the sun directly impacts the soil above the landmine. A finite-element model of fluid flow and heat transport through porous media is compared against experimental observations, capturing the diurnal variation. A validated model, like this one, offers the opportunity to improve landmine detection probabilities and reduce false alarms caused by environmental variability.

Effects of different mechanized soil fertilization methods on corn soil fertility under continuous cropping

NASA Astrophysics Data System (ADS)

Shi, Qingwen; Wang, Huixin; Bai, Chunming; Wu, Di; Song, Qiaobo; Gao, Depeng; Dong, Zengqi; Cheng, Xin; Dong, Qiping; Zhang, Yahao; Mu, Jiahui; Chen, Qinghong; Liao, Wenqing; Qu, Tianru; Zhang, Chunling; Zhang, Xinyu; Liu, Yifei; Han, Xiaori

2017-05-01

Experiments for mechanized soil fertilization for corns were conducted in Faku demonstration zone. On this basis, we studied effects on corn soil fertility under continuous cropping due to different mechanized soil fertilization methods. Our study would serve as a theoretical basis further for mechanized soil fertilization improvement and soil quality improvement in brown soil area. Based on the survey of soil physical characteristics during different corn growth periods, we collected soil samples from different corn growth periods to determine and make statistical analysis accordingly. Stalk returning to field with deep tillage proved to be the most effective on available nutrient improvement for arable soil in the demonstration zone. Different mechanized soil fertilization methods were remarkably effective on total phosphorus improvement for arable soil in the demonstration zone, while less effective on total nitrogen or total potassium, and not so effective on C/N ratio in soil. Stalk returning with deep tillage was more favorable to improve content of organic matter in soil, when compared with surface application, and organic granular fertilizer more favorable when compared with decomposed cow dung for such a purpose, too.

DEMONSTRATION AND QUALITY ASSURANCE PROJECT PLAN TECHNOLOGIES FOR THE MONITORING AND MEASUREMENT OF DIOXIN AND DIOXIN-LIKE COMPOUNDS IN SOIL AND SEDIMENT

EPA Science Inventory

The demonstration of technologies for determining the presence of dioxin in soil and sediment is being conducted under the U.S. Environmental Protection Agency Superfund Innovative Technology Evaluation Program in Saginaw, Michigan, at Green Point Environmental Learning Center fr...

PRELIMINARY ASSESSMENT OF WORKER AND AMBIENT AIR EXPOSURES DURING SOIL REMEDIATION TECHNOLOGY DEMONSTRATIONS

EPA Science Inventory

Hazardous waste site remediation workers or neighboring residents may be exposed to particulates during the remediation of lead contaminated soil sites. An industrial hygiene survey and air monitoring program for both lead and dust were performed during initial soil sampling acti...

Characterization of Growing Soil Bacterial Communities across a pH gradient Using H218O DNA-Stable Isotope Probing

NASA Astrophysics Data System (ADS)

Welty-Bernard, A. T.; Schwartz, E.

2014-12-01

Recent studies have established consistent relationships between pH and bacterial diversity and community structure in soils from site-specific to landscape scales. However, these studies rely on DNA or PLFA extraction techniques from bulk soils that encompass metabolically active and inactive, or dormant, communities, and loose DNA. Dormant cells may comprise up to 80% of total live cells. If dormant cells dominate a particular environment, it is possible that previous interpretations of the soil variables assumed to drive communities could be profoundly affected. We used H218O stable isotope probing and bar-coded illumina sequencing of 16S rRNA genes to monitor the response of actively growing communities to changes in soil pH in a soil microcosm over 14 days. This substrate-independent approach has several advantages over 13C or 15N-labelled molecules in that all growing bacteria should be able to make use of water, allowing characterization of whole communities. We hypothesized that Acidobacteria would increasingly dominate the growing community and that Actinobacteria and Bacteroidetes would decline, given previously established responses by these taxa to soil pH. Instead, we observed the reverse. Actinobacteria abundance increased three-fold from 26 to 76% of the overall community as soil pH fell from pH 5.6 to pH 4.6. Shifts in community structure and decreases in diversity with declining soil pH were essentially driven by two families, Streptomyceaca and Microbacteracea, which collectively increased from 2 to 40% of the entire community. In contrast, Acidobacteria as a whole declined although numbers of subdivision 1 remained stable across all soil pH levels. We suggest that the brief incubation period in this SIP study selected for growth of acid-tolerant Actinobacteria over Acidobacteria. Taxa within Actinomycetales have been readily cultured over short time frames, suggesting rapid growth patterns. Conversely, taxa within Acidobacteria have been

Soil and geomorphological parameters to characterize natural environmental and human induced changes within the Guadarrama Range (Central Spain)

NASA Astrophysics Data System (ADS)

Schmid, Thomas; Inclán-Cuartas, Rosa M.; Santolaria-Canales, Edmundo; Saa, Antonio; Rodríguez-Rastrero, Manuel; Tanarro-Garcia, Luis M.; Luque, Esperanza; Pelayo, Marta; Ubeda, Jose; Tarquis, Ana; Diaz-Puente, Javier; De Marcos, Javier; Rodriguez-Alonso, Javier; Hernandez, Carlos; Palacios, David; Gallardo-Díaz, Juan; Fidel González-Rouco, J.

2016-04-01

Mediterranean mountain ecosystems are often complex and remarkably diverse and are seen as important sources of biological diversity. They play a key role in the water and sediment cycle for lowland regions as well as preventing and mitigating natural hazards especially those related to drought such as fire risk. However, these ecosystems are fragile and vulnerable to changes due to their particular and extreme climatic and biogeographic conditions. Some of the main pressures on mountain biodiversity are caused by changes in land use practices, infrastructure and urban development, unsustainable tourism, overexploitation of natural resources, fragmentation of habitats, particularly when located close to large population centers, as well as by pressures related toclimate change. The objective of this work is to select soil and geomorphological parameters in order to characterize natural environmental and human induced changes within the newly created National Park of the Sierra de Guadarrama in Central Spain, where the presence of the Madrid metropolitan area is the main factor of impact. This is carried out within the framework of the Guadarrama Monitoring Network (GuMNet) of the Campus de ExcelenciaInternacionalMoncloa, where long-term monitoring of the atmosphere, soil and bedrock are priority. This network has a total of ten stations located to the NW of Madrid and in this case, three stations have been selected to represent different ecosystems that include: 1) an alluvial plain in a lowland pasture area (La Herreria at 920 m a.s.l.), 2) mid mountain pine-forested and pasture area (Raso del Pino at 1801 m a.s.l.) and 3) high mountain grassland and rock area (Dos Hermanas at 2225 m a.s.l.). At each station a site geomorphological description, soil profile description and sampling was carried out. In the high mountain area information was obtained for monitoring frost heave activity and downslope soil movement. Basic soil laboratory analyses have been carried out

Development of soft extraction method for structural characterization of boreal forest soil proteins with MALDI-TOF/MS

NASA Astrophysics Data System (ADS)

Kanerva, Sanna; Ketola, Raimo A.; Kitunen, Veikko; Smolander, Aino; Kotiaho, Tapio

2010-05-01

Nitrogen (N) is usually the nutrient restricting productivity in boreal forests. Forest soils contain a great amount of nitrogen, but only a small part of it is in mineral form. Most part of soil N is bound in the structures of different organic compounds such as proteins, peptides, amino acids and more stabilized, refractory compounds. Due to the fact that soil organic N has a very important role in soil nutrient cycling and in plant nutrition, there is a need for more detailed knowledge of its chemistry in soil. Conventional methods to extract and analyze soil organic N are usually very destructive for structures of higher molecular weight organic compounds, such as proteins. The aim of this study was to characterize proteins extracted from boreal forest soil by "soft" extraction methods in order to maintain their molecular structure. The organic layer (F) from birch forest floor containing 78% of organic matter was sieved, freeze dried, pulverized, and extracted with a citrate or phosphate buffer (pH 6 or 8). Sequential extraction with the citrate or phosphate buffer and an SDS buffer (pH 6.8), slightly modified from the method of Chen et al. (2009, Proteomics 9: 4970-4973), was also done. Proteins were purified from the soil extract by extraction with buffered phenol and precipitated with methanol + 0.1M ammonium acetate at -20°C. Characterization of proteins was performed with matrix assisted laser desorption ionization - time-of-flight mass spectrometry (MALDI-TOF/MS) and the concentration of total proteins was measured using Bradford's method. Bovine serum albumin (BSA) was used as a positive control in the extractions and as a standard protein in Bradford's method. Our results showed that sequential extraction increased the amount of extracted proteins compared to the extractions without the SDS-buffer; however, it must be noted that the use of SDS-buffer very probably increased denaturization of proteins. Purification of proteins from crude soil extracts

The History of Electromagnetic Induction Techniques in Soil Survey

NASA Astrophysics Data System (ADS)

Brevik, Eric C.; Doolittle, Jim

2014-05-01

Electromagnetic induction (EMI) has been used to characterize the spatial variability of soil properties since the late 1970s. Initially used to assess soil salinity, the use of EMI in soil studies has expanded to include: mapping soil types; characterizing soil water content and flow patterns; assessing variations in soil texture, compaction, organic matter content, and pH; and determining the depth to subsurface horizons, stratigraphic layers or bedrock, among other uses. In all cases the soil property being investigated must influence soil apparent electrical conductivity (ECa) either directly or indirectly for EMI techniques to be effective. An increasing number and diversity of EMI sensors have been developed in response to users' needs and the availability of allied technologies, which have greatly improved the functionality of these tools. EMI investigations provide several benefits for soil studies. The large amount of georeferenced data that can be rapidly and inexpensively collected with EMI provides more complete characterization of the spatial variations in soil properties than traditional sampling techniques. In addition, compared to traditional soil survey methods, EMI can more effectively characterize diffuse soil boundaries and identify included areas of dissimilar soils within mapped soil units, giving soil scientists greater confidence when collecting spatial soil information. EMI techniques do have limitations; results are site-specific and can vary depending on the complex interactions among multiple and variable soil properties. Despite this, EMI techniques are increasingly being used to investigate the spatial variability of soil properties at field and landscape scales.

A long-term field experiment of soil transplantation demonstrating the role of contemporary geographic separation in shaping soil microbial community structure

PubMed Central

Sun, Bo; Wang, Feng; Jiang, Yuji; Li, Yun; Dong, Zhixin; Li, Zhongpei; Zhang, Xue-Xian

2014-01-01

The spatial patterns of microbial communities are largely determined by the combined effects of historical contingencies and contemporary environmental disturbances, but their relative importance remains poorly understood. Empirical biogeographic data currently available are mostly based on the traditional method of observational survey, which typically involves comparing indigenous microbial communities across spatial scales. Here, we report a long-term soil transplantation experiment, whereby the same two soils (red Acrisol and purple Cambisol from Yingtan) were placed into two geographic locations of ∼1000 km apart (i.e., Yingtan in the mid-subtropical region and Fengqiu in warm-temperate region; both located in China). Twenty years after the transplantation, the resulting soil microbial communities were subject to high-throughput 454 pyrosequencing analysis of 16S and 18S rRNA genes. Additionally, bacteria and archaea involved in nitrogen cycling were estimated using clone library analysis of four genes: archaeal amoA, bacterial amoA,nirK, and nifH. Data of subsequent phylogenetic analysis show that bacteria, fungi, and other microbial eukaryotes, as well as the nitrogen cycling genes, are grouped primarily by the factor of geographic location rather than soil type. Moreover, a shift of microbial communities toward those in local soil (i.e., Chao soil in Fengqiu) has been observed. The results thus suggest that the historical effects persistent in the soil microbial communities can be largely erased by contemporary disturbance within a short period of 20 years, implicating weak effects of historical contingencies on the structure and composition of microbial communities in the soil. PMID:24772284

Burkholderia cordobensis sp. nov., from agricultural soils.

PubMed

Draghi, Walter O; Peeters, Charlotte; Cnockaert, Margo; Snauwaert, Cindy; Wall, Luis G; Zorreguieta, Angeles; Vandamme, Peter

2014-06-01

Two Gram-negative, rod-shaped bacteria were isolated from agricultural soils in Córdoba province in central Argentina. Their 16S rRNA gene sequences demonstrated that they belong to the genus Burkholderia, with Burkholderia zhejiangensis as most closely related formally named species; this relationship was confirmed through comparative gyrB sequence analysis. Whole-cell fatty acid analysis supported their assignment to the genus Burkholderia. Burkholderia sp. strain YI23, for which a whole-genome sequence is available, represents the same taxon, as demonstrated by its highly similar 16S rRNA (100% similarity) and gyrB (99.1-99.7%) gene sequences. The results of DNA-DNA hybridization experiments and physiological and biochemical characterization further substantiated the genotypic and phenotypic distinctiveness of the Argentinian soil isolates, for which the name Burkholderia cordobensis sp. nov. is proposed, with strain MMP81(T) ( = LMG 27620(T) = CCUG 64368(T)) as the type strain. © 2014 IUMS.

Advanced solvent based methods for molecular characterization of soil organic matter by high-resolution mass spectrometry.

PubMed

Tfaily, Malak M; Chu, Rosalie K; Tolić, Nikola; Roscioli, Kristyn M; Anderton, Christopher R; Paša-Tolić, Ljiljana; Robinson, Errol W; Hess, Nancy J

2015-01-01

Soil organic matter (SOM), a complex, heterogeneous mixture of above and belowground plant litter and animal and microbial residues at various degrees of decomposition, is a key reservoir for carbon (C) and nutrient biogeochemical cycling in soil based ecosystems. A limited understanding of the molecular composition of SOM limits the ability to routinely decipher chemical processes within soil and accurately predict how terrestrial carbon fluxes will respond to changing climatic conditions and land use. To elucidate the molecular-level structure of SOM, we selectively extracted a broad range of intact SOM compounds by a combination of different organic solvents from soils with a wide range of C content. Our use of electrospray ionization (ESI) coupled with Fourier transform ion cyclotron resonance mass spectrometry (FTICR MS) and a suite of solvents with varying polarity significantly expands the inventory of the types of organic molecules present in soils. Specifically, we found that hexane is selective for lipid-like compounds with very low O/C ratios (<0.1); water (H2O) was selective for carbohydrates with high O/C ratios; acetonitrile (ACN) preferentially extracts lignin, condensed structures, and tannin polyphenolic compounds with O/C > 0.5; methanol (MeOH) has higher selectivity toward compounds characterized with low O/C < 0.5; and hexane, MeOH, ACN, and H2O solvents increase the number and types of organic molecules extracted from soil for a broader range of chemically diverse soil types. Our study of SOM molecules by ESI FTICR MS revealed new insight into the molecular-level complexity of organics contained in soils. We present the first comparative study of the molecular composition of SOM from different ecosystems using ultra high-resolution mass spectrometry.

Preparation, Characterization, and UV Irradiation of Mars Soil Analogues Under Simulated Martian Conditions to Support Detection of Molecular Biomarkers

NASA Astrophysics Data System (ADS)

Fornaro, T.; Brucato, J. R.; ten Kate, I. L.; Siljeström, S.; Steele, A.; Cody, G. D.; Hazen, R. M.

2018-04-01

We present laboratory activities of preparation, characterization, and UV irradiation processing of Mars soil analogues, which are key to support both in situ exploration and sample return missions devoted to detection of molecular biomarkers on Mars.

Demonstration of the MPV at a Residential Area in Puako, Hawaii: UXO Characterization in Challenging Survey Environments Using the MPV

DTIC Science & Technology

2017-03-01

DEMONSTRATION REPORT Demonstration of the MPV at a Residential Area in Puako, Hawaii: UXO Characterization in Challenging Survey ...DATES COVERED (From - To) 09/2012-04/2017 4. TITLE AND SUBTITLE UXO Characterization in Challenging Survey Environments Using the MPV 5a. CONTRACT...19 5.4.1 Detection survey ..................................................................................................... 19 5.4.2 Cued

Manipulative experiments demonstrate how long-term soil moisture changes alter controls of plant water use

DOE Office of Scientific and Technical Information (OSTI.GOV)

Grossiord, Charlotte; Sevanto, Sanna Annika; Limousin, Jean -Marc

Tree transpiration depends on biotic and abiotic factors that might change in the future, including precipitation and soil moisture status. Although short-term sap flux responses to soil moisture and evaporative demand have been the subject of attention before, the relative sensitivity of sap flux to these two factors under long-term changes in soil moisture conditions has rarely been determined experimentally. We tested how long-term artificial change in soil moisture affects the sensitivity of tree-level sap flux to daily atmospheric vapor pressure deficit ( VPD) and soil moisture variations, and the generality of these effects across forest types and environments usingmore » four manipulative sites in mature forests. Exposure to relatively long-term (two to six years) soil moisture reduction decreases tree sap flux sensitivity to daily VPD and relative extractable water ( REW) variations, leading to lower sap flux even under high soil moisture and optimal VPD. Inversely, trees subjected to long-term irrigation showed a significant increase in their sensitivity to daily VPD and REW, but only at the most water-limited site. The ratio between the relative change in soil moisture manipulation and the relative change in sap flux sensitivity to VPD and REW variations was similar across sites suggesting common adjustment mechanisms to long-term soil moisture status across environments for evergreen tree species. Altogether, our results show that long-term changes in soil water availability, and subsequent adjustments to these novel conditions, could play a critical and increasingly important role in controlling forest water use in the future.« less

Manipulative experiments demonstrate how long-term soil moisture changes alter controls of plant water use

DOE PAGES

Grossiord, Charlotte; Sevanto, Sanna Annika; Limousin, Jean -Marc; ...

2017-12-14

Tree transpiration depends on biotic and abiotic factors that might change in the future, including precipitation and soil moisture status. Although short-term sap flux responses to soil moisture and evaporative demand have been the subject of attention before, the relative sensitivity of sap flux to these two factors under long-term changes in soil moisture conditions has rarely been determined experimentally. We tested how long-term artificial change in soil moisture affects the sensitivity of tree-level sap flux to daily atmospheric vapor pressure deficit ( VPD) and soil moisture variations, and the generality of these effects across forest types and environments usingmore » four manipulative sites in mature forests. Exposure to relatively long-term (two to six years) soil moisture reduction decreases tree sap flux sensitivity to daily VPD and relative extractable water ( REW) variations, leading to lower sap flux even under high soil moisture and optimal VPD. Inversely, trees subjected to long-term irrigation showed a significant increase in their sensitivity to daily VPD and REW, but only at the most water-limited site. The ratio between the relative change in soil moisture manipulation and the relative change in sap flux sensitivity to VPD and REW variations was similar across sites suggesting common adjustment mechanisms to long-term soil moisture status across environments for evergreen tree species. Altogether, our results show that long-term changes in soil water availability, and subsequent adjustments to these novel conditions, could play a critical and increasingly important role in controlling forest water use in the future.« less

Manipulative experiments demonstrate how long-term soil moisture changes alter controls of plant water use

DOE Office of Scientific and Technical Information (OSTI.GOV)

Grossiord, Charlotte; Sevanto, Sanna; Limousin, Jean-Marc

Tree transpiration depends on biotic and abiotic factors that might change in the future, including precipitation and soil moisture status. Although short-term sap flux responses to soil moisture and evaporative demand have been the subject of attention before, the relative sensitivity of sap flux to these two factors under long-term changes in soil moisture conditions has rarely been determined experimentally. We tested how long-term artificial change in soil moisture affects the sensitivity of tree-level sap flux to daily atmospheric vapor pressure deficit (VPD) and soil moisture variations, and the generality of these effects across forest types and environments using fourmore » manipulative sites in mature forests. Exposure to relatively long-term (two to six years) soil moisture reduction decreases tree sap flux sensitivity to daily VPD and relative extractable water (REW) variations, leading to lower sap flux even under high soil moisture and optimal VPD. Inversely, trees subjected to long-term irrigation showed a significant increase in their sensitivity to daily VPD and REW, but only at the most water-limited site. The ratio between the relative change in soil moisture manipulation and the relative change in sap flux sensitivity to VPD and REW variations was similar across sites suggesting common adjustment mechanisms to long-term soil moisture status across environments for evergreen tree species. Overall, our results show that long-term changes in soil water availability, and subsequent adjustments to these novel conditions, could play a critical and increasingly important role in controlling forest water use in the future.« less

Microbial community controls on decomposition and soil carbon storage

NASA Astrophysics Data System (ADS)

Frey, S. D.

2016-12-01

Soil is one of the most diverse habitats on Earth and one of the least characterized in terms of the identification and ecological roles of soil organisms. Soils also contain the largest repository of organic C in the terrestrial biosphere and the activities of heterotrophic soil organisms are responsible for one of the largest annual fluxes of CO2 to the atmosphere. A fundamental controversy in ecosystem ecology is the degree to which identification of microbial taxa informs our ability to understand and model ecosystem-scale processes, such as soil carbon storage and fluxes. We have evidence that microbial identity does matter, particularly in a global change context where soil microorganisms experience selective pressures to adapt to changing environments. In particular, our work at the Harvard Forest Long-term Ecological Research (LTER) site demonstrates that the microbial community is fundamentally altered by global change stressors (climate warming, nitrogen deposition, biotic invasion) and that microbial taxa exposed to long-term environmental change exhibit an altered capacity to decompose organic matter. This talk will discuss the relative importance of changes in microbial community structure versus microbial physiology for soil organic matter degradation and stabilization.

Multisubstrate Isotope Labeling and Metagenomic Analysis of Active Soil Bacterial Communities

PubMed Central

Verastegui, Y.; Cheng, J.; Engel, K.; Kolczynski, D.; Mortimer, S.; Lavigne, J.; Montalibet, J.; Romantsov, T.; Hall, M.; McConkey, B. J.; Rose, D. R.; Tomashek, J. J.; Scott, B. R.

2014-01-01

ABSTRACT Soil microbial diversity represents the largest global reservoir of novel microorganisms and enzymes. In this study, we coupled functional metagenomics and DNA stable-isotope probing (DNA-SIP) using multiple plant-derived carbon substrates and diverse soils to characterize active soil bacterial communities and their glycoside hydrolase genes, which have value for industrial applications. We incubated samples from three disparate Canadian soils (tundra, temperate rainforest, and agricultural) with five native carbon (12C) or stable-isotope-labeled (13C) carbohydrates (glucose, cellobiose, xylose, arabinose, and cellulose). Indicator species analysis revealed high specificity and fidelity for many uncultured and unclassified bacterial taxa in the heavy DNA for all soils and substrates. Among characterized taxa, Actinomycetales (Salinibacterium), Rhizobiales (Devosia), Rhodospirillales (Telmatospirillum), and Caulobacterales (Phenylobacterium and Asticcacaulis) were bacterial indicator species for the heavy substrates and soils tested. Both Actinomycetales and Caulobacterales (Phenylobacterium) were associated with metabolism of cellulose, and Alphaproteobacteria were associated with the metabolism of arabinose; members of the order Rhizobiales were strongly associated with the metabolism of xylose. Annotated metagenomic data suggested diverse glycoside hydrolase gene representation within the pooled heavy DNA. By screening 2,876 cloned fragments derived from the 13C-labeled DNA isolated from soils incubated with cellulose, we demonstrate the power of combining DNA-SIP, multiple-displacement amplification (MDA), and functional metagenomics by efficiently isolating multiple clones with activity on carboxymethyl cellulose and fluorogenic proxy substrates for carbohydrate-active enzymes. PMID:25028422

Infiltration Variability in Agricultural Soil Aggregates Caused by Air Slaking

NASA Astrophysics Data System (ADS)

Korenkova, L.; Urik, M.

2018-04-01

This article reports on variation in infiltration rates of soil aggregates as a result of phenomenon known as air slaking. Air slaking is caused by the compression and subsequent escape of air captured inside soil aggregates during water saturation. Although it has been generally assumed that it occurs mostly when dry aggregates are rapidly wetted, the measurements used for this paper have proved that it takes place even if the wetting is gradual, not just immediate. It is a phenomenon that contributes to an infiltration variability of soils. In measuring the course of water flow through the soil, several small aggregates of five agricultural soils were exposed to distilled water at zero tension in order to characterize their hydraulic properties. Infiltration curves obtained for these aggregates demonstrate the effect of entrapped air on the increase and decrease of infiltration rates. The measurements were performed under various moisture conditions of the A-horizon aggregates using a simple device.

Characterization of tillage effects on soil permeability using different measures of macroporosity derived from tension infiltrometry

NASA Astrophysics Data System (ADS)

Bodner, G.; Schwen, A.; Scholl, P.; Kammerer, G.; Buchan, G.; Kaul, H.-P.; Loiskandl, W.

2010-05-01

approaches (direct vs. inverse evaluation, capillary vs. flow weighted pore radius). We will show the influence of the distinct evaluation procedures on the resulting effective macroporosity, as well as on the relationships between macropore radius and hydraulic conductivity (Moret and Arrúe, 2007) and pore fraction respectively (Carey et al., 2007). The infiltration measurements used in this study were obtained in a long-term tillage trial located in the semi-arid region of Eastern Austria. Measurements were taken five times over the vegetation period, starting immediately after tillage until harvest of the winter wheat crop. Three tillage systems were evaluated, being conventional tillage with plough, minimum tillage with chisel and no-tillage. Additional to infiltration measurements, also soil water content was monitored continuously by a capacitance probe in all three replicates of each tillage treatment in 10, 20 and 40 cm soil depth. Water content time series are used to derive flow velocity in the wet range by cross-correlation analysis (Wu et al., 1997). This effective parameter of water transmission will then be compared to the flow behaviour expected from the characterization of soil macroporosity. We will show that mainly in no-tillage systems large macropores contribute essentially to flow and therefore the decision on pore measure and evaluation procedure to be used leads to substantial differences. For a detailed comparison of tillage effects on soil hydraulic properties it is therefore essential to analyse the contribution of different tension infiltrometry based evaluation methods to explain effective water transmission through the complex porous network of the soil. References Carey, S.K., Quinton, W.L., Goeller, N.T. 2007. Field and laboratory estimates of pore size properties and hydraulic characteristics for subarctic organic soils. Hydrol. Process. 21, 2560-2571. Moret, D., Arrúe, J.L. 2007. Characterizing soil water conducting macro- and mesoporosity

Characterization of carotenoids in soil bacteria and investigation of their photodegradation by UVA radiation via resonance Raman spectroscopy.

PubMed

Kumar B N, Vinay; Kampe, Bernd; Rösch, Petra; Popp, Jürgen

2015-07-07

A soil habitat consists of an enormous number of pigmented bacteria with the pigments mainly composed of diverse carotenoids. Most of the pigmented bacteria in the top layer of the soil are photoprotected from exposure to huge amounts of UVA radiation on a daily basis by these carotenoids. The photostability of these carotenoids depends heavily on the presence of specific features like a carbonyl group or an ionone ring system on its overall structure. Resonance Raman spectroscopy is one of the most sensitive and powerful techniques to detect and characterize these carotenoids and also monitor processes associated with them in their native system at a single cell resolution. However, most of the resonance Raman profiles of carotenoids have very minute differences, thereby making it extremely difficult to confirm if these differences are attributed to the presence of different carotenoids or if it is a consequence of their interaction with other cellular components. In this study, we devised a method to overcome this problem by monitoring also the photodegradation of the carotenoids in question by UVA radiation wherein a differential photodegradation response will confirm the presence of different carotenoids irrespective of the proximities in their resonance Raman profiles. Using this method, the detection and characterization of carotenoids in pure cultures of five species of pigmented coccoid soil bacteria is achieved. We also shed light on the influence of the structure of the carotenoid on its photodegradation which can be exploited for use in the characterization of carotenoids via resonance Raman spectroscopy.

Polybrominated diphenyl ethers (PBDEs) concentration in soil from San Luis Potosi, Mexico: levels and ecological and human health risk characterization.

