Detecting the role of individual species for overyielding in experimental grassland communities composed of potentially dominant species.

PubMed

Roscher, Christiane; Schumacher, Jens; Weisser, Wolfgang W; Schmid, Bernhard; Schulze, Ernst-Detlef

2007-12-01

Several studies have shown that the contribution of individual species to the positive relationship between species richness and community biomass production cannot be easily predicted from species monocultures. Here, we used a biodiversity experiment with a pool of nine potentially dominant grassland species to relate the species richness-productivity relationship to responses in density, size and aboveground allocation patterns of individual species. Aboveground community biomass increased strongly with the transition from monocultures to two-species mixtures but only slightly with the transition from two- to nine-species mixtures. Tripartite partitioning showed that the strong increase shown by the former was due to trait-independent complementarity effects, while the slight increase shown by the latter was due to dominance effects. Trait-dependent complementarity effects depended on species composition. Relative yield total (RYT) was greater than 1 (RYT>1) in mixtures but did not increase with species richness, which is consistent with the constant complementarity effect. The relative yield (RY) of only one species, Arrhenatherum elatius, continually increased with species richness, while those of the other species studied decreased with species richness or varied among different species compositions within richness levels. High observed/expected RYs (RYo/RYe>1) of individual species were mainly due to increased module densities, whereas low observed/expected RYs (RYo/RYe<1) were due to more pronounced decreases in module density (species with stoloniferous or creeping growth) or module size (species with clearly-defined plant individuals). The trade-off between module density and size, typical for plant populations under the law of constant final yield, was compensated among species. The positive trait-independent complementarity effect could be explained by an increase in community module density, which reached a maximum at low species richness. In contrast, the increasing dominance effect was attributable to the species-specific ability, in particular that of A. elatius, to increase module size, while intrinsic growth limitations led to a suppression of the remaining species in many mixtures.

Tree Species Composition and Harvest Intensity Affect Herbivore Density and Leaf Damage on Beech, Fagus sylvatica, in Different Landscape Contexts

PubMed Central

Mangels, Jule; Blüthgen, Nico; Frank, Kevin; Grassein, Fabrice; Hilpert, Andrea; Mody, Karsten

2015-01-01

Most forests are exposed to anthropogenic management activities that affect tree species composition and natural ecosystem processes. Changes in ecosystem processes such as herbivory depend on management intensity, and on regional environmental conditions and species pools. Whereas influences of specific forest management measures have already been addressed for different herbivore taxa on a local scale, studies considering effects of different aspects of forest management across different regions are rare. We assessed the influence of tree species composition and intensity of harvesting activities on arthropod herbivores and herbivore-related damage to beech trees, Fagus sylvatica, in 48 forest plots in three regions of Germany. We found that herbivore abundance and damage to beech trees differed between regions and that – despite the regional differences - density of tree-associated arthropod taxa and herbivore damage were consistently affected by tree species composition and harvest intensity. Specifically, overall herbivore damage to beech trees increased with increasing dominance of beech trees – suggesting the action of associational resistance processes – and decreased with harvest intensity. The density of leaf chewers and mines was positively related to leaf damage, and several arthropod groups responded to beech dominance and harvest intensity. The distribution of damage patterns was consistent with a vertical shift of herbivores to higher crown layers during the season and with higher beech dominance. By linking quantitative data on arthropod herbivore abundance and herbivory with tree species composition and harvesting activity in a wide variety of beech forests, our study helps to better understand the influence of forest management on interactions between a naturally dominant deciduous forest tree and arthropod herbivores. PMID:25938417

A regional assessment of white-tailed deer effects on plant invasion

PubMed Central

Mortensen, David A; Smithwick, Erica A H; Kalisz, Susan; McShea, William J; Bourg, Norman A; Parker, John D; Royo, Alejandro A; Abrams, Marc D; Apsley, David K; Blossey, Bernd; Boucher, Douglas H; Caraher, Kai L; DiTommaso, Antonio; Johnson, Sarah E; Masson, Robert; Nuzzo, Victoria A

2018-01-01

Abstract Herbivores can profoundly influence plant species assembly, including plant invasion, and resulting community composition. Population increases of native herbivores, e.g. white-tailed deer (Odocoileus virginianus), combined with burgeoning plant invasions raise concerns for native plant diversity and forest regeneration. While individual researchers typically test for the impact of deer on plant invasion at a few sites, the overarching influence of deer on plant invasion across regional scales is unclear. We tested the effects of deer on the abundance and diversity of introduced and native herbaceous and woody plants across 23 white-tailed deer research sites distributed across the east-central and north-eastern USA and representing a wide range of deer densities and invasive plant abundance and identity. Deer access/exclusion or deer population density did not affect introduced plant richness or community-level abundance. Native and total plant species richness, abundance (cover and stem density) and Shannon diversity were lower in deer-access vs. deer-exclusion plots. Among deer-access plots, native species richness, native and total cover, and Shannon diversity (cover) declined as deer density increased. Deer access increased the proportion of introduced species cover (but not of species richness or stem density). As deer density increased, the proportion of introduced species richness, cover and stem density all increased. Because absolute abundance of introduced plants was unaffected by deer, the increase in proportion of introduced plant abundance is likely an indirect effect of deer reducing native cover. Indicator species analysis revealed that deer access favoured three introduced plant species, including Alliaria petiolata and Microstegium vimineum, as well as four native plant species. In contrast, deer exclusion favoured three introduced plant species, including Lonicera japonica and Rosa multiflora, and 15 native plant species. Overall, native deer reduced community diversity, lowering native plant richness and abundance, and benefited certain invasive plants, suggesting pervasive impacts of this keystone herbivore on plant community composition and ecosystem services in native forests across broad swathes of the eastern USA. PMID:29340133

DOE Office of Scientific and Technical Information (OSTI.GOV)

Averill, Kristine M.; Mortensen, David A.; Smithwick, Erica A. H.

Herbivores can profoundly influence plant species assembly, including plant invasion, and resulting community composition. Population increases of native herbivores, e.g., white-tailed deer (Odocoileus virginianus), combined with burgeoning plant invasions raise concerns for native plant diversity and forest regeneration. While individual researchers typically test for the impact of deer on plant invasion at a few sites, the overarching influence of deer on plant invasion across regional scales is unclear. We tested the effects of deer on the abundance and diversity of introduced and native herbaceous and woody plants across 23 white-tailed deer research sites distributed across the east central and northeasternmore » United States and representing a wide range of deer densities and invasive plant abundance and identity. Deer access/exclusion or deer population density did not affect introduced plant richness or community-level abundance. Native and total plant species richness, abundance (cover and stem density), and Shannon diversity were lower in deer-access vs. deer-exclusion plots. Among deer access plots, native species richness, native and total cover, and Shannon diversity (cover) declined as deer density increased. Deer access increased the proportion of introduced species cover (but not of species richness or stem density). As deer density increased, the proportion of introduced species richness, cover, and stem density all increased. Because absolute abundance of introduced plants was unaffected by deer, the increase in proportion of introduced plant abundance is likely an indirect effect of deer reducing native cover. Indicator species analysis revealed that deer access favored three introduced plant species, including Alliaria petiolata and Microstegium vimineum, as well as four native plant species. In contrast, deer exclusion favored three introduced plant species, including Lonicera japonica and Rosa multiflora, and fifteen native plant species. Overall, native deer reduced community diversity, lowering native plant richness and abundance, and benefited certain invasive plants, suggesting pervasive impacts of this keystone herbivore on plant community composition and ecosystem services in native forests across broad swathes of the eastern US.« less

A regional assessment of white-tailed deer effects on plant invasion

DOE Office of Scientific and Technical Information (OSTI.GOV)

Averill, Kristine M.; Mortensen, David A.; Smithwick, Erica A. H.

Herbivores can profoundly influence plant species assembly, including plant invasion, and resulting community composition. Population increases of native herbivores, e.g., white-tailed deer ( Odocoileus virginianus), combined with burgeoning plant invasions raise concerns for native plant diversity and forest regeneration. While individual researchers typically test for the impact of deer on plant invasion at a few sites, the overarching influence of deer on plant invasion across regional scales is unclear. We tested the effects of deer on the abundance and diversity of introduced and native herbaceous and woody plants across 23 white-tailed deer research sites distributed across the east central andmore » northeastern United States and representing a wide range of deer densities and invasive plant abundance and identity. Deer access/exclusion or deer population density did not affect introduced plant richness or community-level abundance. Native and total plant species richness, abundance (cover and stem density), and Shannon diversity were lower in deer-access vs. deer-exclusion plots. Among deer access plots, native species richness, native and total cover, and Shannon diversity (cover) declined as deer density increased. Deer access increased the proportion of introduced species cover (but not of species richness or stem density). As deer density increased, the proportion of introduced species richness, cover, and stem density all increased. Because absolute abundance of introduced plants was unaffected by deer, the increase in proportion of introduced plant abundance is likely an indirect effect of deer reducing native cover. Indicator species analysis revealed that deer access favored three introduced plant species, including Alliaria petiolata and Microstegium vimineum, as well as four native plant species. In contrast, deer exclusion favored three introduced plant species, including Lonicera japonica and Rosa multiflora, and fifteen native plant species. Altogether, native deer reduced community diversity, lowering native plant richness and abundance, and benefited certain invasive plants, suggesting pervasive impacts of this keystone herbivore on plant community composition and ecosystem services in native forests across broad swathes of the eastern US.« less

A regional assessment of white-tailed deer effects on plant invasion

DOE PAGES

Averill, Kristine M.; Mortensen, David A.; Smithwick, Erica A. H.; ...

2017-12-07

Herbivores can profoundly influence plant species assembly, including plant invasion, and resulting community composition. Population increases of native herbivores, e.g., white-tailed deer ( Odocoileus virginianus), combined with burgeoning plant invasions raise concerns for native plant diversity and forest regeneration. While individual researchers typically test for the impact of deer on plant invasion at a few sites, the overarching influence of deer on plant invasion across regional scales is unclear. We tested the effects of deer on the abundance and diversity of introduced and native herbaceous and woody plants across 23 white-tailed deer research sites distributed across the east central andmore » northeastern United States and representing a wide range of deer densities and invasive plant abundance and identity. Deer access/exclusion or deer population density did not affect introduced plant richness or community-level abundance. Native and total plant species richness, abundance (cover and stem density), and Shannon diversity were lower in deer-access vs. deer-exclusion plots. Among deer access plots, native species richness, native and total cover, and Shannon diversity (cover) declined as deer density increased. Deer access increased the proportion of introduced species cover (but not of species richness or stem density). As deer density increased, the proportion of introduced species richness, cover, and stem density all increased. Because absolute abundance of introduced plants was unaffected by deer, the increase in proportion of introduced plant abundance is likely an indirect effect of deer reducing native cover. Indicator species analysis revealed that deer access favored three introduced plant species, including Alliaria petiolata and Microstegium vimineum, as well as four native plant species. In contrast, deer exclusion favored three introduced plant species, including Lonicera japonica and Rosa multiflora, and fifteen native plant species. Altogether, native deer reduced community diversity, lowering native plant richness and abundance, and benefited certain invasive plants, suggesting pervasive impacts of this keystone herbivore on plant community composition and ecosystem services in native forests across broad swathes of the eastern US.« less

Spatial and Temporal Dynamics of Flora in Forest, Grassland and Common Land Ecosystems of Western Chitwan, Nepal

PubMed Central

DANGOL, Dharma Raj; MAHARJAN, Keshav Lall

2013-01-01

This paper describes changes of species composition and population of flora in space and time in western Chitwan, Nepal. This paper also discusses on the changes in flora due to flood and human activities. To illustrate these changes, we used survey data collected from January to April of 1996, 2000, and 2007 from the Barandabhar forest, National Park forest and the forests along the Narayani River banks, grasslands of National Park and common lands of western Chitwan as a part of longitudinal study on “reciprocal relation of population and the environment”. From these data, density values were calculated to analyze spatial and temporal changes in flora species composition and population. We also noted the changes of top species in time and space in due course of time. If the species and its rank not changed, their densities (population) values of flora species changed. We found that changes in species composition, population, appearance or disappearance of flora from a particular space (research plot) were noted as a result of natural forces or human activities. PMID:25061414

Spatial and Temporal Dynamics of Flora in Forest, Grassland and Common Land Ecosystems of Western Chitwan, Nepal.

PubMed

Dangol, Dharma Raj; Maharjan, Keshav Lall

2012-06-30

This paper describes changes of species composition and population of flora in space and time in western Chitwan, Nepal. This paper also discusses on the changes in flora due to flood and human activities. To illustrate these changes, we used survey data collected from January to April of 1996, 2000, and 2007 from the Barandabhar forest, National Park forest and the forests along the Narayani River banks, grasslands of National Park and common lands of western Chitwan as a part of longitudinal study on "reciprocal relation of population and the environment". From these data, density values were calculated to analyze spatial and temporal changes in flora species composition and population. We also noted the changes of top species in time and space in due course of time. If the species and its rank not changed, their densities (population) values of flora species changed. We found that changes in species composition, population, appearance or disappearance of flora from a particular space (research plot) were noted as a result of natural forces or human activities.

Species composition and structure of regenerated and remnant forest patches within an urban landscape

Treesearch

Wayne C. Zipperer

2002-01-01

Regenerated and remnant forest patches were inventoried in Syracuse, New York, USA to determine differences in structure, species composition, human disturbances, and landscape context. Patches had similar mean stem diameter, total stem density, and total basal areas, but differed with respect to diameter distribution, disturbance regime, landscape context, and...

LANDIS PRO: a landscape model that predicts forest composition and structure changes at regional scales

Treesearch

Wen J. Wang; Hong S. He; Jacob S. Fraser; Frank R. Thompson; Stephen R. Shifley; Martin A. Spetich

2014-01-01

LANDIS PRO predicts forest composition and structure changes incorporating species-, stand-, and landscape-scales processes at regional scales. Species-scale processes include tree growth, establishment, and mortality. Stand-scale processes contain density- and size-related resource competition that regulates self-thinning and seedling establishment. Landscapescale...

Plant morphological characteristics as a tool in monitoring response to silvicultural activities

Treesearch

David S. Buckley; John C. Zasada; John C., II Tappeiner; Douglas M. Stone

1997-01-01

Monitoring environmental change through documentation of species composition becomes problematic when compositional changes take several years to occur or simply do not occur following silvicultural treatment. Morphological characteristics (e.g., leaf area, node density, bud number) change in many plant species in response to factors such as light availability, soil...

Savanna tree density, herbivores, and the herbaceous community: bottom-up vs. top-down effects.

PubMed

Riginos, Corinna; Grace, James B

2008-08-01

Herbivores choose their habitats both to maximize forage intake and to minimize their risk of predation. For African savanna herbivores, the available habitats range in woody cover from open areas with few trees to dense, almost-closed woodlands. This variation in woody cover or density can have a number of consequences for herbaceous species composition, cover, and productivity, as well as for ease of predator detection and avoidance. Here, we consider two alternative possibilities: first, that tree density affects the herbaceous vegetation, with concomitant "bottom-up" effects on herbivore habitat preferences; or, second, that tree density affects predator visibility, mediating "top-down" effects of predators on herbivore habitat preferences. We sampled sites spanning a 10-fold range of tree densities in an Acacia drepanolobium-dominated savanna in Laikipia, Kenya, for variation in (1) herbaceous cover, composition, and species richness; (2) wild and domestic herbivore use; and (3) degree of visibility obstruction by the tree layer. We then used structural equation modeling to consider the potential influences that tree density may have on herbivores and herbaceous community properties. Tree density was associated with substantial variation in herbaceous species composition and richness. Cattle exhibited a fairly uniform use of the landscape, whereas wild herbivores, with the exception of elephants, exhibited a strong preference for areas of low tree density. Model results suggest that this was not a response to variation in herbaceous-community characteristics, but rather a response to the greater visibility associated with more open places. Elephants, in contrast, preferred areas with higher densities of trees, apparently because of greater forage availability. These results suggest that, for all but the largest species, top-down behavioral effects of predator avoidance on herbivores are mediated by tree density. This, in turn, appears to have cascading effects on the herbaceous vegetation. These results shed light on one of the major features of the "landscape of fear" in which African savanna herbivores exist.

Plant species composition alters the sign and strength of an emergent multi-predator effect by modifying predator foraging behaviour.

PubMed

Wilby, Andrew; Anglin, Linda Anderson; Nesbit, Christopher M

2013-01-01

The prediction of pest-control functioning by multi-predator communities is hindered by the non-additive nature of species functioning. Such non-additivity, commonly termed an emergent multi-predator effect, is known to be affected by elements of the ecological context, such as the structure and composition of vegetation, in addition to the traits of the predators themselves. Here we report mesocosm experiments designed to test the influence of plant density and species composition (wheat monoculture or wheat and faba bean polyculture) on the emergence of multi-predator effects between Adalia bipunctata and Chrysoperla carnea, in their suppression of populations of the aphid Metopolophium dirhodum. The mesocosm experiments were followed by a series of behavioural observations designed to identify how interactions among predators are modified by plant species composition and whether these effects are consistent with the observed influence of plant species composition on aphid population suppression. Although plant density was shown to have no influence on the multi-predator effect on aphid population growth, plant composition had a marked effect. In wheat monoculture, Adalia and Chrysoperla mixed treatments caused greater suppression of M. dirhodum populations than expected. However this positive emergent effect was reversed to a negative multi-predator effect in wheat and faba bean polyculture. The behavioural observations revealed that although dominant individuals did not respond to the presence of faba bean plants, the behaviour of sub-dominants was affected markedly, consistent with their foraging for extra-floral nectar produced by the faba bean. This interaction between plant composition and predator community composition on the foraging behaviour of sub-dominants is thought to underlie the observed effect of plant composition on the multi-predator effect. Thus, the emergence of multi-predator effects is shown to be strongly influenced by plant species composition, mediated, in this case, by the provision of extra-floral nectar by one of the plant species.

Comparative Analysis of Leaf Trichome Structure and Composition of Epicuticular Flavonoids in Finnish Birch Species

PubMed Central

VALKAMA, ELENA; SALMINEN, JUHA‐PEKKA; KORICHEVA, JULIA; PIHLAJA, KALEVI

2003-01-01

The morphology, ultrastructure, density and distribution of trichomes on leaves of Betula pendula, B. pubescens ssp. pubescens, B. pubescens ssp. czerepanovii and B. nana were examined by means of light, scanning and transmission electron microscopy. The composition of flavonoids in ethanolic leaf surface extracts was analysed by high pressure liquid chromatography. All taxa examined contained both glandular and non‐glandular trichomes (short and/or long hairs) but differed from each other in trichome ultrastructure, density and location on the leaf. Leaves of B. pubescens were more hairy than those of B. pendula, but the latter species had a higher density of glandular trichomes. Of the two subspecies of B. pubescens, leaves of ssp. pubescens had more short hairs on the leaf surface and four times the density of glandular trichomes of leaves of ssp. czerepanovii, whereas, in the latter subspecies, short hairs occurred largely on leaf veins, as in B. nana. The glandular trichomes were peltate glands, consisting of medullar and cortical cells, which differed structurally. Cortical cells possessed numerous small, poorly developed plastids and small vacuoles, whereas medullar cells had several large plastids with well‐developed thylakoid systems and fewer vacuoles. In B. pubescens subspecies, vacuoles of the glandular cells contained osmiophilic deposits, which were probably phenolic, whereas in B. pendula, vacuoles of glandular trichomes were characterized by the presence of numerous myelin‐like membranes. The composition of epicuticular flavonoids also differed among species. The two subspecies of B. pubescens and B. nana shared the same 12 compounds, but five of these occurred only in trace amounts in B. nana. Leaf surface extracts of B. pendula contained just six flavonoids, three of which occurred only in this species. In summary, the structure, density and distribution of leaf trichomes and the composition of epicuticular flavonoids represent good taxonomic markers for Finnish birch species. PMID:12714363

Structure and dynamics of mixed-species flocks in a Hawaiian rain forest

USGS Publications Warehouse

Hart, P.J.; Freed, L.A.

2003-01-01

Mixed-species flocks of native and introduced birds were studied for four years in an upper elevation Hawaiian rain forest. Those flocks were characterized by strong seasonality, large size, low species richness, high intraspecific abundance, a lack of migrants, and a general lack of territoriality or any sort of dominance hierarchy. There was high variability among years in patterns of occurrence at the species level, and high variability within years at the individual level. These flocks are loosely structured social groupings with apparently open membership. The fluid, unstable movement patterns, high degree of variability in size and composition, and lack of positive interspecific associations are not consistent with the “foraging enhancement” hypothesis for flocking. Two resident, endangered insectivores, the Akepa (Loxops coccineus) and Hawaii Creeper (Oreomystis mana) served as “nuclear” species. Flock composition was compared between two study sites that differed significantly in density of these two nuclear species. Flock size was similar at the two sites, primarily because the nuclear species were over-represented relative to their density. This observation suggests that birds are attempting to achieve a more optimal flock size at the lower density site.

Evaluating analytical approaches for estimating pelagic fish biomass using simulated fish communities

USGS Publications Warehouse

Yule, Daniel L.; Adams, Jean V.; Warner, David M.; Hrabik, Thomas R.; Kocovsky, Patrick M.; Weidel, Brian C.; Rudstam, Lars G.; Sullivan, Patrick J.

2013-01-01

Pelagic fish assessments often combine large amounts of acoustic-based fish density data and limited midwater trawl information to estimate species-specific biomass density. We compared the accuracy of five apportionment methods for estimating pelagic fish biomass density using simulated communities with known fish numbers that mimic Lakes Superior, Michigan, and Ontario, representing a range of fish community complexities. Across all apportionment methods, the error in the estimated biomass generally declined with increasing effort, but methods that accounted for community composition changes with water column depth performed best. Correlations between trawl catch and the true species composition were highest when more fish were caught, highlighting the benefits of targeted trawling in locations of high fish density. Pelagic fish surveys should incorporate geographic and water column depth stratification in the survey design, use apportionment methods that account for species-specific depth differences, target midwater trawling effort in areas of high fish density, and include at least 15 midwater trawls. With relatively basic biological information, simulations of fish communities and sampling programs can optimize effort allocation and reduce error in biomass estimates.

Inter-habitat variation in density and size composition of reef fishes from the Cuban Northwestern shelf.

PubMed

Aguilar, Consuelo; González-Sansón, Gaspar; Cabrera, Yureidy; Ruiz, Alexei; Curry, R Allen

2014-06-01

Movement and exchange of individuals among habitats is critical for the dynamics and success of reef fish populations. Size segregation among habitats could be taken as evidence for habitat connectivity, and this would be a first step to formulate hypotheses about ontogenetic inter-habitat migrations. The primary goal of our research was to find evidence of inter-habitat differences in size distributions and density of reef fish species that can be classified a priori as habitat-shifters in an extensive (-600km2) Caribbean shelf area in NW Cuba. We sampled the fish assemblage of selected species using visual census (stationary and transect methods) in 20 stations (sites) located in mangrove roots, patch reefs, inner zone of the crest and fore reef (12-16m depth). In each site, we performed ten censuses for every habitat type in June and September 2009. A total of 11 507 individuals of 34 species were counted in a total of 400 censuses. We found significant differences in densities and size compositions among reef and mangrove habitats, supporting the species-specific use of coastal habitats. Adults were found in all habitats. Reef habitats, mainly patch reefs, seem to be most important for juvenile fish of most species. Mangroves were especially important for two species of snappers (Lutjanus apodus and L. griseus), providing habitat for juveniles. These species also displayed well defined gradients in length composition across the shelf.

Managed forest landscape structure and avian species richness in the southeastern US

Treesearch

Craig Loehle; T. Bently Wigley; Scott Rutzmoser; John A. Gerwin; Patrick D. Keyser; Richard A. Lancia; Christopher J. Reynolds; Ronald E. Thill; Robert Weih; Don White; Petra Bohall Wood

2005-01-01

Forest structural features at the stand scale (e.g., snags, stem density, species composition) and habitat attributes at larger spatial scales (e.g., landscape pattern, road density) can influence biological diversity and have been proposed as indicators in sustainable forestry programs. This study investigated relationships between such factors and total richness of...

Variation of arbuscular mycorrhizal fungal communities along an altitudinal gradient in rupestrian grasslands in Brazil.

PubMed

Coutinho, Etiene Silva; Fernandes, G Wilson; Berbara, Ricardo Luís Louro; Valério, Henrique Maia; Goto, Bruno Tomio

2015-11-01

Variation in arbuscular mycorrhizal fungi (AMF) communities is described for the first time in rupestrian grasslands in Brazil along an altitudinal gradient of 700 m (800 to 1400 m a.s.l.). Hypotheses tested were that soil properties influence the variation in AMF communities and that the frequency of the most common species of AMF is inversely influenced by the richness of other AMF. Field and laboratory data were collected on AMF community composition, richness, density, and frequency in the altitudinal gradient, and the relationships with several physical-chemical soil properties and altitude were evaluated. Fifty-one species of AMF were recorded, with 14 species being reported as possibly new to science and nine species representing new records for Brazil. This single elevation gradient alone contains 22% of the known world diversity of AMF. Soil properties and AMF community density and richness varied significantly along the elevation (p < 0.05). AMF density and richness were higher at the intermediate altitude, while AMF species composition differed statistically among the altitudes.

Drosophila Regulate Yeast Density and Increase Yeast Community Similarity in a Natural Substrate

PubMed Central

Stamps, Judy A.; Yang, Louie H.; Morales, Vanessa M.; Boundy-Mills, Kyria L.

2012-01-01

Drosophila melanogaster adults and larvae, but especially larvae, had profound effects on the densities and community structure of yeasts that developed in banana fruits. Pieces of fruit exposed to adult female flies previously fed fly-conditioned bananas developed higher yeast densities than pieces of the same fruits that were not exposed to flies, supporting previous suggestions that adult Drosophila vector yeasts to new substrates. However, larvae alone had dramatic effects on yeast density and species composition. When yeast densities were compared in pieces of the same fruits assigned to different treatments, fruits that developed low yeast densities in the absence of flies developed significantly higher yeast densities when exposed to larvae. Across all of the fruits, larvae regulated yeast densities within narrow limits, as compared to a much wider range of yeast densities that developed in pieces of the same fruits not exposed to flies. Larvae also affected yeast species composition, dramatically reducing species diversity across fruits, reducing variation in yeast communities from one fruit to the next (beta diversity), and encouraging the consistent development of a yeast community composed of three species of yeast (Candida californica, C. zemplinina, and Pichia kluvyeri), all of which were palatable to larvae. Larvae excreted viable cells of these three yeast species in their fecal pools, and discouraged the growth of filamentous fungi, processes which may have contributed to their effects on the yeast communities in banana fruits. These and other findings suggest that D. melanogaster adults and their larval offspring together engage in ‘niche construction’, facilitating a predictable microbial environment in the fruit substrates in which the larvae live and develop. PMID:22860093

Centrarchid assemblages in Mississippi state-operated fishing lakes

USGS Publications Warehouse

Olive, J.A.; Miranda, L.E.; Hubbard, W.D.

2005-01-01

We evaluated electrofishing catch per effort in 27 state-operated fishing lakes in Mississippi to identify patterns of centrarchid community composition and to determine whether those patterns were related to selected environmental characteristics and to artificial nutrient enrichment. Ordination with detrended correspondence analysis recognized two major axes accounting for 77% of the variability in species ordination. Axis 1 showed a distinct separation between the body sizes of various species. A notable exception was the density of small (<30 cm) largemouth bass Micropterus salmoides, which aligned with the large individuals of other centrarchid species. This pattern suggested that through predation, high densities of small largemouth bass exerted significant control over the size structure of fish communities. Axis 2 separated species of crappies Pomoxis spp., suggesting that conditions other than strong species interactions also moderated the composition of crappies in the assemblages. However, neither lake morphometry nor watershed composition exhibited a major influence over axes 1 or 2. In small, intensively managed lakes with low habitat complexity, the regulatory importance of biotic interactions may overwhelm that of abiotic factors. Nutrient enrichment influenced community structure by changing the densities of bluegill Lepomis macrochirus and largemouth bass substantially but had a minor or no effect on other species. The management techniques used in these state-operated lakes are usually targeted toward a particular species without adequately considering the other species within the community. Our results show that attention to community-level interactions could provide valuable insight into factors that affect the quality of the fishery, insight that is not available through traditional population-level assessments. ?? Copyright by the American Fisheries Society 2005.

Effects of the seasonal flooding on riparian soil seed bank in the Three Gorges Reservoir Region: a case study in Shanmu River.

PubMed

Zhang, Miao; Chen, Fangqing; Chen, Shaohua; Wang, Yajin; Wang, Jianzhu

2016-01-01

The water-level fluctuation in the Three Gorges Reservoir Region has changed dramatically as a result of the hydroelectric project for flood control and power generation. The riparian seasonal hydrological environment also has changed from summer flooding with winter drought to summer drought with winter flooding. The changes of riparian seed bank and vegetation were investigated to determine the effects of the seasonal flooding on the composition and spatial distribution of riparian soil seed bank and the similarity of seed bank to standing vegetation. We conducted intensive riparian soil sampling (525 samples) along altitude gradient in the Shanmu River, a tributary of the Yangzi River in the reservoir region of China. Seed bank density, species richness and composition of soil seed bank were examined using the seedling-emergence method. The seasonal hydrological conditions resulted in a decrease in species diversity and an increase in the distribution heterogeneity of the soil seed bank. The soil seed bank was composed of 48 species from 22 families and 40 genera. Most species were annual and perennial herbaceous Polygonaceae, Asteraceae, and Poaceae. Rumex dentatus was the predominant species accounting for 27.0 % of the total seeds. Diversity and composition of the seed bank changed along an altitude gradient and soil depth. Maximum species richness was found in the top soil layer at 165 m and 175 m above sea level. The mean overall seed density of the soil seed bank was 13,475.3 ind m(-2). Density and the number of seeds increased initially and then decreased with increased altitude. Maximum seed density (22,500.2 ind m(-2)) was found at 165 m above sea level in the intermediately flooded riverbank, with the seed number accounting for 27.8 % of the total soil seed bank. Average seed density declined significantly with soil depth. The similarity of seed bank to standing vegetation was relatively high. The environmental heterogeneity created by the wide range and seasonal flooding led to the changes in biodiversity and seed density along altitude gradient. The seasonal flooding also led to the increase in the similarity of seed bank to standing vegetation as their composition both degraded. The seasonal flooding due to the dam reshape the composition and spatial distribution of riparian soil seed bank and limit the vegetation to a grassland dominated by a few annuals and perennials in the Three Gorges Reservoir Region.

Vegetation in Bangalore's Slums: Composition, Species Distribution, Density, Diversity, and History

NASA Astrophysics Data System (ADS)

Gopal, Divya; Nagendra, Harini; Manthey, Michael

2015-06-01

There is widespread acknowledgement of the need for biodiversity and greening to be part of urban sustainability efforts. Yet we know little about greenery in the context of urban poverty, particularly in slums, which constitute a significant challenge for inclusive development in many rapidly growing cities. We assessed the composition, density, diversity, and species distribution of vegetation in 44 slums of Bangalore, India, comparing these to published studies on vegetation diversity in other land-use categories. Most trees were native to the region, as compared to other land-use categories such as parks and streets which are dominated by introduced species. Of the most frequently encountered tree species, Moringa oleifera and Cocos nucifera are important for food, while Ficus religiosa plays a critical cultural and religious role. Tree density and diversity were much lower in slums compared to richer residential neighborhoods. There are also differences in species preferences, with most plant (herb, shrub and vines) species in slums having economic, food, medicinal, or cultural use, while the species planted in richer residential areas are largely ornamental. Historic development has had an impact on species distribution, with older slums having larger sized tree species, while recent slums were dominated by smaller sized tree species with greater economic and food use. Extensive focus on planting trees and plant species with utility value is required in these congested neighborhoods, to provide livelihood support.

Species effects on ecosystem processes are modified by faunal responses to habitat composition.

PubMed

Bulling, Mark T; Solan, Martin; Dyson, Kirstie E; Hernandez-Milian, Gema; Luque, Patricia; Pierce, Graham J; Raffaelli, Dave; Paterson, David M; White, Piran C L

2008-12-01

Heterogeneity is a well-recognized feature of natural environments, and the spatial distribution and movement of individual species is primarily driven by resource requirements. In laboratory experiments designed to explore how different species drive ecosystem processes, such as nutrient release, habitat heterogeneity is often seen as something which must be rigorously controlled for. Most small experimental systems are therefore spatially homogeneous, and the link between environmental heterogeneity and its effects on the redistribution of individuals and species, and on ecosystem processes, has not been fully explored. In this paper, we used a mesocosm system to investigate the relationship between habitat composition, species movement and sediment nutrient release for each of four functionally contrasting species of marine benthic invertebrate macrofauna. For each species, various habitat configurations were generated by selectively enriching patches of sediment with macroalgae, a natural source of spatial variability in intertidal mudflats. We found that the direction and extent of faunal movement between patches differs with species identity, density and habitat composition. Combinations of these factors lead to concomitant changes in nutrient release, such that habitat composition effects are modified by species identity (in the case of NH4-N) and by species density (in the case of PO4-P). It is clear that failure to accommodate natural patterns of spatial heterogeneity in such studies may result in an incomplete understanding of system behaviour. This will be particularly important for future experiments designed to explore the effects of species richness on ecosystem processes, where the complex interactions reported here for single species may be compounded when species are brought together in multi-species combinations.

Effects of long-term trampling on the above-ground forest vegetation and soil seed bank at the base of limestone cliffs.

PubMed

Rusterholz, Hans-Peter; Verhoustraeten, Christine; Baur, Bruno

2011-11-01

Exposed limestone cliffs in central Europe harbor a highly divers flora with many rare and endangered species. During the past few decades, there has been increasing recreational use of these cliffs, which has caused local environmental disturbances. Successful restoration strategies hinge on identifying critical limitations. We examined the composition of aboveground forest vegetation and density and species composition of seeds in the soil seed bank at the base of four limestone cliffs in mixed deciduous forests that are intensively disturbed by human trampling and at four undisturbed cliffs in the Jura Mountains in northwestern Switzerland. We found that long-term human trampling reduced total aboveground vegetation cover at the base of cliffs and caused a significant shift in the plant-species composition. Compared with undisturbed cliffs, total seed density was lower in disturbed cliffs. Human trampling also altered the species composition of seeds in the soil seed bank. Seeds of unintentionally introduced, stress-tolerant, and ruderal species dominated the soil seed bank at the base of disturbed cliffs. Our findings indicate that a restoration of degraded cliff bases from the existing soil seed bank would result in a substantial change of the original unique plant composition. Active seed transfer, or seed flux from adjacent undisturbed forest areas, is essential for restoration success.

How many fish? Comparison of two underwater visual sampling methods for monitoring fish communities

PubMed Central

Sini, Maria; Vatikiotis, Konstantinos; Katsoupis, Christos

2018-01-01

Background Underwater visual surveys (UVSs) for monitoring fish communities are preferred over fishing surveys in certain habitats, such as rocky or coral reefs and seagrass beds and are the standard monitoring tool in many cases, especially in protected areas. However, despite their wide application there are potential biases, mainly due to imperfect detectability and the behavioral responses of fish to the observers. Methods The performance of two methods of UVSs were compared to test whether they give similar results in terms of fish population density, occupancy, species richness, and community composition. Distance sampling (line transects) and plot sampling (strip transects) were conducted at 31 rocky reef sites in the Aegean Sea (Greece) using SCUBA diving. Results Line transects generated significantly higher values of occupancy, species richness, and total fish density compared to strip transects. For most species, density estimates differed significantly between the two sampling methods. For secretive species and species avoiding the observers, the line transect method yielded higher estimates, as it accounted for imperfect detectability and utilized a larger survey area compared to the strip transect method. On the other hand, large-scale spatial patterns of species composition were similar for both methods. Discussion Overall, both methods presented a number of advantages and limitations, which should be considered in survey design. Line transects appear to be more suitable for surveying secretive species, while strip transects should be preferred at high fish densities and for species of high mobility. PMID:29942703

Disturbance and productivity interactions mediate stability of forest composition and structure.

PubMed

O'Connor, Christopher D; Falk, Donald A; Lynch, Ann M; Swetnam, Thomas W; Wilcox, Craig P

2017-04-01

Fire is returning to many conifer-dominated forests where species composition and structure have been altered by fire exclusion. Ecological effects of these fires are influenced strongly by the degree of forest change during the fire-free period. Response of fire-adapted species assemblages to extended fire-free intervals is highly variable, even in communities with similar historical fire regimes. This variability in plant community response to fire exclusion is not well understood; however, ecological mechanisms such as individual species' adaptations to disturbance or competition and underlying site characteristics that facilitate or impede establishment and growth have been proposed as potential drivers of assemblage response. We used spatially explicit dendrochronological reconstruction of tree population dynamics and fire regimes to examine the influence of historical disturbance frequency (a proxy for adaptation to disturbance or competition), and potential site productivity (a proxy for underlying site characteristics) on the stability of forest composition and structure along a continuous ecological gradient of pine, dry mixed-conifer, mesic mixed-conifer, and spruce-fir forests following fire exclusion. While average structural density increased in all forests, species composition was relatively stable in the lowest productivity pine-dominated and highest productivity spruce-fir-dominated sites immediately following fire exclusion and for the next 100 years, suggesting site productivity as a primary control on species composition and structure in forests with very different historical fire regimes. Species composition was least stable on intermediate productivity sites dominated by mixed-conifer forests, shifting from primarily fire-adapted species to competition-adapted, fire-sensitive species within 20 years of fire exclusion. Rapid changes to species composition and stand densities have been interpreted by some as evidence of high-severity fire. We demonstrate that the very different ecological process of fire exclusion can produce similar changes by shifting selective pressures from disturbance-mediated to productivity-mediated controls. Restoring disturbance-adapted species composition and structure to intermediate productivity forests may help to buffer them against projected increasing temperatures, lengthening fire seasons, and more frequent and prolonged moisture stress. Fewer management options are available to promote adaptation in forest assemblages historically constrained by underlying site productivity. © 2016 by the Ecological Society of America.

The costs of evaluating species densities and composition of snakes to assess development impacts in amazonia.

PubMed

Fraga, Rafael de; Stow, Adam J; Magnusson, William E; Lima, Albertina P

2014-01-01

Studies leading to decision-making for environmental licensing often fail to provide accurate estimates of diversity. Measures of snake diversity are regularly obtained to assess development impacts in the rainforests of the Amazon Basin, but this taxonomic group may be subject to poor detection probabilities. Recently, the Brazilian government tried to standardize sampling designs by the implementation of a system (RAPELD) to quantify biological diversity using spatially-standardized sampling units. Consistency in sampling design allows the detection probabilities to be compared among taxa, and sampling effort and associated cost to be evaluated. The cost effectiveness of detecting snakes has received no attention in Amazonia. Here we tested the effects of reducing sampling effort on estimates of species densities and assemblage composition. We identified snakes in seven plot systems, each standardised with 14 plots. The 250 m long centre line of each plot followed an altitudinal contour. Surveys were repeated four times in each plot and detection probabilities were estimated for the 41 species encountered. Reducing the number of observations, or the size of the sampling modules, caused significant loss of information on species densities and local patterns of variation in assemblage composition. We estimated the cost to find a snake as $ 120 U.S., but general linear models indicated the possibility of identifying differences in assemblage composition for half the overall survey costs. Decisions to reduce sampling effort depend on the importance of lost information to target-issues, and may not be the preferred option if there is the potential for identifying individual snake species requiring specific conservation actions. However, in most studies of human disturbance on species assemblages, it is likely to be more cost-effective to focus on other groups of organisms with higher detection probabilities.

The Costs of Evaluating Species Densities and Composition of Snakes to Assess Development Impacts in Amazonia

PubMed Central

de Fraga, Rafael; Stow, Adam J.; Magnusson, William E.; Lima, Albertina P.

2014-01-01

Studies leading to decision-making for environmental licensing often fail to provide accurate estimates of diversity. Measures of snake diversity are regularly obtained to assess development impacts in the rainforests of the Amazon Basin, but this taxonomic group may be subject to poor detection probabilities. Recently, the Brazilian government tried to standardize sampling designs by the implementation of a system (RAPELD) to quantify biological diversity using spatially-standardized sampling units. Consistency in sampling design allows the detection probabilities to be compared among taxa, and sampling effort and associated cost to be evaluated. The cost effectiveness of detecting snakes has received no attention in Amazonia. Here we tested the effects of reducing sampling effort on estimates of species densities and assemblage composition. We identified snakes in seven plot systems, each standardised with 14 plots. The 250 m long centre line of each plot followed an altitudinal contour. Surveys were repeated four times in each plot and detection probabilities were estimated for the 41 species encountered. Reducing the number of observations, or the size of the sampling modules, caused significant loss of information on species densities and local patterns of variation in assemblage composition. We estimated the cost to find a snake as $ 120 U.S., but general linear models indicated the possibility of identifying differences in assemblage composition for half the overall survey costs. Decisions to reduce sampling effort depend on the importance of lost information to target-issues, and may not be the preferred option if there is the potential for identifying individual snake species requiring specific conservation actions. However, in most studies of human disturbance on species assemblages, it is likely to be more cost-effective to focus on other groups of organisms with higher detection probabilities. PMID:25147930

Effects of selective logging on bat communities in the southeastern Amazon.

PubMed

Peters, Sandra L; Malcolm, Jay R; Zimmerman, Barbara L

2006-10-01

Although extensive areas of tropical forest are selectively logged each year, the responses of bat communities to this form of disturbance have rarely been examined. Our objectives were to (1) compare bat abundance, species composition, and feeding guild structure between unlogged and low-intensity selectively logged (1-4 logged stems/ha) sampling grids in the southeastern Amazon and (2) examine correlations between logging-induced changes in bat communities and forest structure. We captured bats in understory and canopy mist nets set in five 1-ha study grids in both logged and unlogged forest. We captured 996 individuals, representing 5 families, 32 genera, and 49 species. Abundances of nectarivorous and frugivorous taxa (Glossophaginae, Lonchophyllinae, Stenodermatinae, and Carolliinae) were higher at logged sites, where canopy openness and understory foliage density were greatest. In contrast, insectivorous and omnivorous species (Emballonuridae, Mormoopidae, Phyllostominae, and Vespertilionidae) were more abundant in unlogged sites, where canopy foliage density and variability in the understory stratum were greatest. Multivariate analyses indicated that understory bat species composition differed strongly between logged and unlogged sites but provided little evidence of logging effects for the canopy fauna. Different responses among feeding guilds and taxonomic groups appeared to be related to foraging and echolocation strategies and to changes in canopy cover and understory foliage densities. Our results suggest that even low-intensity logging modifies habitat structure, leading to changes in bat species composition.

Synthesis and Performance Characterization of a Nanocomposite Ternary Thermite: Al/Fe2O3/SiO2

DOE Office of Scientific and Technical Information (OSTI.GOV)

Prentice, D; Pantoya, M L; Clapsaddle, B J

2005-02-04

Making solid energetic materials requires the physical mixing of solid fuels and oxidizers or the incorporation of fuel and oxidizing moieties into a single molecule. The former are referred to as composite energetic materials (i.e., thermites, propellants, pyrotechnics) and the latter are deemed monomolecular energetic materials (i.e., explosives). Mass diffusion between the fuel and oxidizer is the rate controlling step for composite reactions while bond breaking and chemical kinetics control monomolecular reactions. Although composites have higher energy densities than monomolecular species, they release that energy over a longer period of time because diffusion controlled reactions are considerably slower than chemistrymore » controlled reactions. Conversely, monomolecular species exhibit greater power due to more rapid kinetics than physically mixed energetics. Reducing the diffusion distance between fuel and oxidizer species within an energetic composite would enhance the reaction rate. Recent advances in nanotechnology have spurred the development of nano-scale fuel and oxidizer particles that can be combined into a composite and effectively reduce diffusion distances to nano-scale dimensions or less. These nanocomposites have the potential to deliver the best of both worlds: high energy density of the physically mixed composite with the high power of the monomolecular species. Toward this end, researchers at Lawrence Livermore National Laboratory (LLNL) developed nano-particle synthesis techniques, based on sol-gel chemistry, for the production of thermite nanocomposites.« less

Composition of soil seed banks in southern California coastal sage scrub and adjacent exotic grassland

Treesearch

Robert D. Cox; Edith B. Allen

2008-01-01

Soil seed banks are important to many plant communities and are recognized as an important component of management plans. Understanding seed bank composition and density is especially important when communities have been invaded by exotic species and must be managed to promote desirable species. We examined germinable soil seed banks in southern California coastal sage...

Forest stand structure and pattern of old-growth western hemlock/Douglas-fir and mixed-conifer forests

Treesearch

Malcolm North; Jiquan Chen; Brian Oakley; Bo Song; Mark Rudnicki; Andrew Gray; Jim Innes

2004-01-01

With fire suppression, many western forests are expected to have fewer gaps and higher stem density of shade-tolerant species as light competition becomes a more significant influence on stand pattern and composition. We compared species composition, structure, spatial pattern, and environmental factors such as light and soil moisture between two old-growth forests:...

Variability in Phytoplankton Morphology and Macromolecular Composition With Nutrient Starvation and The Implications for Oceanic Elemental Stoichiometry

NASA Astrophysics Data System (ADS)

Liefer, J. D.; Benner, I.; Brown, C. M.; Garg, A.; Fiset, C.; Irwin, A. J.; Follows, M. J.; Finkel, Z.

2016-02-01

Trait based modeling efforts are an important tool for predicting the distribution of phytoplankton communities in the ocean and their interaction with elemental stoichiometry. The elemental stoichiometry of phytoplankton is based on their macromolecular composition. Many phytoplankton species accumulate C-rich storage products (carbohydrates and lipids) and reduce N and P-rich functional components (proteins and nucleic acids) upon N- or P-starvation. Reconciling global patterns in C:N:P stoichiometry and phytoplankton community structure and succession requires a better understanding of how phytoplankton macromolecular composition varies across taxa, size class, and growth conditions. We examined changes in cell size and composition from exponential growth to nitrogen starvation in four common phytoplankton species representing two size classes each of chlorophytes and diatoms. Variation in cell size, cell mass, and length of stationary growth phase appeared to be size dependent. The larger species of chlorophyte and diatom had a significant increase in cell mass and cell size with N-starvation and showed no significant change in cell density after starvation for 5-7 days. The smaller size species of both phyla showed no significant change in cell size or mass upon N-starvation and a consistent decline in cell density 1-2 days after peak densities were reached. All species had a similar significant increase in C quota, but changes in N quota and C:N were more variable and species-specific. We also present changes in macromolecular composition and C, N, and P-allocation due to N-starvation and their implications for elemental stoichiometry under natural conditions. These results are compared to field observations of C:N:P stoichiometry and phytoplankton community structure to examine the physiological plasticity that may underlie global oceanic C:N:P variability and demonstrate the importance of this plasticity in trait based models.

[Effects of highway on the vegetation species composition along a distance gradient from road edge in southeastern margin of Tengeer Desert].

PubMed

Feng, Li; Li, Xin-Rong; Guo, Qun; Zhang, Jing-Guang; Zhang, Zhi-Shan

2011-05-01

Aimed to examine the effects of highway on the vegetation species composition in arid desert area, forty-eight transects perpendicular to the provincial highway 201 from Shapotou to Jing-tai in the southeastern margin of Tengger Desert were installed, with the vegetation species distribution along a distance gradient from the road edge investigated. The results showed that with increasing distance from the road edge, the species number, coverage, biomass, and alpha-diversity of herbaceous plants declined, but had no significant differences with the control beyond 5 m. Within 0-6 m to the road edge, the herbaceous plant height was greater than that of the control, but their density had less change. Within 0-2 m to the road edge, the species turnover rate of herbaceous plants was lower; at 2-5m, this rate was the highest; while beyond 10 m, the species composition of herbaceous plants was similar to that of the control. The herbaceous plant community at the road edge was dominated by gramineous plants, with the disturbance-tolerant species Pennisetum centrasiaticum, Chloris virgata, and Agropyron cristatum accounting for 68.6% of the total. C. virgata beyond 1 m to the road edge had a rapid decrease in its individual number and presence frequency, P. centrasiaticum and A. cristatum beyond 2 m also showed a similar trend, while the composite plants Artemisia capillaris and A. frigida beyond 2 m from the road edge had a rapid increase in its individual number, accounting for 70% of the herbaceous plants. At the road edge, the coverage and density of shrubs were significantly lower than those of the control, but the species composition had no significant difference.

Effect of Landscape Pattern on Insect Species Density within Urban Green Spaces in Beijing, China

PubMed Central

Su, Zhimin; Li, Xiaoma; Zhou, Weiqi; Ouyang, Zhiyun

2015-01-01

Urban green space is an important refuge of biodiversity in urban areas. Therefore, it is crucial to understand the relationship between the landscape pattern of green spaces and biodiversity to mitigate the negative effects of urbanization. In this study, we collected insects from 45 green patches in Beijing during July 2012 using suction sampling. The green patches were dominated by managed lawns, mixed with scattered trees and shrubs. We examined the effects of landscape pattern on insect species density using hierarchical partitioning analysis and partial least squares regression. The results of the hierarchical partitioning analysis indicated that five explanatory variables, i.e., patch area (with 19.9% independent effects), connectivity (13.9%), distance to nearest patch (13.8%), diversity for patch types (11.0%), and patch shape (8.3%), significantly contributed to insect species density. With the partial least squares regression model, we found species density was negatively related to patch area, shape, connectivity, diversity for patch types and proportion of impervious surface at the significance level of p < 0.05 and positively related to proportion of vegetated land. Regression tree analysis further showed that the highest species density was found in green patches with an area <500 m2. Our results indicated that improvement in habitat quality, such as patch area and connectivity that are typically thought to be important for conservation, did not actually increase species density. However, increasing compactness (low-edge) of patch shape and landscape composition did have the expected effect. Therefore, it is recommended that the composition of the surrounding landscape should be considered simultaneously with planned improvements in local habitat quality. PMID:25793897

Effect of landscape pattern on insect species density within urban green spaces in Beijing, China.

PubMed

Su, Zhimin; Li, Xiaoma; Zhou, Weiqi; Ouyang, Zhiyun

2015-01-01

Urban green space is an important refuge of biodiversity in urban areas. Therefore, it is crucial to understand the relationship between the landscape pattern of green spaces and biodiversity to mitigate the negative effects of urbanization. In this study, we collected insects from 45 green patches in Beijing during July 2012 using suction sampling. The green patches were dominated by managed lawns, mixed with scattered trees and shrubs. We examined the effects of landscape pattern on insect species density using hierarchical partitioning analysis and partial least squares regression. The results of the hierarchical partitioning analysis indicated that five explanatory variables, i.e., patch area (with 19.9% independent effects), connectivity (13.9%), distance to nearest patch (13.8%), diversity for patch types (11.0%), and patch shape (8.3%), significantly contributed to insect species density. With the partial least squares regression model, we found species density was negatively related to patch area, shape, connectivity, diversity for patch types and proportion of impervious surface at the significance level of p < 0.05 and positively related to proportion of vegetated land. Regression tree analysis further showed that the highest species density was found in green patches with an area <500 m2. Our results indicated that improvement in habitat quality, such as patch area and connectivity that are typically thought to be important for conservation, did not actually increase species density. However, increasing compactness (low-edge) of patch shape and landscape composition did have the expected effect. Therefore, it is recommended that the composition of the surrounding landscape should be considered simultaneously with planned improvements in local habitat quality.

Composition and structure of an old-growth floodplain forest of the lower Kaskaskia River

Treesearch

John B. Taft

2003-01-01

Compositional and structural properties of canopy, shrub/sapling, and ground-cover strata were measured within an old-growth floodplain forest bordering the lower Kaskaskia River in southwestern Illinois. Basal area for trees was estimated at 31.8 m²/ha, tree density was 398 trees/ha with 27 species recorded in the canopy stratum. The dominant tree species...

Detectability of landscape effects on recolonization increases with regional population density

PubMed Central

Liman, Anna-Sara; Dalin, Peter; Björkman, Christer

2015-01-01

Variation in population size over time can influence our ability to identify landscape-moderated differences in community assembly. To date, however, most studies at the landscape scale only cover snapshots in time, thereby overlooking the temporal dynamics of populations and communities. In this paper, we present data that illustrate how temporal variation in population density at a regional scale can influence landscape-moderated variation in recolonization and population buildup in disturbed habitat patches. Four common insect species, two omnivores and two herbivores, were monitored over 8 years in 10 willow short-rotation coppice bio-energy stands with a four-year disturbance regime (coppice cycle). The population densities in these regularly disturbed stands were compared to densities in 17 undisturbed natural Salix cinerea (grey willow) stands in the same region. A time series approach was used, utilizing the natural variation between years to statistically model recolonization as a function of landscape composition under two different levels of regional density. Landscape composition, i.e. relative amount of forest vs. open agricultural habitats, largely determined the density of re-colonizing populations following willow coppicing in three of the four species. However, the impact of landscape composition was not detectable in years with low regional density. Our results illustrate that landscape-moderated recolonization can change over time and that considering the temporal dynamics of populations may be crucial when designing and evaluating studies at landscape level. PMID:26257881

Detectability of landscape effects on recolonization increases with regional population density.

PubMed

Liman, Anna-Sara; Dalin, Peter; Björkman, Christer

2015-07-01

Variation in population size over time can influence our ability to identify landscape-moderated differences in community assembly. To date, however, most studies at the landscape scale only cover snapshots in time, thereby overlooking the temporal dynamics of populations and communities. In this paper, we present data that illustrate how temporal variation in population density at a regional scale can influence landscape-moderated variation in recolonization and population buildup in disturbed habitat patches. Four common insect species, two omnivores and two herbivores, were monitored over 8 years in 10 willow short-rotation coppice bio-energy stands with a four-year disturbance regime (coppice cycle). The population densities in these regularly disturbed stands were compared to densities in 17 undisturbed natural Salix cinerea (grey willow) stands in the same region. A time series approach was used, utilizing the natural variation between years to statistically model recolonization as a function of landscape composition under two different levels of regional density. Landscape composition, i.e. relative amount of forest vs. open agricultural habitats, largely determined the density of re-colonizing populations following willow coppicing in three of the four species. However, the impact of landscape composition was not detectable in years with low regional density. Our results illustrate that landscape-moderated recolonization can change over time and that considering the temporal dynamics of populations may be crucial when designing and evaluating studies at landscape level.

Influence of forest fragmentation on community structure of frogs and lizards in northeastern Costa Rica.

PubMed

Bell, Kristen E; Donnelly, Maureen A

2006-12-01

To better understand responses of reptiles and amphibians to forest fragmentation in the lowland Neotropics, we examined community and population structure of frogs and lizards in the fragmented landscape surrounding La Selva Biological Station in the Sarapiquí region of northeastern Costa Rica. We used diurnal quadrats and nocturnal transects to sample frogs and lizards in nine forest fragments (1-7 ha each) and La Selva (1100 ha). Species richness in all fragments combined was 85% of that found in La Selva with comparable sampling effort. Richness varied from 10 to 24 species among forest fragments, compared with 36 species at La Selva. Lizard density was higher and frog density was lower in forest fragments than in La Selva. Community composition varied among sites and by fragment size class, and species occurrence was nested with respect to fragment area. Isolation and habitat variables did not significantly affect species richness, composition, or nestedness. We classified 34% of species as fragmentation sensitive because they were absent or occurred at low densities in fragments. Nevertheless, the relatively high diversity observed in the entire set of fragments indicates that preserving a network of small forest patches may be of considerable conservation value to the amphibians and reptiles of this region.

Young Stand Thinning and Diversity Study: Response of Songbird Community One Decade Post-Treatment

USGS Publications Warehouse

Hagar, Joan; Friesen, Cheryl

2009-01-01

The response of songbird assemblages to commercial thinning is likely to change as vegetation develops over time after thinning. The influence of thinning intensity and pattern on the timing of transitions in bird community composition following thinning is of interest to managers when a goal is to maintain diversity and accelerate the development of late-seral forest structure. We investigated changes in the composition of songbird assemblages and density of individual species from 2 years before to 12 years after experimental thinning of 40-year-old stands dominated by Douglas-fir (Pseudotsuga menziesii) in the Oregon Cascades. Species richness, and density for five species and the neotropical migrant group were greater in thinned than in unthinned control stands over all post-treatment years of the study. Similarly, three species maintained a negative response to thinning over the post-treatment period. The initial positive influence of thinning was no longer in evidence a decade after harvest for five species. Of seven species with an initial negative response to thinning, three indicated recovery towards pre-treatment densities by the end of the most recent post-treatment survey. Our study is one of the first to document long-term effects of commercial thinning on forest songbird assemblages in the Pacific Northwest.

Species richness and trait composition of butterfly assemblages change along an altitudinal gradient.

PubMed

Leingärtner, Annette; Krauss, Jochen; Steffan-Dewenter, Ingolf

2014-06-01

Species richness patterns along altitudinal gradients are well-documented ecological phenomena, yet very little data are available on how environmental filtering processes influence the composition and traits of butterfly assemblages at high altitudes. We have studied the diversity patterns of butterfly species at 34 sites along an altitudinal gradient ranging from 600 to 2,000 m a.s.l. in the National Park Berchtesgaden (Germany) and analysed traits of butterfly assemblages associated with dispersal capacity, reproductive strategies and developmental time from lowlands to highlands, including phylogenetic analyses. We found a linear decline in butterfly species richness along the altitudinal gradient, but the phylogenetic relatedness of the butterfly assemblages did not increase with altitude. Compared to butterfly assemblages at lower altitudes, those at higher altitudes were composed of species with larger wings (on average 9%) which laid an average of 68% more eggs. In contrast, egg maturation time in butterfly assemblages decreased by about 22% along the altitudinal gradient. Further, butterfly assemblages at higher altitudes were increasingly dominated by less widespread species. Based on our abundance data, but not on data in the literature, population density increased with altitude, suggesting a reversed density-distribution relationship, with higher population densities of habitat specialists in harsh environments. In conclusion, our data provide evidence for significant shifts in the composition of butterfly assemblages and for the dominance of different traits along the altitudinal gradient. In our study, these changes were mainly driven by environmental factors, whereas phylogenetic filtering played a minor role along the studied altitudinal range.

An evaluation of woodland reclamation on strip-mined lands in east Texas

NASA Astrophysics Data System (ADS)

Gorsira, Bryan; Risenhoover, Ken L.

1994-09-01

We compared the composition and structural characteristics of reclaimed and native woody plant communities near Fairfield, Texas, to evaluate the effectiveness of woodland reclamation 3 11 years since establishment. Species composition, foliage density, canopy cover, and woody plant densities were recorded in plots randomly placed along transects bisecting blocks of reclaimed and native woodlands. During summer, vertical foliage densities at heights ≤2 m were similar among native and reclaimed areas. Foliage density and canopy cover declined in reclaimed blocks during winter, but remained relatively constant in native woodlands, where evergreens and vines were more common. Canopy cover was absent in reclaimed woodlands <6 years old but increased with age in 6 to 11-year-old blocks. These data indicated that approximately 27 years will be needed before trees in reclaimed blocks will achieve the stature of canopy trees in native woodlands. Reclaimed woodlands contained different woody plant species and had lower woody stem densities compared to native woodlands. On average, stem densities in reclaimed blocks were six times lower than densities in native woodlands. Comparisons with planting records indicate that survival of most commonly planted woody species was low. Only green ash (Fraxinus pennsylvanica), Russian oliver (Elaeagnus commutata), smooth sumac (Rhus glabra), and redbud (Cercis canadensis) had estimated survival rates >50%. Reclamation procedures used at Big Brown Mine (BBM) during 1981 1988 have not produced woodland habitats with vegetative characteristics comparable to premined woodlands and may not be providing the cover needed to encourage use by certain wildlife species. Procedures for improving woodland reclamation are recommended.

Density variations and their influence on carbon stocks: case-study on two Biosphere Reserves in the Democratic Republic of Congo

NASA Astrophysics Data System (ADS)

De Ridder, Maaike; De Haulleville, Thalès; Kearsley, Elizabeth; Van den Bulcke, Jan; Van Acker, Joris; Beeckman, Hans

2014-05-01

It is commonly acknowledged that allometric equations for aboveground biomass and carbon stock estimates are improved significantly if density is included as a variable. However, not much attention is given to this variable in terms of exact, measured values and density profiles from pith to bark. Most published case-studies obtain density values from literature sources or databases, this way using large ranges of density values and possible causing significant errors in carbon stock estimates. The use of one single fixed value for density is also not recommended if carbon stock increments are estimated. Therefore, our objective is to measure and analyze a large number of tree species occurring in two Biosphere Reserves (Luki and Yangambi). Nevertheless, the diversity of tree species in these tropical forests is too high to perform this kind of detailed analysis on all tree species (> 200/ha). Therefore, we focus on the most frequently encountered tree species with high abundance (trees/ha) and dominance (basal area/ha) for this study. Increment cores were scanned with a helical X-ray protocol to obtain density profiles from pith to bark. This way, we aim at dividing the tree species with a distinct type of density profile into separate groups. If, e.g., slopes in density values from pith to bark remain stable over larger samples of one tree species, this slope could also be used to correct for errors in carbon (increment) estimates, caused by density values from simplified density measurements or density values from literature. In summary, this is most likely the first study in the Congo Basin that focuses on density patterns in order to check their influence on carbon stocks and differences in carbon stocking based on species composition (density profiles ~ temperament of tree species).

Water quality, physical habitat, and fish community composition in streams in the Twin Cities metropolitan area, Minnesota, 1997-98

USGS Publications Warehouse

Talmage, Philip J.; Lee, Kathy E.; Goldstein, Robert M.; Anderson, Jesse P.; Fallon, James D.

1999-01-01

Water quality, physical habitat, and fish-community composition were characterized at 13 Twin Cities metropolitan area streams during low-flow conditions, September 1997. Fish communities were resampled during September 1998. Sites were selected based on a range of human population density. Nutrient concentrations were generally low, rarely exceeding concentrations found in agricultural streams or water-quality criteria. Seventeen pesticides and five pesticide metabolites were detected, with atrazine being the only pesticide detected at all 13 streams. Colony counts of fecal coliform bacteria ranged from 54 to greater than 11,000 colonies per 100 mL. Instream fish habitat was sparse with little woody debris and few boulders, cobble, or other suitable fish habitat. Thirty-eight species and one hybrid from 10 families were collected. Fish communities were characterized by high percentages of omnivores and tolerant species with few intolerant species. Index of Biotic Integrity scores were low, with most streams rating fair to very poor. Percent impervious surface was positively correlated with sodium and chloride concentrations and human population density, but was negatively correlated with fish species richness and diversity. Urban land use and human population density influence fish communities and water quality in Twin Cities metropolitan area streams. Other factors that may influence fish community composition include percent impervious cover, water chemistry, water temperature, geomorphology, substrate, instream habitat, and migration barriers.

The factors controlling species density in herbaceous plant communities: An assessment

USGS Publications Warehouse

Grace, J.B.

1999-01-01

This paper evaluates both the ideas and empirical evidence pertaining to the control of species density in herbaceous plant communities. While most theoretical discussions of species density have emphasized the importance of habitat productivity and disturbance regimes, many other factors (e.g. species pools, plant litter accumulation, plant morphology) have been proposed to be important. A review of literature presenting observations on the density of species in small plots (in the vicinity of a few square meters or less), as well as experimental studies, suggests several generalizations: (1) Available data are consistent with an underlying unimodal relationship between species density and total community biomass. While variance in species density is often poorly explained by predictor variables, there is strong evidence that high levels of community biomass are antagonistic to high species density. (2) Community biomass is just one of several factors affecting variations in species density. Multivariate analyses typically explain more than twice as much variance in species density as can be explained by community biomass alone. (3) Disturbance has important and sometimes complex effects on species density. In general, the evidence is consistent with the intermediate disturbance hypothesis but exceptions exist and effects can be complex. (4) Gradients in the species pool can have important influences on patterns of species density. Evidence is mounting that a considerable amount of the observed variability in species density within a landscape or region may result from environmental effects on the species pool. (5) Several additional factors deserve greater consideration, including time lags, species composition, plant morphology, plant density and soil microbial effects. Based on the available evidence, a conceptual model of the primary factors controlling species density is presented here. This model suggests that species density is controlled by the effects of disturbance, total community biomass, colonization, the species pool and spatial heterogeneity. The structure of the model leads to two main expectations: (1) while community biomass is important, multivariate approaches will be required to understand patterns of variation in species density, and (2) species density will be more highly correlated with light penetration to the soil surface, than with above-ground biomass, and even less well correlated with plant growth rates (productivity) or habitat fertility. At present, data are insufficient to evaluate the relative importance of the processes controlling species density. Much more work is needed if we are to adequately predict the effects of environmental changes on plant communities and species diversity.

Occurrence of species-rich crab fauna in a human-impacted mangrove forest questions the application of community analysis as an environmental assessment tool

NASA Astrophysics Data System (ADS)

Geist, Simon Joscha; Nordhaus, Inga; Hinrichs, Saskia

2012-01-01

Diversity and composition of the intertidal brachyuran crab community in the Segara Anakan Lagoon (SAL), Java, Indonesia, during the dry season of 2005 and the rainy season of 2006, shows that crab community composition and structure alone appeared to be poor indicators for the state of a forest in terms of tree diversity and wood-cutting intensity. The lagoon is surrounded by the largest mangrove stand in Java and is under constant anthropogenic pressure, mainly due to logging, land conversion for agriculture, overfishing and industrial pollution. This study aims to determine the crab community composition at different sites of the lagoon in relation to vegetation composition and sediment parameters. In addition it investigates if mangrove crabs can be used as bioindicators to describe the environmental state of mangrove forests (tree diversity, degree of logging). It was assumed to find a low crab diversity and species richness and a strong dominance of a single species at highly disturbed forest sites compared to moderately disturbed sites. A stratified, hierarchical design was used to sample the crab fauna at 13 stations distributed over the entire lagoon. Additionally, abiotic parameters and vegetation composition were recorded. In total 6463 crabs were caught belonging to 49 species, 5 superfamilies and 10 families, with Ocypodidae and Sesarmidae being the families of most note. Mean density of adult crabs was 27.7 individuals*m -2 and mean biomass was 12.8 g wet mass*m -2 or 1.3 g ash free dry mass*m -2. Density and biomass varied strongly within and between stations but they where within the range reported for other mangrove forests of the Indo-West-Pacific. Species composition was significantly different between stations. The distribution of facultatively leaf-feeding grapsid crabs was related to vegetation parameters (tree, seedling and undergrowth density), but the occurrence of single crab and tree species was not correlated. The distribution of ocypodid crabs, feeding on detritus and microphytobenthos, correlated with sediment characteristics like median grain size and organic content. The crab community was strongly dominated by one species at six stations, however, this was not correlated to the degree of logging. Leaf-feeding crab and mangrove tree diversity was correlated at areas of one hectare (stations), but not at a lower spatial scale (areas of 100 m 2, "zone"). Species richness of leaf-feeding crabs was not linked to forest diversity. Hence a functional relation between leaf-feeding crab and tree species diversity could not be proven.

Response of AM fungi spore population to elevated temperature and nitrogen addition and their influence on the plant community composition and productivity

PubMed Central

Zhang, Tao; Yang, Xue; Guo, Rui; Guo, Jixun

2016-01-01

To examine the influence of elevated temperature and nitrogen (N) addition on species composition and development of arbuscular mycorrhizal fungi (AMF) and the effect of AMF on plant community structure and aboveground productivity, we conducted a 5-year field experiment in a temperate meadow in northeast China and a subsequent greenhouse experiment. In the field experiment, N addition reduced spore population diversity and richness of AMF and suppressed the spore density and the hyphal length density (HLD). Elevated temperature decreased spore density and diameter and increased the HLD, but did not affect AMF spore population composition. In the greenhouse experiment, AMF altered plant community composition and increased total aboveground biomass in both elevated temperature and N addition treatments; additionally, AMF also increased the relative abundance and aboveground biomass of the grasses Leymus chinensis (Poaceae) and Setaria viridis (Gramineae) and significantly reduced the relative abundance and aboveground biomass of the Suaeda corniculata (Chenopodiaceae). Although elevated temperature and N addition can affect species composition or suppress the development of AMF, AMF are likely to play a vital role in increasing plant diversity and productivity. Notably, AMF might reduce the threat of climate change induced degradation of temperate meadow ecosystems. PMID:27098761

Response of AM fungi spore population to elevated temperature and nitrogen addition and their influence on the plant community composition and productivity

NASA Astrophysics Data System (ADS)

Zhang, Tao; Yang, Xue; Guo, Rui; Guo, Jixun

2016-04-01

To examine the influence of elevated temperature and nitrogen (N) addition on species composition and development of arbuscular mycorrhizal fungi (AMF) and the effect of AMF on plant community structure and aboveground productivity, we conducted a 5-year field experiment in a temperate meadow in northeast China and a subsequent greenhouse experiment. In the field experiment, N addition reduced spore population diversity and richness of AMF and suppressed the spore density and the hyphal length density (HLD). Elevated temperature decreased spore density and diameter and increased the HLD, but did not affect AMF spore population composition. In the greenhouse experiment, AMF altered plant community composition and increased total aboveground biomass in both elevated temperature and N addition treatments; additionally, AMF also increased the relative abundance and aboveground biomass of the grasses Leymus chinensis (Poaceae) and Setaria viridis (Gramineae) and significantly reduced the relative abundance and aboveground biomass of the Suaeda corniculata (Chenopodiaceae). Although elevated temperature and N addition can affect species composition or suppress the development of AMF, AMF are likely to play a vital role in increasing plant diversity and productivity. Notably, AMF might reduce the threat of climate change induced degradation of temperate meadow ecosystems.

Stand density, stand structure, and species composition in transition oak stands of northwestern Pennsylvania

Treesearch

S.L. Stout

1991-01-01

Transition stands, those containing species associated with both the northern hardwood and oak-hickory forest types, are important to forest diversity in northwestern Pennsylvania. These stands have high value for a variety of forest uses, including timber production, wildlife habitat, and aesthetics. Diameter distributions are characteristically stratified by species...

Relative Contribution of Matrix Structure, Patch Resources and Management to the Local Densities of Two Large Blue Butterfly Species

PubMed Central

Skórka, Piotr; Nowicki, Piotr; Bonk, Maciej; Król, Wiesław; Szpiłyk, Damian; Woyciechowski, Michal

2016-01-01

The type of matrix, the landscape surrounding habitat patches, may determine the distribution and function of local populations. However, the matrix is often heterogeneous, and its various components may differentially contribute to metapopulation processes at different spatial scales, a phenomenon that has rarely been investigated. The aim of this study was to estimate the relative importance of matrix composition and spatial scale, habitat quality, and management intensity on the occurrence and density of local populations of two endangered large blue butterflies: Phengaris teleius and P. nausithous. Presence and abundance data were assessed over two years, 2011–12, in 100 local patches within two heterogeneous regions (near Kraków and Tarnów, southern Poland). The matrix composition was analyzed at eight spatial scales. We observed high occupancy rates in both species, regions and years. With the exception of area and isolation, almost all of the matrix components contributed to Phengaris sp. densities. The different matrix components acted at different spatial scales (grassland cover within 4 and 3 km, field cover within 0.4 and 0.3 km and water cover within 4 km radii for P. teleius and P. nausithous, respectively) and provided the highest independent contribution to the butterfly densities. Additionally, the effects of a 0.4 km radius of forest cover and a food plant cover on P. teleius, and a 1 km radius of settlement cover and management intensity on P. nausithous densities were observed. Contrary to former studies we conclude that the matrix heterogeneity and spatial scale rather than general matrix type are of relevance for densities of butterflies. Conservation strategies for these umbrella species should concentrate on maintaining habitat quality and managing matrix composition at the most appropriate spatial scales. PMID:28005942

Relative Contribution of Matrix Structure, Patch Resources and Management to the Local Densities of Two Large Blue Butterfly Species.

PubMed

Kajzer-Bonk, Joanna; Skórka, Piotr; Nowicki, Piotr; Bonk, Maciej; Król, Wiesław; Szpiłyk, Damian; Woyciechowski, Michal

2016-01-01

The type of matrix, the landscape surrounding habitat patches, may determine the distribution and function of local populations. However, the matrix is often heterogeneous, and its various components may differentially contribute to metapopulation processes at different spatial scales, a phenomenon that has rarely been investigated. The aim of this study was to estimate the relative importance of matrix composition and spatial scale, habitat quality, and management intensity on the occurrence and density of local populations of two endangered large blue butterflies: Phengaris teleius and P. nausithous. Presence and abundance data were assessed over two years, 2011-12, in 100 local patches within two heterogeneous regions (near Kraków and Tarnów, southern Poland). The matrix composition was analyzed at eight spatial scales. We observed high occupancy rates in both species, regions and years. With the exception of area and isolation, almost all of the matrix components contributed to Phengaris sp. densities. The different matrix components acted at different spatial scales (grassland cover within 4 and 3 km, field cover within 0.4 and 0.3 km and water cover within 4 km radii for P. teleius and P. nausithous, respectively) and provided the highest independent contribution to the butterfly densities. Additionally, the effects of a 0.4 km radius of forest cover and a food plant cover on P. teleius, and a 1 km radius of settlement cover and management intensity on P. nausithous densities were observed. Contrary to former studies we conclude that the matrix heterogeneity and spatial scale rather than general matrix type are of relevance for densities of butterflies. Conservation strategies for these umbrella species should concentrate on maintaining habitat quality and managing matrix composition at the most appropriate spatial scales.

The diversity of beetle assemblages in different habitat types in Sabah, Malaysia.

PubMed

Chung, A Y; Eggleton, P; Speight, M R; Hammond, P M; Chey, V K

2000-12-01

The diversity of beetle assemblages in different habitat types (primary forest, logged forest, acacia plantation and oil palm plantation) in Sabah, Malaysia was investigated using three different methods based on habitat levels (Winkler sampling, flight-interception-trapping and mist-blowing). The overall diversity was extremely high, with 1711 species recorded from only 8028 individuals and 81 families (115 family and subfamily groups). Different degrees of environmental changes had varying effects on the beetle species richness and abundance, with oil palm plantation assemblage being most severely affected, followed by acacia plantation and then logged forest. A few species became numerically dominant in the oil palm plantation. In terms of beetle species composition, the acacia fauna showed much similarity with the logged forest fauna, and the oil palm fauna was very different from the rest. The effects of environmental variables (number of plant species, sapling and tree densities, amount of leaf litter, ground cover, canopy cover, soil pH and compaction) on the beetle assemblage were also investigated. Leaf litter correlated with species richness, abundance and composition of subterranean beetles. Plant species richness, tree and sapling densities correlated with species richness, abundance and composition of understorey beetles while ground cover correlated only with the species richness and abundance of these beetles. Canopy cover correlated only with arboreal beetles. In trophic structure, predators represented more than 40% of the species and individuals. Environmental changes affected the trophic structure with proportionally more herbivores (abundance) but fewer predators (species richness and abundance) in the oil palm plantation. Biodiversity, conservation and practical aspects of pest management were also highlighted in this study.