PubMed

Pérez-Vázquez, Francisco J; Orta-García, Sandra T; Ochoa-Martínez, Ángeles C; Pruneda-Álvarez, Lucia G; Ruiz-Vera, Tania; Jiménez-Avalos, Jorge Armando; González-Palomo, Ana K; Pérez-Maldonado, Iván N

2016-01-01

The aim of this study was to assess the levels of polybrominated diphenyl ethers (PBDEs) in soils from the city of San Luis Potosi in Mexico and perform an ecological and human health risk characterization. In order to confirm the presence of PBDEs, outdoor surface soil samples were collected and the concentrations of PBDEs in urban, industrial, agricultural, and brick kiln industry areas were determined. The mean total PBDEs levels obtained in the study sites were 25.0 ± 39.5 μg/kg (geometric mean ± standard deviation) in the brick kiln industry zone; 34.5 ± 36.0 μg/kg in the urban zone; 8.00 ± 7.10 μg/kg in the industrial zone and 16.6 ± 15.3 μg/kg in the agricultural zone. The ecological and human health risk characterization showed relatively low-hazard quotient values. However, the moderately high PBDEs levels found in soils highlight the necessity to establish a systematic monitoring process for PBDEs in environmental and biological samples.

Characterizing permafrost soil active layer dynamics and sensitivity to landscape spatial heterogeneity in Alaska

DOE PAGES

Yi, Yonghong; Kimball, John S.; Chen, Richard; ...

2017-05-30

An important feature of the Arctic is large spatial heterogeneity in active layer conditions, which is generally poorly represented by global models. In this study, we developed a spatially integrated modelling and analysis framework combining field observations, local scale (~ 50 m) active layer thickness (ALT) and soil moisture maps derived from airborne low frequency (L + P-band) radar measurements, and global satellite environmental observations to investigate the ALT sensitivity to recent climate trends and landscape heterogeneity in Alaska. Model simulated ALT results show good correspondence with in-situ measurements in higher permafrost probability (PP ≥ 70 %) areas (n =more » 33, R = 0.60, mean bias = 1.58 cm, RMSE = 20.32 cm). The model results also reveal widespread ALT deepening since 2001, with smaller ALT increases in northern Alaska (mean trend = 0.32 ± 1.18 cm yr -1) and much larger increases (> 3 cm yr -1) across interior and southern Alaska. The positive ALT trend coincides with regional warming and a longer snow-free season (R = 0.60 ± 0.32). Uncertainty in the spatial and vertical distribution of soil organic carbon (SOC) was found to be the most important factor affecting model ALT accuracy. Here, potential improvements in characterizing SOC heterogeneity, including better spatial sampling of soil conditions and advances in remote sensing of SOC and soil moisture, will enable more accurate predictions of permafrost active layer conditions.« less

Characterizing permafrost soil active layer dynamics and sensitivity to landscape spatial heterogeneity in Alaska

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yi, Yonghong; Kimball, John S.; Chen, Richard

An important feature of the Arctic is large spatial heterogeneity in active layer conditions, which is generally poorly represented by global models. In this study, we developed a spatially integrated modelling and analysis framework combining field observations, local scale (~ 50 m) active layer thickness (ALT) and soil moisture maps derived from airborne low frequency (L + P-band) radar measurements, and global satellite environmental observations to investigate the ALT sensitivity to recent climate trends and landscape heterogeneity in Alaska. Model simulated ALT results show good correspondence with in-situ measurements in higher permafrost probability (PP ≥ 70 %) areas (n =more » 33, R = 0.60, mean bias = 1.58 cm, RMSE = 20.32 cm). The model results also reveal widespread ALT deepening since 2001, with smaller ALT increases in northern Alaska (mean trend = 0.32 ± 1.18 cm yr -1) and much larger increases (> 3 cm yr -1) across interior and southern Alaska. The positive ALT trend coincides with regional warming and a longer snow-free season (R = 0.60 ± 0.32). Uncertainty in the spatial and vertical distribution of soil organic carbon (SOC) was found to be the most important factor affecting model ALT accuracy. Here, potential improvements in characterizing SOC heterogeneity, including better spatial sampling of soil conditions and advances in remote sensing of SOC and soil moisture, will enable more accurate predictions of permafrost active layer conditions.« less

Caresoil: A multidisciplinar Project to characterize, remediate, monitor and evaluate the risk of contaminated soils in Madrid (Spain)

NASA Astrophysics Data System (ADS)

Muñoz-Martín, Alfonso; Antón, Loreto; Granja, Jose Luis; Villarroya, Fermín; Montero, Esperanza; Rodríguez, Vanesa

2016-04-01

Soil contamination can come from diffuse sources (air deposition, agriculture, etc.) or local sources, these last being related to anthropogenic activities that are potentially soil contaminating activities. According to data from the EU, in Spain, and particularly for the Autonomous Community of Madrid, it can be considered that heavy metals, toxic organic compounds (including Non Aqueous Phases Liquids, NAPLs) and combinations of both are the main problem of point sources of soil contamination in our community. The five aspects that will be applied in Caresoil Program (S2013/MAE-2739) in the analysis and remediation of a local soil contamination are: 1) the location of the source of contamination and characterization of soil and aquifer concerned, 2) evaluation of the dispersion of the plume, 3) application of effective remediation techniques, 4) monitoring the evolution of the contaminated soil and 5) risk analysis throughout this process. These aspects involve advanced technologies (hydrogeology, geophysics, geochemistry,...) that require new developing of knowledge, being necessary the contribution of several researching groups specialized in the fields previously cited, as they are those integrating CARESOIL Program. Actually two cases concerning hydrocarbon spills, as representative examples of soil local contamination in Madrid area, are being studied. The first is being remediated and we are monitoring this process to evaluate its effectiveness. In the second location we are defining the extent of contamination in soil and aquifer to define the most effective remediation technique.

Magnetic Susceptibility Measurements for in Situ Characterization of Lunar Soil

NASA Technical Reports Server (NTRS)

Oder, R. R.

1992-01-01

Magnetic separation is a viable method for concentration of components of lunar soils and rocks for use as feedstocks for manufacture of metals, oxygen, and for recovery of volatiles such as He-3. Work with lunar materials indicates that immature soils are the best candidates for magnetic beneficiation. The magnetic susceptibility at which selected soil components such as anorthite, ilmenite, or metallic iron are separated is not affected by soil maturity, but the recovery of the concentrated components is. Increasing soil maturity lowers recovery. Mature soils contain significant amounts of glass-encased metallic iron. Magnetic susceptibility, which is sensitive to metallic iron content, can be used to measure soil maturity. The relationship between the ratio of magnetic susceptibility and iron oxide and the conventional maturity parameter, I(sub s)/FeO, ferromagnetic resonant intensity divided by iron oxide content is given. The magnetic susceptibilities were determined using apparatus designed for magnetic separation of the lunar soils.

Characterization of interactions between soil solid phase and soil solution in the initial ecosystem development phase

NASA Astrophysics Data System (ADS)

Zimmermann, Claudia; Schaaf, Wolfgang

2010-05-01

analyzed in two weeks intervals for C and N contents (including δ13C), pH and ion concentrations. The results show that the initial phase of the experiment is characterized by intensive leaching of C and N from the litter and transformation as well as leaching from the substrate. Calcium leaching is caused mainly by carbonate dissolution from the substrates. In contrast, magnesium and especially potassium are leached in initially high amounts from the litter, but are strongly retained in the soil. The addition of litter promotes microbial CO2 production as shown by a strong increase of respiration due to easily available organic substances at the beginning of the experiment. Litter of L. corniculatus induced also a high initial peak in N2O emission as well as higher nitrification and NO3-N leaching. Leaching of DOC and TDN was clearly affected by the substrate texture, illustrated by intensive DOC leaching from the sand at the beginning of the experiment but shifting later to higher leaching rates from the loamy sand. References: Gerwin W, Schaaf W, Biemelt D, Fischer A, Winter S, Hüttl RF (2009) The artificial catchment 'Chicken Creek' (Lusatia, Germany) - a landscape laboratory for interdisciplinary studies of initial ecosystem development. Ecolological Engineering 35, 1786-1796.

Characterization of biocontrol bacterial strains isolated from a suppressiveness-induced soil after amendment with composted almond shells.

PubMed

Vida, Carmen; Cazorla, Francisco M; de Vicente, Antonio

The improvement in soil quality of avocado crops through organic amendments with composted almond shells has a positive effect on crop yield and plant health, and enhances soil suppressiveness against the phytopathogenic fungus Rosellinia necatrix. In previous studies, induced soil suppressiveness against this pathogen was related to stimulation of Gammaproteobacteria, especially some members of Pseudomonas spp. with biocontrol-related activities. In this work, we isolated bacteria from this suppressiveness-induced amended soil using a selective medium for Pseudomonas-like microorganisms. We characterized the obtained bacterial collection to aid in identification, including metabolic profiles, antagonistic responses, hybridization to biosynthetic genes of antifungal compounds, production of lytic exoenzymatic activities and plant growth-promotion-related traits, and sequenced and compared amplified 16S rDNA genes from representative bacteria. The final selection of representative strains mainly belonged to the genus Pseudomonas, but also included the genera Serratia and Stenotrophomonas. Their biocontrol-related activities were assayed using the experimental avocado model, and results showed that all selected strains protected the avocado roots against R. necatrix. This work confirmed the biocontrol activity of these Gammaproteobacteria-related members against R. necatrix following specific stimulation in a suppressiveness-induced soil after a composted almond shell application. Copyright © 2017 Institut Pasteur. Published by Elsevier Masson SAS. All rights reserved.

Fertirrigation with sugarcane vinasse: Foreseeing potential impacts on soil and water resources through vinasse characterization.

PubMed

Fuess, Lucas T; Rodrigues, Isabella J; Garcia, Marcelo L

2017-09-19

This paper reports the characterization of the polluting potential of sugarcane vinasse, the main wastewater from ethanol production. Compositional data from vinasse samples collected from sugarcane biorefineries were used to predict negative effects on the soil, water resources and crops potentially associated with fertirrigation, the primary final destination of vinasse in Brazil. High risks of soil salinization were associated with the land disposal of vinasse, as evidenced by the high levels of total dissolved solids (TDS; >4,000 mg L -1 ) and electrical conductivity (>6.7 dS m -1 ). The high TDS levels coupled with the high biodegradable organic content of vinasse (>14 g L -1 ) also favor organic overloading events, leading to local anaerobiosis conditions. Conversely, soil sodification should not be observed in areas fertirrigated with sugarcane vinasse, given the low Na concentrations (<66 mg L -1 ) relative to Mg (>145.1 mg L -1 ) and Ca (>458.4 mg L -1 ) levels. Priority pollutants (Cu, Cr, Ni, Pb and Zn) and phytotoxic elements (Al and Fe) were also found in the analyzed samples; however, relevant environmental impacts should not be associated with these particular constituents. Overall, the relatively simple methodology used herein could efficiently replace massive field data collection to provide a basic understanding of the fate of vinasse in the environment in order to highlight the priority points to be considered in the management of this effluent. In summary, the prompt implementation of treatment plants in distilleries, in addition to a continuous and broad compositional characterization of vinasse, is essential to guarantee its adequate reuse.

REGIONAL SOIL WATER RETENTION IN THE CONTIGUOUS US: SOURCES OF VARIABILITY AND VOLCANIC SOIL EFFECTS

EPA Science Inventory

Water retention of mineral soil is often well predicted using algorithms (pedotransfer functions) with basic soil properties but the spatial variability of these properties has not been well characterized. A further source of uncertainty is that water retention by volcanic soils...

Ecotoxicity of boric acid in standard laboratory tests with plants and soil organisms.

PubMed

Princz, Juliska; Becker, Leonie; Scheffczyk, Adam; Stephenson, Gladys; Scroggins, Rick; Moser, Thomas; Römbke, Jörg

2017-05-01

To verify the continuous sensitivity of ecotoxicological tests (mainly the test organisms), reference substances with known toxicity are regularly tested. Ideally, this substance(s) would lack specificity in its mode action, be bioavailable and readily attainable with cost-effective means of chemical characterization. Boric acid has satisfied these criteria, but has most recently been characterized as a substance of very high concern, due to reproductive effects in humans, thus limiting its recommendation as an ideal reference toxicant. However, there is probably no other chemical for which ecotoxicity in soil has been so intensively studied; an extensive literature review yielded lethal (including avoidance) and sublethal data for 38 taxa. The ecotoxicity data were evaluated using species sensitivity distributions, collectively across all taxa, and separately according to species type, endpoints, soil type and duration. The lack of specificity in the mode of action yielded broad toxicity among soil taxa and soil types, and provided a collective approach to assessing species sensitivity, while taking into consideration differences in test methodologies and exposure durations. Toxicity was species-specific with Folsomia candida and enchytraied species demonstrating the most sensitivity; among plants, the following trend occurred: dicotyledonous (more sensitive) ≫ monocotyledonous ≫ gymnosperm species. Sensitivity was also time and endpoint specific, with endpoints such as lethality and avoidance being less sensitive than reproduction effects. Furthermore, given the breadth of data and toxicity demonstrated by boric acid, lessons learned from its evaluation are discussed to recommend the properties required by an ideal reference substance for the soil compartment.

Induced polarization for characterizing and monitoring soil stabilization processes

NASA Astrophysics Data System (ADS)

Saneiyan, S.; Ntarlagiannis, D.; Werkema, D. D., Jr.

2017-12-01

Soil stabilization is critical in addressing engineering problems related to building foundation support, road construction and soil erosion among others. To increase soil strength, the stiffness of the soil is enhanced through injection/precipitation of a chemical agents or minerals. Methods such as cement injection and microbial induced carbonate precipitation (MICP) are commonly applied. Verification of a successful soil stabilization project is often challenging as treatment areas are spatially extensive and invasive sampling is expensive, time consuming and limited to sporadic points at discrete times. The geophysical method, complex conductivity (CC), is sensitive to mineral surface properties, hence a promising method to monitor soil stabilization projects. Previous laboratory work has established the sensitivity of CC on MICP processes. We performed a MICP soil stabilization projects and collected CC data for the duration of the treatment (15 days). Subsurface images show small, but very clear changes, in the area of MICP treatment; the changes observed fully agree with the bio-geochemical monitoring, and previous laboratory experiments. Our results strongly suggest that CC is sensitive to field MICP treatments. Finally, our results show that good quality data alone are not adequate for the correct interpretation of field CC data, at least when the signals are low. Informed data processing routines and the inverse modeling parameters are required to produce optimal results.

Soil microbial community profiles and functional diversity in limestone cedar glades

USGS Publications Warehouse

Cartwright, Jennifer M.; Dzantor, E. Kudjo; Momen, Bahram

2016-01-01

Rock outcrop ecosystems, such as limestone cedar glades (LCGs), are known for their rare and endemic plant species adapted to high levels of abiotic stress. Soils in LCGs are thin (< 25 cm), soil-moisture conditions fluctuate seasonally between xeric and saturated, and summer soil temperatures commonly exceed 48 °C. The effects of these stressors on soil microbial communities (SMC) remain largely unstudied, despite the importance of SMC-plant interactions in regulating the structure and function of terrestrial ecosystems. SMC profiles and functional diversity were characterized in LCGs using community level physiological profiling (CLPP) and plate-dilution frequency assays (PDFA). Most-probable number (MPN) estimates and microbial substrate-utilization diversity (H) were positively related to soil thickness, soil organic matter (OM), soil water content, and vegetation density, and were diminished in alkaline soil relative to circumneutral soil. Soil nitrate showed no relationship to SMCs, suggesting lack of N-limitation. Canonical correlation analysis indicated strong correlations between microbial CLPP patterns and several physical and chemical properties of soil, primarily temperature at the ground surface and at 4-cm depth, and secondarily soil-water content, enabling differentiation by season. Thus, it was demonstrated that several well-described abiotic determinants of plant community structure in this ecosystem are also reflected in SMC profiles.

A case study demonstration of the soil temperature extrema recovery rates after precipitation cooling at 10-cm soil depth

NASA Technical Reports Server (NTRS)

Welker, Jean Edward

1991-01-01

Since the invention of maximum and minimum thermometers in the 18th century, diurnal temperature extrema have been taken for air worldwide. At some stations, these extrema temperatures were collected at various soil depths also, and the behavior of these temperatures at a 10-cm depth at the Tifton Experimental Station in Georgia is presented. After a precipitation cooling event, the diurnal temperature maxima drop to a minimum value and then start a recovery to higher values (similar to thermal inertia). This recovery represents a measure of response to heating as a function of soil moisture and soil property. Eight different curves were fitted to a wide variety of data sets for different stations and years, and both power and exponential curves were fitted to a wide variety of data sets for different stations and years. Both power and exponential curve fits were consistently found to be statistically accurate least-square fit representations of the raw data recovery values. The predictive procedures used here were multivariate regression analyses, which are applicable to soils at a variety of depths besides the 10-cm depth presented.

DEMONSTRATION BULLETIN: CLOR-N-SOIL PCB TEST KIT L2000 PCB/CHLORIDE ANALYZER - DEXSIL CORP.

EPA Science Inventory

DEXSIL CORP(Environmental Test Kits)The Dexsil Corporation (Dexsil) produces two test kits that detect polychlorinated biphenyls (PCB) in soil: the Dexsil Clor-N-Soil PCB Screening Kit, and the Dexsil L2000 PCB/Chloride Analyzer. The Dexsil Clor-N-Soil PCB Screening Kit extr...

Characteristic variations in reflectance of surface soils

NASA Technical Reports Server (NTRS)

Stoner, E. R.; Baumgardner, M. F. (Principal Investigator)

1982-01-01

Surface soil samples from a wide range of naturally occurring soils were obtained for the purpose of studying the characteristic variations in soil reflectance as these variations relate to other soil properties and soil classification. A total 485 soil samples from the U.S. and Brazil representing 30 suborders of the 10 orders of 'Soil Taxonomy' was examined. The spectral bidirectional reflectance factor was measured on uniformly moist soils over the 0.52 to 2.32 micron wavelength range with a spectroradiometer adapted for indoor use. Five distinct soil spectral reflectance curve forms were identified according to curve shape, the presence or absence of absorption bands, and the predominance of soil organic matter and iron oxide composition. These curve forms were further characterized according to generically homogeneous soil properties in a manner similar to the subdivisions at the suborder level of 'Soil Taxonomy'. Results indicate that spectroradiometric measurements of soil spectral bidirectional reflectance factor can be used to characterize soil reflectance in terms that are meaningful to soil classification, genesis, and survey.

Occurrence and characterization of hitherto unknown Streptomyces species in semi-arid soils.

PubMed

Kumar, Surendra; Priya, E; Singh Solanki, Dilip; Sharma, Ruchika; Gehlot, Praveen; Pathak, Rakesh; Singh, S K

2016-09-01

Streptomyces the predominant genus of Actinobacteria and plays an important role in the recycling of soil organic matter and production of important secondary metabolites. The occurrence and diversity assessment of Streptomyces species revealed alkaline and poor nutrient status of soils of semi-arid region of Jodhpur, Rajasthan. The morphological and biochemical characterization of 21 Streptomyces isolates facilitated Genus level identification but were insufficient to designate species. Species designation based on 16S rRNA gene delineated 21 isolates into 14 Streptomyces species. Upon BLAST search, the test isolates exhibited 98 to 100% identities with that of the best aligned sequences of the NCBI database. The GC content of 16S rRNA gene sequences of all the Streptomyces isolates tested ranged from 59.03% to 60.94%. The multiple sequence alignment of all the 21 Streptomyces isolates generated a phylogram with high bootstrap values indicating reliable grouping of isolates based on nucleotide sequence variations by way of insertion, deletion and substitutions and 16S rRNA length polymorphism. Some of the Streptomyces species molecularly identified under present study are reported for the first time from semi-arid region of Jodhpur.

Soil Health Educational Resources

ERIC Educational Resources Information Center

Hoorman, James J.

2015-01-01

Soil health and cover crops are topics of interest to farmers, gardeners, and students. Three soil health and cover crop demonstrations provide educational resources. Demonstrations one outlines two educational cover crop seed displays, including the advantages and disadvantages. Demonstration two shows how to construct and grow a cover crop root…

Sample sizes to control error estimates in determining soil bulk density in California forest soils

Treesearch

Youzhi Han; Jianwei Zhang; Kim G. Mattson; Weidong Zhang; Thomas A. Weber

2016-01-01

Characterizing forest soil properties with high variability is challenging, sometimes requiring large numbers of soil samples. Soil bulk density is a standard variable needed along with element concentrations to calculate nutrient pools. This study aimed to determine the optimal sample size, the number of observation (n), for predicting the soil bulk density with a...

Soil health in the Mediterranean region: Development and consolidation of a multifactor index to characterize the health of agricultural lands

NASA Astrophysics Data System (ADS)

Gil, Eshel; Guy, Levy; Oshri, Rinot; Michael, Borisover; Uri, Yermiyahu; Leah, Tsror; Hanan, Eizenberg; Tal, Svoray; Alex, Furman; Yael, Mishael; Yosef, Steinberger

2017-04-01

that are difficult to control), soil-borne diseases, and pesticide fixation and release. We, a group of more than ten Israeli scientists, have recently started a multidisciplinary study aimed at developing and consolidating a multiparameter soil-health index to characterize the health of agricultural soils in Mediterranean regions. Such an index will enable us to quantitatively evaluate the contribution of different cultivation managements and reclamation activities. In order to achieve our goal, a three steps approach was adopted: 1) acquiring a multivariate component database (about 42 variables) that will be quantified in the laboratory and in the fields in two soil types of the most important agricultural region of Israel, at three different soil usage: orchard, field crops and "native" as a reference. The acquired biological, physical, and chemical variables comprise basic quantitative values in the soil health of agricultural land; (2) developing a multivariate soil-health index based on a multivariate correlation, in addition to conducting meetings with farmers and panel discussions with other scientists in the field. The whole study angled to evaluate the relative contribution of each of the biotic and abiotic parameters in order to develop a model related to soil health; and (3) to validate the efficiency of the developed index for characterizing and assessing soil-health state at the various agricultural regions in Israel where conservation and reclamation activities took place. We are open to extend our study to other areas with a Mediterranean climate and look forward to establishing cooperative activities with other research groups.

Two approaches to biological decontamination of groundwater and soil polluted by aromatics-characterization of microbial populations.

PubMed

Demnerová, Katerina; Mackova, Martina; Spevákova, Veronika; Beranova, Katarina; Kochánková, Lucie; Lovecká, Petra; Ryslavá, Edita; Macek, Tomas

2005-09-01

As part of the EU project MULTIBARRIERS, six new endogenous aerobic bacterial isolates able to grow in the presence of BTmX (benzene, toluene, m-xylene) were characterized with respect to their growth specificities. Preliminary analysis included restriction fragment length polymorphism profiles and 16S rDNA sequencing. The diversity of these strains was confirmed by denaturing gradient gel electrophoresis. Additional aerobic bacterial strains were isolated from the rhizospheres of plants grown in polychlorinated biphenyl (PCB)-contaminated soils. Pot experiments were designed to show the beneficial effect of plants on the bacterial degradation of PCBs. The effect of PCB removal from soil was evaluated and bacteria isolated from three different plant species were examined for the presence of the bph operon.

Reading the Molecular Code in Soils

NASA Astrophysics Data System (ADS)

Hess, N. J.; Tfaily, M. M.; O'Brien, S. L.; Tolic, N.; Jastrow, J. D.; Amonette, J. E.

2015-12-01

There is much that we understand about the relationship between plants, microbes, soil, and water but that understanding is incomplete at the molecular scale. With advent of high throughput genomic sequencing we are beginning to appreciate the diversity of microbial community structure and function and its response to the rhythm of plant function. Through the lens of high-resolution mass spectrometry we are getting our first glimpses of the diversity of soil and pore water organic chemistry at the molecular level. In combination, these diverse data streams are revealing traces of chemical metabolic pathways. This approach promises to reveal many exciting future discoveries, shedding light into the "black box" that exists beneath our feet. In this talk we discuss our experience with the molecular characterization of soils from native prairie to restored prairie to active corn-soybean soils from the DOE funded CSiTE project in Batavia, Illinois. We focus on how common soil separation and fractionation techniques can affect the resulting molecular soil characterization by comparing whole soils to those that have been fractionated into micro- and macro-aggregates and their corresponding silt and clay fractions. When carefully utilized and interpreted these fractionation techniques can be utilized for deepening understanding of the biotic and abiotic chemical pathways effecting the organic chemistry in the different soil fractions. In highly fractionated soils we find significant differences in organic chemistry between silt and clay separates of corresponding hierarchical aggregate fractions. However the most biologically rich information resides in the whole soil. Here we see significant gradients in soil chemistry across to active agricultural to restored to native prairie soils. These results suggest a cautionary note, namely that soil fractionation prior to molecular characterization can reveal much about the "abiotic" interactions between organic molecules and

Understanding Soil Moisture

USDA-ARS?s Scientific Manuscript database

Understanding soil moisture is critical for landscape irrigation management. This landscaep irrigation seminar will compare volumetric and matric potential soil-moisture sensors, discuss the relationship between their readings and demonstrate how to use these data. Soil water sensors attempt to sens...

Results of the 1998 Field Demonstration and Preliminary Implementation Guidance for Phytoremediation of Lead-Contaminated Soil at the Twin Cities Army Ammunition Plant, Arden Hills, Minnesota

DTIC Science & Technology

1999-03-01

Results of the 1998 Field Demonstration and Preliminary Implementation Guidance for Phytoremediation of Lead-Contaminated Soil at the Twin... Phytoremediation of Lead-Contaminated Soil at the Twin Cities Army Ammunition Plant, Arden Hills, Minnesota. 12. PERSONAL AUTHOR(S) A. P. Behel, Jr...CODES FIELD GROUP SUB-GROUP 18. SUBJECT TERMS (Continue on reverse if necessary and identify by block number) Phytoremediation of Lead-Contaminated

Characterizing agricultural soil nitrous acid (HONO) and nitric oxide (NO) emissions with their nitrogen isotopic composition

NASA Astrophysics Data System (ADS)

Chai, J.; Miller, D. J.; Guo, F.; Dell, C. J.; Karsten, H.; Hastings, M. G.

2017-12-01

Nitrous acid (HONO) is a major source of atmospheric hydroxyl radical (OH), which greatly impacts air quality and climate. Fertilized soils may be important sources of HONO in addition to nitric oxide (NO). However, soil HONO emissions are especially challenging to quantify due to huge spatial and temporal variation as well as unknown HONO chemistry. With no in-situ measurements available, soil HONO emissions are highly uncertain. Isotopic analysis of HONO may provide a tool for tracking these sources. We characterize in situ soil HONO and NO fluxes and their nitrogen isotopic composition (δ15N) across manure management and meteorological conditions during a sustainable dairy cropping study in State College, Pennsylvania. HONO and NO were simultaneously collected at hourly resolution from a custom-coated dynamic soil flux chamber ( 3 LPM) using annular denuder system (ADS) coupled with an alkaline-permanganate NOx collection system for offline isotopic analysis of δ15N with ±0.6 ‰ (HONO) and ±1.5 ‰ (NO) precision. The ADS method was tested using laboratory generated HONO flowing through the chamber to verify near 100% collection (with no isotopic fractionation) and suitability for soil HONO collection. Corn-soybean rotation plots (rain-fed) were sampled following dairy manure application with no-till shallow-disk injection (112 kg N ha-1) and broadcast with tillage incorporation (129 kg N ha-1) during spring 2017. Soil HONO fluxes (n=10) ranged from 0.1-0.6 ng N-HONO m-2 s-1, 4-28% of total HONO+NO mass fluxes. HONO and NO fluxes were correlated, with both declining during the measurement period. The soil δ15N-HONO flux weighted mean ±1σ of -15 ± 6‰ was less negative than δ15N of simultaneously collected NO (-29 ± 8‰). This can potentially be explained by fractionations associated with microbial conversion of nitrite, abiotic production of HONO from soil nitrite, and uptake and release with changing soil moisture. Our results have implications for

Relating soil pore geometry to soil water content dynamics decomposed at multiple frequencies

NASA Astrophysics Data System (ADS)

Qin, Mingming; Gimenez, Daniel; Cooper, Miguel

2016-04-01

Soil structure is a critical factor determining the response of soil water content to meteorological inputs such as precipitation. Wavelet analysis can be used to filter a signal into several wavelet components, each characterizing a given frequency. The purpose of this research was to investigate relationships between the geometry of soil pore systems and the various wavelet components derived from soil water content dynamics. The two study sites investigated were located in the state of São Paulo, Brazil. Each site was comprised of five soil profiles, the first site was situated along a 300-meter transect with about 10% slope in a tropical semi-deciduous forest, while the second one spanned 230-meter over a Brazilian savanna with a slope of about 6%. For each profile, between two to four Water Content Reflectometer CS615 (Campbell Scientific, Inc.) probes were installed according to horizonation at depths varying between 0.1 m and 2.3 m. Bulk soil, three soil cores, and one undisturbed soil block were sampled from selected horizons for determining particle size distributions, water retention curves, and pore geometry, respectively. Pore shape and size were determined from binary images obtained from resin-impregnated blocks and used to characterize pore geometry. Soil water contents were recorded at a 20-minute interval over a 4-month period. The Mexican hat wavelet was used to decompose soil water content measurements into wavelet components. The responses of wavelet components to wetting and drying cycles were characterized by the median height of the peaks in each wavelet component and were correlated with particular pore shapes and sizes. For instance, large elongated and irregular pores, largely responsible for the transmission of water, were significantly correlated with wavelet components at high frequencies (40 minutes to 48 hours) while rounded pores, typically associated to water retention, were only significantly correlated to lower frequency ranges

Towards a global understanding of vertical soil carbon dynamics: meta-analysis of soil 14C data

NASA Astrophysics Data System (ADS)

hatte, C.; Balesdent, J.; Guiot, J.

2012-12-01

Soil represents the largest terrestrial storage mechanism for atmospheric carbon from photosynthesis, with estimates ranging from 1600 Pg C within the top 1 meter to 2350 Pg C for the top 3 meters. These values are at least 2.5 times greater than atmospheric C pools. Small changes in soil organic carbon storage could result in feedback to atmospheric CO2 and the sensitivity of soil organic matter to changes in temperature, and precipitation remains a critical area of research with respect to the global carbon cycle. As an intermediate storage mechanism for organic material through time, the vertical profile of carbon generally shows an age continuum with depth. Radiocarbon provides critical information for understanding carbon exchanges between soils and atmosphere, and within soil layers. Natural and "bomb" radiocarbon has been used to demonstrate the importance and nature of the soil carbon response to climatic and human impacts on decadal to millennial timescales. Radiocarbon signatures of bulk, or chemically or physically fractionated soil, or even of specific organic compounds, offer one of the only ways to infer terrestrial carbon turnover times or test ecosystem carbon models. We compiled data from the literature on radiocarbon distribution on soil profiles and characterized each study according to the following categories: soil type, analyzed organic fraction, location (latitude, longitude, elevation), climate (temperature, precipitation), land use and sampling year. Based on the compiled data, soil carbon 14C profiles were reconstructed for each of the 226 sites. We report here partial results obtained by statistical analyses of portion of this database, i.e. bulk and bulk-like organic matter and sampling year posterior to 1980. We highlight here 14C vertical pattern in relationship with external parameters (climate, location and land use).

Biases of chamber methods for measuring soil CO2 efflux demonstrated with a laboratory apparatus.

Treesearch

S. Mark Nay; Kim G. Mattson; Bernard T. Bormann

1994-01-01

Investigators have historically measured soil CO2 efflux as an indicator of soil microbial and root activity and more recently in calculations of carbon budgets. The most common methods estimate CO2 efflux by placing a chamber over the soil surface and quantifying the amount of CO2 entering the...

Characterization and on-sky demonstration of an integrated photonic spectrograph for astronomy.

PubMed

Cvetojevic, N; Lawrence, J S; Ellis, S C; Bland-Hawthorn, J; Haynes, R; Horton, A

2009-10-12

We present results from the first on-sky demonstration of a prototype astronomical integrated photonic spectrograph (IPS) using the Anglo-Australian Telescope near-infrared imaging spectrometer (IRIS2) at Siding Spring Observatory to observe atmospheric molecular OH emission lines. We have succeeded in detecting upwards of 27 lines, and demonstrated the practicality of the IPS device for astronomy. Furthermore, we present a laboratory characterization of the device, which is a modified version of a commercial arrayed-waveguide grating multiplexer. We measure the spectral resolution full-width-half-maximum to be 0.75 +/- 0.05 nm (giving R = lambda/deltalambda = 2100 +/- 150 at 1500 nm). We find the free spectral range to be 57.4 +/- 0.6 nm and the peak total efficiency to be approximately 65%. Finally, we briefly discuss the future steps required to realize an astronomical instrument based on this technology concept.

Demonstrations in Solute Transport Using Dyes: Part I. Procedures and Results.

ERIC Educational Resources Information Center

Butters, Greg; Bandaranayake, Wije

1993-01-01

Presents the general theory to explain chemical movement in soil. Describes classroom demonstrations with visually stimulating results that show the effects of soil structure, soil texture, soil pH, and soluble organic matter on that movement. (MDH)

Spatiotemporal characterization of soil moisture fields in agricultural areas using cosmic-ray neutron probes and data fusion

NASA Astrophysics Data System (ADS)

Franz, Trenton; Wang, Tiejun

2015-04-01

Approximately 40% of global food production comes from irrigated agriculture. With the increasing demand for food even greater pressures will be placed on water resources within these systems. In this work we aimed to characterize the spatial and temporal patterns of soil moisture at the field-scale (~500 m) using the newly developed cosmic-ray neutron rover near Waco, NE USA. Here we mapped soil moisture of 144 quarter section fields (a mix of maize, soybean, and natural areas) each week during the 2014 growing season (May to September). The 12 by 12 km study domain also contained three stationary cosmic-ray neutron probes for independent validation of the rover surveys. Basic statistical analysis of the domain indicated a strong relationship between the mean and variance of soil moisture at several averaging scales. The relationships between the mean and higher order moments were not significant. Scaling analysis indicated strong power law behavior between the variance of soil moisture and averaging area with minimal dependence of mean soil moisture on the slope of the power law function. In addition, we combined the data from the three stationary cosmic-ray neutron probes and mobile surveys using linear regression to derive a daily soil moisture product at 1, 3, and 12 km spatial resolutions for the entire growing season. The statistical relationships derived from the rover dataset offer a novel set of observations that will be useful in: 1) calibrating and validating land surface models, 2) calibrating and validating crop models, 3) soil moisture covariance estimates for statistical downscaling of remote sensing products such as SMOS and SMAP, and 4) provide daily center-pivot scale mean soil moisture data for optimal irrigation timing and volume amounts.

Characterizing soil erosion potential using electrical resistivity imaging : technical summary.

DOT National Transportation Integrated Search

2017-04-01

The erosion rate, or erodibility, of soil depends on many soil characteristics : including: plasticity, water content, grain size, percent clay, compaction, and shear : strength. Many of these characteristics also influence soil in situ bulk electric...

Characterizing soil erosion potential using electrical resistivity imaging : final report.

DOT National Transportation Integrated Search

2017-04-01

The erosion rate, or erodibility, of soil depends on many soil characteristics including: plasticity, : water content, grain size, percent clay, compaction, and shear strength. Many of these characteristics also : influence soil in situ bulk electric...

Characterization and analysis of pasture degradation in Rondonia using remote sensing

NASA Astrophysics Data System (ADS)

Numata, Izaya

2006-04-01

Although pasture degradation has been a regional concern in Amazonian ecosystems, our ability to characterize and monitor pasture degradation under different environmental and human-related conditions is still limited. This dissertation evaluated pasture degradation as it varied due to environmental and human factors across different scales by combining field measures, ancillary data, and remote sensing. To better understand the link between pasture nutrients and soil chemistry, samples were analyzed in the laboratory demonstrating that pasture soil fertility and grass nutrients varied significantly according to soil order. Pastures established on Alfisols, nutrient-rich soils, had higher levels of Phosphorus in soil and grass compared to pastures established on Oxisols and Ultisols. To evaluate remote sensing measures of pasture biophysical properties related to pasture degradation, remote sensing analysis focused on a variety of sensors that provide a range in spatial, spectral and temporal scales, including Landsat Thematic Mapper (TM), a field spectrometer, Hyperion, and the Moderate Resolution Imaging Spectroradiometer (MODIS). Of the measures derived from Landsat, degraded pastures were best characterized by high non-photosynthetic vegetation (NPV) and low shade fractions, while pastures with high biomass were characterized by high green vegetation and low NPV fractions. Absorption features calculated from hyperspectral spectra collected in the field, including water and ligno-cellulose absorption depth and area, provided the best estimates of field grass measures. Temporal MODIS Normalized Difference Vegetation Index (NDVI) data were used to characterize changes in pasture quality across the region and through time. Degraded pastures were characterized by low temporal NDVI variation and occurred in dry or very wet climate conditions and on nutrient poor soils. Productive pastures were characterized by high temporal NDVI variation, were predominantly found

NEGLECTED COMPONENTS OF BIODIVERSITY: SOIL ORIBATID MITES, COMMUNITY STRUCTURE AND SOIL RECOVERY

EPA Science Inventory

Oribatid mites are an abundant and diverse component of soils in regional pine forests, and are valuable in characterizing the biodiversity of these forested lands. We sampled oribatid mites using soil cores and leaf litterbags, in young aggrading forest stands. Comparing these...

Near infrared index to assess the effect of soil tillage and fertilizer on soil water content.

NASA Astrophysics Data System (ADS)

Soltani, Ines; Fouad, Youssef; Michot, Didier; Breger, Pascale; Dubois, Remy; Pichelin, Pascal; Cudennec, Christophe

2017-04-01

Characterization of soil hydraulic properties is important for assessing soil water regime in agricultural fields. In the laboratory, measurements of soil hydrodynamic properties are costly and time consuming. Numerous studies recently demonstrated that reflectance spectroscopy can give a rapid estimation of several soil properties including those related with soil water content. The main objective of this research study was to show that near infrared spectroscopy (NIRS) is a useful tool to study the combined effect of soil tillage and fertilizer input on soil hydrodynamic properties. The study was carried out on soil samples collected from an experimental station located in Brittany, France. In 2000, the field was designed in a split-plot combining three tillage practices and four sources of fertilizers (mineral and organic). Undisturbed soil blocks were sampled in 2012 from three different depths of topsoil (0-7 cm, 7-15 cm and 15-20 cm) at each treatment. From each soil block, four aggregates with 3-4 cm diameter by 5-6 cm height were collected. Soil aggregates were first saturated and were then drained through 10 matric potential, from saturation up to permanent wilting point (pF=4.2), by successively using a suction table and a pressure chamber. Once the desired water pressure head was reached, soil samples were scanned to acquire reflectance spectra between 400-2500 nm using a handheld spectroradiometer equipped with a contact probe. Each spectrum was transformed into continuum removal, and an index based on the full width at half maximum (FWHM) of the absorption feature around 1920 nm was calculated. This index showed a linear relationship (R2>0.9) with volumetric water content. Moreover our results showed that the slope of the line was well correlated with the range of treatment. Overall, our findings indicate that the absorption feature of continuum removal spectra around 1900 nm can be useful to study the effect, particularly, of tillage on hydrodynamic

AeroMACS System Characterization and Demonstrations

NASA Technical Reports Server (NTRS)

Kerczewski, Robert J.; Apaza, Rafael D.; Dimond, Robert P.

2013-01-01

This The Aeronautical Mobile Airport Communications System (AeroMACS) is being developed to provide a new broadband wireless communications capability for safety critical communications in the airport surface domain, providing connectivity to aircraft and other ground vehicles as well as connections between other critical airport fixed assets. AeroMACS development has progressed from requirements definition through technology definition, prototype deployment and testing, and now into national and international standards development. The first prototype AeroMACS system has been deployed at the Cleveland Hopkins International Airport (CLE) and the adjacent NASA Glenn Research Center (GRC). During the past 3 years, extensive technical testing has taken place to characterize the performance of the AeroMACS prototype and provide technical support for the standards development process. The testing has characterized AeroMACS link and network performance over a variety of conditions for both fixed and mobile data transmission and has included basic system performance testing and fixed and mobile applications testing. This paper provides a summary of the AeroMACS performance testing and the status of standardization activities that the testing supports.

AeroMACS System Characterization and Demonstrations

NASA Technical Reports Server (NTRS)

Kerczewski, Robert J.; Apaza, Rafael D.; Dimond, Robert P.

2013-01-01

The Aeronautical Mobile Airport Communications System (AeroMACS) is being developed to provide a new broadband wireless communications capability for safety critical communications in the airport surface domain, providing connectivity to aircraft and other ground vehicles as well as connections between other critical airport fixed assets. AeroMACS development has progressed from requirements definition through technology definition, prototype deployment and testing, and now into national and international standards development. The first prototype AeroMACS system has been deployed at the Cleveland Hopkins International Airport (CLE) and the adjacent NASA Glenn Research Center (GRC). During the past three years, extensive technical testing has taken place to characterize the performance of the AeroMACS prototype and provide technical support for the standards development process. The testing has characterized AeroMACS link and network performance over a variety of conditions for both fixed and mobile data transmission and has included basic system performance testing and fixed and mobile applications testing. This paper provides a summary of the AeroMACS performance testing and the status of standardization activities that the testing supports.

AeroMACS system characterization and demonstrations

NASA Astrophysics Data System (ADS)

Kerczewski, R. J.; Apaza, R. D.; Dimond, R. P.

This The Aeronautical Mobile Airport Communications System (AeroMACS) is being developed to provide a new broadband wireless communications capability for safety critical communications in the airport surface domain, providing connectivity to aircraft and other ground vehicles as well as connections between other critical airport fixed assets. AeroMACS development has progressed from requirements definition through technology definition, prototype deployment and testing, and now into national and international standards development. The first prototype AeroMACS system has been deployed at the Cleveland Hopkins International Airport (CLE) and the adjacent NASA Glenn Research Center (GRC). During the past three years, extensive technical testing has taken place to characterize the performance of the AeroMACS prototype and provide technical support for the standards development process. The testing has characterized AeroMACS link and network performance over a variety of conditions for both fixed and mobile data transmission and has included basic system performance testing and fixed and mobile applications testing. This paper provides a summary of the AeroMACS performance testing and the status of standardization activities that the testing supports.

DEMONSTRATION BULLETIN: BESCORP SOIL WASHING SYSTEM ALASKAN BATTERY ENTERPRISES SITE - BRICE ENVIRONMENTAL SERVICES CORPORATION

EPA Science Inventory

The BESCORP Soil Washing System is an aqueous volume reduction system that utilizes trommel agitation, high-pressure washing, sizing, and density separation to remove lead, lead compounds, and battery casing chips from soil contaminated by broken lead batteries. The basic concept...

Soil water repellency of the artificial soil and natural soil in rocky slopes as affected by the drought stress and polyacrylamide.

PubMed

Chen, Zhang; Wang, Ruixin; Han, Pengyuan; Sun, Hailong; Sun, Haifeng; Li, Chengjun; Yang, Lixia

2018-04-01

Soil water repellency (SWR) causes reduced soil water storage, enhanced runoff and reduced ecosystem productivity. Therefore, characterization of SWR is a prerequisite for effective environmental management. SWR has been reported under different soils, land uses and regions of the world, particularly in forest land and after wildfires; however, the understanding of this variable in the artificial soil of rocky slope eco-engineering is still rather limited. This study presented the characterization of SWR in the artificial soil affected by the polyacrylamide (PAM) and drought stress. There were two molecular weights of PAM, and the CK was without PAM application. Three types of soil were studied: natural soil and two types of artificial soil which have been sprayed for 1y and 5y, respectively. The drought stress experiments had three drought gradients, lasted for three weeks. Water repellency index (WRI) and soil-water contact angle (β) were determined using intrinsic sorptivity method by measuring the water sorptivity (S W ) and ethanol sorptivity (S E ) in all soil samples. The results showed that (1) Polyacrylamide treatments significantly increased S W by 3% to 38%, and reduced S E by 1% to 15%, WRI by 6% to 38%, β by 3% to 23% compared to the control group. Polyacrylamide treatments also increased water-stable aggregates content and total porosity by 22% to 33%, 11% to 20% relative to the control, while PAM with a higher molecular weight performed best. (2) The interaction between PAM and drought stress had a significant effect on WRI and β for all soil types (P<0.01) while it only had a significant effect on S W and S E for the artificial soil (P<0.01). (3) The artificial soil had a greater WRI and β than the natural soil. Copyright © 2017 Elsevier B.V. All rights reserved.

Isolation and characterization of efficient isoxaben-transforming Microbacterium sp strains from four European soils.

PubMed

Arrault, Sandra; Desaint, Stephane; Catroux, Colette; Sémon, Etienne; Mougin, Christian; Fournier, Jean Claude

2002-12-01

Nutrient-agar plates containing isoxaben (500 mg litre(-1)) were used to isolate isoxaben-metabolising bacteria from four European soils incubated with the herbicide under laboratory conditions. In flask experiments, inoculation of a basal salts medium containing nitrogen and [phenyl-U-14C]isoxaben with an isolate (B2b) resulted in 33% recovery of the initial radioactivity as [14C]carbon dioxide after 2 weeks. A major metabolite identified by GC-MS and NMR analysis as 3-(1-ethyl-1-methylpropyl)isoxazol-5-ylamine accumulated both in basal salts and nutrient broth media. 2,6-Dimethoxybenzoic acid, a suspected metabolite of isoxaben, was not detected in either liquid media. However, the capability of the B2b isolate to use 2,6-dimethoxybenzoic acid as a source of carbon was demonstrated. Soil inoculation with the B2b strain resulted in an increase in the recovery of [14C] carbon dioxide from both [phenyl-U-14C] and [isoxazole-5-14C]isoxaben. The metabolite identified as 3-(1-ethyl-1-methylpropyl)isoxazole-5-ylamine only accumulated if the soil was autoclaved before inoculation. This metabolite was rapidly mineralized by the microflora of a natural soil without history of isoxaben treatment. Homology patterns of sequenced 16S rDNA between isoxaben-transforming isolates and reference strains showed that the four isolates identified belonged to the genus Microbacterium.

Recent developments in biochar as an effective tool for agricultural soil management: a review.

PubMed

Laghari, Mahmood; Naidu, Ravi; Xiao, Bo; Hu, Zhiquan; Mirjat, Muhammad Saffar; Hu, Mian; Kandhro, Muhammad Nawaz; Chen, Zhihua; Guo, Dabin; Jogi, Qamardudin; Abudi, Zaidun Naji; Fazal, Saima

2016-12-01

In recent years biochar has been demonstrated to be a useful amendment to sequester carbon and reduce greenhouse gas emission from the soil to the atmosphere. Hence it can help to mitigate global environment change. Some studies have shown that biochar addition to agricultural soils increases crop production. The mechanisms involved are: increased soil aeration and water-holding capacity, enhanced microbial activity and plant nutrient status in soil, and alteration of some important soil chemical properties. This review provides an in-depth consideration of the production, characterization and agricultural use of different biochars. Biochar is a complex organic material and its characteristics vary with production conditions and the feedstock used. The agronomic benefits of biochar solely depend upon the use of particular types of biochar with proper field application rate under appropriate soil types and conditions. © 2016 Society of Chemical Industry. © 2016 Society of Chemical Industry.

The Impact of Model and Rainfall Forcing Errors on Characterizing Soil Moisture Uncertainty in Land Surface Modeling

NASA Technical Reports Server (NTRS)

Maggioni, V.; Anagnostou, E. N.; Reichle, R. H.

2013-01-01

The contribution of rainfall forcing errors relative to model (structural and parameter) uncertainty in the prediction of soil moisture is investigated by integrating the NASA Catchment Land Surface Model (CLSM), forced with hydro-meteorological data, in the Oklahoma region. Rainfall-forcing uncertainty is introduced using a stochastic error model that generates ensemble rainfall fields from satellite rainfall products. The ensemble satellite rain fields are propagated through CLSM to produce soil moisture ensembles. Errors in CLSM are modeled with two different approaches: either by perturbing model parameters (representing model parameter uncertainty) or by adding randomly generated noise (representing model structure and parameter uncertainty) to the model prognostic variables. Our findings highlight that the method currently used in the NASA GEOS-5 Land Data Assimilation System to perturb CLSM variables poorly describes the uncertainty in the predicted soil moisture, even when combined with rainfall model perturbations. On the other hand, by adding model parameter perturbations to rainfall forcing perturbations, a better characterization of uncertainty in soil moisture simulations is observed. Specifically, an analysis of the rank histograms shows that the most consistent ensemble of soil moisture is obtained by combining rainfall and model parameter perturbations. When rainfall forcing and model prognostic perturbations are added, the rank histogram shows a U-shape at the domain average scale, which corresponds to a lack of variability in the forecast ensemble. The more accurate estimation of the soil moisture prediction uncertainty obtained by combining rainfall and parameter perturbations is encouraging for the application of this approach in ensemble data assimilation systems.

Soils of the Summer Garden (Saint Petersburg)

NASA Astrophysics Data System (ADS)

Matinyan, N. N.; Bakhmatova, K. A.; Korentsvit, V. A.

2017-06-01

Soils of the Summer Garden—the first regular (French-style) garden in Russia—are characterized on the basis of the materials of field study performed during reconstruction of the garden in 2005-2011. Most of these soils are filled soils—urbostratozems—underlain by the loamy sands deposited in the Littorina Sea or by the buried gray-humus gleyic and gleyed soils. Urbostratozems are characterized by the slightly acid reaction in the topsoil horizons and slightly alkaline reaction in the middle-profile and lower horizons. The humus content in them varies from 0.2 to 6.8%; in the buried gray-humus soils, it is within 1.3-2.6%. The soils of the garden are characterized by the high and extremely high content of available phosphorus and the predominantly low content of available potassium as determined by Machigin's method. The bulk content of Pb in the surface soil horizons during the period of our study exceeded the maximum permissible concentration by 3-20 times; the bulk contents of Cu and Zn exceeded the tentative permissible concentrations for coarse-textured soils by 2-6 and 4-20 times, respectively. The main sources of the soil contamination by the heavy metals are the nearby highways. Local contaminated area was also found near the household yard.

Demonstration and Characterization of Biomolecular Enrichment on Microfluidic Aptamer-Functionalized Surfaces

PubMed Central

Nguyen, Thai Huu; Pei, Renjun; Stojanovic, Milan; Lin, Qiao

2010-01-01

This paper demonstrates and systematically characterizes the enrichment of biomolecular compounds using aptamer-functionalized surfaces within a microfluidic device. The device consists of a microchamber packed with aptamer-functionalized microbeads and integrated with a microheater and temperature sensor to enable thermally controlled binding and release of biomolecules by the aptamer. We first present an equilibrium binding-based analytical model to understand the enrichment process. The characteristics of the aptamer-analyte binding and enrichment are then experimentally studied, using adenosine monophosphate (AMP) and a specific RNA aptamer as a model system. The temporal process of AMP binding to the aptamer is found to be primarily determined by the aptamer-AMP binding kinetics. The temporal process of aptamer-AMP dissociation at varying temperatures is also obtained and observed to occur relatively rapidly (< 2 s). The specificity of the enrichment is next confirmed by performing selective enrichment of AMP from a sample containing biomolecular impurities. Finally, we investigate the enrichment of AMP by either discrete or continuous introduction of a dilute sample into the microchamber, demonstrating enrichment factors ranging from 566 to 686×, which agree with predictions of the analytical model. PMID:21765612

Characterization of PCC Cement by Addition of Napa Soil from Subdistrict Sarilamak 50 Kota District as Alternative Additional Material for Semen Padang

NASA Astrophysics Data System (ADS)

Mawardi, M.; Deyundha, D.; Zainul, R.; Zalmi P, R.

2018-04-01

The study has been conducted to determine characteristics of the portland composite cement by the addition of napa soil from Sarilamak subdistrict, 50 Kota District as an alternative additional material at PT. Semen Padang. Napa soil is a natural material highly containing silica and alumina minerals so that it can be one of material in producing cement. This study aims to determine the effect of napa soil on the quality of portland composite cement. Napa soil used in the variation compositions 0%, 4%, 8%, 12% and 16%, for control of cement used 8 % of pozzolan and 0 % of napa soil. Determination of cement quality by testing cement characteristics include blaine test, sieving, lost of ignition or LOI, insoluble residue, normal consistency, setting time and compressive strength. Cement was characterized using XRF. Fineness of cement decreases with the addition of napa soil. Lost of Ignition of cement decreased, while the insoluble residue increased with the addition of napa soil. Normal consistency of cement increasing, so does initial setting time and final setting time of cement. While the resultant compressive strength decreases with the addition of napa soil on 28 days, 342, 325, 307, 306, and 300 kg / cm2.

Technology summary of the in situ bioremediation demonstration (methane biostimulation) via horizontal wells at the Savannah River Site Integrated Demonstration Project

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hazen, T.C.; Looney, B.B.; Fliermans, C.B.

1994-06-01

The US Department of Energy, Office of Technology Development, has been sponsoring full-scale environmental restoration technology demonstrations for the past 4 years. The Savannah River Site Integrated Demonstration focuses on ``Clean-up of Soils ad Groundwater Contaminated with Chlorinated VOCs.`` Several laboratories including our own had demonstrated the ability of methanotrophic bacteria to completely degrade or mineralize chlorinated solvents, and these bacteria were naturally found in soil and aquifer material. Thus the test consisted of injection of methane mixed with air into the contaminated aquifer via a horizontal well and extraction from the vadose zone via a parallel horizontal well.

High-throughput metagenomic analysis of petroleum-contaminated soil microbiome reveals the versatility in xenobiotic aromatics metabolism.

PubMed

Bao, Yun-Juan; Xu, Zixiang; Li, Yang; Yao, Zhi; Sun, Jibin; Song, Hui

2017-06-01

The soil with petroleum contamination is one of the most studied soil ecosystems due to its rich microorganisms for hydrocarbon degradation and broad applications in bioremediation. However, our understanding of the genomic properties and functional traits of the soil microbiome is limited. In this study, we used high-throughput metagenomic sequencing to comprehensively study the microbial community from petroleum-contaminated soils near Tianjin Dagang oilfield in eastern China. The analysis reveals that the soil metagenome is characterized by high level of community diversity and metabolic versatility. The metageome community is predominated by γ-Proteobacteria and α-Proteobacteria, which are key players for petroleum hydrocarbon degradation. The functional study demonstrates over-represented enzyme groups and pathways involved in degradation of a broad set of xenobiotic aromatic compounds, including toluene, xylene, chlorobenzoate, aminobenzoate, DDT, methylnaphthalene, and bisphenol. A composite metabolic network is proposed for the identified pathways, thus consolidating our identification of the pathways. The overall data demonstrated the great potential of the studied soil microbiome in the xenobiotic aromatics degradation. The results not only establish a rich reservoir for novel enzyme discovery but also provide putative applications in bioremediation. Copyright © 2016. Published by Elsevier B.V.