Leaf Litter Chemistry Drives the Structure and Composition of Soil Testate Amoeba Communities in a Tropical Montane Rainforest of the Ecuadorian Andes.

PubMed

Krashevska, Valentyna; Sandmann, Dorothee; Marian, Franca; Maraun, Mark; Scheu, Stefan

2017-10-01

We investigated the role of leaf litter chemistry and richness in affecting testate amoeba communities of tropical rainforest in the Ecuadorian Andes. Litterbags containing leaf litter from four dominating tree species (Clusia sp., Myrcia pubescens, Graffenrieda emarginata, and Cecropia andina) with richness 1, 2, and 4 species were established and exposed in the field for 12 months at 2000 m a.s.l. Chemical elements and compounds of leaf litter were analyzed before exposure. At the end of exposure, microbial biomass and litter mass loss were measured, and living testate amoeba species number, density, biomass, and community composition were determined. In total, 125 testate amoeba species colonized the litter in litterbags. The results suggest that high litter nitrogen and low lignin concentrations are indicators of high litter quality for testate amoebae density and species richness. Their species number and density significantly declined in the order 1 > 4 > 2 leaf litter species and varied with leaf litter chemistry being at a maximum in high-quality single leaf litter species and low in low-quality leaf litter. Further, the addition of litter of high-quality to low-quality litter increased testate amoebae biomass and density; however, the values did not exceed the ones in single high-quality litter treatments. Moreover, the structure of testate amoeba communities varied with litter chemistry, with Fe, Na, lignin, and litter C-to-N ratio being of major importance, and indicating that litter chemistry reflects habitat quality for testate amoebae. Overall, the data show that leaf litter chemistry overrides leaf litter richness in structuring testate amoeba communities.

Spatial match-mismatch between juvenile fish and prey provides a mechanism for recruitment variability across contrasting climate conditions in the eastern Bering Sea.

PubMed

Siddon, Elizabeth Calvert; Kristiansen, Trond; Mueter, Franz J; Holsman, Kirstin K; Heintz, Ron A; Farley, Edward V

2013-01-01

Understanding mechanisms behind variability in early life survival of marine fishes through modeling efforts can improve predictive capabilities for recruitment success under changing climate conditions. Walleye pollock (Theragra chalcogramma) support the largest single-species commercial fishery in the United States and represent an ecologically important component of the Bering Sea ecosystem. Variability in walleye pollock growth and survival is structured in part by climate-driven bottom-up control of zooplankton composition. We used two modeling approaches, informed by observations, to understand the roles of prey quality, prey composition, and water temperature on juvenile walleye pollock growth: (1) a bioenergetics model that included local predator and prey energy densities, and (2) an individual-based model that included a mechanistic feeding component dependent on larval development and behavior, local prey densities and size, and physical oceanographic conditions. Prey composition in late-summer shifted from predominantly smaller copepod species in the warmer 2005 season to larger species in the cooler 2010 season, reflecting differences in zooplankton composition between years. In 2010, the main prey of juvenile walleye pollock were more abundant, had greater biomass, and higher mean energy density, resulting in better growth conditions. Moreover, spatial patterns in prey composition and water temperature lead to areas of enhanced growth, or growth 'hot spots', for juvenile walleye pollock and survival may be enhanced when fish overlap with these areas. This study provides evidence that a spatial mismatch between juvenile walleye pollock and growth 'hot spots' in 2005 contributed to poor recruitment while a higher degree of overlap in 2010 resulted in improved recruitment. Our results indicate that climate-driven changes in prey quality and composition can impact growth of juvenile walleye pollock, potentially severely affecting recruitment variability.

[Distribution and species composition of hyporheic macroinvertebrates in a mountain stream].

PubMed

Zhang, Yue-wei; Yuan, Xing-zhong; Liu, Hong; Ren, Hai-qing; Deng, Wei; Wang, Xiao-feng

2015-09-01

Hyporheic macroinvertebrates are an important component of stream ecosystem. The composition and distribution of the hyporheic macroinvertebrates were investigated using artificial substrates in the upper reaches of Heishuitan River in August, December 2013 and April 2014. The results indicated that a total of 27 microinvertbrate species were identified in all three seasons. In summer, 22 species were identified, accounting for 81.8% of aquatic insects. 16 species were identified both in winter and spring, accounting for 75.0% and 62.5% of aquatic insects, respectively. The density of macroinvertebrate assemblage was significantly lower in summer than in winter and spring, and was the highest in spring. The biomass of macroinvertebrate assemblage was significantly higher in winter than in summer and spring, and was the lowest in summer. Species richness, Shannon index and Pielou index all had no significant difference among the three seasons. The density and richness of macroinvertebrates decreased with bed depth, and the maximum invertebrate density was found within the top 20 cm of the stream bed. Collector-filterer and collector-gatherer were the dominant functional feeding group in all three seasons. The community structure and temporal-spatial distribution of macroinvertebrates were determined by interactions and life history strategy of macroinvertebrates, and physical-chemical factors of hyporheic zone.

Alteration Of Nutrient Status By Manipulation Of Composition And Density In A Shortleaf Pine-Hardwood Stand

Treesearch

Hal O. Liechty; Valerie L. Sawyer; Michael G. Shelton

2002-01-01

Abstract - Uneven-aged management is used to promote adequate pine reproduction and control species composition of shortleaf pine (Pinus echinata Mill.)-hardwood stands in the Interior Highlands of the southern United States. The modification of pine-hardwood composition in these stands has the potential to alter nutrient pools and availability since...

Decreasing seagrass density negatively influences associated fauna

PubMed Central

McCloskey, Rosemary M.

2015-01-01

Seagrass meadows globally are disappearing at a rapid rate with physical disturbances being one of the major drivers of this habitat loss. Disturbance of seagrass can lead to fragmentation, a reduction in shoot density, canopy height and coverage, and potentially permanent loss of habitat. Despite being such a widespread issue, knowledge of how such small scale change affects the spatial distribution and abundances of motile fauna remains limited. The present study investigated fish and macro faunal community response patterns to a range of habitat variables (shoot length, cover and density), including individual species habitat preferences within a disturbed and patchy intertidal seagrass meadow. Multivariate analysis showed a measurable effect of variable seagrass cover on the abundance and distribution of the fauna, with species specific preferences to both high and low seagrass cover seagrass. The faunal community composition varied significantly with increasing/decreasing cover. The faunal species composition of low cover seagrass was more similar to sandy control plots than to higher cover seagrass. Shannon Wiener Diversity (H′) and species richness was significantly higher in high cover seagrass than in low cover seagrass, indicating increasing habitat value as density increases. The results of this study underline how the impacts of small scale disturbances from factors such as anchor damage, boat moorings and intertidal vehicle use on seagrass meadows that reduce shoot density and cover can impact upon associated fauna. These impacts have negative consequences for the delivery of ecosystem services such as the provision of nursery habitat. PMID:26137432

Floating macro-litter along the Mediterranean French coast: Composition, density, distribution and overlap with cetacean range.

PubMed

Di-Méglio, Nathalie; Campana, Ilaria

2017-05-15

This study investigated the composition, density and distribution of floating macro-litter along the Liguro-Provençal basin with respect to cetaceans presence. Survey transects were performed in summer between 2006 and 2015 from sailing vessels with simultaneous cetaceans observations. During 5171km travelled, 1993 floating items were recorded, widespread in the whole study area. Plastics was the predominant category, with bags/packaging always representing >45% of total items. Overall mean density (14.98 items/km 2 ) was stable with significant increase reported only in 2010-2011; monthly analysis showed lower litter densities in July-September, suggesting possible seasonal patterns. Kernel density estimation for plastics revealed ubiquitous distribution rather than high accumulation areas, mainly due to the circulation dynamics of this area. The presence range of cetaceans (259 sightings, 6 species) corresponded by ~50% with plastic distribution, indicating high potential of interaction, especially in the eastern part of the area, but effective risks for marine species might be underrepresented. Copyright © 2017 Elsevier Ltd. All rights reserved.

Soil chemical factors and grassland species density in Emas National Park (central Brazil).

PubMed

Amorim, P K; Batalha, M A

2008-05-01

Studies of grasslands on specific soil types suggest that different nutrients can limit biomass production and, hence, species composition and number. The Brazilian cerrado is the major savanna region in America and once covered about 2 million km(2), mainly in the Brazilian Central Plateau, under seasonal climate, with wet summer and dry winter. In view of the importance of soil chemical factors in the distribution of the vegetation forms within the Cerrado domain and which may influence the number of species, we analyzed some soil characteristics in three herbaceous vegetation forms -- hyperseasonal cerrado, seasonal cerrado, and wet grassland -- in Emas National Park, a core cerrado site, to investigate the relationship between number of species and soil characteristics. We collected vegetation and soil samples in these three vegetation forms and submitted the obtained data to multiple linear regression. We found out that aluminum and pH were the best predictors of species density, the former positively related to species density and the latter negatively related. Since the predictable variation in species density is important in determining areas of conservation, we can postulate that these two soil factors are indicators of high species density areas in tropical grasslands, which could be used in selecting priority sites for conservation.

Drier Forest Composition Associated with Hydrologic Change in the Apalachicola River, Florida

USGS Publications Warehouse

Darst, Melanie R.; Light, Helen M.

2008-01-01

Forests of the Apalachicola River floodplain had shorter flood durations, were drier in composition, and had 17 percent fewer trees in 2004 than in 1976. The change to drier forest composition is expected to continue for at least 80 more years. Floodplain drying was caused by large declines in river levels resulting from erosion of the river channel after 1954 and from decreased flows in spring and summer months since the 1970s. Water-level declines have been greatest at low and medium flows, which are the most common flows (occurring about 80 percent of the time). Water levels have remained relatively unchanged during large floods which continue to occur about three times per decade. A study conducted by the U.S. Geological Survey compared temporal changes in hydrologic conditions, forest composition, forest characteristics, and individual species of trees, as well as estimated the potential for change in composition of floodplain forests in the nontidal reach of the Apalachicola River. The study was conducted with the cooperation of the Florida Department of Environmental Protection and the Northwest Florida Water Management District. Forest composition and field observations from studies conducted in 1976-1984 (termed '1976 data') were used as baseline data for comparison with data from plots sampled in 2004-2006 ('2004 data'). Flood durations were shorter in all periods subsequent to 1923-1976. The periods of record used to calculate flood durations for forest data were subsets of the complete record available (1923-2004). At sampled plots in all forest types and reaches combined, flood durations changed an average of more than 70 percent toward the baseline flood duration of the next drier forest type. For all forest types, changes in flood durations toward the next drier type were greatest in the upper reach (95.9 percent) and least in the lower reach (42.0 percent). All forests are expected to be 38.2 percent drier in species composition by 2085, the year when the median age of surviving 2004 subcanopy trees will reach the median age (99 years) of the 2004 large canopy trees. The change will be greatest for forests in the upper reach (45.0 percent). Forest composition changes from pre-1954 to 2085 were calculated using Floodplain Indices from 1976 and 2004 tree-size classes and replicate plots. Species composition in high bottomland hardwood forests is expected to continue to change, and some low bottomland hardwood forests are expected to become high bottomland hardwood forests. Organisms associated with floodplain forests will be affected by the changes in tree species, which will alter the timing of leaf-out, fruiting, and leaf-drop, the types of fruit and debris produced, and soil chemistry. Swamps will contain more bottomland hardwood species, but will also have an overall loss of tree density. The density of trees in swamps significantly decreased by 37 percent from 1976 to 2004. Of the estimated 4.3 million (17 percent) fewer trees that existed in the nontidal floodplain in 2004 than in 1976, 3.3 million trees belonged to four swamp species: popash, Ogeechee tupelo, water tupelo, and bald cypress. Water tupelo, the most important tree in the nontidal floodplain in terms of basal area and density, has declined in number of trees by nearly 20 percent since 1976. Ogeechee tupelo, the species valuable to the tupelo honey industry, has declined in number of trees by at least 44 percent. Greater hydrologic variability in recent years may be the reason swamps have had a large decrease in tree density. Drier conditions are detrimental for the growth of swamp species, and periodic large floods kill invading bottomland hardwood trees. The loss of canopy density in swamps may result in the swamp floor being exposed to more light with an increase in the amount of ground cover present, which in turn, would reduce tree replacement. The microclimate of the swamp floor would become wa

Food availability in exotic grasslands: a potential mechanism for depauperate breeding assemblages

USGS Publications Warehouse

George, Andrew D.; O'Connell, Timothy J.; Hickman, Karen R.; Leslie, David M.

2013-01-01

We investigated the influence of Old World bluestem (Bothriochloa ischaemum; OWB) monocultures on grassland bird abundance through analysis of vegetation structure and food availability. We compared breeding bird density, vegetation structure and composition, and arthropod biomass between six native grass and six OWB fields in the southern Great Plains. The OWB fields supported 1.70 ± 0.27 (mean ± SE) Grasshopper Sparrows (Ammodramus savannarum) per ha compared to 0.95 ± 0.25 in native grass fields, but total species richness was greater in native grass fields (40 versus 28 species). Density of some bird species was correlated with vegetation structure regardless of field type, suggesting that management practices may be more influential than plant species composition. Mean arthropod biomass was 3.39× greater in native grass fields than in OWB monocultures. Native grass fields provided habitat for a larger complement of birds than did OWB monocultures, and reduced food availability in OWB fields suggests a mechanism for that difference.

Assembly-history dynamics of a pitcher-plant protozoan community in experimental microcosms.

PubMed

Kadowaki, Kohmei; Inouye, Brian D; Miller, Thomas E

2012-01-01

History drives community assembly through differences both in density (density effects) and in the sequence in which species arrive (sequence effects). Density effects arise from predictable population dynamics, which are free of history, but sequence effects are due to a density-free mechanism, arising solely from the order and timing of immigration events. Few studies have determined how components of immigration history (timing, number of individuals, frequency) alter local dynamics to determine community assembly, beyond addressing when immigration history produces historically contingent assembly. We varied density and sequence effects independently in a two-way factorial design to follow community assembly in a three-species aquatic protozoan community. A superior competitor, Colpoda steinii, mediated alternative community states; early arrival or high introduction density allowed this species to outcompete or suppress the other competitors (Poterioochromonas malhamensis and Eimeriidae gen. sp.). Multivariate analysis showed that density effects caused greater variation in community states, whereas sequence effects altered the mean community composition. A significant interaction between density and sequence effects suggests that we should refine our understanding of priority effects. These results highlight a practical need to understand not only the "ingredients" (species) in ecological communities but their "recipes" as well.

Intensive Selective Deer Browsing Favors Success of Asimina triloba (Paw Paw) a Native Tree Species

Treesearch

Mitchell A. Slater; Roger C. Anderson

2014-01-01

Although white-tailed deer (Odocoileus virginianus Zimmermann) are generalist herbivores, they can have significant effects on species composition and abundance of forest trees, especially when deer densities are high and most plant species are heavily browsed but a few are selectively avoided as browse. We evaluated effects of selective deer...

Effects of dredging operations on the demersal fish fauna of a South American tropical-subtropical transition estuary.

PubMed

Barletta, M; Cysneiros, F J A; Lima, A R A

2016-07-01

Changes in the environment and in the composition of fish assemblages in the Paranaguá Estuary (South Brazil) were assessed by comparisons made before, during and after dredging operations, in the same months and areas studied in the previous year. Interactions between year and month were observed for salinity. During the dredging year fish total density was 2 individuals m(-2) and with a total biomass of 104 g m(-2) (among 31 species captured). For the same period the year before, 0·3 individuals m(-2) and 3 g m(-2) were captured (38 species). The number of species showed significant time v. month interactions, assuming that fish species composition varied for both year and month. Total mean density and biomass showed significant differences for interaction time v. month, and density and biomass in the dredging month September 2001 in the main channel were scientifically different from other months. Interaction times v. area were significant for Cathorops spixii (increased biomass), Aspistor luniscutis (increased density), Menticirrhus americanus (decreased biomass) and Cynoscion leiarchus (decreased density and biomass). This suggests that during the dredging process there is a change in the structure of the demersal fish assemblage. The impact (damage and mortality) induced by dredging on the macrobenthic animals along the dredge path attracted adults of C. spixii that reached densities 10 times greater than in the year before. On the other hand, sciaenid species practically disappeared. To contribute to the conservation of the estuarine fish fauna, and maintain fisheries production of the Paranaguá Estuary and surrounding areas, it is recommended that, dredging should be done from the late rainy season to the early dry season. Decisions must take into account the ecological cycles of socio-economically important fish species and prioritize the safe disposal of dredged spoils. © 2016 The Fisheries Society of the British Isles.

Microbial community structure and density under different tree species in an acid forest soil (Morvan, France).

PubMed

Lejon, David P H; Chaussod, Rémi; Ranger, Jacques; Ranjard, Lionel

2005-11-01

Overexploitation of forests to increase wood production has led to the replacement of native forest by large areas of monospecific tree plantations. In the present study, the effects of different monospecific tree cover plantations on density and composition of the indigenous soil microbial community are described. The experimental site of "Breuil-Chenue" in the Morvan (France) was the site of a comparison of a similar mineral soil under Norway spruce (Picea abies), Douglas fir (Pseudotuga menziesii), oak (Quercus sessiflora), and native forest [mixed stand dominated by oak and beech (Fagus sylvatica)]. Sampling was performed during winter (February) at three depths (0-5, 5-10, and 10-15 cm). Abundance of microorganisms was estimated via microbial biomass measurements, using the fumigation-extraction method. The genetic structure of microbial communities was investigated using the bacterial- and fungal-automated ribosomal intergenic spacer analysis (B-ARISA and F-ARISA, respectively) DNA fingerprint. Only small differences in microbial biomass were observed between tree species, the highest values being recorded under oak forest and the lowest under Douglas fir. B- and F-ARISA community profiles of the different tree covers clustered separately, but noticeable similarities were observed for soils under Douglas fir and oak. A significant stratification was revealed under each tree species by a decrease in microbial biomass with increasing depths and by distinct microbial communities for each soil layer. Differences in density and community composition according to tree species and depth were related to soil physicochemical characteristics and organic matter composition.

Seasonal variation in species composition and abundance of demersal fish and invertebrates in a Seagrass Natural Reserve on the eastern coast of the Shandong Peninsula, China

NASA Astrophysics Data System (ADS)

Xu, Qiang; Guo, Dong; Zhang, Peidong; Zhang, Xiumei; Li, Wentao; Wu, Zhongxin

2016-03-01

Seagrass habitats are structurally complex ecosystems, which support high productivity and biodiversity. In temperate systems the density of seagrass may change seasonally, and this may influence the associated fish and invertebrate community. Little is known about the role of seagrass beds as possible nursery areas for fish and invertebrates in China. To study the functioning of a seagrass habitat in northern China, demersal fish and invertebrates were collected monthly using traps, from February 2009 to January 2010. The density, leaf length and biomass of the dominant seagrass Zostera marina and water temperature were also measured. The study was conducted in a Seagrass Natural Reserve (SNR) on the eastern coast of the Shandong Peninsula, China. A total of 22 fish species and five invertebrate species were recorded over the year. The dominant fish species were Synechogobius ommaturus, Sebastes schlegelii, Pholis fangi, Pagrus major and Hexagrammos otakii and these species accounted for 87% of the total number of fish. The dominant invertebrate species were Charybdis japonica and Octopus variabilis and these accounted for 98% of the total abundance of invertebrates. There was high temporal variation in species composition and abundance. The peak number of fish species occurred in August-October 2009, while the number of individual fish and biomass was highest during November 2009. Invertebrate numbers and biomass was highest in March, April, July and September 2009. Temporal changes in species abundance of fishes and invertebrates corresponded with changes in the shoot density and leaf length of the seagrass, Zostera marina.

Planted and natural tree seedling survival and density in three floodplain restorations on abandoned agricultural fields

Treesearch

Allen E. Plocher

2003-01-01

In three floodplain forest restorations, established in abandoned agricultural fields in Illinois, permanent plots were sampled for 3 years to determine survivorship and density of planted tree seedlings, and species composition and density of natural regeneration. Planted tree survivorship decreased over time at all sites and after 3 years ranged from 32 to 61 percent...

High-density native-range species affects the invasive plant Chromolaena odorata more strongly than species from its invasive range.

PubMed

Zheng, Yulong; Liao, Zhiyong

2017-11-22

Invasive plant species often form dense mono-dominant stands in areas they have invaded, while having only sparse distribution in their native ranges, and the reasons behind this phenomenon are a key point of research in invasive species biology. Differences in species composition between native and invasive ranges may contribute to the difference in distribution status. In this study, we found that the high-density condition had a more negative effect on C. odorata than the low-density condition when co-grown with neighbor plants from its native range in Mexico, while this pattern was not in evidence when it was grown with neighbors from its invasive range in China. Different competitive ability and coevolutionary history with C. odorata between native-range neighbors and invasive-range neighbors may lead to the inconsistent patterns.

Rain forest fragmentation and the proliferation of successional trees.

PubMed

Laurance, William F; Nascimento, Henrique E M; Laurance, Susan G; Andrade, Ana C; Fearnside, Philip M; Ribeiro, José E L; Capretz, Robson L

2006-02-01

The effects of habitat fragmentation on diverse tropical tree communities are poorly understood. Over a 20-year period we monitored the density of 52 tree species in nine predominantly successional genera (Annona, Bellucia, Cecropia, Croton, Goupia, Jacaranda, Miconia, Pourouma, Vismia) in fragmented and continuous Amazonian forests. We also evaluated the relative importance of soil, topographic, forest dynamic, and landscape variables in explaining the abundance and species composition of successional trees. Data were collected within 66 permanent 1-ha plots within a large (approximately 1000 km2) experimental landscape, with forest fragments ranging from 1 to 100 ha in area. Prior to forest fragmentation, successional trees were uncommon, typically comprising 2-3% of all trees (> or =10 cm diameter at breast height [1.3 m above the ground surface]) in each plot. Following fragmentation, the density and basal area of successional trees increased rapidly. By 13-17 years after fragmentation, successional trees had tripled in abundance in fragment and edge plots and constituted more than a quarter of all trees in some plots. Fragment age had strong, positive effects on the density and basal area of successional trees, with no indication of a plateau in these variables, suggesting that successional species could become even more abundant in fragments over time. Nonetheless, the 52 species differed greatly in their responses to fragmentation and forest edges. Some disturbance-favoring pioneers (e.g., Cecropia sciadophylla, Vismia guianensis, V. amazonica, V. bemerguii, Miconia cf. crassinervia) increased by >1000% in density on edge plots, whereas over a third (19 of 52) of all species remained constant or declined in numbers. Species responses to fragmentation were effectively predicted by their median growth rate in nearby intact forest, suggesting that faster-growing species have a strong advantage in forest fragments. An ordination analysis revealed three main gradients in successional-species composition across our study area. Species gradients were most strongly influenced by the standlevel rate of tree mortality on each plot and by the number of nearby forest edges. Species-composition also varied significantly among different cattle ranches, which differed in their surrounding matrices and disturbance histories. These same variables were also the best predictors of total successional-tree abundance and species richness. Successional-tree assemblages in fragment interior plots (>150 m from edge), which are subjected to fragment area effects but not edge effects, did not differ significantly from those in intact forest, indicating that area effects per se had little influence on successional trees. Soils and topography also had little discernable effect on these species. Collectively, our results indicate that successional-tree species proliferate rapidly in fragmented Amazonian forests, largely as a result of chronically elevated tree mortality near forest edges and possibly an increased seed rain from successional plants growing in nearby degraded habitats. The proliferation of fast-growing successional trees and correlated decline of old-growth trees will have important effects on species composition, forest dynamics, carbon storage, and nutrient cycling in fragmented forests.

Ciliate protozoa in the forestomach of the dromedary camel, (Camelus dromedarius), in Egypt, with description of a new species.

PubMed

Selim, H M; Imai, S; Yamato, O; Miyagawa, E; Maede, Y

1996-09-01

The composition of ciliates obtained from the forestomachs of eleven dromedary (one-humped) camels in Egypt was examined. As a result, eight genera containing 24 species with 11 forms were identified. Of them, one species was concluded to be new, then described as Dasytricha kabanii n. sp. This new species was clearly distinguished from D. ruminantium, the other species of the genus, by its lack of somatic cilia on the posterior one-fifth of the body surface. Entodinium nanellum and Epidinium ecaudatum f. caudatum were found in all camels examined. Although the percentage composition of respective species varied with the individual camel, the rate of Entodinium spp. was high in general. Total ciliate density in forestomach fluid was 1.9 x 10(5)/ml on average. Ciliate composition in Egyptian camels was similar to that in Bactrian camels, Camelus bactrianus, in China reported previously. However, more Entodinium species were detected from Egyptian camels than from Bactrian camels.

Harmful Algae Bloom Occurrence in Urban Ponds: Relationship of Toxin Levels with Cell Density and Species Composition

EPA Science Inventory

Retention ponds constructed within urban watershed areas of high density populations are common as a result of green infrastructure applications. Several urban ponds in the Northern Kentucky area were monitored for algal community (algae and cyanobacteria) from October 2012 to Se...

Differentiating aquatic plant communities in a eutrophic river using hyperspectral and multispectral remote sensing

USGS Publications Warehouse

Tian, Y.Q.; Yu, Q.; Zimmerman, M.J.; Flint, S.; Waldron, M.C.

2010-01-01

This study evaluates the efficacy of remote sensing technology to monitor species composition, areal extent and density of aquatic plants (macrophytes and filamentous algae) in impoundments where their presence may violate water-quality standards. Multispectral satellite (IKONOS) images and more than 500 in situ hyperspectral samples were acquired to map aquatic plant distributions. By analyzing field measurements, we created a library of hyperspectral signatures for a variety of aquatic plant species, associations and densities. We also used three vegetation indices. Normalized Difference Vegetation Index (NDVI), near-infrared (NIR)-Green Angle Index (NGAI) and normalized water absorption depth (DH), at wavelengths 554, 680, 820 and 977 nm to differentiate among aquatic plant species composition, areal density and thickness in cases where hyperspectral analysis yielded potentially ambiguous interpretations. We compared the NDVI derived from IKONOS imagery with the in situ, hyperspectral-derived NDVI. The IKONOS-based images were also compared to data obtained through routine visual observations. Our results confirmed that aquatic species composition alters spectral signatures and affects the accuracy of remote sensing of aquatic plant density. The results also demonstrated that the NGAI has apparent advantages in estimating density over the NDVI and the DH. In the feature space of the three indices, 3D scatter plot analysis revealed that hyperspectral data can differentiate several aquatic plant associations. High-resolution multispectral imagery provided useful information to distinguish among biophysical aquatic plant characteristics. Classification analysis indicated that using satellite imagery to assess Lemna coverage yielded an overall agreement of 79% with visual observations and >90% agreement for the densest aquatic plant coverages. Interpretation of biophysical parameters derived from high-resolution satellite or airborne imagery should prove to be a valuable approach for assessing the effectiveness of management practices for controlling aquatic plant growth in inland waters, as well as for routine monitoring of aquatic plants in lakes and suitable lentic environments. ?? 2010 Blackwell Publishing Ltd.

Shifts in malaria vector species composition and transmission dynamics along the Kenyan coast over the past 20 years.

PubMed

Mwangangi, Joseph M; Mbogo, Charles M; Orindi, Benedict O; Muturi, Ephantus J; Midega, Janet T; Nzovu, Joseph; Gatakaa, Hellen; Githure, John; Borgemeister, Christian; Keating, Joseph; Beier, John C

2013-01-08

Over the past 20 years, numerous studies have investigated the ecology and behaviour of malaria vectors and Plasmodium falciparum malaria transmission on the coast of Kenya. Substantial progress has been made to control vector populations and reduce high malaria prevalence and severe disease. The goal of this paper was to examine trends over the past 20 years in Anopheles species composition, density, blood-feeding behaviour, and P. falciparum sporozoite transmission along the coast of Kenya. Using data collected from 1990 to 2010, vector density, species composition, blood-feeding patterns, and malaria transmission intensity was examined along the Kenyan coast. Mosquitoes were identified to species, based on morphological characteristics and DNA extracted from Anopheles gambiae for amplification. Using negative binomial generalized estimating equations, mosquito abundance over the period were modelled while adjusting for season. A multiple logistic regression model was used to analyse the sporozoite rates. Results show that in some areas along the Kenyan coast, Anopheles arabiensis and Anopheles merus have replaced An. gambiae sensu stricto (s.s.) and Anopheles funestus as the major mosquito species. Further, there has been a shift from human to animal feeding for both An. gambiae sensu lato (s.l.) (99% to 16%) and An. funestus (100% to 3%), and P. falciparum sporozoite rates have significantly declined over the last 20 years, with the lowest sporozoite rates being observed in 2007 (0.19%) and 2008 (0.34%). There has been, on average, a significant reduction in the abundance of An. gambiae s.l. over the years (IRR = 0.94, 95% CI 0.90-0.98), with the density standing at low levels of an average 0.006 mosquitoes/house in the year 2010. Reductions in the densities of the major malaria vectors and a shift from human to animal feeding have contributed to the decreased burden of malaria along the Kenyan coast. Vector species composition remains heterogeneous but in many areas An. arabiensis has replaced An. gambiae as the major malaria vector. This has important implications for malaria epidemiology and control given that this vector predominately rests and feeds on humans outdoors. Strategies for vector control need to continue focusing on tools for protecting residents inside houses but additionally employ outdoor control tools because these are essential for further reducing the levels of malaria transmission.

[Species composition, diversity and density of small fishes in two different habitats in Niushan Lake].

PubMed

Ye, Shao-Wen; Li, Zhong-Jie; Cao, Wen-Xuan

2007-07-01

This paper studied the spatial distribution of small fishes in a shallow macrophytic lake, Niushan Lake in spring 2003, and its relations with habitat heterogeneity. Based on the macrophyte cover condition, distance from lake shore and water depth, two representative habitat types in the lake were selected. Habitat A was near the shore with dense submersed macrophyte, while habitat B was far from the shore with sparse submersed macrophyte. Small fishes were sampled quantitatively by block net (180 m2), and their densities within the net area were estimated by multiple mark-recapture or Zippin's removal method. The results showed that there were some differences in species composition, biodiversity measurement, and estimated density of small fishes between the two habitats: 1) the catches in habitat A consisted of 14 small fish species from 5 families, among which, benthopelagic species Rhodeus ocellatus, Paracheilognathus imberbis and Pseudorasbora parva were considered as dominant species, while those in habitat B consisted of 9 small fish species from 3 families, among which, bottom species Rhinogobius giurinus and Micropercops swinhonis were dominant; 2) the Bray-Curtis index between the two small fish communities was 0.222, reflecting their low structure similarity, and no significant difference was observed between their rank/ abundance distributions, both of which belonged to log series distribution; 3) the total density of 9 major species in habitat A was 8.71 ind x m(-2), while that of 5 major species in habitat B was only 3.54 ind x m(-2). The fact that the spatial distribution of the small fishes differed with habitats might be related to their habitat need for escaping predators, feeding, and breeding, and thus, aquatic macrophyte habitat should be of significance in the rational exploitation of small fish resources as well as the conservation of fish resource diversity.

Numerical study of the influence of surface reaction probabilities on reactive species in an rf atmospheric pressure plasma containing humidity

NASA Astrophysics Data System (ADS)

Schröter, Sandra; Gibson, Andrew R.; Kushner, Mark J.; Gans, Timo; O'Connell, Deborah

2018-01-01

The quantification and control of reactive species (RS) in atmospheric pressure plasmas (APPs) is of great interest for their technological applications, in particular in biomedicine. Of key importance in simulating the densities of these species are fundamental data on their production and destruction. In particular, data concerning particle-surface reaction probabilities in APPs are scarce, with most of these probabilities measured in low-pressure systems. In this work, the role of surface reaction probabilities, γ, of reactive neutral species (H, O and OH) on neutral particle densities in a He-H2O radio-frequency micro APP jet (COST-μ APPJ) are investigated using a global model. It is found that the choice of γ, particularly for low-mass species having large diffusivities, such as H, can change computed species densities significantly. The importance of γ even at elevated pressures offers potential for tailoring the RS composition of atmospheric pressure microplasmas by choosing different wall materials or plasma geometries.

Patch size and landscape effects on density and nesting success of grassland birds

USGS Publications Warehouse

Winter, Maiken; Johnson, Douglas H.; Shaffer, Jill A.; Donovan, Therese M.; Svedarsky, W. Daniel

2006-01-01

Current management recommendations for grassland birds in North America emphasize providing large patches of grassland habitat within landscapes that have few forest or shrubland areas. These Bird Conservation Areas are being proposed under the assumption that large patches of habitat in treeless landscapes will maintain viable populations of grassland birds. This assumption requires that patch size and landscape features affect density and nesting success of grassland birds, and that these effects are consistent among years and regions and across focal species. However, these assumptions have not yet been validated for grassland birds, and the relative importance of local vegetation structure, patch size, and landscape composition on grassland bird populations is not well known. In addition, factors influencing grassland bird nesting success have been investigated mostly in small-scale and short-duration studies. To develop management guidelines for grassland birds, we tested the spatial and temporal repeatability of the influence of patch size and landscape composition on density and nesting success of 3 grassland passerines, after controlling for local-scale vegetation structure, climate, and—when analyzing nest success—bird density. We conducted our study during 4 years (1998–2001) in 44 study plots that were set up in 3 regions of the northern tallgrass prairie in Minnesota and North Dakota, USA. In these study plots we measured density and nesting success of clay-colored sparrows (Spizella pallida), Savannah sparrows (Passerculus sandwichensis), and bobolinks (Dolichonyx oryzivorus). Statistical models indicated that density was influenced by patch size, landscape, region, and local vegetation structure more so than by local vegetation structure alone. Both magnitude and direction of the response of density to patch size varied among regions, years, and species. In contrast, the direction of landscape effects was consistent among regions, years, and between Savannah sparrows and bobolinks. In each species, this landscape effect was independent of patch size. Nesting success was not clearly influenced by patch size or landscape composition, and none of the factors that influenced avian density also influenced nesting success in any of the 3 species. General statements on “optimal habitat” for grassland birds should therefore be viewed cautiously. Instead, long-term studies in different regions as well as a deeper understanding of the local system are needed to determine which factors are most important for grassland birds in a particular area.

Comparison of habitat quality and diet of Colobus vellerosus in forest fragments in Ghana.

PubMed

Wong, Sarah N P; Saj, Tania L; Sicotte, Pascale

2006-10-01

The forest fragments surrounding the Boabeng-Fiema Monkey Sanctuary (BFMS) in central Ghana shelter small populations of Colobus vellerosus. Little is known about these populations or the ability of the fragments to support them, despite the fact that these fragments represent potentially important habitat for the colobus in this region. We compared the diet of three groups of C. vellerosus in the fragments to two groups in BFMS. We also examined the differences in plant species composition and food abundance among fragments. The study took place from June to November 2003. Dietary data were collected using scan sampling. Plant species composition and food abundance were evaluated using tree plots and large tree surveys. As in BFMS groups, leaves constituted the highest proportion of the diet of fragment groups, yet the colobus in fragments fed on more lianas than did those in BFMS. Over 50% of all species observed eaten by colobus in the fragments were not consumed in BFMS groups during the same season. Food abundance was similar between fragments and BFMS, although species composition differed. There was no relationship between the density of colobus and the density of food trees or percentage of food species, suggesting that other factors may be influencing the number of colobus present. This study highlights the broad dietary range of C. vellerosus, which may be a factor allowing its survival in these fragments.

Branch xylem density variations across the Amazon Basin

NASA Astrophysics Data System (ADS)

Patiño, S.; Lloyd, J.; Paiva, R.; Baker, T. R.; Quesada, C. A.; Mercado, L. M.; Schmerler, J.; Schwarz, M.; Santos, A. J. B.; Aguilar, A.; Czimczik, C. I.; Gallo, J.; Horna, V.; Hoyos, E. J.; Jimenez, E. M.; Palomino, W.; Peacock, J.; Peña-Cruz, A.; Sarmiento, C.; Sota, A.; Turriago, J. D.; Villanueva, B.; Vitzthum, P.; Alvarez, E.; Arroyo, L.; Baraloto, C.; Bonal, D.; Chave, J.; Costa, A. C. L.; Herrera, R.; Higuchi, N.; Killeen, T.; Leal, E.; Luizão, F.; Meir, P.; Monteagudo, A.; Neil, D.; Núñez-Vargas, P.; Peñuela, M. C.; Pitman, N.; Priante Filho, N.; Prieto, A.; Panfil, S. N.; Rudas, A.; Salomão, R.; Silva, N.; Silveira, M.; Soares Dealmeida, S.; Torres-Lezama, A.; Vásquez-Martínez, R.; Vieira, I.; Malhi, Y.; Phillips, O. L.

2009-04-01

Xylem density is a physical property of wood that varies between individuals, species and environments. It reflects the physiological strategies of trees that lead to growth, survival and reproduction. Measurements of branch xylem density, ρx, were made for 1653 trees representing 598 species, sampled from 87 sites across the Amazon basin. Measured values ranged from 218 kg m-3 for a Cordia sagotii (Boraginaceae) from Mountagne de Tortue, French Guiana to 1130 kg m-3 for an Aiouea sp. (Lauraceae) from Caxiuana, Central Pará, Brazil. Analysis of variance showed significant differences in average ρx across regions and sampled plots as well as significant differences between families, genera and species. A partitioning of the total variance in the dataset showed that species identity (family, genera and species) accounted for 33% with environment (geographic location and plot) accounting for an additional 26%; the remaining "residual" variance accounted for 41% of the total variance. Variations in plot means, were, however, not only accountable by differences in species composition because xylem density of the most widely distributed species in our dataset varied systematically from plot to plot. Thus, as well as having a genetic component, branch xylem density is a plastic trait that, for any given species, varies according to where the tree is growing in a predictable manner. Within the analysed taxa, exceptions to this general rule seem to be pioneer species belonging for example to the Urticaceae whose branch xylem density is more constrained than most species sampled in this study. These patterns of variation of branch xylem density across Amazonia suggest a large functional diversity amongst Amazonian trees which is not well understood.

Comparative analysis of distribution and abundance of West Nile and Eastern Equine Encephalomyelitis virus vectors in Suffolk County, New York, using human population density and land use/cover data

USGS Publications Warehouse

Rochlin, I.; Harding, K.; Ginsberg, H.S.; Campbell, S.R.

2008-01-01

Five years of CDC light trap data from Suffolk County, NY, were analyzed to compare the applicability of human population density (HPD) and land use/cover (LUC) classification systems to describe mosquito abundance and to determine whether certain mosquito species of medical importance tend to be more common in urban (defined by HPD) or residential (defined by LUC) areas. Eleven study sites were categorized as urban or rural using U.S. Census Bureau data and by LUC types using geographic information systems (GISs). Abundance and percent composition of nine mosquito taxa, all known or potential vectors of arboviruses, were analyzed to determine spatial patterns. By HPD definitions, three mosquito species, Aedes canadensis (Theobald), Coquillettidia perturbans (Walker), and Culiseta melanura (Coquillett), differed significantly between habitat types, with higher abundance and percent composition in rural areas. Abundance and percent composition of these three species also increased with freshwater wetland, natural vegetation areas, or a combination when using LUC definitions. Additionally, two species, Ae. canadensis and Cs. melanura, were negatively affected by increased residential area. One species, Aedes vexans (Meigen), had higher percent composition in urban areas. Two medically important taxa, Culex spp. and Aedes triseriatus (Say), were proportionally more prevalent in residential areas by LUC classification, as was Aedes trivittatus (Coquillett). Although HPD classification was readily available and had some predictive value, LUC classification resulted in higher spatial resolution and better ability to develop location specific predictive models.

Canopy gaps decrease microbial densities and disease risk for a shade-intolerant tree species

Treesearch

Kurt O. Reinhart; Alejandro A. Royo; Stacie A. Kageyama; Keith. Clay

2010-01-01

Canopy disturbances such as windthrowevents have obvious impacts on forest structure and composition aboveground, but changes in soil microbial communities and the consequences of these changes are less understood.We characterized the densities of a soil-borne pathogenic oomycete (Pythium) and a common saprotrophic zygomycete (Mortierella...

Changes in Seagrass Species Composition in Northwestern Gulf of Mexico Estuaries: Effects on Associated Seagrass Fauna

PubMed Central

Ray, Brandon R.; Johnson, Matthew W.; Cammarata, Kirk; Smee, Delbert L.

2014-01-01

The objective of this study was to measure the communities associated with different seagrass species to predict how shifts in seagrass species composition may affect associated fauna. In the northwestern Gulf of Mexico, coverage of the historically dominant shoal grass (Halodule wrightii) is decreasing, while coverage of manatee grass (Syringodium filiforme) and turtle grass (Thalassia testudinum) is increasing. We conducted a survey of fishes, crabs, and shrimp in monospecific beds of shoal, manatee, and turtle grass habitats of South Texas, USA to assess how changes in sea grass species composition would affect associated fauna. We measured seagrass parameters including shoot density, above ground biomass, epiphyte type, and epiphyte abundance to investigate relationships between faunal abundance and these seagrass parameters. We observed significant differences in communities among three seagrass species, even though these organisms are highly motile and could easily travel among the different seagrasses. Results showed species specific relationships among several different characteristics of the seagrass community and individual species abundance. More work is needed to discern the drivers of the complex relationships between individual seagrass species and their associated fauna. PMID:25229897

Recreational trails as a source of negative impacts on the persistence of keystone species and facilitation.

PubMed

Ballantyne, Mark; Pickering, Catherine Marina

2015-08-15

Hiking trails, which are among the most common forms of infrastructure created for nature-based tourism, can alter key ecological processes. Trails can damage plants that facilitate the establishment and growth of other species leading to changes in community and functional composition. This can be a particular concern in harsh alpine ecosystems where plant communities are often dominated by one or two keystone species that provide shelter to a suite of beneficiary species. We analysed how a hiking trail affects interspecific facilitation by a dominant trampling-sensitive nurse shrub in the highest National Park in Australia. First we assessed the effects of the trail on the abundance, size and density of the nurse shrub at different distances from the trail. We then compared species richness and composition between areas in, and out, of the nurse shrub's canopy at different distances from the trail. To better understand why some species may benefit from facilitation and any effects of the trail on the quality of facilitation we compared functional composition between quadrats using community trait weighted means calculated by combining plant composition with species functional traits (canopy height, leaf area, % dry weight of leaves and specific leaf area). The abundance, size and density of nurse shrubs was lower on the trail edges than further away, particularly on the leeward edge, where there was more bare ground and less shrub cover. There were differences in species richness, cover, composition and functional composition in and outside the nurse shrub canopy. The shrubs appeared to facilitate species with more competitive, but less stress tolerant traits (e.g. taller plants with leaves that were larger, had high specific leaf area and low dry matter content). However, despite reductions in nurse shrubs near the trail, where they do exist, they appear to provide the same 'quality' of facilitation as nurse shrubs further away. However, longer-term effects may be occurring as the loss of nurse shrubs alters the wind profile of the ridgeline and therefore succession. The use of a steel mesh walkway along the trail may facilitate the regeneration of nurse shrubs and other plants that require protection from wind. Our results highlight the importance of diversifying recreation ecology research to assess how trails affect important ecological processes. Copyright © 2015 Elsevier Ltd. All rights reserved.

Persistence of Coffea arabica and its relationship with the structure, species diversity and composition of a secondary forest in Brazil

PubMed Central

Prado-Junior, Jamir; de Oliveira-Neto, Norberto Emídio; Santana, Lucas Dezidério; do Vale, Vagner Santiago; Jacobson, Tamiel Baiocchi; de Oliveira, Paulo Eugênio Alves Macedo; Carvalho, Fabrício Alvim

2018-01-01

Understanding the relationships between Coffea arabica L. and the native tree community of secondary forests regrowing after the abandonment of coffee plantations is important because, as a non-native species in the Neotropics, coffee can outcompete native species, reducing diversity and forests ecosystem services. We aimed to answer three questions: 1) Does coffee regeneration in secondary forests differ between shaded and unshaded abandoned plantations?; 2) How is coffee basal area related to structural attributes, species diversity and composition of the native community?; and 3) Do the relationships between coffee and native community differ between tree and sapling components? We sampled the tree and sapling components in a seasonal tropical dry forest that were previously used as shaded and unshaded coffee plantations. Coffee was the most important species in the sapling component of shaded systems, but was almost absent in unshaded ones. Coffee basal area was negatively related with the native density and absolute species richness of the sapling component; and was negatively related with tree density, and positively related with the percentage of pioneer individuals of the native tree component. Our results indicate that coffee persists in secondary forest communities even after more than 70 years of shaded-coffee plantations were abandoned, potentially reducing density and diversity of native species. Despite limitations, which hinder more general conclusions on coffee invasiveness in Brazilian secondary tropical forests, our results indicate that coffee is a strong competitor in the studied secondary forests and provide important insights for future research on this topic. PMID:29538468

Rumen ciliate protozoal fauna of native sheep, friesian cattle and dromedary camel in Libya.

PubMed

Selim, H M; Imai, S; el Sheik, A K; Attia, H; Okamoto, E; Miyagawa, E; Maede, Y

1999-03-01

Rumen ciliate species and composition were surveyed on the native sheep, Friesian-cattle and dromedary (one-humped) camels kept in Libya. As a result of survey, 5 genera including 14 species with 5 formae in native sheep, 9 genera including 27 species with 6 formae in Friesian-cattle and 6 genera including 13 species and 7 formae in dromedary camels were identified. All of the ciliate species and their percentage composition detected from the Libyan sheep and cattle in this examination were similar to those found from corresponding animals in the other countries. Libyan camels lacked some peculiar ciliate species found from camels in the other countries, but had many cosmopolitan species common with those in the domestic ruminants, suggesting that ciliate faunae of camel are easily affected by the other domestic ruminants kept together. The ciliate density was estimated as 105/ml in every host species.

Influence of overstory on snow depth and density in hemlock-spruce stands: implications for management of deer habitat in Southeastern Alaska.

Treesearch

Thomas A. Hanley; Cathy L. Rose

1987-01-01

Snow depth and density were measured in 33 stands of western hemlock-Sitka spruce (Tsuga heterophylla [Rat] Sarg.-Picea sitchensis [Bong.] Carr.) over a 3-year period. The stands, near Juneau, Alaska, provided broad ranges of species composition, age, over-story canopy coverage, tree density, and wood volume. Stepwise multiple regression analyses indicated that both...

Growth response of managed uneven-aged northern conifer stands

Treesearch

Dale S. Solomon; Robert M. Frank

1983-01-01

The growth response of trees in spruce-fir-hemlock stands was recorded from plots that were managed to control stand density, species composition, length of harvest interval, and salvage of mortality. Basal area, volume, and diameter increment are presented by species and size classification for harvesting intervals of 5, 10, and 20 years.

An ultracentrifugation analysis of two hundred fish genomes.

PubMed

Bucciarelli, Giuseppe; Bernardi, Giacomo; Bernardi, Giorgio

2002-08-07

The goal of this study was to provide a comprehensive view of the compositional characteristics of fish genomes. We therefore expanded the number of fish species that we had explored so far in their DNAs by analytical ultracentrifugation in CsCl density gradient from 122 to 201. This study included representatives from three out of nine orders of Elasmobranchs (sharks and rays), both orders of dipnoan lungfishes, and both orders of chondrosteans (sturgeons and bichirs). We also studied 19 out of 38 teleostean orders, which represent all but four (minor) superorders of the subdivision Teleostei, a group comprising about 23,600 species (96% of all extant fishes). This leaves for further studies two subclasses, Holocephali (chimaeras), and Coelacanthimorpha (gombessas). In spite of this substantial increase in the number of species and orders analysed, all average properties (the modal buoyant density, rho(0), the average buoyant density, , the CsCl profile asymmetry, A, and the compositional heterogeneity, H), and all their ranges were unchanged compared to a previous study [J. Mol. Evol. 31 (1990) 265]. This suggests that, in all likelihood, the properties reported in the present paper can be considered as generally valid for all fish genomes.

Ion composition variety and variability around perihelion

NASA Astrophysics Data System (ADS)

Beth, Arnaud; Altwegg, Kathrin; Behar, Étienne; Broiles, Tom; Burch, Jim; Carr, Christopher; Eriksson, Anders; Galand, Marina; Goetz, Charlotte; Henri, Pierre; Heritier, Kévin; Nilsson, Hans; Odelstad, Elias; Richter, Ingo; Rubin, Martin; Vallieres, Xavier

2017-04-01

For two years, the Double Focusing Mass Spectrometer (DFMS), one of the Rosetta Orbiter Spectrometer for Ion and Neutral Analysis (ROSINA) onboard Rosetta probed the neutral gas and the plasma composition of the comet 67P/Churyumov-Gerasimenko's coma (67P). Major ion species detected include water ions (e.g, H2O+, H3O+, HO+) observed throughout the escorting phase. The analysis of DFMS data revealed a large zoo of ion species near perihelion (summer 2015). In particular, protonated versions of high proton affinity neutrals (e.g., NH4+) were detected, but also hydrocarbon and organic ion species. Near perihelion, ion composition was also highly variable and showed interesting variations in the complexity of the observed ion species. We will first present an overview of the rich variety of ion species observed during perihelion. This study will be supported by ionospheric modeling of ion composition below the ion exobase. We will then show an intercomparison between DFMS data and Rosetta Plasma Consortium (RPC) plasma and particle data to interpret the DFMS ion composition variability. Our primary goal is to highlight any correlation between observations from these different instruments (i.e. ion composition, ion and electron number density, energy distribution, magnetic field) and to find relevant signatures of physical processes which can affect the chemistry and dynamics (e.g., acceleration and deflection) of the involved neutral and ion species.

Factors associated with long-term species composition in dry tropical forests of Central India

NASA Astrophysics Data System (ADS)

Agarwala, M.; DeFries, R. S.; Qureshi, Q.; Jhala, Y. V.

2016-10-01

The long-term future of species composition in forests depends on regeneration. Many factors can affect regeneration, including human use, environmental conditions, and species’ traits. This study examines the influence of these factors in a tropical deciduous forest of Central India, which is heavily used by local, forest-dependent residents for livestock grazing, fuel-wood extraction, construction and other livelihood needs. We measure size-class proportions (the ratio of abundance of a species at a site in a higher size class to total abundance in both lower and higher size classes) for 39 tree species across 20 transects at different intensities of human use. The size-class proportions for medium to large trees and for small to medium-sized trees were negatively associated with species that are used for local construction, while size class proportions for saplings to small trees were positively associated with those species that are fire resistant and negatively associated with livestock density. Results indicate that grazing and fire prevent non-fire resistant species from reaching reproductive age, which can alter the long term composition and future availability of species that are important for local use and ecosystem services. Management efforts to reduce fire and forest grazing could reverse these impacts on long-term forest composition.

Using conservation value to assess land restoration and management alternatives across a degraded oak savanna landscape

USGS Publications Warehouse

Grundel, R.; Pavlovic, N.B.

2008-01-01

1. Managers considering restoration of landscapes often face a fundamental challenge - what should be the habitat composition of the restored landscape? We present a method for evaluating an important conservation trade-off inherent in making that decision. 2. Oak savannas and grasslands were historically widespread across central North America but are now rare. Today, in north-west Indiana, USA, habitats spanning a range of woody vegetation density, from nearly treeless open habitats to forests, occur across the conserved landscape where savannas probably once dominated. To understand the benefits of different potential landscape compositions, we evaluated how different proportions of five habitats - open, savanna, woodland, scrub and forest - might affect the conservation value of the north-west Indiana landscape for birds. Two variables of potential conservation importance were examined: species diversity, a measure of avian community richness, and conservation index, the percentage of a bird species' global population occurring on a hectare of landscape, summed across all bird species present. Higher values of conservation index were associated with higher local densities of globally more rare and more threatened species. 3. Conservation index and species diversity were correlated negatively across hypothetical landscapes composed of different proportions of the five habitats. Therefore, a management trade-off existed between conservation index and species diversity because landscapes that maximized species diversity differed from landscapes that maximized conservation index. 4. A landscape of 50% open, 22% savanna, 15% scrub and 13% forest was predicted to represent a compromise at which conservation index and species diversity reached the same percentage of their maxima. In contrast, the current landscape is dominated by forest. 5. Synthesis and applications. We quantified the trade-off between two potential aspects of a landscape's conservation value for birds - the landscape's ability to promote avian species diversity and the landscape's use by threatened avian species. This quantification allowed us to evaluate the ability of different landscape compositions to achieve preferable trade-off compromises, such as maximizing diversity for a given level of landscape use by threatened species. Managers can use these trade-off results to determine which landscape compositions are associated with particular conservation and management priorities.

[Soil mesofauna in differents systems of land use soil in Upper River Solimões, AM, Brazil].

PubMed

Morais, José W De; Oliveira, Viviane Dos S; Dambros, Cristian De S; Tapia-Coral, Sandra C; Acioli, Agno N S

2010-01-01

The mesofauna has an important function in the soil and it is represented mainly by Acari Oribatida and Collembola. We report the first data on the density and diversity of the soil mesofauna in Benjamin Constant, Amazonas State, Brazil. The following systems were evaluated: primary forest, secondary forest, agroforestry system, cultivated areas and pastures. A total of 101 samples were collected 100 m apart from each other and specimens were collected by using Berlese-Tullgren method. The highest density was registered in secondary forest (29,776 specimens.m-2). Acari Oribatida was the dominant group (7.072 specimens.m-2) in the pasture, suggesting that mites show higher capacity of adaptation to disturbed environments and/or due to the presence of gregarious species. The density of Collembola (5,632 specimens.m-2) was higher in secondary forest. Formicidae was the dominant group (27,824 specimens.m-2) and its highest density occurred in the secondary forest (12,336 specimens.m-2). Seven species and ten morphospecies of Isoptera and three species of Symphyla were identified. The highest density and diversity were found in secondary forest. One supposes that the low density of mesofauna found in all of the studied systems is being influenced by soil structure and composition as well as litter volume. For SUT, the composition of taxonomic groups in the cultivated areas is similar to the one found in primary forest, while the groups found in the agroforestry system are similar to those in the pasture, which may help to decide on land use strategies.

Evaluation of forest structure, biomass and carbon sequestration in subtropical pristine forests of SW China.

PubMed

Nizami, Syed Moazzam; Yiping, Zhang; Zheng, Zheng; Zhiyun, Lu; Guoping, Yang; Liqing, Sha

2017-03-01

Very old natural forests comprising the species of Fagaceae (Lithocarpus xylocarpus, Castanopsis wattii, Lithocarpus hancei) have been prevailing since years in the Ailaoshan Mountain Nature Reserve (AMNR) SW China. Within these forest trees, density is quite variable. We studied the forest structure, stand dynamics and carbon density at two different sites to know the main factors which drives carbon sequestration process in old forests by considering the following questions: How much is the carbon density in these forest trees of different DBH (diameter at breast height)? How much carbon potential possessed by dominant species of these forests? How vegetation carbon is distributed in these forests? Which species shows high carbon sequestration? What are the physiochemical properties of soil in these forests? Five-year (2005-2010) tree growth data from permanently established plots in the AMNR was analysed for species composition, density, stem diameter (DBH), height and carbon (C) density both in aboveground and belowground vegetation biomass. Our study indicated that among two comparative sites, overall 54 species of 16 different families were present. The stem density, height, C density and soil properties varied significantly with time among the sites showing uneven distribution across the forests. Among the dominant species, L. xylocarpus represents 30% of the total carbon on site 1 while C. wattii represents 50% of the total carbon on site 2. The average C density ranged from 176.35 to 243.97 t C ha -1 . The study emphasized that there is generous degree to expand the carbon stocking in this AMNR through scientific management gearing towards conservation of old trees and planting of potentially high carbon sequestering species on good site quality areas.

Electron precipitation control of the Mars nightside ionosphere

NASA Astrophysics Data System (ADS)

Lillis, R. J.; Girazian, Z.; Mitchell, D. L.; Adams, D.; Xu, S.; Benna, M.; Elrod, M. K.; Larson, D. E.; McFadden, J. P.; Andersson, L.; Fowler, C. M.

2017-12-01

The nightside ionosphere of Mars is known to be highly variable, with densities varying substantially with ion species, solar zenith angle, solar wind conditions and geographic location. The factors that control its structure include neutral densities, day-night plasma transport, plasma temperatures, dynamo current systems driven by neutral winds, solar energetic particle events, superthermal electron precipitation, chemical reaction rates and the strength, geometry and topology of crustal magnetic fields. The MAVEN mission has been the first to systematically sample the nightside ionosphere by species, showing that shorter-lived species such as CO2+ and O+ are more correlated with electron precipitation flux than longer lived species such as O2+ and NO+, as would be expected, and is shown in the figure below from Girazian et al. [2017, under review at Geophysical Research Letters]. In this study we use electron pitch-angle and energy spectra from the Solar Wind Electron Analyzer (SWEA) and Solar Energetic Particle (SEP) instruments, ion and neutral densities from the Neutral Gas and Ion Mass Spectrometer (NGIMS), electron densities and temperatures from the Langmuir Probe and Waves (LPW) instrument, as well as electron-neutral ionization cross-sections. We present a comprehensive statistical study of electron precipitation on the Martian nightside and its effect on the vertical, local-time and geographic structure and composition of the ionosphere, over three years of MAVEN observations. We also calculate insitu electron impact ionization rates and compare with ion densities to judge the applicability of photochemical models of the formation and maintenance of the nightside ionosphere. Lastly, we show how this applicability varies with altitude and is affected by ion transport measured by the Suprathermal and thermal Ion Composition (STATIC) instrument.

Encroachment of oriental bittersweet into Pitcher’s thistle habitat

USGS Publications Warehouse

Leicht-Young, Stacey A.; Pavlovic, Noel B.

2012-01-01

Common invasive species and rare endemic species can grow and interact at the ecotone between forested and non-forested dune habitats. To investigate these interactions, a comparison of the proximity and community associates of a sympatric invasive (Celastrus orbiculatus; oriental bittersweet) and native (C. scandens; American bittersweet) liana species to federally threatened Cirsium pitcheri (Pitcher's thistle) in the dunes habitats of Lake Michigan was conducted. Overall, the density of the invasive liana species was significantly greater in proximity to C. pitcheri than the native species. On the basis of composition, the three focal species occurred in both foredune and blowout habitats. The plant communities associated with the three focal species overlapped in ordination space, but there were significant differences in composition. The ability of C. orbiculatus to rapidly grow and change the ecological dynamics of invasion sites adds an additional threat to the successional habitats of C. pitcheri.

Vegetative composition in forested areas following application of desired forest condition treatments

Treesearch

Trent A. Danley; Andrew W. Ezell; Emily B. Schultz; John D. Hodges

2015-01-01

Desired forest conditions, or DFCs, are recently created parameters which strive to create diverse stands of hardwoods of various species and age classes, along with varying densities and canopy gaps, through the use of uneven-aged silvicultural methods and repeated stand entries. Little research has been conducted to examine residual stand composition and hardwood...

Structure, composition and regeneration of riparian forest along an altitudinal gradient in northern Iran

Treesearch

Mohammad Naghi Adel; Hassan Pourbabaei; Ali Salehi; Seyed Jalil Alavi; Daniel C. Dey

2017-01-01

In order to protect and understand the regeneration of riparian forests, it is important to understand the environmental conditions that lead to their vegetation differentiation. We evaluated the structure, composition, density and regeneration of woody species in forests along the river Safaroud in Ramsar forest in northern Iran in relation to elevation, soil...

Soil nitrogen transformations under alternative management strategies in Appalachian forests

Treesearch

T. Adam Coates; Ralph E.J. Boerner; Thomas A. Waldrop; Daniel A. Yaussy

2008-01-01

Once subject to frequent fire and strongly N limited, the forests of the Appalachian Mountain region of eastern North America have experienced almost a century of fire suppression, and changes in tree species composition, understory density and composition, and accumulations of detritus have paralleled the changes in fire frequency. In an effort to restore these...

Habitat Composition and Connectivity Predicts Bat Presence and Activity at Foraging Sites in a Large UK Conurbation

PubMed Central

Hale, James D.; Fairbrass, Alison J.; Matthews, Tom J.; Sadler, Jon P.

2012-01-01

Background Urbanization is characterized by high levels of sealed land-cover, and small, geometrically complex, fragmented land-use patches. The extent and density of urbanized land-use is increasing, with implications for habitat quality, connectivity and city ecology. Little is known about densification thresholds for urban ecosystem function, and the response of mammals, nocturnal and cryptic taxa are poorly studied in this respect. Bats (Chiroptera) are sensitive to changing urban form at a species, guild and community level, so are ideal model organisms for analyses of this nature. Methodology/Principal Findings We surveyed bats around urban ponds in the West Midlands conurbation, United Kingdom (UK). Sites were stratified between five urban land classes, representing a gradient of built land-cover at the 1 km2 scale. Models for bat presence and activity were developed using land-cover and land-use data from multiple radii around each pond. Structural connectivity of tree networks was used as an indicator of the functional connectivity between habitats. All species were sensitive to measures of urban density. Some were also sensitive to landscape composition and structural connectivity at different spatial scales. These results represent new findings for an urban area. The activity of Pipistrellus pipistrellus (Schreber 1774) exhibited a non-linear relationship with the area of built land-cover, being much reduced beyond the threshold of ∼60% built surface. The presence of tree networks appears to mitigate the negative effects of urbanization for this species. Conclusions/Significance Our results suggest that increasing urban density negatively impacts the study species. This has implications for infill development policy, built density targets and the compact city debate. Bats were also sensitive to the composition and structure of the urban form at a range of spatial scales, with implications for land-use planning and management. Protecting and establishing tree networks may improve the resilience of some bat populations to urban densification. PMID:22428015

Habitat composition and connectivity predicts bat presence and activity at foraging sites in a large UK conurbation.

PubMed

Hale, James D; Fairbrass, Alison J; Matthews, Tom J; Sadler, Jon P

2012-01-01

Urbanization is characterized by high levels of sealed land-cover, and small, geometrically complex, fragmented land-use patches. The extent and density of urbanized land-use is increasing, with implications for habitat quality, connectivity and city ecology. Little is known about densification thresholds for urban ecosystem function, and the response of mammals, nocturnal and cryptic taxa are poorly studied in this respect. Bats (Chiroptera) are sensitive to changing urban form at a species, guild and community level, so are ideal model organisms for analyses of this nature. We surveyed bats around urban ponds in the West Midlands conurbation, United Kingdom (UK). Sites were stratified between five urban land classes, representing a gradient of built land-cover at the 1 km(2) scale. Models for bat presence and activity were developed using land-cover and land-use data from multiple radii around each pond. Structural connectivity of tree networks was used as an indicator of the functional connectivity between habitats. All species were sensitive to measures of urban density. Some were also sensitive to landscape composition and structural connectivity at different spatial scales. These results represent new findings for an urban area. The activity of Pipistrellus pipistrellus (Schreber 1774) exhibited a non-linear relationship with the area of built land-cover, being much reduced beyond the threshold of ∼60% built surface. The presence of tree networks appears to mitigate the negative effects of urbanization for this species. Our results suggest that increasing urban density negatively impacts the study species. This has implications for infill development policy, built density targets and the compact city debate. Bats were also sensitive to the composition and structure of the urban form at a range of spatial scales, with implications for land-use planning and management. Protecting and establishing tree networks may improve the resilience of some bat populations to urban densification.

Mapping forest structure and composition from low-density LiDAR for informed forest, fuel, and fire management at Eglin Air Force Base, Florida, USA

Treesearch

Andrew T. Hudak; Benjamin C. Bright; Scott M. Pokswinski; E. Louise Loudermilk; Joseph J. O' Brien; Benjamin S. Hornsby; Carine Klauberg; Carlos A. Silva

2016-01-01

Eglin Air Force Base (AFB) in Florida, in the United States, conserves a large reservoir of native longleaf pine (Pinus palustris Mill.) stands that land managers maintain by using frequent fires. We predicted tree density, basal area, and dominant tree species from 195 forest inventory plots, low-density airborne LiDAR, and Landsat data available across the entirety...

Effects of deer exclosures on oak regeneration in closed-canopy stands

Treesearch

Angela M. Yuska; Kim C. Steiner; James C. Finley

2008-01-01

Studies of the effects of high deer densities on forest regeneration have shown altered species composition and reduced diversity in stands regenerating after harvest. The effects of browsing in fully stocked, undisturbed stands are less well known but important, as establishment of seedlings of oaks and other species prior to disturbance is very important for self-...

Natural regeneration of interior douglas-fir in the northern Rocky Mountains

Treesearch

Dennis E. Ferguson; Clinton E. Carlson

1991-01-01

The regeneration period is a crucial time in the life of a stand because it determines species composition and tree density for the new stand. Silviculturists prescribe treatments to favor adequate and timely conifer regeneration of economically important species that grow well. This paper presents research results that will help silviculturists identify factors...

The Association of a Longidorus Species with Stunting and Root Damage of Loblolly Pine (Pinus taeda L.) Seedlings

Treesearch

Stephen W. Fraedrich; Michelle M. Cram

2002-01-01

A Longidorus species was consistently associated with patches of stunted and chlorotic loblolly pine seedlings at a forest-tree nursery in Georgia. Seedlings from affected areas had poorly developed root systems that lacked lateral and feeder roots. Longidorus population densities in composite soil samples from the margins of...

Dissociative recombination in planetary ionospheres

NASA Technical Reports Server (NTRS)

Fox, J. L.

1993-01-01

Ionization in planetary atmospheres can be produced by solar photoionization, photoelectron impact ionization, and, in auroral regions, by impact of precipitating particles. This ionization is lost mainly in dissociative recombination (DR) of molecular ions. Although atomic ions cannot undergo DR, they can be transformed locally through ion-molecule reactions into molecular ions, or they may be transported vertically or horizontally to regions of the atmosphere where such transformations are possible. Because DR reactions tend to be very exothermic, they can be an important source of kinetically or internally excited fragments. In interplanetary thermospheres, the neutral densities decrease exponentially with altitude. Below the homopause (or turbopause), the atmosphere is assumed to be throughly mixed by convection and/or turbulence. Above the homopause, diffusion is the major transport mechanism, and each species is distributed according to its mass, with the logarithmic derivative of the density with repect to altitude given approximately by -1/H, where H = kT/mg is the scale height. In this expression, T is the neutral temperature, g is the local acceleratiion of gravity, and m is the mass of the species. Thus lighter species become relatively more abundant, and heavier species less abundant, as the altitude increases. This variation of the neutral composition can lead to changes in the ion composition; furthermore, as the neutral densities decrease, dissociative recombination becomes more important relative to ion-neutral reactions as a loss mechanism for molecular ions.

Designing mixed species tree plantations for the tropics: balancing ecological attributes of species with landholder preferences in the Philippines.

PubMed

Nguyen, Huong; Lamb, David; Herbohn, John; Firn, Jennifer

2014-01-01

A mixed species reforestation program known as the Rainforestation Farming system was undertaken in the Philippines to develop forms of farm forestry more suitable for smallholders than the simple monocultural plantations commonly used then. In this study, we describe the subsequent changes in stand structure and floristic composition of these plantations in order to learn from the experience and develop improved prescriptions for reforestation systems likely to be attractive to smallholders. We investigated stands aged from 6 to 11 years old on three successive occasions over a 6 year period. We found the number of species originally present in the plots as trees >5 cm dbh decreased from an initial total of 76 species to 65 species at the end of study period. But, at the same time, some new species reached the size class threshold and were recruited into the canopy layer. There was a substantial decline in tree density from an estimated stocking of about 5000 trees per ha at the time of planting to 1380 trees per ha at the time of the first measurement; the density declined by a further 4.9% per year. Changes in composition and stand structure were indicated by a marked shift in the Importance Value Index of species. Over six years, shade-intolerant species became less important and the native shade-tolerant species (often Dipterocarps) increased in importance. Based on how the Rainforestation Farming plantations developed in these early years, we suggest that mixed-species plantations elsewhere in the humid tropics should be around 1000 trees per ha or less, that the proportion of fast growing (and hence early maturing) trees should be about 30-40% of this initial density and that any fruit tree component should only be planted on the plantation margin where more light and space are available for crowns to develop.

Designing Mixed Species Tree Plantations for the Tropics: Balancing Ecological Attributes of Species with Landholder Preferences in the Philippines

PubMed Central

Nguyen, Huong; Lamb, David; Herbohn, John; Firn, Jennifer

2014-01-01

A mixed species reforestation program known as the Rainforestation Farming system was undertaken in the Philippines to develop forms of farm forestry more suitable for smallholders than the simple monocultural plantations commonly used then. In this study, we describe the subsequent changes in stand structure and floristic composition of these plantations in order to learn from the experience and develop improved prescriptions for reforestation systems likely to be attractive to smallholders. We investigated stands aged from 6 to 11 years old on three successive occasions over a 6 year period. We found the number of species originally present in the plots as trees >5 cm dbh decreased from an initial total of 76 species to 65 species at the end of study period. But, at the same time, some new species reached the size class threshold and were recruited into the canopy layer. There was a substantial decline in tree density from an estimated stocking of about 5000 trees per ha at the time of planting to 1380 trees per ha at the time of the first measurement; the density declined by a further 4.9% per year. Changes in composition and stand structure were indicated by a marked shift in the Importance Value Index of species. Over six years, shade-intolerant species became less important and the native shade-tolerant species (often Dipterocarps) increased in importance. Based on how the Rainforestation Farming plantations developed in these early years, we suggest that mixed-species plantations elsewhere in the humid tropics should be around 1000 trees per ha or less, that the proportion of fast growing (and hence early maturing) trees should be about 30–40% of this initial density and that any fruit tree component should only be planted on the plantation margin where more light and space are available for crowns to develop. PMID:24751720

Utilization of individual lecithins in intestinal lipoprotein formation in the rat.

PubMed Central

Patton, G M; Clark, S B; Fasulo, J M; Robins, S J

1984-01-01

To determine the molecular species composition of lecithins of different nascent lipoproteins, high density lipoproteins (HDL), very low density lipoproteins (VLDL), and chylomicrons (CM) were isolated from the mesenteric lymph of rats. Lymph was collected at 0 degrees C with 5,5'-dithiobis-2-dinitrobenzoic acid added to inhibit lecithin-cholesterol acyl transferase. CM were separated by ultracentrifugation and HDL from VLDL by dextran SO4-MG+2 precipitation. Molecular species of lecithin were directly isolated by reverse phase high performance liquid chromatography. In fasted animals, the lecithin compositions of lymph HDL and VLDL were virtually the same and closely resembled the lecithin composition of intestinal mucosa. When bile lecithin was eliminated (by bile diversion), there was a marked change in lecithin composition of all lipoprotein and mucosal samples, which was most notable for a reduction in 16:0-species (which are predominant in bile) and a relative increase in the corresponding 18:0-species. Feeding unsaturated triglycerides (triolein, trilinolein, or a combination of triolein and trilinolein) also resulted in a change in HDL and VLDL lecithin composition. The effect was similar whether bile lecithin was present or eliminated and was notable for a reduction in 16:0-species, an increase in 18:0-species, and the emergence of large amounts of diunsaturated lecithins that corresponded to the fatty acid composition of the triglycerides fed (i.e., 18:1-18:1, 18:2-18:2, and 18:1-18:2 lecithins). When bile-diverted rats were infused via the duodenum with a mix of [14C]choline-labeled lecithins (isolated from the bile of other rats), the incorporation of infused lecithins into different lymph lipoproteins was distinctly different. Individual lecithins were incorporated to a variable extent into each lipoprotein. In fasted rats the specific activities of all major molecular species of lecithin were relatively greater in VLDL than HDL, indicating that HDL derived proportionately more of its lecithins from an endogenous pool than did VLDL. Feeding triolein changed the specific activities of more of the lecithin species of VLDL than of HDL. The specific activities of lecithins in CM were more similar to VLDL than to HDL after triolein feeding. Results thus indicate that, although the lecithins of different mesenteric lymph lipoproteins are similar and may be derived from membrane sites with the same lecithin composition, lecithins incorporated into different lipoproteins originate from different metabolic pools and/or by different mechanisms. PMID:6690480

Consumptive effects of fish reduce wetland crayfish recruitment and drive species turnover.

PubMed

Kellogg, Christopher M; Dorn, Nathan J

2012-04-01

Predators and dry-disturbances have pronounced effects on invertebrate communities and can deterministically affect compositional turnover between discrete aquatic habitats. We examined the effect of sunfish (Lepomis spp.) predators on two native crayfish, Procambarus alleni and P. fallax, that regionally coexist in an expansive connected wetland in order to test the hypotheses that sunfish predation limits crayfish recruitment (both species) and that it disproportionately affects P. alleni, the species inhabiting temporary wetlands. In replicate vegetated wetlands (18.6 m(2)), we quantified summertime crayfish recruitment and species composition across an experimental gradient of sunfish density. Separately, we quantified effects of sunfish on crayfish growth, conducted a complimentary predation assay in mesocosms, and compared behavior of the two crayfish. Sunfish reduced P. alleni summertime recruitment by >99% over the full sunfish gradient, and most of the effect was caused by low densities of sunfish (0.22-0.43 m(-2)). P. alleni dominated wetlands with few or no sunfish, but the composition shifted towards P. fallax dominance in wetlands with abundant sunfish. P. fallax survived better than P. alleni over 40 h in smaller mesocosms stocked with warmouth. Sunfish reduced P. fallax recruitment 62% in a second wetland experiment, but growth rates of caged crayfish (both species) were unaffected by sunfish presence, suggesting predatory effects were primarily consumptive. Consistent with life histories of relatively fish-sensitive invertebrates, P. alleni engaged in more risky behaviors in the laboratory. Our results indicate that sunfish predators limit recruitment of both species, but disproportionately remove the more active and competitively dominant P. alleni. Spatially and temporally variable dry-disturbances negatively co-varying with sunfish populations allow for regional coexistence of these two crayfish and may release populations of either species from control by predatory fishes.

Spatial distribution and seasonality of ichthyoplankton and anthropogenic debris in a river delta in the Caribbean Sea.