Characterization of Soil Heterogeneity Across Scales in an Intensively Investigated Soil Volume

NASA Astrophysics Data System (ADS)

Patterson, Matthew; Gimenez, Daniel; Nemes, Attila; Dathe, Annette; French, Helen; Bloem, Esther; Koestel, John; Jarvis, Nick

2016-04-01

Heterogeneous water flow in undisturbed soils is a natural occurrence that is complex to model due to potential changes in hydraulic properties in soils over changes in space. The use of geophysical methods, such as Electrical Resistivity Tomography (ERT), can provide a minimally-invasive approximation of the spatial heterogeneity of the soil. This spatial distribution can then be combined with measured hydraulic properties to inform a model. An experiment was conducted on an Intensively Investigated Soil Volume (IISV), with dimensions of 2m x 1m x 0.8m, located in an agricultural field that is part of the Gryteland catchment in Ås, Norway. The location of the IISV was determined through surface ERT runs at two sequential resolutions. The first run was used to find an area of higher apparent electrical resistivity in a 23.5 x 11.5 m area with 0.5 m spacing. The second run measured apparent electrical resistivity in a 4.7 x 1 m area with 0.1 m spacing, from which the final IISV volume was derived. Distinct features found in the higher resolution run of the IISV, including a recent tire track from a harvester, were used as a spatial reference point for the installation of 20 pairs of TDR probes and tensiometers. The instruments measured water content, temperature and pressure potential at 10 minute intervals and ran continuously for a period of two weeks. After completion of the data collection the IISV was intensively sampled, with 30 samples taken for bulk density, 62 for hydraulic property measurements, and 20 to be used for both CT scanning and hydraulic property measurements. The measurement of hydraulic properties is ongoing and retention will be measured in the 0 - 100 cm range on a sand table, and from 100 - approx. 900 cm with an automated evaporation method. The formation of spatial clusters to represent the soil heterogeneity as relatively homogeneous units based on mesoscale properties like apparent electrical resistivity, bulk density, texture, in

Soil Biogeochemistry Case Study: Cold Springs, Nevada

NASA Astrophysics Data System (ADS)

Morgan, T. A.; Verburg, P.

2016-12-01

The University of Nevada, Reno (UNR) Soil Biogeochemistry class, mentored by Dr. Robert Blank, United States Department of Agriculture/ Agricultural Research Service/ Great Basin Rangelands Research Unit (USDA/ARS/GBRRU) soil scientist, examined lithospheric biogeochemical cycles in a sagebrush ecosystem in Cold Springs, Nevada. The Cold Springs, Nevada area was selected to examine soil nutrient cycling under four landscape conditions: playa (no vegetation), invasive species mix of annual grasses and forbs, rabbitbrush (Ericameria nauseosa) encroached area, and sagebrush (Artemisia tridentata) dominant area. Five soil pits were excavated to describe pedons under each of the four landscape conditions. Soil samples were collected every 20 cm throughout a one meter profile, and were brought to the USDA/ARS/GBRRU laboratory for chemical analysis and characterization of physical and nutrient properties. In playa soils, solution-phase Na+ and SO4-2 had the highest concentrations on the top 20 cm. The invasive species soils showed a reduced molar NH4+ in mineral N throughout the profile. These soils also demonstrated a strong correlation between Fe and organic C. In the Rabbitbrush soils, extracted diethylenetriaminepentaacetic acid (DTPA) Fe appears to be cycled by depth across four of the five sites. However, the remaining rabbitbrush site which had the highest concentration of DTPA Fe, did not decline with depth. This indicated a nutrient specific lack of biogeochemical cycling. The rabbitbrush site also had almost double the organic C of the other four sites. Solution-phase K and Bicarb P expressed the highest concentrations in the 40-60 cm depth range. In three of the five sagebrush soils, the DTPA Mn concentration was highest at the surface and declined with depth. The remaining two sagebrush sites displayed the opposite trend. This case study revealed considerable variation in nutrient concentrations and biogeochemical cycling between soils and vegetation type.

Site characterization and analysis penetrometer system

NASA Astrophysics Data System (ADS)

Heath, Jeff

1995-04-01

The site characterization and analysis penetrometer system (SCAPS) with laser induced fluorescence (LIF) sensors is being demonstrated as a quick field screening technique to determine the physical and chemical characteristics of subsurface soil and contaminants at hazardous waste sites SCAPS is a collaborative development effort of the Navy, Army, and Air Force under the Tri-Service SCAPS Program. The current SCAPS configuration is designed to quickly and cost-effectively distinguish areas contaminated with petroleum products (hydrocarbons) from unaffected areas.

Soil pollution in Central district of Saint-Petersburg (Russia)

NASA Astrophysics Data System (ADS)

Terekhina, Natalia; Ufimtseva, Margarita

2015-04-01

Analysis of soil samples of upper horizon for the content of chemical elements (Fe, Mn, Cu, Zn, Pb, Ni, Cr, Co, Cd, Ba, Sr) was carried out by atomic emission with inductively coupled plasma. A relative indicator of soil contamination degree is a concentration coefficient, representing the ratio of metal content in tested soil samples to the local background value of the corresponding element. Total pollution index is calculated by the concentration coefficients, which are greater than 1, taking into account the hazard class of metals (1 class - Zn, Pb ,Cd; 2 - class Cr, Ni, Cu ,Со; 3 class - Fe, Mn, Sr, Ba). Analysis of trace element of urban soils demonstrated mosaic patterns of pollution for Central district. The method of correlation sets constructing and factor analysis revealed three groups of chemical elements having a strong and significant association with each other: Pb-Cu-Cd-Zn-Ba, Ni-Cr-Co, Fe-Mn. Elements of the first group are characterized by high values of concentration coefficient and are the main pollutants - their average content is 3-11 times higher than background values. Strontium does not have strong correlation with the other elements, and its lowest concentration coefficient indicates that the element can not be regarded as a pollutant. The spatial distribution of the total pollution index identified several sources of pollution, the origin of which may be different. The main reason is probably the impact of vehicle emissions, although local pollution of soil is possible (the soils, contaminated during reconstruction of lawns, dumping of construction materials, etc.). Differentiated assessment of database shows that 48% of samples refer to dangerous pollution category, 37% - to moderately dangerous category, 15% - to allowable category. Thus, almost half of the district is characterized as dangerous in terms of soil contamination. Solution of the problem of soil contamination is recommended in three ways: reducing the intensity of

Soils and the soil cover of the Valley of Geysers

NASA Astrophysics Data System (ADS)

Kostyuk, D. N.; Gennadiev, A. N.

2014-06-01

The results of field studies of the soil cover within the tourist part of the Valley of Geysers in Kamchatka performed in 2010 and 2011 are discussed. The morphology of soils, their genesis, and their dependence on the degree of hydrothermal impact are characterized; the soil cover patterns developing in the valley are analyzed. On the basis of the materials provided by the Kronotskii Biospheric Reserve and original field data, the soil map of the valley has been developed. The maps of vegetation conditions, soil temperature at the depth of 15 cm, and slopes of the surface have been used for this purpose together with satellite imagery and field descriptions of reference soil profiles. The legend to the soil map includes nine soil units and seven units of parent materials and their textures. Soil names are given according to the classification developed by I.L. Goldfarb (2005) for the soils of hydrothermal fields. The designation of soil horizons follows the new Classification and Diagnostic System of Russian Soils (2004). It is suggested that a new horizon—a thermometamorphic horizon TRM—can be introduced into this system by analogy with other metamorphic (transformed in situ) horizons distinguished in this system. This horizon is typical of the soils partly or completely transformed by hydrothermal impacts.

Soil bioindicators as a usefull tools for land management and spatial planning processes: a case-study of prioritization of contaminated soil remediation

NASA Astrophysics Data System (ADS)

Grand, Cécile; Pauget, Benjamin; Villenave, Cécile; Le Guédard, Marina; Piron, Denis; Nau, Jean-François; Pérès, Guénola

2017-04-01

When setting up new land management, contaminated site remediation or soil use change are sometimes necessary to ensure soil quality and the restoration of the ecosystem services. The biological characterization of the soil can be used as complementary information to chemical data in order to better define the conditions for operating. Then, in the context of urban areas, elements on the soil biological quality can be taken into consideration to guide the land development. To assess this "biological state of soil health", some biological tools, called bioindicators, could provide comprehensive information to understand and predict the functioning of the soil ecosystem. In this context, a city of 200 thousand inhabitants has decided to integrate soil bioindicators in their soil diagnostic for their soil urban management. This city had to elaborate a spatial soil management in urban areas which presented soil contamination linked to a complex industrial history associated with bad uses of gardens not always safe for the environment. The project will lead to establish a Natural Urban Park (PNU) in order to develop recreational and leisure activities in a quality environment. In order to complete the knowledge of soil contamination and to assess the transfer of contaminants to the terrestrial ecosystem, a biological characterization of soils located in different areas was carried out using six bioindicators: bioindicators of accumulation which allowed to evaluate the transfers of soil contaminants towards the first 2 steps of a trophic chain (plants and soil fauna, e.g. snails), bioindicators of effects (Omega 3 index was used to assess the effects of soil contamination and to measure their impact on plants), bioindicators of soil functioning (measurement of microbial biomass, nematodes and earthworm community) ; the interest of these last bioindicators is that they also act on the functioning of ecosystems as on the dynamics of organic matter (mineralization) but also

A global spectral library to characterize the world's soil

USDA-ARS?s Scientific Manuscript database

Soil provides ecosystem services, supports human health and habitation, stores carbon and regulates emissions of greenhouse gases. Unprecedented pressures on soil from degradation and urbanization are threatening agro-ecological balances and food security. It is important that we learn more about so...

Effects of near soil surface characteristics on soil detachment by overland flow in a natural succession grassland

USDA-ARS?s Scientific Manuscript database

Vegetation restoration probably has great effects on the process of soil detachment. This study was conducted to investigate the effects of near soil surface characteristics on soil detachment by overland flow in a 7-year naturally restored grassland. Four treatments were designed to characterize th...

Soil microbial community successional patterns during forest ecosystem restoration.

PubMed

Banning, Natasha C; Gleeson, Deirdre B; Grigg, Andrew H; Grant, Carl D; Andersen, Gary L; Brodie, Eoin L; Murphy, D V

2011-09-01

Soil microbial community characterization is increasingly being used to determine the responses of soils to stress and disturbances and to assess ecosystem sustainability. However, there is little experimental evidence to indicate that predictable patterns in microbial community structure or composition occur during secondary succession or ecosystem restoration. This study utilized a chronosequence of developing jarrah (Eucalyptus marginata) forest ecosystems, rehabilitated after bauxite mining (up to 18 years old), to examine changes in soil bacterial and fungal community structures (by automated ribosomal intergenic spacer analysis [ARISA]) and changes in specific soil bacterial phyla by 16S rRNA gene microarray analysis. This study demonstrated that mining in these ecosystems significantly altered soil bacterial and fungal community structures. The hypothesis that the soil microbial community structures would become more similar to those of the surrounding nonmined forest with rehabilitation age was broadly supported by shifts in the bacterial but not the fungal community. Microarray analysis enabled the identification of clear successional trends in the bacterial community at the phylum level and supported the finding of an increase in similarity to nonmined forest soil with rehabilitation age. Changes in soil microbial community structure were significantly related to the size of the microbial biomass as well as numerous edaphic variables (including pH and C, N, and P nutrient concentrations). These findings suggest that soil bacterial community dynamics follow a pattern in developing ecosystems that may be predictable and can be conceptualized as providing an integrated assessment of numerous edaphic variables.

Metal-based nanoparticles in soil: fate, behavior, and effects on soil invertebrates.

PubMed

Tourinho, Paula S; van Gestel, Cornelis A M; Lofts, Stephen; Svendsen, Claus; Soares, Amadeu M V M; Loureiro, Susana

2012-08-01

Metal-based nanoparticles (NPs) (e.g., silver, zinc oxide, titanium dioxide, iron oxide) are being widely used in the nanotechnology industry. Because of the release of particles from NP-containing products, it is likely that NPs will enter the soil compartment, especially through land application of sewage sludge derived from wastewater treatment. This review presents an overview of the literature dealing with the fate and effects of metal-based NPs in soil. In the environment, the characteristics of NPs (e.g., size, shape, surface charge) and soil (e.g., pH, ionic strength, organic matter, and clay content) will affect physical and chemical processes, resulting in NP dissolution, agglomeration, and aggregation. The behavior of NPs in soil will control their mobility and their bioavailability to soil organisms. Consequently, exposure characterization in ecotoxicological studies should obtain as much information as possible about dissolution, agglomeration, and aggregation processes. Comparing existing studies is a challenging task, because no standards exist for toxicity tests with NPs. In many cases, the reporting of associated characterization data is sparse, or missing, making it impossible to interpret and explain observed differences in results among studies. Copyright © 2012 SETAC.

Characterization and forensic analysis of soil samples using laser-induced breakdown spectroscopy (LIBS).

PubMed

Jantzi, Sarah C; Almirall, José R

2011-07-01

A method for the quantitative elemental analysis of surface soil samples using laser-induced breakdown spectroscopy (LIBS) was developed and applied to the analysis of bulk soil samples for discrimination between specimens. The use of a 266 nm laser for LIBS analysis is reported for the first time in forensic soil analysis. Optimization of the LIBS method is discussed, and the results compared favorably to a laser ablation inductively coupled plasma mass spectrometry (LA-ICP-MS) method previously developed. Precision for both methods was <10% for most elements. LIBS limits of detection were <33 ppm and bias <40% for most elements. In a proof of principle study, the LIBS method successfully discriminated samples from two different sites in Dade County, FL. Analysis of variance, Tukey's post hoc test and Student's t test resulted in 100% discrimination with no type I or type II errors. Principal components analysis (PCA) resulted in clear groupings of the two sites. A correct classification rate of 99.4% was obtained with linear discriminant analysis using leave-one-out validation. Similar results were obtained when the same samples were analyzed by LA-ICP-MS, showing that LIBS can provide similar information to LA-ICP-MS. In a forensic sampling/spatial heterogeneity study, the variation between sites, between sub-plots, between samples and within samples was examined on three similar Dade sites. The closer the sampling locations, the closer the grouping on a PCA plot and the higher the misclassification rate. These results underscore the importance of careful sampling for geographic site characterization.

Thermal Conductivity Prediction of Soil in Complex Plant Soil System using Artificial Neural Networks

NASA Astrophysics Data System (ADS)

Wardani, A. K.; Purqon, A.

2016-08-01

Thermal conductivity is one of thermal properties of soil in seed germination and plants growth. Different soil types have different thermal conductivity. One of soft-computing promising method to predict thermal conductivity of soil types is Artificial Neural Network (ANN). In this study, we estimate the thermal conductivity of soil prediction in a soil-plant complex systems using ANN. With a feed-forward multilayer trained with back-propagation with 4, 10 and 1 on the input, hidden and output layers respectively. Our input are heating time, temperature and thermal resistance with thermal conductivity of soil as a target. ANN prediction demonstrates a good agreement with Mean Squared Error-testing (MSEte) of 9.56 x 10-7 for soils with green beans and those of bare soils is 7.00 × 10-7 respectively Green beans grow only on black-clay soil with a thermal conductivity of 0.7 W/m K with a sufficient water content. Our results demonstrate that temperature, moisture content, colour, texture and structure of soil are greatly affect to the thermal conductivity of soil in seed germination and plant growth. In future, it is potentially applied to estimate more complex compositions of plant-soil systems.

Improving Estimations of Spatial Distribution of Soil Respiration Using the Bayesian Maximum Entropy Algorithm and Soil Temperature as Auxiliary Data.

PubMed

Hu, Junguo; Zhou, Jian; Zhou, Guomo; Luo, Yiqi; Xu, Xiaojun; Li, Pingheng; Liang, Junyi

2016-01-01

Soil respiration inherently shows strong spatial variability. It is difficult to obtain an accurate characterization of soil respiration with an insufficient number of monitoring points. However, it is expensive and cumbersome to deploy many sensors. To solve this problem, we proposed employing the Bayesian Maximum Entropy (BME) algorithm, using soil temperature as auxiliary information, to study the spatial distribution of soil respiration. The BME algorithm used the soft data (auxiliary information) effectively to improve the estimation accuracy of the spatiotemporal distribution of soil respiration. Based on the functional relationship between soil temperature and soil respiration, the BME algorithm satisfactorily integrated soil temperature data into said spatial distribution. As a means of comparison, we also applied the Ordinary Kriging (OK) and Co-Kriging (Co-OK) methods. The results indicated that the root mean squared errors (RMSEs) and absolute values of bias for both Day 1 and Day 2 were the lowest for the BME method, thus demonstrating its higher estimation accuracy. Further, we compared the performance of the BME algorithm coupled with auxiliary information, namely soil temperature data, and the OK method without auxiliary information in the same study area for 9, 21, and 37 sampled points. The results showed that the RMSEs for the BME algorithm (0.972 and 1.193) were less than those for the OK method (1.146 and 1.539) when the number of sampled points was 9 and 37, respectively. This indicates that the former method using auxiliary information could reduce the required number of sampling points for studying spatial distribution of soil respiration. Thus, the BME algorithm, coupled with soil temperature data, can not only improve the accuracy of soil respiration spatial interpolation but can also reduce the number of sampling points.

Improving Estimations of Spatial Distribution of Soil Respiration Using the Bayesian Maximum Entropy Algorithm and Soil Temperature as Auxiliary Data

PubMed Central

Hu, Junguo; Zhou, Jian; Zhou, Guomo; Luo, Yiqi; Xu, Xiaojun; Li, Pingheng; Liang, Junyi

2016-01-01

Soil respiration inherently shows strong spatial variability. It is difficult to obtain an accurate characterization of soil respiration with an insufficient number of monitoring points. However, it is expensive and cumbersome to deploy many sensors. To solve this problem, we proposed employing the Bayesian Maximum Entropy (BME) algorithm, using soil temperature as auxiliary information, to study the spatial distribution of soil respiration. The BME algorithm used the soft data (auxiliary information) effectively to improve the estimation accuracy of the spatiotemporal distribution of soil respiration. Based on the functional relationship between soil temperature and soil respiration, the BME algorithm satisfactorily integrated soil temperature data into said spatial distribution. As a means of comparison, we also applied the Ordinary Kriging (OK) and Co-Kriging (Co-OK) methods. The results indicated that the root mean squared errors (RMSEs) and absolute values of bias for both Day 1 and Day 2 were the lowest for the BME method, thus demonstrating its higher estimation accuracy. Further, we compared the performance of the BME algorithm coupled with auxiliary information, namely soil temperature data, and the OK method without auxiliary information in the same study area for 9, 21, and 37 sampled points. The results showed that the RMSEs for the BME algorithm (0.972 and 1.193) were less than those for the OK method (1.146 and 1.539) when the number of sampled points was 9 and 37, respectively. This indicates that the former method using auxiliary information could reduce the required number of sampling points for studying spatial distribution of soil respiration. Thus, the BME algorithm, coupled with soil temperature data, can not only improve the accuracy of soil respiration spatial interpolation but can also reduce the number of sampling points. PMID:26807579

Identification and characterization of natural pipe systems in forested tropical soils

NASA Astrophysics Data System (ADS)

Bovi, Renata Cristina; Moreira, Cesar Augusto; Stucchi Boschi, Raquel; Cooper, Miguel

2017-04-01

Erosive processes on soil surface have been well studied and comprehended by several researchers, however little is known about subsurface erosive processes (piping). Piping is a type of subsurface erosion caused by water flowing in the subsurface and is still considered one of the most difficult erosive processes to be studied. Several processes have been considered as resposible for subsurface erosion and their interaction is complex and difficult to be studied separately. Surface investigations on their own may underestimate the erosion processes, due to the possible occurrence of subsurface processes that are not yet exposed on the surface. The network of subsurface processes should also be understood to better control erosion. Conservation practices that focus on water runoff control may be inefficient if the subsurface flow is not considered. In this study, we aimed to identify and characterize subsurface cavities in the field, as well as understand the network of these cavities, by using geophysical methods (electrical tomography). The study area is situated at the Experimental Station of Tupi, state of São Paulo, Brazil. The soil of the area was classified as Hapludults. The area presents several erosive features, ranging from laminar to permanent gullies and subsurface erosions. The geophysical equipment used was the Terrameter LS resistivity meter, manufactured by ABEM Instruments. The method of electrical tomography was efficient to detect collapsed and non-collapsed pipes. The results presented valuable information to detect areas of risk.

Characterization of metal-resistant plant-growth promoting Bacillus weihenstephanensis isolated from serpentine soil in Portugal.

PubMed

Rajkumar, Mani; Ma, Ying; Freitas, Helena

2008-12-01

A metal-resistant bacterial strain SM3 isolated from a serpentine soil in the north-east of Portugal was characterized as Bacillus weihenstephanensis based on the morphological and biochemical characteristics and on the comparative analysis of the partial 16S ribosomal DNA sequence. Bacillus weihenstephanensis SM3 showed a high degree of resistance to nickel (1500 mg l(-1)), copper (500 mg l(-1)) and zinc (700 mg l(-1)) and also to antibiotics (ampicillin, penicillin, kanamycin and streptomycin). Strain SM3 has also exhibited the capability of solubilizing phosphate and producing indole-3-acetic acid (IAA) both in the absence and in the presence of metals (Ni, Cu and Zn). A pot experiment was conducted to elucidate the effects of strain SM3 on plant growth and uptake of Ni, Cu or Zn by Helianthus annuus. Inoculation with strain SM3 increased the shoot and root biomass of H. annuus grown in both non-contaminated and contaminated soil. Furthermore, strain SM3 increased the accumulation of Cu and Zn in the root and shoot systems. A batch experiment was also conducted to assess the metal mobilization potential of strain SM3 in soil. Inoculation with this strain increased the concentrations of water soluble Ni, Cu and Zn in soil. Metal solubilization by this bacterial strain may be an important process to promote the uptake of heavy metals by plants. This study elucidates the multifarious role of strain SM3 in plant growth promotion and its metal mobilizing potential.

ISRU Soil Mechanics Vacuum Facility: Soil Bin Preparation and Simulant Strength Characterization

NASA Technical Reports Server (NTRS)

Kleinhenz, Julie; Wilkinson, Allen

2012-01-01

Testing in relevant environments is key to exploration mission hardware development. This is true on both the component level (in early development) and system level (in late development stages). During ISRU missions the hardware will interface with the soil (digging, roving, etc) in a vacuum environment. A relevant test environment will therefore involve a vacuum chamber with a controlled, conditioned simulant bed. However, in earth-based granular media, such as lunar soil simulant, gases trapped within the material pore structures and water adsorbed to all particle surfaces will release when exposed to vacuum. Early vacuum testing has shown that this gas release can occur violently, which loosens and weakens the simulant, altering the consolidation state. The Vacuum Facility #13, a mid-size chamber (3.66m tall, 1.5m inner diameter) at the NASA Glenn Research Center has been modified to create a soil mechanics test facility. A 0.64m deep by 0.914m square metric ton bed of lunar simulant was placed under vacuum using a variety of pumping techniques. Both GRC-3 and LHT-3M simulant types have been used. An electric cone penetrometer was used to measure simulant strength properties at vacuum including: cohesion, friction angle, bulk density and shear modulus. Simulant disruptions, caused by off gassing, affected the strength properties, but could be mitigated by reducing pump rate. No disruptions were observed at pressures below 2.5Torr, regardless of the pump rate. However, slow off gassing of the soil lead to long test times, a full week, to reach 10-5Torr. This work highlights the need for robotic machine-simulant hardware and operations in vacuum to expeditiously perform (sub-)systems tests.

Helping People Understand Soils - Perspectives from the US National Cooperative Soil Survey

NASA Astrophysics Data System (ADS)

Reich, Paul; Cheever, Tammy; Greene, Linda; Southard, Susan; Levin, Maxine; Lindbo, David L.; Monger, Curtis

2017-04-01

Throughout the history of the US National Cooperative Soil Survey (NCSS), soil science education has been a part of the mission to better understand one of our most precious natural resources: the Soil. The poster will highlight the many products and programs related to soils that USDA NRCS (soils.usda.gov) has developed over the years for K-12 and college/professional education. NRCS scientific publications covering topics on soil properties, soil classification, soil health and soil quality have become an important part of the university soil science curriculum. Classroom lesson plans and grade appropriate materials help K-12 teachers introduce soil concepts to students and include detailed instructions and materials for classroom demonstrations of soil properties. A Handbook for Collegiate Soils Contests support universities that conduct Collegiate Soil Judging contests.

Nutrient and pollutant metals within earthworm residues are immobilized in soil during decomposition

PubMed Central

Richardson, J.B; Renock, D.J; Görres, J.H; Jackson, B.P; Webb, S.M; Friedland, A.J

2016-01-01

Earthworms are known to bioaccumulate metals, making them a potential vector for metal transport in soils. However, the fate of metals within soil upon death of earthworms has not been characterized. We compared the fate of nutrient (Ca, Mg, Mn) and potentially toxic (Cu, Zn, Pb) metals during decomposition of Amynthas agrestis and Lumbricus rubellus in soil columns. Cumulative leachate pools, exchangeable pools (0.1 M KCl + 0.01 M acetic acid extracted), and stable pools (16 M HNO3 + 12 M HCl extracted) were quantified in the soil columns after 7, 21, and 60 days of decomposition. Soil columns containing A. agrestis and L. rubellus had significantly higher cumulative leachate pools of Ca, Mn, Cu, and Pb than Control soil columns. Exchangeable and stable pools of Cu, Pb, and Zn were greater for A. agrestis and L. rubellus soil columns than Control soil columns. However, we estimated that > 98 % of metals from earthworm residues were immobilized in the soil in an exchangeable or stable form over the 60 days using a mass balance approach. Micro-XRF images of longitudinal thin sections of soil columns after 60 days containing A. agrestis confirm metals immobilization in earthworm residues. Our research demonstrates that nutrient and toxic metals are stabilized in soil within earthworm residues. PMID:28163331

Characterization of Cultures Enriched from Acidic Polycyclic Aromatic Hydrocarbon-Contaminated Soil for Growth on Pyrene at Low pH▿

PubMed Central

Uyttebroek, Maarten; Vermeir, Steven; Wattiau, Pierre; Ryngaert, Annemie; Springael, Dirk

2007-01-01

Two polycyclic aromatic hydrocarbon (PAH)-contaminated soils of pH 2 were successfully used as inoculum to enrich cultures growing on phenanthrene and pyrene at different pHs, including pH 3. Selected pyrene-utilizing cultures obtained at pH 3, pH 5, and pH 7 were further characterized. All showed rapid [14C]pyrene mineralization at pH 3 and pH 5 and grew on pyrene at pH values ranging from 2 to 6. Eubacterial and mycobacterial 16S rRNA gene denaturing gradient gel electrophoresis fingerprinting and sequencing indicated that the cultures were dominated by a single bacterium closely related to Mycobacterium montefiorense, belonging to the slow-growing Mycobacterium sp. In contrast, a culture enriched on pyrene at pH 7 from a slightly alkaline soil sampled at the same site was dominated by Pseudomonas putida and a fast-growing Mycobacterium sp. The M. montefiorense-related species dominating the pyrene-utilizing cultures enriched from the acidic soils was also the dominant Mycobacterium species in the acidic soils. Our data indicate that a slow-growing Mycobacterium species is involved in PAH degradation in that culture and show that bacteria able to degrade high-molecular-weight PAHs at low pH are present in acidic PAH-contaminated soil. PMID:17369339

Characterization of soil phosphorus in a fire-affected forest Cambisol by chemical extractions and (31)P-NMR spectroscopy analysis.

PubMed

Turrion, María-Belén; Lafuente, Francisco; Aroca, María-José; López, Olga; Mulas, Rafael; Ruipérez, Cesar

2010-07-15

This study was conducted to investigate the long-term effects of fire on soil phosphorus (P) and to determine the efficiency of different procedures in extracting soil P forms. Different P forms were determined: labile forms (Olsen-P, Bray-P, and P extracted by anion exchange membranes: AEM-P); moderately labile inorganic and organic P, obtained by NaOH-EDTA extraction after removing the AEM-P fraction; and total organic and inorganic soil P. (31)P-NMR spectroscopy was used to characterize the structure of alkali-soluble P forms (orthophosphate, monoester, pyrophosphate, and DNA). The studied area was a Pinus pinaster forest located at Arenas de San Pedro (southern Avila, Spain). The soils were Dystric Cambisols over granites. Soil samples were collected at 0-2 cm, 2-5 cm, and 10-15 cm depths, two years after a fire in the burned area and in an adjacent unburned forest area. Fire increased the total N, organic C, total P, and organic and inorganic P content in the surface soil layer. In burned soil, the P extracted by the sequential procedure (AEM and NaOH+EDTA) was about 95% of the total P. Bray extraction revealed a fire-induced increase in the sorption surfaces. Analysis by chemical methods overestimated the organic P fraction in the EDTA-NaOH extract in comparison with the determination by ignition procedure. This overestimation was more important in the burned than unburned soil samples, probably due to humification promoted by burning, which increased P sorption by soil particles. The fire-induced changes on the structure of alkali-soluble P were an increase in orthophosphate-P and a decrease in monoester-P and DNA-P. Copyright 2010 Elsevier B.V. All rights reserved.

Surface Wave Characterization of New Orleans Levee Soil Foundations

NASA Astrophysics Data System (ADS)

Delisser, T. A.; Lorenzo, J. M.; Hayashi, K.; Craig, M. S.

2016-12-01

Standard geotechnical tests such as the drilling of boreholes and cone penetration tests are able to assess soil stability at point locations vertically but lack lateral resolution in a complex sedimentary environment, such as the Louisiana Coastal system. Multi-Channel Analysis of Surface Waves (MASW) can complement geotechnical tests to improve certainty in resolving lateral features when predicting soil types in the near surface of levee soil foundations. A portion of the Inner-Harbor Navigation Canal levee wall that intersects the 9th Ward of New Orleans failed in the aftermath of Hurricane Katrina in 2005. Failures were attributed to floodwaters overtopping the levee wall and eroding its base. Geotechnical and geological data from test points can be used to calibrate continuous shear strength estimates derived from MASW. It is important to understand soil stability and strength to prevent future failures in New Orleans levee foundation soils. MASW analyzes the dispersive property of Rayleigh waves to develop shear wave velocity profiles for the near surface. Data are acquired using a seismic land streamer containing 4.5-Hz vertical-component geophones and a sledgehammer as the source. We plot and contour 18 inverted models of the interpreted fundamental mode and generate a 200-m-long profile to help us (1) better understand the characteristics of levee foundation soils as well as (2) improve existing geological cross-sections to help in future planning and maintenance of the levees. In comparison to the prior geological models, we find unexpected large vertical and horizontal shear-velocity gradients, as well as relatively low shear strengths throughout the seismic profile.

Soil Organic Matter Stability and Soil Carbon Storage with Changes in Land Use Intensity in Uganda

NASA Astrophysics Data System (ADS)

Tiemann, L. K.; Grandy, S.; Hartter, J.

2014-12-01

As the foundation of soil fertility, soil organic matter (SOM) formation and break-down is a critical factor of agroecosystem sustainability. In tropical systems where soils are quickly weathered, the link between SOM and soil fertility is particularly strong; however, the mechanisms controlling the stabilization and destabilization of SOM are not well characterized in tropical soils. In western Uganda, we collected soil samples under different levels of land use intensity including maize fields, banana plantations and inside an un-cultivated native tropical forest, Kibale National Park (KNP). To better understand the link between land use intensity and SOM stability we measured total soil C and N, and respiration rates during a 369 d soil incubation. In addition, we separated soils into particle size fractions, and mineral adsorbed SOM in the silt (2-50 μm ) and clay (< 2 μm) fractions was dissociated, purified and chemically characterized via pyrolysis-GC/MS. Cultivated soil C and N have declined by 22 and 48%, respectively, in comparison to uncultivated KNP soils. Incubation data indicate that over the last decade, relatively accessible and labile soil organic carbon (SOC) pools have been depleted by 55-59% in cultivated soils. As a result of this depletion, the chemical composition of SOM has been altered such that clay and silt associated SOM differed significantly between agricultural fields and KNP. In particular, nitrogen containing compounds were in lower abundance in agricultural compared to KNP soils. This suggests that N depletion due to agriculture has advanced to pools of mineral associated organic N that are typically protected from break-down. In areas where land use intensity is relatively greater, increases in polysaccharides and lipids in maize fields compared to KNP indicate increases in microbial residues and decomposition by-products as microbes mine SOM for organic N. Chemical characterization of post-incubation SOM will help us better

Demonstration of the Fenton Reaction

ERIC Educational Resources Information Center

Luehrs, Dean C.; Roher, Alex E.

2007-01-01

The study demonstrates the Fenton reaction, which is carried out using the Fenton reagent that is used for groundwater and soil remediation. The Fenton reaction can be implicated in DNA damage, Alzheimer's disease, cardiovascular disease and ageing in general.

Characterization of successional changes in bacterial community composition during bioremediation of used motor oil-contaminated soil in a boreal climate.

PubMed

Yan, Lijuan; Sinkko, Hanna; Penttinen, Petri; Lindström, Kristina

2016-01-15

The widespread use of motor oil makes it a notable risk factor to cause scattered contamination in soil. The monitoring of microbial community dynamics can serve as a comprehensive tool to assess the ecological impact of contaminants and their disappearance in the ecosystem. Hence, a field study was conducted to monitor the ecological impact of used motor oil under different perennial cropping systems (fodder galega, brome grass, galega-brome grass mixture and bare fallow) in a boreal climate zone. Length heterogeneity PCR characterized a successional pattern in bacterial community following oil contamination over a four-year bioremediation period. Soil pH and electrical conductivity were associated with the shifts in bacterial community composition. Crops had no detectable effect on bacterial community composition or complexity. However, the legume fodder galega increased soil microbial biomass, expressed as soil total DNA. Oil contamination induced an abrupt change in bacterial community composition at the early stage, yet the effect did not last as long as the oil in soil. The successional variation in bacterial community composition can serve as a sensitive ecological indicator of oil contamination and remediation in situ. Copyright © 2015 Elsevier B.V. All rights reserved.

Characterization of adsorption and degradation of diuron in carbonatic and noncarbonatic soils.

PubMed

Kasozi, Gabriel N; Nkedi-Kizza, Peter; Agyin-Birikorang, Sampson; Zimmerman, Andrew R

2010-01-27

The adsorption and degradation of the pesticide diuron in carbonatic and noncarbonatic soils were investigated to better understand the fate and transport of diuron in the environment. Batch adsorption experiments yielded isotherms that were well-described by the linear model. Adsorption coefficients normalized to soil organic carbon content (K(oc)) were lowest for carbonatic soils, averaging 259 +/- 48 (95% CI), 558 +/- 109, 973 +/- 156, and 2090 +/- 1054 for carbonatic soils, Histosols, Oxisols, and Spodosols, respectively. In addition, marl-carbonatic soils had much lower K(oc) values (197 +/- 27) than nonmarl-carbonatic soils. Diuron degradation data fit a first-order reaction kinetics model, yielding half-lives in soils ranging from 40 to 267 days. There was no significant difference between the average diuron degradation rate coefficients of each of the soil groups studied. Given the low adsorption capacity of carbonatic soils, it may be advisable to lower herbicide application rates in agricultural regions with carbonatic soils such as southern Florida to protect aquatic ecosystems and water quality.

Hyper-temporal remote sensing for digital soil mapping: Characterizing soil-vegetation response to climatic variability

USDA-ARS?s Scientific Manuscript database

Indices derived from remotely-sensed imagery are commonly used to predict soil properties with digital soil mapping (DSM) techniques. The use of images from single dates or a small number of dates is most common for DSM; however, selection of the appropriate images is complicated by temporal variabi...

Controlled release formulations of Atrazine and Mesotrione: characterization and sorption on soils

NASA Astrophysics Data System (ADS)

Pinheiro Dick, D.; Gomes de Ávila, L.; Benvenuti Leite, S.; Raffin Pohlmann, A.

2009-04-01

Atrazine is a widely used herbicide on corn and sugar cane plantations, which, along with soybeans, are the most productive crops in Brazil and are responsible for 36.5% of the annual national consumption of herbicides. Mesotrione is a new herbicide registered in the last years used for controlling weeds in corn plantations as a tentative substitution for atrazine. After its application in the field, reactions between the herbicide and chemical groups from the soil matrix surface occur, and this complexed form remains in the soil, representing a potential source for environmental contamination and also affecting its agronomic efficiency. Therefore, the application of herbicides associated to carrier systems may represent an alternative to mitigate the environmental impact caused by their intense usage, considering that the interaction between the soil matrix and the xenobiotic is reduced, and thus, diminishes the recommended dosis and reduces the environmental pollution. The objectives of this study are to evaluate the chemical and morphological characteristics of controlled release formulations of atrazine (ATZ) and of mesotrione (MES) and to investigate their sorptive behavior in three representative Brazilian soils. To assess the feasibility of using these associated systems, four formulations (SGATZ) containing different concentrations of atrazine and four formulations (SGMES) containing different levels of mesotrione (MES) were synthesized by the sol-gel method (SG), using tetraetil-ortho-silicate as precursor and NaF as catalyst. The formulations were characterized by elemental analysis, adsorption and desorption isotherms of nitrogen, thermal analysis (DSC), scanning electron microscopy (SEM) and infrared spectroscopy (FTIR). For comparison, samples of pure xerogel (SG), commercial MES (Callisto-Syngenta), pure ATZ (99% of active principle, Milênia), granulated ATZ (Gesaprim GrDA Syngenta) and dried commercial ATZ (Nortox 500 SC) were analyzed. The

[Stabilization of Cadmium Contaminated Soils by Ferric Ion Modified Attapulgite (Fe/ATP)--Characterizations and Stabilization Mechanism].

PubMed

Rong, Yang; Li, Rong-bo; Zhou, Yong-li; Chen, Jing; Wang, Lin-ling; Lu, Xiao-hua

2015-08-01

Ferric ion modified attapulgite (Fe/ATP) was prepared by impregnation and its structure and morphology were characterized. The toxicity characteristic leaching procedure (TCLP) was used to evaluate the effect of Cadmium( Cd) stabilization in soil with the addition of attapulgite (ATP) and Fe/ATP. The stabilization mechanism of Cd was further elucidated by comparing the morphologies and structure of ATP and Fe/ATP before and after Cd adsorption. Fe/ATP exhibited much better adsorption capacity than ATP, suggesting different adsorption mechanisms occurred between ATP and Fe/ATP. The leaching concentrations of Cd in soil decreased by 45% and 91% respectively, with the addition of wt. 20% ATP and Fe/ATP. The former was attributed to the interaction between Cd2 and --OH groups by chemical binding to form inner-sphere complexes in ATP and the attachment between Cd2+ and the defect sites in ATP framework. Whereas Cd stabilization with Fe/ATP was resulted from the fact that the active centers (--OH bonds or O- sites) on ATP could react with Fe3+ giving Fe--O--Cd-- bridges, which helped stabilize Cd in surface soil. What'more, the ferric oxides and metal hydroxides on the surface of ATP could interact with Cd, probably by the formation of cadmium ferrite. In conclusion, Fe/ATP, which can be easily prepared, holds promise as a potential low-cost and environmental friendly stabilizing agent for remediation of soil contaminated with heavy metals.

Demonstration to characterize watershed runoff potential by microwave techniques

NASA Technical Reports Server (NTRS)

Blanchard, B. J.

1977-01-01

Characteristics such as storage capacity of the soil, volume of storage in vegetative matter, and volume of storage available in local depressions are expressed in empirical watershed runoff equations as one or more coefficients. Conventional techniques for estimating coefficients representing the spatial distribution of these characteristics over a watershed drainage area are subjective and produce significant errors. Characteristics of the wear surface are described as a single coefficient called the curve number.

GIS-based multicriteria overlay analysis in soil-suitability evaluation for cotton (Gossypium spp.): A case study in the black soil region of Central India

NASA Astrophysics Data System (ADS)

Walke, N.; Obi Reddy, G. P.; Maji, A. K.; Thayalan, S.

2012-04-01

In this study an attempt was made to characterize the soils of the Ringanbodi watershed, Nagpur district, Maharashtra, Central India, for soil-suitability evaluation for cotton using geographic information system (GIS)-based multicriteria overlay analysis techniques. The study shows that 8 soil series and 16 soil series associations in the study area and soils were classified into three orders, i.e., Entisol, Inceptisol, and Vertisol. The analysis reveals that the soil associations E-F, F-G, G-H, and H-G are "moderately suitable" (S2), D-E are "marginally to moderately suitable," and C-D are marginally (S3) suitable. However, soils B-C are "not suitable" to "marginally suitable" (N2-S3) and A-B are "unsuitable" (N2) for cultivation of cotton. The area analysis shows that for a cotton crop an area about 966.7 ha (49.1%) of TGA is moderately suitable and classified as S2. An area about 469.9 ha (23.8%) of TGA is marginal to moderately suitable (S3-S2). The marginally suitable soils for cotton are classified as S3 and cover an area about 35.2 ha (1.8%) of TGA. However, a 172.3 ha (8.7%) area is not suitable (N2) to marginally suitable (S3) and a 326.9 (16.6%) area is not suitable (N2) for cotton because of uncorrectable factors like soil depth, slope, etc. The study demonstrated that GIS-based multicriteria overlay analysis of soil thematic parameters will be of immense help in soil-suitability evaluation for cotton.

SH-wave refraction/reflection and site characterization

USGS Publications Warehouse

Wang, Z.; Street, R.L.; Woolery, E.W.; Madin, I.P.

2000-01-01

Traditionally, nonintrusive techniques used to characterize soils have been based on P-wave refraction/reflection methods. However, near-surface unconsolidated soils are oftentimes water-saturated, and when groundwater is present at a site, the velocity of the P-waves is more related to the compressibility of the pore water than to the matrix of the unconsolidated soils. Conversely, SH-waves are directly relatable to the soil matrix. This makes SH-wave refraction/reflection methods effective in site characterizations where groundwater is present. SH-wave methods have been used extensively in site characterization and subsurface imaging for earthquake hazard assessments in the central United States and western Oregon. Comparison of SH-wave investigations with geotechnical investigations shows that SH-wave refraction/reflection techniques are viable and cost-effective for engineering site characterization.

Characterization of trichloroethylene adsorption onto waste biocover soil in the presence of landfill gas.

PubMed

He, Ruo; Su, Yao; Kong, Jiaoyan

2015-09-15

Waste biocover soils (WBS) have been demonstrated to have great potential in mitigating trichloroethylene (TCE) emission from landfills, due to the relatively high TCE-degrading capacity. In this study, the characteristics of TCE adsorption on WBS in the presence of the major landfill gas components (i.e., CH4 and CO2) were investigated in soil microcosms. The adsorption isotherm of TCE onto WBS was fitted well with linear model within the TCE concentrations of 7000 ppmv. The adsorption capacity of TCE onto WBS was affected by temperature, soil moisture content and particle size, of which, temperature was the dominant factor. The adsorption capacity of TCE onto the experimental materials increased with the increasing organic matter content. A significantly positive correlation was observed between the adsorption capacity of TCE and the organic matter content of experimental materials that had relatively higher organic content (r = 0.988, P = 0.044). To better understand WBS application in practice, response surface methodology was developed to predict TCE adsorption capacity and emissions through WBS in different landfills in China. These results indicated that WBS had high adsorption capacity of TCE in LFG and temperature should be paid more attention to manipulate WBS to reduce TCE emissions from landfills. Copyright © 2015 Elsevier B.V. All rights reserved.

Ecotoxicological assessment of metal-polluted urban soils using bioassays with three soil invertebrates.

PubMed

Santorufo, Lucia; Van Gestel, Cornelis A M; Maisto, Giulia

2012-07-01

This study aimed at assessing the quality of urban soils by integrating chemical and ecotoxicological approaches. Soils from five sites in downtown Naples, Italy, were sampled and characterized for physical-chemical properties and total and water-extractable metal concentrations. Bioassays with Eisenia andrei, Enchytraeus crypticus and Folsomia candida were performed to assess toxicity of the soils, using survival, reproduction and growth as the endpoints. Metal bioaccumulation in the animals was also measured. The properties and metal concentrations of the soils strongly differed. Metal bioaccumulation was related with total metal concentrations in soil and was highest in E. crypticus, which was more sensitive than E. andrei and F. candida. Responses of the three species to the investigated soils seemed due to both metal contamination and soil properties. Copyright © 2012 Elsevier Ltd. All rights reserved.

Effect of soil texture on the microwave emission from soils

NASA Technical Reports Server (NTRS)

Schmugge, T. J.

1980-01-01

The intensity brightness temperature of the microwave emission from the soil is determined primarily by its dielectric properties. The large difference between the dielectric constant of water and that of dry soil produces a strong dependence of the soil's dielectric constant on its moisture content. This dependence is effected by the texture of the soil because the water molecules close to the particle surface are tightly bound and do not contribute significantly to the dielectric properties. Since this surface area is a function of the particle size distribution (soil texture), being larger for clay soils with small particles, and smaller for sandy soils with larger particles; the dielectric properties will depend on soil texture. Laboratory measurements of the dielectric constant for soils are summarized. The dependence of the microwave emission on texture is demonstrated by measurements of brightness temperature from an aircraft platform for a wide range of soil textures. It is concluded that the effect of soil texture differences on the observed values can be normalized by expressing the soil moisture values as a percent field capacity for the soil.

DEMONSTRATION AND QUALITY ASSURANCE PROJECT ...

EPA Pesticide Factsheets

A demonstration of field portable/mobile technologies for measuring trace elements in soil and sediments was conducted under the U.S. Environmental Protection Agency Superfund Innovative Technology Evaluation (SITE) Program. The demonstration took place from January 24 to 28, 2005, at the Kennedy Athletic, Recreational and Social Park at Kennedy Space Center on Merritt Island, Florida. The purpose of the demonstration was to verify the performance of various instruments that employ X-ray fluorescence (XRF) measurement technologies for the determination of 13 toxic elements in a variety of soil and sediment samples. Instruments from the technology developers listed below were demonstrated. o Innov-X Systems, Inc.o NITON LLC (2 instruments ) o Oxford Instruments Portable Division (formerly Metorex, Inc.) .Oxford Instruments Analytical .Rigaku, Inc.o RONTEC USA Inc.o Xcalibur XRF Services Inc. (Division of Elvatech Ltd. ) This demonstration plan describes the procedures that will be used to verify the performance and cost of the XRF instruments provided by these technology developers. The plan incorporates the quality assurance and quality control elements needed to generate data of sufficient quality to perform this verification. A separate innovative technology verification report (ITVR) will be prepared for each instrument. The objective of this program is to promote the acceptance and use of innovative field technologies by providing well-documented perfor

Evaluation of Electromagnetic Induction to Characterize and Map Sodium-Affected Soils in the Northern Great Plains of the United States

NASA Astrophysics Data System (ADS)

Brevik, E. C.; Heilig, J.; Kempenich, J.; Doolittle, J.; Ulmer, M.

2012-04-01

Sodium-affected soils (SAS) cover over 4 million hectares in the Northern Great Plains of the United States. Improving the classification, interpretation, and mapping of SAS is a major goal of the United States Department of Agriculture-Natural Resource Conservation Service (USDA-NRCS) as Northern Great Plains soil surveys are updated. Apparent electrical conductivity (ECa) as measured with ground conductivity meters has shown promise for mapping SAS, however, this use of this geophysical tool needs additional evaluation. This study used an EM-38 MK2-2 meter (Geonics Limited, Mississauga, Ontario), a Trimble AgGPS 114 L-band DGPS (Trimble, Sunnyvale, CA) and the RTmap38MK2 program (Geomar Software, Inc., Mississauga, Ontario) on an Allegro CX field computer (Juniper Systems, North Logan, UT) to collect, observe, and interpret ECa data in the field. The ECa map generated on-site was then used to guide collection of soil samples for soil characterization and to evaluate the influence of soil properties in SAS on ECa as measured with the EM-38MK2-2. Stochastic models contained in the ESAP software package were used to estimate the SAR and salinity levels from the measured ECa data in 30 cm depth intervals to a depth of 90 cm and for the bulk soil (0 to 90 cm). This technique showed promise, with meaningful spatial patterns apparent in the ECa data. However, many of the stochastic models used for salinity and SAR for individual depth intervals and for the bulk soil had low R-squared values. At both sites, significant variability in soil clay and water contents along with a small number of soil samples taken to calibrate the ECa values to soil properties likely contributed to these low R-squared values.

Partial Characterization of Biosurfactant from Lactobacillus pentosus and Comparison with Sodium Dodecyl Sulphate for the Bioremediation of Hydrocarbon Contaminated Soil

PubMed Central

Moldes, A. B.; Paradelo, R.; Vecino, X.; Cruz, J. M.; Gudiña, E.; Rodrigues, L.; Teixeira, J. A.; Domínguez, J. M.; Barral, M. T.

2013-01-01

The capability of a cell bound biosurfactant produced by Lactobacillus pentosus, to accelerate the bioremediation of a hydrocarbon-contaminated soil, was compared with a synthetic anionic surfactant (sodium dodecyl sulphate SDS-). The biosurfactant produced by the bacteria was analyzed by Fourier transform infrared spectroscopy (FTIR) that clearly indicates the presence of OH and NH groups, C=O stretching of carbonyl groups and NH nebding (peptide linkage), as well as CH2–CH3 and C–O stretching, with similar FTIR spectra than other biosurfactants obtained from lactic acid bacteria. After the characterization of biosurfactant by FTIR, soil contaminated with 7,000 mg Kg−1 of octane was treated with biosurfactant from L. pentosus or SDS. Treatment of soil for 15 days with the biosurfactant produced by L. pentosus led to a 65.1% reduction in the hydrocarbon concentration, whereas SDS reduced the octane concentration to 37.2% compared with a 2.2% reduction in the soil contaminated with octane in absence of biosurfactant used as control. Besides, after 30 days of incubation soil with SDS or biosurfactant gave percentages of bioremediation around 90% in both cases. Thus, it can be concluded that biosurfactant produced by L. pentosus accelerates the bioremediation of octane-contaminated soil by improving the solubilisation of octane in the water phase of soil, achieving even better results than those reached with SDS after 15-day treatment. PMID:23691515

Amplicon-Based Sequencing of Soil Fungi from Wood Preservative Test Sites

PubMed Central

Kirker, Grant T.; Bishell, Amy B.; Jusino, Michelle A.; Palmer, Jonathan M.; Hickey, William J.; Lindner, Daniel L.

2017-01-01

Soil samples were collected from field sites in two AWPA (American Wood Protection Association) wood decay hazard zones in North America. Two field plots at each site were exposed to differing preservative chemistries via in-ground installations of treated wood stakes for approximately 50 years. The purpose of this study is to characterize soil fungal species and to determine if long term exposure to various wood preservatives impacts soil fungal community composition. Soil fungal communities were compared using amplicon-based DNA sequencing of the internal transcribed spacer 1 (ITS1) region of the rDNA array. Data show that soil fungal community composition differs significantly between the two sites and that long-term exposure to different preservative chemistries is correlated with different species composition of soil fungi. However, chemical analyses using ICP-OES found levels of select residual preservative actives (copper, chromium and arsenic) to be similar to naturally occurring levels in unexposed areas. A list of indicator species was compiled for each treatment-site combination; functional guild analyses indicate that long-term exposure to wood preservatives may have both detrimental and stimulatory effects on soil fungal species composition. Fungi with demonstrated capacity to degrade industrial pollutants were found to be highly correlated with areas that experienced long-term exposure to preservative testing. PMID:29093702

Estimating soil erosion risk and evaluating erosion control measures for soil conservation planning at Koga watershed in the highlands of Ethiopia

NASA Astrophysics Data System (ADS)

Molla, Tegegne; Sisheber, Biniam

2017-01-01

Soil erosion is one of the major factors affecting sustainability of agricultural production in Ethiopia. The objective of this paper is to estimate soil erosion using the universal soil loss equation (RUSLE) model and to evaluate soil conservation practices in a data-scarce watershed region. For this purpose, soil data, rainfall, erosion control practices, satellite images and topographic maps were collected to determine the RUSLE factors. In addition, measurements of randomly selected soil and water conservation structures were done at three sub-watersheds (Asanat, Debreyakob and Rim). This study was conducted in Koga watershed at upper part of the Blue Nile basin which is affected by high soil erosion rates. The area is characterized by undulating topography caused by intensive agricultural practices with poor soil conservation practices. The soil loss rates were determined and conservation strategies have been evaluated under different slope classes and land uses. The results showed that the watershed is affected by high soil erosion rates (on average 42 t ha-1 yr-1), greater than the maximum tolerable soil loss (18 t ha-1 yr-1). The highest soil loss (456 t ha-1 yr-1) estimated from the upper watershed occurred on cultivated lands of steep slopes. As a result, soil erosion is mainly aggravated by land-use conflicts and topographic factors and the rugged topographic land forms of the area. The study also demonstrated that the contribution of existing soil conservation structures to erosion control is very small due to incorrect design and poor management. About 35 % out of the existing structures can reduce soil loss significantly since they were constructed correctly. Most of the existing structures were demolished due to the sediment overload, vulnerability to livestock damage and intense rainfall. Therefore, appropriate and standardized soil and water conservation measures for different erosion-prone land uses and land forms need to be implemented in Koga

Electrokinetic-Fenton remediation of organochlorine pesticides from historically polluted soil.

PubMed

Ni, Maofei; Tian, Shulei; Huang, Qifei; Yang, Yanmei

2018-04-01

Soil contamination by persistent organic pollutants (POPs) poses a great threat to historically polluted soil worldwide. In this study, soils were characterized, and organochlorine pesticides contained in the soils were identified and quantified. Individual electrokinetic (IE), EK-Fenton-coupled technologies (EF), and enhanced EK-Fenton treatment (E-1, E-2, and E-3) were applied to remediate soils contaminated with hexachloro-cyclohexane soprocide (HCH) and dichloro-diphenyl-trichloroethane (DDT). Variation of pH, electrical conductivity, and electroosmotic flow was evaluated during the EK-Fenton process. The IE treatment showed low removal efficiency for HCHs (30.5%) and DDTs (25.9%). In the EF treatment, the highest removal level (60.9%) was obtained for α-HCH, whereas P,P-DDT was the lowest (40.0%). Low solubility of pollutants impeded the HCH and DDT removal. After enhanced EK-Fenton treatment, final removal of pollutants decreased as follows: β-HCH (82.6%) > γ-HCH (81.6%) > α-HCH (81.2%) > δ-HCH (80.0%) > P,P-DDD (73.8%) > P,P-DDE (73.1%) > P,P-DDT (72.6%) > O,P-DDT (71.5%). The results demonstrate that EK-Fenton is a promising technology for POP removal in historically polluted soil.

A reservoir for solar-wind-produced water in lunar soils

NASA Astrophysics Data System (ADS)

Taylor, L.; Liu, Y.; Zent, A.; Quinn, R.; Ichimura, A.

2012-09-01

Discoveries of new sources of WATER on the Moon are becoming more numerous as our research progresses. All these recent discoveries of different forms of H (OH, HOH, and H2O ice) on the Moon, both endogenic and exogenic, have reshaped our view of "water" ON and IN the Moon Despite these discoveries, a potential large reservoir, LUNAR SOIL, has been largely overlooked until recently [1-2]. This was the first report and confirmation of OH in micro-meteoriteformed, impact glass in lunar soils; so-called "agglutinates", with abundances of up to 500 ppmw H2O, presents a medium for the accumulation of H from all the various sources. And the Lunar Soil Characterization Consortium (LSCC) [3-5] has demonstrated that the impact-melt glass portion of the fine-grain sizes of the lunar soil contains upwards of 70-80 % of such water-bearing glass. This could make for lunar soil feedstock with upwards of ~0.1 wt% H2O, in addition to any water produced solarwind hydrogen reduction of ilmenite, etc. Therefore, thermal rendering of the fine-portions of the soil for solar-wind volatiles (e.g., H, He-3, C, N) will encounter additional quantities of water, exceeding those of the absorbed solar-wind.

Maintenance of soil functioning following erosion of microbial diversity.