PubMed

Correa-Herrera, T; Barletta, M; Lima, A R A; Jiménez-Segura, L F; Arango-Sánchez, L B

2017-04-01

Temporal changes in larval fish species composition and abundance compared with other components of the seston are described in four estuarine habitats in the Atrato Delta, Colombia. In comparison with zooplankton, fish larvae and egg density and anthropogenic debris abundance were low in the South Atrato Delta. Transparency, water temperature and chlorophyll a were the major factors influencing the spatiotemporal distribution of ichthyoplankton in the delta. The most abundant fish larvae were Astyanax sp. 1, Anchovia clupeoides, Cetengraulis edentulus, Anchoa sp., Bathygbius curacao, Dormitator maculatus, Hyporhamphus sp., Atherinella blackburni, Gobiosoma sp. 1 and Menticirrhus americanus (92·8% of total abundance). Spatial temporal analysis shows that in this delta, shrub (arracachal) and grass (eneal) habitats are important for freshwater and estuarine species, whilst mudflat and mangrove are important for estuarine species and estuarine-marine species, since most flexion and post-flexion stages of these species were found there. Anthropogenic debris density never surpassed the total ichthyoplankton density, but was ubiquitous. Shrub and mangrove habitats had higher densities of anthropogenic debris, since these are flood-stem habitats that trap solids. © 2017 The Fisheries Society of the British Isles.

Canopy gaps decrease microbial densities and disease risk for a shade-intolerant tree species

NASA Astrophysics Data System (ADS)

Reinhart, Kurt O.; Royo, Alejandro A.; Kageyama, Stacie A.; Clay, Keith

2010-11-01

Canopy disturbances such as windthrow events have obvious impacts on forest structure and composition aboveground, but changes in soil microbial communities and the consequences of these changes are less understood. We characterized the densities of a soil-borne pathogenic oomycete ( Pythium) and a common saprotrophic zygomycete ( Mortierella) in nine pairs of forest gaps created by windthrows and adjacent forest understories. We determined the levels of Pythium necessary to cause disease by performing pathogenicity experiments using two Pythium species, a range of Pythium densities, and two common tree species ( Acer rubrum and Prunus serotina) from the study sites. Three years post-disturbance, densities of Mortierella remained suppressed in soil from forest gaps compared to levels in intact forest understories while varying across sites and sampling dates. Pythium were infrequently detected likely because of soil handling effects. Expression of disease symptoms increased with increasing inoculum density for seedlings of P. serotina with each Pythium spp. having a similar effect on this species. Conversely, A. rubrum appeared resistant to the two species of Pythium. These results suggest that Pythium densities at sites where they were detected are sufficient to cause disease and possibly affect establishment of susceptible species like P. serotina. Because early seral environments have lower loads of the saprotrophic Mortierella, pathogen loads may follow a similar pattern, causing susceptible species to establish more frequently in those habitats than in late-seral forests. Forest disturbances that alter the disease landscape may provide an additional mechanism for explaining succession of temperate forests in addition to the shade-tolerance paradigm.

Maximum size-density relationships for mixed softwoods in the northeastern USA

Treesearch

Dale S. Solomon; Lianjun Zhang

2002-01-01

The maximum size-density relationships or self-thinning lines were developed for three mix .ed-softwood climax forest habitats (hemlock-red spruce, spruce-fir, and cedar-black spruce) in the northeastern USA. The plot data were collected from an extensive data base used in growth studies from 1950 to 1970, and represented a wide range of species compositions, sites,...

Individual tree growth response to variable-density thinning in coastal Pacific Northwest forests.

Treesearch

Scott D.s Roberts; Constance A. Harrington

2008-01-01

We examined 5-year basal area growth of nearly 2600 trees in stem-mapped plots at five locations differing in site characteristics, species composition, and management history on the Olympic Peninsula in Western Washington, USA. Our objectives were to determine if internal edges, the boundaries within the stand between components of the variable-density thinning,...

Composition and energy contents of mature inshore spawning capelin (Mallotus villosus): Implications for seabird predators

USGS Publications Warehouse

Montevecchi, W.A.; Piatt, John F.

1984-01-01

1. Lipid levels of capelin are highest in late fall and lowest during the summer spawning season; protein levels are constant at 13–14% body wt throughout the year.2. Ovid females contained significantly more lipid and protein and less water and had higher energy densities than males and spent females.3. Surgically-removed egg masses made up 34.2 ± 10.3% female body wt and were very similar in composition and energy density to gravid females, differing from spent females and males in similar respects. Owing to the ovarian development of females, sexes differ in energy density only during the spawning season.4. Sexes were similar in amino acid composition. Analysis of capelin and three other seabird forage species revealed that isoleucine levels were lower than minimum avian maintenance and growth requirements.5. Implications for the foraging behaviour and food preferences of diving seabird predators (murres, puffins) are discussed

Marine predator surveys in Glacier Bay National Park and Preserve

USGS Publications Warehouse

Bodkin, James L.; Kloecker, Kimberly A.; Coletti, Heather A.; Esslinger, George G.; Monson, Daniel H.; Ballachey, Brenda E.

2002-01-01

Since 1999, vessel based surveys to estimate species composition, distribution and relative abundance of marine birds and mammals have been conducted along coastal and pelagic (offshore) transects in Glacier Bay, Alaska. Surveys have been conducted during winter (November-March) and summer (June). This annual report presents the results of those surveys conducted in March and June of 2001. Following completion of surveys in 2002 we will provide a final report of the results of all surveys conducted between 1999 and 2002.Glacier Bay supports diverse and abundant assemblages of marine birds and mammals. In 2001 we identified 58 species of bird, 7 species of marine mammal, and 6 species of terrestrial mammal on transects sampled during winter and summer. Of course all species are not equally abundant. Among all taxa, in both seasons, sea ducks were the numerically dominant group. In their roles as consumers and because of their generally large size, marine mammals are also likely important in the consumption of energy produced in the Glacier Bay ecosystem. Most common and abundant marine birds and mammals can be placed in either a fish based (e.g. alcids and pinnipeds), or a benthic invertebrate (e.g. sea ducks and sea otters) based food web.Distinct differences in the species composition and abundance of marine birds were observed between winter and summer surveys. Winter marine bird assemblages were dominated numerically (> 11,000; 65% of all birds) by a relatively few species of sea ducks (scoters, goldeneye, Bufflehead, Harlequin and Long-tailed ducks). The sea ducks were distributed almost exclusively along near shore habitats. The prevalence of sea ducks during the March surveys indicates the importance of Glacier Bay as a wintering area for this poorly understood group of animals that occupy a high trophic position in a principally benthic invertebrate (mussel and clam) food web. Marine mammal assemblages were generally consistent between seasons, although Humpback and Killer whales were not observed in winter 2001.Summer marine bird assemblages remained numerically dominated by sea ducks, but species composition shifted between the goldeneye whose density was 44/m2 in winter to < 0.2/m2 in summer, to scoters, whose density was 29/m2 in winter to > 60/m2 in summer. Large increases in Black-legged kittiwake, murrelet (Marbled and Kittlitz’s) and Common merganser densities were detected during summer surveys. Seasonal differences in abundance of species likely reflected differences in life history attributes (e.g. reproductive biology, foraging ecology) among species.Because of differences observed in species composition between the winter and summer, it is apparent that a single annual survey cannot accurately describe the populations of marine birds and mammals that occur in Glacier Bay. Preliminary analysis further suggests that interpretations of data resulting from this type of survey may depend to a large extent on the individual species. Because species exhibit differences in behavior, morphology, coloration, and distribution, accuracy and precision of abundance estimates likely vary among species. Confidence in survey results should be evaluated in consideration of life history and detection probabilities at the species level. However, survey results likely provide reasonable estimates of species composition and relative abundance, as well as accurate abundance estimates for those species whose detection closely approximates one.

Long-term effects of clearcutting on tree species composition in an oak-hickory forest

Treesearch

Jessica A. Yeagle; John W. Groninger

2006-01-01

In 1973, a silvicultural clearcut, with and without a post-harvest herbicide treatment, was performed on an upland oak-hickory forest in southern Illinois. Prior to harvest, permanent plots were established, and a survey was conducted to determine stand structure and composition. In 2003, a post-harvest survey was performed using the permanent plots. Relative density...

Dimensional stability and decay resistance of composite fiberboard made from plantation-grown southern yellow pine

Treesearch

Poo Chow; Timothy Harp; John A. Youngquist; Jim H. Muehl; Andrzej M. Krzysik

1999-01-01

The objective of this study was to investigate the influence of the phenol-formaldehyde resin content level (3 percent and 7 percent), and three fungi species (Poria placenta, Gleophyllum trabeum, and Polyporus versicolor) on the dimensional stability and decay resistance of high density composition boards made from plantation-grown southern pine chips. A standard ASTM...

Changes in plant communities after planting and release of conifer seedlings: Early findings

Treesearch

Philip M. McDonald; Gary O. Fiddler

2001-01-01

Plant diversity, density, and development data from an extensive research program in conifer plantations in northern California suggest changes in plant community composition after site preparation and many kinds of release. Based on 17 studies, the average number of species per study area after 10 years was 25 with composition of 1 conifer, 1 hardwood, 8 shrubs, 12...

Diverse Effects of a Seven-Year Experimental Grassland Fragmentation on Major Invertebrate Groups

PubMed Central

Braschler, Brigitte; Baur, Bruno

2016-01-01

Habitat fragmentation is a major driver of biodiversity loss, but observed effects vary and may depend on the group examined. Time since fragmentation may explain some differences between taxonomical groups, as some species and thus species composition respond with a delay to changes in their environment. Impacts of drivers of global change may thus be underestimated in short-term studies. In our study we experimentally fragmented nutrient-poor dry calcareous grasslands and studied the response of species richness, individual density and species composition of various groups of invertebrates (gastropods, ants, ground beetles, rove beetles, orthoptera, spiders, woodlice) in 12 small (1.5 m * 1.5 m) and 12 large (4.5 m * 4.5 m) fragments and their corresponding control plots after 7 years. We further examined responses to fragmentation in relation to body size and habitat preferences. Responses to fragmentation varied between taxonomical groups. While spider species richness and individual density were lower in fragments, the opposite was true for an orthopteran species and woodlice. Species composition and β-diversity differed between fragments and control plots for some groups. However, the interaction treatment*plot size was rarely significant. Species with high occupancy rates in undisturbed control plots responded more negatively to the fragmentation, while species with large body size were relatively more abundant in fragments in some groups. No effect of the fragmentation was found for ants, which may have the longest lag times because of long-lived colonies. However, relationships between abundance and the species’ preferences for environmental factors affected by edge effects indicate that ant diversity too may be affected in the longer-term. Our results show the importance of considering different groups in conservation management in times of widespread fragmentation of landscapes. While species richness may respond slowly, changes in abundance related to habitat preferences or morphology may allow insights into likely long-term changes. PMID:26891049

Predator biomass, prey density, and species composition effects on group size in recruit coral reef fishes

USGS Publications Warehouse

DeMartini, Edward E.; Anderson, Todd W.; Friedlander, Alan M.; Beets, James P.

2011-01-01

Group incidence and size are described for recruit parrotfishes, wrasses, and damselfishes on Hawaiian reefs over 3 years (2006–2008) at sites spanning the archipelago (20–28°N, 155–177°W). Coral-poor and coral-rich areas were surveyed at sites with both low (Hawaii Island) and high (Midway Atoll) predator densities, facilitating examination of relations among predator and recruit densities, habitat, and group metrics. Predator and recruit densities varied spatially and temporally, with a sixfold range in total recruit densities among years. Group (≥2 recruits) metrics varied with time and tracked predator and recruit densities and the proportion of schooling species. Groups often included heterospecifics whose proportion increased with group size. A non-saturating relationship between group size and recruit density suggests that the anti-predator benefits of aggregation exceeded competitive costs. Grouping behavior may have overarching importance for recruit survival—even at high recruit densities—and merits further study on Hawaiian reefs and elsewhere.

Atomic oxygen ions as ionospheric biomarkers on exoplanets

NASA Astrophysics Data System (ADS)

Mendillo, Michael; Withers, Paul; Dalba, Paul A.

2018-04-01

The ionized form of atomic oxygen (O+) is the dominant ion species at the altitude of maximum electron density in only one of the many ionospheres in our Solar System — Earth's. This ionospheric composition would not be present if oxygenic photosynthesis was not an ongoing mechanism that continuously impacts the terrestrial atmosphere. We propose that dominance of ionospheric composition by O+ ions at the altitude of maximum electron density can be used to identify a planet in orbit around a solar-type star where global-scale biological activity is present. There is no absolute numerical value required for this suggestion of an atmospheric plasma biomarker — only the dominating presence of O+ ions at the altitude of peak electron density.

Climate and species functional traits influence maximum live tree stocking in the Lake States, USA

Treesearch

Mark J. Ducey; Christopher W. Woodall; Andrés Bravo-Oviedo

2017-01-01

Quantifying the density of live trees in forest stands and partitioning it between species or other stand components is critical for predicting forest dynamics and responses to management, as well as understanding the impacts of stand composition and structure on productivity. As plant traits such as shade tolerance have been proven to refine understanding of plant...

The effects of stand structure after thinning on the growth of an Allegheny hardwood stand

Treesearch

David A. Marquis; Richard L. Ernst

1991-01-01

A 50-year-old Allegheny hardwood stand in which the crown canopy had stratified into distinct species groups was thinned to 60% relative density leaving dramatically different stand structures and species composition. Treatments included combined thinning, thin from middle, thin from above, thin from below, and unthinned control. Individual tree growth was stimulated...

Associations of wintering birds with habitat in semidesert and plains grasslands in Arizona

USGS Publications Warehouse

Ruth, Janet M.; Stanley, Thomas R.; Gordon, Caleb E.

2014-01-01

We studied associations with winter habitat for seven species of birds, one species-group (eastern and western meadowlarks combined), and total sparrows at seven sites in the semidesert and plains grasslands of southeastern Arizona from 1999–2001, sampling with mist-nets and survey-transects. We measured structure and composition of vegetation, assessing vegetative differences among sites, and modeled associations between indices of avian abundance and six vegetative variables using generalized linear models. For all vegetative variables, there were significant differences among sites. Numbers of northern harriers (Circus cyaneus) were positively associated with total number of sparrows. Indices of abundance for individual species of birds were statistically correlated with various measures of structure and composition of vegetation. In particular, grasshopper (Ammodramus savannarum) and vesper (Pooecetes gramineus) sparrows were negatively associated with amount of bare ground; horned larks (Eremophila alpestris) were negatively associated with vertical grass density; Baird's sparrows (A. bairdii) were negatively associated with shrub density; meadowlarks (Sturnella magna and S. neglecta combined) were positively associated with native grass. Our results suggest that these species would benefit from management of habitat that affects the vegetative characteristics associated with their abundance.

Proximate composition and energy density of some North Pacific forage fishes

USGS Publications Warehouse

van Pelt, Thomas I.; Piatt, John F.; Lance, Brian K.; Roby, Daniel D.

1997-01-01

Mature pelagic forage fish species (capelin, sand lance, squid) had greater lipid concentrations than juvenile age-classes of large demersal and pelagic fish species (walleye pollock, Pacific cod, Atka mackerel, greenling, prowfish, rockfish, sablefish). Myctophids preyed on by puffins have at least twice as much lipid per gram compared to mature capelin, sand lance and squid, and an order of magnitude greater lipid concentrations than juvenile forage fish. Energy density of forage fishes was positively correlated with lipid content, and negatively correlated with water, ash-free lean dry mass (mostly protein), and ash contents.

Short-term variability and long-term change in the composition of the littoral zone fish community in Spirit Lake, Iowa

USGS Publications Warehouse

Pierce, C.L.; Sexton, M.D.; Pelham, M.E.; Larscheid, J.G.

2001-01-01

We assessed short-term variability and long-term change in the composition of the littoral fish community in Spirit Lake, Iowa. Fish were sampled in several locations at night with large beach seines during spring, summer and fall of 1995-1998. Long-term changes were inferred from comparison with a similar study conducted over 70 y earlier in Spirit Lake. We found 26 species in the littoral zone. The number of species per sample ranged from 4 to 18, averaging 11.8. The average number of species per sample was higher at stations with greater vegetation density. A distinct seasonal pattern was evident in the number of species collected per sample in most years, increasing steadily from spring to fall. Patterns of variability within our 1995-1998 study period suggest that: (1) numerous samples are necessary to adequately characterize a littoral fish community, (2) sampling should be done when vegetation and young-of-year densities are highest and (3) sampling during a single year is inadequate to reveal the full community. The number of native species has declined by approximately 25% over the last 70 y. A coincident decline in littoral vegetation and associated habitat changes during the same period are likely causes of the long-term community change.

Relationships among Egg Size, Composition, and Energy: A Comparative Study of Geminate Sea Urchins

PubMed Central

McAlister, Justin S.; Moran, Amy L.

2012-01-01

Egg size is one of the fundamental parameters in the life histories of marine organisms. However, few studies have examined the relationships among egg size, composition, and energetic content in a phylogenetically controlled context. We investigated the associations among egg size, composition, and energy using a comparative system, geminate species formed by the closure of the Central American Seaway. We examined western Atlantic (WA) and eastern Pacific (EP) species in three echinoid genera, Echinometra, Eucidaris, and Diadema. In the genus with the largest difference in egg size between geminates (Echinometra), the eggs of WA species were larger, lipid rich and protein poor compared to the smaller eggs of their EP geminate. In addition, the larger WA eggs had significantly greater total egg energy and summed biochemical constituents yet significantly lower egg energy density (energy-per-unit-volume). However, the genera with smaller (Eucidaris) or no (Diadema) differences in egg size were not significantly different in summed biochemical constituents, total egg energy, or energy density. Theoretical models generally assume a strong tradeoff between egg size and fecundity that limits energetic investment and constrains life history evolution. We show that even among closely-related taxa, large eggs cannot be assumed to be scaled-up small eggs either in terms of energy or composition. Although our data comes exclusively from echinoid echinoderms, this pattern may be generalizable to other marine invertebrate taxa. Because egg composition and egg size do not necessarily evolve in lockstep, selective factors such as sperm limitation could act on egg volume without necessarily affecting maternal or larval energetics. PMID:22911821

Reduced aboveground tree growth associated with higher arbuscular mycorrhizal fungal diversity in tropical forest restoration.

PubMed

Holste, Ellen K; Holl, Karen D; Zahawi, Rakan A; Kobe, Richard K

2016-10-01

Establishing diverse mycorrhizal fungal communities is considered important for forest recovery, yet mycorrhizae may have complex effects on tree growth depending on the composition of fungal species present. In an effort to understand the role of mycorrhizal fungi community in forest restoration in southern Costa Rica, we sampled the arbuscular mycorrhizal fungal (AMF) community across eight sites that were planted with the same species ( Inga edulis, Erythrina poeppigiana, Terminalia amazonia, and Vochysia guatemalensis ) but varied twofold to fourfold in overall tree growth rates. The AMF community was measured in multiple ways: as percent colonization of host tree roots, by DNA isolation of the fungal species associated with the roots, and through spore density, volume, and identity in both the wet and dry seasons. Consistent with prior tropical restoration research, the majority of fungal species belonged to the genus Glomus and genus Acaulospora , accounting for more than half of the species and relative abundance found on trees roots and over 95% of spore density across all sites. Greater AMF diversity correlated with lower soil organic matter, carbon, and nitrogen concentrations and longer durations of prior pasture use across sites. Contrary to previous literature findings, AMF species diversity and spore densities were inversely related to tree growth, which may have arisen from trees facultatively increasing their associations with AMF in lower soil fertility sites. Changes to AMF community composition also may have led to variation in disturbance susceptibility, host tree nutrient acquisition, and tree growth. These results highlight the potential importance of fungal-tree-soil interactions in forest recovery and suggest that fungal community dynamics could have important implications for tree growth in disturbed soils.

Comparison of leaf-on and leaf-off ALS data for mapping riparian tree species

NASA Astrophysics Data System (ADS)

Laslier, Marianne; Ba, Antoine; Hubert-Moy, Laurence; Dufour, Simon

2017-10-01

Forest species composition is a fundamental indicator of forest study and management. However, describing forest species composition at large scales and of highly diverse populations remains an issue for which remote sensing can provide significant contribution, in particular, Airborne Laser Scanning (ALS) data. Riparian corridors are good examples of highly valuable ecosystems, with high species richness and large surface areas that can be time consuming and expensive to monitor with in situ measurements. Remote sensing could be useful to study them, but few studies have focused on monitoring riparian tree species using ALS data. This study aimed to determine which metrics derived from ALS data are best suited to identify and map riparian tree species. We acquired very high density leaf-on and leaf-off ALS data along the Sélune River (France). In addition, we inventoried eight main riparian deciduous tree species along the study site. After manual segmentation of the inventoried trees, we extracted 68 morphological and structural metrics from both leaf-on and leaf-off ALS point clouds. Some of these metrics were then selected using Sequential Forward Selection (SFS) algorithm. Support Vector Machine (SVM) classification results showed good accuracy with 7 metrics (0.77). Both leaf-on and leafoff metrics were kept as important metrics for distinguishing tree species. Results demonstrate the ability of 3D information derived from high density ALS data to identify riparian tree species using external and internal structural metrics. They also highlight the complementarity of leaf-on and leaf-off Lidar data for distinguishing riparian tree species.

Floral traits influence pollen vectors' choices in higher elevation communities in the Himalaya-Hengduan Mountains.

PubMed

Zhao, Yan-Hui; Ren, Zong-Xin; Lázaro, Amparo; Wang, Hong; Bernhardt, Peter; Li, Hai-Dong; Li, De-Zhu

2016-05-24

How floral traits and community composition influence plant specialization is poorly understood and the existing evidence is restricted to regions where plant diversity is low. Here, we assessed whether plant specialization varied among four species-rich subalpine/alpine communities on the Yulong Mountain, SW China (elevation from 2725 to 3910 m). We analyzed two factors (floral traits and pollen vector community composition: richness and density) to determine the degree of plant specialization across 101 plant species in all four communities. Floral visitors were collected and pollen load analyses were conducted to identify and define pollen vectors. Plant specialization of each species was described by using both pollen vector diversity (Shannon's diversity index) and plant selectiveness (d' index), which reflected how selective a given species was relative to available pollen vectors. Pollen vector diversity tended to be higher in communities at lower elevations, while plant selectiveness was significantly lower in a community with the highest proportion of unspecialized flowers (open flowers and clusters of flowers in open inflorescences). In particular, we found that plant species with large and unspecialized flowers attracted a greater diversity of pollen vectors and showed higher selectiveness in their use of pollen vectors. Plant species with large floral displays and high flower abundance were more selective in their exploitation of pollen vectors. Moreover, there was a negative relationship between plant selectiveness and pollen vector density. These findings suggest that flower shape and flower size can increase pollen vector diversity but they also increased plant selectiveness. This indicated that those floral traits that were more attractive to insects increased the diversity of pollen vectors to plants while decreasing overlap among co-blooming plant species for the same pollen vectors. Furthermore, floral traits had a more important impact on the diversity of pollen vectors than the composition of anthophilous insect communities. Plant selectiveness of pollen vectors was strongly influenced by both floral traits and insect community composition. These findings provide a basis for a better understanding of how floral traits and community context shape interactions between flowers and their pollen vectors in species-rich communities.

Body Size Regression Formulae, Proximate Composition and Energy Density of Eastern Bering Sea Mesopelagic Fish and Squid

PubMed Central

2015-01-01

The ecological significance of fish and squid of the mesopelagic zone (200 m–1000 m) is evident by their pervasiveness in the diets of a broad spectrum of upper pelagic predators including other fishes and squids, seabirds and marine mammals. As diel vertical migrators, mesopelagic micronekton are recognized as an important trophic link between the deep scattering layer and upper surface waters, yet fundamental aspects of the life history and energetic contribution to the food web for most are undescribed. Here, we present newly derived regression equations for 32 species of mesopelagic fish and squid based on the relationship between body size and the size of hard parts typically used to identify prey species in predator diet studies. We describe the proximate composition and energy density of 31 species collected in the eastern Bering Sea during May 1999 and 2000. Energy values are categorized by body size as a proxy for relative age and can be cross-referenced with the derived regression equations. Data are tabularized to facilitate direct application to predator diet studies and food web models. PMID:26287534

Body Size Regression Formulae, Proximate Composition and Energy Density of Eastern Bering Sea Mesopelagic Fish and Squid.

PubMed

Sinclair, Elizabeth H; Walker, William A; Thomason, James R

2015-01-01

The ecological significance of fish and squid of the mesopelagic zone (200 m-1000 m) is evident by their pervasiveness in the diets of a broad spectrum of upper pelagic predators including other fishes and squids, seabirds and marine mammals. As diel vertical migrators, mesopelagic micronekton are recognized as an important trophic link between the deep scattering layer and upper surface waters, yet fundamental aspects of the life history and energetic contribution to the food web for most are undescribed. Here, we present newly derived regression equations for 32 species of mesopelagic fish and squid based on the relationship between body size and the size of hard parts typically used to identify prey species in predator diet studies. We describe the proximate composition and energy density of 31 species collected in the eastern Bering Sea during May 1999 and 2000. Energy values are categorized by body size as a proxy for relative age and can be cross-referenced with the derived regression equations. Data are tabularized to facilitate direct application to predator diet studies and food web models.

Comparison of the abundance and composition of litter fauna in tropical and subalpine forests

Treesearch

G. Gonzalez; T.R. Seastedt

2000-01-01

In this study, we quantify the abundance and composition of the litter fauna in dry and wet tropical forests and north- and south-facing subalpine forests. We used the same litter species contained in litterbags across study sites to standardize for substrate conditions, and a single method of fauna extraction from the litter (Tullgren method). Fauna densities were...

Forest structure and composition in the lower montane rain forest of the Luquillo Mountains, Puerto Rico

Treesearch

Peter L. Weaver

2010-01-01

Six groups of three plots stratified by aspect and topography and varying in elevation were used to sample forest structure and tree species composition within the lower montane rain forest (tabonuco forest) of the Luquillo Experimental Forest (LEF) in Puerto Rico. Stem density, tree height, and total above ground biomass varied by site. Significant differences in...

Plant compositional change in a colony of black-tailed prairie dogs in South Dakota

Treesearch

Richard P. Cincotta; Daniel W. Uresk; Richard M. Hansen

1989-01-01

Peak season multi-species cover of vegetation and burrow mound density were estimated for 3 years along a transect that ran from the geometric center of a black-tailed prairie dog (Cynomys ludovicianus) colony, to its edge. The forb dominated core of the colony expanded 25 m in radius during the study, while plant composition changed dramatically in...

Responses of predatory invertebrates to seeding density and plant species richness in experimental tallgrass prairie restorations

USGS Publications Warehouse

Nemec, Kristine T.; Allen, Craig R.; Danielson, Stephen D.; Helzer, Christopher J.

2014-01-01

In recent decades, agricultural producers and non-governmental organizations have restored thousands of hectares of former cropland in the central United States with native grasses and forbs. However, the ability of these grassland restorations to attract predatory invertebrates has not been well documented, even though predators provide an important ecosystem service to agricultural producers by naturally regulating herbivores. This study assessed the effects of plant richness and seeding density on the richness and abundance of surface-dwelling (ants, ground beetles, and spiders) and aboveground (ladybird beetles) predatory invertebrates. In the spring of 2006, twenty-four 55 m × 55 m-plots were planted to six replicates in each of four treatments: high richness (97 species typically planted by The Nature Conservancy), at low and high seeding densities, and low richness (15 species representing a typical Natural Resources Conservation Service Conservation Reserve Program mix, CP25), at low and high seeding densities. Ants, ground beetles, and spiders were sampled using pitfall traps and ladybird beetles were sampled using sweep netting in 2007–2009. The abundance of ants, ground beetles, and spiders showed no response to seed mix richness or seeding density but there was a significant positive effect of richness on ladybird beetle abundance. Seeding density had a significant positive effect on ground beetle and spider species richness and Shannon–Weaver diversity. These results may be related to differences in the plant species composition and relative amount of grass basal cover among the treatments rather than richness.

Structural and compositional controls on transpiration in 40- and 450-year-old riparian forests in western Oregon, USA.

PubMed

Moore, Georgianne W; Bond, Barbara J; Jones, Julia A; Phillips, Nathan; Meinzer, Federick C

2004-05-01

Large areas of forests in the Pacific Northwest are being transformed to younger forests, yet little is known about the impact this may have on hydrological cycles. Previous work suggests that old trees use less water per unit leaf area or sapwood area than young mature trees of the same species in similar environments. Do old forests, therefore, use less water than young mature forests in similar environments, or are there other structural or compositional components in the forests that compensate for tree-level differences? We investigated the impacts of tree age, species composition and sapwood basal area on stand-level transpiration in adjacent watersheds at the H.J. Andrews Forest in the western Cascades of Oregon, one containing a young, mature (about 40 years since disturbance) conifer forest and the other an old growth (about 450 years since disturbance) forest. Sap flow measurements were used to evaluate the degree to which differences in age and species composition affect water use. Stand sapwood basal area was evaluated based on a vegetation survey for species, basal area and sapwood basal area in the riparian area of two watersheds. A simple scaling exercise derived from estimated differences in water use as a result of differences in age, species composition and stand sapwood area was used to estimate transpiration from late June through October within the entire riparian area of these watersheds. Transpiration was higher in the young stand because of greater sap flux density (sap flow per unit sapwood area) by age class and species, and greater total stand sapwood area. During the measurement period, mean daily sap flux density was 2.30 times higher in young compared with old Douglas-fir (Pseudotsuga menziesii (Mirb.) Franco) trees. Sap flux density was 1.41 times higher in young red alder (Alnus rubra Bong.) compared with young P. menziesii trees, and was 1.45 times higher in old P. menziesii compared with old western hemlock (Tsuga heterophylla (Raf.) Sarg.) trees. Overall, sapwood basal area was 21% higher in the young stand than in the old stand. In the old forest, T. heterophylla is an important co-dominant, accounting for 58% of total sapwood basal area, whereas P. menziesii is the only dominant conifer in the young stand. Angiosperms accounted for 36% of total sapwood basal area in the young stand, but only 7% in the old stand. For all factors combined, we estimated 3.27 times more water use by vegetation in the riparian area of the young stand over the measurement period. Tree age had the greatest effect on stand differences in water use, followed by differences in sapwood basal area, and finally species composition. The large differences in transpiration provide further evidence that forest management alters site water balance via elevated transpiration in vigorous young stands.

A global analysis of bidirectional interactions in alpine plant communities shows facilitators experiencing strong reciprocal fitness costs.

PubMed

Schöb, Christian; Michalet, Richard; Cavieres, Lohengrin A; Pugnaire, Francisco I; Brooker, Rob W; Butterfield, Bradley J; Cook, Bradley J; Kikvidze, Zaal; Lortie, Christopher J; Xiao, Sa; Al Hayek, Patrick; Anthelme, Fabien; Cranston, Brittany H; García, Mary-Carolina; Le Bagousse-Pinguet, Yoann; Reid, Anya M; le Roux, Peter C; Lingua, Emanuele; Nyakatya, Mawethu J; Touzard, Blaise; Zhao, Liang; Callaway, Ragan M

2014-04-01

Facilitative interactions are defined as positive effects of one species on another, but bidirectional feedbacks may be positive, neutral, or negative. Understanding the bidirectional nature of these interactions is a fundamental prerequisite for the assessment of the potential evolutionary consequences of facilitation. In a global study combining observational and experimental approaches, we quantified the impact of the cover and richness of species associated with alpine cushion plants on reproductive traits of the benefactor cushions. We found a decline in cushion seed production with increasing cover of cushion-associated species, indicating that being a benefactor came at an overall cost. The effect of cushion-associated species was negative for flower density and seed set of cushions, but not for fruit set and seed quality. Richness of cushion-associated species had positive effects on seed density and modulated the effects of their abundance on flower density and fruit set, indicating that the costs and benefits of harboring associated species depend on the composition of the plant assemblage. Our study demonstrates 'parasitic' interactions among plants over a wide range of species and environments in alpine systems, and we consider their implications for the possible selective effects of interactions between benefactor and beneficiary species. © 2013 The Authors. New Phytologist © 2013 New Phytologist Trust.

Spatial mismatch analysis among hotspots of alien plant species, road and railway networks in Germany and Austria

PubMed Central

Morelli, Federico

2017-01-01

Road and railway networks are pervasive elements of all environments, which have expanded intensively over the last century in all European countries. These transportation infrastructures have major impacts on the surrounding landscape, representing a threat to biodiversity. Roadsides and railways may function as corridors for dispersal of alien species in fragmented landscapes. However, only few studies have explored the spread of invasive species in relationship to transport network at large spatial scales. We performed a spatial mismatch analysis, based on a spatially explicit correlation test, to investigate whether alien plant species hotspots in Germany and Austria correspond to areas of high density of roads and railways. We tested this independently of the effects of dominant environments in each spatial unit, in order to focus just on the correlation between occurrence of alien species and density of linear transportation infrastructures. We found a significant spatial association between alien plant species hotspots distribution and roads and railways density in both countries. As expected, anthropogenic landscapes, such as urban areas, harbored more alien plant species, followed by water bodies. However, our findings suggested that the distribution of neobiota is strongest correlated to road/railways density than to land use composition. This study provides new evidence, from a transnational scale, that alien plants can use roadsides and rail networks as colonization corridors. Furthermore, our approach contributes to the understanding on alien plant species distribution at large spatial scale by the combination with spatial modeling procedures. PMID:28829818

Evaluating point count efficiency relative to territory mapping in cropland birds

Treesearch

Andre Cyr; Denis Lepage; Kathryn Freemark

1995-01-01

Species richness, composition, and abundance of farmland birds were compared between point counts (50-m, 100-m, and 150-m radius half circles) and territory mapping on three 40-ha plots in Québec, Canada. Point counts of smaller radii tended to have larger density estimates than counts of larger radii. Territory mapping detected 10 species more than 150-m...

Reduced availability of large seeds constrains Atlantic forest regeneration

NASA Astrophysics Data System (ADS)

Costa, Janaina B. P.; Melo, Felipe P. L.; Santos, Bráulio A.; Tabarelli, Marcelo

2012-02-01

Secondary forests are expanding in defaunated fragmented tropical landscapes, but their resilience potential remains poorly understood. In this study we used a chronosequence of advancing (19-62-yr old) Atlantic forest regeneration following slash-and-burn agriculture to infer successional shifts in seed rain in terms of seed density, species richness, taxonomic and functional composition, and local spatial distribution. After monitoring seed rain during 12 months in 60 1-m2 seed traps, we recorded over 400,000 seeds belonging to 180 morphospecies. From early to late-successional stage, seed rain decreased in density, increased in per capita species richness, gradually changed in species composition, and became less aggregated spatially. Regardless the age of forest stand, vertebrate-dispersed seeds accounted for 67-75% of all species recorded. Large-seeded species typical of old-growth forests, on the other hand, accounted for only 5-8% of the species recorded in the seed rain, a proportion around five times smaller than that reported for the old-growth forests of the same study site (31%). Our results suggest that the secondary forests considered, which are embedded in one of the largest (3500 ha) and best preserved remnant of the severely fragmented Atlantic forest of Northeast Brazil, may fail attaining older successional stages due to the reduced availability of large-seeded late-successional species. This regeneration constraint may be even stronger in smaller, more isolated forest remnants of the region, potentially reducing their ability to provide ecosystem services.

Conspecific and Heterospecific Plant Densities at Small-Scale Can Drive Plant-Pollinator Interactions

PubMed Central

Janovský, Zdeněk; Mikát, Michael; Hadrava, Jiří; Horčičková, Eva; Kmecová, Kateřina; Požárová, Doubravka; Smyčka, Jan; Herben, Tomáš

2013-01-01

Generalist pollinators are important in many habitats, but little research has been done on small-scale spatial variation in interactions between them and the plants that they visit. Here, using a spatially explicit approach, we examined whether multiple species of flowering plants occurring within a single meadow showed spatial structure in their generalist pollinator assemblages. We report the results for eight plant species for which at least 200 individual visits were recorded. We found that for all of these species, the proportions of their general pollinator assemblages accounted for by particular functional groups showed spatial heterogeneity at the scale of tens of metres. This heterogeneity was connected either with no or only subtle changes of vegetation and flowering species composition. In five of these species, differences in conspecific plant density influenced the pollinator communities (with greater dominance of main pollinators at low-conspecific plant densities). The density of heterospecific plant individuals influenced the pollinator spectrum in one case. Our results indicate that the picture of plant-pollinator interactions provided by averaging data within large plots may be misleading and that within-site spatial heterogeneity should be accounted for in terms of sampling effort allocation and analysis. Moreover, spatially structured plant-pollinator interactions may have important ecological and evolutionary consequences, especially for plant population biology. PMID:24204818

Density and success of bird nests relative to grazing on western Montana grasslands

USGS Publications Warehouse

Fondell, Thomas F.; Ball, I.J.

2004-01-01

Grassland birds are declining at a faster rate than any other group of North American bird species. Livestock grazing is the primary economic use of grasslands in the western United States, but the effects of this use on distribution and productivity of grassland birds are unclear. We examined nest density and success of ground-nesting birds on grazed and ungrazed grasslands in western Montana. In comparison to grazed plots, ungrazed plots had reduced forb cover, increased litter cover, increased litter depth, and increased visual obstruction readings (VOR) of vegetation. Nest density among 10 of 11 common bird species was most strongly correlated with VOR of plots, and greatest nest density for each species occurred where mean VOR of the plot was similar to mean VOR at nests. Additionally, all bird species were relatively consistent in their choice of VOR at nests despite substantial differences in VOR among plots. We suggest that birds selected plots based in part on availability of suitable nest sites and that variation in nest density relative to grazing reflected the effect of grazing on availability of nest sites. Nest success was similar between grazed plots and ungrazed plots for two species but was lower for nests on grazed plots than on ungrazed plots for two other species because of increased rates of predation, trampling, or parasitism by brown-headed cowbirds (Molothrus ater). Other species nested almost exclusively on ungrazed plots (six species) or grazed plots (one species), precluding evaluation of the effects of grazing on nest success. We demonstrate that each species in a diverse suite of ground-nesting birds preferentially used certain habitats for nesting and that grazing altered availability of preferred nesting habitats through changes in vegetation structure and plant species composition. We also show that grazing directly or indirectly predisposed some bird species to increased nesting mortality. Management alternatives that avoid intensive grazing during the breeding season would be expected to benefit many grassland bird species.

Dispersal rates affect species composition in metacommunities of Sarracenia purpurea inquilines.

PubMed

Kneitel, Jamie M; Miller, Thomas E

2003-08-01

Dispersal among local communities can have a variety of effects on species composition and diversity at local and regional scales. Local conditions (e.g., resource and predator densities) can have independent effects, as well as interact with dispersal, to alter these patterns. Based on metacommunity models, we predicted that local diversity would show a unimodal relationship with dispersal frequency. We manipulated dispersal frequencies, resource levels, and the presence of predators (mosquito larvae) among communities found in the water-filled leaves of the pitcher plant Sarracenia purpurea. Diversity and abundance of species of the middle trophic level, protozoa and rotifers, were measured. Increased dispersal frequencies significantly increased regional species richness and protozoan abundance while decreasing the variance among local communities. Dispersal frequency interacted with predation at the local community scale to produce patterns of diversity consistent with the model. When predators were absent, we found a unimodal relationship between dispersal frequency and diversity, and when predators were present, there was a flat relationship. Intermediate dispersal frequencies maintained some species in the inquiline communities by offsetting extinction rates. Local community composition and the degree of connectivity between communities are both important for understanding species diversity patterns at local and regional scales.

Temporal and spatial variations in the polychaete (Annelida) populations on the upper continental slope of the northern Gulf of Mexico

NASA Astrophysics Data System (ADS)

Qu, Fangyuan; Wang, Yuning; Rowe, Gilbert T.

2017-01-01

Polychaete worms (Annelida), the dominant macrofaunal taxon in most fine-grained marine sediments, were sampled in 1983-85 and then again in 2000-02 at nine locations at depths of 324-1454 m. on the upper continental slope of the northern Gulf of Mexico (GoM). The assemblages exhibited relative stability in abundance and diversity, but fell into six separate groups of species (>35% similarity) that were related to time-of-sampling, location, depth. This depth gradient experiences an increase in oxygen from 2.5 to 4.5 ml/L, a six degree decrease in temperature (10-12° down to 4 °C) and a decline of 30-37 mg C m-2 day-1 down to 7 mg C m-2 day-1 in estimates of the particulate organic carbon (POC) input to the sea floor, but these steep gradients had secondary effects on species turnover or depth-related zonation (Beta diversity). The species composition of four of the six groups was separated on the basis of sampling between 1983-85 and 2000-02 as opposed to depth or location. The species composition of the two groups on the eastern transect was different from the western sites and the two eastern groups differed in species composition from each other between 1983-85 and 2000-02. The two groups of species at the three deeper sites to the west (864-1410 m) were also separated on the basis of time-of-sampling but the group of species located at the three shallow locations (324-625 m) was not; it was a mixture of the two sampling periods. Significantly higher densities (p<0.05) in April 1984, on the eastern transect, suggest that seasonal recruitment may have occurred but the higher densities were attributed to only two species.

Riparian bird density decline in response to biocontrol of Tamarix from riparian ecosystems along the Dolores River in SW Colorado, USA

USGS Publications Warehouse

Darrah, Abigail J.; van Riper, Charles

2018-01-01

Biocontrol of invasive tamarisk (Tamarix spp.) in the arid Southwest using the introduced tamarisk beetle (Diorhabda elongata) has been hypothesized to negatively affect some breeding bird species, but no studies to date have documented the effects of beetle-induced defoliation on riparian bird abundance. We assessed the effects of tamarisk defoliation by monitoring defoliation rates, changes in vegetation composition, and changes in density of six obligate riparian breeding bird species at two sites along the Dolores River in Colorado following the arrival of tamarisk beetles. We conducted bird point counts from 2010 to 2014 and modeled bird density as a function of native vegetation density and extent of defoliation using hierarchical distance sampling. Maximum annual defoliation decreased throughout the study period, peaking at 32–37% in 2009–2010 and dropping to 0.5–15% from 2011–2014. Stem density of both tamarisk and native plants declined throughout the study period until 2014. Density of all bird species declined throughout most of the study, with Song Sparrow disappearing from the study sites after 2011. Blue Grosbeak, Yellow-breasted Chat, and Yellow Warbler densities were negatively related to defoliation in the previous year, while Lazuli Bunting exhibited a positive relationship with defoliation. These findings corroborate earlier predictions of species expected to be sensitive to defoliation as a result of nest site selection. Tamarisk defoliation thus had short-term negative impacts on riparian bird species; active restoration may be needed to encourage the regrowth of native riparian vegetation, which in the longer-term may result in increased riparian bird density.

Changes in Structure and Functioning of Protist (Testate Amoebae) Communities Due to Conversion of Lowland Rainforest into Rubber and Oil Palm Plantations.

PubMed

Krashevska, Valentyna; Klarner, Bernhard; Widyastuti, Rahayu; Maraun, Mark; Scheu, Stefan

2016-01-01

Large areas of tropical rainforest are being converted to agricultural and plantation land uses, but little is known of biodiversity and ecological functioning under these replacement land uses. We investigated the effects of conversion of rainforest into jungle rubber, intensive rubber and oil palm plantations on testate amoebae, diverse and functionally important protists in litter and soil. Living testate amoebae species richness, density and biomass were all lower in replacement land uses than in rainforest, with the impact being more pronounced in litter than in soil. Similar abundances of species of high and low trophic level in rainforest suggest that trophic interactions are more balanced, with a high number of functionally redundant species, than in rubber and oil palm. In contrast, plantations had a low density of high trophic level species indicating losses of functions. This was particularly so in oil palm plantations. In addition, the relative density of species with siliceous shells was >50% lower in the litter layer of oil palm and rubber compared to rainforest and jungle rubber. This difference suggests that rainforest conversion changes biogenic silicon pools and increases silicon losses. Overall, the lower species richness, density and biomass in plantations than in rainforest, and the changes in the functional composition of the testate amoebae community, indicate detrimental effects of rainforest conversion on the structure and functioning of microbial food webs.

Long Term Positive Effect of Grassland Restoration on Plant Diversity - Success or Not?

PubMed Central

Lindborg, Regina

2016-01-01

Restoration is important for biodiversity conservation worldwide, but surprisingly little is known about its efficiency in a long-term perspective. In this study, we re-examined Swedish semi-natural grasslands 12–20 years after the restoration, by comparing field inventories of vascular plant species diversity made in 2001 with follow-up inventories in 2012. We also analysed restoration effect in relation to six environmental factors and used continuously managed semi-natural grasslands as references of desired state after restoration. We found that total species richness increased over time but not to reference levels, while there were no significant changes in species density or number of grassland specialists. However, the overall species composition in the restored sites, as well as grassland specialist composition, now largely resembled reference conditions. Fertilisation and time between abandonment and restoration were the only environmental variables that affected total species composition change, while site area affected change in grassland specialist composition. Our results show that restoration of semi-natural grasslands can contribute to conservation of semi-natural habitats and their associated biodiversity. Yet, due to the vague restoration goals for these sites, it is difficult to evaluate the restoration success, which emphasise the general need for clear and measurable goals. PMID:27196748

Long Term Positive Effect of Grassland Restoration on Plant Diversity - Success or Not?

PubMed

Waldén, Emelie; Lindborg, Regina

2016-01-01

Restoration is important for biodiversity conservation worldwide, but surprisingly little is known about its efficiency in a long-term perspective. In this study, we re-examined Swedish semi-natural grasslands 12-20 years after the restoration, by comparing field inventories of vascular plant species diversity made in 2001 with follow-up inventories in 2012. We also analysed restoration effect in relation to six environmental factors and used continuously managed semi-natural grasslands as references of desired state after restoration. We found that total species richness increased over time but not to reference levels, while there were no significant changes in species density or number of grassland specialists. However, the overall species composition in the restored sites, as well as grassland specialist composition, now largely resembled reference conditions. Fertilisation and time between abandonment and restoration were the only environmental variables that affected total species composition change, while site area affected change in grassland specialist composition. Our results show that restoration of semi-natural grasslands can contribute to conservation of semi-natural habitats and their associated biodiversity. Yet, due to the vague restoration goals for these sites, it is difficult to evaluate the restoration success, which emphasise the general need for clear and measurable goals.

Effects of Re-vegetation on Herbaceous Species Composition and Biological Soil Crusts Development in a Coal Mine Dumping Site

NASA Astrophysics Data System (ADS)

Zhao, Yang; Zhang, Peng; Hu, Yigang; Huang, Lei

2016-02-01

Despite the critical roles of plant species' diversity and biological soil crusts (BSCs) in arid and semi-arid ecosystems, the restoration of the diversity of herbaceous species and BSCs are rarely discussed during the process of vegetation restoration of anthropogenically damaged areas in these regions. In this study, the herbaceous plant species composition, along with the BSCs coverage and thicknesses, was investigated at six different re-vegetation type sites, and the natural vegetation site of the Heidaigou open pit coal mine in China's Inner Mongolia Autonomous Region was used as a reference. The highest total species richness (16), as well as the species richness (4.4), occurred in the Tree and Herbaceous vegetation type site. The species composition similarities between the restored sites and the reference site were shown to be very low, and ranged from 0.09 to 0.42. Also, among the restored sites, the similarities of the species were fairly high and similar, and ranged from 0.45 to 0.93. The density and height of the re-vegetated woody plants were significantly correlated with the indexes of the diversity of the species. The Shrub vegetation type site showed the greatest total coverage (80 %) of BSCs and algae crust coverage (48 %). The Shrub and Herbaceous type had the greatest thicknesses of BSCs, with as much as 3.06 mm observed, which was followed by 2.64 mm for the Shrub type. There was a significant correlation observed between the coverage of the total BSCs, and the total vegetation and herbaceous vegetation coverage, as well as between the algae crust coverage and the herbaceous vegetation coverage. It has been suggested that the re-vegetated dwarf woody plant species (such as shrubs and semi-shrubs) should be chosen for the optimal methods of the restoration of herbaceous species diversity at dumping sites, and these should be planted with low density. Furthermore, the effects of vegetation coverage on the colonization and development the BSCs should be considered in order to reconstruct the vegetation in disturbed environments, such as mine dumpsites in arid areas.

Electrosynthesis of nanofibers and nano-composite films

DOEpatents

Lin, Yuehe; Liang, Liang; Liu, Jun

2006-10-17

A method for producing an array of oriented nanofibers that involves forming a solution that includes at least one electroactive species. An electrode substrate is brought into contact with the solution. A current density is applied to the electrode substrate that includes at least a first step of applying a first substantially constant current density for a first time period and a second step of applying a second substantially constant current density for a second time period. The first and second time periods are of sufficient duration to electrically deposit on the electrode substrate an array of oriented nanofibers produced from the electroactive species. Also disclosed are films that include arrays or networks of oriented nanofibers and a method for amperometrically detecting or measuring at least one analyte in a sample.

Ants of three adjacent habitats of a transition region between the cerrado and caatinga biomes: the effects of heterogeneity and variation in canopy cover.

PubMed

Neves, F S; Queiroz-Dantas, K S; da Rocha, W D; Delabie, J H C

2013-06-01

Habitat heterogeneity and complexity associated with variations in climatic conditions are important factors determining the structure of ant communities in different terrestrial ecosystems. The objective of this study was to describe the horizontal and vertical distribution patterns of the ant community associated with three adjacent habitats in a transition area between the Cerrado and Caatinga biomes at the Pandeiros River, state of Minas Gerais, Brazil. We tested the following hypotheses: (1) the richness and composition of ant species and functional group structure changes between different habitats and strata; (2) habitats with higher tree species richness and density support higher ant species richness; and (3) habitats with lower variation in canopy cover support higher ant species richness. Sampling was conducted in three adjacent habitats and at three vertical strata. Ant species richness was significantly different among vertical strata. Ant species composition was different among both habitats and vertical strata and functional group structure was divergent among habitats. Partitioning of the diversity revealed that the diversity for the three components was statistically different from the one expected by the null model; α and β 2 were higher and β 1 was lower than the values expected by chance. Tree density and variation in canopy cover negatively affected ant species richness. The occurrence of different species and the changing of functional group structures in different habitats and strata suggest an ecological-evolutionary relationship between ants and their habitats and emphasize the need to implement local conservation strategies in the ecotones between biomes.

How do patch quality and spatial context affect invertebrate communities in a natural moss microlandscape?

NASA Astrophysics Data System (ADS)

Trekels, Hendrik; Driesen, Mario; Vanschoenwinkel, Bram

2017-11-01

Globally, moss associated invertebrates remain poorly studied and it is largely unknown to what extent their diversity is driven by local environmental conditions or the landscape context. Here, we investigated small scale drivers of invertebrate communities in a moss landscape in a temperate forest in Western Europe. By comparing replicate quadrats of 5 different moss species in a continuous moss landscape, we found that mosses differed in invertebrate density and community composition. Although, in general, richness was similar among moss species, some invertebrate taxa were significantly linked to certain moss species. Only moss biomass and not relative moisture content could explain differences in invertebrate densities among moss species. Second, we focused on invertebrate communities associated with the locally common moss species Kindbergia praelonga in isolated moss patches on dead tree trunks to look at effects of patch size, quality, heterogeneity and connectivity on invertebrate communities. Invertebrate richness was higher in patches under closed canopies than under more open canopies, presumably due to the higher input of leaf litter and/or lower evaporation. In addition, increased numbers of other moss species in the same patch seemed to promote invertebrate richness in K. praelonga, possibly due to mass effects. Since invertebrate richness was unaffected by patch size and isolation, dispersal was probably not limiting in this system with patches separated by tens of meters, or stochastic extinctions may be uncommon. Overall, we conclude that invertebrate composition in moss patches may not only depend on local patch conditions, in a particular moss species, but also on the presence of other moss species in the direct vicinity.

Micro-organisms behind the pollination scenes: microbial imprint on floral nectar sugar variation in a tropical plant community.

PubMed

Canto, A; Herrera, C M

2012-11-01

Variation in the composition of floral nectar reflects intrinsic plant characteristics as well as the action of extrinsic factors. Micro-organisms, particularly yeasts, represent one extrinsic factor that inhabit the nectar of animal-pollinated flowers worldwide. In this study a 'microbial imprint hypothesis' is formulated and tested, in which it is proposed that natural community-wide variation in nectar sugar composition will partly depend on the presence of yeasts in flowers. Occurrence and density of yeasts were studied microscopically in single-flower nectar samples of 22 animal-pollinated species from coastal xeric and sub-humid tropical habitats of the Yucatán Peninsula, Mexico. Nectar sugar concentration and composition were concurrently determined on the same samples using high-performance liquid chromatography (HPLC) methods. Microscopical examination of nectar samples revealed the presence of yeasts in nearly all plant species (21 out of 22 species) and in about half of the samples examined (51·8 % of total, all species combined). Plant species and individuals differed significantly in nectar sugar concentration and composition, and also in the incidence of nectar yeasts. After statistically controlling for differences between plant species and individuals, nectar yeasts still accounted for a significant fraction of community-wide variance in all nectar sugar parameters considered. Significant yeast × species interactions on sugar parameters revealed that plant species differed in the nectar sugar correlates of variation in yeast incidence. The results support the hypothesis that nectar yeasts impose a detectable imprint on community-wide variation in nectar sugar composition and concentration. Since nectar sugar features influence pollinator attraction and plant reproduction, future nectar studies should control for yeast presence and examine the extent to which microbial signatures on nectar characteristics ultimately have some influence on pollination services in plant communities.

Status and trends of pelagic prey fishes in Lake Huron, 2012

USGS Publications Warehouse

Warner, David M.; O'Brien, Timothy P.; Farha, Steve A.; Schaeffer, Jeff; Lenart, Stephen

2012-01-01

The USGS Great Lakes Science Center (GLSC) conducted acoustic/midwater trawl surveys of Lake Huron during 1997 and annually during 2004-2012. The 2012 survey was conducted during September and October, and included transects in Lake Huron’s Main Basin, Georgian Bay, and North Channel. Pelagic fish density (638 fish/ha) was lower in 2012 compared to 2011, with density in 2012 only 34% of 2011. Total biomass in 2012 was 74% of the 2011 value. Alewife Alosa pseudoharengus remained nearly absent, and only one cisco Coregonus artedi was captured. Rainbow smelt Osmerus mordax density was only 31% of the 2011 density. Bloater Coregonus hoyi density was less than half the 2011 density, mostly as a result of lower density of small bloater. Density and biomass of large bloater in 2012 were similar to 2011 levels. During 2012 we observed significantly higher fish biomass in North Channel than in the Main Basin or Georgian Bay. Prey availability during 2013 will likely be similar to 2012. Lake Huron now has pelagic fish biomass similar to that observed in recent lakewide acoustic surveys of Lake Michigan and Lake Superior, but species composition differs in the three lakes. There is an increasing diversity and prevalence of native species gradient from Lake Michigan to Lake Superior, with Lake Huron being intermediate in the prevalence of native fish species like coregonines and emerald shiner Notropis atherinoides.

Status and trends of pelagic prey fishes in Lake Huron, 2012

USGS Publications Warehouse

Warner, David M.; O'Brien, Timothy P.; Farha, Steve A.; Schaeffer, Jeff; Lenart, Stephen

2013-01-01

The USGS Great Lakes Science Center (GLSC) conducted acoustic/midwater trawl surveys of Lake Huron during 1997 and annually during 2004-2012. The 2012 survey was conducted during September and October, and included transects in Lake Huron’s Main Basin, Georgian Bay, and North Channel. Pelagic fish density (638 fish/ha) was lower in 2012 compared to 2011, with density in 2012 only 34% of 2011. Total biomass in 2012 was 74% of the 2011 value. Alewife Alosa pseudoharengus remained nearly absent, and only one cisco Coregonus artedi was captured. Rainbow smelt Osmerus mordax density was only 31% of the 2011 density. Bloater Coregonus hoyi density was less than half the 2011 density, mostly as a result of lower density of small bloater. Density and biomass of large bloater in 2012 were similar to 2011 levels. During 2012 we observed significantly higher fish biomass in North Channel than in the Main Basin or Georgian Bay. Prey availability during 2013 will likely be similar to 2012. Lake Huron now has pelagic fish biomass similar to that observed in recent lakewide acoustic surveys of Lake Michigan and Lake Superior, but species composition differs in the three lakes. There is an increasing diversity and prevalence of native species gradient from Lake Michigan to Lake Superior, with Lake Huron being intermediate in the prevalence of native fish species like coregonines and emerald shiner Notropis atherinoides.

Weed species composition and distribution pattern in the maize crop under the influence of edaphic factors and farming practices: A case study from Mardan, Pakistan.

PubMed

Ahmad, Zeeshan; Khan, Shujaul Mulk; Abd Allah, Elsayed Fathi; Alqarawi, Abdulaziz Abdullah; Hashem, Abeer

2016-11-01

Weeds are unwanted plant species growing in ordinary environment. In nature there are a total of 8000 weed species out of which 250 are important for agriculture world. The present study was carried out on weed species composition and distribution pattern with special reference to edaphic factor and farming practices in maize crop of District Mardan during the months of August and September, 2014. Quadrates methods were used to assess weed species distribution in relation to edaphic factor and farming practices. Phytosociological attributes such as frequency, relative frequency, density, relative density and Importance Values were measured by placing 9 quadrates (1 × 1 m 2 ) randomly in each field. Initial results showed that the study area has 29 diverse weed species belonging to 27 genera and 15 families distributed in 585 quadrats. Presence and absence data sheet of 29 weed species and 65 fields were analyzed through PC-ORD version 5. Cluster and Two Way Cluster Analyses initiated four different weed communities with significant indicator species and with respect to underlying environmental variables using data attribute plots. Canonical Correspondence Analyses (CCA) of CANOCO software version 4.5 was used to assess the environmental gradients of weed species. It is concluded that among all the edaphic factors the strongest variables were higher concentration of potassium, organic matter and sandy nature of soil. CCA plots of both weed species and sampled fields based on questionnaire data concluded the farming practices such as application of fertilizers, irrigation and chemical spray were the main factors in determination of weed communities.

Tree mortality from fire and bark beetles following early and late season prescribed fires in a Sierra Nevada mixed conifer forest

Treesearch

Dylan W. Schwilk; Eric E. Knapp; Scott M. Ferrenberg; Jon E. Keeley; Anthony. Caprio

2006-01-01

Over the last century, fire exclusion in the forests of the Sierra Nevada has allowed surface fuels to accumulate and has led to increased tree density. Stand composition has also been altered as shade tolerant tree species crowd out shade intolerant species. To restore forest structure and reduce the risk of large, intense fires, managers have increasingly used...

Urbanization effects on fishes and habitat quality in a southern Piedmont river basin

USGS Publications Warehouse

Walters, D.M.; Freeman, Mary C.; Leigh, D.S.; Freeman, B.J.; Pringle, C.P.; Brown, Larry R.; Gray, Robert H.; Hughes, Robert H.; Meador, Michael

2005-01-01

We quantified the relationships among urban land cover, fishes, and habitat quality to determine how fish assemblages respond to urbanization and if a habitat index can be used as an indirect measure of urban effects on stream ecosystems. We sampled 30 wadeable streams along an urban gradient (5?37% urban land cover) in the Etowah River basin, Georgia. Fish assemblages, sampled by electrofishing standardized stream reaches, were assessed using species richness, density, and species composition metrics. Habitat quality was scored using the Rapid Habitat Assessment Protocol (RHAP) of the U.S. Environmental Protection Agency. Urban land cover (including total, high-, and low-density urban) was estimated for the drainage basin above each reach. A previous study of these sites indicated that stream slope and basin area were strongly related to local variation in assemblage structure. We used multiple linear regression (MLR) analysis to account for this variation and isolate the urban effect on fishes. The MLR models indicated that urbanization lowered species richness and density and led to predictable changes in species composition. Darters and sculpin, cyprinids, and endemics declined along the urban gradient whereas centrarchids persisted and became the dominant group. The RHAP was not a suitable indicator of urban effects because RHAP-urban relationships were confounded by an overriding influence of stream slope on RHAP scores, and urban-related changes in fish assemblage structure preceded gross changes in stream habitat quality. Regression analysis indicated that urban effects on fishes accrue rapidly (<10 years) and are detectable at low levels (~5?10% urbanization). We predict that the decline of endemics and other species will continue and centrarchid-dominated streams will become more common as development proceeds within the Etowah basin.

Evaluating the suitability of planted forests for African forest monkeys: a case study from Kakamega forest, Kenya.

PubMed

Fashing, Peter J; Nguyen, Nga; Luteshi, Patrick; Opondo, Winstone; Cash, Julie F; Cords, Marina

2012-01-01

As natural forest cover declines, planted forests have come to occupy an increasing percentage of the earth's surface, yet we know little about their suitability as alternative habitat for wildlife. Although some primate species use planted forests, few studies have compared primate populations in natural and nearby planted forests. From March 2006 to July 2010, we conducted line transect surveys and assessed group sizes and compositions in natural and nearby 60-70 year old mixed indigenous planted forest to determine the densities of diurnal primate species (Colobus guereza, Cercopithecus mitis, C. ascanius) in these two forest types at Isecheno, Kakamega Forest, Kenya. Line transect data were analyzed using the Encounter Rate, Whitesides, and Distance sampling methods, which all provided broadly consistent results. We found that all three diurnal primate species occupy both natural and planted forest at Isecheno. However, group densities of the two Cercopithecus species were 42-46% lower in planted than in natural forest. Colobus guereza achieved comparable group densities in the two forest types, although the species is found in smaller groups, and thus at lower (35%) individual density, in planted than in natural forest. Following a logging episode in the planted forest mid-way through our study, Cercopithecus ascanius group densities fell by 60% while C. mitis and Colobus guereza group densities remained stable over the next two years. Overall, our results suggest that while primate species vary in their response to habitat disturbance, planted forest has the potential to contribute to the conservation of some African monkey species. Even for the relatively flexible taxa in our study, however, 60-70 year old mixed indigenous planted forest failed to support densities comparable to those in nearby natural forest. From the perspective of Kakamega's primates, planted forests may supplement natural forest, but are not an adequate replacement for it. © 2011 Wiley Periodicals, Inc.

Breeding bird response to juniper woodland expansion

USGS Publications Warehouse

Rosenstock, Steven S.; van Riper, Charles

2001-01-01

In recent times, pinyon (Pinus spp.)-juniper (Juniperus spp.) woodlands have expanded into large portions of the Southwest historically occupied by grassland vegetation. From 1997-1998, we studied responses of breeding birds to one-seed juniper (J. monosperma) woodland expansion at 2 grassland study areas in northern Arizona. We sampled breeding birds in 3 successional stages along a grassland-woodland gradient: un-invaded grassland, grassland undergoing early stages of juniper establishment, and developing woodland. Species composition varied greatly among successional stages and was most different between endpoints of the gradient. Ground-nesting grassland species predominated in uninvaded grassland but declined dramatically as tree density increased. Tree- and cavity-nesting species increased with tree density and were most abundant in developing woodland. Restoration of juniper-invaded grasslands will benefit grassland-obligate birds and other wildlife.

Urban heat island effect on cicada densities in metropolitan Seoul.

PubMed

Nguyen, Hoa Q; Andersen, Desiree K; Kim, Yuseob; Jang, Yikweon

2018-01-01

Urban heat island (UHI) effect, the ubiquitous consequence of urbanization, is considered to play a major role in population expansion of numerous insects. Cryptotympana atrata and Hyalessa fuscata are the most abundant cicada species in the Korean Peninsula, where their population densities are higher in urban than in rural areas. We predicted a positive relationship between the UHI intensities and population densities of these two cicada species in metropolitan Seoul. To test this prediction, enumeration surveys of cicada exuviae densities were conducted in 36 localities located within and in the vicinity of metropolitan Seoul. Samples were collected in two consecutive periods from July to August 2015. The abundance of each species was estimated by two resource-weighted densities, one based on the total geographic area, and the other on the total number of trees. Multiple linear regression analyses were performed to identify factors critical for the prevalence of cicada species in the urban habitat. C. atrata and H. fuscata were major constituents of cicada species composition collected across all localities. Minimum temperature and sampling period were significant factors contributing to the variation in densities of both species, whereas other environmental factors related to urbanization were not significant. More cicada exuviae were collected in the second rather than in the first samplings, which matched the phenological pattern of cicadas in metropolitan Seoul. Cicada population densities increased measurably with the increase in temperature. Age of residential complex also exhibited a significantly positive correlation to H. fuscata densities, but not to C. atrata densities. Effects of temperature on cicada densities have been discerned from other environmental factors, as cicada densities increased measurably in tandem with elevated temperature. Several mechanisms may contribute to the abundance of cicadas in urban environments, such as higher fecundity of females, lower mortality rate of instars, decline in host plant quality, and local adaptation of organisms, but none of them were tested in the current study. In sum, results of the enumeration surveys of cicada exuviae support the hypothesis that the UHI effect underlies the population expansion of cicadas in metropolitan Seoul. Nevertheless, the underlying mechanisms for this remain untested.

Ecological and Evolutionary Effects of Stickleback on Community Structure

PubMed Central

Des Roches, Simone; Shurin, Jonathan B.; Schluter, Dolph; Harmon, Luke J.

2013-01-01

Species’ ecology and evolution can have strong effects on communities. Both may change concurrently when species colonize a new ecosystem. We know little, however, about the combined effects of ecological and evolutionary change on community structure. We simultaneously examined the effects of top-predator ecology and evolution on freshwater community parameters using recently evolved generalist and specialist ecotypes of three-spine stickleback (Gasterosteus aculeatus). We used a mesocosm experiment to directly examine the effects of ecological (fish presence and density) and evolutionary (phenotypic diversity and specialization) factors on community structure at lower trophic levels. We evaluated zooplankton biomass and composition, periphyton and phytoplankton chlorophyll-a concentration, and net primary production among treatments containing different densities and diversities of stickleback. Our results showed that both ecological and evolutionary differences in the top-predator affect different aspects of community structure and composition. Community structure, specifically the abundance of organisms at each trophic level, was affected by stickleback presence and density, whereas composition of zooplankton was influenced by stickleback diversity and specialization. Primary productivity, in terms of chlorophyll-a concentration and net primary production was affected by ecological but not evolutionary factors. Our results stress the importance of concurrently evaluating both changes in density and phenotypic diversity on the structure and composition of communities. PMID:23573203

Development of a size reduction equation for woody biomass: The influence of branch wood properties on Rittinger's constant

DOE PAGES

Naimi, Ladan J.; Sokhansanj, Shahabaddine; Bi, Xiaotao; ...

2015-11-25

Size reduction is an essential but energy-intensive process for preparing biomass for conversion processes. Three well-known scaling equations (Bond, Kick, and Rittinger) are used to estimate energy input for grinding minerals and food particles. Previous studies have shown that the Rittinger equation has the best fit to predict energy input for grinding cellulosic biomass. In the Rittinger equation, Rittinger's constant (k R) is independent of the size of ground particles, yet we noted large variations in k R among similar particle size ranges. In this research, the dependence of k R on the physical structure and chemical composition of amore » number of woody materials was explored. Branches from two softwood species (Douglas fir and pine) and two hardwood species (aspen and poplar) were ground in a laboratory knife mill. The recorded data included power input, mass flow rate, and particle size before and after grinding. Nine material properties were determined: particle density, solid density (pycnometer and x-ray diffraction methods), microfibril angle, fiber coarseness, fiber length, and composition (lignin and cellulose glucan contents). The correlation matrix among the nine properties revealed high degrees of interdependence between properties. The k R value had the largest positive correlation (+0.60) with particle porosity across the species tested. As a result, particle density was strongly correlated with lignin content (0.85), microfibril angle (0.71), fiber length (0.87), and fiber coarseness (0.78). An empirical model relating k R to particle density was developed.« less

Development of a size reduction equation for woody biomass: The influence of branch wood properties on Rittinger's constant

DOE Office of Scientific and Technical Information (OSTI.GOV)

Naimi, Ladan J.; Sokhansanj, Shahabaddine; Bi, Xiaotao

Size reduction is an essential but energy-intensive process for preparing biomass for conversion processes. Three well-known scaling equations (Bond, Kick, and Rittinger) are used to estimate energy input for grinding minerals and food particles. Previous studies have shown that the Rittinger equation has the best fit to predict energy input for grinding cellulosic biomass. In the Rittinger equation, Rittinger's constant (k R) is independent of the size of ground particles, yet we noted large variations in k R among similar particle size ranges. In this research, the dependence of k R on the physical structure and chemical composition of amore » number of woody materials was explored. Branches from two softwood species (Douglas fir and pine) and two hardwood species (aspen and poplar) were ground in a laboratory knife mill. The recorded data included power input, mass flow rate, and particle size before and after grinding. Nine material properties were determined: particle density, solid density (pycnometer and x-ray diffraction methods), microfibril angle, fiber coarseness, fiber length, and composition (lignin and cellulose glucan contents). The correlation matrix among the nine properties revealed high degrees of interdependence between properties. The k R value had the largest positive correlation (+0.60) with particle porosity across the species tested. As a result, particle density was strongly correlated with lignin content (0.85), microfibril angle (0.71), fiber length (0.87), and fiber coarseness (0.78). An empirical model relating k R to particle density was developed.« less

Prey Selection of Scandinavian Wolves: Single Large or Several Small?

PubMed

Sand, Håkan; Eklund, Ann; Zimmermann, Barbara; Wikenros, Camilla; Wabakken, Petter

2016-01-01

Research on large predator-prey interactions are often limited to the predators' primary prey, with the potential for prey switching in systems with multiple ungulate species rarely investigated. We evaluated wolf (Canis lupus) prey selection at two different spatial scales, i.e., inter- and intra-territorial, using data from 409 ungulate wolf-kills in an expanding wolf population in Scandinavia. This expansion includes a change from a one-prey into a two-prey system with variable densities of one large-sized ungulate; moose (Alces alces) and one small-sized ungulate; roe deer (Capreolus capreolus). Among wolf territories, the proportion of roe deer in wolf kills was related to both pack size and roe deer density, but not to moose density. Pairs of wolves killed a higher proportion of roe deer than did packs, and wolves switched to kill more roe deer as their density increased above a 1:1 ratio in relation to the availability of the two species. At the intra-territorial level, wolves again responded to changes in roe deer density in their prey selection whereas we found no effect of snow depth, time during winter, or other predator-related factors on the wolves' choice to kill moose or roe deer. Moose population density was only weakly related to intra-territorial prey selection. Our results show that the functional response of wolves on moose, the species hitherto considered as the main prey, was strongly dependent on the density of a smaller, alternative, ungulate prey. The impact of wolf predation on the prey species community is therefore likely to change with the composition of the multi-prey species community along with the geographical expansion of the wolf population.

Prey Selection of Scandinavian Wolves: Single Large or Several Small?

PubMed Central

Eklund, Ann; Zimmermann, Barbara; Wikenros, Camilla; Wabakken, Petter

2016-01-01

Research on large predator-prey interactions are often limited to the predators’ primary prey, with the potential for prey switching in systems with multiple ungulate species rarely investigated. We evaluated wolf (Canis lupus) prey selection at two different spatial scales, i.e., inter- and intra-territorial, using data from 409 ungulate wolf-kills in an expanding wolf population in Scandinavia. This expansion includes a change from a one-prey into a two-prey system with variable densities of one large-sized ungulate; moose (Alces alces) and one small-sized ungulate; roe deer (Capreolus capreolus). Among wolf territories, the proportion of roe deer in wolf kills was related to both pack size and roe deer density, but not to moose density. Pairs of wolves killed a higher proportion of roe deer than did packs, and wolves switched to kill more roe deer as their density increased above a 1:1 ratio in relation to the availability of the two species. At the intra-territorial level, wolves again responded to changes in roe deer density in their prey selection whereas we found no effect of snow depth, time during winter, or other predator-related factors on the wolves’ choice to kill moose or roe deer. Moose population density was only weakly related to intra-territorial prey selection. Our results show that the functional response of wolves on moose, the species hitherto considered as the main prey, was strongly dependent on the density of a smaller, alternative, ungulate prey. The impact of wolf predation on the prey species community is therefore likely to change with the composition of the multi-prey species community along with the geographical expansion of the wolf population. PMID:28030549

Changes in zooplankton community, and seston and zooplankton fatty acid profiles at the freshwater/saltwater interface of the Chowan River, North Carolina

PubMed Central

Rinchard, Jacques; Kimmel, David G.

2017-01-01

The variability in zooplankton fatty acid composition may be an indicator of larval fish habitat quality as fatty acids are linked to fish larval growth and survival. We sampled an anadromous fish nursery, the Chowan River, during spring of 2013 in order to determine how the seston fatty acid composition varied in comparison with the zooplankton community composition and fatty acid composition during the period of anadromous larval fish residency. The seston fatty acid profiles showed no distinct pattern in relation to sampling time or location. The mesozooplankton community composition varied spatially and the fatty acid profiles were typical of freshwater species in April. The Chowan River experienced a saltwater intrusion event during May, which resulted in brackish water species dominating the zooplankton community and the fatty acid profile showed an increase in polyunsaturated fatty acids (PUFA), in particular eicosapentaenoic acid (EPA) and docosahexaenoic acid (DHA). The saltwater intrusion event was followed by an influx of freshwater due to high precipitation levels in June. The zooplankton community composition once again became dominated by freshwater species and the fatty acid profiles shifted to reflect this change; however, EPA levels remained high, particularly in the lower river. We found correlations between the seston, microzooplankton and mesozooplankton fatty acid compositions. Salinity was the main factor correlated to the observed pattern in species composition, and fatty acid changes in the mesozooplankton. These data suggest that anadromous fish nursery habitat likely experiences considerable spatial variability in fatty acid profiles of zooplankton prey and that are correlated to seston community composition and hydrodynamic changes. Our results also suggest that sufficient prey density as well as a diverse fatty acid composition is present in the Chowan River to support larval fish production. PMID:28828262

Multiple browsers structure tree recruitment in logged temperate forests

USGS Publications Warehouse

Faison, Edward K.; DeStefano, Stephen; Foster, David R.; Rapp, Joshua M.; Compton, Justin A.

2016-01-01

Historical extirpations have resulted in depauperate large herbivore assemblages in many northern forests. In eastern North America, most forests are inhabited by a single wild ungulate species, white-tailed deer (Odocoileus virginianus), and relationships between deer densities and impacts on forest regeneration are correspondingly well documented. Recent recolonizations by moose (Alces americanus) in northeastern regions complicate established deer density thresholds and predictions of browsing impacts on forest dynamics because size and foraging differences between the two animals suggest a lack of functional redundancy. We asked to what extent low densities of deer + moose would structure forest communities differently from that of low densities of deer in recently logged patch cuts of Massachusetts, USA. In each site, a randomized block with three treatment levels of large herbivores–no-ungulates (full exclosure), deer (partial exclosure), and deer + moose (control) was established. After 6–7 years, deer + moose reduced stem densities and basal area by 2-3-fold, Prunus pensylvanica and Quercus spp. recruitment by 3–6 fold, and species richness by 1.7 species (19%). In contrast, in the partial exclosures, deer had non-significant effects on stem density, basal area, and species composition, but significantly reduced species richness by 2.5 species on average (28%). Deer browsing in the partial exclosure was more selective than deer + moose browsing together, perhaps contributing to the decline in species richness in the former treatment and the lack of additional decline in the latter. Moose used the control plots at roughly the same frequency as deer (as determined by remote camera traps), suggesting that the much larger moose was the dominant browser species in terms of animal biomass in these cuts. A lack of functional redundancy with respect to foraging behavior between sympatric large herbivores may explain combined browsing effects that were both large and complex.