PubMed

Wertz, Sophie; Degrange, Valérie; Prosser, James I; Poly, Franck; Commeaux, Claire; Freitag, Thomas; Guillaumaud, Nadine; Roux, Xavier Le

2006-12-01

The paradigm that soil microbial communities, being very diverse, have high functional redundancy levels, so that erosion of microbial diversity is less important for ecosystem functioning than erosion of plant or animal diversity, is often taken for granted. However, this has only been demonstrated for decomposition/respiration functions, performed by a large proportion of the total microbial community, but not for specialized microbial groups. Here, we determined the impact of a decrease in soil microbial diversity on soil ecosystem processes using a removal approach, in which less abundant species were removed preferentially. This was achieved by inoculation of sterile soil microcosms with serial dilutions of a suspension obtained from the same non-sterile soil and subsequent incubation, to enable recovery of community size. The sensitivity to diversity erosion was evaluated for three microbial functional groups with known contrasting taxonomic diversities (ammonia oxidizers < denitrifiers < heterotrophs). Diversity erosion within each functional group was characterized using molecular fingerprinting techniques: ribosomal intergenic spacer analysis (RISA) for the eubacterial community, denaturing gradient gel electrophoresis (DGGE) analysis of nirK genes for denitrifiers, and DGGE analysis of 16S rRNA genes for betaproteobacterial ammonia oxidizers. In addition, we simulated the impact of the removal approach by dilution on the number of soil bacterial species remaining in the inoculum using values of abundance distribution of bacterial species reported in the literature. The reduction of the diversity of the functional groups observed from genetic fingerprints did not impair the associated functioning of these groups, i.e. carbon mineralization, denitrification and nitrification. This was remarkable, because the amplitude of diversity erosion generated by the dilution approach was huge (level of bacterial species loss was estimated to be around 99.99% for the

Hydrologic characterization of desert soils with varying degrees of pedogenesis: 1. field experiments evaluating plant-relevant soil water behavior

USGS Publications Warehouse

Nimmo, J.R.; Perkins, K.S.; Schmidt, K.M.; Miller, D.M.; Stock, J.D.; Singha, K.

2009-01-01

To assess the eff ect of pedogenesis on the soil moisture dynamics infl uencing the character and quality of ecological habitat, we conducted infi ltration and redistribution experiments on three alluvial deposits in the Mojave National Preserve: (i) recently deposited active wash sediments, (ii) a soil of early Holocene age, and (iii) a highly developed soil of late Pleistocene age. At each, we ponded water in a 1-m-diameter infi ltration ring for 2.3 h and monitored soil water content and matric pressure during and atier infi ltration, using probes and electrical resistivity imaging (ERI). Infi ltration and downward fl ow rates were greater in younger material, favoring deep-rooted species. Deep-rooted species tend to colonize the margins of washes, where they are unaff ected by sediment transport that inhibits colonization. The ERI results support important generalizations, for example that shallower than 0.5 m, infi ltrated water persists longer in highly developed soil, favoring shallow-rooted species. Soil moisture data for the two youngest soils suggested that saturation overshoot, which may have signifi cant but unexplored hydroecologic and pedogenic eff ects, occurred at the horizontally advancing weting front. Spatial heterogeneity of soil properties generally increased with pedogenic development. Evidence suggested that some early-stage developmental processes may promote uniformity; the intermediate- age soil appeared to have the least heterogeneity in terms of textural variation with depth, and also the least anisotropy. Lateral heterogeneity was pronounced in older soil, having a multitude of eff ects on the distribution and retention of soil water, and may facilitate certain water-conserving strategies of plants over what would be possible in a laterally homogeneous soil. ?? Soil Science Society of America.

A protocol for conducting rainfall simulation to study soil runoff.

PubMed

Kibet, Leonard C; Saporito, Louis S; Allen, Arthur L; May, Eric B; Kleinman, Peter J A; Hashem, Fawzy M; Bryant, Ray B

2014-04-03

Rainfall is a driving force for the transport of environmental contaminants from agricultural soils to surficial water bodies via surface runoff. The objective of this study was to characterize the effects of antecedent soil moisture content on the fate and transport of surface applied commercial urea, a common form of nitrogen (N) fertilizer, following a rainfall event that occurs within 24 hr after fertilizer application. Although urea is assumed to be readily hydrolyzed to ammonium and therefore not often available for transport, recent studies suggest that urea can be transported from agricultural soils to coastal waters where it is implicated in harmful algal blooms. A rainfall simulator was used to apply a consistent rate of uniform rainfall across packed soil boxes that had been prewetted to different soil moisture contents. By controlling rainfall and soil physical characteristics, the effects of antecedent soil moisture on urea loss were isolated. Wetter soils exhibited shorter time from rainfall initiation to runoff initiation, greater total volume of runoff, higher urea concentrations in runoff, and greater mass loadings of urea in runoff. These results also demonstrate the importance of controlling for antecedent soil moisture content in studies designed to isolate other variables, such as soil physical or chemical characteristics, slope, soil cover, management, or rainfall characteristics. Because rainfall simulators are designed to deliver raindrops of similar size and velocity as natural rainfall, studies conducted under a standardized protocol can yield valuable data that, in turn, can be used to develop models for predicting the fate and transport of pollutants in runoff.

A Protocol for Conducting Rainfall Simulation to Study Soil Runoff

PubMed Central

Kibet, Leonard C.; Saporito, Louis S.; Allen, Arthur L.; May, Eric B.; Kleinman, Peter J. A.; Hashem, Fawzy M.; Bryant, Ray B.

2014-01-01

Rainfall is a driving force for the transport of environmental contaminants from agricultural soils to surficial water bodies via surface runoff. The objective of this study was to characterize the effects of antecedent soil moisture content on the fate and transport of surface applied commercial urea, a common form of nitrogen (N) fertilizer, following a rainfall event that occurs within 24 hr after fertilizer application. Although urea is assumed to be readily hydrolyzed to ammonium and therefore not often available for transport, recent studies suggest that urea can be transported from agricultural soils to coastal waters where it is implicated in harmful algal blooms. A rainfall simulator was used to apply a consistent rate of uniform rainfall across packed soil boxes that had been prewetted to different soil moisture contents. By controlling rainfall and soil physical characteristics, the effects of antecedent soil moisture on urea loss were isolated. Wetter soils exhibited shorter time from rainfall initiation to runoff initiation, greater total volume of runoff, higher urea concentrations in runoff, and greater mass loadings of urea in runoff. These results also demonstrate the importance of controlling for antecedent soil moisture content in studies designed to isolate other variables, such as soil physical or chemical characteristics, slope, soil cover, management, or rainfall characteristics. Because rainfall simulators are designed to deliver raindrops of similar size and velocity as natural rainfall, studies conducted under a standardized protocol can yield valuable data that, in turn, can be used to develop models for predicting the fate and transport of pollutants in runoff. PMID:24748061

The Culturable Soil Antibiotic Resistome: A Community of Multi-Drug Resistant Bacteria

PubMed Central

Walsh, Fiona; Duffy, Brion

2013-01-01

Understanding the soil bacterial resistome is essential to understanding the evolution and development of antibiotic resistance, and its spread between species and biomes. We have identified and characterized multi-drug resistance (MDR) mechanisms in the culturable soil antibiotic resistome and linked the resistance profiles to bacterial species. We isolated 412 antibiotic resistant bacteria from agricultural, urban and pristine soils. All isolates were multi-drug resistant, of which greater than 80% were resistant to 16–23 antibiotics, comprising almost all classes of antibiotic. The mobile resistance genes investigated, (ESBL, bla NDM-1, and plasmid mediated quinolone resistance (PMQR) resistance genes) were not responsible for the respective resistance phenotypes nor were they present in the extracted soil DNA. Efflux was demonstrated to play an important role in MDR and many resistance phenotypes. Clinically relevant Burkholderia species are intrinsically resistant to ciprofloxacin but the soil Burkholderia species were not intrinsically resistant to ciprofloxacin. Using a phenotypic enzyme assay we identified the antibiotic specific inactivation of trimethoprim in 21 bacteria from different soils. The results of this study identified the importance of the efflux mechanism in the soil resistome and variations between the intrinsic resistance profiles of clinical and soil bacteria of the same family. PMID:23776501

The culturable soil antibiotic resistome: a community of multi-drug resistant bacteria.

PubMed

Walsh, Fiona; Duffy, Brion

2013-01-01

Understanding the soil bacterial resistome is essential to understanding the evolution and development of antibiotic resistance, and its spread between species and biomes. We have identified and characterized multi-drug resistance (MDR) mechanisms in the culturable soil antibiotic resistome and linked the resistance profiles to bacterial species. We isolated 412 antibiotic resistant bacteria from agricultural, urban and pristine soils. All isolates were multi-drug resistant, of which greater than 80% were resistant to 16-23 antibiotics, comprising almost all classes of antibiotic. The mobile resistance genes investigated, (ESBL, bla NDM-1, and plasmid mediated quinolone resistance (PMQR) resistance genes) were not responsible for the respective resistance phenotypes nor were they present in the extracted soil DNA. Efflux was demonstrated to play an important role in MDR and many resistance phenotypes. Clinically relevant Burkholderia species are intrinsically resistant to ciprofloxacin but the soil Burkholderia species were not intrinsically resistant to ciprofloxacin. Using a phenotypic enzyme assay we identified the antibiotic specific inactivation of trimethoprim in 21 bacteria from different soils. The results of this study identified the importance of the efflux mechanism in the soil resistome and variations between the intrinsic resistance profiles of clinical and soil bacteria of the same family.

Demonstration of nonlinear effects in acoustic landmine experiments using a clamped-plate soil oscillator

NASA Astrophysics Data System (ADS)

Korman, Murray S.; Bond, Emilia

2005-09-01

Current nonlinear experiments involving the detection of plastic landmines using acoustic-to-seismic coupling have been developed from Sabatier's (linear) and Donskoy's (nonlinear) earlier methods. A laboratory apparatus called the soil-plate oscillator has been developed at the National Center for Physical Acoustics, and later at the U.S. Naval Academy, to model acoustic mine detection. The apparatus consists of a thick-walled cylinder filled with sifted homogeneous soil resting on a thin elastic plate that is clamped to the bottom of the column. It represents a good simplified physical model for VS 1.6 and VS 2.2 inert anti-tank plastic buried landmines. Using a loudspeaker (located over the soil) that is driven by a swept sinusoid, tuning curve experiments are performed. The vibration amplitude versus frequency is measured on a swept spectrum analyzer using an accelerometer located on the soil-air interface or under the plate. The backbone curve shows a linear decrease in peak frequency versus increasing amplitude. A two-tone test experiment is performed using two loudspeakers generating acoustic frequencies (closely spaced on either side of resonance, typically ~100 Hz). A rich vibration spectrum of combination frequency tones (along with the primaries) is observed which is characteristic of actual nonlinear detection schemes.

Dryland soil microbial communities display spatial biogeographic patterns associated with soil depth and soil parent material

USGS Publications Warehouse

Steven, Blaire; Gallegos-Graves, La Verne; Belnap, Jayne; Kuske, Cheryl R.

2013-01-01

Biological soil crusts (biocrusts) are common to drylands worldwide. We employed replicated, spatially nested sampling and 16S rRNA gene sequencing to describe the soil microbial communities in three soils derived from different parent material (sandstone, shale, and gypsum). For each soil type, two depths (biocrusts, 0–1 cm; below-crust soils, 2–5 cm) and two horizontal spatial scales (15 cm and 5 m) were sampled. In all three soils, Cyanobacteria and Proteobacteria demonstrated significantly higher relative abundance in the biocrusts, while Chloroflexi and Archaea were significantly enriched in the below-crust soils. Biomass and diversity of the communities in biocrusts or below-crust soils did not differ with soil type. However, biocrusts on gypsum soil harbored significantly larger populations of Actinobacteria and Proteobacteria and lower populations of Cyanobacteria. Numerically dominant operational taxonomic units (OTU; 97% sequence identity) in the biocrusts were conserved across the soil types, whereas two dominant OTUs in the below-crust sand and shale soils were not identified in the gypsum soil. The uniformity with which small-scale vertical community differences are maintained across larger horizontal spatial scales and soil types is a feature of dryland ecosystems that should be considered when designing management plans and determining the response of biocrusts to environmental disturbances.

The Soil Is Alive!

ERIC Educational Resources Information Center

Science and Children, 1989

1989-01-01

Describes activities which demonstrate the abundance of organisms living underground. Provides outlined directions, lists of materials, and a soil ecosystem transparency for delving into the properties of soil. (RT)

Demonstratives in Motion: The Grammaticalization of Demonstratives as a Window into Synchronic Phenomena

ERIC Educational Resources Information Center

Ferrazzano, Lisa Reisig

2013-01-01

There is significant variation in the literature on how demonstratives are characterized semantically, leading to divergent syntactic analyses of demonstratives. A major source of this disagreement regards how distance specifications relate to the demonstrative: whether [+/- speaker] is an integral property of the demonstrative or not. I argue…

Seasonal variation in functional properties of microbial communities in beech forest soil

PubMed Central

Koranda, Marianne; Kaiser, Christina; Fuchslueger, Lucia; Kitzler, Barbara; Sessitsch, Angela; Zechmeister-Boltenstern, Sophie; Richter, Andreas

2013-01-01

Substrate quality and the availability of nutrients are major factors controlling microbial decomposition processes in soils. Seasonal alteration in resource availability, which is driven by plants via belowground C allocation, nutrient uptake and litter fall, also exerts effects on soil microbial community composition. Here we investigate if seasonal and experimentally induced changes in microbial community composition lead to alterations in functional properties of microbial communities and thus microbial processes. Beech forest soils characterized by three distinct microbial communities (winter and summer community, and summer community from a tree girdling plot, in which belowground carbon allocation was interrupted) were incubated with different 13C-labeled substrates with or without inorganic N supply and analyzed for substrate use and various microbial processes. Our results clearly demonstrate that the three investigated microbial communities differed in their functional response to addition of various substrates. The winter communities revealed a higher capacity for degradation of complex C substrates (cellulose, plant cell walls) than the summer communities, indicated by enhanced cellulase activities and reduced mineralization of soil organic matter. In contrast, utilization of labile C sources (glucose) was lower in winter than in summer, demonstrating that summer and winter community were adapted to the availability of different substrates. The saprotrophic community established in girdled plots exhibited a significantly higher utilization of complex C substrates than the more plant root associated community in control plots if additional nitrogen was provided. In this study we were able to demonstrate experimentally that variation in resource availability as well as seasonality in temperate forest soils cause a seasonal variation in functional properties of soil microorganisms, which is due to shifts in community structure and physiological adaptations

Processing Protocol for Soil Samples Potentially ...

EPA Pesticide Factsheets

Method Operating Procedures This protocol describes the processing steps for 45 g and 9 g soil samples potentially contaminated with Bacillus anthracis spores. The protocol is designed to separate and concentrate the spores from bulk soil down to a pellet that can be used for further analysis. Soil extraction solution and mechanical shaking are used to disrupt soil particle aggregates and to aid in the separation of spores from soil particles. Soil samples are washed twice with soil extraction solution to maximize recovery. Differential centrifugation is used to separate spores from the majority of the soil material. The 45 g protocol has been demonstrated by two laboratories using both loamy and sandy soil types. There were no significant differences overall between the two laboratories for either soil type, suggesting that the processing protocol would be robust enough to use at multiple laboratories while achieving comparable recoveries. The 45 g protocol has demonstrated a matrix limit of detection at 14 spores/gram of soil for loamy and sandy soils.

Demonstration of a Fractured Rock Geophysical Toolbox (FRGT) for Characterization and Monitoring of DNAPL Biodegradation in Fractured Rock Aquifers

DTIC Science & Technology

2016-01-01

USER’S GUIDE Demonstration of a Fractured Rock Geophysical Toolbox (FRGT) for Characterization and Monitoring of DNAPL Biodegradation in...Toolbox (FRGT) for Characterization and Monitoring of DNAPL Biodegradation in Fractured Rock Aquifers F.D. Day-Lewis, C.D. Johnson, J.H. Williams, C.L...are doomed to failure. DNAPL biodegradation charactrization and monitoring, remediation, fractured rock aquifers. Unclassified Unclassified UU UL 6

Soil-pipe interaction modeling for pipe behavior prediction with super learning based methods

NASA Astrophysics Data System (ADS)

Shi, Fang; Peng, Xiang; Liu, Huan; Hu, Yafei; Liu, Zheng; Li, Eric

2018-03-01

Underground pipelines are subject to severe distress from the surrounding expansive soil. To investigate the structural response of water mains to varying soil movements, field data, including pipe wall strains in situ soil water content, soil pressure and temperature, was collected. The research on monitoring data analysis has been reported, but the relationship between soil properties and pipe deformation has not been well-interpreted. To characterize the relationship between soil property and pipe deformation, this paper presents a super learning based approach combining feature selection algorithms to predict the water mains structural behavior in different soil environments. Furthermore, automatic variable selection method, e.i. recursive feature elimination algorithm, were used to identify the critical predictors contributing to the pipe deformations. To investigate the adaptability of super learning to different predictive models, this research employed super learning based methods to three different datasets. The predictive performance was evaluated by R-squared, root-mean-square error and mean absolute error. Based on the prediction performance evaluation, the superiority of super learning was validated and demonstrated by predicting three types of pipe deformations accurately. In addition, a comprehensive understand of the water mains working environments becomes possible.

Improving the phytoremediation of heavy metals contaminated soil by use of sewage sludge.

PubMed

Placek, Agnieszka; Grobelak, Anna; Kacprzak, Malgorzata

2016-01-01

Sewage sludge, in particular from the food industry, is characterized by fertilizing properties, due to the high content of organic matter and nutrients. The application of sewage sludge causes an improvement of soil parameters as well as increase in cation exchange capacity, and thus stronger binding of cations in the soil environment, which involves the immobilization of nutrients and greater resistance to contamination. In a field experiment sewage sludge has been used as an additive to the soil supporting the phytoremediation process of land contaminated with heavy metals (Cd, Zn, and Pb) using trees species: Scots pine (Pinus silvestris L.), Norway spruce (Picea abies L.), and oak (Quercus robur L.). The aim of the research was to determine how the application of sewage sludge into the soil surface improves the phytoremediation process. The conducted field experiment demonstrated that selected trees like Scots pine and Norway spruce, because of its excellent adaptability, can be used in the remediation of soil. Oak should not be used in the phytoremediation process of soils contaminated with high concentrations of trace elements in the soil, because a significant amount of heavy metals was accumulated in the leaves of oak causing a risk of recontamination.

Evaporation from soils subjected to natural boundary conditions at the land-atmospheric interface

NASA Astrophysics Data System (ADS)

Smits, K.; Illngasekare, T.; Ngo, V.; Cihan, A.

2012-04-01

wind boundary conditions was generated and results from numerical simulations were compared with experimental data. Results demonstrate that the boundary condition approaches varied in their ability to capture stage 1- and stage 2- evaporation. Results also demonstrated the importance of properly characterizing soil thermal properties and accounting for dry soil conditions. The contribution of film flow to hydraulic conductivity for the layer above the drying front is dominant compared to that of capillary flow, demonstrating the importance of including film flow in modeling efforts for dry soils, especially for fine grained soils. Comparisons of different formulations of the surface boundary condition validate the need for joint evaluation of heat and mass transfer for better modeling accuracy. This knowledge is applicable to many current hydrologic and environmental problems to include climate modeling and the simulation of contaminant transport and volatilization in the shallow subsurface. Smits, K. M., A. Cihan, T. Sakaki, and T. H. Illangasekare (2011). Evaporation from soils under thermal boundary conditions: Experimental and modeling investigation to compare equilibrium- and nonequilibrium-based approaches, Water Resour. Res., 47, W05540, doi:10.1029/2010WR009533.

Anerobic soil disinfestation efficacy associated with altered soil microbiome and metabolome

USDA-ARS?s Scientific Manuscript database

Anaerobic soil disinfestation (ASD) has demonstrated potential to control numerous soil-borne pathogens in a diversity of production systems. A variety of environmental, biological and application attributes have potential to determine the overall capacity of ASD to provide effective disease control...

Soil organic matter stabilization in grazing highland soils from the Andean Plateau

NASA Astrophysics Data System (ADS)

Muñoz, M. A.; Faz, A.; Zornoza, R.

2012-04-01

Grasslands comprise approximately 40% of the earth's land area and play a critical role in the global carbon cycle. Apolobamba is a grazing highland located in the Andean Plateau where sustainable vicuna (Vicugna vicugna) management programme is carried out. Understanding the soil properties and the organic matter dynamics is fundamental to determine the grazing impacts in the carbon reservoirs. However, the labile and recalcitrant fractions of C have not been widely studied under field conditions, especially in high grasslands. The objectives of this survey were to: (i) achieve a soil characterization through general physico-chemical properties and (ii) study soil organic matter stabilization through recalcitrant and labile carbon budgets in Apolobamba. Regarding the lastly vicuna censuses carried out in the studied area, eight representative zones with different vicuna densities were selected and soil samples were collected. Other characteristics were also considered to select the study zones: (1) alpaca densities, (2) vegetation communities (3) plant cover and (4) landscape and geo-morphological description. Recalcitrant and water soluble organic carbon were determined as well as recalcitrant index. General soil characterization showed strongly acid and no saline soils with high cation exchange capacity and sandy-loam and loam textures. Total nitrogen contents indicated no limitation for the native vegetation growth. In general, no relationships were found among general soil properties, vicuna and alpaca densities; however, zones with highest alpaca density could be prone to soil erosion based on the available P distribution and the texture results. Additionally, a negative alpaca grazing influence in the soil organic carbon stocks was observed. On the other hand, high soil recalcitrant carbon contents (3.7 ± 0.3 kg m-2) and recalcitrance index (0.8 ± 0.1) were found. Likewise, labile C exhibited similar values to those obtained from researchers conducted in

[Characteristics of soil ammonia-oxidation microbial communities in different subtropical forests, China].

PubMed

Li, Yong-Chun; Liu, Bu-Rong; Guo, Shuai; Wu, Qi-Feng; Qin, Hua; Wu, Jia-Sen; Xu, Qiu-Fang

2014-01-01

To investigate the effects of different forest stands in subtropical China on the communities of soil ammonia-oxidizing microorganisms, we characterized the abundance of ammonia-oxidizing archaea (AOA) and bacteria (AOB), and the community structure of AOA in soils under stands of broad-leaved (BF) , Chinese fir (CF) , Pinus massoniana (PF) and moso bamboo (MB) forests using real-time quantitative PCR and denaturing gradient gel electrophoresis (DGGE). The results showed that the AOA gene copy numbers (1.62 x 10(6)-1.88 x 10(7) per gram of dry soil) were significantly higher than those of AOB genes (2.41 x 10(5)-4.36 x 10(5) per gram of dry soil). Significantly higher soil AOA abundance was detected in the MB than that in the CF (P < 0.05), and the latter was significantly higher than that in the BF and PF soils (P < 0.05). There were no significant differences in the soil AOB abundance among the four forest stands. As indicated by DGGE pattern, soil AOA species varied among the four forest stands. There was a difference in the soil AOA communities between the CF and MB stands. The AOA demonstrated a competitive advantage over the AOB in the soils under these major subtropical forests. Soil pH, concentrations of soil available potassium and organic carbon as well as the forest type were the main factors that influence the variation of AOA community structure and diversity.

Average pollutant concentration in soil profile simulated with Convective-Dispersive Equation. Model and Manual

USDA-ARS?s Scientific Manuscript database

Different parts of soil solution move with different velocities, and therefore chemicals are leached gradually from soil with infiltrating water. Solute dispersivity is the soil parameter characterizing this phenomenon. To characterize the dispersivity of soil profile at field scale, it is desirable...

Vertical characterization of soil contamination using multi-way modeling--a case study.

PubMed

Singh, Kunwar P; Malik, Amrita; Basant, Ankita; Ojha, Priyanka

2008-11-01

This study describes application of chemometric multi-way modeling approach to analyze the dataset pertaining to soils of industrial area with a view to assess the soil/sub-soil contamination, accumulation pathways and mobility of contaminants in the soil profiles. The three-way (sampling depths, chemical variables, sampling sites) dataset on heavy metals in soil samples collected from three different sites in an industrial area, up to a depth of 60 m each was analyzed using three-way Tucker3 model validated for stability and goodness of fit. A two component Tucker3 model, explaining 66.6% of data variance, allowed interpretation of the data information in all the three modes. The interpretation of core elements revealing interactions among the components of different modes (depth, variables, sites) allowed inferring more realistic information about the contamination pattern of soils both along the horizontal and vertical coordinates, contamination pathways, and mobility of contaminants through soil profiles, as compared to the traditional data analysis techniques. It concluded that soils at site-1 and site-2 are relatively more contaminated with heavy metals of both the natural as well as anthropogenic origins, as compared to the soil of site-3. Moreover, the accumulation pathways of metals for upper shallow layers and deeper layers of soils in the area were differentiated. The information generated would be helpful in developing strategies for remediation of the contaminated soils for reducing the subsequent risk of ground-water contamination in the study region.

Event- and site-specific soil wetting and seasonal change in amount of soil water

USDA-ARS?s Scientific Manuscript database

Numerous studies have examined ways to characterize the central tendency of soil water within a field or watershed. Extreme changes in water content reveal more about water movement within the area. The purpose of this study was to determine if extreme soil water changes varied among sites, and to s...

Comparison of Paenibacillus azotofixans Strains Isolated from Rhizoplane, Rhizosphere, and Non-Root-Associated Soil from Maize Planted in Two Different Brazilian Soils

PubMed Central

Seldin, Lucy; Rosado, Alexandre Soares; da Cruz, Davi William; Nobrega, Alberto; van Elsas, Jan Dirk; Paiva, Edilson

1998-01-01

Paenibacillus azotofixans is a nitrogen-fixing bacterium often found in soil and in the rhizospheres of different grasses. In this study, two Brazilian clay soils were planted with cross-hybrid maize (BR-201) and four stages of plant growth were analyzed to characterize the P. azotofixans populations present in the rhizoplanes, rhizospheres, and non-root-associated soils (herein called nonrhizospheres). A total of 106 strains were isolated and identified as P. azotofixans with an API 50CH kit, by classical biochemical tests, and via the use of specific primers based on the 16S rRNA gene in PCRs. To compare the isolated strains, phenotypic characteristics were determined and three different probes were used in hybridization experiments: two nif probes and one probe comprising a 0.58-kb fragment cloned from the P. azotofixans C3L4 genome. These results were used to construct a dendrogram, in which two main clusters could be observed. One cluster contained exclusively strains from Várzea soil, and the other contained the majority of strains from Cerrado soil. The 60 strains from Várzea soil and the 46 strains from Cerrado soil were further analyzed with REP and BOX primers, respectively. Based on the patterns obtained, it was possible to identify 21 different groups among strains from Várzea soil and 4 different groups among strains from Cerrado soil. These different patterns were tested by multivariate analysis of variance, and differences in the populations of P. azotofixans during the four stages of plant growth were demonstrated. Moreover, strains isolated from the rhizoplanes, rhizospheres, and nonrhizospheres of maize planted in Cerrado and Várzea soils were shown to be statistically different; the diversity of P. azotofixans strains was affected by the soil type. PMID:9758811

Chemical Speciation and Bioaccessibility of Arsenic and Chromiumin Chromated Copper Arsenate-Treated Wood and Soils

DOE Office of Scientific and Technical Information (OSTI.GOV)

Nico, Peter S.; Ruby, Michael V.; Lowney, Yvette W.

This research compares the As and Cr chemistry ofdislodgeable residues from Chromated Copper Arsenate (CCA)-treated woodcollected by two different techniques (directly from the board surfaceeither by rubbing with a soft bristle brush or from human hands aftercontact with CCA-treated wood), and demonstrates that these materials areequivalent in terms of the chemical form and bonding of As and Cr and interms of the As leaching behavior. This finding links the extensivechemical characterization and bioavailability testing that has been donepreviously on the brush-removed residue to a material that is derivedfrom human skin contact with CCA-treated wood. Additionally, thisresearch characterizes the arsenic presentmore » in biological fluids (sweatand simulated gastric fluid) following contact with these residues. Thedata demonstrate that in biological fluids, the arsenic is presentprimarily as free arsenate ions.Arsenic-containing soils were alsoextracted into human sweat to evaluate the potential for arsenicdissolution from soils at the skin surface. For soils from field sites,only a small fraction of the total arsenic is soluble in sweat. Based oncomparisons to reference materials that have been used in in vivo dermalabsorption studies, these findings suggest that the actual relativebioavailability via dermal absorption of As from CCA-residues and soilmay be well below the current default value of 3 percent used by U.S.EPA.« less

Characterization and Phenanthrene Sorption of Natural and Pyrogenic Organic Matter Fractions.