Correlates of bushmeat in markets and depletion of wildlife.

PubMed

Fa, John E; Olivero, Jesus; Farfán, Miguel Á; Márquez, Ana L; Duarte, Jesús; Nackoney, Janet; Hall, Amy; Dupain, Jef; Seymour, Sarah; Johnson, Paul J; Macdonald, David W; Real, Raimundo; Vargas, Juan M

2015-06-01

We used data on number of carcasses of wildlife species sold in 79 bushmeat markets in a region of Nigeria and Cameroon to assess whether species composition of a market could be explained by anthropogenic pressures and environmental variables around each market. More than 45 mammal species from 9 orders were traded across all markets; mostly ungulates and rodents. For each market, we determined median body mass, species diversity (game diversity), and taxa that were principal contributors to the total number of carcasses for sale (game dominance). Human population density in surrounding areas was significantly and negatively related to the percentage ungulates and primates sold in markets and significantly and positively related to the proportion of rodents. The proportion of carnivores sold was higher in markets with high human population densities. Proportion of small-bodied mammals (<1 kg) sold in markets increased as human population density increased, but proportion of large-bodied mammals (>10 kg) decreased as human population density increased. We calculated an index of game depletion (GDI) for each market from the sum of the total number of carcasses traded per annum and species, weighted by the intrinsic rate of natural increase (rmax ) of each species, divided by individuals traded in a market. The GDI of a market increased as the proportion of fast-reproducing species (highest rmax ) increased and as the representation of species with lowest rmax (slow-reproducing) decreased. The best explanatory factor for a market's GDI was anthropogenic pressure-road density, human settlements with >3000 inhabitants, and nonforest vegetation. High and low GDI were significantly differentiated by human density and human settlements with >3000 inhabitants. Our results provided empirical evidence that human activity is correlated with more depleted bushmeat faunas and can be used as a proxy to determine areas in need of conservation action. © 2015 Society for Conservation Biology.

Landscape composition and habitat area affects butterfly species richness in semi-natural grasslands.

PubMed

Ockinger, Erik; Smith, Henrik G

2006-09-01

During the last 50 years, the distribution and abundance of many European butterfly species associated with semi-natural grasslands have declined. This may be the result of deteriorating habitat quality, but habitat loss, resulting in decreasing area and increasing isolation of remaining habitat, is also predicted to result in reduced species richness. To investigate the effects of habitat loss on species richness, we surveyed butterflies in semi-natural grasslands of similar quality and structure, but situated in landscapes of different habitat composition. Using spatially explicit habitat data, we selected one large (6-10 ha) and one small (0.5-2 ha) grassland site (pasture) in each of 24 non-overlapping 28.2 km(2) landscapes belonging to three categories differing in the proportion of the area that consisted of semi-natural grasslands. After controlling for local habitat quality, species richness was higher in grassland sites situated in landscapes consisting of a high proportion of grasslands. Species richness was also higher in larger grassland sites, and this effect was more pronounced for sedentary than for mobile species. However, the number of species for a given area did not differ between large and small grasslands. There was also a significant relationship between butterfly species richness and habitat quality in the form of vegetation height and abundance of flowers. In contrast, butterfly density was not related to landscape composition or grassland size. When species respond differently to habitat area or landscape composition this leads to effects on community structure, and nestedness analysis showed that depauperate communities were subsets of richer ones. Both grassland area and landscape composition may have contributed to this pattern, implying that small habitat fragments and landscapes with low proportions of habitat are both likely to mainly contain common generalist species. Based on these results, conservation efforts should aim at preserving landscapes with high proportions of the focal habitat.

Markedly Divergent Tree Assemblage Responses to Tropical Forest Loss and Fragmentation across a Strong Seasonality Gradient.

PubMed

Orihuela, Rodrigo L L; Peres, Carlos A; Mendes, Gabriel; Jarenkow, João A; Tabarelli, Marcelo

2015-01-01

We examine the effects of forest fragmentation on the structure and composition of tree assemblages within three seasonal and aseasonal forest types of southern Brazil, including evergreen, Araucaria, and deciduous forests. We sampled three southernmost Atlantic Forest landscapes, including the largest continuous forest protected areas within each forest type. Tree assemblages in each forest type were sampled within 10 plots of 0.1 ha in both continuous forests and 10 adjacent forest fragments. All trees within each plot were assigned to trait categories describing their regeneration strategy, vertical stratification, seed-dispersal mode, seed size, and wood density. We detected differences among both forest types and landscape contexts in terms of overall tree species richness, and the density and species richness of different functional groups in terms of regeneration strategy, seed dispersal mode and woody density. Overall, evergreen forest fragments exhibited the largest deviations from continuous forest plots in assemblage structure. Evergreen, Araucaria and deciduous forests diverge in the functional composition of tree floras, particularly in relation to regeneration strategy and stress tolerance. By supporting a more diversified light-demanding and stress-tolerant flora with reduced richness and abundance of shade-tolerant, old-growth species, both deciduous and Araucaria forest tree assemblages are more intrinsically resilient to contemporary human-disturbances, including fragmentation-induced edge effects, in terms of species erosion and functional shifts. We suggest that these intrinsic differences in the direction and magnitude of responses to changes in landscape structure between forest types should guide a wide range of conservation strategies in restoring fragmented tropical forest landscapes worldwide.

Markedly Divergent Tree Assemblage Responses to Tropical Forest Loss and Fragmentation across a Strong Seasonality Gradient

PubMed Central

Orihuela, Rodrigo L. L.; Peres, Carlos A.; Mendes, Gabriel; Jarenkow, João A.; Tabarelli, Marcelo

2015-01-01

We examine the effects of forest fragmentation on the structure and composition of tree assemblages within three seasonal and aseasonal forest types of southern Brazil, including evergreen, Araucaria, and deciduous forests. We sampled three southernmost Atlantic Forest landscapes, including the largest continuous forest protected areas within each forest type. Tree assemblages in each forest type were sampled within 10 plots of 0.1 ha in both continuous forests and 10 adjacent forest fragments. All trees within each plot were assigned to trait categories describing their regeneration strategy, vertical stratification, seed-dispersal mode, seed size, and wood density. We detected differences among both forest types and landscape contexts in terms of overall tree species richness, and the density and species richness of different functional groups in terms of regeneration strategy, seed dispersal mode and woody density. Overall, evergreen forest fragments exhibited the largest deviations from continuous forest plots in assemblage structure. Evergreen, Araucaria and deciduous forests diverge in the functional composition of tree floras, particularly in relation to regeneration strategy and stress tolerance. By supporting a more diversified light-demanding and stress-tolerant flora with reduced richness and abundance of shade-tolerant, old-growth species, both deciduous and Araucaria forest tree assemblages are more intrinsically resilient to contemporary human-disturbances, including fragmentation-induced edge effects, in terms of species erosion and functional shifts. We suggest that these intrinsic differences in the direction and magnitude of responses to changes in landscape structure between forest types should guide a wide range of conservation strategies in restoring fragmented tropical forest landscapes worldwide. PMID:26309252

Wildfire and drought dynamics destabilize carbon stores of fire-suppressed forests.

PubMed

Earles, J Mason; North, Malcolm P; Hurteau, Matthew D

2014-06-01

Widespread fire suppression and thinning have altered the structure and composition of many forests in the western United States, making them more susceptible to the synergy of large-scale drought and fire events. We examine how these changes affect carbon storage and stability compared to historic fire-adapted conditions. We modeled carbon dynamics under possible drought and fire conditions over a 300-year simulation period in two mixed-conifer conditions common in the western United States: (1) pine-dominated with an active fire regime and (2) fir-dominated, fire suppressed forests. Fir-dominated stands, with higher live- and dead-wood density, had much lower carbon stability as drought and fire frequency increased compared to pine-dominated forest. Carbon instability resulted from species (i.e., fir's greater susceptibility to drought and fire) and stand (i.e., high density of smaller trees) conditions that develop in the absence of active management. Our modeling suggests restoring historic species composition and active fire regimes can significantly increase carbon stability in fire-suppressed, mixed-conifer forests. Long-term management of forest carbon should consider the relative resilience of stand structure and composition to possible increases in disturbance frequency and intensity under changing climate.

Resilience of Invaded Riparian Landscapes: The Potential Role of Soil-Stored Seed Banks

NASA Astrophysics Data System (ADS)

Tererai, Farai; Gaertner, Mirijam; Jacobs, Shayne M.; Richardson, David M.

2015-01-01

We investigated the potential role of soil-stored seed banks in driving vegetation recovery under varying intensities of invasion by the alien tree Eucalyptus camaldulensis along the Berg River in South Africa's Western Cape Province. We asked: How do richness, diversity, and composition of soil-stored seed banks vary with invasion intensity? What is the difference between the seed banks and above-ground vegetation with respect to species richness, diversity, composition, and structure? To what extent do soil-stored seed banks provide reliable sources for restoring native plant communities? Through a seedling-emergence approach, we compared seedling density, richness, and diversity in plots under varying Eucalyptus cover. Seed bank characteristics were also compared with those of the above-ground vegetation. Except in terms of diversity and density, the richness and composition of native species varied significantly among invasion conditions. Despite the paucity of native tree and shrub species in the seed bank, it was more diverse than extant vegetation. Some species occurred exclusively either in the seed bank or in the above-ground vegetation. Although this ecosystem has been degraded by several agents, including Eucalyptus invasion, soil-stored seed banks still offer modest potential for driving regeneration of native plant communities, but secondary invasions need to be managed carefully. Remnant populations of native plants in the above-ground vegetation remaining after E. camaldulensis clearing provide a more promising propagule source for rapid regeneration. Further work is needed to elucidate possible effects of invasion on successional pathways following E. camaldulensis removal and the effects of hydrochory on seed bank dynamics.

Tropical Secondary Forest Management Influences Frugivorous Bat Composition, Abundance and Fruit Consumption in Chiapas, Mexico

PubMed Central

Vleut, Ivar; Levy-Tacher, Samuel Israel; de Boer, Willem Frederik; Galindo-González, Jorge; Vazquez, Luis-Bernardo

2013-01-01

Most studies on frugivorous bat assemblages in secondary forests have concentrated on differences among successional stages, and have disregarded the effect of forest management. Secondary forest management practices alter the vegetation structure and fruit availability, important factors associated with differences in frugivorous bat assemblage structure, and fruit consumption and can therefore modify forest succession. Our objective was to elucidate factors (forest structural variables and fruit availability) determining bat diversity, abundance, composition and species-specific abundance of bats in (i) secondary forests managed by Lacandon farmers dominated by Ochroma pyramidale, in (ii) secondary forests without management, and in (iii) mature rain forests in Chiapas, Southern Mexico. Frugivorous bat species diversity (Shannon H’) was similar between forest types. However, bat abundance was highest in rain forest and O. pyramidale forests. Bat species composition was different among forest types with more Carollia sowelli and Sturnira lilium captures in O. pyramidale forests. Overall, bat fruit consumption was dominated by early-successional shrubs, highest late-successional fruit consumption was found in rain forests and more bats consumed early-successional shrub fruits in O. pyramidale forests. Ochroma pyramidale forests presented a higher canopy openness, tree height, lower tree density and diversity of fruit than secondary forests. Tree density and canopy openness were negatively correlated with bat species diversity and bat abundance, but bat abundance increased with fruit abundance and tree height. Hence, secondary forest management alters forests’ structural characteristics and resource availability, and shapes the frugivorous bat community structure, and thereby the fruit consumption by bats. PMID:24147029

Tropical secondary forest management influences frugivorous bat composition, abundance and fruit consumption in Chiapas, Mexico.

PubMed

Vleut, Ivar; Levy-Tacher, Samuel Israel; de Boer, Willem Frederik; Galindo-González, Jorge; Vazquez, Luis-Bernardo

2013-01-01

Most studies on frugivorous bat assemblages in secondary forests have concentrated on differences among successional stages, and have disregarded the effect of forest management. Secondary forest management practices alter the vegetation structure and fruit availability, important factors associated with differences in frugivorous bat assemblage structure, and fruit consumption and can therefore modify forest succession. Our objective was to elucidate factors (forest structural variables and fruit availability) determining bat diversity, abundance, composition and species-specific abundance of bats in (i) secondary forests managed by Lacandon farmers dominated by Ochroma pyramidale, in (ii) secondary forests without management, and in (iii) mature rain forests in Chiapas, Southern Mexico. Frugivorous bat species diversity (Shannon H') was similar between forest types. However, bat abundance was highest in rain forest and O. pyramidale forests. Bat species composition was different among forest types with more Carollia sowelli and Sturnira lilium captures in O. pyramidale forests. Overall, bat fruit consumption was dominated by early-successional shrubs, highest late-successional fruit consumption was found in rain forests and more bats consumed early-successional shrub fruits in O. pyramidale forests. Ochroma pyramidale forests presented a higher canopy openness, tree height, lower tree density and diversity of fruit than secondary forests. Tree density and canopy openness were negatively correlated with bat species diversity and bat abundance, but bat abundance increased with fruit abundance and tree height. Hence, secondary forest management alters forests' structural characteristics and resource availability, and shapes the frugivorous bat community structure, and thereby the fruit consumption by bats.

[Effect of landscape change on the structure of the sting-less bee community (Hymenoptera: Apidae) in Meta, Colombia].

PubMed

Nates-Parra, Guiomar; Palacios, Eliana; Parra-H, Alejandro

2008-09-01

Stingless bees represent one of the most diversified components of the natural Apoidea fauna of pollinators in the tropics. They use diverse kinds of substrates and inhabit varied habitats. Some species are typical for some natural either artificial place. The landscape alteration were this group of bees nests, has and important impact on the natural composition of its community structure, fact which is reflected in the nest density. We analyzed the structure composition of the stingless bees' community in three environments in the Colombian Ilanos piedmont, an important region that represents the transition between Andean ecosystems and a savannah that is seriously threatened by cattle practices. We made systematic samples in secondary forest, agro-ecosystems and urban areas, recording the presence of 204 nests from 11 genera (24 species). The nest density per landscape was heterogeneous and never higher than 16 nests/Ha. We observed two nesting patterns and an effect of sampling criterion on the measured biodiversity.

Effects of CO[sub 2] and climate change on forest trees: Soil biology and enzymology

DOE Office of Scientific and Technical Information (OSTI.GOV)

Moldenke, A.R.; Baumeister, N.; Caldwell, B.A.

1994-06-01

Samples of Teracosm soils were analyzed shortly after initial setup to determine whether initial conditions were equivalent and matched expected values for local soils. Total and active fungal biomass, active bacterial biomass and protozoan numbers were reduced, with greatest decreases occurring in the A horizon. No effect was observed on total bacterial biomass, nematode or anthropod densities, but changes in nematode and arthropod species composition occurred. Significant differences in total density and species composition occurred between the enclosed Teracosms and the open controls. Arthropod and nematode community structure in the three altitudinal field sites had significantly diverged. No significant differencesmore » in activities of key soil enzymes in C- and N-cycling (acid phosphatase, protease, B-glucosidase, phenol oxidase and peroxidase) were found between initial samples relative to treatment, but all levels were significantly difference relative to depth in soil profile. Activities were within ranges previously observed in forests of the Pacific Northwest.« less

Stiff and tough: a comparative study on the tensile properties of shark skin.

PubMed

Creager, Shelby B; Porter, Marianne E

2018-02-01

In sharks, the skin is a biological composite with mineralized denticles embedded within a collagenous matrix. Swimming performance is enhanced by the dermal denticles on the skin, which have drag reducing properties produced by regional morphological variations and changes in density along the body. We used mechanical testing to quantify the effect of embedded mineralized denticles on the quasi-static tensile properties of shark skin to failure in four coastal species. We investigated regional differences in denticle density and skin properties by dissecting skin from the underlying fascia and muscle at 10 anatomical landmarks. Hourglass-shaped skin samples were extracted in the cranial to caudal orientation. Denticle density was quantified and varied significantly among both regions and species. We observed the greatest denticle densities in the cranial region of the body for the bonnethead, scalloped hammerhead, and bull sharks. Skin samples were then tested in tension until failure, stress strain curves were generated, and mechanical properties calculated. We found significant species and region effects for all three tensile mechanical properties. We report the greatest ultimate tensile strength, stiffness, and toughness near the cranial and lateral regions of the body for all 4 of the coastal species. We also report that denticle density increases with skin stiffness but decreases with toughness. Copyright © 2017 Elsevier GmbH. All rights reserved.

Composition of fish communities in relation to stream acidification and habitat in the Neversink River, New York

USGS Publications Warehouse

Baldigo, Barry P.; Lawrence, G.B.

2000-01-01

The effects of acidification in lotic systems are not well documented. Spatial and temporal variability of habitat and water quality complicate the evaluation of acidification effects in streams and river. The Neversink River in the Catskill Mountains of southeastern New York, the tributaries of which vary from well buffered to severely acidified, provided an opportunity to investigate the external and magnitude of acidification effects on fish communities of headwater systems. Composition of fish communities, water quality, stream hydrology, stream habitat, and physiographic factors were characterized from 1991 to 1995 at 16 first- to fourth-order sites in the basin. Correlation and regression analyses were used to develop empirical models and to assess the relations among fish species richness, total fish density, and total biomass and environmental variables. Chronic and episodic acidification and elevated concentrations of inorganic monomeric aluminum were common, and fish populations were rare or absent from several sites in the upper reaches of the basin; as many as six fish species were collected from sites in the lower reaches of the basin. Species distribution and species richness were most highly related to stream pH, acid-neutralizing capacity (ANC), inorganic monomeric aluminum (Al(im)), calcium (Ca)2+, and potassium (K)+ concentrations, site elevation, watershed drainage area, and water temperature. Fish density was most highly related to stream pH, Al(im), ANC, K+, Ca2+, and magnesium (Mg)2+ concentrations. Fish biomass, unlike species richness and fish density, was most highly related to physical habitat characteristics, water temperature, and concentrations of Mg2+ and silicon. Acidity characteristics were of secondary importance to fish biomass at all but the most severely acidified sites. Our results indicate that (1) the total biomass of fish communities was not seriously affected at moderately to strongly acidified sites; (2) species richness and total density of fish were adversely affected at strongly to severely acidified sites; and (3) possible changes in competitive interactions may mitigate negative effects of acidification on fish communities in parts of the Neversink River Basin.

Phenology and population dynamics of sand flies in a new focus of visceral leishmaniasis in Eastern Azarbaijan Province, North western of Iran.

PubMed

Hazratian, Teimour; Rassi, Yavar; Oshaghi, Mohammad Ali; Yaghoobi-Ershadi, Mohammad Reza; Fallah, Esmael; Shirzadi, Mohammad Reza; Rafizadeh, Sina

2011-08-01

To investigate species composition, density, accumulated degree-day and diversity of sand flies during April to October 2010 in Azarshahr district, a new focus of visceral leishmaniasis in north western Iran. Sand flies were collected using sticky traps biweekly and were stored in 96% ethanol. All specimens were mounted in Puri's medium for species identification using valid keys of sandflies. The density was calculated by the formula: number of specimens/m(2) of sticky traps and number of specimens/number of traps. Degree-day was calculated as follows: (Maximum temperature + Minimum temperature)/2-Minimum threshold. Diversity indices of the collected sand flies within different villages were estimated by the Shannon-weaver formula ( H'=∑i=1sPilog(e)Pi). Totally 5 557 specimens comprising 16 Species (14 Phlebotomus, and 2 Sergentomyia) were indentified. The activity of the species extended from April to October. Common sand-flies in resting places were Phlebotomus papatasi, Phlebotomus sergenti and Phlebotomus mongolensis. The monthly average density was 37.6, 41.1, 40.23, 30.38 and 30.67 for Almalodash, Jaragil, Segaiesh, Amirdizaj and Germezgol villages, respectively. Accumulated degree-day from early January to late May was approximately 289 degree days. The minimum threshold temperature for calculating of accumulated degree-day was 17.32°. According on the Shannon-weaver (H'), diversity of sand flies within area study were estimated as 0.917, 1.867, 1.339, 1.673, and 1.562 in Almalodash, Jaragil, Segaiesh, Amirdizaj and Germezgol villages, respectively. This study is the first detailed research in terms of species composition, density, accumulated degree-day and diversity of sand flies in an endemic focus of visceral leishamaniasis in Azarshahr district. The population dynamics of sand flies in Azarshahr district were greatly affected by climatic factors. According to this study the highest activity of the collected sand fly species occurs at the teritary week of August. It could help health authorities to predicate period of maximum risk of visceral leishamaniasis transmission and implement control program. Copyright © 2011 Hainan Medical College. Published by Elsevier B.V. All rights reserved.

HPLC pigment profiles of 31 harmful algal bloom species isolated from the coastal sea areas of China

NASA Astrophysics Data System (ADS)

Liu, Shuxia; Yao, Peng; Yu, Zhigang; Li, Dong; Deng, Chunmei; Zhen, Yu

2014-12-01

Chemotaxonomy based on diagnostic pigments is now a routine tool for macroscopic determination of the composition and abundance of phytoplankton in various aquatic environments. Since the taxonomic capability of this method depends on the relationships between diagnostic pigments and chlorophyll a of classified groups, it is critical to calibrate it by using pigment relationships obtained from representative and/or dominant species local to targeted investigation area. In this study, pigment profiles of 31 harmful algal bloom (HAB) species isolated from the coastal sea areas of China were analyzed with high performance liquid chromatography (HPLC). Pigment compositions, cellular pigment densities and ratios of pigments to chlorophyll a were determined and calculated. Among all these species, 25 kinds of pigments were detected, of which fucoxanthin, peridinin, 19'-butanoyloxyfucoxanthin, 19'-hexanoyloxyfucoxanthin, violaxanthin, and antheraxanthin were diagnostic pigments. Cellular pigment density was basically independent of species and environmental conditions, and therefore was recommended as a bridge to compare the results of HPLC-CHEMTAX technique with the traditional microscopy method. Pigment ratios of algal species isolated from the coast of China, especially the diagnostic pigment ratios, were higher than those from other locations. According to these results, pigment ratio ranges of four classes of phytoplankton common off the coast of China were summarized for using in the current chemotaxonomic method. Moreover, the differences of pigments ratios among different species under the same culturing conditions were consistent with their biological differences. Such differences have the potential to be used to classify the phytoplankton below class, which is meaningful for monitoring HABs by HPLC-CHEMTAX.

Solar Energetic Particle Composition over Two Solar Cycles as Observed by the Ulysses/HISCALE and ACE/EPAM Pulse Height Analyzers.

NASA Astrophysics Data System (ADS)

Patterson, J. D.; Madanian, H.; Manweiler, J. W.; Lanzerotti, L. J.

2017-12-01

We present the compositional variation in the Solar Energetic Particle (SEP) population in the inner heliosphere over two solar cycles using data from the Ulysses Heliospheric Instrument for Spectra, Composition, and Anisotropy at Low Energies (HISCALE) and Advanced Composition Explorer (ACE) Electron Proton Alpha Monitor (EPAM). The Ulysses mission was active from late 1990 to mid-2009 in a heliopolar orbit inclined by 80° with a perihelion of 1.3 AU and an aphelion of 5.4 AU. The ACE mission has been active since its launch in late 1997 and is in a halo orbit about L1. These two missions provide a total of 27 years of continuous observation in the inner heliosphere with twelve years of simultaneous observation. HISCALE and EPAM data provide species-resolved differential flux and density of SEP between 0.5-5 MeV/nuc. Several ion species (He, C, O, Ne, Si, Fe) are identified using the Pulse Height Analyzer (PHA) system of the Composition Aperture for both instruments. The He density shows a noticeable increase at high solar activity followed by a moderate drop at the quiet time of the solar minimum between cycles 23 and 24. The density of heavier ions (i.e. O and Fe) change minimally with respect to the F10.7 index variations however, certain energy-specific count rates decrease during solar minimum. With Ulysses and ACE observing in different regions of the inner heliosphere, there are significant latitudinal differences in how the O/He ratios vary with the solar cycle. At solar minimum, there is reasonable agreement between the observations from both instruments. At solar max 23, the differences in composition over the course of the solar cycle, and as observed at different heliospheric locations can provide insight to the origins of and acceleration processes differentially affecting solar energetic ions.

Forest regeneration composition and development in upland, mixed-oak forests.

PubMed

Fei, Songlin; Gould, Peter J; Steiner, Kim C; Finley, James C; McDill, Marc E

2005-12-01

Advance regeneration in 52 mature mixed-oak stands was analyzed and described. Red maple (Acer rubrum L.) was the most abundant species in the study area. Among oak (Quercus) species, northern red oak (Q. rubra L.) was the most abundant within the Allegheny Plateau physiographic province, whereas chestnut oak (Q. montana L.) was the most abundant within the Ridge and Valley physiographic province. Sixteen stands, for which data are available through the fourth growing season following harvest, were used to describe stand development. Cumulative height, a composite measure of size and density, was used to describe early stand development. Black gum (Nyssa sylvatica Marsh.) and black birch (Betula lenta L.) had dramatic increases in stand density and cumulative height after overstory removal. Cumulative height of northern red oak and chestnut oak showed a faster positive response to overstory removal than red maple. Oak retained its dominance in cumulative height for at least 4 years after harvest. Red maple nevertheless remained the most abundant tree species after overstory removal. Our results suggest that the principal advantage of red maple regeneration is its ability to accumulate in large numbers prior to harvest.

Seed rain and seed bank of third- and fifth-order streams on the western slope of the Cascade Range.

Treesearch

Janice M. Harmon; Jerry F. Franklin

1991-01-01

We compared the composition and density of the on-site vegetation, seed bank, and seed rain of three geomorphic and successional surfaces along third- and fifth-order streams on the western slope of the central Cascade Range in Oregon.The on-site vegetation generally was dominated by tree species, the seed bank by herb species, and the seed rain by tree and...

Tree species distribution and forest structure along environmental gradients in the dwarf forest of the Luquillo Mountains of Puerto Rico

Treesearch

Peter L. Weaver

2010-01-01

Eleven groups of three plots stratified by aspect (windward vs. leeward) and topography (ridge, slope, and ravine) and varying in elevation from 880 to about 1,000 metres were used to sample forest structure and species composition within the dwarf forest of the Luquillo Mountains of Puerto Rico. Stem density to windward was significantly greater on slopes, andf or all...

Changes in Structure and Functioning of Protist (Testate Amoebae) Communities Due to Conversion of Lowland Rainforest into Rubber and Oil Palm Plantations

PubMed Central

Krashevska, Valentyna; Klarner, Bernhard; Widyastuti, Rahayu; Maraun, Mark; Scheu, Stefan

2016-01-01

Large areas of tropical rainforest are being converted to agricultural and plantation land uses, but little is known of biodiversity and ecological functioning under these replacement land uses. We investigated the effects of conversion of rainforest into jungle rubber, intensive rubber and oil palm plantations on testate amoebae, diverse and functionally important protists in litter and soil. Living testate amoebae species richness, density and biomass were all lower in replacement land uses than in rainforest, with the impact being more pronounced in litter than in soil. Similar abundances of species of high and low trophic level in rainforest suggest that trophic interactions are more balanced, with a high number of functionally redundant species, than in rubber and oil palm. In contrast, plantations had a low density of high trophic level species indicating losses of functions. This was particularly so in oil palm plantations. In addition, the relative density of species with siliceous shells was >50% lower in the litter layer of oil palm and rubber compared to rainforest and jungle rubber. This difference suggests that rainforest conversion changes biogenic silicon pools and increases silicon losses. Overall, the lower species richness, density and biomass in plantations than in rainforest, and the changes in the functional composition of the testate amoebae community, indicate detrimental effects of rainforest conversion on the structure and functioning of microbial food webs. PMID:27463805

Cytophotometric and biochemical analyses of DNA in pentaploid and diploid Agave species.

PubMed

Cavallini, A; Natali, L; Cionini, G; Castorena-Sanchez, I

1996-04-01

Nuclear DNA content, chromatin structure, and DNA composition were investigated in four Agave species: two diploid, Agave tequilana Weber and Agave angustifolia Haworth var. marginata Hort., and two pentaploid, Agave fourcroydes Lemaire and Agave sisalana Perrine. It was determined that the genome size of pentaploid species is nearly 2.5 times that of diploid ones. Cytophotometric analyses of chromatin structure were performed following Feulgen or DAPI staining to determine optical density profiles of interphase nuclei. Pentaploid species showed higher frequencies of condensed chromatin (heterochromatin) than diploid species. On the other hand, a lower frequency of A-T rich (DAPI stained) heterochromatin was found in pentaploid species than in diploid ones, indicating that heterochromatin in pentaploid species is made up of sequences with base compositions different from those of diploid species. Since thermal denaturation profiles of extracted DNA showed minor variations in the base composition of the genomes of the four species, it is supposed that, in pentaploid species, the large heterochromatin content is not due to an overrepresentation of G-C repetitive sequences but rather to the condensation of nonrepetitive sequences, such as, for example, redundant gene copies switched off in the polyploid complement. It is suggested that speciation in the genus Agave occurs through point mutations and minor DNA rearrangements, as is also indicated by the relative stability of the karyotype of this genus. Key words : Agave, DNA cytophotometry, DNA melting profiles, chromatin structure, genome size.

A Pine Is a Pine and a Spruce Is a Spruce--The Effect of Tree Species and Stand Age on Epiphytic Lichen Communities.

PubMed

Bäcklund, Sofia; Jönsson, Mari; Strengbom, Joachim; Frisch, Andreas; Thor, Göran

2016-01-01

With an increasing demand for forest-based products, there is a growing interest in introducing fast-growing non-native tree species in forest management. Such introductions often have unknown consequences for native forest biodiversity. In this study, we examine epiphytic lichen species richness and species composition on the trunks of non-native Pinus contorta and compare these to the native Pinus sylvestris and Picea abies in managed boreal forests in northern Sweden across a chronosequence of age classes. Overall, we recorded a total of 66,209 lichen occurrences belonging to 57 species in the 96 studied forest stands. We found no difference in species richness of lichens between stands of P. contorta and P. sylvestris, but stands of P. abies had higher total species richness. However, species richness of lichens in stands of P. abies decreased with increasing stand age, while no such age effect was detected for P. contorta and P. sylvestris. Lichen species composition progressively diverged with increasing stand age, and in 30-year-old stands all three tree species showed species-specific assemblages. Epiphytic lichen assemblages in stands of 30-year-old P. contorta were influenced by greater basal area, canopy closure, and average diameter at breast height, P. abies stands by higher branch density and canopy closure, and stands of P. sylvestris by greater bark crevice depth. Differences in lichen species richness and composition were mainly explained by canopy closure and habitat availability, and the greater canopy closure in mature P. abies stands promoted the colonization and growth of calicioid lichen species. Our results indicate that the non-native P. contorta have similar species richness as the native P. sylvestris. The main difference in lichen species richness and composition is between P. abies and Pinus spp. in managed forests of boreal Sweden.

A Pine Is a Pine and a Spruce Is a Spruce – The Effect of Tree Species and Stand Age on Epiphytic Lichen Communities

PubMed Central

Bäcklund, Sofia; Jönsson, Mari; Strengbom, Joachim; Frisch, Andreas; Thor, Göran

2016-01-01

With an increasing demand for forest-based products, there is a growing interest in introducing fast-growing non-native tree species in forest management. Such introductions often have unknown consequences for native forest biodiversity. In this study, we examine epiphytic lichen species richness and species composition on the trunks of non-native Pinus contorta and compare these to the native Pinus sylvestris and Picea abies in managed boreal forests in northern Sweden across a chronosequence of age classes. Overall, we recorded a total of 66,209 lichen occurrences belonging to 57 species in the 96 studied forest stands. We found no difference in species richness of lichens between stands of P. contorta and P. sylvestris, but stands of P. abies had higher total species richness. However, species richness of lichens in stands of P. abies decreased with increasing stand age, while no such age effect was detected for P. contorta and P. sylvestris. Lichen species composition progressively diverged with increasing stand age, and in 30-year-old stands all three tree species showed species-specific assemblages. Epiphytic lichen assemblages in stands of 30-year-old P. contorta were influenced by greater basal area, canopy closure, and average diameter at breast height, P. abies stands by higher branch density and canopy closure, and stands of P. sylvestris by greater bark crevice depth. Differences in lichen species richness and composition were mainly explained by canopy closure and habitat availability, and the greater canopy closure in mature P. abies stands promoted the colonization and growth of calicioid lichen species. Our results indicate that the non-native P. contorta have similar species richness as the native P. sylvestris. The main difference in lichen species richness and composition is between P. abies and Pinus spp. in managed forests of boreal Sweden. PMID:26799558

Deoxyribonucleic acid base compositions of dermatophytes.

PubMed

Davison, F D; Mackenzie, D W; Owen, R J

1980-06-01

DNA was extracted and purified from 55 dermatophyte isolates representing 34 species of Trichophyton, Microsporum and Epidermophyton. The base compositions of the chromosomal DNA were determined by CsCl density gradient centrifugation and were found to be in the narrow range of 48.7 to 50.3 mol % G + C. A satellite DNA component assumed to be of mitochondrial origin was present in most strains, with a G + C content ranging from 14.7 to 30.8 mol % G + C. Heterogeneity in microscopic and colonial characteristics was not reflected in differences in the mean G + C content of the chromosomal DNAs. Strains varied in the G + C contents of satelite DNA, but these did not correlate with traditional species concepts.

The effect of exotic grass Urochloa decumbens (Stapf) R.D.Webster (Poaceae) in the reduction of species richness and change of floristic composition of natural regeneration in the Floresta Nacional de Carajás, Brazil.

PubMed

Ferreira, Leandro V; Parolin, Pia; Matos, Darley C L; Cunha, Denise A; Chaves, Priscilla P; Neckel, Selvino O

2016-01-01

The introduction of exotic species is considered as one of the major causes of biodiversity loss. The National Forest of Carajás is one of the largest mineral provinces in the world. Mining activities caused changes of the natural habitats, leaving degraded areas after the mineral exploitation. One of the mining areas within FLONA Carajás was used for the extraction of gold. In the process of exploitation, a huge depression was formed by the removal of soil which was mounded up nearby. To prevent soil erosion of these mounds, an exotic grass, Urochloa decumbens (Stapf) R.D.Webster (Poaceae) was planted. The objective of this study was to compare the impact of this non-native grass on species richness and species composition of the natural regeneration in the degraded areas. Four areas were compared, two with and two without presence of U. decumbens. In each area, twenty four 1m²/plots were established. Species richness of the regeneration areas and population sizes were significantly lower in the plots where the exotic grass was present. Our study shows that U. decumbens had a negative effect on species richness and population density, and its presence changed the species composition and distribution of life forms of the natural regeneration.

Estimation of wood density and chemical composition by means of diffuse reflectance mid-infrared Fourier transform (DRIFT-MIR) spectroscopy.

PubMed

Nuopponen, Mari H; Birch, Gillian M; Sykes, Rob J; Lee, Steve J; Stewart, Derek

2006-01-11

Sitka spruce (Picea sitchensis) samples (491) from 50 different clones as well as 24 different tropical hardwoods and 20 Scots pine (Pinus sylvestris) samples were used to construct diffuse reflectance mid-infrared Fourier transform (DRIFT-MIR) based partial least squares (PLS) calibrations on lignin, cellulose, and wood resin contents and densities. Calibrations for density, lignin, and cellulose were established for all wood species combined into one data set as well as for the separate Sitka spruce data set. Relationships between wood resin and MIR data were constructed for the Sitka spruce data set as well as the combined Scots pine and Sitka spruce data sets. Calibrations containing only five wavenumbers instead of spectral ranges 4000-2800 and 1800-700 cm(-1) were also established. In addition, chemical factors contributing to wood density were studied. Chemical composition and density assessed from DRIFT-MIR calibrations had R2 and Q2 values in the ranges of 0.6-0.9 and 0.6-0.8, respectively. The PLS models gave residual mean squares error of prediction (RMSEP) values of 1.6-1.9, 2.8-3.7, and 0.4 for lignin, cellulose, and wood resin contents, respectively. Density test sets had RMSEP values ranging from 50 to 56. Reduced amount of wavenumbers can be utilized to predict the chemical composition and density of a wood, which should allow measurements of these properties using a hand-held device. MIR spectral data indicated that low-density samples had somewhat higher lignin contents than high-density samples. Correspondingly, high-density samples contained slightly more polysaccharides than low-density samples. This observation was consistent with the wet chemical data.

Top–down effects of a grazing, omnivorous minnow ( Campostoma anomalum) on stream microbial communities

DOE Office of Scientific and Technical Information (OSTI.GOV)

Veach, Allison M.; Troia, Matthew; Jumpponen, Ari

We report top–down control exerted by macroconsumers can strongly affect lower trophic levels and ecosystem processes. Studies of effects on primary consumers in streams have been focused on algae, and effects on bacteria are largely unknown. We manipulated the density of an omnivorous, grazing minnow, the central stoneroller (Campostoma anomalum), in experimental stream mesocosms (treatments with 0, 1, 2, 3, 4, 5, 6, or 7 individuals) to understand consumer effects on algal and bacterial abundance (chlorophyll a [Chl a] extraction, bacterial cell counts, biomass measurements) and bacterial diversity and community composition (via Illumina MiSeq sequencing of the V4 region ofmore » the 16S ribosomal RNA gene). Increasing C. anomalum density reduced algal biomass until density reached ~2 fish (5 g fish biomass/m 2), and higher fish densities did not affect algal biomass. Fish biomass did not affect bacterial cell counts. Biofilm organic matter decreased with increasing C. anomalum biomass. Bacterial community composition was not affected by fish biomass, but variation in community composition was correlated with shifts in bacterial abundances. Evenness of bacterial operational taxonomic units (OTUs) decreased with increasing C. anomalum biomass, indicating that bacterial communities exhibited a greater degree of OTU dominance when fish biomass was higher. These findings suggest that this grazing fish species reduces algal abundance and organic matter in low-nutrient streams until a threshold of moderate fish abundance is reached and that it reduces evenness of benthic bacterial communities but not bacterial biomass. Finally, given the importance of biofilm bacteria for ecosystem processes and the ubiquity of grazing fishes in streams, future researchers should explore both top–down and bottom–up interactions in alternative environmental contexts and with other grazing fish species.« less

Top–down effects of a grazing, omnivorous minnow ( Campostoma anomalum) on stream microbial communities

DOE PAGES

Veach, Allison M.; Troia, Matthew; Jumpponen, Ari; ...

2017-12-21

We report top–down control exerted by macroconsumers can strongly affect lower trophic levels and ecosystem processes. Studies of effects on primary consumers in streams have been focused on algae, and effects on bacteria are largely unknown. We manipulated the density of an omnivorous, grazing minnow, the central stoneroller (Campostoma anomalum), in experimental stream mesocosms (treatments with 0, 1, 2, 3, 4, 5, 6, or 7 individuals) to understand consumer effects on algal and bacterial abundance (chlorophyll a [Chl a] extraction, bacterial cell counts, biomass measurements) and bacterial diversity and community composition (via Illumina MiSeq sequencing of the V4 region ofmore » the 16S ribosomal RNA gene). Increasing C. anomalum density reduced algal biomass until density reached ~2 fish (5 g fish biomass/m 2), and higher fish densities did not affect algal biomass. Fish biomass did not affect bacterial cell counts. Biofilm organic matter decreased with increasing C. anomalum biomass. Bacterial community composition was not affected by fish biomass, but variation in community composition was correlated with shifts in bacterial abundances. Evenness of bacterial operational taxonomic units (OTUs) decreased with increasing C. anomalum biomass, indicating that bacterial communities exhibited a greater degree of OTU dominance when fish biomass was higher. These findings suggest that this grazing fish species reduces algal abundance and organic matter in low-nutrient streams until a threshold of moderate fish abundance is reached and that it reduces evenness of benthic bacterial communities but not bacterial biomass. Finally, given the importance of biofilm bacteria for ecosystem processes and the ubiquity of grazing fishes in streams, future researchers should explore both top–down and bottom–up interactions in alternative environmental contexts and with other grazing fish species.« less

Relationship between mid-water trawling effort and catch composition uncertainty in two large lakes (Huron and Michigan) dominated by alosines, osmerids, and coregonines

USGS Publications Warehouse

Warner, David M.; Claramunt, Randall M.; Schaeffer, Jeffrey S.; Yule, Daniel L.; Hrabik, Tom R.; Peintka, Bernie; Rudstam, Lars G.; Holuszko, Jeffrey D.; O'Brien, Timothy P.

2012-01-01

Because it is not possible to identify species with echosounders alone, trawling is widely used as a method for collecting species and size composition data for allocating acoustic fish density estimates to species or size groups. In the Laurentian Great Lakes, data from midwater trawls are commonly used for such allocations. However, there are no rules for how much midwater trawling effort is required to adequately describe species and size composition of the pelagic fish communities in these lakes, so the balance between acoustic sampling effort and trawling effort has been unguided. We used midwater trawl data collected between 1986 and 2008 in lakes Michigan and Huron and a variety of analytical techniques to develop guidance for appropriate levels of trawl effort. We used multivariate regression trees and re-sampling techniques to i. identify factors that influence species and size composition of the pelagic fish communities in these lakes, ii. identify stratification schemes for the two lakes, iii. determine if there was a relationship between uncertainty in catch composition and the number of tows made, and iv. predict the number of tows required to reach desired uncertainty targets. We found that depth occupied by fish below the surface was the most influential explanatory variable. Catch composition varied between lakes at depths <38.5 m below the surface, but not at depths ≥38.5 m below the surface. Year, latitude, and bottom depth influenced catch composition in the near-surface waters of Lake Michigan, while only year was important for Lake Huron surface waters. There was an inverse relationship between RSE [relative standard error = 100 × (SE/mean)] and the number of tows made for the proportions of the different size and species groups. We found for the fifth (Lake Huron) and sixth (Lake Michigan) largest lakes in the world, 15–35 tows were adequate to achieve target RSEs (15% and 30%) for ubiquitous species, but rarer species required much higher, and at times, impractical effort levels to reach these targets.

Malaria Vector Surveillance in Ganghwa-do, a Malaria-Endemic Area in the Republic of Korea

PubMed Central

Oh, Sung Suck; Hur, Myung Je; Joo, Gwang Sig; Kim, Sung Tae; Go, Jong Myoung; Kim, Yong Hee; Lee, Wook Gyo

2010-01-01

We investigated the seasonality of Anopheles mosquitoes, including its species composition, density, parity, and population densities of mosquitoes infected with the parasite in Ganghwa-do (Island), a vivax malaria endemic area in the Republic of Korea. Mosquitoes were collected periodically with a dry-ice-tent trap and a blacklight trap during the mosquito season (April-October) in 2008. Anopheles sinensis (94.9%) was the most abundant species collected, followed by Anopheles belenrae (3.8%), Anopheles pullus (1.2%), and Anopheles lesteri (0.1%). Hibernating Anopheles mosquitoes were also collected from December 2007 to March 2008. An. pullus (72.1%) was the most frequently collected, followed by An. sinensis (18.4%) and An. belenrae (9.5%). The composition of Anopheles species differed between the mosquito season and hibernation seasons. The parous rate fluctuated from 0% to 92.9%, and the highest rate was recorded on 10 September 2008. Sporozoite infections were detected by PCR in the head and thorax of female Anopheles mosquitoes. The annual sporozoite rate of mosquitoes was 0.11% (2 of 1,845 mosquitoes). The 2 mosquitoes that tested positive for sporozoites were An. sinensis. Malarial infections in anopheline mosquitoes from a population pool were also tried irrespective of the mosquito species. Nine of 2,331 pools of Anopheles mosquitoes were positive. From our study, it can be concluded that An. sinensis, which was the predominant vector species and confirmed as sporozoite-infected, plays an important role in malaria transmission in Ganghwa-do. PMID:20333283

Factors contributing to sugar maple decline along topographic gradients on the glaciated and unglaciated Allegheny Plateau

Treesearch

Stephen B. Horsley; Robert P. Long; Scott W. Bailey; Richard A. Hallett; Thomas J. Hall

1999-01-01

In the present study, we investigated the relationship between sugar maple health and 1) glacial history, 2) topographic or physiographic position, 3) site (elevation, aspect) and stand characteristics (species composition, structure, density), 4) disturbance history (management, defoliation), and foliar nutrition.

Stand development and silviculture in bottomland hardwoods

Treesearch

J. Steven Meadows

1993-01-01

Silviculture for the production of high-quality timber in southern bottomland hardwood forests involves the application of environmentally sound practices in order to enhance the growth and quality of both individual trees and stands. To accomplish this purpose, silvicultural practices are typically used to regulate stand density, species composition, and stem quality...

Computerized algorithms for partial cuts

Treesearch

R.L. Ernst; S.L. Stout

1991-01-01

Stand density, stand structure (diameter distribution), and species composition are all changed by intermediate treatments in forest stands. To use computer stand-growth simulators to assess the effects of different treatments on stand growth and development, users must be able to duplicate silviculturally realistic treatments in the simulator. In this paper, we review...

High endemism and stem density distinguish New Caledonian from other high-diversity rainforests in the Southwest Pacific.

PubMed

Ibanez, Thomas; Blanchard, E; Hequet, V; Keppel, G; Laidlaw, M; Pouteau, R; Vandrot, H; Birnbaum, P

2018-01-25

The biodiversity hotspot of New Caledonia is globally renowned for the diversity and endemism of its flora. New Caledonia's tropical rainforests have been reported to have higher stem densities, higher concentrations of relictual lineages and higher endemism than other rainforests. This study investigates whether these aspects differ in New Caledonian rainforests compared to other high-diversity rainforests in the Southwest Pacific. Plants (with a diameter at breast height ≥10 cm) were surveyed in nine 1-ha rainforest plots across the main island of New Caledonia and compared with 14 1-ha plots in high-diversity rainforests of the Southwest Pacific (in Australia, Fiji, Papua New Guinea and the Solomon Islands). This facilitated a comparison of stem densities, taxonomic composition and diversity, and species turnover among plots and countries. The study inventoried 11 280 stems belonging to 335 species (93 species ha-1 on average) in New Caledonia. In comparison with other rainforests in the Southwest Pacific, New Caledonian rainforests exhibited higher stem density (1253 stems ha-1 on average) including abundant palms and tree ferns, with the high abundance of the latter being unparalleled outside New Caledonia. In all plots, the density of relictual species was ≥10 % for both stems and species, with no discernible differences among countries. Species endemism, reaching 89 % on average, was significantly higher in New Caledonia. Overall, species turnover increased with geographical distance, but not among New Caledonian plots. High stem density, high endemism and a high abundance of tree ferns with stem diameters ≥10 cm are therefore unique characteristics of New Caledonian rainforests. High endemism and high spatial species turnover imply that the current system consisting of a few protected areas is inadequate, and that the spatial distribution of plant species needs to be considered to adequately protect the exceptional flora of New Caledonian rainforests. © The Author 2017. Published by Oxford University Press on behalf of the Annals of Botany Company. All rights reserved. For Permissions, please email: journals.permissions@oup.com

Seed dispersal into wetlands: Techniques and results for a restored tidal freshwater marsh

USGS Publications Warehouse

Neff, K.P.; Baldwin, A.H.

2005-01-01

Although seed dispersal is assumed to be a major factor determining plant community development in restored wetlands, little research exists on density and species richness of seed available through dispersal in these systems. We measured composition and seed dispersal rates at a restored tidal freshwater marsh in Washington, DC, USA by collecting seed dispersing through water and wind. Seed dispersal by water was measured using two methods of seed collection: (1) stationary traps composed of coconut fiber mat along an elevation gradient bracketing the tidal range and (2) a floating surface trawl net attached to a boat. To estimate wind dispersal rates, we collected seed from stationary traps composed of coconut fiber mat positioned above marsh vegetation. We also collected a small number of samples of debris deposited along high tide lines (drift lines) and feces of Canada Goose to explore their seed content. We used the seedling emergence method to determine seed density in all samples, which involved placing the fiber mats or sample material on top of potting soil in a greenhouse misting room and enumerating emerging seedlings. Seedlings from a total of 125 plant species emerged during this study (including 82 in river trawls, 89 in stationary water traps, 21 in drift lines, 39 in wind traps, and 10 in goose feces). The most abundant taxa included Bidens frondosa, Boehmeria cylindrica, Cyperus spp., Eclipta prostrata, and Ludwigia palustris. Total seedling density was significantly greater for the stationary water traps (212 + 30.6 seeds/m2/month) than the equal-sized stationary wind traps (18 + 6.0 seeds/m(2)/month). Lower-bound estimates of total species richness based on the non-parametric Chao 2 asymptotic estimators were greater for seeds in water (106 + 1.4 for stationary water traps and 104 + 5.5 for trawl samples) than for wind (54 + 6.4). Our results indicate that water is the primary source of seeds dispersing to the site and that a species-rich pool of dispersing propagules is present, an interesting result given the urbanized nature of the surrounding landscape. However, species composition of dispersing seeds differed from vegetation of restored and natural tidal freshwater marshes, indicating that planting is necessary for certain species. At other restoration sites, information on densities of dispersing seeds can support decisions on which species to plant.

Raptor community composition in the Texas Southern High Plains lesser prairie-chicken range

USGS Publications Warehouse

Behney, A.C.; Boal, Clint W.; Whitlaw, Heather A.; Lucia, D.R.

2012-01-01

Predation can be a factor in preventing prey population growth and sustainability when prey populations are small and fragmented, and when predator density is unrelated to the density of the single prey species. We conducted monthly raptor surveys from February 2007 to May 2009 in adjacent areas of the Texas Southern High Plains (USA) that do and do not support lesser prairie-chickens (Tympanuchus pallidicinctus), a candidate for protection under the Endangered Species Act. During the summer period corresponding to prairie-chicken nesting and brood-rearing, Swainson's hawks (Buteo swainsoni) were the most abundant raptor. During the lekking and overwintering period, the raptor community was diverse, with northern harriers (Circus cyaneus) being the most abundant species. Raptor abundance peaked during the early autumn and was lowest during the spring. Utility poles were a significant predictor of raptor density at survey points and Swainson's hawks and all raptors, pooled, were found in greater densities in non-prairie-chicken habitat dominated by mesquite (Prosopis glandulosa). Avian predation risk on prairie-chickens, based on presence and abundance of raptors, appears to be greatest during winter when there is a more abundant and diverse raptor community, and in areas with utility poles.

A general mixture theory. I. Mixtures of spherical molecules

NASA Astrophysics Data System (ADS)

Hamad, Esam Z.

1996-08-01

We present a new general theory for obtaining mixture properties from the pure species equations of state. The theory addresses the composition and the unlike interactions dependence of mixture equation of state. The density expansion of the mixture equation gives the exact composition dependence of all virial coefficients. The theory introduces multiple-index parameters that can be calculated from binary unlike interaction parameters. In this first part of the work, details are presented for the first and second levels of approximations for spherical molecules. The second order model is simple and very accurate. It predicts the compressibility factor of additive hard spheres within simulation uncertainty (equimolar with size ratio of three). For nonadditive hard spheres, comparison with compressibility factor simulation data over a wide range of density, composition, and nonadditivity parameter, gave an average error of 2%. For mixtures of Lennard-Jones molecules, the model predictions are better than the Weeks-Chandler-Anderson perturbation theory.

Manipulating sonic band gaps at will: vibrational density of states in three-dimensional acoustic metamaterial composites

NASA Astrophysics Data System (ADS)

Terao, Takamichi

2018-04-01

Vibrational properties of elastic composites containing a mass-in-mass microstructure embedded in a solid matrix are numerically studied. Using a lattice model, we investigate the vibrational density of states in three-dimensional composite structures where resonant particles are randomly dispersed. By dispersing such particles in the system, a sonic band gap appears. It is confirmed that this band gap can be introduced in a desired frequency regime by changing the parameters of resonant particles and the frequency width of this band gap can be controlled by varying the concentration of the resonant particles to be dispersed. In addition, multiple sonic band gaps can be realized using different species of resonant particles. These results enable us to suggest an alternative method to fabricate devices that can inhibit the propagation of elastic waves with specific frequencies using acoustic metamaterials.

Influence of Old World bluestem (Bothrichloa ischaemum) monocultures on breeding density of three grassland songbirds in Oklahoma

USGS Publications Warehouse

George, Andrew D.; O'Connell, Timothy J.; Hickman, Karen R.; Leslie, David M.

2009-01-01

Despite persistent and widespread declines of grassland birds in North America, few studies have assessed differences between native grasslands and seeded monocultures as songbird habitat. In the Great Plains, many fields enrolled in the Conservation Reserve Program have been seeded to Old World bluestems (OWB), but there is evidence to suggest that OWB may not provide suitable conditions for several grassland bird species. Our objectives were to investigate the influence of OWB monocultures on vegetation structure, composition, and breeding densities of three common grassland bird species. In 2007, we used distance sampling to survey breeding songbirds in 6 native mixed grass prairie and 6 OWB fields in Garfield, Grant, and Alfalfa counties, Oklahoma. Native mixed grass prairie supported taller and denser vegetation, as well as greater forb cover than OWB fields. Breeding density of Grasshopper Sparrow (Ammodramus savannarum) was higher in OWB monocultures, while density of Dickcissel (Spiza americana) and Eastern Meadowlark (Sturnella magna) was similar among field types.

Effects of water level on three wetlands soil seed banks on the Tibetan Plateau.

PubMed

Ma, Miaojun; Ma, Zhen; Du, Guozhen

2014-01-01

Although the effect of water level on germination in soil seed banks has been documented in many ecosystems, the mechanism is not fully understood, and to date no empirical studies on this subject exist. Further, no work has been done on the effect of water level on seed banks of drying and saline-alkaline wetlands in alpine areas on the Tibetan Plateau. We examined the effects of water level (0 cm, 5 cm and 10 cm) on seed germination and seedling establishment from soil seed banks at 0-5 cm and 5-10 cm depths in typical, drying, and saline-alkaline wetlands. We also explore the potential role of soil seed bank in restoration of drying and saline-alkaline wetlands. Species richness decreased with increase in water level, but there almost no change in seed density. A huge difference exists in species composition of the seed bank among different water levels in all three wetlands, especially between 0 cm and 5 cm and 0 cm and 10 cm. Similarity of species composition between seed bank and plant community was higher in 0 cm water level in drying wetland than in the other two wetlands. The similarity was much higher in 0 cm water level than in 5 cm and 10 cm water levels in all three wetlands. Species composition of the alpine wetland plant community changed significantly after drying and salinization, however, species composition of the seed bank was unchanged regardless of the environment change. Water level greatly affects seed bank recruitment and plant community establishment. Further, different water levels in restored habitats are likely to determine its species composition of the plant community. The seed bank is important in restoration of degraded wetlands. Successful restoration of drying and salinization wetlands could depend on the seed bank.

Biodiversity of oribatid mites (Acari: Oribatida) along an altitudinal gradient in the Central Alps.

PubMed

Fischer, Barbara M; Schatz, Heinrich

2013-01-01

Oribatid mite communities were studied in the Central Alps (Obergurgl, Tyrol, Austria). Samples were taken on four sites along an altitudinal gradient from 2050 m a.s.l to 2900 m a.s.l., in different vegetation units (pine forest, Nardetum, Caricetum, Androsacetum). A total of 86 species were found, most of them occurred only at one altitude, four species were found in all four study sites. Three taxa could not be ascribed to a certain species (Carabodes sp. Mycobates sp., Tectocepheus sp.). Species richness and density of oribatid mites decrease with increasing altitude. The results are compared with previous studies in the same region and show remarkable shifts in species composition.

[Species composition and spatial structure of plants in urban parks of Beijing].

PubMed

Zhao, Juan-Juan; Ouyang, Zhi-Yun; Zheng, Hua; Xu, Wei-Hua; Wang, Xiao-Ke

2009-02-01

By the method of stratified random sampling, the species composition and spatial structure of the plants in 53 parks in Beijing urban area were investigated, aimed to provide basic information for the protection of plant diversity in the parks and the management of the parks. A total of 492 plant species belong to 96 families and 283 genera were recorded. Based on the data of 21 investigation items about the trees, shrubs, and grasses in the study area and related statistical analyses, the plant structural patterns commonly seen in the green space of the parks of Beijing urban area were introduced. Among the plants in the parks, native species occupied 53.86% of the total. The chorological composition of the genera embraced broad kinds of geographical elements in China, and the predominance of dominant plants was remarkable. In most green patches of the parks, herbaceous species were more abundant and had higher coverage, shrubs had relatively low coverage and were less beneath tree canopy, and trees and shrubs had lower species richness and density. The canopy breadth and the diameter of breast height of trees as well as the breadth of shrubs and the heights of trees and shrubs were basically at the second grade, but the canopy structure of the trees were better, with good conditions of sunlight and growth. The crown missing of the shrubs was relatively low. It was suggested from correlation analyses and document survey of Beijing parks construction history that park landscape design, alien species introduction; and cultivation management were the main factors affecting the species composition and spatial structure of the plants in Beijing urban parks.

Diel variations in the assemblage structure and foraging ecology of larval and 0+ year juvenile fishes in a man-made floodplain waterbody.

PubMed

Tewson, L H; Cowx, I G; Nunn, A D

2016-04-01

This study investigated diel variations in zooplankton composition and abundance, and the species composition, density, size structure, feeding activity, diet composition and prey selection of larval and 0+ year juvenile fishes in the littoral of a man-made floodplain waterbody over five 24 h periods within a 57 day period. There was a significant difference in the species composition of diurnal and nocturnal catches, with most species consistently peaking in abundance either during daylight or at night, reflecting their main activity period. There were no consistent diel patterns in assemblage structure or the abundance of some species, however, most likely, respectively, due to the phenology of fish hatching and ontogenetic shifts in diel behaviour or habitat use. There were few clear diel patterns in the diet composition or prey selection of larval and 0+ year juvenile roach Rutilus rutilus and perch Perca fluviatilis, with most taxa consistently selected or avoided irrespective of the time of day or night, and no obvious shift between planktonic and benthic food sources, but dietary overlap suggested that interspecific interactions were probably strongest at night. It is essential that sampling programmes account for the diel ecology of the target species, as diurnal surveys alone could produce inaccurate assessments of resource use. The relative lack of consistent diel patterns in this study suggests that multiple 24 h surveys are required in late spring and early summer to provide accurate assessments of 0+ year fish assemblage structure and foraging ecology. © 2016 The Fisheries Society of the British Isles.

Vacancy-mediated fcc/bcc phase separation in Fe1 -xNix ultrathin films

NASA Astrophysics Data System (ADS)

Menteş, T. O.; Stojić, N.; Vescovo, E.; Ablett, J. M.; Niño, M. A.; Locatelli, A.

2016-08-01

The phase separation occurring in Fe-Ni thin films near the Invar composition is studied by using high-resolution spectromicroscopy techniques and density functional theory calculations. Annealed at temperatures around 300 ∘C ,Fe0.70Ni0.30 films on W(110) break into micron-sized bcc and fcc domains with compositions in agreement with the bulk Fe-Ni phase diagram. Ni is found to be the diffusing species in forming the chemical heterogeneity. The experimentally determined energy barrier of 1.59 ±0.09 eV is identified as the vacancy formation energy via density functional theory calculations. Thus, the principal role of the surface in the phase separation process is attributed to vacancy creation without interstitials.

[Effects of landscape and vegetation structure on the diversity of phyllostomid bats (Chiroptera: Phyllostomidae) in Oaxaca, Mexico].

PubMed

García-García, José Luis; Santos-Moreno, Antonio

2014-03-01

The tropical forest fragmentation is known to affect the spatial structure of the landscape and habitat. These alterations can modify the attributes of bat assemblages, however, this phenomenon has been little studied and understood. In this work we evaluated the structure of landscape (i.e. composition and configuration) and vegetation, and its relationship with assemblage- and population-level characteristics of phyllostomid bats in a tropical rainforest of Southeastern Mexico. For this, we previously selected 12 sites located in continuous and fragmented forests, where bats were captured using mist nets during a two years sampling effort (144 nights). Bats relative abundance, species richness (diversity of order 0, 0D), Shannon diversity index (1D) and Simpson index (2D) were evaluated in all sites, and their relationship with seven measures of landscape structure and seven measures of vegetation structure was described using a Hierarchical Partitioning Analysis. A total of 1 840 individuals of 29 species of phyllostomid bats were captured in this period. Differences in the assemblages were manifested only in the relative abundance and not in the richness of the species. The assemblages of fragmented forest exhibited greater variation in species composition and a greater abundance of frugivorous and nectarivorous bats in comparison with the assemblages of continuous forest. The landscape configuration was related to the assemblage- and population-level attributes, contrasting with previous studies where the composition was a key element. At habitat level, tree density and canopy cover determined the abundance of bats. Nectarivorous and frugivorous bats were mostly found in disturbed vegetation landscapes, primarily due to landscape configuration (e.g. edge density). This phenomenon could be a response to the availability of food in primary and intermediate successional stages, which are characterized by an abundance of food value.

Floral display size, conspecific density and florivory affect fruit set in natural populations of Phlox hirsuta, an endangered species

PubMed Central

Ruane, Lauren G.; Rotzin, Andrew T.; Congleton, Philip H.

2014-01-01

Background and Aims Natural variation in fruit and seed set may be explained by factors that affect the composition of pollen grains on stigmas. Self-incompatible species require compatible outcross pollen grains to produce seeds. The siring success of outcross pollen grains, however, can be hindered if self (or other incompatible) pollen grains co-occur on stigmas. This study identifies factors that determine fruit set in Phlox hirsuta, a self-sterile endangered species that is prone to self-pollination, and its associated fitness costs. Methods Multiple linear regressions were used to identify factors that explain variation in percentage fruit set within three of the five known populations of this endangered species. Florivorous beetle density, petal colour, floral display size, local conspecific density and pre-dispersal seed predation were quantified and their effects on the ability of flowers to produce fruits were assessed. Key Results In all three populations, percentage fruit set decreased as florivorous beetle density increased and as floral display size increased. The effect of floral display size on fruit set, however, often depended on the density of nearby conspecific plants. High local conspecific densities offset – even reversed – the negative effects of floral display size on percentage fruit set. Seed predation by mammals decreased fruit set in one population. Conclusions The results indicate that seed production in P. hirsuta can be maximized by selectively augmenting populations in areas containing isolated large plants, by reducing the population sizes of florivorous beetles and by excluding mammals that consume unripe fruits. PMID:24557879

Do understorey or overstorey traits drive tree encroachment on a drained raised bog?

PubMed

Jagodziński, A M; Horodecki, P; Rawlik, K; Dyderski, M K

2017-07-01

One of the most important threats to peatland ecosystems is drainage, resulting in encroachment of woody species. Our main aim was to check which features - overstorey or understorey vegetation - are more important for shaping the seedling bank of pioneer trees colonising peatlands (Pinus sylvestris and Betula pubescens). We hypothesised that tree stand parameters will be more important predictors of natural regeneration density than understorey vegetation parameters, and the former will be negatively correlated with species diversity and richness and also with functional richness and functional dispersion, which indicate a high level of habitat filtering. The study was conducted in the 'Zielone Bagna' nature reserve (NW Poland). We assessed the structure of tree stands and natural regeneration (of B. pubescens and P. sylvestris) and vegetation species composition. Random forest and DCA were applied to assess relationships between variables studied. Understorey vegetation traits affected tree seedling density (up to 0.5-m height) more than tree stand traits. Density of older seedlings depended more on tree stand traits. We did not find statistically significant relationships between natural regeneration densities and functional diversity components, except for functional richness, which was positively correlated with density of the youngest tree seedlings. Seedling densities were higher in plots with lower functional dispersion and functional divergence, which indicated that habitat filtering is more important than competition. Presence of an abundant seedling bank is crucial for the process of woody species encroachment on drained peatlands, thus its dynamics should be monitored in protected areas. © 2017 German Botanical Society and The Royal Botanical Society of the Netherlands.

Probing Cometary Chemistry with ALMA

NASA Technical Reports Server (NTRS)

Milam, Stefanie N.

2010-01-01

Comets are considered to bear the record of the primitive Solar nebula as remnants of planetesimals that formed the outer planets. To date there are just over two dozen known cometary species compared to the >150 known interstellar molecules. This is likely due to the challenges posed when attempting to measure the composition of these small bodies. With the significant improvement in sensitivity, ALMA will likely enable the detection of new molecules to help us gain better understanding of the chemical complexity found in comets. This advancement in sensitivity will also assist in the measurement of isotope ratios in various species. These values are imperative for determining the conditions during cometary formation as well as provide insight into ongoing speculations of parent species, the possible delivery of H2O to Earth, and a direct comparison to protostellar disk chemistry. The high angular resolution obtained with ALMA will be capable of resolving any compact distributions or density enhancements in the more extended distribution that may lead to a better understanding of the formation of these species in the outer coma. By studying comet compositions we gain insight into the composition of the early Solar System as well as their astrobiological implications.

Chaetognatha in the Bahía Magdalena lagoon complex, Baja California Sur, México: species composition and assemblages.

PubMed

Cota Meza, M S

2011-07-01

The chaetognaths from 187 zooplankton samples collected from the Bahia Magdalena lagoon complex, Baja California Sur, Mexico during March, June, July, August, September, November, and December 1982 were studied. Twelve species belonging to two genera were identified. Sagitta euneritica and S. enflata were the most abundant and most frequent species with maximum abundance in July (40,000 org/100 m(3) and 6100 org/100 m(3) respectively). Sagitta pacifica, S. regularis and S. pseudoserratodentata were stenothermic (21 to 25 degrees C), whereas the rest of the species were eurythermic (15.5 to 29.5 degrees C). Sagitta euneritica contributed considerably to the zooplanktonic biomass, increasing the density in particular in BahíaAlmejas. The analysis of the species assemblages (Morisita index) showed that S. pacifica and S. regularis interact more frequently in August when there is a change of the water masses that converge in this zone during summer, when the California Countercurrent predominates. The composition of taxa during winter is characterized by the dominance of S. euneritica. Entering the warm period, an abrupt change occurs in taxa composition of the three zones studied: channels, Bahía Magdalena, and BahíaAlmejas. The amplitude and distribution of S. peruviana was influenced possibility by the oceanographic conditions of ENSO 1982.

Micro-organisms behind the pollination scenes: microbial imprint on floral nectar sugar variation in a tropical plant community

PubMed Central

Canto, A.; Herrera, C. M.

2012-01-01

Background and Aims Variation in the composition of floral nectar reflects intrinsic plant characteristics as well as the action of extrinsic factors. Micro-organisms, particularly yeasts, represent one extrinsic factor that inhabit the nectar of animal-pollinated flowers worldwide. In this study a ‘microbial imprint hypothesis’ is formulated and tested, in which it is proposed that natural community-wide variation in nectar sugar composition will partly depend on the presence of yeasts in flowers. Methods Occurrence and density of yeasts were studied microscopically in single-flower nectar samples of 22 animal-pollinated species from coastal xeric and sub-humid tropical habitats of the Yucatán Peninsula, Mexico. Nectar sugar concentration and composition were concurrently determined on the same samples using high-performance liquid chromatography (HPLC) methods. Key Results Microscopical examination of nectar samples revealed the presence of yeasts in nearly all plant species (21 out of 22 species) and in about half of the samples examined (51·8 % of total, all species combined). Plant species and individuals differed significantly in nectar sugar concentration and composition, and also in the incidence of nectar yeasts. After statistically controlling for differences between plant species and individuals, nectar yeasts still accounted for a significant fraction of community-wide variance in all nectar sugar parameters considered. Significant yeast × species interactions on sugar parameters revealed that plant species differed in the nectar sugar correlates of variation in yeast incidence. Conclusions The results support the hypothesis that nectar yeasts impose a detectable imprint on community-wide variation in nectar sugar composition and concentration. Since nectar sugar features influence pollinator attraction and plant reproduction, future nectar studies should control for yeast presence and examine the extent to which microbial signatures on nectar characteristics ultimately have some influence on pollination services in plant communities. PMID:22915578

Environmental drivers of fish functional diversity and composition in the Lower Colorado River Basin

USGS Publications Warehouse

Pool, T.K.; Olden, J.D.; Whittier, Joanna B.; Paukert, C.P.

2010-01-01

Freshwater conservation efforts require an understanding of how natural and anthropogenic factors shape the present-day biogeography of native and non-native species. This knowledge need is especially acute for imperiled native fishes in the highly modified Lower Colorado River Basin (LCRB), USA. In the present study we employed both a taxonomic and functional approach to explore how natural and human-related environmental drivers shape landscape-scale patterns of fish community composition in the LCRB. Our results showed that hydrologic alteration, watershed land use, and regional climate explained 30.3% and 44.7% of the total variation in fish community taxonomic and functional composition, respectively. Watersheds with greater dam densities and upstream storage capacity supported higher non-native functional diversity, suggesting that dams have provided additional "niche opportunities" for non-native equilibrium life-history strategists by introducing new reservoir habitat and modifying downstream flow and thermal regimes. By contrast, watersheds characterized by greater upstream land protection, lower dam densities, and higher variation in spring and summer precipitation supported fish communities with a strong complement of native species (opportunistic-periodic strategists). In conclusion, our study highlights the utility of a life-history approach to better understand the patterns and processes by which fish communities vary along environmental gradients.

Investigation of mechanism and critical parameters for removal of arsenic from water using Zr-TiO2 composite.

PubMed

Anđelković, I; Amaizah, N R R; Marković, S B; Stanković, D; Marković, M; Kuzmanović, D; Roglić, G

2017-09-01

Using the microwave-hydrothermal method for the synthesis of composite, high surface density of hydroxyl groups, as an active adsorption sites for arsenic, was obtained. Adsorption mechanisms of As(III) and As(V) onto zirconium-doped titanium dioxide (Zr-TiO 2 ) were investigated and proposed using macroscopic and microscopic methods. Obtained results are suggesting inner-sphere and outer-sphere adsorption mechanisms for As(III) and As(V), respectively. This allowed us to identify parameters that are critical for the successful removal of arsenic from water, which is essential information for further optimization of the removal process. The composite was further applied for the removal of As(III) and As(V) from water in a dynamic flow through the reactor. Column study proved that the removal of both arsenic species below the value recommended by WHO can be achieved. Elution of As(III) and As(V) from the composite can be done by using small amounts of 0.01 M NaOH solution resulting in preconcentration of arsenic species and possible multiple usage of composite.

[IXODID TICKS (PARASITIFORMES: IXODIDAE) FROM SMALL MAMMALS IN DEFORESTED BOREAL HABITATS IN THE NORTHERN EUROPEAN RUSSIA].

PubMed

Bespyatova, L A; Bugmyrin, S V

2015-01-01

Changes in the population density of two hard tick species, Ixodes (Exopalpiger) trianguliceps Birula, 1895 and Ixodes persulcatus Schulze, 1930, were examined in 1998-2001, and in 2003-2004 near Gomselga Village (Kondopoga District, 62° 04' N, 33° 55' E) in central Karelia. Data on the abundance of ixodid ticks and the species composition of their hosts in 4 forest sites at different stages of post-felling regeneration (secondary succession), i. e. 7-14, 12-19, 25-32, and 80-87 after logging were obtained. I. persulcatus dominated, comprising 73 % of the total tick number in samples. Regenera- tion of the forest resulted in fluctuations of the population density of two examined tick species: I. (Exopalpiger) trianguliceps (larvae 2.8-5.3; nymphs 1.5-2.2; adults 0-0.09) and I. persulcatus (larvae 4.3-10.6; nymphs 0.6-4.2).

Short-term effects of experimental fires on a Mojave Desert seed bank

USGS Publications Warehouse

Esque, Todd C.; Young, James A.; Tracy, C. Richard

2010-01-01

A Mojave Desert shrub community was experimentally burned to understand changes in seed bank of desert annual plant species in response to wildfire. Seed mortality ranged from 55 to 80%, and fire caused significant losses of native and alien annual seeds. Schismus arabicus, Schismus barbatus, Bromus madritensis, Bromus tectorum, Erodium cicutarium and Plantago spp. made up >95% of the seed bank. Bromus spp. and Plantago spp. had proportionately greater mortality of seeds than did Schismus spp. and E. cicutarium. Schismus spp. can be lodged into soil cracks thus avoiding lethal temperatures. E. cicutarium has a self-drilling mechanism that places the seeds at greater depth in the soil. Greater seed mortality occurred beneath shrub canopies than interspaces for most species (Plantago, spp., Bromus spp., and E. cicutarium), but microsite had little effect on Schismus spp. Fire reduced the perennial Ambrosia dumosa densities under canopies. Fire reduced the mean number of species found in samples by about one species per plot and no species was extirpated on experimental plots. The relative abundances of common species did not change dramatically as a result of fire or microsite, however; seed densities varied by treatment and affected interpretations of species compositions.

How mammalian predation contributes to tropical tree community structure.

PubMed

Paine, C E Timothy; Beck, Harald; Terborgh, John

2016-12-01

The recruitment of seedlings from seeds is the key demographic transition for rain forest trees. Though tropical forest mammals are known to consume many seeds, their effects on tree community structure remain little known. To evaluate their effects, we monitored 8,000 seeds of 24 tree species using exclosure cages that were selectively permeable to three size classes of mammals for up to 4.4 years. Small and medium-bodied mammals removed many more seeds than did large mammals, and they alone generated beta diversity and negative density dependence, whereas all mammals reduced diversity and shaped local species composition. Thus, small and medium-bodied mammals more strongly contributed to community structure and promoted species coexistence than did large mammals. Given that seedling recruitment is seed limited for most species, alterations to the composition of the community of mammalian seed predators is expected to have long-term consequences for tree community structure in tropical forests. © 2016 by the Ecological Society of America.

Rhizosphere Competence and Biocontrol Effect of Pseudomonas sp. RU47 Independent from Plant Species and Soil Type at the Field Scale.

PubMed

Schreiter, Susanne; Babin, Doreen; Smalla, Kornelia; Grosch, Rita

2018-01-01

Biocontrol inoculants often show inconsistency in their efficacy at field scale and the reason for this remains often unclear. A high rhizosphere competence of inoculant strains is assumed to be a key factor for successful biocontrol effects as the biocontrol strain has to compete with the indigenous microbial community in the rhizosphere. It is known that many factors, among them plant species and soil type shape the rhizosphere microbial community composition. However, microbial community composition in the rhizosphere can also be influenced by the presence of a pathogen. We hypothesized that plant species, soil type, and a pathogen affect the rhizosphere competence of a biocontrol strain and its biocontrol effect against a soil-borne pathogen. To test the hypothesis, we used an experimental plot system with three soil types (diluvial sand, alluvial loam, loess loam) kept under similar agricultural management at the same field site for 12 years. We investigate the rhizosphere competence of Pseudomonas sp. RU47 in two plant species (potato and lettuce) and its biocontrol effect against Rhizoctonia diseases. The colonization density of a rifampicin resistant mutant of RU47 in the rhizosphere of both crops was evaluated by plate counts. Bacterial community compositions were analyzed by denaturing gradient gel electrophoresis (DGGE) of 16S rRNA gene fragments amplified from total community DNA. The inoculant RU47 was able to colonize the rhizosphere of both model crops in a sufficient density and to reduce disease severity of black scurf on potato and bottom rot on lettuce in all three soils. DGGE indicated that RU47 affected the bacterial community composition stronger in the rhizosphere of lettuce than in the potato rhizosphere. In contrast, the effect of the pathogen Rhizoctonia solani on the bacterial community was much stronger in the rhizosphere of potato than in the lettuce rhizosphere. A significant effect of RU47 on the Pseudomonas -specific gacA fingerprints of the rhizosphere was only observed in lettuce in alluvial soil. The soil type and plant species independent biocontrol effects of RU47 and its minor influence on the indigenous bacterial community composition might be important criteria for the registration and use of RU47 as biocontrol strain.

Rhizosphere Competence and Biocontrol Effect of Pseudomonas sp. RU47 Independent from Plant Species and Soil Type at the Field Scale

PubMed Central

Schreiter, Susanne; Babin, Doreen; Smalla, Kornelia; Grosch, Rita

2018-01-01

Biocontrol inoculants often show inconsistency in their efficacy at field scale and the reason for this remains often unclear. A high rhizosphere competence of inoculant strains is assumed to be a key factor for successful biocontrol effects as the biocontrol strain has to compete with the indigenous microbial community in the rhizosphere. It is known that many factors, among them plant species and soil type shape the rhizosphere microbial community composition. However, microbial community composition in the rhizosphere can also be influenced by the presence of a pathogen. We hypothesized that plant species, soil type, and a pathogen affect the rhizosphere competence of a biocontrol strain and its biocontrol effect against a soil-borne pathogen. To test the hypothesis, we used an experimental plot system with three soil types (diluvial sand, alluvial loam, loess loam) kept under similar agricultural management at the same field site for 12 years. We investigate the rhizosphere competence of Pseudomonas sp. RU47 in two plant species (potato and lettuce) and its biocontrol effect against Rhizoctonia diseases. The colonization density of a rifampicin resistant mutant of RU47 in the rhizosphere of both crops was evaluated by plate counts. Bacterial community compositions were analyzed by denaturing gradient gel electrophoresis (DGGE) of 16S rRNA gene fragments amplified from total community DNA. The inoculant RU47 was able to colonize the rhizosphere of both model crops in a sufficient density and to reduce disease severity of black scurf on potato and bottom rot on lettuce in all three soils. DGGE indicated that RU47 affected the bacterial community composition stronger in the rhizosphere of lettuce than in the potato rhizosphere. In contrast, the effect of the pathogen Rhizoctonia solani on the bacterial community was much stronger in the rhizosphere of potato than in the lettuce rhizosphere. A significant effect of RU47 on the Pseudomonas-specific gacA fingerprints of the rhizosphere was only observed in lettuce in alluvial soil. The soil type and plant species independent biocontrol effects of RU47 and its minor influence on the indigenous bacterial community composition might be important criteria for the registration and use of RU47 as biocontrol strain. PMID:29449832

Rethinking the role of edaphic condition in halophyte vegetation degradation on salt marshes due to coastal defense structure

NASA Astrophysics Data System (ADS)

Xie, Tian; Cui, Baoshan; Bai, Junhong; Li, Shanze; Zhang, Shuyan

2018-02-01

Determining how human disturbance affects plant community persistence and species conservation is one of the most pressing ecological challenges. The large-scale disturbance form defense structures usually have a long-term and potential effect on phytocommunity in coastal saltmarshes. Coastal defense structures usually remove the effect of tidal wave on tidal salt marshes. As a consequence, edaphic factors such as the salinity and moisture contents are disturbed by tidal action blocking. However, few previous studies have explicitly addressed the response of halophyte species persistence and dynamics to the changing edaphic conditions. The understanding of the response of species composition in seed banks and aboveground vegetation to the stress is important to identify ecological effect of coastal defense structures and provide usefully insight into restoration. Here, we conducted a field study to distinguish the density, species composition and relationships of seed bank with aboveground vegetation between tidal flat wetlands with and without coastal defense structures. We also addressed the role of edaphic condition in vegetation degradation caused by coastal defense structures in combination with field monitor and greenhouse experiments. Our results showed the density of the seed bank and aboveground vegetation in the tidal flat without coastal defense structures was significantly lower than the surrounded flat with coastal defense structures. A total of 14 species were founded in the surrounded flat seed bank and 11 species in the tidal flat, but three species were only recorded in aboveground vegetation of the tidal flat which was much lower than 24 aboveground species in the surrounded flat. The absent of species in aboveground vegetation contributed to low germination rate which depend on the edaphic condition. The germination of seeds in the seed bank were inhabited by high soil salinity in the tidal flat and low soil moisture in the surrounded flat. Our study supported the hypothesis that the change of edaphic condition caused by coastal defense structures was the main reason for the difference of the species composition similarity between aboveground vegetation and the soil seed bank between the tidal and surrounded flats. Therefore, mitigating the hydrological disturbance and maintaining the original state of edaphic factors would be useful implications for reducing the ecological effect of defense structure to vegetation communities in coastal salt marshes.

Predicting wading bird and aquatic faunal responses to ecosystem restoration scenarios

USGS Publications Warehouse

Beerens, James M.; Trexler, Joel C.; Catano, Christopher P.

2017-01-01

In large-scale conservation decisions, scenario planning identifies key uncertainties of ecosystem function linked to ecological drivers affected by management, incorporates ecological feedbacks, and scales up to answer questions robust to alternative futures. Wetland restoration planning requires an understanding of how proposed changes in surface hydrology, water storage, and landscape connectivity affect aquatic animal composition, productivity, and food-web function. In the Florida Everglades, reintroduction of historical hydrologic patterns is expected to increase productivity of all trophic levels. Highly mobile indicator species such as wading birds integrate secondary productivity from aquatic prey (small fishes and crayfish) over the landscape. To evaluate how fish, crayfish, and wading birds may respond to alternative hydrologic restoration plans, we compared predicted small fish density, crayfish density and biomass, and wading bird occurrence for existing conditions to four restoration scenarios that varied water storage and removal of levees and canals (i.e. decompartmentalization). Densities of small fish and occurrence of wading birds are predicted to increase throughout most of the Everglades under all restoration options because of increased flows and connectivity. Full decompartmentalization goes furthest toward recreating hypothesized historical patterns of fish density by draining excess water ponded by levees and hydrating areas that are currently drier than in the past. In contrast, crayfish density declined and species composition shifted under all restoration options because of lengthened hydroperiods (i.e. time of inundation). Under full decompartmentalization, the distribution of increased prey available for wading birds shifted south, closer to historical locations of nesting activity in Everglades National Park.

Mars Dayside Thermospheric Composition and Temperatures from the NGIMS MAVEN Instrument: Implications for Thermal Balances

NASA Astrophysics Data System (ADS)

Bougher, Stephen W.; Sharrar, Ryan; Bell, Jared M.; Mahaffy, Paul R.; Benna, Mehdi; Elrod, Meredith K.; Evans, J. Scott

2017-10-01

The Mars upper atmosphere, encompassing the thermosphere, ionosphere, and the lower exosphere (~100 to 500 km), constitutes the reservoir that regulates present day and historical escape processes from the planet. The characterization of this reservoir is therefore one of the major science objectives of the MAVEN mission. Current dayside thermospheric composition and temperatures are the focus of this study. The primary MAVEN instrument for in situ sampling of neutral thermospheric structure is the Neutral Gas and Ion Mass Spectrometer (NGIMS, Mahaffy et al. 2015) instrument. It measures the neutral composition of at least 11 key gas species and their major isotopes, with a vertical resolution of ~5 km for targeted species. Thermospheric temperatures are derived from neutral density vertical structure (Bougher et al., 2017). Four NGIMS dayside sampling periods are chosen, spanning mid-April 2015 to late-November 2016, for which the solar zenith angle is less than 60°. The Martian season advances from Ls ~ 335 to 256, while solar EUV fluxes are declining from solar moderate to minimum conditions. Each sampling period is composed of ~150 to 200 orbits (NGIMS Level 2 V07_R02 files). We focus our study on 5 dayside species: CO2, O, N2, CO, and He. Inbound density profiles (and derived temperatures) are extracted and averaged over various orbital intervals, in order to compute longitude averaged profiles, and to minimize the impact of small scale wave structure. Corresponding Mars Global Ionosphere Thermosphere Model (M-GITM, Bougher et al., 2015) predictions for the same seasonal/solar cycle conditions are compared to NGIMS density measurements along the inbound orbit tracks below ~225 km. This M-GITM model is primarily driven by solar EUV-UV forcing at these altitudes; its simulations are used to provide a first comparison with the climatic trends (and variability) gleaned from these NGIMS datasets. M-GITM underlying dayside thermal balances required to reproduce these measured density and temperature profiles are also presented, with the goal of constraining dayside CO2 cooling rates.

Variability in spatial and temporal occurrence of presettlement and settlement-stage fishes associated with shallow reefs.

PubMed

Pattrick, P; Strydom, N A

2017-03-01

Presettlement and settlement-stage fishes were studied in a large, log-spiral bay in temperate South Africa. The aim was to describe the assemblage composition, density and distribution associated with four types of habitats common to the bay: high profile reef, low profile reef, reef-associated sand and open sand spatially separated from reef. Samples were collected with both a plankton ring net and a light trap at each habitat type as part of a mixed-method approach. A total of 4084 presettlement and settlement-stage fishes belonging to 31 teleost families and 84 species were captured. Reef-associated sand and open sand habitats yielded higher species richness and diversity than the high and low-profile reef habitats. Engraulidae, Gobiidae, Clupeidae and Cynoglossidae were the dominant fish families captured with the ring net, while Engraulidae, Clupeidae, Carangidae and Clinidae were captured with the light trap. A temporal difference in the abundance of presettlement fishes occurred between the sampling periods with highest values recorded during the summer settlement period. Habitat type together with associated physico-chemical variables played a pivotal role in determining presettlement fish species composition, density and distribution across habitat types. © 2016 The Fisheries Society of the British Isles.

Patterns of reflected radiance associated with geobotanical anomalies

NASA Technical Reports Server (NTRS)

Birnie, R. W.; Stone, T. A.; Francica, J. R.

1985-01-01

This paper summarizes three remote sensing experiments in which changes in remotely measured reflected radiance patterns of vegetation correlated with changes in geology. In two cases using airborne spectroradiometer data, changes in the physical properties of a uniform species correlated with zones of porphyry copper mineralization. In another case using Landsat digital data, changes were detected in the distribution and density of a number of species and combined with soil brightness data to produce a composite index useful for distinguishing lithologies.

Comparison of Methods for Predicting the Compositional Dependence of the Density and Refractive Index of Organic-Aqueous Aerosols.

PubMed

Cai, Chen; Miles, Rachael E H; Cotterell, Michael I; Marsh, Aleksandra; Rovelli, Grazia; Rickards, Andrew M J; Zhang, Yun-Hong; Reid, Jonathan P

2016-08-25

Representing the physicochemical properties of aerosol particles of complex composition is of crucial importance for understanding and predicting aerosol thermodynamic, kinetic, and optical properties and processes and for interpreting and comparing analysis methods. Here, we consider the representations of the density and refractive index of aqueous-organic aerosol with a particular focus on the dependence of these properties on relative humidity and water content, including an examination of the properties of solution aerosol droplets existing at supersaturated solute concentrations. Using bulk phase measurements of density and refractive index for typical organic aerosol components, we provide robust approaches for the estimation of these properties for aerosol at any intermediate composition between pure water and pure solute. Approximately 70 compounds are considered, including mono-, di- and tricarboxylic acids, alcohols, diols, nitriles, sulfoxides, amides, ethers, sugars, amino acids, aminium sulfates, and polyols. We conclude that the molar refraction mixing rule should be used to predict the refractive index of the solution using a density treatment that assumes ideal mixing or, preferably, a polynomial dependence on the square root of the mass fraction of solute, depending on the solubility limit of the organic component. Although the uncertainties in the density and refractive index predictions depend on the range of subsaturated compositional data available for each compound, typical errors for estimating the solution density and refractive index are less than ±0.1% and ±0.05%, respectively. Owing to the direct connection between molar refraction and the molecular polarizability, along with the availability of group contribution models for predicting molecular polarizability for organic species, our rigorous testing of the molar refraction mixing rule provides a route to predicting refractive indices for aqueous solutions containing organic molecules of arbitrary structure.

The role of the hydrological cycle on the distribution patterns of fish assemblages in an Andean stream.

PubMed

Ríos-Pulgarín, M I; Barletta, M; Mancera-Rodríguez, N J

2016-07-01

The seasonal and interannual changes of the fish assemblage in the main channel and littoral zone of the Guarinó River, a torrential system located in the Colombian Andean foothills, were examined in relation to the physical and chemical environmental changes associated with the hydrological cycle and the El Niño-La Niña-Southern Oscillation (ENSO) between 2007 and 2010. Four samplings per year (in dry season and high water) were performed. Environmental variables (temperature, pH, conductivity, turbidity, oxygen, total nitrogen, orthophosphate, depth and flow rate) were contrasted with ANOVAs and a discriminant analysis to establish temporal patterns. Biological descriptors (richness, density and biomass) were contrasted with ANCOVAs. The temporal patterns of the taxonomic and functional composition and the density of the fish assemblages were examined with respect to environmental variables through canonical discriminant analysis per habitat. Interannual differences were significant with regard to density and richness for the main channel habitat; while in the littoral zone, the differences were significant between both the year and seasons. Discriminant analysis showed variations in species composition and relative abundance between the main channel and the littoral zone under contrasting hydrological conditions of El Niño-La Niña. High flows from 2008 to 2009 (La Niña) favoured resident species (e.g. Creagrutus magdalenae) and small benthic Siluriformes (e.g. Chaetostoma spp.), but was limited to migratory species (e.g. Prochilodus magdalenae). From 2009 to 2010 (El Niño), the most common species were reduced and rare species increased. River flow, temperature and oxygen were the variables that had the largest influences on the seasonal and interannual differences in the fish assemblage structure of the Guarinó River. The results suggested that the presence and abundance of species and functional groups in different habitats were regulated by stochastic conditions, such as droughts, floods and drag events associated with the Southern Oscillation phenomenon (ENSO), acting as a hydrological disturbance on the habitats and generating different responses according to the adaptive characteristics of the species. © 2015 The Fisheries Society of the British Isles.

Estimation of shrub leaf biomass available to white-tailed deer.

Treesearch

Lynn L. Rogers; Ronald E. McRoberts

1992-01-01

Describes an objective method for using shrub height to estimate leaf biomass within reach of deer. The method can be used in conjunction with surveys of shrub height, shrub density, and shrub species composition to evaluate deer habitat over large areas and to predict trends in forage availability with further forest growth.

Stand dynamics in 60-year-old Allegheny hardwoods after thinning

Treesearch

Gary W. Miller

1997-01-01

Stand dynamics and tree growth in even-aged hardwood stands can be influenced by manipulating relative stand density, species composition, and stand structure. Land managers need quantitative information on the effect of vegetation manipulation to prescribe stand treatments that are appropriate for specific management objectives. Sixty-year-old stands composed of black...

Understory vegetation response to mechanical mastication and other fuels treatments in a ponderosa pine forest

Treesearch

Jeffrey M. Kane; J. Morgan Varner; Eric E. Knapp

2010-01-01

Questions: What influence does mechanical mastication and other fuel treatments have on: (1) canopy and forest floor response variables that influence understory plant development; (2) initial understory vegetation cover, diversity, and composition; and (3) shrub and non-native species density in a secondgrowth ponderosa pine forest....

Factors associated with the decline disease of sugar maple on the Allegheny Plateau

Treesearch

Stephen B. Horsley; Robert P. Long; Scott W. Bailey; Richard A. Hallett; Thomas J. Hall

2000-01-01

Mortality of sugar maple (Acer saccharum Marsh.) has reached unusually high levels across northern Pennsylvania since the early to mid-1980s. We evaluated the influence of glaciation, topographic position, foliage chemistry, defoliation history, and stand characteristics (species composition, structure, density) on the health of sugar maple in 43...

The Urban Forest Effects (UFORE) model: quantifying urban forest structure and functions

Treesearch

David J. Nowak; Daniel E. Crane

2000-01-01

The Urban Forest Effects (UFORE) computer model was developed to help managers and researchers quantify urban forest structure and functions. The model quantifies species composition and diversity, diameter distribution, tree density and health, leaf area, leaf biomass, and other structural characteristics; hourly volatile organic compound emissions (emissions that...

Old-growth Wooded Pasture in the Ozarks

Treesearch

David H. Jurney; David W. Stahle

2004-01-01

Forests in the Ozarks are ancient: the dominance and density of their various arboreal and herbaceous species have fluctuated over time in relation to climatic change and cultural influences. This study examines the nature of the pre-European forest composition in the Ozarks through studies of geology and soils, General Land Office surveys, archeology, and...

PROLONGED FLOODING DECREASED STEM DENSITY, TREE SIZE AND SHIFTED COMPOSITION TOWARDS CLONAL SPECIES IN A CENTRAL FLORIDA HARDWOOD SWAMP

EPA Science Inventory

Human modifications of the landscape often cause changes in regional hydrology that, in turn, can result in the alteration of wetland hydrology. Altering hydrology can lead to hydroperiods that have prolonged or insufficient hydration, which can often cause changes in plant comm...

Test of localized nanagement for reducing deer browsing in forest regeneration areas

Treesearch

Brad F. Miller; Tyler A. Campbell; Ben R. Laseter; W.Mark Ford; Karl V. Miller

2010-01-01

White-tailed deer (Odocoileus virginianus) browsing in forest regeneration sites can affect current and future stand structure and species composition. Removal of deer social units (localized management) has been proposed as a strategy to alleviate deer overbrowsing in forest systems. We conducted an experimental localized removal in a high-density...

Historical trajectories and restoration strategies for the Mississippi River alluvial valley

Treesearch

Brice B. Hanberry; John M. Kabrick; Hong S. He; Brian J. Palik

2012-01-01

Unlike upland forests in the eastern United States, little research is available about the composition and structure of bottomland forests before Euro-American settlement. To provide a historical reference encompassing spatial variation for the Lower Mississippi River Alluvial Valley, we quantified forest types, species distributions, densities, and stocking of...

Assessing ecosystem restoration alternatives in eastern deciduous forests: the view from belowground

Treesearch

Ralph E.J. Boerner; Adam T. Coates; Daniel A. Yaussy; Thomas A. Waldrop

2008-01-01

Both structural and functional approaches to restoration of eastern deciduous forests are becoming more common as recognition of the altered state of these ecosystems grows. In our study, structural restoration involves mechanically modifying the woody plant assemblage to a species composition, density, and community structure specified by the restoration goals....

A Restoration Design for Least Bell's Vireo Habitat in San Diego County

Treesearch

Kathryn J. Baird; John P. Rieger

1989-01-01

This paper describes the procedure for developing a specific habitat restoration model. Results of a detailed Least Bell's Vireo (Vireo bellii pusillus) habitat study on the Sweetwater River drainage, San Diego County California, generated the baseline vegetative and habitat data used. Mean percent cover, density, abundance, species composition...

Species composition of sand flies and bionomics of Phlebotomus papatasi and P. sergenti (Diptera: Psychodidae) in cutaneous leishmaniasis endemic foci, Morocco.

PubMed

Boussaa, Samia; Kahime, Kholoud; Samy, Abdallah M; Salem, Abdelkrim Ben; Boumezzough, Ali

2016-02-02

Cutaneous Leishmaniasis (CL) is one of the most neglected tropical diseases in Morocco. Leishmania major and L. tropica are the main culprits identified in all endemic foci across the country. These two etiological agents are transmitted by Phlebotomus papatasi and P. sergenti, the two most prevalent sand fly species in Morocco. Previous studies reflected gaps of knowledge regarding the environmental fingerprints that affect the distribution of these two potential vectors across Morocco. The sand flies were collected from 48 districts across Morocco using sticky paper traps. Collected specimens were preserved in 70% ethanol for further processing and identification. Male and female densities were calculated in each site to examine their relations to the environmental conditions across these sites. The study used 19 environmental variables including precipitation, aridity, elevation, soil variables and a composite representing maximum, minimum and mean of day- and night-time Land Surface Temperature (LST), and Normalized Difference Vegetation Index (NDVI). A total of 11,717 specimens were collected during this entomological survey. These specimens represented 11 species of two genera; Phlebotomus and Sergentomyia. Correlations of the sand fly densities with the environmental variables were estimated to identify the variables which influence the distribution of the two potential vectors, Phlebotomus papatasi and P. sergenti, associated with all CL endemic foci across the country. The density of P. papatasi was most affected by temperature changes. The study showed a significant positive correlation between the densities of both sexes of P. papatasi and night-time temperatures. Both P. papatasi and P. sergenti showed a negative correlation with aridity, but, such correlation was only significant in case of P. papatasi. NDVI showed a positive correlation only with densities of P. sergenti, while, soil PH and soil water stress were negatively correlated with the densities of both males and females of only P. papatasi. Our results identified the sand fly species across all CL endemic sites and underlined the influences of night-time temperature, soil water stress and NDVI as the most important variables affecting the sand fly distribution in all sampled sites. This preliminary study considered the importance of these covariates to anticipate the potential distribution of P. papatasi and P. sergenti in Morocco.

Proximate composition, energetic value, and relative abundance of prey fish from the inshore eastern Bering Sea: Implications for piscivorous predators

USGS Publications Warehouse

Ball, J.R.; Esler, Daniel N.; Schmutz, J.A.

2007-01-01

Changing ocean conditions and subsequent shifts in forage fish communities have been linked to numerical declines of some piscivorous marine birds and mammals in the North Pacific. However, limited information about fish communities is available for some regions, including nearshore waters of the eastern Bering Sea, where many piscivores reside. We determined proximate composition and energetic value of a suite of potential forage fish collected from an estuary on the Yukon-Kuskokwim Delta, Alaska, during 2002 and 2003. Across species, energy density ranged from 14.5 to 20.7 kJ g−1 dry mass and varied primarily as a function of lipid content. Total energy content was strongly influenced by body length and we provide species-specific predictive models of total energy based on this relationship; some models may be improved further by incorporating year and date effects. Based on observed energetic differences, we conclude that variation in fish size, quantity, and species composition of the prey community could have important consequences for piscivorous predators.

Fish assemblages in Tanzanian mangrove creek systems influenced by solar salt farm constructions

NASA Astrophysics Data System (ADS)

Mwandya, Augustine W.; Gullström, Martin; Öhman, Marcus C.; Andersson, Mathias H.; Mgaya, Yunus D.

2009-04-01

Deforestation of mangrove forests is common occurrence worldwide. We examined fish assemblage composition in three mangrove creek systems in Tanzania (East Africa), including two creeks where the upper parts were partly clear-cut of mangrove forest due to the construction of solar salt farms, and one creek with undisturbed mangrove forest. Fish were caught monthly for one year using a seine net (each haul covering 170 m 2) within three locations in each creek, i.e. at the upper, intermediate and lower reaches. Density, biomass and species number of fish were lower in the upper deforested sites compared to the mangrove-fringed sites at the intermediate and lower parts in the two creeks affected by deforestation, whereas there were no differences among the three sites in the undisturbed mangrove creek system. In addition, multivariate analyses showed that the structure of fish assemblages varied between forested and clear-cut sites within the two disturbed creeks, but not within the undisturbed creek. Across the season, we found no significant differences except for a tendency of a minor increase in fish densities during the rainy season. At least 75% of the fishes were juveniles and of commercial interest for coastal fisheries and/or aquaculture. Mugil cephalus, Gerres oyena and Chanos chanos were the most abundant species in the forested sites. The dominant species in the clear-cut areas were M. cephalus and Elops machnata, which were both found in relatively low abundances compared to the undisturbed areas. The conversion of mangrove forests into solar salt farms not only altered fish assemblage composition, but also water and sediment conditions. In comparison with undisturbed areas, the clear-cut sites showed higher salinity, water temperature as well as organic matter and chlorophyll a in the sediments. Our results suggest that mangrove habitat loss and changes in environmental conditions caused by salt farm developments will decrease fish densities, biomass and species numbers as well as alter the overall fish assemblage composition in the salt farm area but not downstream in the creek.

Effects of 10-year management regimes on the soil seed bank in saline-alkaline grassland.

PubMed

Ma, Hongyuan; Yang, Haoyu; Liang, Zhengwei; Ooi, Mark K J

2015-01-01

Management regimes for vegetation restoration of degraded grasslands can significantly affect the process of ecological succession. However, few studies have focused on variation in the soil seed bank during vegetation restoration under different management regimes, especially in saline-alkaline grassland habitats. Our aim was to provide insights into the ecological effects of grassland management regimes on soil seed bank composition and vegetation establishment in mown, fenced, transplanted and natural grassland sites, all dominated by the perennial rhizomatous grass Leymus chinensis. We studied species composition and diversity in both the soil seed bank and aboveground vegetation in differently managed grasslands in Northeast China. An NMDS (nonmetric multidimensional scaling) was used to evaluate the relationship between species composition, soil seed banks, aboveground vegetation and soil properties. Fenced and mown grassland sites had high density and species richness in both the soil seed bank and aboveground vegetation. The Transplanted treatment exhibited the highest vegetation growth and seed production of the target species L. chinensis. Seeds of L. chinensis in the soil occurred only in transplanted and natural grassland. Based on the NMDS analysis, the number of species in both the soil seed bank and aboveground vegetation were significantly related to soil Na+, Cl-, RSC (residual sodium carbonate), alkalinity, ESP (exchangeable sodium percentage) and AP (available phosphorus). Soil seed bank composition and diversity in the saline-alkaline grassland were significantly affected by the management regimes implemented, and were also significantly related to the aboveground vegetation and several soil properties. Based on vegetative growth, reproductive output and maintenance of soil seed bank, the transplanting was identified as the most effective method for relatively rapid restoration of the target species L. chinensis. This approach could be beneficial for the restoration of dominant species in a wide range of degraded grassland ecosystems.

Liana abundance, diversity, and distribution on Barro Colorado Island, Panama.

PubMed

Schnitzer, Stefan A; Mangan, Scott A; Dalling, James W; Baldeck, Claire A; Hubbell, Stephen P; Ledo, Alicia; Muller-Landau, Helene; Tobin, Michael F; Aguilar, Salomon; Brassfield, David; Hernandez, Andres; Lao, Suzanne; Perez, Rolando; Valdes, Oldemar; Yorke, Suzanne Rutishauser

2012-01-01

Lianas are a key component of tropical forests; however, most surveys are too small to accurately quantify liana community composition, diversity, abundance, and spatial distribution - critical components for measuring the contribution of lianas to forest processes. In 2007, we tagged, mapped, measured the diameter, and identified all lianas ≥1 cm rooted in a 50-ha plot on Barro Colorado Island, Panama (BCI). We calculated liana density, basal area, and species richness for both independently rooted lianas and all rooted liana stems (genets plus clones). We compared spatial aggregation patterns of liana and tree species, and among liana species that varied in the amount of clonal reproduction. We also tested whether liana and tree densities have increased on BCI compared to surveys conducted 30-years earlier. This study represents the most comprehensive spatially contiguous sampling of lianas ever conducted and, over the 50 ha area, we found 67,447 rooted liana stems comprising 162 species. Rooted lianas composed nearly 25% of the woody stems (trees and lianas), 35% of woody species richness, and 3% of woody basal area. Lianas were spatially aggregated within the 50-ha plot and the liana species with the highest proportion of clonal stems more spatially aggregated than the least clonal species, possibly indicating clonal stem recruitment following canopy disturbance. Over the past 30 years, liana density increased by 75% for stems ≥1 cm diameter and nearly 140% for stems ≥5 cm diameter, while tree density on BCI decreased 11.5%; a finding consistent with other neotropical forests. Our data confirm that lianas contribute substantially to tropical forest stem density and diversity, they have highly clumped distributions that appear to be driven by clonal stem recruitment into treefall gaps, and they are increasing relative to trees, thus indicating that lianas will play a greater role in the future dynamics of BCI and other neotropical forests.

Territorial user rights for fisheries as ancillary instruments for marine coastal conservation in Chile.

PubMed

Gelcich, Stefan; Fernández, Miriam; Godoy, Natalio; Canepa, Antonio; Prado, Luis; Castilla, Juan Carlos

2012-12-01

Territorial user rights for fisheries have been advocated as a way to achieve sustainable resource management. However, few researchers have empirically assessed their potential as ancillary marine conservation instruments by comparing them to no-take marine protected areas. In kelp (Lessonia trabeculata) forests of central Chile, we compared species richness, density, and biomass of macroinvertebrates and reef fishes among territorial-user-right areas with low-level and high-level enforcement, no-take marine protected areas, and open-access areas in 42 100-m subtidal transects. We also assessed structural complexity of the kelp forest and substratum composition. Multivariate randomized permutation tests indicated macroinvertebrate and reef fish communities associated with the different access regimes differed significantly. Substratum composition and structural complexity of kelp forest did not differ among access regimes. Univariate analyses showed species richness, biomass, and density of macroinvertebrates and reef fishes were greater in highly enforced territorial-user-right areas and no-take marine protected areas than in open-access areas. Densities of macroinvertebrates and reef fishes of economic importance were not significantly different between highly enforced territorial-user-right and no-take marine protected areas. Densities of economically important macroinvertebrates in areas with low-level enforcement were significantly lower than those in areas with high-level enforcement and no-take marine protected areas but were significantly higher than in areas with open access. Territorial-user-right areas could be important ancillary conservation instruments if they are well enforced. ©2012 Society for Conservation Biology.

Selective logging: does the imprint remain on tree structure and composition after 45 years?

PubMed

Osazuwa-Peters, Oyomoare L; Chapman, Colin A; Zanne, Amy E

2015-01-01

Selective logging of tropical forests is increasing in extent and intensity. The duration over which impacts of selective logging persist, however, remains an unresolved question, particularly for African forests. Here, we investigate the extent to which a past selective logging event continues to leave its imprint on different components of an East African forest 45 years later. We inventoried 2358 stems ≥10 cm in diameter in 26 plots (200 m × 10 m) within a 5.2 ha area in Kibale National Park, Uganda, in logged and unlogged forest. In these surveys, we characterized the forest light environment, taxonomic composition, functional trait composition using three traits (wood density, maximum height and maximum diameter) and forest structure based on three measures (stem density, total basal area and total above-ground biomass). In comparison to unlogged forests, selectively logged forest plots in Kibale National Park on average had higher light levels, different structure characterized by lower stem density, lower total basal area and lower above-ground biomass, and a distinct taxonomic composition driven primarily by changes in the relative abundance of species. Conversely, selectively logged forest plots were like unlogged plots in functional composition, having similar community-weighted mean values for wood density, maximum height and maximum diameter. This similarity in functional composition irrespective of logging history may be due to functional recovery of logged forest or background changes in functional attributes of unlogged forest. Despite the passage of 45 years, the legacy of selective logging on the tree community in Kibale National Park is still evident, as indicated by distinct taxonomic and structural composition and reduced carbon storage in logged forest compared with unlogged forest. The effects of selective logging are exerted via influences on tree demography rather than functional trait composition.

Selective logging: does the imprint remain on tree structure and composition after 45 years?

PubMed Central

Osazuwa-Peters, Oyomoare L.; Chapman, Colin A.; Zanne, Amy E.

2015-01-01

Selective logging of tropical forests is increasing in extent and intensity. The duration over which impacts of selective logging persist, however, remains an unresolved question, particularly for African forests. Here, we investigate the extent to which a past selective logging event continues to leave its imprint on different components of an East African forest 45 years later. We inventoried 2358 stems ≥10 cm in diameter in 26 plots (200 m × 10 m) within a 5.2 ha area in Kibale National Park, Uganda, in logged and unlogged forest. In these surveys, we characterized the forest light environment, taxonomic composition, functional trait composition using three traits (wood density, maximum height and maximum diameter) and forest structure based on three measures (stem density, total basal area and total above-ground biomass). In comparison to unlogged forests, selectively logged forest plots in Kibale National Park on average had higher light levels, different structure characterized by lower stem density, lower total basal area and lower above-ground biomass, and a distinct taxonomic composition driven primarily by changes in the relative abundance of species. Conversely, selectively logged forest plots were like unlogged plots in functional composition, having similar community-weighted mean values for wood density, maximum height and maximum diameter. This similarity in functional composition irrespective of logging history may be due to functional recovery of logged forest or background changes in functional attributes of unlogged forest. Despite the passage of 45 years, the legacy of selective logging on the tree community in Kibale National Park is still evident, as indicated by distinct taxonomic and structural composition and reduced carbon storage in logged forest compared with unlogged forest. The effects of selective logging are exerted via influences on tree demography rather than functional trait composition. PMID:27293697

Estimating the potential biodiversity impact of redeveloping small urban spaces: the Natural History Museum’s grounds

PubMed Central

Knapp, Sandra; Purvis, Andy

2017-01-01

Background With the increase in human population, and the growing realisation of the importance of urban biodiversity for human wellbeing, the ability to predict biodiversity loss or gain as a result of land use change within urban settings is important. Most models that link biodiversity and land use are at too coarse a scale for informing decisions, especially those related to planning applications. Using the grounds of the Natural History Museum, London, we show how methods used in global models can be applied to smaller spatial scales to inform urban planning. Methods Data were extracted from relevant primary literature where species richness had been recorded in more than one habitat type within an urban setting. As within-sample species richness will increase with habitat area, species richness estimates were also converted to species density using theory based on the species–area relationship. Mixed-effects models were used to model the impact on species richness and species density of different habitat types, and to estimate these metrics in the current grounds and under proposed plans for redevelopment. We compared effects of three assumptions on how within-sample diversity scales with habitat area as a sensitivity analysis. A pre-existing database recording plants within the grounds was also used to estimate changes in species composition across different habitats. Results Analysis estimated that the proposed plans would result in an increase of average biodiversity of between 11.2% (when species density was modelled) and 14.1% (when within-sample species richness was modelled). Plant community composition was relatively similar between the habitats currently within the grounds. Discussion The proposed plans for change in the NHM grounds are estimated to result in a net gain in average biodiversity, through increased number and extent of high-diversity habitats. In future, our method could be improved by incorporating purposefully collected ecological survey data (if resources permit) and by expanding the data sufficiently to allow modelling of the temporal dynamics of biodiversity change after habitat disturbance and creation. Even in its current form, the method produces transparent quantitative estimates, grounded in ecological data and theory, which can be used to inform relatively small scale planning decisions. PMID:29104821

Mitochondria-Targeting Magnetic Composite Nanoparticles for Enhanced Phototherapy of Cancer.

PubMed

Guo, Ranran; Peng, Haibao; Tian, Ye; Shen, Shun; Yang, Wuli

2016-09-01

Photothermal therapy (PTT) and photodynamic therapy (PDT) are promising cancer treatment modalities in current days while the high laser power density demand and low tumor accumulation are key obstacles that have greatly restricted their development. Here, magnetic composite nanoparticles for dual-modal PTT and PDT which have realized enhanced cancer therapeutic effect by mitochondria-targeting are reported. Integrating PTT agent and photosensitizer together, the composite nanoparticles are able to generate heat and reactive oxygen species (ROS) simultaneously upon near infrared (NIR) laser irradiation. After surface modification of targeting ligands, the composite nanoparticles can be selectively delivered to the mitochondria, which amplify the cancer cell apoptosis induced by hyperthermia and the cytotoxic ROS. In this way, better photo therapeutic effects and much higher cytotoxicity are achieved by utilizing the composite nanoparticles than that treated with the same nanoparticles missing mitochondrial targeting unit at a low laser power density. Guided by NIR fluorescence imaging and magnetic resonance imaging, then these results are confirmed in a humanized orthotropic lung cancer model. The composite nanoparticles demonstrate high tumor accumulation and excellent tumor regression with minimal side effect upon NIR laser exposure. Therefore, the mitochondria-targeting composite nanoparticles are expected to be an effective phototherapeutic platform in oncotherapy. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

[Physico-chemical characteristics of ambient particles settling upon leaf surface of six conifers in Beijing].

PubMed

Wang, Lei; Hasi, Eerdun; Liu, Lian-You; Gao, Shang-Yu

2007-03-01

The study on the density of ambient particles settling upon the leaf surface of six conifers in Beijing, the micro-configurations of the leaf surface, and the mineral and element compositions of the particles showed that at the same sites and for the same tree species, the density of the particles settling upon leaf surface increased with increasing ambient pollution, but for various tree species, it differed significantly, with the sequence of Sabina chinensis and Platycladus orientalis > Cedrus deodara and Pinus bungeana > P. tabulaeformis and Picea koraiensis. Due to the effects of road dust, low height leaf had a larger density of particles. The density of the particles was smaller in summer than in winter because of the rainfall and new leaf growth. The larger the roughness of leaf surface, the larger density of the particles was. In the particles, the overall content of SiO2, CaCO3, CaMg(CO3,), NaCl, 2CaSO4 . H2O, CaSO4 . 2H2O and Fe2O3 was about 10%-30%, and the main minerals were montmorillonite, illite, kaolinite and feldspar. The total content of 21 test elements in the particles reached 16%-37%, among which, Ca, Al, Fe, Mg, K, Na and S occupied 97% or more, while the others were very few and less affected by sampling sites and tree species.

Co-occurrence Patterns of the Dengue Vector Aedes aegypti and Aedes mediovitattus, a Dengue Competent Mosquito in Puerto Rico

PubMed Central

Little, Eliza; Barrera, Roberto; Seto, Karen C.; Diuk-Wasser, Maria

2015-01-01

Aedes aegypti is implicated in dengue transmission in tropical and subtropical urban areas around the world. Ae. aegypti populations are controlled through integrative vector management. However, the efficacy of vector control may be undermined by the presence of alternative, competent species. In Puerto Rico, a native mosquito, Ae. mediovittatus, is a competent dengue vector in laboratory settings and spatially overlaps with Ae. aegypti. It has been proposed that Ae. mediovittatus may act as a dengue reservoir during inter-epidemic periods, perpetuating endemic dengue transmission in rural Puerto Rico. Dengue transmission dynamics may therefore be influenced by the spatial overlap of Ae. mediovittatus, Ae. aegypti, dengue viruses, and humans. We take a landscape epidemiology approach to examine the association between landscape composition and configuration and the distribution of each of these Aedes species and their co-occurrence. We used remotely sensed imagery from a newly launched satellite to map landscape features at very high spatial resolution. We found that the distribution of Ae. aegypti is positively predicted by urban density and by the number of tree patches, Ae. mediovittatus is positively predicted by the number of tree patches, but negatively predicted by large contiguous urban areas, and both species are predicted by urban density and the number of tree patches. This analysis provides evidence that landscape composition and configuration is a surrogate for mosquito community composition, and suggests that mapping landscape structure can be used to inform vector control efforts as well as to inform urban planning. PMID:21989642

Ecological consequences of forest elephant declines for Afrotropical forests.

PubMed

Poulsen, John R; Rosin, Cooper; Meier, Amelia; Mills, Emily; Nuñez, Chase L; Koerner, Sally E; Blanchard, Emily; Callejas, Jennifer; Moore, Sarah; Sowers, Mark

2018-06-01

Poaching is rapidly extirpating African forest elephants (Loxodonta cyclotis) from most of their historical range, leaving vast areas of elephant-free tropical forest. Elephants are ecological engineers that create and maintain forest habitat; thus, their loss will have large consequences for the composition and structure of Afrotropical forests. Through a comprehensive literature review, we evaluated the roles of forest elephants in seed dispersal, nutrient recycling, and herbivory and physical damage to predict the cascading ecological effects of their population declines. Loss of seed dispersal by elephants will favor tree species dispersed abiotically and by smaller dispersal agents, and tree species composition will depend on the downstream effects of changes in elephant nutrient cycling and browsing. Loss of trampling and herbivory of seedlings and saplings will result in high tree density with release from browsing pressures. Diminished seed dispersal by elephants and high stem density are likely to reduce the recruitment of large trees and thus increase homogeneity of forest structure and decrease carbon stocks. The loss of ecological services by forest elephants likely means Central African forests will be more like Neotropical forests, from which megafauna were extirpated thousands of years ago. Without intervention, as much as 96% of Central African forests will have modified species composition and structure as elephants are compressed into remaining protected areas. Stopping elephant poaching is an urgent first step to mitigating these effects, but long-term conservation will require land-use planning that incorporates elephant habitat into forested landscapes that are being rapidly transformed by industrial agriculture and logging. © 2017 Society for Conservation Biology.

Vacancy-mediated fcc/bcc phase separation in Fe 1-xNi x ultrathin films

DOE PAGES

Mentes, T. O.; Stojic, N.; Vescovo, E.; ...

2016-08-01

The phase separation occurring in Fe-Ni thin lms near the Invar composition is studied by using high resolution spectromicroscopy techniques and density functional theory calculations. Annealed at temperatures around 300 C, Fe 0.70Ni 0.30 lms on W(110) break into micron-sized bcc and fcc domains with compositions in agreement with the bulk Fe-Ni phase diagram. Ni is found to be the di using species in forming the chemical heterogeneity. The experimentally-determined energy barrier of 1.59 0.09 eV is identi ed as the vacancy formation energy via density functional theory calculations. Thus, the principal role of the surface in the phase separationmore » process is attributed to vacancy creation without interstitials.« less

Biodiversity and functional regeneration during secondary succession in a tropical dry forest: from microorganisms to mammals

NASA Astrophysics Data System (ADS)

do Espírito Santo, M. M.; Neves, F. S.; Valério, H. M.; Leite, L. O.; Falcão, L. A.; Borges, M.; Beirão, M.; Reis, R., Jr.; Berbara, R.; Nunes, Y. R.; Silva, A.; Silva, L. F.; Siqueira, P. R.

2015-12-01

In this study, we aimed to determine the changes on soil traits, forest structure and species richness and composition of multiple groups of organisms along secondary succession in a tropical dry forest (TDF) in southeastern Brazil. We defined three successional stages based in forest vertical and horizontal structure and age: early (18-25 years), intermediate (50-60 years) and late (no records of clearing). Five plots of 50 x 20 m were established per stage, and the following groups were sampled using specific techniques: rhizobacteria, mycorrhiza, trees and lianas, butterflies, ants, dung beetles, mosquitoes (Culicidae), birds and bats. We also determined soil chemical and physical characteristics and forest structure (tree height, density and basal area). Soil fertility increased along the successional gradient, and the same pattern was observed for all the forest structure variables. However, species richness and composition showed mixed results depending on the organism group. Three groups usually considered as good bioindicators of habitat quality did not differ in species richness and composition between stages: butterflies, ants and dung beetles. On the other hand, rizhobacteria and mycorrhiza differed both in species richness and composition between stages and may be more sensitive to changes in environmental conditions in TDFs. The other five groups differed either in species richness or composition between one or two pairs of successional stages. Although changes in abiotic conditions and forest structure match the predictions of classical successional models, the response of each group of organism is idiosyncratic in terms of diversity and ecological function, as a consequence of specific resource requirements and life-history traits. In general, diversity increased and functional groups changed mostly from early to intermediate-late stages, strengthening the importance of secondary forests to the maintenance of ecosystem integrity of TDFs.

Aggregation of Cricket Activity in Response to Resource Addition Increases Local Diversity.

PubMed

Szinwelski, Neucir; Rosa, Cassiano Sousa; Solar, Ricardo Ribeiro de Castro; Sperber, Carlos Frankl

2015-01-01

Crickets are often found feeding on fallen fruits among forest litter. Fruits and other sugar-rich resources are not homogeneously distributed, nor are they always available. We therefore expect that crickets dwelling in forest litter have a limited supply of sugar-rich resource, and will perceive this and displace towards resource-supplemented sites. Here we evaluate how sugar availability affects cricket species richness and abundance in old-growth Atlantic forest by spraying sugarcane syrup on leaf litter, simulating increasing availability, and collecting crickets via pitfall trapping. We found an asymptotic positive association between resource addition and species richness, and an interaction between resource addition and species identity on cricket abundance, which indicates differential effects of resource addition among cricket species. Our results indicate that 12 of the 13 cricket species present in forest litter are maintained at low densities by resource scarcity; this highlights sugar-rich resource as a short-term driver of litter cricket community structure in tropical forests. When resource was experimentally increased, species richness increased due to behavioral displacement. We present evidence that the density of many species is limited by resource scarcity and, when resources are added, behavioral displacement promotes increased species packing and alters species composition. Further, our findings have technical applicability for increasing sampling efficiency of local cricket diversity in studies aiming to estimate species richness, but with no regard to local environmental drivers or species-abundance characteristics.

Species Composition and Seasonal Distribution of Mosquito Larvae (Diptera: Culicidae) in Southern New Jersey, Burlington County.

PubMed

Verna, Thomas N

2015-09-01

A total of 36,495 larvae consisting of 45 species from 11 genera were collected from 7,189 sites from southern New Jersey, Burlington County between the months of March and October, 2001-2014. Density and seasonal distribution were determined among natural and artificial habitat. The most dominant species collected from natural habitat was Aedes vexans (Meigen) followed by Ochlerotatus canadensis canadensis (Theobald), Culex restuans Theobald, Culex pipiens L., and Culex territans Walker. The most dominant species collected from artificial habitat was Aedes albopictus (Skuse) followed by Ochlerotatus japonicus japonicus (Theobald), Cx. restuans, Cx. pipiens, and Ochlerotatus triseriatus (Say). Cx. restuans and Cx. pipiens were the only species categorized as dominant among both natural and artificial habitat and comprised greater than half the total density. Sympatry was common among dominant species from artificial habitat where a significant percentage of the total collection contained multiple species. The most common types of natural habitats were forested depressions and stream flood plains whereas rimless vehicle tires and various plastic containers were the most common artificial habitats. The pitcher plant Sarracenia purpurea L. was the only habitat exclusive to one species. © The Authors 2015. Published by Oxford University Press on behalf of Entomological Society of America. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Benchmark study on glyphosate-resistant cropping systems in the United States. Part 7: Effects of weed management strategy (grower practices versus academic recommendations) on the weed soil seedbank over 6 years.

PubMed

Gibson, David J; Young, Bryan G; Owen, Micheal D K; Gage, Karla L; Matthews, Joseph L; Jordan, David L; Shaw, David R; Weller, Stephen C; Wilson, Robert G

2016-04-01

Shifts in weed species composition and richness resulting from near-exclusive reliance on herbicides in glyphosate-resistant (GR) cropping systems has necessitated the implementation of alternative weed management tactics to reduce selection pressures of herbicides. We contrasted the response of the weed soil seedbank to effects of weed management strategy, comparing grower practices with academic recommendations for best management practices (BMPs) over 6 years and across five weed hardiness zones in the US Midwest at sites subject to GR cropping systems. Total weed population density and species richness varied according to cropping system, location and prior year's crop, but less so to weed management strategy. The seedbank population density for 11 of the 14 most frequent weed species was affected by weed management strategy either alone or in an interaction with hardiness zone or year, or both. In only 29% of comparisons was weed population density lower following academic recommendations, and this depended upon prior crop and cropping system. The population density of high-risk weed species was reduced by academic recommendations, but only in two of six years and under continuous GR maize. Overall, the weed population density was decreasing in field halves subject to the BMPs in the academic recommendations relative to grower practices. The soil seedbank is slow to respond to academic recommendations to mitigate glyphosate-resistant weeds, but represents a biological legacy that growers need to keep in mind even when management practices reduce emerged field weed population densities. © 2015 Society of Chemical Industry.

Spatial and seasonal variations of fish assemblages in mangrove creek systems in Zanzibar (Tanzania)

NASA Astrophysics Data System (ADS)

Mwandya, Augustine W.; Gullström, Martin; Andersson, Mathias H.; Öhman, Marcus C.; Mgaya, Yunus D.; Bryceson, Ian

2010-11-01

Spatial and seasonal variations of fish assemblage composition were studied in three non-estuarine mangrove creeks of Zanzibar (Tanzania). Fish were collected monthly for one year at three sites (lower, intermediate and upper reaches) in each creek using a seine net (each haul covering 170 m 2). Density, species number and diversity of fish were all higher at sites with dense cover of macrophytes (seagrass and macroalgae) than over unvegetated sandy sites. In general, fish assemblages mainly comprised juveniles of a few abundant taxa, e.g. Mugil cephalus, Mugilidae spp. and Leiognathus equulus at sites with mud substratum and Gerres oyena, Lethrinus harak and Sillago sihama at sites dominated by macrophytes. Multivariate analyses revealed significant separations in fish assemblage composition within the two creeks where the bottom substratum differed among sites. Overall, season seemed to have little effect on density, species number, diversity index ( H') and assemblage structure of fish. Water condition variables were also relatively stable across the season, although a short-term fluctuation primarily induced by decreased salinity, occurred during the heavy rains in April and May. Fish assemblage structure was not significantly affected by any of the abiotic factors tested. However, significant regressions were found between the other fish variables and environmental variables, but since these associations were mostly species-specific and generally inconsistent, we suggest that the overall distribution patterns of fish were mainly an effect of particular substrate preferences of fish species rather than contemporary water conditions.

[Termites (Isoptera) in forest ecosystems of Cat Tien National Park (Southern Vietnam)].

PubMed

Beliaeva, N V; Tiunov, A V

2010-01-01

The species composition and termite community populations were studied and the total land termites biomass was estimated in five forest habitats of Cat Tien National Park, Southern Vietnam. Twenty-four species of two families, Rhinotermitidae (1 species) and Termitidae (23 species), the predominant representatives of the subfamily Macrotermitinae, were found in mounds and in soil samples. On the test plots the density of termite mounds averaged 68 per hectare, primarily the mounds of three Macrotermes species. Destructive sampling allowed estimation of the caste composition and total community biomass based on six termite mounds of the prevailing species (Globitermes sulphureus, Microcerotermes burmanicus, Macrotermes carbonarius, M. gilvus, M. malaccensis, and Hypotermes obscuriceps). The total number of termites in the nests ranged from 65 000 to 3 150 000 individuals with the total biomass ranging from 185 to 2440 g live weight. The total abundance of nesting Macrotermes species alone could conservatively be estimated as 2.5 million individuals and 20.5 kg live weight per hectare. The number of soil- and litter-feeding termites averaged for the test plots was estimated at about 60 ind./m2. Four species dominating on the test plots (M. carbonarius, M. gilvus, M. malaccensis, and H. obscuriceps) belong to active tree litter feeders.

Winter browse selection by white-tailed deer and implications for bottomland forest restoration in the Upper Mississippi River Valley, USA

USGS Publications Warehouse

Cogger, Benjamin J.; De Jager, Nathan R.; Thomsen, Meredith; Adams, Carrie Reinhardt

2014-01-01

White-tailed deer (Odocoileus virginianus) forage selectively, modifying upland forest species composition and in some cases shifting ecosystems to alternative stable states. Few studies, however, have investigated plant selection by deer in bottomland forests. Herbaceous invasive species are common in wetlands and their expansion could be promoted if deer avoid them and preferentially feed on native woody species. We surveyed plant species composition and winter deer browsing in 14 floodplain forest restoration sites along the Upper Mississippi River and tributaries. Tree seedling density declined rapidly with increasing cover of invasive Phalaris arundinacea, averaging less than 1 per m2 in all sites in which the grass was present. Deer browsed ∼46% of available tree seedling stems (branches) at mainland restorations, compared to ∼3% at island sites. Across all tree species, the number of browsed stems increased linearly with the number available and responded unimodally to tree height. Maximum browsing rates were observed on trees with high stem abundances (>10 per plant) and of heights between 50 and 150 cm. Deer preferred Ulmus americana and Acer saccharinum, and avoided Fraxinus pennsylvanica, Acer negundo, and Quercus spp. at mainland sites, and did not browse Phalaris arundinacea if present. Depending on plant growth responses to herbivory and the competitive effects of unbrowsed species, our results suggest that selective foraging could promote the expansion of invasive species and/or alter tree species composition in bottomland forest restorations. Islands may, however, serve as refuges from browsing on a regional scale.

Effects of Metal Phytoextraction Practices on the Indigenous Community of Arbuscular Mycorrhizal Fungi at a Metal-Contaminated Landfill

PubMed Central

Pawlowska, Teresa E.; Chaney, Rufus L.; Chin, Mel; Charvat, Iris

2000-01-01

Phytoextraction involves use of plants to remove toxic metals from soil. We examined the effects of phytoextraction practices with three plant species (Silene vulgaris, Thlaspi caerulescens, and Zea mays) and a factorial variation of soil amendments (either an ammonium or nitrate source of nitrogen and the presence or absence of an elemental sulfur supplement) on arbuscular mycorrhizal (AM) fungi (Glomales, Zygomycetes) at a moderately metal-contaminated landfill located in St. Paul, Minn. Specifically, we tested whether the applied treatments affected the density of glomalean spores and AM root colonization in maize. Glomalean fungi from the landfill were grouped into two morphotypes characterized by either light-colored spores (LCS) or dark-colored spores (DCS). Dominant species of the LCS morphotype were Glomus mosseae and an unidentified Glomus sp., whereas the DCS morphotype was dominated by Glomus constrictum. The density of spores of the LCS morphotype from the phytoremediated area was lower than the density of these spores in the untreated landfill soil. Within the experimental area, spore density of the LCS morphotype in the rhizosphere of mycorrhizal maize was significantly higher than in rhizospheres of nonmycorrhizal S. vulgaris or T. caerulescens. Sulfur supplement increased vesicular root colonization in maize and exerted a negative effect on spore density in maize rhizosphere. We conclude that phytoextraction practices, e.g., the choice of plant species and soil amendments, may have a great impact on the quantity and species composition of glomalean propagules as well as on mycorrhiza functioning during long-term metal-remediation treatments. PMID:10831433

Environmental Control on Fish and Macrocrustacean Spring Community-Structure, on an Intertidal Sandy Beach

PubMed Central

Benazza, Achwak; Selleslagh, Jonathan; Breton, Elsa; Rabhi, Khalef; Cornille, Vincent; Bacha, Mahmoud; Lecuyer, Eric; Amara, Rachid

2015-01-01

The inter-annual variability of the fish and macrocrustacean spring community on an intertidal sandy beach near the Canche estuary (North of France) was studied from 2000 to 2013 based on weekly spring sampling over an 11-year period. Twenty-eight species representing 21 families were collected during the course of the study. The community was dominated by a few abundant species accounting for > 99% of the total species densities. Most individuals caught were young-of-the-year indicating the importance of this ecosystem for juvenile fishes and macrocrustaceans. Although standard qualitative community ecology metrics (species composition, richness, diversity, evenness and similarity) indicated notable stability over the study period, community structure showed a clear change since 2009. Densities of P. platessa, P. microps and A. tobianus decreased significantly since 2009, whereas over the period 2010-2013, the contribution of S. sprattus to total species density increased 4-fold. Co-inertia and generalised linear model analyses identified winter NAO index, water temperature, salinity and suspended particular matter as the major environmental factors explaining these changes. Although the recurrent and dense spring blooms of the Prymnesiophyte Phaeocystis globosa is one of the main potential threats in shallow waters of the eastern English Channel, no negative impact of its temporal change was detected on the fish and macrocrustacean spring community structure. PMID:25617852

Ecological status of high altitude medicinal plants and their sustainability: Lingshi, Bhutan.

PubMed

Lakey; Dorji, Kinley

2016-10-11

Human beings use plants for a multitude of purposes of which a prominent one across the globe is for their medicinal values. Medicinal plants serve as one of the major sources of income for high altitude inhabitants in the Himalaya, particularly in countries like Nepal, and Bhutan. People here harvest huge volumes of medicinal plants indiscriminately, risking their sustainability. This paper attempts to identify some of the priority medicinal plant species harvested in the wild and assess their ecological status for their judicious utilization, and to help provide policy guidance for possible domestication and support strategic conservation frameworks. Out of the 16 priority species identified by the expert group, collectors' perception on ecological status of the priority species differed from survey findings. Chrysosplenium nudicaule (clumps) ranked as most threatened species followed by Corydalis dubia, and Meconopsis simplicifolia. Onosma hookeri, Corydalis crispa and Delphinium glaciale were some of the species ranked as threatened species followed by Halenia elliptica (not in priority list). Percent relative abundance showed irregular pattern of species distribution. High species evenness was recorded among Nardostachys grandiflora, Chrysosplenium nudicaule, Saussurea gossypiphora and Aconitum orochryseum with average species density of 8 plant m -2 . Rhodiola crenulata, and Dactylorhiza hatagirea followed by Meconopsis horridula and Meconopsis simplicifolia were ranked as most threatened species with average species density of 0.4, 0.4, 5.6 and 6.0 plant m -2 , respectively. The most abundant (common) species was Onosma hookeri (plant m -2 ). Species composition and density also differed with vegetation, altitude, slope and its aspects. Priority species identified by expert group were found vulnerable and patchy in distribution. Survey results and collectors' perceptions tally to an extent. Some of the species (Dactylorhiza hatagirea, Rhodiola crenulata, Meconopsis simplicifolia and Meconopsis horridula) were critically low in plant density with less than a plant per m 2 while Delphinium glaciale, Fritillaria delavayi and Aconitum orochryseum were confined to narrow altitude range. Collectors were aware that most species identified in priority list are threatened and existing harvesting plan are hardly implemented as it is not pragmatic. Moreover, major chunk of medicinal plants harvested remain unaccounted as illegal harvest and marketing seemed to occur across the borders. Policing and monitoring would continue to be a challenge given the rugged terrain and harsh climate. In-depth study and further monitoring of low density species is suggested to ensure its sustainability through long term strategy development.

Seed bank and established vegetation in the last remnants of the Mexican Central Plateau wetlands: the Lerma marshes.

PubMed

Zepeda, Carmen; Lot, Antonio; Nemiga, Xanat Antonio; Manjarrez, Javier

2014-06-01

Seed banks play a central role in vegetation dynamics of many wetlands. Therefore, knowledge of seed reservoirs in the soils of aquatic communities should provide useful tools for conservation and restoration efforts. This study was conducted in the Lerma marshes, one of the last remnants of the vast wetlands that were once in the Mexican Central Plateau. The main objective was to determine the composition and abundance of seed bank and its relationship with established vegetation of the three Lerma marshes. In each marsh, we systematically selected 18 to 40 sampling sites. In each site, the composition of vascular plant vegetation was evaluated in two 10m lines perpendicular to the shore. Every 0.5m, we determined the coverage of species by measuring the intercepted length for each plant or group of plants. At each sampling site where we had evaluated the established vegetation, we collected a sample of the top 10cm of sediment; the soil cores were divided into an upper layer (0-5cm) and a lower layer (5-10cm). These samples were used to evaluate the seed bank by the seedling emergence method. All samples were placed in a greenhouse at 20-25 degrees C and remained flooded for 15 weeks. Forty-nine species were recorded in the vegetation. Chiconahuapan had the richest and most diverse flora and the greatest number of perennial species. A life-forms analysis showed that perennial herbs, especially rooted-emergent hydrophytes, dominated in the three wetlands. Sixty-one species were identified in the total seed bank; Chimaliapan had the most diverse total seed bank, whereas the mean seedling density was higher in Chignahuapan. Only two species of the total seed bank of each marsh had a density greater than 10% of the total, and more than half were uncommon. The upper layer of sediment (0-5cm) contained two times more seeds/m2 and species per sample than the lower layer (5-10cm), and there was a significant decrease of seed density with depth. The detrended correspondence analysis produced a clear separation between the composition of the seed banks and established vegetation. In general, in each marsh there was less species diversity in the established vegetation than in the seed bank. Dominance by a few species in the seed bank, the presence of opportunistic species, and the low representation of established species in the seed bank suggest wetland degradation and a low probability of regenerating the natural communities from the seed bank. To ensure the permanence of these marshes, their biodiversity, and therefore the environmental services they provide, up to date planning is a must, and efforts to control and monitor hydrology, water quality, and the influence of human activities are suggested.

Bidirectional recovery patterns of Mojave Desert vegetation in an aqueduct pipeline corridor after 36 years: II. Annual plants

USGS Publications Warehouse

Berry, Kristin H.; Mack, Jeremy S.; Weigand, James F.; Gowan, Timothy A.; LaBerteaux, Denise

2015-01-01

We studied recovery of winter annual plants in a 97-m wide disturbed aqueduct corridor in the Mojave Desert 36 years after construction. We established plots at 0, 20, and 40 m from the road verge at the corridor center and at 100 m in undisturbed vegetation. We recorded 47 annual species, of which 41 were native and six were exotic. Exotic species composed from 64 to 91% of total biomass. We describe a bilateral process of recovery: from the road verge to the outward edge of the corridor and from undisturbed habitat into the corridor. Native annual plants significantly increased in richness from road verge to undisturbed vegetation, but not in density, biomass, or cover. In contrast, exotic annual plants increased in density, biomass, cover and richness with increasing distance from the road verge. The species of colonizing shrubs and type of canopy cover affected density, biomass, and richness of annuals. Species composition of native annuals differed significantly by distance, suggesting secondary succession. In general, native annuals were closer to achieving recovery on the 40-m plots than at the road verge. Recovery estimates were in centuries and dependent on location, canopy type, and whether considering all annuals or natives only.

Effect of culture density on production characteristics and body composition of market size cobia reared from juveniles in recirculating aquaculture systems

USDA-ARS?s Scientific Manuscript database

Interest regarding cobia Rachycentron canadum aquaculture in the US has increased greatly in the last decade due to their excellent consumer appeal, extremely rapid growth rates, and the observed success of rearing this species in Taiwan and other southeastern Asian countries. Because the principal...

Interactions between white-tailed deer density and the composition of forest understories in the northern United States

Treesearch

Matthew B. Russell; Christopher W. Woodall; Kevin M. Potter; Brian F. Walters; Grant M. Domke; Christopher M. Oswalt

2017-01-01

Forest understories across the northern United States (US) are a complex of tree seedlings, endemic forbs, herbs, shrubs, and introduced plant species within a forest structure defined by tree and forest floor attributes. The substantial increase in white-tailed deer (Odocoileus virginianus Zimmerman) populations over the past decades has resulted...

A 3D stand generator for central Appalachian hardwood forests

Treesearch

Jingxin Wang; Yaoxiang Li; Gary W. Miller

2002-01-01

A 3-dimensional (3D) stand generator was developed for central Appalachian hardwood forests. It was designed for a harvesting simulator to examine the interactions of stand, harvest, and machine. The Component Object Model (COM) was used to design and implement the program. Input to the generator includes species composition, stand density, and spatial pattern. Output...

Sinergia sostenida: las polillas y el Dr. Wolcott

Treesearch

Frank H. Wadsworth

2007-01-01

The synergy between an insect colony and a curious entomologist is described. Together they determine the relative preference of insects to over 80 woody species. The relationship between wood resistance and insect attacks and wood density and chemical composition of wood is also determined. Finally, a series of chemicals is tested to increase wood resistance to attack...

Ion Implantation Metallurgy: A Study of the Composition, Structure and Corrosion Behavior of Surface Alloys Formed by Ion Implantation.

DTIC Science & Technology

1980-04-01

spots are due to the " phase ). Dark field imaging of the a" phase shows a large density of small precipitates uniformly distributed in the ferrite . In...density of defect structures and small precipitates of Fe 16N2 (a"). Although there exists some evidence of martensitic transformation in aged speci...implantation into 304 stainless steel ha-s been shown to produce a micro- crystalline surface alloy saturated with P. Combined electrochemical and XPS studies

Depth related trends in proximate composition of demersal fishes in the eastern North Pacific

NASA Astrophysics Data System (ADS)

Drazen, J. C.

2007-02-01

The proximate chemistry of the white muscle and liver of 18 species of demersal fish from the eastern North Pacific was studied to determine trends with depth, locomotory mode and buoyancy mechanism, foraging strategy and to elucidate energetic strategies. Data for 24 species from shallow water were taken from the literature and included for analysis of muscle water content. Benthopelagic species, primarily gadiforms, have significantly larger lipid-rich livers than benthic species. The benthopelagic species may use this lipid to add buoyancy, but it is also used as energy storage. Buoyancy mechanism was directly related to proximate composition. Fishes using gasbladders had normal muscle composition. The two species of benthopelagic fishes without gasbladders have either very high muscle lipid content ( Anoplopoma fimbria) or gelatinous muscle ( Alepocephalus tenobrosus) to aid in achieving neutral buoyancy. The macrourid, Albatrossia pectoralis, has a very small gasbladder and also has gelatinous muscle. Both of these benthopelagic fishes with gelatinous muscle feed on pelagic organisms. Gelatinous muscle was also found in two flatfishes that inhabit the oxygen minimum zone. For these fishes, high water content may serve to lower metabolic costs while maintaining large body size. Scavengers such as Coryphaenoides armatus and Coryphaenoides acrolepis have lipid rich livers and others such as A. fimbria and Pachycara sp. have high and variable muscle lipid content. Thus foraging mode also acts to influence proximate composition. Several depth-related trends in proximate composition were found. White muscle water content increased significantly with depth, and all four gelatinous species occurred at bathyal depths. This adds evidence in support of the hypothesis that decreasing light levels shorten reactive distances and relax the selective pressure for high locomotory capacity. In addition significant declines in liver protein content were observed, suggesting that the rates of metabolism in this organ also decline with depth. There was little evidence for food availability affecting proximate composition. There were no significant changes in either muscle or liver lipid or caloric density with depth. Total lipid stores actually increased significantly, but they were driven primarily by the abyssal scavenger C. armatus suggesting that foraging strategy rather than depth may be the most important factor determining total lipid stores.

Investigating the Martian Ionospheric Conductivity Using MAVEN Key Parameter Data

NASA Astrophysics Data System (ADS)

Aleryani, O.; Raftery, C. L.; Fillingim, M. O.; Fogle, A. L.; Dunn, P.; McFadden, J. P.; Connerney, J. E. P.; Mahaffy, P. R.; Ergun, R. E.; Andersson, L.

2015-12-01

Since the Viking orbiters and landers in 1976, the Martian atmospheric composition has scarcely been investigated. New data from the Mars Atmosphere and Volatile EvolutioN (MAVEN) mission, launched in 2013, allows for a thorough study of the electrically conductive nature of the Martian ionosphere. Determinations of the electrical conductivity will be made using in-situ atmospheric and ionospheric measurements, rather than scientific models for the first time. The objective of this project is to calculate the conductivity of the Martian atmosphere, whenever possible, throughout the trajectory of the MAVEN spacecraft. MAVEN instrumentation used includes the Neutral Gas and Ion Mass Spectrometer (NGIMS) for neutral species density, the Suprathermal and Thermal Ion Compositions (STATIC) for ion composition, temperature and density, the Magnetometer (MAG) for the magnetic field strength and the Langmuir Probe and Waves (LPW) for electron temperature and density. MAVEN key parameter data are used for these calculations. We compare our results with previous, model-based estimates of the conductivity. These results will allow us to quantify the flow of atmospheric electric currents which can be analyzed further for a deeper understanding of the Martian ionospheric electrodynamics, bringing us closer to understanding the mystery of the loss of the Martian atmosphere.

Taxonomic and ecological relevance of the chlorophyll a fluorescence signature of tree species in mixed European forests.

PubMed

Pollastrini, Martina; Holland, Vera; Brüggemann, Wolfgang; Bruelheide, Helge; Dănilă, Iulian; Jaroszewicz, Bogdan; Valladares, Fernando; Bussotti, Filippo

2016-10-01

The variability of chlorophyll a fluorescence (ChlF) parameters of forest tree species was investigated in 209 stands belonging to six European forests, from Mediterranean to boreal regions. The modifying role of environmental factors, forest structure and tree diversity (species richness and composition) on ChlF signature was analysed. At the European level, conifers showed higher potential performance than broadleaf species. Forests in central Europe performed better than those in Mediterranean and boreal regions. At the site level, homogeneous clusters of tree species were identified by means of a principal component analysis (PCA) of ChlF parameters. The discrimination of the clusters of species was influenced by their taxonomic position and ecological characteristics. The species richness influenced the tree ChlF properties in different ways depending on tree species and site. Tree species and site also affected the relationships between ChlF parameters and other plant functional traits (specific leaf area, leaf nitrogen content, light-saturated photosynthesis, wood density, leaf carbon isotope composition). The assessment of the photosynthetic properties of tree species, by means of ChlF parameters, in relation to their functional traits, is a relevant issue for studies in forest ecology. The connections of data from field surveys with remotely assessed parameters must be carefully explored. © 2016 The Authors. New Phytologist © 2016 New Phytologist Trust.

Bird community response to filter strips in Maryland

USGS Publications Warehouse

Blank, P.J.; Dively, G.P.; Gill, D.E.; Rewa, C.A.

2011-01-01

Filter strips are strips of herbaceous vegetation planted along agricultural field margins adjacent to streams or wetlands and are designed to intercept sediment, nutrients, and agrichemicals. Roughly 16,000 ha of filter strips have been established in Maryland through the United States Department of Agriculture's Conservation Reserve Enhancement Program. Filter strips often represent the only uncultivated herbaceous areas on farmland in Maryland and therefore may be important habitat for early-successional bird species. Most filter strips in Maryland are planted to either native warm-season grasses or cool-season grasses and range in width from 10.7 m to 91.4 m. From 2004 to 2007 we studied the breeding and wintering bird communities in filter strips adjacent to wooded edges and non-buffered field edges and the effect that grass type and width of filter strips had on bird community composition. We used 5 bird community metrics (total bird density, species richness, scrub-shrub bird density, grassland bird density, and total avian conservation value), species-specific densities, nest densities, and nest survival estimates to assess the habitat value of filter strips for birds. Breeding and wintering bird community metrics were greater in filter strips than in non-buffered field edges but did not differ between cool-season and warm-season grass filter strips. Most breeding bird community metrics were negatively related to the percent cover of orchardgrass (Dactylis glomerata) in ???1 yr. Breeding bird density was greater in narrow (60 m) filter strips. Our results suggest that narrow filter strips adjacent to wooded edges can provide habitat for many bird species but that wide filter strips provide better habitat for grassland birds, particularly obligate grassland species. If bird conservation is an objective, avoid planting orchardgrass in filter strips and reduce or eliminate orchardgrass from filter strips through management practices. Copyright ?? 2011 The Wildlife Society.

Shifts of community composition and population density substantially affect ecosystem function despite invariant richness.

PubMed

Spaak, Jurg W; Baert, Jan M; Baird, Donald J; Eisenhauer, Nico; Maltby, Lorraine; Pomati, Francesco; Radchuk, Viktoriia; Rohr, Jason R; Van den Brink, Paul J; De Laender, Frederik

2017-10-01

There has been considerable focus on the impacts of environmental change on ecosystem function arising from changes in species richness. However, environmental change may affect ecosystem function without affecting richness, most notably by affecting population densities and community composition. Using a theoretical model, we find that, despite invariant richness, (1) small environmental effects may already lead to a collapse of function; (2) competitive strength may be a less important determinant of ecosystem function change than the selectivity of the environmental change driver and (3) effects on ecosystem function increase when effects on composition are larger. We also present a complementary statistical analysis of 13 data sets of phytoplankton and periphyton communities exposed to chemical stressors and show that effects on primary production under invariant richness ranged from -75% to +10%. We conclude that environmental protection goals relying on measures of richness could underestimate ecological impacts of environmental change. © 2017 The Authors Ecology Letters published by CNRS and John Wiley & Sons Ltd.

Altitudinal and Seasonal Variation in Drosophila Species on Mount Japfu of Nagaland, a Sub-Himalayan Hilly State of India

PubMed Central

Achumi, Bovito; Hegde, Shridhar N.; Lal, Pardeshi; Yenisetti, Sarat Chandra

2013-01-01

Drosophila (L.) (Diptera: Drosophilidae) has richly contributed to the understanding of patterns of inheritance, variation, speciation, and evolution. Drosophila, with its cosmopolitan nature and complexities in species compositions, is an excellent model for studying the eco-distributional patterns of various species. This study analyzed the altitudinal and seasonal variation in Drosophila species of Mount Japfu in Nagaland, a sub-Himalayan hilly state of northeast India, over the course of one year. A total of 4,680 Drosophila flies belonging to 19 species of 4 subgenera were collected at altitudes of 1500, 1800, 2100, 2400, and 2700 m a.s.l. The subgenus Sophophora Sturtevant was predominant, with 10 species, followed by subgenus Drosophila, with 4 species. Subgenus Dorsilopha and subgenus Scaptodrosophila were represented by 1 species each. The remaining 3 species were not identified. Cluster analysis and constancy methods were used to analyze the species occurrence qualitatively. Altitudinal changes in the population densities and relative abundances of the different species at different seasons were also studied. The diversity of the Drosophila community was assessed by applying Simpson's diversity index. At 1800 m a.s.l., the Simpson's index was low (0.09301), suggesting high Drosophila diversity at this altitude. The density of Drosophila changed significantly during different seasons (F = 26.72; df = 2; p < 0.0001). The results suggest the distributional pattern of a species or related group of species was uneven in space and time. PMID:24773245

Seasonal comparison of aquatic macroinvertebrate assemblages in a flooded coastal freshwater marsh

USGS Publications Warehouse

Kang, Sung-Ryong; King, Sammy L.

2013-01-01

Marsh flooding and drying may be important factors affecting aquatic macroinvertebrate density and distribution in coastal freshwater marshes. Limited availability of water as a result of drying in emergent marsh may decrease density, taxonomic diversity, and taxa richness. The principal objectives of this study are to characterize the seasonal aquatic macroinvertebrate assemblage in a freshwater emergent marsh and compare aquatic macroinvertebrate species composition, density, and taxonomic diversity to that of freshwater marsh ponds. We hypothesize that 1) freshwater emergent marsh has lower seasonal density and taxonomic diversity compared to that of freshwater marsh ponds; and 2) freshwater emergent marsh has lower taxa richness than freshwater marsh ponds. Seasonal aquatic macroinvertebrate density in freshwater emergent marsh ranged from 0 organisms/m2 (summer 2009) to 91.1 ± 20.53 organisms/m2 (mean ± SE; spring 2009). Density in spring was higher than in all other seasons. Taxonomic diversity did not differ and there were no unique species in the freshwater emergent marsh. Our data only partially support our first hypothesis as aquatic macroinvertebrate density and taxonomic diversity between freshwater emergent marsh and ponds did not differ in spring, fall, and winter but ponds supported higher macroinvertebrate densities than freshwater emergent marsh during summer. However, our data did not support our second hypothesis as taxa richness between freshwater emergent marsh and ponds did not statistically differ.

Intensive removal of signal crayfish (Pacifastacus leniusculus) from rivers increases numbers and taxon richness of macroinvertebrate species.