PubMed

Jin, Jie; Sun, Ke; Wang, Ziying; Yang, Yan; Han, Lanfang; Xing, Baoshan

2017-03-07

Pyrogenic humic acid (HA) is released into the environment during the large-scale application of biochar. However, the biogeochemistry of pyrogenic organic matter (PyOM) fractions and their sorption of hydrophobic organic compounds (HOCs) are poorly understood in comparison with natural organic matter (NOM) fractions. HA and humin (HM) fractions isolated from soils and the oxidized biochars were characterized. Sorption of phenanthrene (PHE) by these fractions was also examined. The characterization results demonstrate that pyrogenic HAs are different from natural HAs, with the former having lower atomic H/C ratios, more abundant aromatic C, and higher concentrations of surface carboxylic groups. Compared with the fresh biochars, the K oc of PHE on their oxidized biochars, pyrogenic HA, and HM fractions were undiminished, which is encouraging for the use of biochar in soil remediation. The PyOM fractions exhibited stronger nonlinear sorption than the NOM fractions. In addition, the PyOM fractions had higher sorption capacity than the NOM fractions due to their low polar C content and high aryl C content. The results obtained from this work will shed new light on the impact of the addition of biochar on the biogeochemistry of soil organic matter and on the fate of HOCs in biochar-amended soil.

Phosphorus exchangeability and leaching losses from two grassland soils.

PubMed

Sinaj, S; Stamm, C; Toor, G S; Condron, L M; Hendry, T; Di, H J; Cameron, K C; Frossard, E

2002-01-01

Although phosphate phosphorus (P) is strongly sorbed in many soils, it may be quickly transported through the soil by preferential flow. Under flood irrigation, preferential flow is especially pronounced and associated solute losses may be important. Phosphorus losses induced by flood irrigation were investigated in a lysimeter study. Detailed soil chemical analyses revealed that P was very mobile in the topsoil, but the higher P-fixing capacity of the subsoil appeared to restrict P mobility. Application of a dye tracer enabled preferential flow pathways to be identified. Soil sampling according to dye staining patterns revealed that exchangeable P was significantly greater in preferential flow areas as compared with the unstained soil matrix. This could be partly attributed to the accumulation of organic carbon and P, together with enhanced leaching of Al- and Fe-oxides in the preferential flow areas, which resulted in reduced P sorption. The irrigation water caused a rapid hydrologic response by displacement of resident water from the subsoil. Despite the occurrence of preferential flow, most of the outflowing water was resident soil water and very low in P. In these soils the occurrence of preferential flow per se is not sufficient to cause large P losses even if the topsoil is rich in P. It appears that the P was retained in lower parts of the soil profile characterized by a very high P-fixing capacity. This study demonstrates the risks associated with assessing potential P losses on the basis of P mobility in the topsoil alone.

Effect of land use pattern change from paddy soil to vegetable soil on the adsorption-desorption of cadmium by soil aggregates.

PubMed

Zhang, Qiu; Li, Zhongwu; Huang, Bin; Luo, Ninglin; Long, Lingzhi; Huang, Mei; Zhai, Xiuqing; Zeng, Guangming

2017-01-01

The influence of land use change from paddy soil to vegetable soil on the adsorption-desorption behavior of Cd in soil aggregates and the variation in soil properties were investigated. The vegetable soil was characterized by lower pH, organic matter content, cation exchange capacity (CEC), free iron oxides, manganese oxides, and catalase activity and higher urease activity compared with the paddy soil. In the isothermal adsorption and desorption experiments, the adsorption characteristics of Cd of the two soils could be well described by Langmuir and Freundlich equations. The adsorption capacity of vegetable soil decreased 22.72 %, and the desorption rate increased 35 % with respect to paddy soil. Therefore, conversion from paddy to vegetable field can reduce the adsorption ability to Cd of the soil to a certain extent. Both the two soils reached the maximum adsorption capacity and the minimum desorption rate in the <0.002-mm faction. The adsorption capacity of Cd in paddy and vegetable soils exhibited great reliance on the content of CEC. Desorption rate was negatively correlated with the four indicators: organic matter, CEC, free iron oxides, and manganese oxides, and specific adsorption was primarily controlled by soil organic matter and manganese oxides.

First Preliminary Report on Isolation and Characterization of Novel Acinetobacter spp. in Casing Soil Used for Cultivation of Button Mushroom, Agaricus bisporus (Lange) Imbach

PubMed Central

Choudhary, D. K.

2011-01-01

Despite evaluation of large number of agroindustrial wastes for their use as casing material for Agaricus bisporus (Lange) Imbach cultivation, scant attention has been given to the importance of biological properties of casing materials. In the present study, an attempt was made to characterize the bacterial flora in casing layer, namely, Farm Yard Manure (FYM) and Spent Mushroom Substrate/spent compost (SMS/SC) (FYM+SC, 3 : 1) and FYM and Vermi Compost (VC) (FYM+VC, 3 : 1), employing partial 16S rDNA sequencing. Available data showed a significant variety of organisms that included Acinetobacter and Pseudomonas of the γ-proteobacteria, that were the most frequently encountered genera. This is the first preliminary report on the microbial diversity of casing soils and demonstrates the presence of Acinetobacter spp. that has not been previously described in casing material. PMID:22007222

Chemical characterization and ecotoxicity of three soil foaming agents used in mechanized tunneling.

PubMed

Baderna, Diego; Lomazzi, Eleonora; Passoni, Alice; Pogliaghi, Alberto; Petoumenou, Maria Ifigeneia; Bagnati, Renzo; Lodi, Marco; Viarengo, Aldo; Sforzini, Susanna; Benfenati, Emilio; Fanelli, Roberto

2015-10-15

The construction of tunnels and rocks with mechanized drills produces several tons of rocky debris that are today recycled as construction material or as soil replacement for covering rocky areas. The lack of accurate information about the environmental impact of these excavated rocks and foaming agents added during the excavation process has aroused increasing concern for ecosystems and human health. The present study proposes an integrated approach to the assessment of the potential environmental impact of three foaming agents containing different anionic surfactants and other polymers currently on the market and used in tunnel boring machines. The strategy includes chemical characterization with high resolution mass spectrometry techniques to identify the components of each product, the use of in silico tools to perform a similarity comparison among these compounds and some pollutants already listed in regulatory frameworks to identify possible threshold concentrations of contamination, and the application of a battery of ecotoxicological assays to investigate the impact of each foaming mixture on model organisms of soil (higher plants and Eisenia andrei) and water communities (Daphnia magna). The study identified eleven compounds not listed on the material safety data sheets for which we have identified possible concentrations of contamination based on existing regulatory references. The bioassays allowed us to determine the no effect concentrations (NOAECs) of the three mixtures, which were subsequently used as threshold concentration for the product in its entirety. The technical mixtures used in this study have a different degree of toxicity and the predicted environmental concentrations based on the conditions of use are lower than the NOAEC for soils but higher than the NOAEC for water, posing a potential risk to the waters due to the levels of foaming agents in the muck. Copyright © 2015 Elsevier B.V. All rights reserved.

Characterization of H2S removal and microbial community in landfill cover soils.

PubMed

Xia, Fang-Fang; Zhang, Hong-Tao; Wei, Xiao-Meng; Su, Yao; He, Ruo

2015-12-01

H2S is a source of odors at landfills and poses a threat to the surrounding environment and public health. In this work, compared with a usual landfill cover soil (LCS), H2S removal and biotransformation were characterized in waste biocover soil (WBS), an alternative landfill cover material. With the input of landfill gas (LFG), the gas concentrations of CH4, CO2, O2, and H2S, microbial community and activity in landfill covers changed with time. Compared with LCS, lower CH4 and H2S concentrations were detected in the WBS. The potential sulfur-oxidizing rate and sulfate-reducing rate as well as the contents of acid-volatile sulfide, SO4(2-), and total sulfur in the WBS and LCS were all increased with the input of LFG. After exposure to LFG for 35 days, the sulfur-oxidizing rate of the bottom layer of the WBS reached 82.5 μmol g dry weight (d.w.)(-1) day(-1), which was 4.3-5.4 times of that of LCS. H2S-S was mainly deposited in the soil covers, while it escaped from landfills to the atmosphere. The adsorption, absorption, and biotransformation of H2S could lead to the decrease in the pH values of landfill covers; especially, in the LCS with low pH buffer capacity, the pH value of the bottom layer dropped to below 4. Pyrosequencing of 16S ribosomal RNA (rRNA) gene showed that the known sulfur-metabolizing bacteria Ochrobactrum, Paracoccus, Comamonas, Pseudomonas, and Acinetobacter dominated in the WBS and LCS. Among them, Comamonas and Acinetobacter might play an important role in the metabolism of H2S in the WBS. These findings are helpful to understand sulfur bioconversion process in landfill covers and to develop techniques for controlling odor pollution at landfills.

Inferring Soil Moisture Memory from Streamflow Observations Using a Simple Water Balance Model

NASA Technical Reports Server (NTRS)

Orth, Rene; Koster, Randal Dean; Seneviratne, Sonia I.

2013-01-01

Soil moisture is known for its integrative behavior and resulting memory characteristics. Soil moisture anomalies can persist for weeks or even months into the future, making initial soil moisture a potentially important contributor to skill in weather forecasting. A major difficulty when investigating soil moisture and its memory using observations is the sparse availability of long-term measurements and their limited spatial representativeness. In contrast, there is an abundance of long-term streamflow measurements for catchments of various sizes across the world. We investigate in this study whether such streamflow measurements can be used to infer and characterize soil moisture memory in respective catchments. Our approach uses a simple water balance model in which evapotranspiration and runoff ratios are expressed as simple functions of soil moisture; optimized functions for the model are determined using streamflow observations, and the optimized model in turn provides information on soil moisture memory on the catchment scale. The validity of the approach is demonstrated with data from three heavily monitored catchments. The approach is then applied to streamflow data in several small catchments across Switzerland to obtain a spatially distributed description of soil moisture memory and to show how memory varies, for example, with altitude and topography.

Characterizing Soil Lead Contamination Near Streams in Oakland, California

NASA Astrophysics Data System (ADS)

Tanouye, D.

2017-12-01

Lead (Pb) contamination of soils, groundwater, and surface waters is a major concern because of the potential health risks related to accumulation of high levels of lead in blood. This is a pervasive issue in many low-income neighborhoods throughout the United States, and is documented to be particularly acute in West Oakland, California. The fate and transport of lead in the environment is largely dependent on how it will bind to various solids and compounds in solution. These adsorption mechanisms are a principal aspect of metal dissolution and chemical speciation. Stream channels are natural drainage areas for urban runoff, and may represent a hot spot for increased levels of lead. This study evaluates the environmental conditions at 15 sites near streams in West Oakland using in-situ soil sampling with the handheld X-Ray Fluorescence (XRF) analyzer to measure concentrations of lead in soil. Results from this study suggest that the levels of lead in soils near stream channels are generally lower than the regional regulatory screening level of 80 milligrams per kilogram (mg/kg), but the highest concentrations are found near stream banks. The spatial distribution can be explained by a contaminant transport process related to the presence of fluvial channels.

TECHNICAL EVALUATION OF REMEDIATION TECHNOLOGIES FOR PLUTONIUM-CONTAMINATED SOILS AT THE NEVADA TEST SITE (NTS)

DOE Office of Scientific and Technical Information (OSTI.GOV)

Steve Hoeffner

2003-12-31

The Clemson Environmental Technologies Laboratory (CETL) was contracted by the National Energy Technology Center to evaluate technologies that might be used to reduce the volume of plutonium-contaminated soil at the Nevada Test Site. The project has been systematically approached. A thorough review and summary was completed for: (1) The NTS soil geological, geochemical and physical characteristics; (2) The characteristics and chemical form of the plutonium that is in these soils; (3) Previous volume reduction technologies that have been attempted on the NTS soils; (4) Vendors with technology that may be applicable; and (5) Related needs at other DOE sites. Soilsmore » from the Nevada Test Site were collected and delivered to the CETL. Soils were characterized for Pu-239/240, Am-241 and gross alpha. In addition, wet sieving and the subsequent characterization were performed on soils before and after attrition scrubbing to determine the particle size distribution and the distribution of Pu-239/240 and gross alpha as a function of particle size. Sequential extraction was performed on untreated soil to provide information about how tightly bound the plutonium was to the soil. Magnetic separation was performed to determine if this could be useful as part of a treatment approach. Using the information obtained from these reviews, three vendors were selected to demonstration their volume reduction technologies at the CETL. Two of the three technologies, bioremediation and soil washing, met the performance criteria. Both were able to significantly reduce the concentration plutonium in the soil from around 1100 pCi/g to 200 pCi/g or less with a volume reduction of around 95%, well over the target 70%. These results are especially encouraging because they indicate significant improvement over that obtained in these earlier pilot and field studies. Additional studies are recommended.« less

FIELD DEMONSTRATION AND QUALITY ASSURANCE ...

EPA Pesticide Factsheets

The Demonstration of innovative field devices for the measurement of mercury in soil and sediment is being conducted under the EPA's SITE Program in February 2003 at the United States Department of Energy's (DOE) Oak Ridge National Laboratory (ORNL) in Oak Ridge, Tennessee and the Tennessee Department of Environment and Conservation's Department of Energy Oversight facility in Oak Ridge, Tennessee. The primary purpose of the Demonstration is to evaluate innovative field devices for the measurement of mercury in soil and sediment based on their performance and cost as compared to a conventional, off-site laboratory analytical method. The five field measurement devices listed below will be demonstrated: .Metorex's X-M ET 2000 Metal Master Analyzer, X-Ray Fluorescence Analyzer .Milestone Inc.'s Direct Mercury Analyzer (DMA-80), Thermal Decomposition Instrument.NITON's XL-700 Series Multi-Element Analyzer, X-Ray Fluorescence Analyzer .Ohio Lumex's RA-915+ Portable Mercury Analyzer, Atomic Absorption Spectrometer, Thermal Decompostion Attachment RP 91C .MTI, Inc.'s PDV 5000 Hand Held Instrument, Anodic Stripping Voltamm eter<1). This Demonstration Plan describes the procedures that will be used to verify the performance and cost of each field measurement device. The plan incorporates the quality assurance and quality control elements needed to generate data of sufficient quality to document each device's performance and cost. A separate Innovative Technology Verifica

Quantifying Diffuse Contamination: Method and Application to Pb in Soil.

PubMed

Fabian, Karl; Reimann, Clemens; de Caritat, Patrice

2017-06-20

A new method for detecting and quantifying diffuse contamination at the continental to regional scale is based on the analysis of cumulative distribution functions (CDFs). It uses cumulative probability (CP) plots for spatially representative data sets, preferably containing >1000 determinations. Simulations demonstrate how different types of contamination influence elemental CDFs of different sample media. It is found that diffuse contamination is characterized by a distinctive shift of the low-concentration end of the distribution of the studied element in its CP plot. Diffuse contamination can be detected and quantified via either (1) comparing the distribution of the contaminating element to that of an element with a geochemically comparable behavior but no contamination source (e.g., Pb vs Rb), or (2) comparing the top soil distribution of an element to the distribution of the same element in subsoil samples from the same area, taking soil forming processes into consideration. Both procedures are demonstrated for geochemical soil data sets from Europe, Australia, and the U.S.A. Several different data sets from Europe deliver comparable results at different scales. Diffuse Pb contamination in surface soil is estimated to be <0.5 mg/kg for Australia, 1-3 mg/kg for Europe, and 1-2 mg/kg, or at least <5 mg/kg, for the U.S.A. The analysis presented here also allows recognition of local contamination sources and can be used to efficiently monitor diffuse contamination at the continental to regional scale.

Characterization of wet aggregate stability of soils by ¹H-NMR relaxometry.

PubMed

Buchmann, C; Meyer, M; Schaumann, G E

2015-09-01

For the assessment of soil structural stability against hydraulic stress, wet sieving or constant head permeability tests are typically used but rather limited in their intrinsic information value. The multiple applications of several tests is the only possibility to assess important processes and mechanisms during soil aggregate breakdown, e.g. the influences of soil fragment release or differential swelling on the porous systems of soils or soil aggregate columns. Consequently, the development of new techniques for a faster and more detailed wet aggregate stability assessment is required. (1)H nuclear magnetic resonance relaxometry ((1)H-NMR relaxometry) might provide these requirements because it has already been successfully applied on soils. We evaluated the potential of (1)H-NMR relaxometry for the assessment of wet aggregate stability of soils, with more detailed information on occurring mechanisms at the same time. Therefore, we conducted single wet sieving and constant head permeability tests on untreated and 1% polyacrylic acid-treated soil aggregates of different textures and organic matter contents, subsequently measured by (1)H-NMR relaxometry after percolation. The stability of the soil aggregates were mainly depending on their organic matter contents and the type of aggregate stabilization, whereby additional effects of clay swelling on the measured wet aggregate stability were identified by the transverse relaxation time (T2) distributions. Regression analyses showed that only the percentage of water stable aggregates could be determined accurately from percolated soil aggregate columns by (1)H-NMR relaxometry measurements. (1)H-NMR relaxometry seems a promising technique for wet aggregate stability measurements but should be further developed for nonpercolated aggregate columns and real soil samples. Copyright © 2014 John Wiley & Sons, Ltd.

Assessment of acute toxicity tests and rhizotron experiments to characterize lethal and sublethal control of soil-based pests.

PubMed

Agatz, Annika; Schumann, Mario M; French, Bryan W; Brown, Colin D; Vidal, Stefan

2018-03-24

Characterizing lethal and sublethal control of soil-based pests with plant protection products is particularly challenging due to the complex and dynamic interplay of the system components. Here, we present two types of studies: acute toxcity experiments (homogenous exposure of individuals in soil) and rhizotron experiments (heterogeneous exposure of individuals in soil) to investigate their ability to strengthen our understanding of mechanisms driving the effectivness of the plant protection product. Experiments were conducted using larvae of the western corn rootworm Diabrotica virgifera LeConte and three pesticide active ingredients: clothianidin (neonicotinoid), chlorpyrifos (organophosphate) and tefluthrin (pyrethroid). The order of compound concentrations needed to invoke a specific effect intensity (EC 50 values) within the acute toxicity tests was chlorpyrifos > tefluthrin > clothianidin. This order changed for the rhizotron experiments because application type, fate and transport of the compounds in the soil profile, and sublethal effects on larvae also influence their effectiveness in controlling larval feeding on corn roots. Beyond the pure measurement of efficacy through observing relative changes in plant injury to control plants, the tests generate mechanistic understanding for drivers of efficacy apart from acute toxicity. The experiments have the potential to enhance efficacy testing and product development, and might be useful tools for assessing resistance development in the future. © 2018 Society of Chemical Industry. © 2018 Society of Chemical Industry.

[Classification of Priority Area for Soil Environmental Protection Around Water Sources: Method Proposed and Case Demonstration].

PubMed

Li, Lei; Wang, Tie-yu; Wang, Xiaojun; Xiao, Rong-bo; Li, Qi-feng; Peng, Chi; Han, Cun-liang

2016-04-15

Based on comprehensive consideration of soil environmental quality, pollution status of river, environmental vulnerability and the stress of pollution sources, a technical method was established for classification of priority area of soil environmental protection around the river-style water sources. Shunde channel as an important drinking water sources of Foshan City, Guangdong province, was studied as a case, of which the classification evaluation system was set up. In detail, several evaluation factors were selected according to the local conditions of nature, society and economy, including the pollution degree of heavy metals in soil and sediment, soil characteristics, groundwater sensitivity, vegetation coverage, the type and location of pollution sources. Data information was mainly obtained by means of field survey, sampling analysis, and remote sensing interpretation. Afterwards, Analytical Hierarchy Process (AHP) was adopted to decide the weight of each factor. The basic spatial data layers were set up respectively and overlaid based on the weighted summation assessment model in Geographical Information System (GIS), resulting in a classification map of soil environmental protection level in priority area of Shunde channel. Accordingly, the area was classified to three levels named as polluted zone, risky zone and safe zone, which respectively accounted for 6.37%, 60.90% and 32.73% of the whole study area. Polluted zone and risky zone were mainly distributed in Lecong, Longjiang and Leliu towns, with pollutants mainly resulted from the long-term development of aquaculture and the industries containing furniture, plastic constructional materials and textile and clothing. In accordance with the main pollution sources of soil, targeted and differentiated strategies were put forward. The newly established evaluation method could be referenced for the protection and sustainable utilization of soil environment around the water sources.

A Study of Soil and Duricrust Models for Mars

NASA Astrophysics Data System (ADS)

Bishop, J. L.

2001-03-01

Analysis of soil and duricrust formation mechanisms on Mars. Soil analog mixtures have been prepared, characterized and tested through wet/dry cycling experiments; results are compared with Mars Pathfinder soil data (spectral, chemical and magnetic).

Monitoring the bio-stimulation of hydrocarbon-contaminated soils by measurements of soil electrical properties, and CO2 content and its 13C/12C isotopic signature

NASA Astrophysics Data System (ADS)

Noel, C.; Gourry, J.; Ignatiadis, I.; Colombano, S.; Dictor, M.; Guimbaud, C.; Chartier, M.; Dumestre, A.; Dehez, S.; Naudet, V.

2013-12-01

Hydrocarbon contaminated soils represent an environmental issue as it impacts on ecosystems and aquifers. Where significant subsurface heterogeneity exists, conventional intrusive investigations and groundwater sampling can be insufficient to obtain a robust monitoring of hydrocarbon contaminants, as the information they provide is restricted to vertical profiles at discrete locations, with no information between sampling points. In order to obtain wider information in space volume on subsurface modifications, complementary methods can be used like geophysics. Among geophysical methods, geoelectrical techniques such as electrical resistivity (ER) and induced polarization (IP) seem the more promising, especially to study the effects of biodegradation processes. Laboratory and field geoelectrical experiments to characterize soils contaminated by oil products have shown that mature hydrocarbon-contaminated soils are characterized by enhanced electrical conductivity although hydrocarbons are electrically resistive. This high bulk conductivity is due to bacterial impacts on geological media, resulting in changes in the chemical and physical properties and thus, to the geophysical properties of the ground. Moreover, microbial activity induced CO2 production and isotopic deviation of carbon. Indeed, produced CO2 will reflect the pollutant isotopic signature. Thus, the ratio δ13C(CO2) will come closer to δ13C(hydrocarbon). BIOPHY, project supported by the French National Research Agency (ANR), proposes to use electrical methods and gas analyses to develop an operational and non-destructive method for monitoring in situ biodegradation of hydrocarbons in order to optimize soil treatment. Demonstration field is located in the South of Paris (France), where liquid fuels (gasoline and diesel) leaked from some tanks in 1997. In order to stimulate biodegradation, a trench has been dug to supply oxygen to the water table and thus stimulate aerobic metabolic bioprocesses. ER and

Soil Organic Matter Stabilization via Mineral Interactions in Forest Soils with Varying Saturation Frequency

NASA Astrophysics Data System (ADS)

Possinger, A. R.; Inagaki, T.; Bailey, S. W.; Kogel-Knabner, I.; Lehmann, J.

2017-12-01

Soil carbon (C) interaction with minerals and metals through surface adsorption and co-precipitation processes is important for soil organic C (SOC) stabilization. Co-precipitation (i.e., the incorporation of C as an "impurity" in metal precipitates as they form) may increase the potential quantity of mineral-associated C per unit mineral surface compared to surface adsorption: a potentially important and as yet unaccounted for mechanism of C stabilization in soil. However, chemical, physical, and biological characterization of co-precipitated SOM as such in natural soils is limited, and the relative persistence of co-precipitated C is unknown, particularly under dynamic environmental conditions. To better understand the relationships between SOM stabilization via organometallic co-precipitation and environmental variables, this study compares mineral-SOM characteristics across a forest soil (Spodosol) hydrological gradient with expected differences in co-precipitation of SOM with iron (Fe) and aluminum (Al) due to variable saturation frequency. Soils were collected from a steep, well-drained forest soil transect with low, medium, and high frequency of water table intrusion into surface soils (Hubbard Brook Experimental Forest, Woodstock, NH). Lower saturation frequency soils generally had higher C content, C/Fe, C/Al, and other indicators of co-precipitation interactions resulting from SOM complexation, transport, and precipitation, an important process of Spodosol formation. Preliminary Fe X-ray Absorption Spectroscopic (XAS) characterization of SOM and metal chemistry in low frequency profiles suggest co-precipitation of SOM in the fine fraction (<20 µm). Short-term (10d) aerobic incubation of high and low saturation frequency soils showed greater SOC mineralization per unit soil C for low saturation frequency (i.e., higher co-precipitation) soils; however, increased mineralization may be attributed to non-mineral associated fractions of SOM. Further work to

Index for characterizing post-fire soil environments in temperate coniferous forests

USGS Publications Warehouse

Jain, Theresa B.; Pilliod, David S.; Graham, Russell T.; Lentile, Leigh B.; Sandquist, Jonathan E.

2012-01-01

Many scientists and managers have an interest in describing the environment following a fire to understand the effects on soil productivity, vegetation growth, and wildlife habitat, but little research has focused on the scientific rationale for classifying the post-fire environment. We developed an empirically-grounded soil post-fire index (PFI) based on available science and ecological thresholds. Using over 50 literature sources, we identified a minimum of five broad categories of post-fire outcomes: (a) unburned, (b) abundant surface organic matter ( > 85% surface organic matter), (c) moderate amount of surface organic matter ( ≥ 40 through 85%), (d) small amounts of surface organic matter ( < 40%), and (e) absence of surface organic matter (no organic matter left). We then subdivided each broad category on the basis of post-fire mineral soil colors providing a more fine-tuned post-fire soil index. We related each PFI category to characteristics such as soil temperature and duration of heating during fire, and physical, chemical, and biological responses. Classifying or describing post-fire soil conditions consistently will improve interpretations of fire effects research and facilitate communication of potential responses or outcomes (e.g., erosion potential) from fires of varying severities.

Hyperfine and radiological characterization of soils of the province of Buenos Aires, Argentina

NASA Astrophysics Data System (ADS)

Montes, M. L.; Taylor, M. A.; Mercader, R. C.; Sives, F. R.; Desimoni, J.

2010-03-01

The depth profile concentration of both natural and anthropogenic gamma-ray-emitter nuclides were determined in soil samples collected in an area located at 34° 54.452' S, 58° 8.365' W, down to 50 cm in depth, using an hyper-pure Ge spectrometer. The soil samples were also characterized by means of Mössbauer spectrometry and X-ray diffraction. The activities of 238U and 232Th natural chains remain constant in depth at 41 Bq/kg and 46 Bq/kg, respectively, while the 40K activity increases from 531 Bq/kg to 618 Bq/kg between 2.5 cm y 25.5 cm of depth. The only anthropogenic detected nuclide is 137Cs, whose activity changes form 1.4 Bq/kg to values lower than the detection limit (LD) for depths below 25 cm, exhibiting a maximum at 10 cm beneath the surface. The Mössbauer spectra show two magnetic sextets associated with α-Fe2O3 and Fe3O4, as well as two Fe+3 Fe+2 doublets, probably originated in octahedral and tetrahedral sites of paramagnetic phases. The Fe3+ paramagnetic signal relative fraction increases up to 82% at the expense of the α-Fe2O3 one when de depth increases. No correlation between Fe3O4 and the 137Cs was identificated.

Characterization of diverse 2,4-dichlorophenoxyacetic acid-degradative plasmids isolated from soil by complementation.