PubMed

Moorhouse, Tom P; Poole, Alison E; Evans, Laura C; Bradley, David C; Macdonald, David W

2014-02-01

Invasive species are a major cause of species extinction in freshwater ecosystems, and crayfish species are particularly pervasive. The invasive American signal crayfish Pacifastacus leniusculus has impacts over a range of trophic levels, but particularly on benthic aquatic macroinvertebrates. Our study examined the effect on the macroinvertebrate community of removal trapping of signal crayfish from UK rivers. Crayfish were intensively trapped and removed from two tributaries of the River Thames to test the hypothesis that lowering signal crayfish densities would result in increases in macroinvertebrate numbers and taxon richness. We removed 6181 crayfish over four sessions, resulting in crayfish densities that decreased toward the center of the removal sections. Conversely in control sections (where crayfish were trapped and returned), crayfish density increased toward the center of the section. Macroinvertebrate numbers and taxon richness were inversely correlated with crayfish densities. Multivariate analysis of the abundance of each taxon yielded similar results and indicated that crayfish removals had positive impacts on macroinvertebrate numbers and taxon richness but did not alter the composition of the wider macroinvertebrate community. Synthesis and applications: Our results demonstrate that non-eradication-oriented crayfish removal programmes may lead to increases in the total number of macroinvertebrates living in the benthos. This represents the first evidence that removing signal crayfish from riparian systems, at intensities feasible during control attempts or commercial crayfishing, may be beneficial for a range of sympatric aquatic macroinvertebrates.

Intensive removal of signal crayfish (Pacifastacus leniusculus) from rivers increases numbers and taxon richness of macroinvertebrate species

PubMed Central

Moorhouse, Tom P; Poole, Alison E; Evans, Laura C; Bradley, David C; Macdonald, David W

2014-01-01

Invasive species are a major cause of species extinction in freshwater ecosystems, and crayfish species are particularly pervasive. The invasive American signal crayfish Pacifastacus leniusculus has impacts over a range of trophic levels, but particularly on benthic aquatic macroinvertebrates. Our study examined the effect on the macroinvertebrate community of removal trapping of signal crayfish from UK rivers. Crayfish were intensively trapped and removed from two tributaries of the River Thames to test the hypothesis that lowering signal crayfish densities would result in increases in macroinvertebrate numbers and taxon richness. We removed 6181 crayfish over four sessions, resulting in crayfish densities that decreased toward the center of the removal sections. Conversely in control sections (where crayfish were trapped and returned), crayfish density increased toward the center of the section. Macroinvertebrate numbers and taxon richness were inversely correlated with crayfish densities. Multivariate analysis of the abundance of each taxon yielded similar results and indicated that crayfish removals had positive impacts on macroinvertebrate numbers and taxon richness but did not alter the composition of the wider macroinvertebrate community. Synthesis and applications: Our results demonstrate that non-eradication-oriented crayfish removal programmes may lead to increases in the total number of macroinvertebrates living in the benthos. This represents the first evidence that removing signal crayfish from riparian systems, at intensities feasible during control attempts or commercial crayfishing, may be beneficial for a range of sympatric aquatic macroinvertebrates. PMID:24634733

Dynamics of vesicular-arbuscular mycorrhizae during old field succession.

PubMed

Johnson, Nancy Collins; Zak, Donald R; Tilman, David; Pfleger, F L

1991-05-01

The species composition of vesicular-arbuscular mycorrhizal (VAM) fungal communities changed during secondary succession of abandoned fields based on a field to forest chronosequence. Twenty-five VAM fungal species were identified. Seven species were clearly early successional and five species were clearly late successional. The total number of VAM fungal species did not increase with successional time, but diversity as measured by the Shannon-Wiener index tended to increase, primarily because the community became more even as a single species, Glomus aggregatum, became less dominant in the older sites. Diversity of the VAM fungal community was positively correlated with soil C and N. The density of VAM fungi, as measured by infectivity and total spore count, first increased with time since abandonment and then decreased in the late successional forest sites. Within 12 abandoned fields, VAM fungal density increased with increasing soil pH, H 2 O soluble soil C, and root biomass, but was inversely related to extractable soil P and percent cover of non-host plant species. The lower abundance of VAM fungi in the forest sites compared with the field sites agrees with the findings of other workers and corresponds with a shift in the dominant vegetation from herbaceous VAM hosts to woody ectomycorrhizal hosts.

Subcritical and supercritical fuel injection and mixing in single and binary species systems

NASA Astrophysics Data System (ADS)

Roy, Arnab

Subcritical and supercritical fluid injection using a single round injector into a quiescent atmosphere comprising single and binary species was investigated using optical diagnostics. Different disintegration and mixing modes are expected for the two cases. In the binary species case, the atmosphere comprised an inert gas of a different composition than that of the injected fluid. In single species case, the atmosphere consisted of the same species as that of the injected fluid. Density values were quantified and density gradient profiles were inferred from the experimental data. A novel method was applied for the detection of detailed structures throughout the entire jet center plane. Various combinations of injectant and chamber conditions were tested and a wide range of density ratios were covered. The subcritical cases demonstrated the importance of surface tension and inertial forces, while the supercritical cases showed no signs of surface tension and, in most situations, resembled the mixing characteristics of a gaseous jet injected into a gaseous environment. A comparison between the single and binary species systems has also been provided. A detailed laser calibration procedure was undertaken to account for the laser absorption through the gas and liquid phases and for fluorescence in the non-linear excitation regime for high laser pulse energy. Core lengths were measured for binary species cases and correlated with visualization results. An eigenvalue approach was taken to determine the location of maximum gradients for determining the core length. Jet divergence angles were also calculated and were found to increase with chamber-to-injectant density ratio for both systems. A model was proposed for the spreading angle dependence on density ratio for both single and binary species systems and was compared to existing theoretical studies and experimental work. Finally, a linear stability analysis was performed for the jet injected into both subcritical and supercritical atmospheres. The subcritical cases showed good correlation with previous and current experimental results. The supercritical solutions, which have not yet been solved earlier by researchers, are found here through an asymptotic solution of the dispersion equation for exceedingly high Weber numbers.

Genetic variation in foundation species governs the dynamics of trophic interactions

PubMed Central

Valencia-Cuevas, Leticia; Mussali-Galante, Patricia; Cano-Santana, Zenón; Pujade-Villar, Juli; Equihua-Martínez, Armando

2018-01-01

Abstract Various studies have demonstrated that the foundation species genetic diversity can have direct effects that extend beyond the individual or population level, affecting the dependent communities. Additionally, these effects may be indirectly extended to higher trophic levels throughout the entire community. Quercus castanea is an oak species with characteristics of foundation species beyond presenting a wide geographical distribution and being a dominant element of Mexican temperate forests. In this study, we analyzed the influence of population (He) and individual (HL) genetic diversity of Q. castanea on its canopy endophagous insect community and associated parasitoids. Specifically, we studied the composition, richness (S) and density of leaf-mining moths (Lepidoptera: Tischeridae, Citheraniidae), gall-forming wasps (Hymenoptera: Cynipidae), and canopy parasitoids of Q. castanea. We sampled 120 trees belonging to six populations (20/site) through the previously recognized gradient of genetic diversity. In total, 22 endophagous insect species belonging to three orders (Hymenoptera, Lepidoptera, and Diptera) and 20 parasitoid species belonging to 13 families were identified. In general, we observed that the individual genetic diversity of the host plant (HL) has a significant positive effect on the S and density of the canopy endophagous insect communities. In contrast, He has a significant negative effect on the S of endophagous insects. Additionally, indirect effects of HL were observed, affecting the S and density of parasitoid insects. Our results suggest that genetic variation in foundation species can be one of the most important factors governing the dynamics of tritrophic interactions that involve oaks, herbivores, and parasitoids. PMID:29492034

A multi-species exchange model for fully fluctuating polymer field theory simulations.

PubMed

Düchs, Dominik; Delaney, Kris T; Fredrickson, Glenn H

2014-11-07

Field-theoretic models have been used extensively to study the phase behavior of inhomogeneous polymer melts and solutions, both in self-consistent mean-field calculations and in numerical simulations of the full theory capturing composition fluctuations. The models commonly used can be grouped into two categories, namely, species models and exchange models. Species models involve integrations of functionals that explicitly depend on fields originating both from species density operators and their conjugate chemical potential fields. In contrast, exchange models retain only linear combinations of the chemical potential fields. In the two-component case, development of exchange models has been instrumental in enabling stable complex Langevin (CL) simulations of the full complex-valued theory. No comparable stable CL approach has yet been established for field theories of the species type. Here, we introduce an extension of the exchange model to an arbitrary number of components, namely, the multi-species exchange (MSE) model, which greatly expands the classes of soft material systems that can be accessed by the complex Langevin simulation technique. We demonstrate the stability and accuracy of the MSE-CL sampling approach using numerical simulations of triblock and tetrablock terpolymer melts, and tetrablock quaterpolymer melts. This method should enable studies of a wide range of fluctuation phenomena in multiblock/multi-species polymer blends and composites.

A multi-species framework for landscape conservation planning

USGS Publications Warehouse

Schwenk, W. Scott; Donovan, Therese

2011-01-01

 Rapidly changing landscapes have spurred the need for quantitative methods for conservation assessment and planning that encompass large spatial extents. We devised and tested a multispecies framework for conservation planning to complement single-species assessments and ecosystem-level approaches. Our framework consisted of 4 elements: sampling to effectively estimate population parameters, measuring how human activity affects landscapes at multiple scales, analyzing the relation between landscape characteristics and individual species occurrences, and evaluating and comparing the responses of multiple species to landscape modification. We applied the approach to a community of terrestrial birds across 25,000 km2 with a range of intensities of human development. Human modification of land cover, road density, and other elements of the landscape, measured at multiple spatial extents, had large effects on occupancy of the 67 species studied. Forest composition within 1 km of points had a strong effect on occupancy of many species and a range of negative, intermediate, and positive associations. Road density within 1 km of points, percent evergreen forest within 300 m, and distance from patch edge were also strongly associated with occupancy for many species. We used the occupancy results to group species into 11 guilds that shared patterns of association with landscape characteristics. Our multispecies approach to conservation planning allowed us to quantify the trade-offs of different scenarios of land-cover change in terms of species occupancy.

Facilitation in Caribbean coral reefs: high densities of staghorn coral foster greater coral condition and reef fish composition.

PubMed

Huntington, Brittany E; Miller, Margaret W; Pausch, Rachel; Richter, Lee

2017-05-01

Recovery of the threatened staghorn coral (Acropora cervicornis) is posited to play a key role in Caribbean reef resilience. At four Caribbean locations (including one restored and three extant populations), we quantified characteristics of contemporary staghorn coral across increasing conspecific densities, and investigated a hypothesis of facilitation between staghorn coral and reef fishes. High staghorn densities in the Dry Tortugas exhibited significantly less partial mortality, higher branch growth, and supported greater fish abundances compared to lower densities within the same population. In contrast, partial mortality, branch growth, and fish community composition did not vary with staghorn density at the three other study locations where staghorn densities were lower overall. This suggests that density-dependent effects between the coral and fish community may only manifest at high staghorn densities. We then evaluated one facilitative mechanism for such density-dependence, whereby abundant fishes sheltering in dense staghorn aggregations deliver nutrients back to the coral, fueling faster coral growth, thereby creating more fish habitat. Indeed, dense staghorn aggregations within the Dry Tortugas exhibited significantly higher growth rates, tissue nitrogen, and zooxanthellae densities than sparse aggregations. Similarly, higher tissue nitrogen was induced in a macroalgae bioassay outplanted into the same dense and sparse aggregations, confirming greater bioavailability of nutrients at high staghorn densities. Our findings inform staghorn restoration efforts, suggesting that the most effective targets may be higher coral densities than previously thought. These coral-dense aggregations may reap the benefits of positive facilitation between the staghorn and fish community, favoring the growth and survivorship of this threatened species.

Effects of Water Level on Three Wetlands Soil Seed Banks on the Tibetan Plateau

PubMed Central

Ma, Miaojun; Ma, Zhen; Du, Guozhen

2014-01-01

Background Although the effect of water level on germination in soil seed banks has been documented in many ecosystems, the mechanism is not fully understood, and to date no empirical studies on this subject exist. Further, no work has been done on the effect of water level on seed banks of drying and saline-alkaline wetlands in alpine areas on the Tibetan Plateau. Methodology We examined the effects of water level (0 cm, 5 cm and 10 cm) on seed germination and seedling establishment from soil seed banks at 0–5 cm and 5–10 cm depths in typical, drying, and saline-alkaline wetlands. We also explore the potential role of soil seed bank in restoration of drying and saline-alkaline wetlands. Principal Findings Species richness decreased with increase in water level, but there almost no change in seed density. A huge difference exists in species composition of the seed bank among different water levels in all three wetlands, especially between 0 cm and 5 cm and 0 cm and 10 cm. Similarity of species composition between seed bank and plant community was higher in 0 cm water level in drying wetland than in the other two wetlands. The similarity was much higher in 0 cm water level than in 5 cm and 10 cm water levels in all three wetlands. Species composition of the alpine wetland plant community changed significantly after drying and salinization, however, species composition of the seed bank was unchanged regardless of the environment change. Conclusions/Significance Water level greatly affects seed bank recruitment and plant community establishment. Further, different water levels in restored habitats are likely to determine its species composition of the plant community. The seed bank is important in restoration of degraded wetlands. Successful restoration of drying and salinization wetlands could depend on the seed bank. PMID:24984070

Soil, vegetation, and seed bank of a Sonoran Desert ecosystem along an exotic plant (Pennisetum ciliare) treatment gradient.

PubMed

Abella, Scott R; Chiquoine, Lindsay P; Backer, Dana M

2013-10-01

Ecological conditions following removal of exotic plants are a key part of comprehensive environmental management strategies to combat exotic plant invasions. We examined ecological conditions following removal of the management-priority buffelgrass (Pennisetum ciliare) in Saguaro National Park of the North American Sonoran Desert. We assessed soil, vegetation, and soil seed banks on seven buffelgrass site types: five different frequencies of buffelgrass herbicide plus hand removal treatments (ranging from 5 years of annual treatment to a single year of treatment), untreated sites, and non-invaded sites, with three replicates for each of the seven site types. The 22 measured soil properties (e.g., pH) differed little among sites. Regarding vegetation, buffelgrass cover was low (≤1% median cover), or absent, across all treated sites but was high (10-70%) in untreated sites. Native vegetation cover, diversity, and composition were indistinguishable across site types. Species composition was dominated by native species (>93% relative cover) across all sites except untreated buffelgrass sites. Most (38 species, 93%) of the 41 species detected in soil seed banks were native, and native seed density did not differ significantly across sites. Results suggest that: (1) buffelgrass cover was minimal across treated sites; (2) aside from high buffelgrass cover in untreated sites, ecological conditions were largely indistinguishable across sites; (3) soil seed banks harbored ≥12 species that were frequent in the aboveground vegetation; and (4) native species dominated post-treatment vegetation composition, and removing buffelgrass did not result in replacement by other exotic species.

Soil, Vegetation, and Seed Bank of a Sonoran Desert Ecosystem Along an Exotic Plant ( Pennisetum ciliare) Treatment Gradient

NASA Astrophysics Data System (ADS)

Abella, Scott R.; Chiquoine, Lindsay P.; Backer, Dana M.

2013-10-01

Ecological conditions following removal of exotic plants are a key part of comprehensive environmental management strategies to combat exotic plant invasions. We examined ecological conditions following removal of the management-priority buffelgrass ( Pennisetum ciliare) in Saguaro National Park of the North American Sonoran Desert. We assessed soil, vegetation, and soil seed banks on seven buffelgrass site types: five different frequencies of buffelgrass herbicide plus hand removal treatments (ranging from 5 years of annual treatment to a single year of treatment), untreated sites, and non-invaded sites, with three replicates for each of the seven site types. The 22 measured soil properties (e.g., pH) differed little among sites. Regarding vegetation, buffelgrass cover was low (≤1 % median cover), or absent, across all treated sites but was high (10-70 %) in untreated sites. Native vegetation cover, diversity, and composition were indistinguishable across site types. Species composition was dominated by native species (>93 % relative cover) across all sites except untreated buffelgrass sites. Most (38 species, 93 %) of the 41 species detected in soil seed banks were native, and native seed density did not differ significantly across sites. Results suggest that: (1) buffelgrass cover was minimal across treated sites; (2) aside from high buffelgrass cover in untreated sites, ecological conditions were largely indistinguishable across sites; (3) soil seed banks harbored ≥12 species that were frequent in the aboveground vegetation; and (4) native species dominated post-treatment vegetation composition, and removing buffelgrass did not result in replacement by other exotic species.

Development of 3D Urchin-Shaped Coaxial Manganese Dioxide@Polyaniline (MnO2@PANI) Composite and Self-Assembled 3D Pillared Graphene Foam for Asymmetric All-Solid-State Flexible Supercapacitor Application.

PubMed

Ghosh, Kalyan; Yue, Chee Yoon; Sk, Md Moniruzzaman; Jena, Rajeeb Kumar

2017-05-10

We have fabricated high-energy-density all-solid-state flexible asymmetric supercapacitor by using a facile novel 3D hollow urchin-shaped coaxial manganese dioxide@polyaniline (MnO 2 @PANI) composite as positive electrode and 3D graphene foam (GF) as negative electrode materials with polyvinyl alcohol (PVA)/KOH gel electrolyte. The coaxial MnO 2 @PANI composite was fabricated by hydrothermal route followed by oxidation without use of an external oxidant. The formation mechanism of the 3D hollow MnO 2 @PANI composite occurs first by nucleation and growth of the MnO 2 crystal species via dissolution-recrystallization and oriented attachment mechanisms followed by the oxidation of aniline monomers on the MnO 2 crystalline template. The self-assembled 3D graphene block was synthesized by hydrothermal route using vitamin C as a reducing agent. The microstructures of the composites are analyzed by X-ray diffraction (XRD), X-ray photoelectron spectroscopy (XPS), and Raman spectroscopy. The morphology is characterized by field-emission scanning electron microscopy (FESEM) and transmission electron microscopy (TEM), which clearly showed the formation of urchin-shaped coaxial MnO 2 @PANI composite. The electrochemical studies are explored by cyclic voltammetry, electrochemical impedance spectrometry, and cyclic charge-discharge tests. The symmetric all-solid-state flexible MnO 2 @PANI//MnO 2 @PANI and GF//GF supercapacitors exhibit the specific capacitance of 129.2 and 82.1 F g -1 at 0.5 A/g current density, respectively. The solid-state asymmetric supercapacitor shows higher energy density (37 Wh kg -1 ) with respect to the solid-state symmetric supercapacitors MnO 2 @PANI//MnO 2 @PANI and GF//GF, where the obtained energy density are found to be 17.9 and 11.4 Wh kg -1 , respectively, at 0.5 A/g current density. Surprisingly, the asymmetric supercapacitor shows a high energy density of 22.3 Wh kg -1 at a high current density of 5 A g -1 . The solid-state asymmetric supercapacitor shows a good cyclic stability in which ∼11% capacitance loss was observed after 5000 cycles.

Effects of copper on composition species of periphyton in a Sierra Nevada, California, stream.

USGS Publications Warehouse

Leland, H.V.; Carter, J.L.

1984-01-01

An oligotrophic stream was continuously dosed for 1 yr at 2.5, 5 and 10 mu g l-1 CuT; c12, 25 and 50 ng l-1 Cu2+. The numerically most abundant taxa were Bacillariophyceae (Achnanthes minutissima, Cocconeis placentula, Cymbella microcephala, C. sinuata, Fragilaria construens, F. crotonensis, Navicula spp., Synedra acus and S. rumpens), and the Cyanophyta Lyngbya spp., a co-dominant during spring and summer. Population densities of Lyngbya spp. were markedly reduced at all Cu concentrations. Population densities of the principal Chlorophyta (Spirogyra spp., Cladophora spp.) and the diatom Amphipleura pellucida were reduced at 5 mu g l-1 CuT. Of the 22 most abundant taxa, 16 were reduced in abundance by continuous exposure to 10 mu g l-1 CuT. There was no commensurate reduction in standing crop. Achnanthes minutissima was the primary replacement species. Other taxa more abundant at 5 mu g l-1 CuT than in the control were Ceratoneis arcus, Cocconeis placentula, Navicula spp. and Synedra rumpens. Only A. minutissima and Calothrix spp. were more abundant at 10 mu g l-1 than in the control. Three resemblance measures (Canberra metric, Bray-Curtis and Dice) and diversity (Brillouin's) were evaluated for detecting differences in species composition among stream sections. The Canberra metric, an index sensitive to proportional rather than absolute differences, was the most informative. -from Authors

Compost Addition Enhanced Hyphal Growth and Sporulation of Arbuscular Mycorrhizal Fungi without Affecting Their Community Composition in the Soil

PubMed Central

Yang, Wei; Gu, Siyu; Xin, Ying; Bello, Ayodeji; Sun, Wenpeng; Xu, Xiuhong

2018-01-01

Arbuscular mycorrhizal (AM) fungi form symbiotic associations with most crop plant species in agricultural ecosystems, and are conspicuously influenced by various agricultural practices. To understand the impact of compost addition on AM fungi, we examined effect of four compost rates (0, 11.25, 22.5, and 45 Mg/ha) on the abundance and community composition of AM fungi in seedling, flowering, and mature stage of soybean in a 1-year compost addition experiment system in Northeast China. Soybean [Glycine max (L.) Merrill] was used as test plant. Moderate (22.5 Mg/ha) and high (45 Mg/ha) levels of compost addition significantly increased AM root colonization and extraradical hyphal (ERH) density compared with control, whereas low (11.5 Mg/ha) level of compost addition did not cause significant increase in AM root colonization and ERH density. AM fungal spore density was significantly enhanced by all the compost rates compared with control. The temporal variations analysis revealed that, AM root colonization in seedling stage was significantly lower than in flowering and mature stage. Although AM fungal operational taxonomic unit richness and community composition was unaffected by compost addition, some abundant AM fungal species showed significantly different response to compost addition. In mature stage, Rhizophagus fasciculatum showed increasing trend along with compost addition gradient, whereas the opposite was observed with Paraglomus sp. In addition, AM fungal community composition exhibited significant temporal variation during growing season. Further analysis indicated that the temporal variation in AM fungal community only occurred in control treatment, but not in low, moderate, and high level of compost addition treatments. Our findings highlighted the significant effects of compost addition on AM growth and sporulation, and emphasized that growth stage is a stronger determinant than 1-year compost addition in shaping AM fungal community in black soil of Northeast China. PMID:29467752

Compost Addition Enhanced Hyphal Growth and Sporulation of Arbuscular Mycorrhizal Fungi without Affecting Their Community Composition in the Soil.

PubMed

Yang, Wei; Gu, Siyu; Xin, Ying; Bello, Ayodeji; Sun, Wenpeng; Xu, Xiuhong

2018-01-01

Arbuscular mycorrhizal (AM) fungi form symbiotic associations with most crop plant species in agricultural ecosystems, and are conspicuously influenced by various agricultural practices. To understand the impact of compost addition on AM fungi, we examined effect of four compost rates (0, 11.25, 22.5, and 45 Mg/ha) on the abundance and community composition of AM fungi in seedling, flowering, and mature stage of soybean in a 1-year compost addition experiment system in Northeast China. Soybean [ Glycine max (L.) Merrill] was used as test plant. Moderate (22.5 Mg/ha) and high (45 Mg/ha) levels of compost addition significantly increased AM root colonization and extraradical hyphal (ERH) density compared with control, whereas low (11.5 Mg/ha) level of compost addition did not cause significant increase in AM root colonization and ERH density. AM fungal spore density was significantly enhanced by all the compost rates compared with control. The temporal variations analysis revealed that, AM root colonization in seedling stage was significantly lower than in flowering and mature stage. Although AM fungal operational taxonomic unit richness and community composition was unaffected by compost addition, some abundant AM fungal species showed significantly different response to compost addition. In mature stage, Rhizophagus fasciculatum showed increasing trend along with compost addition gradient, whereas the opposite was observed with Paraglomus sp. In addition, AM fungal community composition exhibited significant temporal variation during growing season. Further analysis indicated that the temporal variation in AM fungal community only occurred in control treatment, but not in low, moderate, and high level of compost addition treatments. Our findings highlighted the significant effects of compost addition on AM growth and sporulation, and emphasized that growth stage is a stronger determinant than 1-year compost addition in shaping AM fungal community in black soil of Northeast China.

Adult trees cause density-dependent mortality in conspecific seedlings by regulating the frequency of pathogenic soil fungi.

PubMed

Liang, Minxia; Liu, Xubing; Gilbert, Gregory S; Zheng, Yi; Luo, Shan; Huang, Fengmin; Yu, Shixiao

2016-12-01

Negative density-dependent seedling mortality has been widely detected in tropical, subtropical and temperate forests, with soil pathogens as a major driver. Here we investigated how host density affects the composition of soil pathogen communities and consequently influences the strength of plant-soil feedbacks. In field censuses of six 1-ha permanent plots, we found that survival was much lower for newly germinated seedlings that were surrounded by more conspecific adults. The relative abundance of pathogenic fungi in soil increased with increasing conspecific tree density for five of nine tree species; more soil pathogens accumulated around roots where adult tree density was higher, and this greater pathogen frequency was associated with lower seedling survival. Our findings show how tree density influences populations of soil pathogens, which creates plant-soil feedbacks that contribute to community-level and population-level compensatory trends in seedling survival. © 2016 John Wiley & Sons Ltd/CNRS.

Experimentally investigate ionospheric depletion chemicals in artificially created ionosphere

DOE Office of Scientific and Technical Information (OSTI.GOV)

Liu Yu; Cao Jinxiang; Wang Jian

2012-09-15

A new approach for investigating ionosphere chemical depletion in the laboratory is introduced. Air glow discharge plasma closely resembling the ionosphere in both composition and chemical reactions is used as the artificially created ionosphere. The ionospheric depletion experiment is accomplished by releasing chemicals such as SF{sub 6}, CCl{sub 2}F{sub 2}, and CO{sub 2} into the model discharge. The evolution of the electron density is investigated by varying the plasma pressure and input power. It is found that the negative ion (SF{sub 6}{sup -}, CCl{sub 2}F{sub 2}{sup -}) intermediary species provide larger reduction of the electron density than the positive ionmore » (CO{sub 2}{sup +}) intermediary species. The negative ion intermediary species are also more efficient in producing ionospheric holes because of their fast reaction rates. Airglow enhancement attributed to SF{sub 6} and CO{sub 2} releases agrees well with the published data. Compared to the traditional methods, the new scheme is simpler to use, both in the release of chemicals and in the electron density measurements. It is therefore more efficient for investigating the release of chemicals in the ionosphere.« less

Characteristics of the ichthyofauna of a temperate microtidal estuary with a reverse salinity gradient, including inter-decadal comparisons.

PubMed

Veale, L; Tweedley, J R; Clarke, K R; Hallett, C S; Potter, I C

2014-11-01

Data on the fish fauna of the Leschenault Estuary on the lower west coast of Australia were collected and used as a model to elucidate the characteristics of permanently open estuaries with a reverse salinity gradient, which undergo seasonal changes similar to many other estuaries with Mediterranean climate. Focus was placed on determining (1) the relationships of the number of species, density, life cycle category and species composition of fishes with region (within estuary), season and year and salinity, (2) whether species are partitioned along the lengths of such systems and (3) the extent and significance of any inter-decadal changes in species composition. The analyses and interpretation involved using multi-factorial permutational multivariate analysis of variance (PERMANOVA) and analysis of similarity (ANOSIM) designs, and three new or recently published visualization tools, i.e. modified non-metric multidimensional scaling (nMDS) plots, coherent species curves and segmented bubble plots. The base, lower, upper and apex regions of the Leschenault Estuary, along which the salinity increased in each season except in winter when most rainfall occurs, were sampled seasonally for the 2 years between winter 2008 and autumn 2010. Estuarine residents contributed twice as many individuals, but less than half the number of species as marine taxa. While the numbers of marine species and estuarine residents declined between the base or lower and apex regions, the individuals of marine species dominated the catches in the base region and estuarine residents in the other three regions. Ichthyofaunal composition in each region underwent conspicuous annual cyclical changes, due to time-staggered differences in recruitment among species, and changed sequentially along the estuary, both paralleling salinity trends. Different groups of species characterized the fauna in the different regions and seasons, thereby partitioning resources among species. The ichthyofauna of the apex region, in which salinities reached 54 and temperatures 36° C, recorded the highest maximum density and, in terms of abundance, was dominated (90%) by three atherinid species, emphasizing the ability of this family to tolerate extreme conditions. Comparisons between the data for 2008-2010 and 1994 demonstrate that the spotted hardyhead Craterocephalus mugiloides and the common hardyhead Atherinomorus vaigiensis had colonized and become abundant in the Leschenault Estuary in the intervening period. This represents a southwards extension of the distribution of these essentially tropical species during a period of increasing coastal water temperatures as a result of climate change. The abundance of weed-associated species, e.g. the western gobbleguts Ostorhinchus rueppellii and the soldier Gymnapistes marmoratus, increased, whereas that of the longfinned goby Favonigobius lateralis decreased, probably reflecting increases in eutrophication and siltation, respectively. © 2014 The Fisheries Society of the British Isles.

Effects of combined dimension reduction and tabulation on the simulations of a turbulent premixed flame using a large-eddy simulation/probability density function method

NASA Astrophysics Data System (ADS)

Kim, Jeonglae; Pope, Stephen B.

2014-05-01

A turbulent lean-premixed propane-air flame stabilised by a triangular cylinder as a flame-holder is simulated to assess the accuracy and computational efficiency of combined dimension reduction and tabulation of chemistry. The computational condition matches the Volvo rig experiments. For the reactive simulation, the Lagrangian Large-Eddy Simulation/Probability Density Function (LES/PDF) formulation is used. A novel two-way coupling approach between LES and PDF is applied to obtain resolved density to reduce its statistical fluctuations. Composition mixing is evaluated by the modified Interaction-by-Exchange with the Mean (IEM) model. A baseline case uses In Situ Adaptive Tabulation (ISAT) to calculate chemical reactions efficiently. Its results demonstrate good agreement with the experimental measurements in turbulence statistics, temperature, and minor species mass fractions. For dimension reduction, 11 and 16 represented species are chosen and a variant of Rate Controlled Constrained Equilibrium (RCCE) is applied in conjunction with ISAT to each case. All the quantities in the comparison are indistinguishable from the baseline results using ISAT only. The combined use of RCCE/ISAT reduces the computational time for chemical reaction by more than 50%. However, for the current turbulent premixed flame, chemical reaction takes only a minor portion of the overall computational cost, in contrast to non-premixed flame simulations using LES/PDF, presumably due to the restricted manifold of purely premixed flame in the composition space. Instead, composition mixing is the major contributor to cost reduction since the mean-drift term, which is computationally expensive, is computed for the reduced representation. Overall, a reduction of more than 15% in the computational cost is obtained.

Distribution and density of marine birds and mammals along the Kenai Fjords National Park coastline - March 2010

USGS Publications Warehouse

Coletti, Heather A.; Bodkin, James L.; Esslinger, George G.

2011-01-01

From March 21, 2010 to March 24, 2010, a winter marine bird and mammal skiff-based survey along the coast of Kenai Fjords National Park (KEFJ) was completed. This was the second winter survey completed for KEFJ since 2008. The primary objectives of the SWAN winter surveys are to characterize the species composition, density and distribution of the overwintering marine ducks prior to their migration to breeding grounds. Seasonal differences in species composition, distribution and density of other marine birds and mammals are also documented. The overall design calls for the sampling of the same transects during both the winter and summer surveys if safe and appropriate conditions allow. The 2010 survey took approximately four days to complete with a crew of six. The most common birds observed on the nearshore transects were the Barrow’s goldeneye (29.35/km2 , SE=9.24) and harlequin duck (29.30/km2 , SE=4.72). Harlequin ducks tended to be more evenly distributed along the coastline while Barrow’s goldeneye tended to be observed in less exposed areas along the coast and in larger groups. In contrast, the most abundant marine bird in KEFJ summer surveys is the Glaucous-winged gull, while Barrow’s goldeneye are nearly absent along the KEFJ coast. The most common marine mammal was the harbor seal (6.75/km2 , se=2.93) followed by the sea otter (3.59/km2 , se=0.90, adults and pups). Densities of harbor seals and sea otters in the summer were similar to the winter estimates.

Permanent colonization of creek sediments, creek water and limnic water plants by four Listeria species in low population densities.

PubMed

Lang-Halter, Evi; Schober, Steffen; Scherer, Siegfried

2016-09-01

During a 1-year longitudinal study, water, sediment and water plants from two creeks and one pond were sampled monthly and analyzed for the presence of Listeria species. A total of 90 % of 30 sediment samples, 84 % of 31 water plant samples and 67 % of 36 water samples were tested positive. Generally, most probable number counts ranged between 1 and 40 g-1, only occasionally >110 cfu g-1 were detected. Species differentiation based on FT-IR spectroscopy and multiplex PCR of a total of 1220 isolates revealed L. innocua (46 %), L. seeligeri (27 %), L. monocytogenes (25 %) and L. ivanovii (2 %). Titers and species compositions were similar during all seasons. While the species distributions in sediments and associated Ranunculus fluitans plants appeared to be similar in both creeks, RAPD typing did not provide conclusive evidence that the populations of these environments were connected. It is concluded that (i) the fresh-water sediments and water plants are year-round populated by Listeria, (ii) no clear preference for growth in habitats as different as sediments and water plants was found and (iii) the RAPD-based intraspecific biodiversity is high compared to the low population density.

Tree spatial structure, host composition and resource availability influence mirid density or black pod prevalence in cacao agroforests in Cameroon.

PubMed

Gidoin, Cynthia; Babin, Régis; Bagny Beilhe, Leïla; Cilas, Christian; ten Hoopen, Gerben Martijn; Bieng, Marie Ange Ngo

2014-01-01

Combining crop plants with other plant species in agro-ecosystems is one way to enhance ecological pest and disease regulation mechanisms. Resource availability and microclimatic variation mechanisms affect processes related to pest and pathogen life cycles. These mechanisms are supported both by empirical research and by epidemiological models, yet their relative importance in a real complex agro-ecosystem is still not known. Our aim was thus to assess the independent effects and the relative importance of different variables related to resource availability and microclimatic variation that explain pest and disease occurrence at the plot scale in real complex agro-ecosystems. The study was conducted in cacao (Theobroma cacao) agroforests in Cameroon, where cocoa production is mainly impacted by the mirid bug, Sahlbergella singularis, and black pod disease, caused by Phytophthora megakarya. Vegetation composition and spatial structure, resource availability and pest and disease occurrence were characterized in 20 real agroforest plots. Hierarchical partitioning was used to identify the causal variables that explain mirid density and black pod prevalence. The results of this study show that cacao agroforests can be differentiated on the basis of vegetation composition and spatial structure. This original approach revealed that mirid density decreased when a minimum number of randomly distributed forest trees were present compared with the aggregated distribution of forest trees, or when forest tree density was low. Moreover, a decrease in mirid density was also related to decreased availability of sensitive tissue, independently of the effect of forest tree structure. Contrary to expectations, black pod prevalence decreased with increasing cacao tree abundance. By revealing the effects of vegetation composition and spatial structure on mirids and black pod, this study opens new perspectives for the joint agro-ecological management of cacao pests and diseases at the plot scale, through the optimization of the spatial structure and composition of the vegetation.

Tree Spatial Structure, Host Composition and Resource Availability Influence Mirid Density or Black Pod Prevalence in Cacao Agroforests in Cameroon

PubMed Central

Gidoin, Cynthia; Babin, Régis; Bagny Beilhe, Leïla; Cilas, Christian; ten Hoopen, Gerben Martijn; Bieng, Marie Ange Ngo

2014-01-01

Combining crop plants with other plant species in agro-ecosystems is one way to enhance ecological pest and disease regulation mechanisms. Resource availability and microclimatic variation mechanisms affect processes related to pest and pathogen life cycles. These mechanisms are supported both by empirical research and by epidemiological models, yet their relative importance in a real complex agro-ecosystem is still not known. Our aim was thus to assess the independent effects and the relative importance of different variables related to resource availability and microclimatic variation that explain pest and disease occurrence at the plot scale in real complex agro-ecosystems. The study was conducted in cacao (Theobroma cacao) agroforests in Cameroon, where cocoa production is mainly impacted by the mirid bug, Sahlbergella singularis, and black pod disease, caused by Phytophthora megakarya. Vegetation composition and spatial structure, resource availability and pest and disease occurrence were characterized in 20 real agroforest plots. Hierarchical partitioning was used to identify the causal variables that explain mirid density and black pod prevalence. The results of this study show that cacao agroforests can be differentiated on the basis of vegetation composition and spatial structure. This original approach revealed that mirid density decreased when a minimum number of randomly distributed forest trees were present compared with the aggregated distribution of forest trees, or when forest tree density was low. Moreover, a decrease in mirid density was also related to decreased availability of sensitive tissue, independently of the effect of forest tree structure. Contrary to expectations, black pod prevalence decreased with increasing cacao tree abundance. By revealing the effects of vegetation composition and spatial structure on mirids and black pod, this study opens new perspectives for the joint agro-ecological management of cacao pests and diseases at the plot scale, through the optimization of the spatial structure and composition of the vegetation. PMID:25313514

The Importance of the Regional Species Pool, Ecological Species Traits and Local Habitat Conditions for the Colonization of Restored River Reaches by Fish

PubMed Central

Stoll, Stefan; Kail, Jochem; Lorenz, Armin W.; Sundermann, Andrea; Haase, Peter

2014-01-01

It is commonly assumed that the colonization of restored river reaches by fish depends on the regional species pools; however, quantifications of the relationship between the composition of the regional species pool and restoration outcome are lacking. We analyzed data from 18 German river restoration projects and adjacent river reaches constituting the regional species pools of the restored reaches. We found that the ability of statistical models to describe the fish assemblages established in the restored reaches was greater when these models were based on ‘biotic’ variables relating to the regional species pool and the ecological traits of species rather than on ‘abiotic’ variables relating to the hydromorphological habitat structure of the restored habitats and descriptors of the restoration projects. For species presence in restored reaches, ‘biotic’ variables explained 34% of variability, with the occurrence rate of a species in the regional species pool being the most important variable, while ’abiotic’ variables explained only the negligible amount of 2% of variability. For fish density in restored reaches, about twice the amount of variability was explained by ‘biotic’ (38%) compared to ‘abiotic’ (21%) variables, with species density in the regional species pool being most important. These results indicate that the colonization of restored river reaches by fish is largely determined by the assemblages in the surrounding species pool. Knowledge of species presence and abundance in the regional species pool can be used to estimate the likelihood of fish species becoming established in restored reaches. PMID:24404187

Endangered New Caledonian endemic mushroom coral Cantharellus noumeae in turbid, metal-rich, natural and artificial environments.

PubMed

Gilbert, Antoine; Heintz, Tom; Hoeksema, Bert W; Benzoni, Francesca; Fernandez, Jean Michel; Fauvelot, Cécile; Andréfouët, Serge

2015-11-15

Since its description in 1984, little attention has been paid to the New Caledonian endemic mushroom coral Cantharellus noumeae (Fungiidae), an IUCN Red-listed, endangered coral species. Our study presents the first ever quantitative assessment conducted on C. noumeae populations for two contrasting sites in the same turbid bay. Sites differed by their substrates of artificial or natural origins. Metal concentrations of superficial sediment were measured. C. noumeae was found in high densities in metal-rich and turbid environments at both locations, reaching up to 288 individuals per 50m(2). It was 3.5 times more abundant on natural rock than on artificial substrates. Recruitment was also higher proportionally on rock (47% vs 7-14%). The composition of the associated coral communities included 30-37 species occurring in low densities. Our findings clarify the environmental niche of this species and its colonization potential, in order to eventually better characterize its conservation status. Copyright © 2015 Elsevier Ltd. All rights reserved.

Large-Scale Spatial Distribution Patterns of Gastropod Assemblages in Rocky Shores

PubMed Central

Miloslavich, Patricia; Cruz-Motta, Juan José; Klein, Eduardo; Iken, Katrin; Weinberger, Vanessa; Konar, Brenda; Trott, Tom; Pohle, Gerhard; Bigatti, Gregorio; Benedetti-Cecchi, Lisandro; Shirayama, Yoshihisa; Mead, Angela; Palomo, Gabriela; Ortiz, Manuel; Gobin, Judith; Sardi, Adriana; Díaz, Juan Manuel; Knowlton, Ann; Wong, Melisa; Peralta, Ana C.

2013-01-01

Gastropod assemblages from nearshore rocky habitats were studied over large spatial scales to (1) describe broad-scale patterns in assemblage composition, including patterns by feeding modes, (2) identify latitudinal pattern of biodiversity, i.e., richness and abundance of gastropods and/or regional hotspots, and (3) identify potential environmental and anthropogenic drivers of these assemblages. Gastropods were sampled from 45 sites distributed within 12 Large Marine Ecosystem regions (LME) following the NaGISA (Natural Geography in Shore Areas) standard protocol (www.nagisa.coml.org). A total of 393 gastropod taxa from 87 families were collected. Eight of these families (9.2%) appeared in four or more different LMEs. Among these, the Littorinidae was the most widely distributed (8 LMEs) followed by the Trochidae and the Columbellidae (6 LMEs). In all regions, assemblages were dominated by few species, the most diverse and abundant of which were herbivores. No latitudinal gradients were evident in relation to species richness or densities among sampling sites. Highest diversity was found in the Mediterranean and in the Gulf of Alaska, while highest densities were found at different latitudes and represented by few species within one genus (e.g. Afrolittorina in the Agulhas Current, Littorina in the Scotian Shelf, and Lacuna in the Gulf of Alaska). No significant correlation was found between species composition and environmental variables (r≤0.355, p>0.05). Contributing variables to this low correlation included invasive species, inorganic pollution, SST anomalies, and chlorophyll-a anomalies. Despite data limitations in this study which restrict conclusions in a global context, this work represents the first effort to sample gastropod biodiversity on rocky shores using a standardized protocol across a wide scale. Our results will generate more work to build global databases allowing for large-scale diversity comparisons of rocky intertidal assemblages. PMID:23967204

Regional- and local-scale variations in benthic megafaunal composition at the Arctic deep-sea observatory HAUSGARTEN

NASA Astrophysics Data System (ADS)

Taylor, J.; Krumpen, T.; Soltwedel, T.; Gutt, J.; Bergmann, M.

2016-02-01

The Long-Term Ecological Research (LTER) observatory HAUSGARTEN, in the eastern Fram Strait, provides us the valuable ability to study the composition of benthic megafaunal communities through the analysis of seafloor photographs. This, in combination with extensive sampling campaigns, which have yielded a unique data set on faunal, bacterial, biogeochemical and geological properties, as well as on hydrography and sedimentation patterns, allows us to address the question of why variations in megafaunal community structure and species distribution exist within regional (60-110 km) and local (<4 km) scales. Here, we present first results from the latitudinal HAUSGARTEN gradient, consisting of three different stations (N3, HG-IV, S3) between 78°30‧N and 79°45‧N (2351-2788 m depth), obtained via the analysis of images acquired by a towed camera (OFOS-Ocean Floor Observation System) in 2011. We assess variability in megafaunal densities, species composition and diversity as well as biotic and biogenic habitat features, which may cause the patterns observed. While there were significant regional-scale differences in megafaunal composition and densities between the stations (N3=26.74±0.63; HG-IV=11.21±0.25; S3=18.34±0.39 individuals m-2), significant local differences were only found at HG-IV. Regional-scale variations may be due to the significant differences in ice coverage at each station as well as the different quantities of protein available, whereas local-scale differences at HG-IV may be a result of variation in bottom topography or factors not yet identified.

Temperate forest fragments maintain aboveground carbon stocks out to the forest edge despite changes in community composition.

PubMed

Ziter, Carly; Bennett, Elena M; Gonzalez, Andrew

2014-11-01

Edge effects are among the primary mechanisms by which forest fragmentation can influence the link between biodiversity and ecosystem processes, but relatively few studies have quantified these mechanisms in temperate regions. Carbon storage is an important ecosystem function altered by edge effects, with implications for climate change mitigation. Two opposing hypotheses suggest that aboveground carbon (AGC) stocks at the forest edge will (a) decrease due to increased tree mortality and compositional shifts towards smaller, lower wood density species (e.g., as seen in tropical systems) or, less often, (b) increase due to light/temperature-induced increases in diversity and productivity. We used field-based measurements, allometry, and mixed models to investigate the effects of proximity to the forest edge on AGC stocks, species richness, and community composition in 24 forest fragments in southern Quebec. We also asked whether fragment size or connectivity with surrounding forests altered these edge effects. AGC stocks remained constant across a 100 m edge-to-interior gradient in all fragment types, despite changes in tree community composition and stem density consistent with expectations of forest edge effects. We attribute this constancy primarily to compensatory effects of small trees at the forest edge; however, it is due in some cases to the retention of large trees at forest edges, likely a result of forest management. Our results suggest important differences between temperate and tropical fragments with respect to mechanisms linking biodiversity and AGC dynamics. Small temperate forest fragments may be valuable in conservation efforts based on maintaining biodiversity and multiple ecosystem services.

White-tailed deer impact on the vegetation dynamics of a northern hardwood forest

Treesearch

Stephen B. Horsley; Susan L. Stout; David S. deCalesta; David S. deCalesta

2003-01-01

Considerable controversy has arisen over the management of white-tailed deer in eastern landscapes where there is evidence of damage to forest vegetation, crops, and wildlife habitat attributable to deer. We examined the impact of 4, 8, 15, and 25 deer/km2 on herbaceous layer abundance and tree seedling density, height development, species composition, and diversity...

Forest descriptions and photographs of forested areas along the breaks of the Missouri River in eastern Montana, USA

Treesearch

Theresa B. Jain; Molly Juillerat; Jonathan Sandquist; Brad Sauer; Robert Mitchell; Scott McAvoy; Justin Hanley; John David

2007-01-01

This handbook presents information and photographs obtained from forest lands along the breaks of the Missouri River in eastern Montana. Forest characteristics summarized in tables with accompanying photographs can be used to provide quick estimates of species composition and densities within similar landscape features. These estimates may be useful to foresters,...

Recovery of a bearclover (Chamaebatia foliolosa) plant community after site preparation and planting of ponderosa pine seedlings

Treesearch

Philip M. McDonald; Gary O. Fiddler

1999-01-01

Bearclover inhabits thousands of acres of forest land in northern and central California, but little quantification of its recovery after timber harvest, site preparation, and planting is available. And the species composition and development of the ensuing plant community is largely unknown. Density, foliar cover, and height of planted ponderosa pine seedlings,...

Stand density index as a tool to assess the maximization of forest carbon and biomass

Treesearch

Christopher W. Woodall; Anthony W. D’Amato; John B. Bradford; Andrew O. Finley

2012-01-01

Given the ability of forests to mitigate greenhouse gas emissions and provide feedstocks to energy utilities, there is an emerging need to assess forest biomass/carbon accretion opportunities over large areas. Techniques for objectively quantifying stand stocking of biomass/carbon are lacking for large areas given the complexity of tree species composition in the U.S....

Acceleration of vegetation turnover and element cycling by mammalian herbivory in riparian ecosystems

Treesearch

Lem G. Butler; Knut Kielland

2008-01-01

1. We examined the effects of browsing by moose and snowshoe hares on vegetation structure, species composition, plant demography and element cycling in 25 riparian (willow) vegetation stands along the Tanana River, interior Alaska, across a 250-km gradient that represented a fivefold range in moose densities (0.2 to 1.0 km-2). 2. Browsing...

Characteristics of Five Climax Stands in New Hampshire

Treesearch

W.B. Leak; W.B. Leak

1987-01-01

Analysis of species composition, stand density, and diameter distribution in five climax or old-growth stands in New Hampshire indicates that the northern hardwood climax is characterized by at least 65 to 70 percent tolerant hardwoods, 130 square feet basal area per acre, and "q" ratios (2-inch diameter classes) of 1.3 to 1.4. Climax sprucehemlock have at...

Fire effects on tree overstories in the oak savannas of the Southwestern Borderlands Region

Treesearch

Peter F. Ffolliott; Gerald J. Gottfried; Cody L. Stropki; Hui Chen; Daniel G. Neary

2011-01-01

Effects of cool-season and warm-season prescribed burning treatments and a wildfire on tree overstories in oak savannas on the Cascabel Watersheds of the Southwestern Borderlands Region are reported in this paper. Information on the initial survival, levels of crown damage, species compositions and densities, annual growth rates, and basal sprouting following these...

A multiscale assessment of tree avoidance by prairie birds

USGS Publications Warehouse

Thompson, Sarah J.; Arnold, Todd W.; Amundson, Courtney L.

2014-01-01

In North America, grassland bird abundances have declined, likely as a result of loss and degradation of prairie habitat. Given the expense and limited opportunity to procure new grasslands, managers are increasingly focusing on ways to improve existing habitat for grassland birds, using techniques such as tree removal. To examine the potential for tree removal to benefit grassland birds, we conducted 446 point counts on 35 grassland habitat patches in the highly fragmented landscape of west-central Minnesota during 2009–2011. We modeled density of four grassland bird species in relation to habitat composition at multiple scales, focusing on covariates that described grass, woody vegetation (trees and large shrubs), or combinations of grass and woody vegetation. The best-supported models for all four grassland bird species incorporated variables measured at multiple scales, including local features such as grass height, litter depth, and local tree abundance, as well as landscape-level measures of grass and tree cover. Savannah Sparrows (Passerculus sandwichensis), Sedge Wrens (Cistothorus platensis), and Bobolinks (Dolichonyx oryzivorus) responded consistently and negatively to woody vegetation, but response to litter depth, grass height, and grassland extent were mixed among species. Our results suggest that reducing shrub and tree cover is more likely to increase the density of grassland birds than are attempts to improve grass quality or quantity. In particular, tree removal is more likely to increase density of Savannah Sparrows and Sedge Wrens than any reasonable changes in grass quality or quantity. Yet tree removal may not result in increased abundance of grassland birds if habitat composition is not considered at multiple scales. Managers will need to either manage at large scales (80–300 ha) or focus their efforts on removing trees in landscapes that contain some grasslands but few nearby wooded areas.

Ecological structure and function differs between habitats dominated by seagrasses and green seaweeds.

PubMed

Tuya, Fernando; Png-Gonzalez, Lydia; Riera, Rodrigo; Haroun, Ricardo; Espino, Fernando

2014-07-01

Marine vegetated habitats, e.g. seagrass meadows, deliver essential functions and services to coastal ecosystems and human welfare. Impacts induced by humans, however, have facilitated the replacement of seagrasses by alternative vegetation, e.g. green rhizophytic seaweeds. The implications of habitat shifts for ecosystem attributes and processes and the services they deliver remain poorly known. In this study, we compared ecosystem structure and function between Cymodocea nodosa seagrass meadows and bottoms dominated by Caulerpa prolifera, a green, native, rhizophytic seaweed, through 5 ecological proxies: (i) primary production (via community metabolism), (ii) composition and abundance of epifauna (a proxy for provision of habitat for epifauna), composition and abundance of (iii) small-sized (juvenile) and (iv) large-sized (adult) fishes (proxies for provision of habitat for fishes), and (v) sediment retention (a proxy for sediment stabilization). Four of these proxies were greater in C. nodosa seagrass meadows than in C. prolifera beds: gross primary productivity (∼1.4 times), the total abundance, species density and biomass of small-sized fishes (∼2.1, 1.3 and 1.3 times, respectively), the total abundance and species density of large-sized fishes (∼3.6 and 1.5 times, respectively), and sediment stabilization (∼1.4 times). In contrast, the total abundance and species density of epifauna was larger (∼3.1 and 1.7 times, respectively) in C. prolifera than in C. nodosa seagrass beds. These results suggest that ecosystem structure and function may differ if seagrasses are replaced by green rhizophytic seaweeds. Importantly, ecosystem functions may not be appropriate surrogates for one another. As a result, assessments of ecosystem services associated with ecosystem functions cannot be based on exclusively one service that is expected to benefit other services. Copyright © 2014 Elsevier Ltd. All rights reserved.

Ab initio study of the structural properties of acetonitrile-water mixtures

NASA Astrophysics Data System (ADS)

Chen, Jinfan; Sit, Patrick H.-L.

2015-08-01

Structural properties of acetonitrile and acetonitrile-water mixtures are studied using Density Functional Theory (DFT) and ab initio molecular dynamics simulations. Stable molecular clusters consisted of several water and acetonitrile molecules are identified to provide microscopic understanding of the interaction among water and acetonitrile molecules. Ab initio molecular dynamics simulations are performed to study the liquid structure at the finite temperature. Three mixing compositions in which the mole fraction of acetonitrile equals 0.109, 0.5 and 0.891 are studied. These compositions correspond to three distinct structural regimes. At the 0.109 and 0.891 mole fraction of acetonitrile, the majority species are mostly connected among themselves and the minority species are either isolated or forming small clusters without disrupting the network of the majority species. At the 0.5 mole fraction of acetonitrile, large water and acetonitrile clusters persist throughout the simulation, exhibiting the microheterogeneous behavior in acetonitrile-water mixtures in the mid-range mixing ratio.

Scaling Relations for Viscous and Gravitational Flow Instabilities in Multiphase Multicomponent Compressible Flow

NASA Astrophysics Data System (ADS)

Moortgat, J.; Amooie, M. A.; Soltanian, M. R.

2016-12-01

Problems in hydrogeology and hydrocarbon reservoirs generally involve the transport of solutes in a single solvent phase (e.g., contaminants or dissolved injection gas), or the flow of multiple phases that may or may not exchange mass (e.g., brine, NAPL, oil, gas). Often, flow is viscously and gravitationally unstable due to mobility and density contrasts within a phase or between phases. Such instabilities have been studied in detail for single-phase incompressible fluids and for two-phase immiscible flow, but to a lesser extent for multiphase multicomponent compressible flow. The latter is the subject of this presentation. Robust phase stability analyses and phase split calculations, based on equations of state, determine the mass exchange between phases and the resulting phase behavior, i.e., phase densities, viscosities, and volumes. Higher-order finite element methods and fine grids are used to capture the small-scale onset of flow instabilities. A full matrix of composition dependent coefficients is considered for each Fickian diffusive phase flux. Formation heterogeneity can have a profound impact and is represented by realistic geostatistical models. Qualitatively, fingering in multiphase compositional flow is different from single-phase problems because 1) phase mobilities depend on rock wettability through relative permeabilities, and 2) the initial density and viscosity ratios between phases may change due to species transfer. To quantify mixing rates in different flow regimes and for varying degrees of miscibility and medium heterogeneities, we define the spatial variance, scalar dissipation rate, dilution index, skewness, and kurtosis of the molar density of introduced species. Molar densities, unlike compositions, include compressibility effects. The temporal evolution of these measures shows that, while transport at the small-scale (cm) is described by the classical advection-diffusion-dispersion relations, scaling at the macro-scale (> 10 m) shows transitions between advective, diffusive, ballistic, sub-diffusive, and non-Fickian diffusive behavior. These scaling relations can be used to improve the predictive powers of field-scale reservoir simulations that cannot resolve the complexities of unstable flow and transport at cm-m scales.

Fish community responses to green tides in shallow estuarine and coastal areas

NASA Astrophysics Data System (ADS)

Le Luherne, E.; Réveillac, E.; Ponsero, A.; Sturbois, A.; Ballu, S.; Perdriau, M.; Le Pape, O.

2016-06-01

All over the world, numerous bays and estuarine systems that are known to shelter essential fish habitats are experiencing proliferations of green macroalgae known as green tides. Although the processes that enhance green tides in response to nutrient enrichment are well known, their consequences for ecological communities -especially for ichthyofauna- remain poorly studied. To estimate these consequences, this analysis focused on the two types of shallow systems that are experiencing green tides: sandy beaches and estuarine mudflats. In these two systems, macroalgae proliferation and fish community were surveyed along seasonal cycles at control and impacted sites that shared similar physico-chemical parameters and sediment structure. To analyse the consequences of green tides on the fish community, a Before-After Control-Impact approach was used. This approach reveals no difference between fish communities at the control and impacted sites before the macroalgal bloom. Then, it underlines an influence of green tides on the fish community, and this influence varies according to the composition, density and duration of the macroalgal bloom. Indeed, when intertidal systems experienced short proliferation and/or weak density, green tides did not seem to impact the fish community. However, when green macroalgae proliferated in large quantities and/or when the proliferation lasted for long periods, the fish community was significantly affected. These modifications in the fish community led to a significant decrease in fish species diversity and density until fish disappeared from impacted sites at high proliferations. Furthermore, the response of fish species to green tides differed according to their functional guilds. Negative consequences for benthic and marine juvenile fish species were beginning at low proliferations, whereas for pelagic fish species they occurred only at high proliferations. Thus, green tides significantly affect fish habitat suitability because they lead to changes in the composition of the fish community and eventually to the local disappearance of fish at high proliferations.

Chimpanzees in an anthropogenic landscape: Examining food resources across habitat types at Bossou, Guinea, West Africa.

PubMed

Bryson-Morrison, Nicola; Matsuzawa, Tetsuro; Humle, Tatyana

2016-12-01

Many primate populations occur outside protected areas in fragmented anthropogenic landscapes. Empirical data on the ecological characteristics that define an anthropogenic landscape are urgently required if conservation initiatives in such environments are to succeed. The main objective of our study was to determine the composition and availability of chimpanzee (Pan troglodytes verus) food resources across fine spatial scales in the anthropogenic landscape of Bossou, Guinea, West Africa. We examined food resources in all habitat types available in the chimpanzees' core area. We surveyed resource composition, structure and heterogeneity (20 m × 20 m quadrats, N = 54) and assessed temporal availability of food from phenology trails (total distance 5951 m; 1073 individual trees) over 1 year (2012-2013). Over half of Bossou consists of regenerating forest and is highly diverse in terms of chimpanzee food species; large fruit bearing trees are rare and confined to primary and riverine forest. Moraceae (mulberries and figs) was the dominant family, trees of which produce drupaceous fruits favored by chimpanzees. The oil palm occurs at high densities throughout and is the only species found in all habitat types except primary forest. Our data suggest that the high densities of oil palm and fig trees, along with abundant terrestrial herbaceous vegetation and cultivars, are able to provide the chimpanzees with widely available resources, compensating for the scarcity of large fruit trees. A significant difference was found between habitat types in stem density/ha and basal area m 2 /ha of chimpanzee food species. Secondary, young secondary, and primary forest emerged as the most important habitat types for availability of food tree species. Our study emphasizes the importance of examining ecological characteristics of an anthropogenic landscape as each available habitat type is unlikely to be equally important in terms of spatial and temporal availability of resources. Am. J. Primatol. 78:1237-1249, 2016. © 2016 Wiley Periodicals, Inc. © 2016 Wiley Periodicals, Inc.

Of Mice, Men and Elephants: The Relation between Articular Cartilage Thickness and Body Mass

PubMed Central

Malda, Jos; de Grauw, Janny C.; Benders, Kim E. M.; Kik, Marja J. L.; van de Lest, Chris H. A.; Creemers, Laura B.; Dhert, Wouter J. A.; van Weeren, P. René

2013-01-01

Mammalian articular cartilage serves diverse functions, including shock absorption, force transmission and enabling low-friction joint motion. These challenging requirements are met by the tissue’s thickness combined with its highly specific extracellular matrix, consisting of a glycosaminoglycan-interspersed collagen fiber network that provides a unique combination of resilience and high compressive and shear resistance. It is unknown how this critical tissue deals with the challenges posed by increases in body mass. For this study, osteochondral cores were harvested post-mortem from the central sites of both medial and lateral femoral condyles of 58 different mammalian species ranging from 25 g (mouse) to 4000 kg (African elephant). Joint size and cartilage thickness were measured and biochemical composition (glycosaminoclycan, collagen and DNA content) and collagen cross-links densities were analyzed. Here, we show that cartilage thickness at the femoral condyle in the mammalian species investigated varies between 90 µm and 3000 µm and bears a negative allometric relationship to body mass, unlike the isometric scaling of the skeleton. Cellular density (as determined by DNA content) decreases with increasing body mass, but gross biochemical composition is remarkably constant. This however need not affect life-long performance of the tissue in heavier mammals, due to relatively constant static compressive stresses, the zonal organization of the tissue and additional compensation by joint congruence, posture and activity pattern of larger mammals. These findings provide insight in the scaling of articular cartilage thickness with body weight, as well as in cartilage biochemical composition and cellularity across mammalian species. They underscore the need for the use of appropriate in vivo models in translational research aiming at human applications. PMID:23437402

Ant diversity in Brazilian tropical dry forests across multiple vegetation domains

NASA Astrophysics Data System (ADS)

Figueiredo Silva, Luciana; Mello Souza, Rayana; Solar, Ricardo R. C.; de Siqueira Neves, Frederico

2017-03-01

Understanding the environmental drivers of biodiversity persistence and community organization in natural ecosystems is of great importance for planning the conservation of those ecosystems. This comprehension is even more important in severely threatened ecosystems. In this context, we analyzed ant communities in tropical dry forests (TDFs) in Brazil. These forests are embedded within other biomes, such as Cerrado and Caatinga. In this study, we asked whether (i) ant species richness and composition changes between TDFs within different vegetation domains; (ii) whether ant species richness and β-diversity increase north-to-south, possibly related to changes in tree richness and tree density; and (iii) species replacement contributes relatively more to β-diversity than does nestedness. We found that species composition is unique to each TDF within different biomes, and that species richness and β-diversity differ among the vegetation domains, being smaller in the Caatinga. We also found that replacement contributes most to β-diversity, although this contribution is lower in Caatinga than in Cerrado. We show that regional context is the main driver of species diversity, which is likely to be driven by both historical and ecological mechanisms. By analyzing large spatial scale variation in TDF environmental characteristics, we were able to evaluate how ant diversity changes along an environmental gradient. The high levels of species replacement and unique species composition of each region indicates that, to fully conserve TDFs, we need to have various conservation areas distributed across the entire range of vegetation domains in which these forests can be found. Thus, we demonstrate that a landscape-wise planning is urgent and necessary in order to preserve tropical dry forests.

[Species composition and diversity of soil mesofauna in the 'Holy Hills' fragmentary tropical rain forest of Xishuangbanna, China].

PubMed

Yang, X; Sha, L

2001-04-01

The species composition and diversity of soil mesofauna were examined in fragmented dry tropical seasonal rainforest of tow 'Holy Hills' of Dai nationality, compared with the continuous moist tropical seasonal rain forest of Nature Reserve in Xishuangbanna area. 5 sample quadrats were selected along the diagonal of 20 m x 20 m sampling plot, and the samples of litterfall and 0-3 cm soil were collected from each 50 cm x 10 cm sample quadrat. Animals in soil sample were collected by using dry-funnel(Tullgren's), were identified to their groups according to the order. The H' index, D.G index and the pattern of relative abundance of species were used to compare the diversity of soil mesofauna. The results showed that the disturbance of vegetation and soil resulted by tropical rainforest fragmentation was the major factor affecting the diversity of soil mesofauna. Because the fragmented forest was intruded by some pioneer tree species and the "dry and warm" effect operated, this forest had more litterfall on the floor and more humus in the soil than the continuous moist rain forest. The soil condition with more soil organic matter, total N and P, higher pH value and lower soil bulk density became more favorable to the soil mesofauna. Therefore, the species richness, abundance and diversity of soil mesofauna in fragmented forests were higher than those in continuous forest, but the similarity of species composition in fragmented forest to the continuous forest was minimal. Soil mesofauna diversity in fragmented forests did not change with decreasing fragmented area, indicating that there was no species-area effect operation in this forest. The pattern of relative abundance of species in these forest soils was logarithmic series distribution.

Chemistry of sprite discharges through ion-neutral reactions

NASA Astrophysics Data System (ADS)

Hiraki, Y.; Kasai, Y.; Fukunishi, H.

2008-02-01

We estimate the concentration changes, caused by a single streamer in sprites, of ozone and related minor species as odd nitrogen (NOx) and hydrogen (HOx) families in the upper stratosphere and mesosphere. The streamer has an intense electric field and high electron density at its head where a large number of chemically-radical ions and atoms are produced through electron impact on neutral molecules. After propagation of the streamer, the densities of minor species can be perturbed through ion-neutral chemical reactions initiated by the relaxation of these radical products. We evaluate the production rates of ions and atoms using electron kinetics model and assuming the electric field and electron density in the streamer head. We calculate the density variations mainly for NOx, Ox, and HOx species using a one-dimensional model of the neutral and ion composition of the middle atmosphere, including the effect of the sprite streamer. Results at the nighttime condition show that the densities of NO, O3, H, and OH increase suddenly through reactions triggered by firstly produced atomic nitrogen and oxygen, and electrons just after streamer initiation. It is shown that NO and NO2 still remain for 1 h by a certain order of increase with their source-sink balance predominantly around 60 km; for other species, increases in O3, OH, HO2, and H2O2 still remain in the range of 40-70 km. From this affirmative result of long time behavior previously not presented, we emphasize that sprites would have a power to impact on local chemistry at night. We also discuss comparison with previous studies and suggestion for satellite observations.

Chemistry of sprite discharges through ion-neutral reactions

NASA Astrophysics Data System (ADS)

Hiraki, Y.; Kasai, Y.; Fukunishi, H.

2008-07-01

We estimate the concentration changes, caused by streamer discharge in sprites, of ozone and related minor species as odd nitrogen (NOx) and hydrogen (HOx) families in the upper stratosphere and mesosphere. The streamer has an intense electric field and high electron density at its head, where a large number of chemically-radical ions and atoms are produced through electron impact on neutral molecules. After its propagation, densities of minor species can be perturbed through ion-neutral chemical reactions initiated by the relaxation of these radical products. We evaluate the production rates of ions and atoms using an electron kinetics model and by assuming that the electric field and electron density are in the head region. We calculate the density variations mainly for NOx, Ox, and HOx species using a one-dimensional model of the neutral and ion composition of the middle atmosphere, including the effect of the sprite streamer. Results at the nighttime condition show that the densities of NO, O3, H, and OH increase suddenly through reactions triggered by the first atomic nitrogen and oxygen product, and electrons just after streamer initiation. It is shown that NO and NO2 still remain for 1 h by a certain order of increase with their source-sink balance, predominantly around 60 km; for other species, increases in O3, OH, HO2, and H2O2 still remain in the range of 40 70 km. From this affirmative result of long-time behavior previously not presented, we emphasize that sprites would have the power to impact local chemistry at night. We also discuss the consistency with previous theoretical and observational studies, along with future suggestions.

Pacific island landbird monitoring annual report, National Park of American Samoa, Ta‘u and Tutuila units, 2011

USGS Publications Warehouse

Judge, Seth W.; Camp, Richard J.; Vaivai, Visa; Hart, Patrick J.

2013-01-01

NPSA canopy and understory composition was predominantly native, and trees formed a dense closed canopy at nearly 90% of the stations sampled. More than half of the tree heights in both units were taller than 5 m and the majority of slopes were steeper than 20 degrees. There were no clear dominant tree species in the mixed native forests. The most common tree species documented included Syzygium spp., Dysoxylum spp., Ficus spp., Hibiscus tiliaceus and Rhus taitensis (among others). There were significant differences in the distribution of bird densities between legacy and random transects. Determining differences in detection probabilities cannot be definitively assessed from a single survey. We recommend both panels be sampled in the future until bias in density and abundance can be evaluated, or if sampling may be reduced.

A Multispecies Framework for Landscape Conservation Planning

USGS Publications Warehouse

Schwenk, W.S.; Donovan, T.M.

2011-01-01

Rapidly changing landscapes have spurred the need for quantitative methods for conservation assessment and planning that encompass large spatial extents. We devised and tested a multispecies framework for conservation planning to complement single-species assessments and ecosystem-level approaches. Our framework consisted of 4 elements: sampling to effectively estimate population parameters, measuring how human activity affects landscapes at multiple scales, analyzing the relation between landscape characteristics and individual species occurrences, and evaluating and comparing the responses of multiple species to landscape modification. We applied the approach to a community of terrestrial birds across 25,000 km2 with a range of intensities of human development. Human modification of land cover, road density, and other elements of the landscape, measured at multiple spatial extents, had large effects on occupancy of the 67 species studied. Forest composition within 1 km of points had a strong effect on occupancy of many species and a range of negative, intermediate, and positive associations. Road density within 1 km of points, percent evergreen forest within 300 m, and distance from patch edge were also strongly associated with occupancy for many species. We used the occupancy results to group species into 11 guilds that shared patterns of association with landscape characteristics. Our multispecies approach to conservation planning allowed us to quantify the trade-offs of different scenarios of land-cover change in terms of species occupancy. ?? 2011 Society for Conservation Biology.

[Monthly changes in the benthic macro-invertebrate community structure in the habitats of Phragmites australis marsh in the Dongtan wetland of the Yangtze River estuary, China].

PubMed

Zhang, Heng; Ye, Jin Yu; Liang, Xiao Li; Zhu, Xiao Jing; Jin, Shao Fei; Chen, Yuan Ge; Zhang, Jia Rui; Dai, Yang

2017-04-18

Based on the data of the benthic macro-invertebrates community in the Phragmites australis marsh in the Dongtan Wetland of the Yangtze River estuary collected from May 2015 to April 2016, we evaluated the monthly variations in the species composition, biodiversity and community structure of the benthic macro-invertebrates. The results showed that the average height and degree of coverage for P. australis increased monthly from March to August, and then deceased from September. The density and aboveground biomass (dry mass, g) of P. australis peaked in July. A total of twenty species (including 2 species only identified to genus level and 2 species identified to family level) were found in the survey periods, including 11 Gastropoda, 5 Malacostraca, 2 Insecta and 2 Polychaeta. Three snail species (Assiminea latericea, Assiminea violacea and Cerithideopsis largillierti) dominated the benthic communities in terms of numerical abundance. The number of epifauna species was the most (11 species), followed by 5 burrowing species and 4 infauna species. There were significant monthly variations in the density and biomass of the macro-invertebrates. The density and biomass of benthic community reached the maximum in August. The Margalef's species richness index (D) and Shannon index (H) showed significant differences monthly, but Pielou's index (J) except in November. Three macro-zoobenthic assemblages were identified with the 42% similarity level. The non-Metric Multidimensional scaling plot indicates that the benthic community in May, October and November was distinct compared to that in the other months. The present study suggested the density of the benthic macro-invertebrates community in the P. australis marshes was somewhat correlated with water temperature, underground biomass and salinity. But those correlation were not significant (P>0.05). Because of the continuous impact of anthropogenic activities, the biodiversity of the benthic macro-invertebrate community has been decreasing for several years. More attention should be paid to the habitat value of the P. australis marshes in the future.

Hierarchical spatial segregation of two Mediterranean vole species: the role of patch-network structure and matrix composition.

PubMed

Pita, Ricardo; Lambin, Xavier; Mira, António; Beja, Pedro

2016-09-01

According to ecological theory, the coexistence of competitors in patchy environments may be facilitated by hierarchical spatial segregation along axes of environmental variation, but empirical evidence is limited. Cabrera and water voles show a metapopulation-like structure in Mediterranean farmland, where they are known to segregate along space, habitat, and time axes within habitat patches. Here, we assess whether segregation also occurs among and within landscapes, and how this is influenced by patch-network and matrix composition. We surveyed 75 landscapes, each covering 78 ha, where we mapped all habitat patches potentially suitable for Cabrera and water voles, and the area effectively occupied by each species (extent of occupancy). The relatively large water vole tended to be the sole occupant of landscapes with high habitat amount but relatively low patch density (i.e., with a few large patches), and with a predominantly agricultural matrix, whereas landscapes with high patch density (i.e., many small patches) and low agricultural cover, tended to be occupied exclusively by the small Cabrera vole. The two species tended to co-occur in landscapes with intermediate patch-network and matrix characteristics, though their extents of occurrence were negatively correlated after controlling for environmental effects. In combination with our previous studies on the Cabrera-water vole system, these findings illustrated empirically the occurrence of hierarchical spatial segregation, ranging from within-patches to among-landscapes. Overall, our study suggests that recognizing the hierarchical nature of spatial segregation patterns and their major environmental drivers should enhance our understanding of species coexistence in patchy environments.

Structure and composition of the neutral upper atmosphere of Mars from the MAVEN NGIMS investigation

PubMed Central

Benna, M.; Elrod, M.; Yelle, R. V.; Bougher, S. W.; Stone, S. W.; Jakosky, B. M.

2015-01-01

Abstract The Mars Atmosphere and Volatile EvolutioN (MAVEN) Neutral Gas and Ion Mass Spectrometer (NGIMS) provides sensitive detections of neutral gas and ambient ion composition. NGIMS measurements of nine atomic and molecular neutral species, and their variation with altitude, latitude, and solar zenith angle are reported over several months of operation of the MAVEN mission. Sampling NGIMS signals from multiple neutral species every several seconds reveals persistent and unexpectedly large amplitude density structures. The scale height temperatures are mapped over the course of the first few months of the mission from high down to midlatitudes. NGIMS measurements near the homopause of 40Ar/N2 ratios agree with those reported by the Sample Analysis at Mars investigation and allow the altitude of the homopause for the most abundant gases to be established. PMID:27667873

Development and infectious disease in hosts with complex life cycles.

PubMed

Searle, Catherine L; Xie, Gisselle Yang; Blaustein, Andrew R

2013-01-01

Metamorphosis is often characterized by profound changes in morphology and physiology that can affect the dynamics of species interactions. For example, the interaction between a pathogen and its host may differ depending on the life stage of the host or pathogen. One pathogen that infects hosts with complex life cycles is the emerging fungal pathogen of amphibians, Batrachochytrium dendrobatidis (Bd). We sought to determine how conditions at the larval stage can affect variation in development and patterns of Bd infection across amphibian life stages. We used outdoor experimental mesocosms to simulate natural pond habitats and manipulated the presence of Bd, the larval density, and the number of host species in larvae of two co-occurring amphibian species (Rana cascadae and Pseudacris regilla). We found that infection differed between species throughout development; P. regilla consistently had higher infection severity compared to R. cascadae. Additionally, while up to 100% of larvae were infected, only 18.2% of R. cascadae and 81.5% of P. regilla were infected after metamorphosis. This indicates that amphibians have the ability to recover from Bd infection as they undergo metamorphosis. Higher larval densities in P. regilla led to a shorter larval period, and individuals with a shorter larval period had lower infection severity. This led to a trend where P. regilla larvae reared at high densities tended to have lower infection prevalence after metamorphosis. We also found that exposure to Bd increased larval mortality and prolonged the larval period in P. regilla, indicating that P. regilla are susceptible to the negative effects of Bd as larvae. This study demonstrates that host density, species composition, and pathogen exposure may all interact to influence development and infection in hosts with complex life cycles.

Linking Foraging Decisions to Residential Yard Bird Composition

PubMed Central

Lerman, Susannah B.; Warren, Paige S.; Gan, Hilary; Shochat, Eyal

2012-01-01

Urban bird communities have higher densities but lower diversity compared with wildlands. However, recent studies show that residential urban yards with native plantings have higher native bird diversity compared with yards with exotic vegetation. Here we tested whether landscape designs also affect bird foraging behavior. We estimated foraging decisions by measuring the giving-up densities (GUD; amount of food resources remaining when the final forager quits foraging on an artificial food patch, i.e seed trays) in residential yards in Phoenix, AZ, USA. We assessed how two yard designs (mesic: lush, exotic vegetation; xeric: drought-tolerant and native vegetation) differed in foraging costs. Further, we developed a statistical model to calculate GUDs for every species visiting the seed tray. Birds foraging in mesic yards depleted seed trays to a lower level (i.e. had lower GUDs) compared to birds foraging in xeric yards. After accounting for bird densities, the lower GUDs in mesic yards appeared largely driven by invasive and synanthropic species. Furthermore, behavioral responses of individual species were affected by yard design. Species visiting trays in both yard designs had lower GUDs in mesic yards. Differences in resource abundance (i.e., alternative resources more abundant and of higher quality in xeric yards) contributed to our results, while predation costs associated with foraging did not. By enhancing the GUD, a common method for assessing the costs associated with foraging, our statistical model provided insights into how individual species and bird densities influenced the GUD. These differences we found in foraging behavior were indicative of differences in habitat quality, and thus our study lends additional support for native landscapes to help reverse the loss of urban bird diversity. PMID:22927974

Understory dominance and the new climax: Impacts of Japanese knotweed (Fallopia japonica) invasion on native plant diversity and recruitment in a riparian woodland

PubMed Central

Wilson, Matthew J.; Freundlich, Anna E.

2017-01-01

Abstract Riparian forests exhibit levels of ecological disturbance that leave them especially prone to biological invasions. Japanese knotweed (Fallopia japonica) is particularly suited to these habitats and is an aggressive invader along watercourses throughout its now-global range as an exotic invader. Using one of the few Silver Maple Floodplain Forest communities that has not been invaded by F. japonica in the West Branch Susquehanna River valley (Pennsylvania, USA) as a baseline, this study examines whether and how this primarily intact riparian forest community differs from nearby invaded communities in terms of 1) native species richness, 2) native species density, and 3) riparian forest tree recruitment. Defining a baseline (intact) community composition will inform restoration plans for local riparian forests where knotweed might be eradicated or reduced. Invaded and non-invaded sites differed statistically across species richness, species density, and tree recruitment. Our results suggest that F. japonica has reduced the diversity and abundance of native understory riparian plant species. The species also appears to have suppressed long-term tree recruitment, setting up a trajectory whereby the eventual decline of trees currently in the canopy could shift this community from a tree-dominated riparian forest to a knotweed-dominated herbaceous shrubland. PMID:29308042

Lost in diversity: the interactions between soil-borne fungi, biodiversity and plant productivity.

PubMed

Mommer, Liesje; Cotton, T E Anne; Raaijmakers, Jos M; Termorshuizen, Aad J; van Ruijven, Jasper; Hendriks, Marloes; van Rijssel, Sophia Q; van de Mortel, Judith E; van der Paauw, Jan Willem; Schijlen, Elio G W M; Smit-Tiekstra, Annemiek E; Berendse, Frank; de Kroon, Hans; Dumbrell, Alex J

2018-04-01

There is consensus that plant species richness enhances plant productivity within natural grasslands, but the underlying drivers remain debated. Recently, differential accumulation of soil-borne fungal pathogens across the plant diversity gradient has been proposed as a cause of this pattern. However, the below-ground environment has generally been treated as a 'black box' in biodiversity experiments, leaving these fungi unidentified. Using next generation sequencing and pathogenicity assays, we analysed the community composition of root-associated fungi from a biodiversity experiment to examine if evidence exists for host specificity and negative density dependence in the interplay between soil-borne fungi, plant diversity and productivity. Plant species were colonised by distinct (pathogenic) fungal communities and isolated fungal species showed negative, species-specific effects on plant growth. Moreover, 57% of the pathogenic fungal operational taxonomic units (OTUs) recorded in plant monocultures were not detected in eight plant species plots, suggesting a loss of pathogenic OTUs with plant diversity. Our work provides strong evidence for host specificity and negative density-dependent effects of root-associated fungi on plant species in grasslands. Our work substantiates the hypothesis that fungal root pathogens are an important driver of biodiversity-ecosystem functioning relationships. © 2018 The Authors. New Phytologist © 2018 New Phytologist Trust.

Phylogenetic ecology of leaf surface traits in the milkweeds (Asclepias spp.): chemistry, ecophysiology, and insect behavior.

PubMed

Agrawal, Anurag A; Fishbein, Mark; Jetter, Reinhard; Salminen, Juha-Pekka; Goldstein, Jessica B; Freitag, Amy E; Sparks, Jed P

2009-08-01

The leaf surface is the contact point between plants and the environment and plays a crucial role in mediating biotic and abiotic interactions. Here, we took a phylogenetic approach to investigate the function, trade-offs, and evolution of leaf surface traits in the milkweeds (Asclepias). Across 47 species, we found trichome densities of up to 3000 trichomes cm(-2) and epicuticular wax crystals (glaucousness) on 10 species. Glaucous species had a characteristic wax composition dominated by very-long-chain aldehydes. The ancestor of the milkweeds was probably a glaucous species, from which there have been several independent origins of glabrous and pubescent types. Trichomes and wax crystals showed negatively correlated evolution, with both surface types showing an affinity for arid habitats. Pubescent and glaucous milkweeds had a higher maximum photosynthetic rate and lower stomatal density than glabrous species. Pubescent and glaucous leaf surfaces impeded settling behavior of monarch caterpillars and aphids compared with glabrous species, although surface types did not show consistent differentiation in secondary chemistry. We hypothesize that pubescence and glaucousness have evolved as alternative mechanisms with similar functions. The glaucous type, however, appears to be ancestral, lost repeatedly, and never regained; we propose that trichomes are a more evolutionarily titratable strategy.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Düchs, Dominik; Delaney, Kris T., E-mail: kdelaney@mrl.ucsb.edu; Fredrickson, Glenn H., E-mail: ghf@mrl.ucsb.edu

Field-theoretic models have been used extensively to study the phase behavior of inhomogeneous polymer melts and solutions, both in self-consistent mean-field calculations and in numerical simulations of the full theory capturing composition fluctuations. The models commonly used can be grouped into two categories, namely, species models and exchange models. Species models involve integrations of functionals that explicitly depend on fields originating both from species density operators and their conjugate chemical potential fields. In contrast, exchange models retain only linear combinations of the chemical potential fields. In the two-component case, development of exchange models has been instrumental in enabling stable complexmore » Langevin (CL) simulations of the full complex-valued theory. No comparable stable CL approach has yet been established for field theories of the species type. Here, we introduce an extension of the exchange model to an arbitrary number of components, namely, the multi-species exchange (MSE) model, which greatly expands the classes of soft material systems that can be accessed by the complex Langevin simulation technique. We demonstrate the stability and accuracy of the MSE-CL sampling approach using numerical simulations of triblock and tetrablock terpolymer melts, and tetrablock quaterpolymer melts. This method should enable studies of a wide range of fluctuation phenomena in multiblock/multi-species polymer blends and composites.« less

Minimal Effects of an Invasive Flowering Shrub on the Pollinator Community of Native Forbs

PubMed Central

Chung, Y. Anny; Burkle, Laura A.; Knight, Tiffany M.

2014-01-01

Biological invasions can strongly influence species interactions such as pollination. Most of the documented effects of exotic plant species on plant-pollinator interactions have been observational studies using single pairs of native and exotic plants, and have focused on dominant exotic plant species. We know little about how exotic plants alter interactions in entire communities of plants and pollinators, especially at low to medium invader densities. In this study, we began to address these gaps by experimentally removing the flowers of a showy invasive shrub, Rosa multiflora, and evaluating its effects on the frequency, richness, and composition of bee visitors to co-flowering native plants. We found that while R. multiflora increased plot-level richness of bee visitors to co-flowering native plant species at some sites, its presence had no significant effects on bee visitation rate, visitor richness, bee community composition, or abundance overall. In addition, we found that compared to co-flowering natives, R. multiflora was a generalist plant that primarily received visits from generalist bee species shared with native plant species. Our results suggest that exotic plants such as R. multiflora may facilitate native plant pollination in a community context by attracting a more diverse assemblage of pollinators, but have limited and idiosyncratic effects on the resident plant-pollinator network in general. PMID:25343718

Impact of an invasive weed, Parthenium hysterophorus, on a pasture community in south east Queensland, Australia.

PubMed

Nguyen, Thi; Bajwa, Ali Ahsan; Belgeri, Amalia; Navie, Sheldon; O'Donnell, Chris; Adkins, Steve

2017-12-01

Parthenium weed is a highly invasive alien species in more than 40 countries around the world. Along with severe negative effects on human and animal health and crop production, it also causes harm to ecosystem functioning by reducing the native plant species biodiversity. However, its impacts on native plant species, especially in pasture communities, are less known. Given parthenium weed causes substantial losses to Australian pastures' productivity, it is crucial to estimate its impact on pasture communities. This study evaluates the impact of parthenium weed upon species diversity in a pasture community at Kilcoy, south east Queensland, Australia. Sub-sites containing three levels of parthenium weed density (i.e. high, low and zero) were chosen to quantify the above- and below-ground plant community structure. Species richness, diversity and evenness were all found to be significantly reduced as the density of parthenium weed increased; an effect was evident even when parthenium weed was present at relatively low densities (i.e. two plants m -2 ). This trend was observed in the summer season as well as in winter season when this annual weed was absent from the above-ground plant community. This demonstrates the strong impact that parthenium weed has upon the community composition and functioning throughout the year. It also shows the long-term impact of parthenium weed on the soil seed bank where it had displaced several native species. So, management options used for parthenium weed should also consider the reduction of parthenium weed seed bank along with controlling its above-ground populations.

Effects of 10-Year Management Regimes on the Soil Seed Bank in Saline-Alkaline Grassland

PubMed Central

Ma, Hongyuan; Yang, Haoyu; Liang, Zhengwei; Ooi, Mark K. J.

2015-01-01

Background Management regimes for vegetation restoration of degraded grasslands can significantly affect the process of ecological succession. However, few studies have focused on variation in the soil seed bank during vegetation restoration under different management regimes, especially in saline-alkaline grassland habitats. Our aim was to provide insights into the ecological effects of grassland management regimes on soil seed bank composition and vegetation establishment in mown, fenced, transplanted and natural grassland sites, all dominated by the perennial rhizomatous grass Leymus chinensis. Methodology We studied species composition and diversity in both the soil seed bank and aboveground vegetation in differently managed grasslands in Northeast China. An NMDS (nonmetric multidimensional scaling) was used to evaluate the relationship between species composition, soil seed banks, aboveground vegetation and soil properties. Principal Findings Fenced and mown grassland sites had high density and species richness in both the soil seed bank and aboveground vegetation. The Transplanted treatment exhibited the highest vegetation growth and seed production of the target species L. chinensis. Seeds of L. chinensis in the soil occurred only in transplanted and natural grassland. Based on the NMDS analysis, the number of species in both the soil seed bank and aboveground vegetation were significantly related to soil Na+, Cl-, RSC (residual sodium carbonate), alkalinity, ESP (exchangeable sodium percentage) and AP (available phosphorus). Conclusions Soil seed bank composition and diversity in the saline-alkaline grassland were significantly affected by the management regimes implemented, and were also significantly related to the aboveground vegetation and several soil properties. Based on vegetative growth, reproductive output and maintenance of soil seed bank, the transplanting was identified as the most effective method for relatively rapid restoration of the target species L. chinensis. This approach could be beneficial for the restoration of dominant species in a wide range of degraded grassland ecosystems. PMID:25902145

Temporal Patterns in the Abundance and Species Composition of Spiders on Host Plants of the Invasive Moth Epiphyas postvittana (Lepidoptera: Tortricidae).

PubMed

Hogg, Brian N; Mills, Nicholas J; Daane, Kent M

2017-06-01

Generalist predators such as spiders may help mitigate the spread and impact of exotic herbivores. The lack of prey specificity and long generation times of spiders may allow them to persist when pests are scarce, and to limit the growth of pest populations before they reach damaging levels. We examined whether resident spiders are likely to play a role in maintaining populations of the invasive light brown apple moth, Epiphyas postvittana (Walker) (Lepidoptera: Tortricidae), below outbreak levels in California. We surveyed the spider community on two E. postvittana host plants, the ornamental Australian tea tree, Leptospermum laevigatum, and the weed French broom, Genista monspessulana, to characterize spider and larval E. postvittana abundance and spider species composition throughout the year. Spider densities and species composition showed slight seasonal changes. Spiders were present during periods of high and low E. postvittana abundance. Anyphaenid hunting spiders, Anyphaena aperta Banks in Australian tea tree and Anyphaena pacifica Banks in French broom, dominated spider species composition at four of five sampled sites, and underwent only slight seasonal variation in abundance. Adult A. aperta were rare at all times of the year, suggesting that high mortality among juvenile A. aperta limits the potential of this species as a predator of E. postvittana. Nevertheless, the continued presence of spiders throughout the year indicates that the resident spider community is likely to play a key role in reducing E. postvittana populations in California. Published by Oxford University Press on behalf of Entomological Society of America 2017. This work is written by US Government employees and is in the public domain in the US.

Plant hydraulic responses to long-term dry season nitrogen deposition alter drought tolerance in a Mediterranean-type ecosystem.

PubMed

Pivovaroff, Alexandria L; Santiago, Louis S; Vourlitis, George L; Grantz, David A; Allen, Michael F

2016-07-01

Anthropogenic nitrogen (N) deposition represents a significant N input for many terrestrial ecosystems. N deposition can affect plants on scales ranging from photosynthesis to community composition, yet few studies have investigated how changes in N availability affect plant water relations. We tested the effects of N addition on plant water relations, hydraulic traits, functional traits, gas exchange, and leaf chemistry in a semi-arid ecosystem in Southern California using long-term experimental plots fertilized with N for over a decade. The dominant species were Artemisia california and Salvia mellifera at Santa Margarita Ecological Reserve and Adenostoma fasciculatum and Ceanothus greggii at Sky Oaks Field Station. All species, except Ceanothus, showed increased leaf N concentration, decreased foliar carbon to N ratio, and increased foliar N isotopic composition with fertilization, indicating that added N was taken up by study species, yet each species had a differing physiological response to long-term N addition. Dry season predawn water potentials were less negative with N addition for all species except Adenostoma, but there were no differences in midday water potentials, or wet season water potentials. Artemisia was particularly responsive, as N addition increased stem hydraulic conductivity, stomatal conductance, and leaf carbon isotopic composition, and decreased wood density. The alteration of water relations and drought resistance parameters with N addition in Artemisia, as well as Adenostoma, Ceanothus, and Salvia, indicate that N deposition can affect the ability of native Southern California shrubs to respond to drought.

Soil seed bank in different habitats of the Eastern Desert of Egypt.

PubMed

Gomaa, Nasr H

2012-04-01

The floristic composition and species diversity of the germinable soil seed bank were studied in three different habitats (desert salinized land, desert wadi, and reclaimed land) in the Eastern Desert of Egypt. Moreover, the degree of similarity between the seed bank and the above-ground vegetation was determined. The seed bank was studied in 40 stands representing the three habitats. Ten soil samples (each 25 × 20 cm and 5 cm depth) were randomly taken per stand. The seed bank was investigated by the seedling emergence method. Some 61 species belonging to 21 families and 54 genera were identified in the germinable seed bank. The recorded species include 43 annuals and 18 perennials. Ordination of stands by Detrended Correspondence Analysis (DCA) indicates that the stands of the three habitats are markedly distinguishable and show a clear pattern of segregation on the ordination planes. This indicates variations in the species composition among habitats. The results also demonstrate significant associations between the floristic composition of the seed bank and edaphic factors such as CaCO3, electrical conductivity, organic carbon and soil texture. The reclaimed land has the highest values of species richness, Shannon-index of diversity and the density of the germinable seed bank followed by the habitats of desert wadi and desert salinized land. Motyka's similarity index between the seed bank and the above-ground vegetation is significantly higher in reclaimed land (75.1%) compared to desert wadi (38.4%) and desert salinized land (36.5%).

Ungulate browsers promote herbaceous layer diversity in logged temperate forests

USGS Publications Warehouse

Faison, Edward K.; DeStefano, Stephen; Foster, David R.; Motzkin, Glenn; Rapp, Josh

2016-01-01

Ungulates are leading drivers of plant communities worldwide, with impacts linked to animal density, disturbance and vegetation structure, and site productivity. Many ecosystems have more than one ungulate species; however, few studies have specifically examined the combined effects of two or more species on plant communities. We examined the extent to which two ungulate browsers (moose [Alces americanus]) and white-tailed deer [Odocoileus virginianus]) have additive (compounding) or compensatory (opposing) effects on herbaceous layer composition and diversity, 5–6 years after timber harvest in Massachusetts, USA. We established three combinations of ungulates using two types of fenced exclosures – none (full exclosure), deer (partial exclosure), and deer + moose (control) in six replicated blocks. Species composition diverged among browser treatments, and changes were generally additive. Plant assemblages characteristic of closed canopy forests were less abundant and assemblages characteristic of open/disturbed habitats were more abundant in deer + moose plots compared with ungulate excluded areas. Browsing by deer + moose resulted in greater herbaceous species richness at the plot scale (169 m2) and greater woody species richness at the subplot scale (1 m2) than ungulate exclusion and deer alone. Browsing by deer + moose resulted in strong changes to the composition, structure, and diversity of forest herbaceous layers, relative to areas free of ungulates and areas browed by white-tailed deer alone. Our results provide evidence that moderate browsing in forest openings can promote both herbaceous and woody plant diversity. These results are consistent with the classic grazing-species richness curve, but have rarely been documented in forests.

Composition and diversity of nifH genes of nitrogen-fixing cyanobacteria associated with boreal forest feather mosses.

PubMed

Ininbergs, Karolina; Bay, Guillaume; Rasmussen, Ulla; Wardle, David A; Nilsson, Marie-Charlotte

2011-10-01

Recent studies have revealed that nitrogen fixation by cyanobacteria living in association with feather mosses is a major input of nitrogen to boreal forests. We characterized the community composition and diversity of cyanobacterial nifH phylotypes associated with each of two feather moss species (Pleurozium schreberi and Hylocomium splendens) on each of 30 lake islands varying in ecosystem properties in northern Sweden. Nitrogen fixation was measured using acetylene reduction, and nifH sequences were amplified using general and cyanobacterial selective primers, separated and analyzed using density gradient gel electrophoresis (DGGE) or cloning, and further sequenced for phylogenetic analyses. Analyses of DGGE fingerprinting patterns revealed two host-specific clusters (one for each moss species), and sequence analysis showed five clusters of nifH phylotypes originating from heterocystous cyanobacteria. For H. splendens only, N(2) fixation was related to both nifH composition and diversity among islands. We demonstrated that the cyanobacterial communities associated with feather mosses show a high degree of host specificity. However, phylotype composition and diversity, and nitrogen fixation, did not differ among groups of islands that varied greatly in their availability of resources. These results suggest that moss species identity, but not extrinsic environmental conditions, serves as the primary determinant of nitrogen-fixing cyanobacterial communities that inhabit mosses. © 2011 The Authors. New Phytologist © 2011 New Phytologist Trust.

Assessing plant community composition fails to capture impacts of white-tailed deer on native and invasive plant species.

PubMed

Nuzzo, Victoria; Dávalos, Andrea; Blossey, Bernd

2017-07-01

Excessive herbivory can have transformative effects on forest understory vegetation, converting diverse communities into depauperate ones, often with increased abundance of non-native plants. White-tailed deer are a problematic herbivore throughout much of eastern North America and alter forest understory community structure. Reducing (by culling) or eliminating (by fencing) deer herbivory is expected to return understory vegetation to a previously diverse condition. We examined this assumption from 1992 to 2006 at Fermilab (Batavia, IL) where a cull reduced white-tailed deer ( Odocoileus virginianus ) abundance in 1998/1999 by 90 % from 24.6 to 2.5/km 2 , and at West Point, NY, where we assessed interactive effects of deer, earthworms, and invasive plants using 30 × 30 m paired fenced and open plots in 12 different forests from 2009 to 2012. We recorded not only plant community responses (species presence and cover) within 1 m 2 quadrats, but also responses of select individual species (growth, reproduction). At Fermilab, introduced Alliaria petiolata abundance initially increased as deer density increased, but then declined after deer reduction. The understory community responded to the deer cull by increased cover, species richness and height, and community composition changed but was dominated by early successional native forbs. At West Point plant community composition was affected by introduced earthworm density but not deer exclusion. Native plant cover increased and non-native plant cover decreased in fenced plots, thus keeping overall plant cover similar. At both sites native forb cover increased in response to deer reduction, but the anticipated response of understory vegetation failed to materialize at the community level. Deer-favoured forbs ( Eurybia divaricata , Maianthemum racemosum , Polygonatum pubescens and Trillium recurvatum ) grew taller and flowering probability increased in the absence of deer. Plant community monitoring fails to capture initial and subtle effects of reduced or even cessation of deer browse on browse sensitive species. Measuring responses of individual plants (growth, flowering and reproductive success) provides a more sensitive and powerful assessment of forest understory responses to deer management.

Assessing plant community composition fails to capture impacts of white-tailed deer on native and invasive plant species

DOE Office of Scientific and Technical Information (OSTI.GOV)

Nuzzo, Victoria; Davalos, Andrea; Blossey, Bernd

Excessive herbivory can have transformative effects on forest understory vegetation, converting diverse communities into depauperate ones, often with increased abundance of non-native plants. White-tailed deer are a problematic herbivore throughout much of eastern North America and alter forest understory community structure. Reducing (by culling) or eliminating (by fencing) deer herbivory is expected to return understory vegetation to a previously diverse condition. We examined this assumption from 1992 to 2006 at Fermilab (Batavia, IL) where a cull reduced white-tailed deer ( Odocoileus virginianus) abundance in 1998/1999 by 90 % from 24.6 to 2.5/km 2, and at West Point, NY, where wemore » assessed interactive effects of deer, earthworms, and invasive plants using 30 × 30 m paired fenced and open plots in 12 different forests from 2009 to 2012. We recorded not only plant community responses (species presence and cover) within 1 m 2 quadrats, but also responses of select individual species (growth, reproduction). At Fermilab, introduced Alliaria petiolata abundance initially increased as deer density increased, but then declined after deer reduction. The understory community responded to the deer cull by increased cover, species richness and height, and community composition changed but was dominated by early successional native forbs. At West Point plant community composition was affected by introduced earthworm density but not deer exclusion. Native plant cover increased and non-native plant cover decreased in fenced plots, thus keeping overall plant cover similar. At both sites native forb cover increased in response to deer reduction, but the anticipated response of understory vegetation failed to materialize at the community level. Deer-favoured forbs ( Eurybia divaricata, Maianthemum racemosum, Polygonatum pubescens and Trillium recurvatum) grew taller and flowering probability increased in the absence of deer. Plant community monitoring fails to capture initial and subtle effects of reduced or even cessation of deer browse on browse sensitive species. As a result, measuring responses of individual plants (growth, flowering and reproductive success) provides a more sensitive and powerful assessment of forest understory responses to deer management.« less

Assessing plant community composition fails to capture impacts of white-tailed deer on native and invasive plant species

DOE PAGES

Nuzzo, Victoria; Davalos, Andrea; Blossey, Bernd

2017-06-08

Excessive herbivory can have transformative effects on forest understory vegetation, converting diverse communities into depauperate ones, often with increased abundance of non-native plants. White-tailed deer are a problematic herbivore throughout much of eastern North America and alter forest understory community structure. Reducing (by culling) or eliminating (by fencing) deer herbivory is expected to return understory vegetation to a previously diverse condition. We examined this assumption from 1992 to 2006 at Fermilab (Batavia, IL) where a cull reduced white-tailed deer ( Odocoileus virginianus) abundance in 1998/1999 by 90 % from 24.6 to 2.5/km 2, and at West Point, NY, where wemore » assessed interactive effects of deer, earthworms, and invasive plants using 30 × 30 m paired fenced and open plots in 12 different forests from 2009 to 2012. We recorded not only plant community responses (species presence and cover) within 1 m 2 quadrats, but also responses of select individual species (growth, reproduction). At Fermilab, introduced Alliaria petiolata abundance initially increased as deer density increased, but then declined after deer reduction. The understory community responded to the deer cull by increased cover, species richness and height, and community composition changed but was dominated by early successional native forbs. At West Point plant community composition was affected by introduced earthworm density but not deer exclusion. Native plant cover increased and non-native plant cover decreased in fenced plots, thus keeping overall plant cover similar. At both sites native forb cover increased in response to deer reduction, but the anticipated response of understory vegetation failed to materialize at the community level. Deer-favoured forbs ( Eurybia divaricata, Maianthemum racemosum, Polygonatum pubescens and Trillium recurvatum) grew taller and flowering probability increased in the absence of deer. Plant community monitoring fails to capture initial and subtle effects of reduced or even cessation of deer browse on browse sensitive species. As a result, measuring responses of individual plants (growth, flowering and reproductive success) provides a more sensitive and powerful assessment of forest understory responses to deer management.« less

Multi-species occurrence models to evaluate the effects of conservation and management actions

USGS Publications Warehouse

Zipkin, E.F.; Andrew, Royle J.; Dawson, D.K.; Bates, S.

2010-01-01

Conservation and management actions often have direct and indirect effects on a wide range of species. As such, it is important to evaluate the impacts that such actions may have on both target and non-target species within a region. Understanding how species richness and composition differ as a result of management treatments can help determine potential ecological consequences. Yet it is difficult to estimate richness because traditional sampling approaches detect species at variable rates and some species are never observed. We present a framework for assessing management actions on biodiversity using a multi-species hierarchical model that estimates individual species occurrences, while accounting for imperfect detection of species. Our model incorporates species-specific responses to management treatments and local vegetation characteristics and a hierarchical component that links species at a community-level. This allows for comprehensive inferences on the whole community or on assemblages of interest. Compared to traditional species models, occurrence estimates are improved for all species, even for those that are rarely observed, resulting in more precise estimates of species richness (including species that were unobserved during sampling). We demonstrate the utility of this approach for conservation through an analysis comparing bird communities in two geographically similar study areas: one in which white-tailed deer (Odocoileus virginianus) densities have been regulated through hunting and one in which deer densities have gone unregulated. Although our results indicate that species and assemblage richness were similar in the two study areas, point-level richness was significantly influenced by local vegetation characteristics, a result that would have been underestimated had we not accounted for variability in species detection.

Twenty-two year changes in regeneration potential in an old-growth Quercus forest in the Mid-Cumberland plateau, Tennessee

Treesearch

Stacy L. Clark; Scott J. Torreano; David L. Loftis; Luben D. Dimov

2007-01-01

A study was initiated in 1983 and then reexamined in 2005 to determine regeneration potential and species composition changes in an old-growth forest on the mid-Cumberland Plateau. Response to a 1980s mortality event was evident in the increased density of the largest size class, with Acer saccharum (Marsh.) showing the greatest increase (>100...

Mapping forest characteristics at fine resolution across large landscapes of the southeastern United States using NAIP imagery and FIA field plot data

Treesearch

John Hogland; Nathaniel Anderson; Joseph St. Peter; Jason Drake; Paul Medley

2018-01-01

Accurate information is important for effective management of natural resources. In the field of forestry, field measurements of forest characteristics such as species composition, basal area, and stand density are used to inform and evaluate management activities. Quantifying these metrics accurately across large landscapes in a meaningful way is extremely important...

Effects of repeated precommercial thinnings in central hardwood sapling stands

Treesearch

Donald E. Hilt; Martin E. Dale

1982-01-01

Precommercial thinnings were repeated four times in a central hardwood sapling stand beginning at age 8 and ending at age 22. Treated plots were thinned on an area-wide basis to specified density levels of 30-, 50-, and 70-percent stocking. The species composition of all stems in the stand was altered somewhat by thinning, but similar trends occurred on control plots....

The selection system of silviculture in spruce-fir stands - procedures, early results, and comparisons with unmanaged stands

Treesearch

Robert M. Frank; Barton M. Blum

1978-01-01

Early results after 20 years of record keeping indicate that spruce-fir stands will respond to the selection system of silviculture. Stand quality is improved, species composition can be altered, diameter-class distribution approaches a stated goal, stand density is controlled, and yields are increased. Selection silviculture in spruce-fir can now be compared to early...

The contribution of red wood ants to soil C and N pools and CO2 emissions in subalpine forests

Treesearch

Anita C. Risch; Martin F. Jurgensen; Martin Schutz; Deborah S. Page-Dumroese

2005-01-01

Little information is available regarding red wood ant (RWA; Formica rufa group) impacts on soil carbon (C) and nitrogen (N) cycling in forest ecosystems. We found that RWA mound density (number per ha) was linked to forest tree species composition, slope aspect, and canopy closure. The size of RWA mounds was positively correlated with successional...

Estimation of avian population sizes and species richness across a boreal landscape in Alaska

USGS Publications Warehouse

Handel, Colleen M.; Swanson, S.A.; Nigro, Debora A.; Matsuoka, S.M.

2009-01-01

We studied the distribution of birds breeding within five ecological landforms in Yukon-Charley Rivers National Preserve, a 10,194-km2 roadless conservation unit on the Alaska-Canada border in the boreal forest zone. Passerines dominated the avifauna numerically, comprising 97% of individuals surveyed but less than half of the 115 species recorded in the Preserve. We used distance-sampling and discrete-removal models to estimate detection probabilities, densities, and population sizes across the Preserve for 23 species of migrant passerines and five species of resident passerines. Yellow-rumped Warblers (Dendroica coronata) and Dark-eyed Juncos (Junco hyemalis) were the most abundant species, together accounting for 41% of the migrant passerine populations estimated. White-winged Crossbills (Loxia leucoptera), Boreal Chickadees (Poecile hudsonica), and Gray Jays (Perisoreus canadensis) were the most abundant residents. Species richness was greatest in the Floodplain/Terrace landform flanking the Yukon River but densities were highest in the Subalpine landform. Species composition was related to past glacial history and current physiography of the region and differed notably from other areas of the northwestern boreal forest. Point-transect surveys, augmented with auxiliary observations, were well suited to sampling the largely passerine avifauna across this rugged landscape and could be used across the boreal forest region to monitor changes in northern bird distribution and abundance. ?? 2009 The Wilson Ornithological Society.

Posthodiplostomum cuticola (Digenea: Diplostomatidae) in intermediate fish hosts: factors contributing to the parasite infection and prey selection by the definitive bird host.

PubMed

Ondracková, M; Simková, A; Gelnar, M; Jurajda, P

2004-12-01

Infection parameters of Posthodiplostomum cuticola, a digenean parasite with a complex life-cycle, were investigated in fish (the second intermediate host) from 6 floodplain water bodies over 2 years. A broad range of factors related to abiotic characteristics of localities, density of the first intermediate (planorbid snails) and definitive (wading birds) hosts and fish community structure were tested for their effects on P. cuticola infection in juvenile and adult fish. Characters of the littoral zone and flood duration were found to be important factors for the presence of the first intermediate and definitive hosts. Visitation time of definitive bird hosts was also related to adult fish host density. Localities with P. cuticola infected fish were visited by a higher number of bird species. Infection of P. cuticola in fish and similarities in infection among fish host assemblages were correlated with fish host density and fish species composition. Parasite infection in both adult and juvenile fishes was associated with the slope of the bank and the bottom type, in particular in juvenile fish assemblages with snail host density. We conclude that habitat characteristics, snail host density and fish community structure contribute significantly to P. cuticola infection in fish hosts.

The distribution, abundance, and the effects of fire on mound building termites (Trinervitermes and Cubitermes spp., Isoptera: Termitidae) in northern guinea savanna West Africa.

PubMed

Benzie, John A H

1986-11-01

Termite mound densities in typical guinea savanna, Detarium, and grassland (boval) habitats in northern guinea savanna were determined by random quadratting of 2-3 sites in each habitat (100, 10x10 m quadrats per habitat). Dominant species in guinea savanna were T. geminatus (46 mounds ha -1 ) and T. oeconomus (21 mounds ha -1 ), in Detarium T. geminatus (59 mounds ha -1 ) and C. curtatus (45 mounds ha -1 ) and in boval C. curtatus (72 mounds ha -1 ) and T. geminatus (22 mounds ha -1 ). Only C. curtatus densities and total densities differed significantly between sites within habitats, but all species differed significantly in abundance between habitats. The composition of each community was related to general environment but no particular environmental variable was shown to be a major determinant of termite distribution. Evidence for the limitation of termite populations was obtained from indirect evidence of competition between colonies in Detarium, and by experimental manipulation of fire regimes in the typical guinea savanna habitat. Harvester termites increased four-five fold over two years in fire-protected plots as a result of increased food supplies. Total termite densities in the fire-protected community equilibrated to the new population density (100 mounds ha -1 ) after only two-three years.

Resilience of benthic deep-sea fauna to mining activities.

PubMed

Gollner, Sabine; Kaiser, Stefanie; Menzel, Lena; Jones, Daniel O B; Brown, Alastair; Mestre, Nelia C; van Oevelen, Dick; Menot, Lenaick; Colaço, Ana; Canals, Miquel; Cuvelier, Daphne; Durden, Jennifer M; Gebruk, Andrey; Egho, Great A; Haeckel, Matthias; Marcon, Yann; Mevenkamp, Lisa; Morato, Telmo; Pham, Christopher K; Purser, Autun; Sanchez-Vidal, Anna; Vanreusel, Ann; Vink, Annemiek; Martinez Arbizu, Pedro

2017-08-01

With increasing demand for mineral resources, extraction of polymetallic sulphides at hydrothermal vents, cobalt-rich ferromanganese crusts at seamounts, and polymetallic nodules on abyssal plains may be imminent. Here, we shortly introduce ecosystem characteristics of mining areas, report on recent mining developments, and identify potential stress and disturbances created by mining. We analyze species' potential resistance to future mining and perform meta-analyses on population density and diversity recovery after disturbances most similar to mining: volcanic eruptions at vents, fisheries on seamounts, and experiments that mimic nodule mining on abyssal plains. We report wide variation in recovery rates among taxa, size, and mobility of fauna. While densities and diversities of some taxa can recover to or even exceed pre-disturbance levels, community composition remains affected after decades. The loss of hard substrata or alteration of substrata composition may cause substantial community shifts that persist over geological timescales at mined sites. Copyright © 2017 Elsevier Ltd. All rights reserved.

Assessment of a model of forest dynamics under contrasting climate and disturbance regimes in the Pacific Northwest [FORCLIM

USGS Publications Warehouse

Busing, Richard T.; Solomon, Allen M.

2005-01-01

An individual-based model of forest dynamics (FORCLIM) was tested for its ability to simulate forest composition and structure in the Pacific Northwest region of North America. Simulation results across gradients of climate and disturbance were compared to forest survey data from several vegetation zones in western Oregon. Modelled patterns of tree species composition, total basal area and stand height across climate gradients matched those in the forest survey data. However, the density of small stems (<50 cm DBH) was underestimated by the model. Thus actual size-class structure and other density-based parameters of stand structure were not simulated with high accuracy. The addition of partial-stand disturbances at moderate frequencies (<0.01 yr-1) often improved agreement between simulated and actual results. Strengths and weaknesses of the FORCLIM model in simulating forest dynamics and structure in the Pacific Northwest are discussed.

How plant neighborhood composition influences herbivory: Testing four mechanisms of associational resistance and susceptibility

PubMed Central

2017-01-01

Neighboring plants can decrease or increase each other’s likelihood of damage from herbivores through associational resistance or susceptibility, respectively. Associational effects (AE) can transpire through changes in herbivore or plant traits that affect herbivore movement, densities, and feeding behaviors to ultimately affect plant damage. While much work has focused on understanding the mechanisms that underlie associational effects, we know little about how these mechanisms are influenced by neighborhood composition, i.e., plant density or relative frequency which is necessary to make predictions about when AE should occur in nature. Using a series of field and greenhouse experiments, I examined how plant density and relative frequency affected plant damage to Solanum carolinense and four mechanisms that underlie AE; (i) accumulation of insect herbivores and arthropod predators, (ii) microclimate conditions, (iii) plant resistance, and (iv) specialist herbivore preference. I found a positive relationship between S. carolinense damage and the relative frequency of a non-focal neighbor (Solidago altissima) and all four AE mechanisms were influenced by one or multiple neighborhood components. Frequency-dependence in S. carolinense damage is most likely due to greater generalist herbivore load on S. carolinense (through spillover from S. altissima) with microclimate variables, herbivore preference, predation pressures, and plant resistance having relatively weaker effects. Associational effects may have long-term consequences for these two plant species during plant succession and understanding context-dependent herbivory has insect pest management implication for other plant species in agriculture and forestry. PMID:28486538

Linking plant hydraulics and beta diversity in tropical forests

DOE Office of Scientific and Technical Information (OSTI.GOV)

Christoffersen, Bradley; Meir, Patrick; McDowell, Nate G.

In tropical forests, studies of xylem traits governing water transport through plants, or ‘hydraulic architecture’ (Tyree et al., 1991), and changes in species composition across environmental gradients, or ‘beta diversity’ (Gentry, 1988; Ackerly & Cornwell, 2007), have progressedmostly in parallel until recently (Hao et al., 2008; Bartlett et al., 2016). In this issue of New Phytologist, Cosme et al. (pp. 000–5 000) present a timely contribution to the intersection of plant hydraulic architecture (HA) with trait-based community ecology. Building on previous biogeographical work that demonstrated shifts in species composition (beta diversity) across a gradient from valleys to plateaus in centralmore » Amazonia (Schietti et al., 2014), Cosme et al. explore how variation in HA might underpin this sorting, sampling pairs of congeneric species restrictedmostly to either plateau or valley habitats. Valley species had significantly lower wood density and higher hydraulically-weighted vessel diameter and vessel area. By contrast, trees with some of the largest hydraulically-weighted vessel diameters existed in tall, deciduous plateau species, while the leaf: sapwood area ratio decreased with height in valley but not plateau species. These intriguing results suggest that species differentiation in water transport traits mediate edaphic filtering along the valley-toplateau gradient, in contrast to previous work where wood mechanical support mediated valley-to-plateau environmental filtering (Fortunel et al., 2014).« less

Local population density and group composition influence the signal-preference relationship in Enchenopa treehoppers (Hemiptera: Membracidae).

PubMed

Fowler-Finn, K D; Cruz, D C; Rodríguez, R L

2017-01-01

Many animals exhibit social plasticity - changes in phenotype or behaviour in response to experience with conspecifics that change how evolutionary processes like sexual selection play out. Here, we asked whether social plasticity arising from variation in local population density in male advertisement signals and female mate preferences influences the form of sexual selection. We manipulated local density and determined whether this changed how the distribution of male signals overlapped with female preferences - the signal preference relationship. We specifically look at the shape of female mate preference functions, which, when compared to signal distributions, provide hypotheses about the form of sexual selection. We used Enchenopa binotata treehoppers, a group of plant-feeding insects that exhibit natural variation in local densities across individual host plants, populations, species and years. We measured male signal frequency and female preference functions across the density treatments. We found that male signals varied across local social groups, but not according to local density. By contrast, female preferences varied with local density - favouring higher signal frequencies in denser environments. Thus, local density changes the signal-preference relationship and, consequently, the expected form of sexual selection. We found no influence of sex ratio on the signal-preference relationship. Our findings suggest that plasticity arising from variation in local group density and composition can alter the form of sexual selection with potentially important consequences both for the maintenance of variation and for speciation. © 2016 European Society For Evolutionary Biology. Journal of Evolutionary Biology © 2016 European Society For Evolutionary Biology.

Effect of short-term hypoxia on marine nematode community structure and vertical distribution pattern in three different sediment types of the North Sea.

PubMed

Taheri, Mehrshad; Braeckman, Ulrike; Vincx, Magda; Vanaverbeke, Jan

2014-08-01

The responses of nematode communities to short-term hypoxia (1 and 7 days) were investigated in three North Sea stations with different sediment types (coarse silt, fine sand and medium sand). In the field, nematode density, diversity, vertical distribution and community structure differ among the stations. In the laboratory, oxic and hypoxic treatments were established for 1 and 7 days for all sediment types. Comparison between field control and oxic day 1 treatments showed that experimental sediment handling did not affect nematode characteristics. Our results revealed that short-term hypoxia did not affect total density, diversity, community composition, vertical density profiles (except in the fine sand) and densities of five dominant species in all sediment types. Copyright © 2014 Elsevier Ltd. All rights reserved.

Management intensity at field and landscape levels affects the structure of generalist predator communities.

PubMed

Rusch, Adrien; Birkhofer, Klaus; Bommarco, Riccardo; Smith, Henrik G; Ekbom, Barbara

2014-07-01

Agricultural intensification is recognised as a major driver of biodiversity loss in human-modified landscapes. Several agro-environmental measures at different spatial scales have been suggested to mitigate the negative impact of intensification on biodiversity and ecosystem services. The effect of these measures on the functional structure of service-providing communities remains, however, largely unexplored. Using two distinct landscape designs, we examined how the management options of organic farming at the field scale and crop diversification at the landscape level affect the taxonomic and functional structure of generalist predator communities and how these effects vary along a landscape complexity gradient. Organic farming as well as landscapes with longer and more diversified crop rotations enhanced the activity-density of spiders and rove beetles, but not the species richness or evenness. Our results indicate that the two management options affected the functional composition of communities, as they primarily enhanced the activity-density of functionally similar species. The two management options increased the functional similarity between spider species in regards to hunting mode and habitat preference. Organic farming enhanced the functional similarity of rove beetles. Management options at field and landscape levels were generally more important predictors of community structure when compared to landscape complexity. Our study highlights the importance of considering the functional composition of generalist predators in order to understand how agro-environmental measures at various scales shape community assemblages and ecosystem functioning in agricultural landscapes.

Secondary foundation species as drivers of trophic and functional diversity: evidence from a tree-epiphyte system.

PubMed

Angelini, Christine; Silliman, Brian R

2014-01-01

Facilitation cascades arise where primary foundation species facilitate secondary (dependent) foundation species, and collectively, they increase habitat complexity and quality to enhance biodiversity. Whether such phenomena occur in nonmarine systems and if secondary foundation species enhance food web structure (e.g., support novel feeding guilds) and ecosystem function (e.g., provide nursery for juveniles) remain unclear. Here we report on field experiments designed to test whether trees improve epiphyte survival and epiphytes secondarily increase the number and diversity of adult and juvenile invertebrates in a potential live oak-Tillandsia usneoides (Spanish moss) facilitation cascade. Our results reveal that trees reduce physical stress to facilitate Tillandsia, which, in turn, reduces desiccation and predation stress to facilitate invertebrates. In experimental removals, invertebrate total density, juvenile density, species richness and H' diversity were 16, 60, 1.7, and 1.5 times higher, and feeding guild richness and H' were 5 and 11 times greater in Tillandsia-colonized relative to Tillandsia-removal limb plots. Tillandsia enhanced communities similarly in a survey across the southeastern United States. These findings reveal that a facilitation cascade organizes this widespread terrestrial assemblage and expand the role of secondary foundation species as drivers of trophic structure and ecosystem function. We conceptualize the relationship between foundation species' structural attributes and associated species abundance and composition in a Foundation Species-Biodiversity (FSB) model. Importantly, the FSB predicts that, where secondary foundation species form expansive and functionally distinct structures that increase habitat availability and complexity within primary foundation species, they generate and maintain hot spots of biodiversity and trophic interactions.

Comparisons between the characteristics of ichthyofaunas in nearshore waters of five estuaries with varying degrees of connectivity with the ocean

NASA Astrophysics Data System (ADS)

Hoeksema, S. D.; Chuwen, B. M.; Potter, I. C.

2009-10-01

The characteristics of the fish faunas in nearshore, shallow (<1.2 m) waters of the basins of estuaries along the same coastline, but which were open to the ocean for varying periods, have been determined and compared. The fish faunas of the permanently-open Oyster Harbour, the seasonally-open Broke, Irwin and Wilson inlets and the normally-closed Wellstead Estuary on the south coast of Western Australia were sampled by seine net seasonally for 2 years. Irrespective of the frequency and duration that the estuary mouth was open, the ichthyofauna of each estuary was numerically dominated by three atherinid species and three gobiid species (92.9-99.7%), each of which completes its life cycle within these estuaries. The ichthyofaunal compositions of each estuary differed significantly, however, from that of each other estuary. These differences were largely attributable to the relative abundances of the above six species varying between estuaries, which, in turn, reflected differences in such factors as estuary mouth status, macrophyte cover and salinity. For example, Favonigobius lateralis and Leptatherina presbyteroides, which are also represented by marine populations, were most abundant in the permanently-open estuary (Oyster Harbour), which, in terms of substrate and salinity, most closely resembled the nearshore marine environment. In contrast, Leptatherina wallacei made its greatest contribution in the only estuary to exhibit a protracted period of greatly reduced salinities, which is consistent with its distribution in permanently-open estuaries on the lower west coast of Australia, while Atherinosoma elongata and Pseudogobius olorum were particularly numerous in estuaries containing dense stands of the seagrass Ruppia megacarpa. Marine species made the greatest contribution to species richness in the permanently-open estuary and least in the normally-closed estuary. Species richness was greatest in summer and least in winter in each estuary, but differed markedly between years only in Wilson Inlet. Density of fishes was greatest in the most eutrophic estuary (Wellstead Estuary) and least in the most oligotrophic estuary (Broke Inlet) and only underwent marked seasonal variations in Wilson Inlet and Wellstead Estuary, in which densities fell to their minima in winter. Ichthyofaunal composition varied between years in the Broke and Wilson inlets and Wellstead Estuary, in which there was little or no connection with the ocean in one of those years. Species composition underwent progressive seasonal changes throughout the year in Wellstead Estuary, due to the abundance of certain species peaking at different times of the year.

Yeasts in floral nectar: a quantitative survey

PubMed Central

Herrera, Carlos M.; de Vega, Clara; Canto, Azucena; Pozo, María I.

2009-01-01

Background and Aims One peculiarity of floral nectar that remains relatively unexplored from an ecological perspective is its role as a natural habitat for micro-organisms. This study assesses the frequency of occurrence and abundance of yeast cells in floral nectar of insect-pollinated plants from three contrasting plant communities on two continents. Possible correlations between interspecific differences in yeast incidence and pollinator composition are also explored. Methods The study was conducted at three widely separated areas, two in the Iberian Peninsula (Spain) and one in the Yucatán Peninsula (Mexico). Floral nectar samples from 130 species (37–63 species per region) in 44 families were examined microscopically for the presence of yeast cells. For one of the Spanish sites, the relationship across species between incidence of yeasts in nectar and the proportion of flowers visited by each of five major pollinator categories was also investigated. Key Results Yeasts occurred regularly in the floral nectar of many species, where they sometimes reached extraordinary densities (up to 4 × 105 cells mm−3). Depending on the region, between 32 and 44 % of all nectar samples contained yeasts. Yeast cell densities in the order of 104 cells mm−3 were commonplace, and densities >105 cells mm−3 were not rare. About one-fifth of species at each site had mean yeast cell densities >104 cells mm−3. Across species, yeast frequency and abundance were directly correlated with the proportion of floral visits by bumble-bees, and inversely with the proportion of visits by solitary bees. Conclusions Incorporating nectar yeasts into the scenario of plant–pollinator interactions opens up a number of intriguing avenues for research. In addition, with yeasts being as ubiquitous and abundant in floral nectars as revealed by this study, and given their astounding metabolic versatility, studies focusing on nectar chemical features should carefully control for the presence of yeasts in nectar samples. PMID:19208669

Structure and composition of oligohaline marsh plant communities exposed to salinity pulses

USGS Publications Warehouse

Howard, R.J.; Mendelssohn, I.A.

2000-01-01

The response of two oligohaline marsh macrophyte communities to pulses of increased salinity was studied over a single growing season in a greenhouse experiment. The plant communities were allowed a recovery period in freshwater following the pulse events. The experimental treatments included: (1) salinity influx rate (rate of salinity increase from 0 to 12 gl-1); (2) duration of exposure to elevated salinity; and (3) water depth. The communities both included Sagittaria lancifolia L.; the codominant species were Eleocharis palustris (L.) Roemer and J.A. Schultes in community 1 and Schoenoplectus americanus (Pers.) Volk. ex Schinz and R. Keller in community 2. Effects of the treatments on sediment chemical characteristics (salinity, pH, redox potential, and sulfide and ammonium concentrations) and plant community attributes (aboveground and belowground biomass, stem density, leaf tissue nutrients, and species richness) were examined. The treatment effects often interacted to influence sediment and plant communities characteristics following recovery in fresh water. Salinity influx rate per se, however, had little effect on the abiotic or biotic response variables; significant influx effects were found when the 0 gl-1 (zero influx) treatment was compared to the 12 gl-1 treatments, regardless of the rate salinity was raised. A salinity level of 12 gl-1 had negative effects on plant community structure and composition; these effects were usually associated with 3 months of salinity exposure. Water depth often interacted with exposure duration, but increased water depth did independently decrease the values of some community response measures. Community 1 was affected more than community 2 in the most extreme salinity treatment (3 months exposure/15-cm water depth). Although species richness in both communities was reduced, structural changes were more dramatic in community 1. Biomass and stem density were reduced in community 1 overall and in both dominant species. Structural changes in community 2 consisted of reduced biomass and stem density in the community overall and in S. lancifolia; S. americanus was not affected by salinity. In this most extreme treatment, community 2 tended to change to a monospecific S. americanus stand while community 1 was reduced to a few surviving stems of secondary species. Our results suggest that vegetation recovery or establishment of new species following a temporary increase in soil water salinity will vary with exposure duration and water depth. (C) 2000 Elsevier Science B.V.

Phytoplankton species diversity indices in Anjanapura reservoir, Western Ghat region, India.

PubMed

Basavaraja, D; Narayana, J; Puttaiah, E T; Prakash, K

2013-07-01

A qualitative study on species composition and diversity of phytoplankton flora was carried out in the Anjanapura reservoir. Water samples were collected monthly at four sites from November 2005 to October 2007 for plankton analysis. A total of 152 phytoplankton species belonging to 59 genera were recorded. The species belonging to genera Crucigenia, Pediastrum, Scenedesmus, Tetraedron, Cyclotella, Gyrosigma, Melosira, Navicula, Fragillaria, pinnularia, Synedra, Closterium, Cosmarium, Euastrum, Staurastrum, Gleocapsa, Merismopedia, Microcystis, Oscillatoria, Euglena and Phacus were found dominant. Phytoplankton density was recorded in the range of 222-1467 Org l(-1) for chlorococcales, 267-1467 Org I (-1) for diatoms, 44-889 Org l(-1) for desmids, 44-889 Org l(-1) for blue-greens and 22-1667 Org l(-1) for euglenoids. Seasonal density Shannon-Weiner diversity index (1.60-1.88) indicate that reservoir exhibited rich phytoplankton and Nygaard tropic status indices for myxophycean (1.0-1.50), chlorophycean (1.62-2.16), diatoms (0.10-0.14), euglenophycean (0.18-0.19) and compound quotient(3.25-4.66) showed that reservoir was moderately polluted. From the observed data, it could be concluded that the presence of more diverse group of phytoplankton indicate the productivity of the reservoir.

Analysis of vegetation changes in Rock Creek Park, 1991-2007

USGS Publications Warehouse

Hatfield, Jeff S.; Krafft, Cairn

2009-01-01

Vegetation data collected at Rock Creek Park every 4 years during 1991-2007 were analyzed for differences among 3 regions within the park and among years. The variables measured and analyzed were percentage of twigs browsed, percentage of canopy cover, species richness of herbaceous plants, number of tree seedlings in each of 7 height classes, tree seedling stocking rate for low deer density and high deer density areas, percentage of tree and shrub cover < 2 m in height, mean diameter at breast height (DBH) of trees > 1 cm DBH, number of tree stems > 1 cm DBH, species richness of trees and shrubs, and mean height of the 5 tallest trees in each plot quadrant. Repeated measures analysis of variance (ANOVA) was used to test for differences and, except for some differences in tree species composition among the 3 regions, no differences (P > 0.01) were found among the 3 regions in the variables discussed above. Many of the variables showed very significant differences (P < 0.01) among years, and causative factors should be investigated further. In addition, importance values were calculated for the 10 most important tree species in each region and changes over time were reported. Future sampling recommendations are also discussed.

Comparison of model predictions for the composition of the ionosphere of Mars to MAVEN NGIMS data

NASA Astrophysics Data System (ADS)

Withers, Paul; Vogt, Marissa; Mayyasi, Majd; Mahaffy, Paul; Benna, Mehdi; Elrod, Meredith; Bougher, Stephen; Dong, Chuanfei; Chaufray, Jean-Yves; Ma, Yingjuan; Jakosky, Bruce

2015-11-01

Prior to the arrival of the Mars Atmosphere and Volatile EvolutioN (MAVEN) spacecraft at Mars, the only available measurements of the composition of the planet's ionosphere were those acquired by the two Viking Landers during their atmospheric entries. Many numerical models of the composition of the ionosphere of Mars have been developed, but these have only been validated for species, altitudes, and conditions for which Viking data exist. Here we compare the ionospheric composition and structure predicted by 10 ionospheric models at solar zenith angles of 45-60° against ion density measurements acquired by the MAVEN Neutral Gas and Ion Mass Spectrometer (NGIMS). The most successful models included three-dimensional plasma transport driven by interactions with the surrounding space environment but had relatively simple ionospheric chemistry.

Agave salmiana Plant Communities in Central Mexico as Affected by Commercial Use

NASA Astrophysics Data System (ADS)

Martínez Salvador, Martin; Mata-González, Ricardo; Morales Nieto, Carlos; Valdez-Cepeda, Ricardo

2012-01-01

Agave salmiana is a native plant species harvested for the commercial production of mezcal ( Agave spirits) in the highlands of central Mexico. The objective of this study was to identify vegetation changes in natural communities where A. salmiana has been differentially harvested for commercial purposes. Three plant community categories were identified in the state of Zacatecas based on their history of A. salmiana utilization: short (less than 10 years of use), moderate (about 25 years), and long (60 or more years). Species cover, composition, and density were evaluated in field surveys by use category. A gradient of vegetation structure of the communities parallels the duration of A. salmiana use. A. salmiana density was greatest (3,125 plants ha-1) in the short-use areas and less (892 plants ha-1) in the moderate-use areas, associated with markedly greater density of shrubs (200%) and Opuntia spp. (50%) in moderate-use areas. The main shrubs were Larrea tridentata, Mimosa biuncifera, Jatropha dioica and Buddleia scordioides while the main Opuntia species were Opuntia leucotricha and Opuntia robusta. A. salmiana density was least (652 plants ha-1) in the long-use areas where shrubs were less abundant but Opuntia spp. density was 25% higher than in moderate-use areas. We suggest that shrubs may increase with moderate use creating an intermediate successional stage that facilitates the establishment of Opuntia spp. Long-term Agave use is generating new plant communities dominated by Opuntia spp. (nopaleras) as a replacement of the original communities dominated by A. salmiana (magueyeras).

Agave salmiana plant communities in central Mexico as affected by commercial use.

PubMed

Martínez Salvador, Martin; Mata-González, Ricardo; Morales Nieto, Carlos; Valdez-Cepeda, Ricardo

2012-01-01

Agave salmiana is a native plant species harvested for the commercial production of mezcal (Agave spirits) in the highlands of central Mexico. The objective of this study was to identify vegetation changes in natural communities where A. salmiana has been differentially harvested for commercial purposes. Three plant community categories were identified in the state of Zacatecas based on their history of A. salmiana utilization: short (less than 10 years of use), moderate (about 25 years), and long (60 or more years). Species cover, composition, and density were evaluated in field surveys by use category. A gradient of vegetation structure of the communities parallels the duration of A. salmiana use. A. salmiana density was greatest (3,125 plants ha(-1)) in the short-use areas and less (892 plants ha(-1)) in the moderate-use areas, associated with markedly greater density of shrubs (200%) and Opuntia spp. (50%) in moderate-use areas. The main shrubs were Larrea tridentata, Mimosa biuncifera, Jatropha dioica and Buddleia scordioides while the main Opuntia species were Opuntia leucotricha and Opuntia robusta. A. salmiana density was least (652 plants ha(-1)) in the long-use areas where shrubs were less abundant but Opuntia spp. density was 25% higher than in moderate-use areas. We suggest that shrubs may increase with moderate use creating an intermediate successional stage that facilitates the establishment of Opuntia spp. Long-term Agave use is generating new plant communities dominated by Opuntia spp. (nopaleras) as a replacement of the original communities dominated by A. salmiana (magueyeras).

Restoration of Soils and Vegetation on Reclamation Sites of the Kingisepp Phosphorite Field

NASA Astrophysics Data System (ADS)

Dmitrakova, Ya. A.; Abakumov, E. V.

2018-05-01

Processes of initial soil formation were studied on long-term monitoring plots on dump rocks of quarry no. 3 of the Phosphorite production company in Kingisepp district of Leningrad oblast. Observations were performed in 1998, 2004, and 2014. It was shown that vegetation succession on the plots proceeds relatively quickly, and that the species composition of phytocenoses formed is typical of the areas with soddy-calcareous soils. Soil development proved to be correlated with the development of vegetation. Maximum changes in soil characteristics were observed with an increase in the density of forest vegetation and a decrease in the role of herbs. The molecular composition of humic acids in the studied soils remained stable; in particular, the ratio of aliphatic to alkyl aromatic fragments was virtually constant. This phenomenon could be due to the great amount of aliphatic components in the falloff of coniferous species subjected to humification.

The herb community of a tropical forest in central Panamá: dynamics and impact of mammalian herbivores.

PubMed

Royo, Alejandro A; Carson, Walter P

2005-08-01

Mammals are hypothesized to either promote plant diversity by preventing competitive exclusion or limit diversity by reducing the abundance of sensitive plant species through their activities as browsers or disturbance agents. Previous studies of herbivore impacts in plant communities have focused on tree species and ignored the herbaceous community. In an experiment in mature-phase, tropical moist forest sites in central Panamá, we studied the impact of excluding ground-dwelling mammals on the richness and abundance of herbs in 16, 30x45-m plots. Within each plot, we censused the herbaceous community in 28, 2x2-m subplots (1,792 m2 total area sampled). We identified over 54 species of herbs averaging 1.21 ramets m-2 and covering approximately 4.25% of the forest floor. Excluding mammals for 5 years had no impact on overall species richness. Within exclosures, however, there was a significant two-fold increase in the density of rare species. Overall herbaceous density and percent cover did not differ between exclosures and adjacent control plots, although cover did increase over time. Mammalian exclusion significantly increased the total cover of three-dominant herb species, Pharus latifolius, Calathea inocephala, and Adiantum lucidum, but did not affect their density. This study represents one of the most extensive herbaceous community censuses conducted in tropical forests and is among a few that quantify herbaceous distribution and abundance in terms of both density and cover. Additionally, this work represents the first community level test of mammalian impacts on the herbaceous community in a tropical forest to date. Our results suggest that ground dwelling mammals do not play a key role in altering the relative abundance patterns of tropical herbs in the short term. Furthermore, our results contrast sharply with prior studies on similar temporal and spatial scales that demonstrate mammals strongly alter tree seedling composition and reduce seedling density. Thus, we question the pervasiveness of top-down control on tropical plant communities and the paradigm that defaunation will inexorably lead to widespread, catastrophic shifts in plant communities.

Sourdough microbial community dynamics: An analysis during French organic bread-making processes.

PubMed

Lhomme, Emilie; Urien, Charlotte; Legrand, Judith; Dousset, Xavier; Onno, Bernard; Sicard, Delphine

2016-02-01

Natural sourdoughs are commonly used in bread-making processes, especially for organic bread. Despite its role in bread flavor and dough rise, the stability of the sourdough microbial community during and between bread-making processes is debated. We investigated the dynamics of lactic acid bacteria (LAB) and yeast communities in traditional organic sourdoughs of five French bakeries during the bread-making process and several months apart using classical and molecular microbiology techniques. Sourdoughs were sampled at four steps of the bread-making process with repetition. The analysis of microbial density over 68 sourdough/dough samples revealed that both LAB and yeast counts changed along the bread-making process and between bread-making runs. The species composition was less variable. A total of six LAB and nine yeast species was identified from 520 and 1675 isolates, respectively. The dominant LAB species was Lactobacillus sanfranciscensis, found for all bakeries and each bread-making run. The dominant yeast species changed only once between bread-making processes but differed between bakeries. They mostly belonged to the Kazachstania clade. Overall, this study highlights the change of population density within the bread-making process and between bread-making runs and the relative stability of the sourdough species community during bread-making process. Copyright © 2014 Elsevier Ltd. All rights reserved.

Seed rain dynamics following disturbance exclusion in a secondary tropical dry forest in Morelos, Mexico.

PubMed

Ceccon, Eliane; Hernández, Patricia

2009-01-01

In most of the legally protected areas in Mexico local inhabitants use natural resources, such as fire wood or cattle grazing. These frequent but low-intensity disturbances have consequences at various levels of the tropical ecosystems and strongly impact forest structure and its regeneration capacity. Despite their importance, the effects of these perturbations in many aspects of tropical forest ecology and in the forest's capacity to recover after disturbance exclusion remain poorly understood. Understanding the impact of these processes on tropical forests is necessary for rehabilitating these forests and enhancing their productivity. In this study, we evaluate the impact of twelve years of exclusion (E) of cattle grazing and fire wood extraction in the composition and dynamics of seed rain, and compare this assessment to a similar analysis in an area where these perturbations continued (without exclusion, WE). We found a strong seasonality in seed rain (96% of seeds fell in the dry season) in both areas. There were no significant differences between E and WE sites in relation to overall seed density, species richness and diversity. However, the distribution along the year of seed species density was significantly different among the E and WE sites. The Jaccard's similarity index between E and WE sites was relatively low (0.57). Barochory was the most common dispersal mode observed among the 23 species in terms of seed species density (48%), followed by anemochory (39%) and zoochory (13%). In relation to seed density, anemochory was the most frequent dispersal mode (88%). Most species in the zone were categorized as small seeds (92%), and there were no significant differences in the distribution of seed size between E and WE. The spatial pattern of dispersal of the four species with the highest relative importance value index, in both areas, was aggregated. Twelve years of disturbance exclusion were not enough to fully restore the seed rain of the area; some differences were already perceptible after this lapse. On the other hand, zoochorous species were almost absent from both sites. The re-introduction of climax and animal-dispersed species may be, in addition to perturbation exclusion, a viable strategy to accelerate ecological restoration in this area.

A multispecies framework for landscape conservation planning.

PubMed

Schwenk, W Scott; Donovan, Therese M

2011-10-01

Rapidly changing landscapes have spurred the need for quantitative methods for conservation assessment and planning that encompass large spatial extents. We devised and tested a multispecies framework for conservation planning to complement single-species assessments and ecosystem-level approaches. Our framework consisted of 4 elements: sampling to effectively estimate population parameters, measuring how human activity affects landscapes at multiple scales, analyzing the relation between landscape characteristics and individual species occurrences, and evaluating and comparing the responses of multiple species to landscape modification. We applied the approach to a community of terrestrial birds across 25,000 km(2) with a range of intensities of human development. Human modification of land cover, road density, and other elements of the landscape, measured at multiple spatial extents, had large effects on occupancy of the 67 species studied. Forest composition within 1 km of points had a strong effect on occupancy of many species and a range of negative, intermediate, and positive associations. Road density within 1 km of points, percent evergreen forest within 300 m, and distance from patch edge were also strongly associated with occupancy for many species. We used the occupancy results to group species into 11 guilds that shared patterns of association with landscape characteristics. Our multispecies approach to conservation planning allowed us to quantify the trade-offs of different scenarios of land-cover change in terms of species occupancy. Conservation Biology © 2011 Society for Conservation Biology. No claim to original US government works.

[Characteristics of soil seed banks in logging gaps of forests at different succession stages in Changbai Mountains].

PubMed

Zhang, Zhi-Ting; Song, Xin-Zhang; Xiao, Wen-Fa; Gao, Bao-Jia; Guo, Zhong-Ling

2009-06-01

An investigation was made on the soil seed banks in the logging gaps of Populus davidiana--Betula platyphylla secondary forest, secondary broad-leaved forest, and broad-leaved Korean pine mixed forest at their different succession stages in Changbai Mountains. Among the test forests, secondary broad-leaved forest had the highest individual density (652 ind x m(-2)) in its soil seed bank. With the succession of forest community, the diversity and uniformity of soil seed bank increased, but the dominance decreased. The seed density of climax species such as Pinus koraiensis, Abies nephrolepis, and Acer mono increased, whereas that of Maackia amurensis and Fraxinus mandshurica decreased. Moreover, the similarity in species composition between soil seed bank and the seedlings within logging gaps became higher. The individual density and similarity between soil seed bank and the seedlings in non-logging gaps were similar to those in logging gaps. All of these indicated that soil seed bank provided rich seed resources for forest recovery and succession, and the influence of soil seed bank on seedlings regeneration increased with the succession.

F region above Kauai - Measurement, model, modification

NASA Technical Reports Server (NTRS)

Johnson, C. Y.; Sjolander, G. W.; Oran, E. S.; Young, T. R.; Bernhardt, P. A.; Da Rosa, A. V.

1980-01-01

Results of the Lagopedo II experiment conducted from Kauai, Hawaii to investigate the ionospheric modification that occurs when rocket combustion products are introduced into the O(+)-rich F region are presented. The experiment involved the detonation of a chemical explosion in the F2 peak accompanied by rocket-borne measurements of ion composition and electron content in the vicinity of the explosion. The experimental data is found to be in good agreement with the predictions of a model of the nighttime ion densities in the midlatitude laminar ionosphere, with the exception of N2(+) densities before the explosion. H2O(+) and H3O(+) currents produced by considerable H2O outgassing from the rocket are used to determine a H3O(+)/H2O(+) dissociative recombination rate averaging 1.6 to 1.08, depending on model assumptions. At the time of the explosion, an ionic void 1 km in radius is observed, the boundary of which is characterized by a steep gradient in ionic densities. Evidence of variations in the concentrations of ambient ion species, new reactant species and ionic depletion by sweeping is also obtained.

Stomatal Density Influences Leaf Water and Leaf Wax D/H Values in Arabidopsis

NASA Astrophysics Data System (ADS)

Lee, H.; Feakins, S. J.; Sternberg, L. O.

2014-12-01

The hydrogen isotopic composition (δD) of plant leaf wax is a powerful tool to study the hydrology of past and present environments. The δD value of leaf waxes is known to primarily reflect the δD value of source water, modified by biological fractionations commonly summarized as the 'net or apparent' fractionation. It remains a challenge, however, to quantitatively relate the isotopic composition of the end product (wax) back to that of the precursor (water) because multiple isotope effects contributing to the net fractionation are not yet well understood. Transgenic variants have heretofore unexplored potential to isolate individual isotope effects. Here we report the first hydrogen isotopic measurements from transgenic Arabidopsis thaliana plants with calculations of leaf water enrichment, net and biosynthetic fractionation values from measured δD of plant waters and leaf wax n-alkanes. We employed transgenic Arabidopsis leaves, engineered to have different stomatal density, by differential expression of the stomatal growth hormone stomagen. Comparison of variants and wild types allow us to isolate the effects of stomatal density on leaf water and the net fractionation expressed by leaf wax biomarkers. Results show that transgenic leaves with denser pores have more enriched leaf water and leaf wax δD values than wild type and even more so than transgenic leaves with sparse stomata (difference of 10 ‰). Our findings that stomatal density controls leaf water and leaf wax δD values adds insights into the cause of variations in net fractionations between species, as well as suggesting that geological variations in stomatal density may modulate the sedimentary leaf wax δD record. In nature, stomatal density varies between species and environments, and all other factors being equal, this will contribute to variations in fractionations observed. Over geological history, lower stomatal densities occur at times of elevated pCO2; our findings predict reduced leaf water isotopic enrichment and larger net fractionations during these greenhouse conditions. Future work involving transgenic plants holds considerable potential to isolate additional factors which may influence the net fractionation between source water and leaf waxes adding to our fundamental understanding of this proxy.

The long-term effects of UV exclusion on the microbial composition and photosynthetic competence of bacteria in hot-spring microbial mats.

PubMed

Norris, Tracy B; McDermott, Timothy R; Castenholz, Richard W

2002-03-01

The primary objective of this study was to determine whether the long-term exclusion of ultraviolet (UV) radiation (UVR) from hot-spring microbial mats resulted in an alteration of microbial composition, such as a shift to more UV-sensitive species. Over a 1-3-month period, microbial mats in two alkaline geothermal streams in Yellowstone National Park were covered with filters that excluded or transmitted UVR. Over some, 25% transmission neutral density screens were also used. In the 40-47 degrees C range, there were no apparent changes in community composition during the summer with or without high or low UVR, as assessed by denaturing gradient gel electrophoresis (DGGE) profiles after polymerase chain reaction amplification of 16S-rRNA genes with general Bacteria and Cyanobacteria primers. Major bands were purified from the DGGE gels and sequenced. Only one of the cyanobacterial sequences matched known strains in the database; the others appear to be unique. Although the bacterial composition of these communities was apparently stable, surface layers of cyanobacteria protected from UVR were not as competent photosynthetically as those that had been maintained under UVR. This decrease in competence was expressed as a loss of the ability to perform at a maximum rate under full UVR plus visible irradiance. However, even +UV-maintained cyanobacteria performed better when UVR was excluded during the photosynthesis tests. It is probable that the large differences in photosynthetic competence observed reflect changes at the level of gene expression in the dominant species rather than changes in species composition.

Study of Culex tritaeniorhynchus and species composition of mosquitoes in a rice field in Greece.

PubMed

Lytra, Ioanna; Emmanouel, Nikolaos

2014-06-01

Mosquito species composition and seasonal abundance were studied in a rice field in western Greece over a three-year period (2009-2011). A total of 11,716 larvae and pupae of mosquitoes were recorded, representing seven species, namely Aedes caspius (Pallas), Anopheles hyrcanus (Pallas), Anopheles sacharovi Favre, Culex theileri Theobald, Culex tritaeniorhynchus Giles, Culex pipiens Linnaeus, Uranotaenia unguiculata Edwards and belonging to four genera. Cx. tritaeniorhynchus constituted the most abundant species. It is the second recorded occurrence of this species in Greece, but the first time that a high population of this mosquito species is recorded in the country. In all three years, the total population density of mosquitoes was found to be higher in early August. The number of immatures of all species was found higher in 2009 and 2010 than in 2011, as well was that of the Cx. tritaeniorhynchus adults derived from the rearing of the collected immatures. This regularity is probably due to the lack of water in the rice field in early August 2011. Cx. tritaeniorhynchus was found to be the most abundant species after the rearing of immatures representing 85.1%, 93.5% and 96.1% of the total number of the mosquito adults in 2009, 2010 and 2011, respectively. The rice culturing practices may have affected the seasonal occurrence of mosquito immatures in all of the study years. Copyright © 2014 Elsevier B.V. All rights reserved.

Environmental studies conducted at the Fenton Hill Hot Dry Rock geothermal development site

DOE Office of Scientific and Technical Information (OSTI.GOV)

Miera, F.R. Jr.; Langhorst, G.; McEllin, S.

1984-05-01

An environmental investigation of Hot Dry Rock (HDR) geothermal development was conducted at Fenton Hill, New Mexico, during 1976-1979. Activities at the Fenton Hill Site included an evaluation of baseline data for biotic and abiotic ecosystem components. Identification of contaminants produced by HDR processes that had the potential for reaching the surrounding environment is also discussed. Three dominant vegetative communities were identified in the vicinity of the site. These included grass-forb, aspen, and mixed conifer communities. The grass-forb area was identified as having the highest number of species encountered, with Phleum pratense and Dactylis glomerata being the dominant grass species.more » Frequency of occurrence and mean coverage values are also given for other species in the three main vegetative complexes. Live trapping of small mammals was conducted to determine species composition, densities, population, and diversity estimates for this component of the ecosystem. The data indicate that Peromyscus maniculatus was the dominant species across all trapping sites during the study. Comparisons of relative density of small mammals among the various trapping sites show the grass-forb vegetative community to have had the highest overall density. Comparisons of small mammal diversity for the three main vegetative complexes indicate that the aspen habitat had the highest diversity and the grass-forb habitat had the lowest. Analyses of waste waters from the closed circulation loop indicate that several trace contaminants (e.g., arsenic, cadmium, fluoride, boron, and lithium) were present at concentrations greater than those reported for surface waters of the region.« less

Are the long-term effects of mesobrowsers on woodland dynamics substitutive or additive to those of elephants?

NASA Astrophysics Data System (ADS)

O'Kane, Christopher A. J.; Duffy, Kevin J.; Page, Bruce R.; Macdonald, David W.

2011-09-01

The large spectrum of existing literature on browser-woodland dynamics, both from savanna and temperate biomes, converges towards concluding that all browsers importantly impact woody plants. In this context a crucial question in the current debate about reintroducing elephant culling, is whether the long-term effects of elephants and mesobrowsers are similar. If the two groups impact the same woody species in the same habitats, sufficiently high biomass-densities of mesobrowsers may, following removal of elephants, continue to heavily impact earlier life-history stages of the same suite of woody plants that elephant impacted, preventing these species from maturing. Thus, as existing mature trees die from natural causes and fade from the system, a similar end-point for woodland structure and composition is achieved. We reviewed 49 years of literature on the savanna browser guild, performing a meta-analysis on the disparate data on the guild's woody plant species use (3677 records) and habitat use (894 records). Mesobrowsers' and elephants' extensive overlap in habitat use and staple woody species diet, together with evidence of their influencing each others' abundance and of their dietary separation increasing with resource depletion, implies that the two groups impact the same core woody species in the same habitats. It therefore seems probable that high biomass-density mesobrowsers may have a long-term substitutive effect to that of elephant on woodland dynamics. Consequently management wanting a particular state of savanna woodland, should consider the biomass-density of both groups, rather than just focus on the system's perceived keystone species. Such principles may also apply to temperate and other systems.

Logging damage to residual trees following partial cutting in a green ash-sugarberry stand in the Mississippi Delta

Treesearch

James S. Meadows

1993-01-01

Partial cutting in bottomland hardwoods to control stand density and species composition sometimes results in logging damage to the lower bole and/or roots of residual trees. If severe, logging damage may lead to a decline in tree vigor, which may subsequently stimulate the production of epicormic branches, causing a decrease in bole quality and an eventual loss in...