PubMed Central

Top, E M; Holben, W E; Forney, L J

1995-01-01

The diversity of 2,4-dichlorophenoxyacetic acid (2,4-D)-degradative plasmids in the microbial community of an agricultural soil was examined by complementation. This technique involved mixing a suitable Alcaligenes eutrophus (Rifr) recipient strain with the indigenous microbial populations extracted from soil. After incubation of this mixture, Rifr recipient strains which grow with 2,4-D as the only C source were selected. Two A. eutrophus strains were used as recipients: JMP228 (2,4-D-), which was previously derived from A. eutrophus JMP134 by curing of the 2,4-D-degradative plasmid pJP4, and JMP228 carrying pBH501aE (a plasmid derived from pJP4 by deletion of a large part of the tfdA gene which encodes the first step in the mineralization of 2,4-D). By using agricultural soil that had been treated with 2,4-D for several years, transconjugants were obtained with both recipients. However, when untreated control soil was used, no transconjugants were isolated. The various transconjugants had plasmids with seven different EcoRI restriction patterns. The corresponding plasmids are designated pEMT1 to pEMT7. Unlike pJP4, pEMT1 appeared not to be an IncP1 plasmid, but all the others (pEMT2 to pEMT7) belong to the IncP1 group. Hybridization with individual probes for the tfdA to tfdF genes of pJP4 demonstrated that all plasmids showed high degrees of homology to the tfdA gene. Only pEMT1 showed a high degree of homology to tfdB, tfdC, tfdD, tfdE, and tfdF, while the others showed only moderate degrees of homology to tfdB and low degrees of homology to tfdC.(ABSTRACT TRUNCATED AT 250 WORDS) PMID:7646006

Geochemical characterization of soils of the eastern coast of the Northern Sakhalin Lowland

NASA Astrophysics Data System (ADS)

Zharikova, E. A.

2017-01-01

Concentrations of heavy metals (HMs) were determined in soils of the eastern coast of the Northern Sakhalin Lowland. The total contents of HMs and their distribution in the studied soils differed from those in the world soils. Thus, barium and mercury concentrations exceeded clarke values for the world soils. The reserves of mobile forms of microelements were found to be low. Significant biogenic accumulation in organic soil horizons in the process of soil formation was found for copper, arsenic, and barium.

Soil organic carbon distribution in roadside soils of Singapore.

PubMed

Ghosh, Subhadip; Scharenbroch, Bryant C; Ow, Lai Fern

2016-12-01

Soil is the largest pool of organic carbon in terrestrial systems and plays a key role in carbon cycle. Global population living in urban areas are increasing substantially; however, the effects of urbanization on soil carbon storage and distribution are largely unknown. Here, we characterized the soil organic carbon (SOC) in roadside soils across the city-state of Singapore. We tested three hypotheses that SOC contents (concentration and density) in Singapore would be positively related to aboveground tree biomass, soil microbial biomass and land-use patterns. Overall mean SOC concentrations and densities (0-100 cm) of Singapore's roadside soils were 29 g kg -1 (4-106 g kg -1 ) and 11 kg m -2 (1.1-42.5 kg m -2 ) with median values of 26 g kg -1 and 10 kg m -2 , respectively. There was significantly higher concentration of organic carbon (10.3 g kg -1 ) in the top 0-30 cm soil depth compared to the deeper (30-50 cm, and 50-100 cm) soil depths. Singapore's roadside soils represent 4% of Singapore's land, but store 2.9 million Mg C (estimated range of 0.3-11 million Mg C). This amount of SOC is equivalent to 25% of annual anthropogenic C emissions in Singapore. Soil organic C contents in Singapore's soils were not related to aboveground vegetation or soil microbial biomass, whereas land-use patterns to best explain variance in SOC in Singapore's roadside soils. We found SOC in Singapore's roadside soils to be inversely related to urbanization. We conclude that high SOC in Singapore roadside soils are probably due to management, such as specifications of high quality top-soil, high use of irrigation and fertilization and also due to an optimal climate promoting rapid growth and biological activity. Copyright © 2016 Elsevier Ltd. All rights reserved.

Effects of Long-term Conservation Tillage on Soil Nutrients in Sloping Fields in Regions Characterized by Water and Wind Erosion

NASA Astrophysics Data System (ADS)

Tan, Chunjian; Cao, Xue; Yuan, Shuai; Wang, Weiyu; Feng, Yongzhong; Qiao, Bo

2015-12-01

Conservation tillage is commonly used in regions affected by water and wind erosion. To understand the effects of conservation tillage on soil nutrients and yield, a long-term experiment was set up in a region affected by water and wind erosion on the Loess Plateau. The treatments used were traditional tillage (CK), no tillage (NT), straw mulching (SM), plastic-film mulching (PM), ridging and plastic-film mulching (RPM) and intercropping (In). Our results demonstrate that the available nutrients in soils subjected to non-traditional tillage treatments decreased during the first several years and then remained stable over the last several years of the experiment. The soil organic matter and total nitrogen content increased gradually over 6 years in all treatments except CK. The nutrient content of soils subjected to conservative tillage methods, such as NT and SM, were significantly higher than those in soils under the CK treatment. Straw mulching and film mulching effectively reduced an observed decrease in soybean yield. Over the final 6 years of the experiment, soybean yields followed the trend RPM > PM > SM > NT > CK > In. This trend has implications for controlling soil erosion and preventing non-point source pollution in sloping fields by sacrificing some food production.

Biologically Active Organic Matter in Soils of European Russia

NASA Astrophysics Data System (ADS)

Semenov, V. M.; Kogut, B. M.; Zinyakova, N. B.; Masyutenko, N. P.; Malyukova, L. S.; Lebedeva, T. N.; Tulina, A. S.

2018-04-01

Experimental and literature data on the contents and stocks of active organic matter in 200 soil samples from the forest-tundra, southern-taiga, deciduous-forest, forest-steppe, dry-steppe, semidesert, and subtropical zones have been generalized. Natural lands, agrocenoses, treatments of long-term field experiments (bare fallow, unfertilized and fertilized crop rotations, perennial plantations), and different layers of soil profile are presented. Sphagnum peat and humus-peat soil in the tundra and forest-tundra zones are characterized by a very high content of active organic matter (300-600 mg C/100 g). Among the zonal soils, the content of active organic matter increases from the medium (75-150 mg C/100 g) to the high (150-300 mg C/100 g) level when going from soddy-podzolic soil to gray forest and dark-gray forest soils and then to leached chernozem. In the series from typical chernozem to ordinary and southern chernozem and chestnut and brown semidesert soils, a decrease in the content of active organic matter to the low (35-75 mg C/100 g) and very low (<35 mg C/100 g) levels is observed. Acid brown forest soil in the subtropical zone is characterized by a medium supply with active organic matter. Most arable soils are mainly characterized by low or very low contents of active organic matter. In the upper layers of soils, active organic matter makes up 1.2-11.1% of total Corg. The profile distribution of active organic matter in the studied soils coincides with that of Corg: their contents appreciably decrease with depth, except for brown semidesert soil. The stocks of active organic matter vary from 0.4 to 5.4 t/ha in the layer of 0-20 cm and from 1.0 to 12.4/ha in the layer of 0-50 cm of different soil types.

Improving the phytoremediation of heavy metals contaminated soil by use of sewage sludge

PubMed Central

Placek, Agnieszka; Grobelak, Anna; Kacprzak, Malgorzata

2016-01-01

ABSTRACT Sewage sludge, in particular from the food industry, is characterized by fertilizing properties, due to the high content of organic matter and nutrients. The application of sewage sludge causes an improvement of soil parameters as well as increase in cation exchange capacity, and thus stronger binding of cations in the soil environment, which involves the immobilization of nutrients and greater resistance to contamination. In a field experiment sewage sludge has been used as an additive to the soil supporting the phytoremediation process of land contaminated with heavy metals (Cd, Zn, and Pb) using trees species: Scots pine (Pinus silvestris L.), Norway spruce (Picea abies L.), and oak (Quercus robur L.). The aim of the research was to determine how the application of sewage sludge into the soil surface improves the phytoremediation process. The conducted field experiment demonstrated that selected trees like Scots pine and Norway spruce, because of its excellent adaptability, can be used in the remediation of soil. Oak should not be used in the phytoremediation process of soils contaminated with high concentrations of trace elements in the soil, because a significant amount of heavy metals was accumulated in the leaves of oak causing a risk of recontamination. PMID:26368503

Characterizing potential water quality impacts from soils treated with dust suppressants.

PubMed

Beighley, R Edward; He, Yiping; Valdes, Julio R

2009-01-01

Two separate laboratory experiment series, surface runoff and steady-state seepage, were performed to determine if dust suppressant products can be applied to soils with an expected minimal to no negative impact on water quality. The experiments were designed to mimic arid field conditions and used two soils (clayey and sandy) and six different dust suppressants. The two experiments consisted of: (i) simulated rainfall (intensities of 18, 33, or 61 mm h(-1)) and associated runoff from soil trays at a surface slope of 33%; and (ii) steady-state, constant head seepage through soil columns. Both experiment series involved two product application scenarios and three application ages (i.e., to account for degradation effects) for a total of 126 surface runoff and 80 column experiments. One composite effluent sample was collected from each experiment and analyzed for pH, electrical conductivity, total suspended solids (TSS), total dissolved solids, dissolved oxygen, total organic carbon, nitrate, nitrite, and phosphate. Paired t tests at 1 and 5% levels of significance and project specific data quality objectives are used to compare water quality parameters from treated and untreated soils. Overall, the results from this laboratory scale study suggest that the studied dust suppressants have minimal potential for adverse impacts to selected water quality parameters. The primary impacts were increased TSS for two synthetic products from the surface runoff experiments on both soils. The increase in TSS was not expected based on previous studies and may be attributed to this study's focus on simulating real-world soil agitation/movement at an active construction site subjected to rough grading.

Aspen Increase Soil Moisture, Nutrients, Organic Matter and Respiration in Rocky Mountain Forest Communities

PubMed Central

Buck, Joshua R.; St. Clair, Samuel B.

2012-01-01

Development and change in forest communities are strongly influenced by plant-soil interactions. The primary objective of this paper was to identify how forest soil characteristics vary along gradients of forest community composition in aspen-conifer forests to better understand the relationship between forest vegetation characteristics and soil processes. The study was conducted on the Fishlake National Forest, Utah, USA. Soil measurements were collected in adjacent forest stands that were characterized as aspen dominated, mixed, conifer dominated or open meadow, which includes the range of vegetation conditions that exist in seral aspen forests. Soil chemistry, moisture content, respiration, and temperature were measured. There was a consistent trend in which aspen stands demonstrated higher mean soil nutrient concentrations than mixed and conifer dominated stands and meadows. Specifically, total N, NO3 and NH4 were nearly two-fold higher in soil underneath aspen dominated stands. Soil moisture was significantly higher in aspen stands and meadows in early summer but converged to similar levels as those found in mixed and conifer dominated stands in late summer. Soil respiration was significantly higher in aspen stands than conifer stands or meadows throughout the summer. These results suggest that changes in disturbance regimes or climate scenarios that favor conifer expansion or loss of aspen will decrease soil resource availability, which is likely to have important feedbacks on plant community development. PMID:23285012

Underestimation of boreal soil carbon stocks by mathematical soil carbon models linked to soil nutrient status

NASA Astrophysics Data System (ADS)

Ťupek, Boris; Ortiz, Carina A.; Hashimoto, Shoji; Stendahl, Johan; Dahlgren, Jonas; Karltun, Erik; Lehtonen, Aleksi

2016-08-01

Inaccurate estimate of the largest terrestrial carbon pool, soil organic carbon (SOC) stock, is the major source of uncertainty in simulating feedback of climate warming on ecosystem-atmosphere carbon dioxide exchange by process-based ecosystem and soil carbon models. Although the models need to simplify complex environmental processes of soil carbon sequestration, in a large mosaic of environments a missing key driver could lead to a modeling bias in predictions of SOC stock change.We aimed to evaluate SOC stock estimates of process-based models (Yasso07, Q, and CENTURY soil sub-model v4) against a massive Swedish forest soil inventory data set (3230 samples) organized by a recursive partitioning method into distinct soil groups with underlying SOC stock development linked to physicochemical conditions.For two-thirds of measurements all models predicted accurate SOC stock levels regardless of the detail of input data, e.g., whether they ignored or included soil properties. However, in fertile sites with high N deposition, high cation exchange capacity, or moderately increased soil water content, Yasso07 and Q models underestimated SOC stocks. In comparison to Yasso07 and Q, accounting for the site-specific soil characteristics (e. g. clay content and topsoil mineral N) by CENTURY improved SOC stock estimates for sites with high clay content, but not for sites with high N deposition.Our analysis suggested that the soils with poorly predicted SOC stocks, as characterized by the high nutrient status and well-sorted parent material, indeed have had other predominant drivers of SOC stabilization lacking in the models, presumably the mycorrhizal organic uptake and organo-mineral stabilization processes. Our results imply that the role of soil nutrient status as regulator of organic matter mineralization has to be re-evaluated, since correct SOC stocks are decisive for predicting future SOC change and soil CO2 efflux.

Evaluation on expansive performance of the expansive soil using electrical responses

NASA Astrophysics Data System (ADS)

Chu, Ya; Liu, Songyu; Bate, Bate; Xu, Lei

2018-01-01

Light structures, such as highways and railroads, built on expansive soils are prone to damages from the swelling of their underlain soil layers. Considerable amount of research has been conducted to characterize the swelling properties of expansive soils. Current swell characterization models, however, are limited by lack of standardized tests. Electrical methods are non-destructive, and are faster and less expensive than the traditional geotechnical methods. Therefore, geo-electrical methods are attractive for defining soil characteristics, including the swelling behavior. In this study, comprehensive laboratory experiments were undertaken to measure the free swelling and electrical resistivity of the mixtures of commercial kaolinite and bentonite. The electrical conductivity of kaolinite-bentonite mixtures was measured by a self-developed four-electrode soil resistivity box. Increasing the free swelling rate of the kaolinite-bentonite mixtures (0.72 to 1 of porosity of soils samples) led to a reduction in the electrical resistivity and an increase in conductivity. A unique relationship between free swelling rate and normalized surface conductivity was constructed for expensive soils by eliminating influences of porosity and m exponent. Therefore, electrical response measurement can be used to characterize the free swelling rate of expensive soils.

Soil moisture and properties estimation by assimilating soil temperatures using particle batch smoother: A new perspective for DTS

NASA Astrophysics Data System (ADS)

Dong, J.; Steele-Dunne, S. C.; Ochsner, T. E.; Van De Giesen, N.

2015-12-01

Soil moisture, hydraulic and thermal properties are critical for understanding the soil surface energy balance and hydrological processes. Here, we will discuss the potential of using soil temperature observations from Distributed Temperature Sensing (DTS) to investigate the spatial variability of soil moisture and soil properties. With DTS soil temperature can be measured with high resolution (spatial <1m, and temporal < 1min) in cables up to kilometers in length. Soil temperature evolution is primarily controlled by the soil thermal properties, and the energy balance at the soil surface. Hence, soil moisture, which affects both soil thermal properties and the energy that participates the evaporation process, is strongly correlated to the soil temperatures. In addition, the dynamics of the soil moisture is determined by the soil hydraulic properties.Here we will demonstrate that soil moisture, hydraulic and thermal properties can be estimated by assimilating observed soil temperature at shallow depths using the Particle Batch Smoother (PBS). The PBS can be considered as an extension of the particle filter, which allows us to infer soil moisture and soil properties using the dynamics of soil temperature within a batch window. Both synthetic and real field data will be used to demonstrate the robustness of this approach. We will show that the proposed method is shown to be able to handle different sources of uncertainties, which may provide a new view of using DTS observations to estimate sub-meter resolution soil moisture and properties for remote sensing product validation.

Characterization of the resistome in manure, soil and wastewater from dairy and beef production systems.

PubMed

Noyes, Noelle R; Yang, Xiang; Linke, Lyndsey M; Magnuson, Roberta J; Cook, Shaun R; Zaheer, Rahat; Yang, Hua; Woerner, Dale R; Geornaras, Ifigenia; McArt, Jessica A; Gow, Sheryl P; Ruiz, Jaime; Jones, Kenneth L; Boucher, Christina A; McAllister, Tim A; Belk, Keith E; Morley, Paul S

2016-04-20

It has been proposed that livestock production effluents such as wastewater, airborne dust and manure increase the density of antimicrobial resistant bacteria and genes in the environment. The public health risk posed by this proposed outcome has been difficult to quantify using traditional microbiological approaches. We utilized shotgun metagenomics to provide a first description of the resistome of North American dairy and beef production effluents, and identify factors that significantly impact this resistome. We identified 34 mechanisms of antimicrobial drug resistance within 34 soil, manure and wastewater samples from feedlot, ranch and dairy operations. The majority of resistance-associated sequences found in all samples belonged to tetracycline resistance mechanisms. We found that the ranch samples contained significantly fewer resistance mechanisms than dairy and feedlot samples, and that the resistome of dairy operations differed significantly from that of feedlots. The resistome in soil, manure and wastewater differed, suggesting that management of these effluents should be tailored appropriately. By providing a baseline of the cattle production waste resistome, this study represents a solid foundation for future efforts to characterize and quantify the public health risk posed by livestock effluents.

Characterization of the resistome in manure, soil and wastewater from dairy and beef production systems

PubMed Central

Noyes, Noelle R.; Yang, Xiang; Linke, Lyndsey M.; Magnuson, Roberta J.; Cook, Shaun R.; Zaheer, Rahat; Yang, Hua; Woerner, Dale R.; Geornaras, Ifigenia; McArt, Jessica A.; Gow, Sheryl P.; Ruiz, Jaime; Jones, Kenneth L.; Boucher, Christina A.; McAllister, Tim A.; Belk, Keith E.; Morley, Paul S.

2016-01-01

It has been proposed that livestock production effluents such as wastewater, airborne dust and manure increase the density of antimicrobial resistant bacteria and genes in the environment. The public health risk posed by this proposed outcome has been difficult to quantify using traditional microbiological approaches. We utilized shotgun metagenomics to provide a first description of the resistome of North American dairy and beef production effluents, and identify factors that significantly impact this resistome. We identified 34 mechanisms of antimicrobial drug resistance within 34 soil, manure and wastewater samples from feedlot, ranch and dairy operations. The majority of resistance-associated sequences found in all samples belonged to tetracycline resistance mechanisms. We found that the ranch samples contained significantly fewer resistance mechanisms than dairy and feedlot samples, and that the resistome of dairy operations differed significantly from that of feedlots. The resistome in soil, manure and wastewater differed, suggesting that management of these effluents should be tailored appropriately. By providing a baseline of the cattle production waste resistome, this study represents a solid foundation for future efforts to characterize and quantify the public health risk posed by livestock effluents. PMID:27095377

Geochemical indicators and characterization of soil water repellence in three dominant ecosystems of Western Australia

NASA Astrophysics Data System (ADS)

Muñoz-Rojas, Miriam; Jiménez-Morillo, Nicasio T.; Jordan, Antonio; Zavala, Lorena M.; Stevens, Jason; González-Pérez, Jose Antonio

2016-04-01

H and electrical conductivity (EC) were determined in deionised water (1:2.5 and 1:5 w/v, respectively). The structural characterization of soil organic matter (SOM) was analysed by direct analytical pyrolysis (Py-GC/MS) performed at 500 °C (González-Vila et al., 2009). Only chromatogram peaks with an area higher than 0.2 % were identified and used to obtain the relative abundance of main chemical families in each vegetation cover. Results Our results show that soil water repellence is strongly correlated to microbial activity, pH and electrical conductivity. After Py-GC/MS analysis, soil organic matter in the Banksia woodland and the coastal dune showed a high heterogeneity. In the Banksia woodland two different patterns were observed. Samples under Banksia spp. showed a SOM with clear signs of altereation (humified) that included a high contribution of stable families like unspecific aromatic compounds and alkane/alkene pairs whereas under Eucalyptus spp. showed a less altered SOM with a high relative contribution from lignocellulose (lignin and carbohydrates), together with a low relative content of recalcitrant families. However in the soil samples from coastal dunes a very similar SOM chemical composition was found in all cases. The dominant family was unspecific aromatic compounds (>30%), followed by alkane/alkene pairs and a high relative contribution from N bearing peptide compounds. This, together with a low relative amount of carbohydrate and lignin derived (methoxyphenols) compounds points to a SOM that undergoes great alteration processes, possible because of high turn-over rates. Very low contents of SOM were found in the Pilbara system, under Py-GC/MS detection levels, and therefore it was not possible to establish its chemical composition. A principal components analysis (PCA) axes based on the relative abundances of chemical families of compounds released after SOM pyrolysis (70.9 % of total variation explained in the two first axes) indicate that

Hydrogeologic characterization of an arid zone Radioactive Waste Management Site

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ginanni, J.M.; O`Neill, L.J.; Hammermeister, D.P.

1994-06-01

An in-depth subsurface site characterization and monitoring program for the soil water migration pathway has been planned, implemented, and completed to satisfy data requirements for a waiver from groundwater monitoring, for an exemption from liner leachate collections systems, and for different regulatory driven performance assessments. A traditional scientific approach has been taken to focus characterization and monitoring efforts. This involved developing a conceptual model of the hydrogeologic system and defining and testing hypotheses about this model. Specific hypotheses tested included: that the system was hydrologically heterogenous and anisotropic, and that recharge was very low or negligible. Mineralogical, physical, and hydrologicmore » data collected to test hypotheses has shown the hydrologic system to be remarkably homogenous and isotropic rather than heterogenous and anisotropic. Both hydrodynamic and environmental tracer approaches for estimating recharge have led to the conclusion that recharge from the Area 5 RWMS is not occurring in the upper region of the vadose zone, and that recharge at depth is extremely small or negligible. This demonstration of ``no migration of hazardous constituents to the water table satisfies a key requirement for both the groundwater monitoring waiver and the exemption from liner leachate collection systems. Data obtained from testing hypotheses concerning the soil water migration pathway have been used to refine the conceptual model of the hydrogeologic system of the site. These data suggest that the soil gas and atmospheric air pathways may be more important for transporting contaminants to the accessible environment than the soil water pathway. New hypotheses have been developed about these pathways, and characterization and monitoring activities designed to collect data to test these hypotheses.« less

Laboratory-Scale Demonstration Using Dilute Ammonia Gas-Induced Alkaline Hydrolysis of Soil Contaminants (Chlorinated Propanes and Explosives)

DTIC Science & Technology

2016-06-01

Hydrolysis of Soil Contaminants (Chlorinated Propanes and Explosives) En vi ro nm en ta l L ab or at or y Victor F. Medina, Scott A. Waisner, Charles...Using Dilute Ammonia Gas-Induced Alkaline Hydrolysis of Soil Contaminants (Chlorinated Propanes and Explosives) Victor F. Medina, Scott A. Waisner...hydrolysis. This project explored the use of ammonia gas to raise soil pH in order to stimulate alkaline hydrolysis. When ammonia gas dissolves in water

Soil Parameters Drive the Structure, Diversity and Metabolic Potentials of the Bacterial Communities Across Temperate Beech Forest Soil Sequences.

PubMed

Jeanbille, M; Buée, M; Bach, C; Cébron, A; Frey-Klett, P; Turpault, M P; Uroz, S

2016-02-01

Soil and climatic conditions as well as land cover and land management have been shown to strongly impact the structure and diversity of the soil bacterial communities. Here, we addressed under a same land cover the potential effect of the edaphic parameters on the soil bacterial communities, excluding potential confounding factors as climate. To do this, we characterized two natural soil sequences occurring in the Montiers experimental site. Spatially distant soil samples were collected below Fagus sylvatica tree stands to assess the effect of soil sequences on the edaphic parameters, as well as the structure and diversity of the bacterial communities. Soil analyses revealed that the two soil sequences were characterized by higher pH and calcium and magnesium contents in the lower plots. Metabolic assays based on Biolog Ecoplates highlighted higher intensity and richness in usable carbon substrates in the lower plots than in the middle and upper plots, although no significant differences occurred in the abundance of bacterial and fungal communities along the soil sequences as assessed using quantitative PCR. Pyrosequencing analysis of 16S ribosomal RNA (rRNA) gene amplicons revealed that Proteobacteria, Acidobacteria and Bacteroidetes were the most abundantly represented phyla. Acidobacteria, Proteobacteria and Chlamydiae were significantly enriched in the most acidic and nutrient-poor soils compared to the Bacteroidetes, which were significantly enriched in the soils presenting the higher pH and nutrient contents. Interestingly, aluminium, nitrogen, calcium, nutrient availability and pH appeared to be the best predictors of the bacterial community structures along the soil sequences.

Estimation of surface soil moisture and roughness from multi-angular ASAR imagery in the Watershed Allied Telemetry Experimental Research (WATER)

NASA Astrophysics Data System (ADS)

Wang, S. G.; Li, X.; Han, X. J.; Jin, R.

2010-06-01

Radar remote sensing has demonstrated its applicability to the retrieval of basin-scale soil moisture. The mechanism of radar backscattering from soils is complicated and strongly influenced by surface roughness. Furthermore, retrieval of soil moisture using AIEM-like models is a classic example of the underdetermined problem due to a lack of credible known soil roughness distributions at a regional scale. Characterization of this roughness is therefore crucial for an accurate derivation of soil moisture based on backscattering models. This study aims to directly obtain surface roughness information along with soil moisture from multi-angular ASAR images. The method first used a semi-empirical relationship that connects the roughness slope (Zs) and the difference in backscattering coefficient (Δσ) from ASAR data in different incidence angles, in combination with an optimal calibration form consisting of two roughness parameters (the standard deviation of surface height and the correlation length), to estimate the roughness parameters. The deduced surface roughness was then used in the AIEM model for the retrieval of soil moisture. An evaluation of the proposed method was performed in a grassland site in the middle stream of the Heihe River Basin, where the Watershed Allied Telemetry Experimental Research (WATER) was taken place. It has demonstrated that the method is feasible to achieve reliable estimation of soil water content. The key challenge to surface soil moisture retrieval is the presence of vegetation cover, which significantly impacts the estimates of surface roughness and soil moisture.

Rapid stabilization of thawing soils For enhanced vehicle mobility: a field demonstration project

DOT National Transportation Integrated Search

1999-02-01

Thawing soil presents a formidable challenge for vehicle operations cross-country and on unsurfaced roads. To mitigate the problem, a variety of stabilization techniques were evaluated for their suitability for rapid employment to enhance military ve...

Characterizing soil moisture and snow cover effects on boreal-arctic soil freeze/thaw dynamics and cold-season carbon emissions

NASA Astrophysics Data System (ADS)

Yi, Y.; Kimball, J. S.; Moghaddam, M.; Chen, R. H.; Reichle, R. H.; Oechel, W. C.; Zona, D.

2017-12-01

The contribution of cold season respiration to boreal-arctic carbon cycle and its potential feedbacks to climate change remain poorly quantified. Here, we developed an integrated modeling framework combining airborne low frequency (L+P-band) airborne radar retrievals and landscape level (≥1km) environmental observations from satellite optical and microwave sensors with a detailed permafrost carbon model to investigate underlying processes controlling soil freeze/thaw (FT) dynamics and cold season carbon emissions. The permafrost carbon model simulates the snow and soil thermal dynamics with soil water phase change included and accounts for soil carbon decomposition up to 3m below surface. Local-scale ( 50m) radar retrievals of active layer thickness (ALT), soil moisture and freeze/thaw (FT) status from NASA airborne UAVSAR and AirMOSS sensors are used to inform the model parameterizations of soil moisture effects on soil FT dynamics, and scaling properties of active layer processes. Both tower observed land-atmosphere fluxes and atmospheric CO2 measurements are used to evaluate the model processes controlling cold season carbon respiration, particularly the effects of snow cover and soil moisture on deep soil carbon emissions during the early cold season. Initial comparisons showed that the model can well capture the seasonality of cold season respiration in both tundra and boreal forest areas, with large emissions in late fall and early winter and gradually diminishing throughout the winter. Model sensitivity analyses are used to clarify how changes in soil thermodynamics at depth control the magnitude and seasonality of cold season respiration, and how a deeper unfrozen active layer with warming may contribute to changes in cold season respiration. Model outputs include ALT and regional carbon fluxes at 1-km resolution spanning recent satellite era (2001-present) across Alaska. These results will be used to quantify cold season respiration contributions to the