Logging Damage to Residual Trees Following Partial Cutting in a Green Ash-Sugarberry Stand in the Mississippi Delta

Treesearch

James S. Meadows

1993-01-01

Partial cutting in bottomland hardwoods to control stand density and species composition sometimes results in logging damage to the lower bole and/or roots of residual trees. If severe, logging damage may lead to a decline in tree vigor, which may subsequently stimulate the production of epicormic branches, causing a decrease in bole quality and an eventual loss in...

Changes in non-pine woody species density, composition, and diversity following herbicide and fertilization application to mid-rotation loblolly pine stands

Treesearch

Hal O. Liechty; Conner Fristoe

2012-01-01

We monitored woody vegetation (dbh>1.0 in) response for up to six years following a herbicide (16 ounces imazapyr /acre), a fertilizer (365 pounds urea and 175 pounds diammonium phosphate/acre ) and a combined fertilizer and herbicide application in four mid-rotation loblolly pine stands located within the Upper Gulf Coastal Plain in Arkansas. Approximately 60-80%...

Environmental Assessment with Finding of No Significant Impact (EA/FONSI) for New Mobile Aircraft Fire Trainer

DTIC Science & Technology

2010-04-23

communities. The major compositional trend of the vegetation over time is toward an increased density of conifers , especially in the Montane zone...important plant or animal species; interfered substantially with wildlife movement or reproductive behavior; resulted in a substantial infusion of...with wildlife movement or reproductive behavior. The MAFT site is adjacent to know PMJM habitat. Potential impacts to vegetation would not be

Hurricane recovery at Cabezas de San Juan, Puerto Rico, and research opportunities at Conservation Trust Reserves

Treesearch

Peter L. Weaver; Elizabeth Padilla Rodriguez

2009-01-01

The Cabezas de San Juan Natural Reserve (El Faro), an exposed peninsular area located in the Subtropical dry forest of northeastern Puerto Rico, was impacted by hurricanes Hugo (1989) and Georges (1998). From 1998 to 2008, a 0.10 ha plot was used to assess forest structure, species composition, and stem growth. During post-hurricane recovery, stem density, tree height...

Species composition, larval habitats, seasonal occurrence and distribution of potential malaria vectors and associated species of Anopheles (Diptera: Culicidae) from the Republic of Korea

PubMed Central

2010-01-01

Background Larval mosquito habitats of potential malaria vectors and related species of Anopheles from three provinces (Gyeonggi, Gyeongsangbuk, Chungcheongbuk Provinces) of the Republic of Korea were surveyed in 2007. This study aimed to determine the species composition, seasonal occurrence and distributions of Anopheles mosquitoes. Satellite derived normalized difference vegetation index data (NDVI) was also used to study the seasonal abundance patterns of Anopheles mosquitoes. Methods Mosquito larvae from various habitats were collected using a standard larval dipper or a white plastic larval tray, placed in plastic bags, and were preserved in 100% ethyl alcohol for species identification by PCR and DNA sequencing. The habitats in the monthly larval surveys included artificial containers, ground depressions, irrigation ditches, drainage ditches, ground pools, ponds, rice paddies, stream margins, inlets and pools, swamps, and uncultivated fields. All field-collected specimens were identified to species, and relationships among habitats and locations based on species composition were determined using cluster statistical analysis. Results In about 10,000 specimens collected, eight species of Anopheles belonging to three groups were identified: Hyrcanus Group - Anopheles sinensis, Anopheles kleini, Anopheles belenrae, Anopheles pullus, Anopheles lesteri, Anopheles sineroides; Barbirostris Group - Anopheles koreicus; and Lindesayi Group - Anopheles lindesayi japonicus. Only An. sinensis was collected from all habitats groups, while An. kleini, An. pullus and An. sineroides were sampled from all, except artificial containers. The highest number of Anopheles larvae was found in the rice paddies (34.8%), followed by irrigation ditches (23.4%), ponds (17.0%), and stream margins, inlets and pools (12.0%). Anopheles sinensis was the dominant species, followed by An. kleini, An. pullus and An. sineroides. The monthly abundance data of the Anopheles species from three locations (Munsan, Jinbo and Hayang) were compared against NDVI and NDVI anomalies. Conclusion The species composition of Anopheles larvae varied in different habitats at various locations. Anopheles populations fluctuated with the seasonal dynamics of vegetation for 2007. Multi-year data of mosquito collections are required to provide a better characterization of the abundance of these insects from year to year, which can potentially provide predictive capability of their population density based on remotely sensed ecological measurements. PMID:20163728

Negative effect of litter of invasive weed Lantana camara on structure and composition of vegetation in the lower Siwalik Hills, northern India.

PubMed

Singh, Harminder Pal; Batish, Daizy R; Dogra, Kuldip Singh; Kaur, Shalinder; Kohli, Ravinder Kumar; Negi, Anjana

2014-06-01

Lantana camara, an aromatic shrub, native to tropical America, was introduced into India for ornamental hedging, but later escaped and became a serious invasive weed. This study assessed the quantitative and qualitative status of plant community richness and diversity in areas invaded by L. camara in the Siwalik Hills (Himachal Pradesh, India), and explored allelopathy as a possible mechanism of interference. We measured species diversity, richness and evenness of the vegetation in areas invaded and uninvaded by L. camara. Allelopathic effects of L. camara rhizosphere soil and litter were assessed against two native plants-Achyranthes aspera (a herb) and Albizia lebbeck (a tree). Density, biomass and indices of diversity, richness and evenness were reduced by L. camara, indicating a significant alteration in composition and structure of native communities. Seedling growth of the test species was reduced in L. camara rhizosphere- and litter-amended soil. The inhibitory effect was ameliorated by the addition of activated charcoal, indicating the presence of organic inhibitors (quantified as phenolics) in the soil. Lantana invasion greatly reduces the density and diversity of the vegetation in the invaded area, and chemical interference of its litter plays an important role in invasion.

Settling equivalence of detrital minerals and grain-size dependence of sediment composition

NASA Astrophysics Data System (ADS)

Garzanti, Eduardo; Andò, Sergio; Vezzoli, Giovanni

2008-08-01

This study discusses the laws which govern sediment deposition, and consequently determine size-dependent compositional variability. A theoretical approach is substantiated by robust datasets on major Alpine, Himalayan, and African sedimentary systems. Integrated (bulk-petrography, heavy-mineral, X-ray powder diffraction) multiple-window analyses at 0.25ϕ to 0.50ϕ sieve interval of eighty-five fluvial, beach, and eolian-dune samples, ranging from very fine silt to coarse sand, document homologous intrasample compositional trends, revealed by systematic concentration of denser grains in finer-grained fractions (“size-density sorting”). These trends are explained by the settling-equivalence principle, stating that detrital minerals are deposited together if their settling velocity is the same. Settling of silt is chiefly resisted by fluid viscosity, and Stokes' law predicts that size differences between detrital minerals in ϕ units (“size shifts”) are half the difference between the logarithms of their submerged densities. Settling of pebbles is chiefly resisted by turbulence effects, and the Impact law predicts double size shifts than Stokes' law. Settling of sand is resisted by both viscosity and turbulence, the settling-equivalence formula is complex, and size shifts increase - with increasing settling velocity and grain size - from those predicted by Stokes' law to those predicted by the Impact law. In wind-laid sands, size shifts match those predicted by the Impact law; size-density sorting is thus greater than in water-laid fine sands. New analytical, graphical, and statistical techniques for rigorous settling-equivalence analysis of terrigenous sediments are illustrated. Deviations associated with non-spherical shape, density anomalies, inheritance from source rocks, or mixing of detrital species with contrasting provenance and different size distribution are also tentatively assessed. Such integrated theoretical and experimental approach allows us to mathematically predict intrasample compositional variability of water-laid and wind-laid sediments, once the density of detrital components is known.

Influences of sea ice on eastern Bering Sea phytoplankton

NASA Astrophysics Data System (ADS)

Zhou, Qianqian; Wang, Peng; Chen, Changping; Liang, Junrong; Li, Bingqian; Gao, Yahui

2015-03-01

The influence of sea ice on the species composition and cell density of phytoplankton was investigated in the eastern Bering Sea in spring 2008. Diatoms, particularly pennate diatoms, dominated the phytoplankton community. The dominant species were Grammonema islandica (Grunow in Van Heurck) Hasle, Fragilariopsis cylindrus (Grunow) Krieger, F. oceanica (Cleve) Hasle, Navicula vanhoeffenii Gran, Thalassiosira antarctica Comber, T. gravida Cleve, T. nordenskiöeldii Cleve, and T. rotula Meunier. Phytoplankton cell densities varied from 0.08×104 to 428.8×104 cells/L, with an average of 30.3×104 cells/L. Using cluster analysis, phytoplankton were grouped into three assemblages defined by ice-forming conditions: open water, ice edge, and sea ice assemblages. In spring, when the sea ice melts, the phytoplankton dispersed from the sea ice to the ice edge and even into open waters. Thus, these phytoplankton in the sea ice may serve as a "seed bank" for phytoplankton population succession in the subarctic ecosystem. Moreover, historical studies combined with these results suggest that the sizes of diatom species have become smaller, shifting from microplankton to nannoplankton-dominated communities.

Thermodynamic properties and transport coefficients of two-temperature helium thermal plasmas

NASA Astrophysics Data System (ADS)

Guo, Xiaoxue; Murphy, Anthony B.; Li, Xingwen

2017-03-01

Helium thermal plasmas are in widespread use in arc welding and many other industrial applications. Simulation of these processes relies on accurate plasma property data, such as plasma composition, thermodynamic properties and transport coefficients. Departures from LTE (local thermodynamic equilibrium) generally occur in some regions of helium plasmas. In this paper, properties are calculated allowing for different values of the electron temperature, T e, and heavy-species temperature, T h, at atmospheric pressure from 300 K to 30 000 K. The plasma composition is first calculated using the mass action law, and the two-temperature thermodynamic properties are then derived. The viscosity, diffusion coefficients, electrical conductivity and thermal conductivity of the two-temperature helium thermal plasma are obtained using a recently-developed method that retains coupling between electrons and heavy species by including the electron-heavy-species collision term in the heavy-species Boltzmann equation. It is shown that the viscosity and the diffusion coefficients strongly depend on non-equilibrium ratio θ (θ ={{T}\\text{e}}/{{T}\\text{h}} ), through the plasma composition and the collision integrals. The electrical conductivity, which depends on the electron number density and ordinary diffusion coefficients, and the thermal conductivity have similar dependencies. The choice of definition of the Debye length is shown to affect the electrical conductivity significantly for θ  >  1. By comparing with literature data, it is shown that the coupling between electrons and heavy species has a significant influence on the electrical conductivity, but not on the viscosity. Plasma properties are tabulated in the supplementary data.

Yearly fluctuations of flower landscape in a Mediterranean scrubland: Consequences for floral resource availability.

PubMed

Flo, Víctor; Bosch, Jordi; Arnan, Xavier; Primante, Clara; Martín González, Ana M; Barril-Graells, Helena; Rodrigo, Anselm

2018-01-01

Species flower production and flowering phenology vary from year to year due to extrinsic factors. Inter-annual variability in flowering patterns may have important consequences for attractiveness to pollinators, and ultimately, plant reproductive output. To understand the consequences of flowering pattern variability, a community approach is necessary because pollinator flower choice is highly dependent on flower context. Our objectives were: 1) To quantify yearly variability in flower density and phenology; 2) To evaluate whether changes in flowering patterns result in significant changes in pollen/nectar composition. We monitored weekly flowering patterns in a Mediterranean scrubland community (23 species) over 8 years. Floral resource availability was estimated based on field measures of pollen and nectar production per flower. We analysed inter-annual variation in flowering phenology (duration and date of peak bloom) and flower production, and inter-annual and monthly variability in flower, pollen and nectar species composition. We also investigated potential phylogenetic effects on inter-annual variability of flowering patterns. We found dramatic variation in yearly flower production both at the species and community levels. There was also substantial variation in flowering phenology. Importantly, yearly fluctuations were far from synchronous across species, and resulted in significant changes in floral resources availability and composition at the community level. Changes were especially pronounced late in the season, at a time when flowers are scarce and pollinator visitation rates are particularly high. We discuss the consequences of our findings for pollinator visitation and plant reproductive success in the current scenario of climate change.

Yearly fluctuations of flower landscape in a Mediterranean scrubland: Consequences for floral resource availability

PubMed Central

Primante, Clara; Martín González, Ana M.; Barril-Graells, Helena

2018-01-01

Species flower production and flowering phenology vary from year to year due to extrinsic factors. Inter-annual variability in flowering patterns may have important consequences for attractiveness to pollinators, and ultimately, plant reproductive output. To understand the consequences of flowering pattern variability, a community approach is necessary because pollinator flower choice is highly dependent on flower context. Our objectives were: 1) To quantify yearly variability in flower density and phenology; 2) To evaluate whether changes in flowering patterns result in significant changes in pollen/nectar composition. We monitored weekly flowering patterns in a Mediterranean scrubland community (23 species) over 8 years. Floral resource availability was estimated based on field measures of pollen and nectar production per flower. We analysed inter-annual variation in flowering phenology (duration and date of peak bloom) and flower production, and inter-annual and monthly variability in flower, pollen and nectar species composition. We also investigated potential phylogenetic effects on inter-annual variability of flowering patterns. We found dramatic variation in yearly flower production both at the species and community levels. There was also substantial variation in flowering phenology. Importantly, yearly fluctuations were far from synchronous across species, and resulted in significant changes in floral resources availability and composition at the community level. Changes were especially pronounced late in the season, at a time when flowers are scarce and pollinator visitation rates are particularly high. We discuss the consequences of our findings for pollinator visitation and plant reproductive success in the current scenario of climate change. PMID:29346453

A search for stability gradients in North American breeding bird communities

USGS Publications Warehouse

Noon, B.R.; Dawson, D.K.; Kelly, J.P.

1985-01-01

To search for the existence of stability gradients in North American breeding land bird communities we operationally defined stability (after Jarvinen 1979) as year-to-year persistence in species composition and distribution of species abundances. From the census data for 174 study plots we derived nine indices that estimate the annual variability of species composition, the species abundance distribution, diversity, and breeding density. The resulting matrix of study plot by stability indices was used to estimate the correlation structure of the stability indices. The correlation matrix was, in turn, subjected to a principal components analysis to derive synthetic gradients of variation. We then searched for patterns of variation in these stability gradients associated with either geographic location or habitat type. Three independent principal component axes reproduced most of the variation in the initial data and were interpreted as gradients of variation in species turnover, diversity, and breeding abundance. Thus, the annual stability of community structure apparently responds independently to species and abundance variation. Despite the clarity of the derived gradients, few patterns emerged when the plots were ordinated by either habitat or geographic location. In general, grasslands showed greater annual variation in diversity than forested habitats, and, for some habitats, northern communities were less stable than more southern communities. However, few of these patterns were very strong, and we interpret them cautiously.

Vegetation types, dominant compositions, woody plant diversity and stand structure in Trishna Wildlife Sanctuary of Northeast India.

PubMed

Majumdar, Koushik; Datta, B K

2015-03-01

Present study was carried out to assess the vegetation types, diversity and phytosociological status of woody plants in Trishna Wildlife Sanctuary of Tripura, Northeast India. Vegetation data was derived by 25 line transects (10 m wide and 500 m length, each 0.5 ha size). All woody species at >10 cm gbh (Girth at Breast Height) within each plots were measured and counted. A total of six forest types were classified by cluster analysis using Importance Value Index (IVI) of 289 woody species. Species diversity, forest structure and woody community associations were evaluated and discussed. One way ANOVA revealed significant differences in all species diversity measures and stand structure along the forest types. Distribution of stem density at ten different gbh classes showed reverse J-shaped curves. Population status of woody plants was also examined through grouping of all individuals into four population age stages viz. sapling (<30 cm gbh), adult (> or = 30 - <120 cm gbh), mature (>120 - 210 cm gbh) and old (> or =210 cm). To observe dominant composition and species population trend, IVI of top ten dominant species from all forest types were tabulated. The present study suggested that Trishna Wildlife Sanctuary is an important habitat in Tripura from floristic point of view and it should be conserved on priority basis for remaining wildlife endurances and monitor for forest livelihoods products for sustainable biodiversity conservation in this region.

Elemental X-ray mapping of agglutinated foraminifer tests: A non- destructive technique for determining compositional characteristics.

USGS Publications Warehouse

Commeau, R.F.; Reynolds, Leslie A.; Poag, C.W.

1985-01-01

The composition of agglutinated foraminiferal tests vary remarkably in response to local substrate characteristics, physiochemical properties of the water column and species- dependant selectivity of test components. We have employed a technique that combines a scanning electron microscope with an energy dispersive X-ray spectrometer system to identify major and minor elemental constituents of agglutinated foraminiferal walls. As a sample is bombarded with a beam of high energy electrons, X-rays are generated that are characteristic of the elements present. As a result, X- ray density maps can be produced for each of several elements present in the tests of agglutinated foraminifers. 

Rumen ciliate protozoa of domestic sheep (Ovis aries) and goat (Capra aegagrus hircus) in Kyrgyzstan.

PubMed

Gürelli, Gözde; Canbulat, Savaş; Aldayarov, Nurbek; Dehority, Burk A

2016-03-01

Species composition and concentration of rumen ciliate protozoa were investigated in the rumen contents of 14 domestic sheep and 1 goat living in Bishkek, Kyrgyzstan. This is the first report on rumen ciliates from ruminants living in Kyrgyzstan. In sheep 12 genera, 28 species and 12 morphotypes were detected, whereas in goat 8 genera, 12 species and 4 morphotypes were detected. The density of ciliates in sheep was (28.1 ± 20.0) × 10(4) cells mL(-1) and in goat was 37.0 × 10(4) cells mL(-1). Dasytricha ruminantium, Isotricha prostoma, Entodinium simulans and Ophryoscolex caudatus were major species (100%) in sheep, and for the first time, Diplodinium rangiferi was detected in a domestic goat. © FEMS 2016. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

High-throughput, Highly Sensitive Analyses of Bacterial Morphogenesis Using Ultra Performance Liquid Chromatography*

PubMed Central

Desmarais, Samantha M.; Tropini, Carolina; Miguel, Amanda; Cava, Felipe; Monds, Russell D.; de Pedro, Miguel A.; Huang, Kerwyn Casey

2015-01-01

The bacterial cell wall is a network of glycan strands cross-linked by short peptides (peptidoglycan); it is responsible for the mechanical integrity of the cell and shape determination. Liquid chromatography can be used to measure the abundance of the muropeptide subunits composing the cell wall. Characteristics such as the degree of cross-linking and average glycan strand length are known to vary across species. However, a systematic comparison among strains of a given species has yet to be undertaken, making it difficult to assess the origins of variability in peptidoglycan composition. We present a protocol for muropeptide analysis using ultra performance liquid chromatography (UPLC) and demonstrate that UPLC achieves resolution comparable with that of HPLC while requiring orders of magnitude less injection volume and a fraction of the elution time. We also developed a software platform to automate the identification and quantification of chromatographic peaks, which we demonstrate has improved accuracy relative to other software. This combined experimental and computational methodology revealed that peptidoglycan composition was approximately maintained across strains from three Gram-negative species despite taxonomical and morphological differences. Peptidoglycan composition and density were maintained after we systematically altered cell size in Escherichia coli using the antibiotic A22, indicating that cell shape is largely decoupled from the biochemistry of peptidoglycan synthesis. High-throughput, sensitive UPLC combined with our automated software for chromatographic analysis will accelerate the discovery of peptidoglycan composition and the molecular mechanisms of cell wall structure determination. PMID:26468288

Introducing catalyst in alkaline membrane for improved performance direct borohydride fuel cells

NASA Astrophysics Data System (ADS)

Qin, Haiying; Lin, Longxia; Chu, Wen; Jiang, Wei; He, Yan; Shi, Qiao; Deng, Yonghong; Ji, Zhenguo; Liu, Jiabin; Tao, Shanwen

2018-01-01

A catalytic material is introduced into the polymer matrix to prepare a novel polymeric alkaline electrolyte membrane (AEM) which simultaneously increases ionic conductivity, reduces the fuel cross-over. In this work, the hydroxide anion exchange membrane is mainly composed of poly(vinylalcohol) and alkaline exchange resin. CoCl2 is added into the poly(vinylalcohol) and alkaline exchange resin gel before casting the membrane to introduce catalytic materials. CoCl2 is converted into CoOOH after the reaction with KOH solution. The crystallinity of the polymer matrix decreases and the ionic conductivity of the composite membrane is notably improved by the introduction of Co-species. A direct borohydride fuel cell using the composite membrane exhibits an open circuit voltage of 1.11 V at 30 °C, which is notably higher than that of cells using other AEMs. The cell using the composite membrane achieves a maximum power density of 283 mW cm-2 at 60 °C while the cell using the membrane without Co-species only reaches 117 mW cm-2 at the same conditions. The outstanding performance of the cell using the composite membrane benefits from impregnation of the catalytic Co-species in the membrane, which not only increases the ionic conductivity but also reduces electrode polarization thus improves the fuel cell performance. This work provides a new approach to develop high-performance fuel cells through adding catalysts in the electrolyte membrane.

Influence of matrix type on tree community assemblages along tropical dry forest edges.

PubMed

Benítez-Malvido, Julieta; Gallardo-Vásquez, Julio César; Alvarez-Añorve, Mariana Y; Avila-Cabadilla, Luis Daniel

2014-05-01

• Anthropogenic habitat edges have strong negative consequences for the functioning of tropical ecosystems. However, edge effects on tropical dry forest tree communities have been barely documented.• In Chamela, Mexico, we investigated the phylogenetic composition and structure of tree assemblages (≥5 cm dbh) along edges abutting different matrices: (1) disturbed vegetation with cattle, (2) pastures with cattle and, (3) pastures without cattle. Additionally, we sampled preserved forest interiors.• All edge types exhibited similar tree density, basal area and diversity to interior forests, but differed in species composition. A nonmetric multidimensional scaling ordination showed that the presence of cattle influenced species composition more strongly than the vegetation structure of the matrix; tree assemblages abutting matrices with cattle had lower scores in the ordination. The phylogenetic composition of tree assemblages followed the same pattern. The principal plant families and genera were associated according to disturbance regimes as follows: pastures and disturbed vegetation (1) with cattle and (2) without cattle, and (3) pastures without cattle and interior forests. All habitats showed random phylogenetic structures, suggesting that tree communities are assembled mainly by stochastic processes. Long-lived species persisting after edge creation could have important implications in the phylogenetic structure of tree assemblages.• Edge creation exerts a stronger influence on TDF vegetation pathways than previously documented, leading to new ecological communities. Phylogenetic analysis may, however, be needed to detect such changes. © 2014 Botanical Society of America, Inc.

Season, but not symbiont state, drives microbiome structure in the temperate coral Astrangia poculata.

PubMed

Sharp, Koty H; Pratte, Zoe A; Kerwin, Allison H; Rotjan, Randi D; Stewart, Frank J

2017-09-15

Understanding the associations among corals, their photosynthetic zooxanthella symbionts (Symbiodinium), and coral-associated prokaryotic microbiomes is critical for predicting the fidelity and strength of coral symbioses in the face of growing environmental threats. Most coral-microbiome associations are beneficial, yet the mechanisms that determine the composition of the coral microbiome remain largely unknown. Here, we characterized microbiome diversity in the temperate, facultatively symbiotic coral Astrangia poculata at four seasonal time points near the northernmost limit of the species range. The facultative nature of this system allowed us to test seasonal influence and symbiotic state (Symbiodinium density in the coral) on microbiome community composition. Change in season had a strong effect on A. poculata microbiome composition. The seasonal shift was greatest upon the winter to spring transition, during which time A. poculata microbiome composition became more similar among host individuals. Within each of the four seasons, microbiome composition differed significantly from that of surrounding seawater but was surprisingly uniform between symbiotic and aposymbiotic corals, even in summer, when differences in Symbiodinium density between brown and white colonies are the highest, indicating that the observed seasonal shifts are not likely due to fluctuations in Symbiodinium density. Our results suggest that symbiotic state may not be a primary driver of coral microbial community organization in A. poculata, which is a surprise given the long-held assumption that excess photosynthate is of importance to coral-associated microbes. Rather, other environmental or host factors, in this case, seasonal changes in host physiology associated with winter quiescence, may drive microbiome diversity. Additional studies of A. poculata and other facultatively symbiotic corals will provide important comparisons to studies of reef-building tropical corals and therefore help to identify basic principles of coral microbiome assembly, as well as functional relationships among holobiont members.

Effects of non-native earthworms on on below- and aboveground processes in the Mid-Atlantic region

NASA Astrophysics Data System (ADS)

Szlavecz, K. A.; McCormick, M. K.; Xia, L.; Pitz, S.; O'Neill, J.; Bernard, M.; Chang, C.; Whigham, D. F.

2011-12-01

Many biotic and abiotic disturbances have shaped the structure of the deciduous forests in the Mid-Atlantic region. One major anthropogenic factor is land use history. Agricultural practices in the past undoubtedly facilitated non-native earthworm colonization and establishment. Today most secondary forests are dominated by European lumbricid earthworms, although native species also occur in some habitats. To investigate how earthworm community composition and abundance affect belowground processes and tree seedling growth we set up a field manipulation experiment at the Smithsonian Environmental Research Center in Edgewater, MD. A total of 66 experimental plots were set up in successional (70 yrs) and mature (150 yrs) Tulip-poplar-Oak associations. We manipulated earthworm abundance and leaf litter input, and planted seedlings of Tulip poplar, Red maple, Red oak, and American beech. The experiment lasted for two years during which we regularly monitored density, biomass and species composition of earthworm assemblages and measured soil respiration. Soil moisture, temperature and air temperature were also continuously monitored using a wireless sensor network. At harvest, soil bulk density, pH, N pools, C:N ratio, potential N-mineralization rates, and enzyme activity were determined. We used quantitative PCR to assess the community composition of soil fungi. We also determined the extent of mycorrhizal colonization and biomass of roots, shoots and leaves. We conducted likelihood ratio tests for random and fixed effects based on mixed model analyses of variance. Differences between soil depths and among sites and plots accounted for a large portion of the variation in many soil properties. Litter quality affected soil pH and N mineralization. Earthworm densities affected bulk density, inorganic N content, and N mineralization. Both mycorrhizal groups were more abundant in mature than in successional forests. Both ectomycorrhizal (ECM) and arbuscular (AM) fungi were less abundant in the earthworm removal plots. There was a significant positive earthworm effect on the rate and thermal sensitivity of soil respiration. Soil respiration was consistently higher in plots with tulip poplar litter than those with beech litter, indicating a strong influence of plant residue quality. However, the differences were smaller in the second year than in the first one indicating an adaptation of the soil system. Oak and beech seedlings were smaller in high density earthworm plots, while the reverse was true for maple and tulip poplar seedlings. Non-native earthworms affect below- and aboveground processes, however, these effects depend on forest type and land use history. The earthworm effects also appear to be dynamic, as witnessed by a recent invasion of an Asian earthworm species in one of our forest stands.

Hydrological cycle effects on the aquatic community in a Neotropical stream of the Andean piedmont during the 2007-2010 ENSO events.

PubMed

Ríos-Pulgarín, M I; Barletta, M; Mancera-Rodriguez, N J

2016-07-01

The seasonal and interannual changes in the fish, macroinvertebrates and phycoperiphyton assemblages of the Guarinó River were examined in relation to the physical and chemical environmental changes associated with the hydrological cycle and the El Niño-Niña/Southern Oscillation (ENSO) between 2007 and 2010. Four samplings (in dry and rainy seasons) were performed per year. Environmental variables (temperature, pH, conductivity, turbidity, oxygen, total nitrogen, orthophosphate, depth and flow rate) were measured. The temporal patterns of the taxonomic compositions for the three assemblages and the functional composition of fish and macroinvertebrate assemblages with respect to environmental variables were examined through canonical discriminant analysis, multidimensional scaling and multiple correlations. The presence and abundance of fishes, macroinvertebrates and algae species were regulated by environmental variables associated with extreme hydrological events, which derived from the natural torrential regimen of the basin and larger-scale phenomena, such as El Niño and La Niña. Fish abundance and richness were significantly correlated with algal density and pH, the macroinvertebrate density was negatively related to the flow rate and the richness was positively correlated with algal density. The algae richness was positively correlated with pH and negatively correlated with the flow rate and nitrogen. The algal density was positively correlated with pH and temperature and negatively correlated with river flow. The phycoperiphyton assemblage exhibited more direct responses in its density and richness to the hydrological changes (r(2) = 0·743 and 0·800, respectively). In functional terms, the El Niño phenomenon was defined by a greater abundance of omnivorous and insectivorous fishes, as well as filter feeders, scrapers and macroinvertebrate predators. During La Niña, a greater abundance of benthic fishes (both detritivorous and insectivorous) and shredder and collector-gatherer macroinvertebrates was observed. Differentiated responses recorded in the community were based on adaptive strategies for the local hydrological regime that enable fast recovery under conditions such as ENSO phenomena. Composition changes according to adaptations to different hydrological scenarios and the predominance of generalists' trophic guilds and species with plasticity in their habits and their ranges of environmental tolerance were found, supporting the habitat templet model. © 2016 The Fisheries Society of the British Isles.

Seasonal variation in drifting eggs and larvae in the upper Yangtze, China.

PubMed

Jiang, Wei; Liu, Huan-Zhang; Duan, Zhong-Hua; Cao, Wen-Xuan

2010-05-01

From 5 March to 25 July 2008, ichthyoplankton drifting into the Three Gorges Reservoir from the upper reaches of the Yangtze River were sampled daily to investigate the species composition, abundance, and seasonal variation in early-stage fishes in this area. Twenty-eight species belonging to five orders and 17 families or subfamilies were identified by analyzing fish eggs and larvae, and a total of 14.16 billion individuals were estimated drifting through the sampling section during the investigation. Among the ichthyoplankton sampled, species in Cultrinae, Cobitidae, Gobioninae and Gobiidae, along with the common carp (Cyprinus carpio Linnaeus), comprised 89.6% of the total amount. Six peaks of drift density were identified during the sampling period, and a significant correlation was found between drift density with water discharge. The dominant species were different in each drift peak, indicating different spawning times for the major species. The total amount of the four major Chinese carps that drifted through the sampling section was estimated as 0.88 billion, indicating an increase in the population sizes of these species in the upper reaches of the Yangtze River after construction of the Three Gorges Dam. Actually, these reaches have become the largest spawning area for the four major Chinese carps in the Yangtze River. The large total amount of eggs and larvae drifting through this section demonstrated that the upper reaches of the Yangtze River provided important spawning sites for many fish species, and that conservation of this area should be of great concern.

Tree Regeneration Under Different Land-Use Mosaics in the Brazilian Amazon's "Arc of Deforestation".

PubMed

Do Vale, Igor; Miranda, Izildinha Souza; Mitja, Danielle; Grimaldi, Michel; Nelson, Bruce Walker; Desjardins, Thierry; Costa, Luiz Gonzaga Silva

2015-08-01

We studied the tree-regeneration patterns in three distinct agricultural settlements in the Eastern Amazon to test the influence of land-use mosaics. The following questions are addressed: are the floristic structure and composition of regenerating trees affected by the various land-use types applied in the agricultural settlements? Do tree-regeneration patterns respond similarly to distinct land-use mosaics? Is there a relationship between tree regeneration and soil characteristics among the land-use types? The regeneration was inventoried at 45 sampling points in each settlement. At each sampling point, fourteen soil variables were analyzed. Nine different land-use types were considered. The floristic structure and composition of the settlements showed differences in the density of individuals and species and high species heterogeneity among the land-use types. The maximum Jaccard similarity coefficient found between land-use types was only 29%. Shade-tolerant species were the most diverse functional group in most land-use types, including pasture and annual crops, ranging from 91% of the number of species in the conserved and exploited forests of Travessão 338-S to 53% in the invaded pastures of Maçaranduba. The land-use types influenced significantly the floristic structure and composition of regenerating trees in two agricultural settlements, but not in third the settlement, which had greater forest cover. This finding demonstrates that the composition of each land-use mosaic, established by different management approaches, affects regeneration patterns. Tree regeneration was related to soil characteristics in all mosaics. Preparation of the area by burning was most likely the determining factor in the differences in soil characteristics between forests and agricultural areas.

Preliminary results seen with Rosetta/ROSINA: early cometary activity of 67P/Churyumov-Gerasimenko

NASA Astrophysics Data System (ADS)

Gasc, Sebastien; Altwegg, Kathrin; Jäckel, Annette; Rubin, Martin; Tzou, Chia-Yu; Wurz, Peter; Fiethe, Björn; Korth, Axel; Rème, Henri

2014-11-01

On 1 August 2014, the ROSETTA spacecraft approached the comet 67P/Churyumov-Gerasimenko (67P/CG) close enough to start its detailed characterisation. In this phase, the distance between Rosetta and 67P/CG is below 1’000 km, at a heliocentric distance of less than 3.6 AU. The Rosetta Orbiter Spectrometer for Ion and Neutral Analysis (ROSINA) [1] measures the composition of 67P/CG’s atmosphere and ionosphere, and additionally derives the bulk velocity of gas. ROSINA consists of the COmetary Pressure Sensor (COPS) and two mass spectrometers for the analysis of neutral gas and cometary ions in the coma of the comet: the Double Focusing Mass Spectrometer (DFMS) and the Reflectron Time Of Flight mass spectrometer (RTOF). Since beginning of August, the ROSINA sensors are continuously monitoring the density and chemical composition of the coma of 67P/CG. The goal of this work is not only to determine the abundance of major species like CO2, CO, and H2O, but also to analyse the development of the composition as a function of the heliocentric distance. We will present the first mass spectra of RTOF as well as the total density and the molecular composition measurements obtained at 67P/CG.

Effects of emergency haying on vegetative characteristics within selected Conservation Reserve Program fields in the Northern Great Plains

USGS Publications Warehouse

Allen, A.W.; Cade, B.S.; Vandever, M.W.

2001-01-01

Successional changes in vegetation composition within seeded grasslands may effect attainment of long term conservaation objectives. Comparisons between vegetation composition within Conservation Reserve Program (CRP) fields planted to cool season, introduced grasses hayed for emergency we, and non hayed fields of the same age and species composition were completed to determine potential effects of periodic haying. Emergency haying had little long term effect on vegetation height/density, percent cover of live pass, or forb cover when compared to characteristics within non hayed fields?. The presence of legumes [primarily alfalfa (Medicago sativa L)] increased in response to haying, whereas, abundance of noxious weeds [chiefly Canada thistle (Cirsium arvense (L) Scop.)] diminished. Implications for long term management CRP grassland to achieve wildlife habitat objectives are discussed.

Temporal variability in lipid dynamics of three coexisting dominant krill species in the St. Lawrence Estuary

NASA Astrophysics Data System (ADS)

Cabrol, J.; Aulanier, F.; Tremblay, R.; Starr, M.; Plourde, S.; Rainville, L.; Winkler, G.

2016-02-01

The St. Lawrence Estuary (Canada) is a subarctic ecosystem characterised by a strong stratification with a cold intermediate layer providing different thermal habitats occupied by different krill species (Meganyctiphanes norvegica, Thysanoessa raschii, Thysanoessa inermis), ranging from temperate to arctic. Krill is an important consumer of phyto/zooplankton allowing energy transfer (mostly lipids) towards upper trophic levels. However, lipid dynamics and trophic interactions between these krill species are poorly understood in the St. Lawrence Estuary. Here, we describe the seasonal variability in their lipids classes and fatty acids composition in relation to biotic and abiotic factors. Lipid content of the temperate species M. norvegica showed high levels of triacylglycerol (TAG) comparatively to the arctic species T. inermis. In this latter species,the wax ester (WE) predominated, as in many other arctic species. In contrast to many other regions of its geographical distribution, we detected a significant quantity of WE in M. norvegica that could represent an adaptation of this species to subarctic environments in order to survive during the wintertime. M. norvegica had however less lipid content per individual than T. raschii and T, inermis, whereas M. norvegica is the bigger species. In addition, lipids content of M. norvegica was related to copepod density in the St. Lawrence Estuary suggesting dominance of "carnivorous feeding". This feeding dominance was confirmed by fatty acids composition of tissues. In opposite, Thysanoessa sp. seems to be more generalist (omnivorous) although with a preference for phytoplankton. Our results are discussed in the context of climate change predicted.

High-density volatiles in the system C-O-H-N for the calibration of a laser Raman microprobe

USGS Publications Warehouse

Chou, I.-Ming; Pasteris, J.D.; Seitz, J.C.

1990-01-01

Three methods have been used to produce high-density volatiles in the system C-O-H-N for the calibration of a laser Raman microprobe (LRM): synthetic fluid-inclusion, sealed fused-quartz-tube, and high-pressure-cell methods. Because quantitative interpretation of a Raman spectrum of mixed-volatile fluid inclusions requires accurate knowledge of pressure- and composition-sensitive Raman scattering efficiencies or quantification factors for each species, calibrations of these parameters for mixtures of volatiles of known composition and pressure are necessary. Two advantages of the synthetic fluid-inclusion method are that the inclusions can be used readily in complementary microthermometry (MT) studies and that they have sizes and optical properties like those in natural samples. Some disadvantages are that producing H2O-free volatile mixtures is difficult, the composition may vary from one inclusion to another, the exact composition and density of the inclusions are difficult to obtain, and the experimental procedures are complicated. The primary advantage of the method using sealed fused-quartz tubes is its simplicity. Some disadvantages are that exact compositions for complex volatile mixtures are difficult to predict, densities can be approximated only, and complementary MT studies on the tubes are difficult to conduct. The advantages of the high-pressure-cell method are that specific, known compositions of volatile mixtures can be produced and that their pressures can be varied easily and are monitored during calibration. Some disadvantages are that complementary MT analysis is impossible, and the setup is bulky. Among the three methods for the calibration of an LRM, the high-pressure-cell method is the most reliable and convenient for control of composition and total pressure. We have used the high-pressure cell to obtain preliminary data on 1. (1) the ratio of the Raman quantification factors for CH4 and N2 in an equimolar CH4N2 mixture and 2. (2) the spectral peak position of ??1 of CH4 in that mixture, as well as in pure CH4, at pressures up to 690 bars. These data were successfully applied to natural inclusions from the Duluth Complex in order to derive their compositions and total pressures. ?? 1990.

The effect of habitual and experimental antiperspirant and deodorant product use on the armpit microbiome.

PubMed

Urban, Julie; Fergus, Daniel J; Savage, Amy M; Ehlers, Megan; Menninger, Holly L; Dunn, Robert R; Horvath, Julie E

2016-01-01

An ever expanding body of research investigates the human microbiome in general and the skin microbiome in particular. Microbiomes vary greatly from individual to individual. Understanding the factors that account for this variation, however, has proven challenging, with many studies able to account statistically for just a small proportion of the inter-individual variation in the abundance, species richness or composition of bacteria. The human armpit has long been noted to host a high biomass bacterial community, and recent studies have highlighted substantial inter-individual variation in armpit bacteria, even relative to variation among individuals for other body habitats. One obvious potential explanation for this variation has to do with the use of personal hygiene products, particularly deodorants and antiperspirants. Here we experimentally manipulate product use to examine the abundance, species richness, and composition of bacterial communities that recolonize the armpits of people with different product use habits. In doing so, we find that when deodorant and antiperspirant use were stopped, culturable bacterial density increased and approached that found on individuals who regularly do not use any product. In addition, when antiperspirants were subsequently applied, bacterial density dramatically declined. These culture-based results are in line with sequence-based comparisons of the effects of long-term product use on bacterial species richness and composition. Sequence-based analyses suggested that individuals who habitually use antiperspirant tended to have a greater richness of bacterial OTUs in their armpits than those who use deodorant. In addition, individuals who used antiperspirants or deodorants long-term, but who stopped using product for two or more days as part of this study, had armpit communities dominated by Staphylococcaceae, whereas those of individuals in our study who habitually used no products were dominated by Corynebacterium. Collectively these results suggest a strong effect of product use on the bacterial composition of armpits. Although stopping the use of deodorant and antiperspirant similarly favors presence of Staphylococcaceae over Corynebacterium, their differential modes of action exert strikingly different effects on the richness of other bacteria living in armpit communities.

The effect of habitual and experimental antiperspirant and deodorant product use on the armpit microbiome

PubMed Central

Urban, Julie; Fergus, Daniel J.; Savage, Amy M.; Ehlers, Megan; Menninger, Holly L.; Dunn, Robert R.

2016-01-01

An ever expanding body of research investigates the human microbiome in general and the skin microbiome in particular. Microbiomes vary greatly from individual to individual. Understanding the factors that account for this variation, however, has proven challenging, with many studies able to account statistically for just a small proportion of the inter-individual variation in the abundance, species richness or composition of bacteria. The human armpit has long been noted to host a high biomass bacterial community, and recent studies have highlighted substantial inter-individual variation in armpit bacteria, even relative to variation among individuals for other body habitats. One obvious potential explanation for this variation has to do with the use of personal hygiene products, particularly deodorants and antiperspirants. Here we experimentally manipulate product use to examine the abundance, species richness, and composition of bacterial communities that recolonize the armpits of people with different product use habits. In doing so, we find that when deodorant and antiperspirant use were stopped, culturable bacterial density increased and approached that found on individuals who regularly do not use any product. In addition, when antiperspirants were subsequently applied, bacterial density dramatically declined. These culture-based results are in line with sequence-based comparisons of the effects of long-term product use on bacterial species richness and composition. Sequence-based analyses suggested that individuals who habitually use antiperspirant tended to have a greater richness of bacterial OTUs in their armpits than those who use deodorant. In addition, individuals who used antiperspirants or deodorants long-term, but who stopped using product for two or more days as part of this study, had armpit communities dominated by Staphylococcaceae, whereas those of individuals in our study who habitually used no products were dominated by Corynebacterium. Collectively these results suggest a strong effect of product use on the bacterial composition of armpits. Although stopping the use of deodorant and antiperspirant similarly favors presence of Staphylococcaceae over Corynebacterium, their differential modes of action exert strikingly different effects on the richness of other bacteria living in armpit communities. PMID:26855863

Chronic human disturbance affects plant trait distribution in a seasonally dry tropical forest

NASA Astrophysics Data System (ADS)

Sfair, Julia C.; de Bello, Francesco; de França, Thaysa Q.; Baldauf, Cristina; Tabarelli, Marcelo

2018-02-01

The effects of human disturbance on biodiversity can be mediated by environmental conditions, such as water availability, climate and nutrients. In general, disturbed, dry or nutrient-depleted soils areas tend to have lower taxonomic diversity. However, little is known about how these environmental conditions affect functional composition and intraspecific variability in tropical dry forests. We studied a seasonally dry tropical forest (SDTF) under chronic anthropogenic disturbance (CAD) along rainfall and soil nutrient gradients to understand how these factors influence the taxonomic and functional composition. Specifically we evaluated two aspects of CAD, wood extraction and livestock pressure (goat and cattle grazing), along soil fertility and rainfall gradients on shrub and tree traits, considering species turnover and intraspecific variability. In addition, we also tested how the traits of eight populations of the most frequent species are affected by wood extraction, livestock pressure, rainfall and soil fertility. In general, although CAD and environmental gradients affected each trait of the most widespread species differently, the most abundant species also had a greater variation of traits. Considering species turnover, wood extraction is associated with species with a smaller leaf area and lower investment in leaf mass, probably due to the indirect effects of this disturbance type on the vegetation, i.e. the removal of branches and woody debris clears the vegetation, favouring species that minimize water loss. Livestock pressure, on the other hand, affected intraspecific variation: the herbivory caused by goats and cattle promoted individuals which invest more in wood density and leaf mass. In this case, the change of functional composition observed is a direct effect of the disturbance, such as the decrease of palatable plant abundance by goat and cattle herbivory. In synthesis, CAD, rainfall and soil fertility can affect trait distribution at community and species levels, which can have significant implications for the ecosystem functioning of SDTF under increasing levels of disturbance, climate change and soil nutrient depletion.

Consequences of extreme life history traits on population persistence: do short-lived gobies face demographic bottlenecks?

NASA Astrophysics Data System (ADS)

Lefèvre, Carine D.; Nash, Kirsty L.; González-Cabello, Alonso; Bellwood, David R.

2016-06-01

The majority of coral reef goby species are short-lived, with some highly abundant species living less than 100 d. To understand the role and consequences of this extreme life history in shaping coral reef fish populations, we quantitatively documented the structure of small reef fish populations over a 26-month period (>14 short-lived fish generations) at an inshore reef on the Great Barrier Reef, Australia. Most species with life spans >1 yr, such as pomacentrids, exhibited a peak in recruitment during the austral summer, driving seasonal changes in the small fish community composition. In contrast, there were no clear changes in goby community composition, despite the abundance of short-lived, high turnover species. Species of Eviota, the most abundant gobiid genus observed, showed remarkably similar demographic profiles year-round, with consistent densities of adults as well as recently recruited juveniles. Our results demonstrate ongoing recruitment of these small cryptic fishes, which appears to compensate for an exceptionally short life span on the reef. Our results suggest that gobiid populations are able to overcome demographic limitations, and by maintaining reproduction, larval survival and recruitment throughout the year, they may avoid population bottlenecks. These findings also underline the potential trophodynamic importance of these small species; because of this constant turnover, Eviota species and other short-lived fishes may be particularly valuable contributors to the flow of energy on coral reefs, underpinning the year-round trophic structure.

More than just drought: complexity of recruitment patterns in Mediterranean forests.

PubMed

Granda, Elena; Escudero, Adrián; Valladares, Fernando

2014-12-01

Understanding community dynamics during early life stages of trees is critical for the prediction of future species composition. In Mediterranean forests drought is a major constraint for regeneration, but likely not the only factor determining the observed spatial patterns. We carried out a sowing experiment aimed at identifying main filters during seed-seedling transition. Specifically, we studied seed fate (predation, fungi infection, emergence) and subsequent seedling performance (mortality during the first summer and overall recruitment after 2 years) of four co-occurring Mediterranean tree species (Quercus ilex, Quercus faginea, Juniperus thurifera, Pinus nigra). We related these processes to the dominant species composition, microhabitat heterogeneity, herb cover and seed mass. The identity of the dominant species in the forest canopy was more important for recruitment than the forest canopy being dominated by conspecific vs. heterospecific species. The patterns we found suggest that biotic interactions such as facilitation (lower mortality under the canopies) and herb competition (during emergence of J. thurifera) are relevant during recruitment. Moreover, our results pointed to ontogenetic conflicts regarding the seed mass of Q. faginea and to density-dependent seed mortality for Q. ilex, rarely described in Mediterranean ecosystems. We propose that our study species experience population growth in forests dominated by heterospecifics where the recruitment success depends on habitat heterogeneity and on moderated biotic and abiotic stresses created by each species. Our results reveal patterns and mechanisms involved in recruitment constraints that add complexity to the well-known drought-related processes in Mediterranean ecosystems.

Simultaneous Observations of Atmospheric Tides from Combined in Situ and Remote Observations at Mars from the MAVEN Spacecraft

NASA Technical Reports Server (NTRS)

England, Scott L.; Liu, Guiping; Withers, Paul; Yigit, Erdal; Lo, Daniel; Jain, Sonal; Schneider, Nicholas M. (Inventor); Deighan, Justin; McClintock, William E.; Mahaffy, Paul R.;

Off shore wind farms change the benthic pelagic coupling in the Belgian Part of the North Sea

NASA Astrophysics Data System (ADS)

Vanaverbeke, Jan; Coates, Delphine; Braeckman, Ulrike; Soetaert, Karline; Moens, Tom

2016-04-01

Since Europe enforced renewable energy target figures upon its member states through the implementation of two main European Directives 11 2001/77/EC and 2009/28/EC, the development of offshore wind farms (OWF) has accelerated. Belgium installed OWFs on sandbanks, characterized by permeable sediments, low in organic matter content and a species-poor macrofaunal community with species occurring in low densities. A detailed monitoring campaign in the immediate vicinity of a wind turbine (1-200m), revealed a significant decrease in median grain size and permeability, coinciding with a 6-fold increase in organic matter content. The observed fining of the sediment is explained by an altered benthic-pelagic coupling in the area. The wind turbines are colonized by an abundant fouling community producing high amounts of detritus and faeces, a continuous additional source of organic matter. The changes in sediment composition, and the availability of additional organic matter resulted in drastic increase in macrofaunal densities (from 1390 ind m-2 to 18600 ind m-2), and a change from a species-poor community to a species-rich community dominated by the ecosystem engineer Lanice conchilega. Large densities of L. conchilega, as observed in our samples, are known to trap fine material from the water column, which can result in a further decrease of sediment permeability in the vicinity of the wind turbines. A preliminary experiment, where permeable sediments were subjected to artificial fining, showed a decreased penetration depth of advective water currents and a reduced trapping of diatoms by the sediment in finer sediments. Additionally, sediment community oxygen consumption rates, and efflux of NH4+ from the sediment, measured after a simulated phytoplankton bloom, decreased significantly when sediment permeability was reduced. We hypothesize that the combination of the altered macrofaunal community composition, together with the changes in the physical properties of the sediment matrix, will lead to a change in the biogeochemical properties of the sediment: highly reactive permeable sediments, poor in organic matter will shift towards sediment where organic matter will accumulate. Degradation of organic matter will then no longer be governed by physical processes, but mediated by biological processes (bioturbation, bio-irrigation).

Flea and Small Mammal Species Composition in Mixed-Grass Prairies: Implications for the Maintenance of Yersinia pestis.

PubMed

Maestas, Lauren P; Britten, Hugh B

2017-07-01

Maintenance of sylvatic plague in prairie dogs (Cynomis spp.) was once thought unlikely due to high mortality rates; yet more recent findings indicate that low-level enzootic plague may be maintained in susceptible prairie dog populations. Another hypothesis for the maintenance of sylvatic plague involves small mammals, other than prairie dogs, as an alternative reservoir in the sylvatic plague system. These hypotheses, however, are not mutually exclusive, as both prairie dogs and small mammals could together be driving sylvatic cycles of plague. The concept of a bridging vector has been used to explain the transmission of pathogens from one host species to another. In the case of sylvatic plague, this would require overlap in fleas between small mammals and prairie dogs, and potentially other species such as carnivores. Our goal was to evaluate the level of flea sharing between black-tailed prairie dogs (Cynomis ludovicianus) and other small mammals in a mixed-grass prairie in South Dakota. We investigated the species richness of small mammals and small-mammal fleas in a mixed-grass prairie system and compared findings with previous studies from a short-grass ecosystem in Colorado. Over the summer field seasons 2014-2016 we live-trapped small mammals, collected fleas, and showed differences between both the flea and small mammal composition of the two systems. We also recorded higher densities of deer mice and lower densities of northern grasshopper mice in mixed versus shortgrass prairies. We confirmed, as is the case in shortgrass prairies, a lack of substantial flea species overlap on small mammal hosts and fleas from prairie dogs and their burrows. Moreover this study demonstrates that although small mammals may not play a large part in interepizootic plague cycling in shortgrass prairie ecosystems, their role in mixed-grass prairies requires further evaluation.

Floral and nesting resources, habitat structure, and fire influence bee distribution across an open-forest gradient

USGS Publications Warehouse

Grundel, R.; Jean, R.P.; Frohnapple, K.J.; Glowacki, G.A.; Scott, P.E.; Pavlovic, N.B.

2010-01-01

Given bees' central effect on vegetation communities, it is important to understand how and why bee distributions vary across ecological gradients. We examined how plant community composition, plant diversity, nesting suitability, canopy cover, land use, and fire history affected bee distribution across an open-forest gradient in northwest Indiana, USA, a gradient similar to the historic Midwest United States landscape mosaic. When considered with the other predictors, plant community composition was not a significant predictor of bee community composition. Bee abundance was negatively related to canopy cover and positively to recent fire frequency, bee richness was positively related to plant richness and abundance of potential nesting resources, and bee community composition was significantly related to plant richness, soil characteristics potentially related to nesting suitability, and canopy cover. Thus, bee abundance was predicted by a different set of environmental characteristics than was bee species richness, and bee community composition was predicted, in large part, by a combination of the significant predictors of bee abundance and richness. Differences in bee community composition along the woody vegetation gradient were correlated with relative abundance of oligolectic, or diet specialist, bees. Because oligoleges were rarer than diet generalists and were associated with open habitats, their populations may be especially affected by degradation of open habitats. More habitat-specialist bees were documented for open and forest/scrub habitats than for savanna/woodland habitats, consistent with bees responding to habitats of intermediate woody vegetation density, such as savannas, as ecotones rather than as distinct habitat types. Similarity of bee community composition, similarity of bee abundance, and similarity of bee richness between sites were not significantly related to proximity of sites to each other. Nestedness analysis indicated that species composition in species-poor sites was not merely a subset of species composition at richer sites. The lack of significant proximity or nestedness effects suggests that factors at a small spatial scale strongly influence bees' use of sites. The findings indicate that patterns of plant diversity, nesting resource availability, recent fire, and habitat shading, present at the scale of a few hundred meters, are key determinants of bee community patterns in the mosaic open-savanna-forest landscape. ?? 2010 by the Ecological Society of America.

Occupancy patterns of regionally declining grassland sparrow populations in a forested Pennsylvania landscape

USGS Publications Warehouse

Hill, Jason M.; Diefenbach, Duane R.

2014-01-01

Organisms can be affected by processes in the surrounding landscape outside the boundary of habitat areas and by local vegetation characteristics. There is substantial interest in understanding how these processes affect populations of grassland birds, which have experienced substantial population declines. Much of our knowledge regarding patterns of occupancy and density stem from prairie systems, whereas relatively little is known regarding how occurrence and abundance of grassland birds vary in reclaimed surface mine grasslands. Using distance sampling and single-season occupancy models, we investigated how the occupancy probability of Grasshopper (Ammodramus savannarum) and Henslow's Sparrows (A. henslowii) on 61 surface mine grasslands (1591 ha) in Pennsylvania changed from 2002 through 2011 in response to landscape, grassland, and local vegetation characteristics . A subset (n = 23; 784 ha) of those grasslands were surveyed in 2002, and we estimated changes in sparrow density and vegetation across 10 years. Grasshopper and Henslow's Sparrow populations declined 72% and 49%, respectively from 2002 to 2011, whereas overall woody vegetation density increased 2.6 fold. Henslow's Sparrows avoided grasslands with perimeter–area ratios ≥0.141 km/ha and woody shrub densities ≥0.04 shrubs/m2. Both species occupied grasslands ≤13 ha, but occupancy probability declined with increasing grassland perimeter–area ratio and woody shrub density. Grassland size, proximity to nearest neighboring grassland ( = 0.2 km), and surrounding landscape composition at 0.5, 1.5, and 3.0 km were not parsimonious predictors of occupancy probability for either species. Our results suggest that reclaimed surface mine grasslands, without management intervention, are ephemeral habitats for Grasshopper and Henslow's Sparrows. Given the forecasted decline in surface coal production for Pennsylvania, it is likely that both species will continue to decline in our study region for the foreseeable future.

Insecticide-degrading Burkholderia symbionts of the stinkbug naturally occupy various environments of sugarcane fields in a Southeast island of Japan.

PubMed

Tago, Kanako; Okubo, Takashi; Itoh, Hideomi; Kikuchi, Yoshitomo; Hori, Tomoyuki; Sato, Yuya; Nagayama, Atsushi; Hayashi, Kentaro; Ikeda, Seishi; Hayatsu, Masahito

2015-01-01

The stinkbug Cavelerius saccharivorus, which harbors Burkholderia species capable of degrading the organophosphorus insecticide, fenitrothion, has been identified on a Japanese island in farmers' sugarcane fields that have been exposed to fenitrothion. A clearer understanding of the ecology of the symbiotic fenitrothion degraders of Burkholderia species in a free-living environment is vital for advancing our knowledge on the establishment of degrader-stinkbug symbiosis. In the present study, we analyzed the composition and abundance of degraders in sugarcane fields on the island. Degraders were recovered from field samples without an enrichment culture procedure. Degrader densities in the furrow soil in fields varied due to differences in insecticide treatment histories. Over 99% of the 659 isolated degraders belonged to the genus Burkholderia. The strains related to the stinkbug symbiotic group predominated among the degraders, indicating a selection for this group in response to fenitrothion. Degraders were also isolated from sugarcane stems, leaves, and rhizosphere in fields that were continuously exposed to fenitrothion. Their density was lower in the plant sections than in the rhizosphere. A phylogenetic analysis of 16S rRNA gene sequences demonstrated that most of the degraders from the plants and rhizosphere clustered with the stinkbug symbiotic group, and some were identical to the midgut symbionts of C. saccharivorus collected from the same field. Our results confirmed that plants and the rhizosphere constituted environmental reservoirs for stinkbug symbiotic degraders. To the best of our knowledge, this is the first study to investigate the composition and abundance of the symbiotic fenitrothion degraders of Burkholderia species in farmers' fields.

Grassland bird productivity in warm season grass fields in southwest Wisconsin

USGS Publications Warehouse

Byers, Carolyn M.; Ribic, Christine; Sample, David W.; Dadisman, John D.; Guttery, Michael

2017-01-01

Surrogate grasslands established through federal set-aside programs, such as U.S. Department of Agriculture's Conservation Reserve Program (CRP), provide important habitat for grassland birds. Warm season grass CRP fields as a group have the potential for providing a continuum of habitat structure for breeding birds, depending on how the fields are managed and their floristic composition. We studied the nesting activity of four obligate grassland bird species, Bobolink (Dolichonyx oryzivorus), Eastern Meadowlark (Sturnella magna), Grasshopper Sparrow (Ammodramus savannarum), and Henslow's Sparrow (A. henslowii), in relation to vegetative composition and fire management in warm season CRP fields in southwest Wisconsin during 2009–2011. Intraspecific variation in apparent nest density was related to the number of years since the field was burned. Apparent Grasshopper Sparrow nest density was highest in the breeding season immediately following spring burns, apparent Henslow's Sparrow nest density was highest 1 y post burn, and apparent Bobolink and Eastern Meadowlark nest densities were higher in post fire years one to three. Grasshopper Sparrow nest density was highest on sites with more diverse vegetation, specifically prairie forbs, and on sites with shorter less dense vegetation. Bobolink, Eastern Meadowlark, and Henslow's Sparrow apparent nest densities were higher on sites with deeper litter; litter was the vegetative component that was most affected by spring burns. Overall nest success was 0.487 for Bobolink (22 d nesting period), 0.478 for Eastern Meadowlark (25 d nesting period), 0.507 for Grasshopper Sparrow (22 d nesting period), and 0.151 for Henslow's Sparrow (21 d nesting period). The major nest predators were grassland-associated species: thirteen-lined ground squirrel (Ictidomys tridecemlineatus), striped skunk (Mephitis mephitis), milk snake (Lampropeltis triangulum), American badger (Taxidea taxus), and western fox snake (Elaphe vulpina). Overall depredation rate was not affected by the number of years since the site had been burned. The diversity of vegetation on warm season CRP fields created by management using fire provides a continuum of structure for obligate grassland birds to use for breeding and habitat for a diversity of nest predators.

Community variability and ecological functioning: 40 years of change in the North Sea benthos.

PubMed

Clare, D S; Robinson, L A; Frid, C L J

2015-06-01

Using established associations between species traits (life history, morphological and behavioural characteristics) and key ecological functions, we applied biological traits analysis (BTA) to investigate the consequences of 40 years of change in two North Sea benthic communities. Ecological functioning (trait composition) was found to be statistically indistinguishable across periods that differed significantly in taxonomic composition. A temporary alteration to functioning was, however, inferred at both sampling stations; coinciding with the North Sea regime shift of the 1980s. Trait composition recovered after 1 year at the station located inside the grounds of a trawl fishery, whereas the station located outside the main area of fishing activity underwent a six-year period of significantly altered, and temporally unstable, trait composition. A further alteration to functioning was inferred at the fished station, when the population of a newly established species rapidly increased in numbers. The results suggest that density compensation by characteristically similar (redundant) taxa acts to buffer changes to ecological functioning over time, but that functional stability is subject to aperiodic disruption due to substitutions of dissimilar taxa or uncompensated population fluctuations. The rate at which ecological functioning stabilises and recovers appears to be dependent on environmental context; e.g. disturbance regime. Copyright © 2015 Elsevier Ltd. All rights reserved.

[Population change of farmland rodent and the influences of climate and cultivation factors in Fengxian District of Shanghai, China].

PubMed

Fei, Lei; Wang, Zu-guo; Yao, Yao; Xu, Xiang-ming; Gu, Pin-qiang

2015-02-01

We analyzed the changes of rodent population from 1988 to 2013 in Fengxian District, Shanghai, and discussed the relevance of rodent population dynamics and climate, and ecological factors. Results showed that the average rat density was 1.3% from 1988 to 2013, and the dominant species was Apodemus agrarius. There was little change of density between years. The average composition ratio was 97.5%. The peak of rodent density appeared from February to May, highest in March. Average density and peak decreased obviously year after year. Numbers of adult rodents of 1st group were positively correlated, while that of adult rodents of 2nd group and elderly group negatively correlated with years. Rat age presented a shortened trend annually. Rodent density and temperature factors were negatively correlated except in January. Extreme warmth in February had a lagged, positive effect on the rat density. Precipitation factors had no significant correlation with the density of rodents. Relative humidity was positively correlated with the density, mostly. Planting structure adjustment and reduction of planting acreage were significantly correlated with the reduction of rodent density. Increased deratization rate was also correlated with the reduction.

The influence of linear elements on plant species diversity of Mediterranean rural landscapes: assessment of different indices and statistical approaches.

PubMed

García del Barrio, J M; Ortega, M; Vázquez De la Cueva, A; Elena-Rosselló, R

2006-08-01

This paper mainly aims to study the linear element influence on the estimation of vascular plant species diversity in five Mediterranean landscapes modeled as land cover patch mosaics. These landscapes have several core habitats and a different set of linear elements--habitat edges or ecotones, roads or railways, rivers, streams and hedgerows on farm land--whose plant composition were examined. Secondly, it aims to check plant diversity estimation in Mediterranean landscapes using parametric and non-parametric procedures, with two indices: Species richness and Shannon index. Land cover types and landscape linear elements were identified from aerial photographs. Their spatial information was processed using GIS techniques. Field plots were selected using a stratified sampling design according to relieve and tree density of each habitat type. A 50x20 m2 multi-scale sampling plot was designed for the core habitats and across the main landscape linear elements. Richness and diversity of plant species were estimated by comparing the observed field data to ICE (Incidence-based Coverage Estimator) and ACE (Abundance-based Coverage Estimator) non-parametric estimators. The species density, percentage of unique species, and alpha diversity per plot were significantly higher (p < 0.05) in linear elements than in core habitats. ICE estimate of number of species was 32% higher than of ACE estimate, which did not differ significantly from the observed values. Accumulated species richness in core habitats together with linear elements, were significantly higher than those recorded only in the core habitats in all the landscapes. Conversely, Shannon diversity index did not show significant differences.

Thresholds of motion of shell debris under unidirectional flow: influence of faunal composition

NASA Astrophysics Data System (ADS)

Rieux, A.; Weill, P.; Mouazé, D.; Poirier, C.; Tessier, B.

2017-12-01

Quantifying bottom sediment erodibility is necessary to refine understanding of coastal processes and fossil records. Coastal sediments are partly composed of biogenic particles, which shape and density differ from rounded quartz grain and vary between species. Numerous studies have investigated the hydrodynamic behaviour of bioclastic sediments derived from reef-dwelling organisms, but research focusing on "cool-water carbonate" bioclastic particles (i.e. mollusc shell debris, calcareous algae, …) are rare. The present study aims in characterizing the influence of faunal composition on the entrainment threshold of mollusc shell debris from temperate regions. Shells have been sampled on shelly ridges in the southern coast of the Mont-Saint-Michel bay (NW France), before being ground and separated into individual sieve fractions. Eight species, representative of the local faunal composition, have been studied: four wild (cockle, furrow shell, saddle oyster, flat oyster), three reared (japanese oyster, mussel, manila clam) and one introduced (slipper limpet) species. Experiments for defining the threshold of motion of all samples were conducted in a small recirculating flume, under unidirectional current, and using an Acoustic Doppler Velocimeter Profiler. Critical bed shear stress values (τcr) were derived from velocity profiles in the boundary layer, by a logarithmic regression of the "law of the wall". Depending on the species, the evolution of τcr with increasing grain diameters follows either an asymptotic or a more linear trend. Differences between species can be discerned: saddle oyster, japanese oyster and flat oyster show the smallest τcr, slipper limpet, furrow shell and mussel have an intermediate τcr and cockle and manila clam the highest τcr. For the 2-3.15 mm fraction, τcr ranges from 0.38 N.m-2 (saddle oyster) to 2.13 N.m-2 (cockle). Oyster shells (japanese and flat oysters) are composed of foliated sheets of calcite, interbedded with soft, porous and chalky material. These two components present different thresholds of motion (e.g. for 2-3.15 mm sieve fraction: 0.54 N.m-2 for the chalky material to 1.08 N.m-2 for the foliated calcite sheets). Variations in hydrodynamic behaviour are attributed to a combination of differences in shell density, shell structure and grain shape.

Structure and stability of hexa-aqua V(III) cations in vanadium redox flow battery electrolytes.

PubMed

Vijayakumar, M; Li, Liyu; Nie, Zimin; Yang, Zhenguo; Hu, JianZhi

2012-08-07

The vanadium(III) cation structure in mixed acid based electrolyte solution from vanadium redox flow batteries is studied by (17)O and (35/37)Cl nuclear magnetic resonance (NMR) spectroscopy, electronic spectroscopy and density functional theory (DFT) based computational modelling. Both computational and experimental results reveal that the V(III) species can complex with counter anions (sulfate/chlorine) depending on the composition of its solvation sphere. By analyzing the powder precipitate it was found that the formation of sulfate complexed V(III) species is the crucial process in the precipitation reaction. The precipitation occurs through nucleation of neutral species formed through deprotonation and ion-pair formation process. However, the powder precipitate shows a multiphase nature which warrants multiple reaction pathways for precipitation reaction.

Changes in tree functional composition amplify the response of forest biomass to climate variability

NASA Astrophysics Data System (ADS)

Lichstein, Jeremy; Zhang, Tao; Niinemets, Ulo; Sheffield, Justin

2017-04-01

The response of forest carbon storage to climate change is highly uncertain, contributing substantially to the divergence among global climate model projections. Numerous studies have documented responses of forest ecosystems to climate change and variability, including drought-induced increases in tree mortality rates. However, the sensitivity of forests to climate variability - in terms of both biomass carbon storage and functional components of tree species composition - has yet to be quantified across a large region using systematically sampled data. Here, we combine systematic forest inventories across the eastern USA with a species-level drought-tolerance index, derived from a meta-analysis of published literature, to quantify changes in forest biomass and community-mean-drought-tolerance in one-degree grid cells from the 1980s to 2000s. We show that forest biomass responds to decadal-scale changes in water deficit and that this biomass response is amplified by concurrent changes in community-mean-drought-tolerance. The amplification of the direct effects of water stress on biomass occurs because water stress tends to induce a shift in tree species composition towards more drought-tolerant but lower-biomass species. Multiple plant functional traits are correlated with the above species-level drought-tolerance index, and likely contribute to the decrease in biomass with increasing drought-tolerance. These traits include wood density and P50 (the xylem water potential at which a plant loses 50% of its hydraulic conductivity). Simulations with a trait- and competition-based dynamic global vegetation model suggest that species differences in plant carbon allocation to wood, leaves, and fine roots also likely contribute to the observed decrease in biomass with increasing drought-tolerance, because competition drives plants to over-invest in fine roots when water is limiting. Thus, the most competitive species under dry conditions have greater root allocation but lower total biomass than productivity-maximizing plants. Amplification of the biomass-climate response due to shifts in species functional composition (temporal beta diversity) contrasts with evidence that local (alpha) diversity increases ecosystem stability, including increased resistance to climate extremes. These contrasting effects of alpha and beta diversity highlight the need to better understand how different components of biodiversity, including changes in the functional traits of the dominant plant species, affect ecosystem functioning.

Lake Ontario zooplankton in 2003 and 2008: Community changes and vertical redistribution

USGS Publications Warehouse

Rudstam, Lars G.; Holeck, Kristen T.; Bowen, Kelly L.; Watkins, James M.; Weidel, Brian C.; Luckey, Frederick J.

2014-01-01

Lake-wide zooplankton surveys are critical for documenting and understanding food web responses to ecosystem change. Surveys in 2003 and 2008 during the binational intensive field year in Lake Ontario found that offshore epilimnetic crustacean zooplankton declined by a factor of 12 (density) and factor of 5 (biomass) in the summer with smaller declines in the fall. These declines coincided with an increase in abundance of Bythotrephes and are likely the result of direct predation by, or behavioral responses to this invasive invertebrate predator. Whole water column zooplankton density also declined from 2003 to 2008 in the summer and fall (factor of 4), but biomass only declined in the fall (factor of 2). The decline in biomass was less than the decline in density because the average size of individual zooplankton increased. This was due to changes in the zooplankton community composition from a cyclopoid/bosminid dominated community in 2003 to a calanoid dominated community in 2008. The increase in calanoid copepods was primarily due to the larger species Limnocalanus macrurus and Leptodiaptomus sicilis. These cold water species were found in and below the thermocline associated with a deep chlorophyll layer. In 2008, most of the zooplankton biomass resided in or below the thermocline during the day. Increased importance of copepods in deeper, colder water may favor Cisco and Rainbow Smelt over Alewife because these species are better adapted to cold temperatures than Alewife.

Wave Velocity Attenuation and Sediment Retention among Different Vegetation Types in a Pacific Northwest Estuary

NASA Astrophysics Data System (ADS)

Lemein, T.; Cox, D. T.; Albert, D.; Blackmar, P.

2012-12-01

Feedbacks between vegetation, wave climate, and sedimentation create stable ecosystem states within estuaries that provide ecosystem services such as wildlife habitat, erosion control, and pollution filtration. Flume and field studies conducted with cordgrass (Spartina spp.) and sea grasses (Zostera spp., Halodule spp.) have demonstrated that the presence of vegetation reduces wave energy and increases sediment retention. Since the spatial distribution of plant species and the presence of unique plant species differ between estuaries, there is a need to understand how individual plant species, or groups of species with similar morphology, influence wave characteristics and sedimentation. Within Tillamook Bay, Oregon, three species of emergent vascular vegetation species (Carex lyngbyei, Eleocharis sp., Schoenoplectus pungens) and one species of submergent vascular vegetation species (Zostera marina) are present in the high wave energy portion of the estuary at the border of open water and the start of vegetation. These species represent three distinct growth forms (emergent reeds, emergent grasses, submergent grasses) and occur at varying densities relative to each other, as well as within the estuary. Using paired acoustic Doppler velocimeters (ADVs), we quantify the relative attenuation of wave velocity between vegetation types and densities within the estuary and compare these results with published attenuation rates from flume and field studies in different environments. The effect of decreased wave velocity on sediment retention is measured using permanent sediment markers within and outside of vegetation stands and paired with ADV data. Sediment retention is predicted to vary seasonally with seasonal vegetation composition changes and remain constant in unvegetated areas. From this experiment we expect to identify like groups of plant species whose attenuation characteristics are the same, allowing for models of wave-vegetation-sediment interaction to be created with multiple vegetation types.

Significance of rhizosphere microorganisms in reclaiming water in a CELSS

NASA Astrophysics Data System (ADS)

1997-01-01

Plant-microbe interactions, such as those of the rhizosphere, may be ideally suited for recycling water in a Controlled Ecological Life Support System (CELSS). The primary contaminant of waste hygiene water will be surfactants or soaps. We identified changes in the microbial ecology in the rhizosphere of hydroponically grown lettuce during exposure to surfactant. Six week old lettuce plants were transferred into a chamber with a recirculating hydroponic system. Microbial density and population composition were determined for the nutrient solution prior to introduction of plants and then again with plants prior to surfactant addition. The surfactant Igepon was added to the recirculating nutrient solution to a final concentration of 1.0 g L-1. Bacteria density and species diversity of the solution were monitored over a 72-h period following introduction of Igepon. Nine distinct bacterial types were identified in the rhisosphere; three species accounted for 87% of the normal rhizosphere population. Microbial cell number increased in the presence of Igepon, however species diversity declined. At the point when Igepon was degraded from solution, diversity was reduced to only two species. Igepon was found to be degraded directly by only one species found in the rhizosphere. Since surfactants are degraded from the waste hygiene water within 24 h, the potential for using rhizosphere bacteria as a waste processor in a CELSS is promising.

Significance of rhizosphere microorganisms in reclaiming water in a CELSS

NASA Astrophysics Data System (ADS)

Greene, C.; Bubenheim, D. L.; Wignarajah, K.

1997-01-01

Plant-microbe interactions, such as those of the rhizosphere, may be ideally suited for recycling water in a Controlled Ecological Life Support System (CELSS). The primary contaminant of waste hygiene water will be surfactants or soaps. We identified changes in the microbial ecology in the rhizosphere of hydroponically grown lettuce during exposure to surfactant. Six week old lettuce plants were transferred into a chamber with a recirculating hydroponic system. Microbial density and population composition were determined for the nutrient solution prior to introduction of plants and then again with plants prior to surfactant addition. The surfactant Igepon was added to the recirculating nutrient solution to a final concentration of 1.0 g L^-1. Bacteria density and species diversity of the solution were monitored over a 72-h period following introduction of Igepon. Nine distinct bacterial types were identified in the rhisosphere; three species accounted for 87% of the normal rhizosphere population. Microbial cell number increased in the presence of Igepon, however species diversity declined. At the point when Igepon was degraded from solution, diversity was reduced to only two species. Igepon was found to be degraded directly by only one species found in the rhizosphere. Since surfactants are degraded from the waste hygiene water within 24 h, the potential for using rhizosphere bacteria as a waste processor in a CELSS is promising.

Methane seepage effects on biodiversity and biological traits of macrofauna inhabiting authigenic carbonates

NASA Astrophysics Data System (ADS)

Levin, Lisa A.; Mendoza, Guillermo F.; Grupe, Benjamin M.

2017-03-01

Authigenic carbonate rocks at methane seeps are recognized as hosting diverse and abundant invertebrate assemblages, with potential forcing from fluid seepage and hydrography. Mensurative studies of carbonate macrofauna (>0.3 mm) at Hydrate Ridge, OR revealed little effect of water depth and overlying oxygenation (at 600 m and 800 m) but a large influence of seepage activity on density, taxonomic composition, diversity, and biological traits (feeding, lifestyle, motility, size and calcification). Rocks exposed to active seepage had 3-4× higher total macrofaunal densities than under inactive conditions. Assemblages exhibited higher species richness and reduced evenness (greater dominance) under active seepage than inactive conditions, but no difference in H‧ or rarefaction diversity. Actively seeping sites were characterized by errant (motile), bacterial grazing, small- and medium-sized, heavily calcified species, whereas inactive sites exhibited a greater diversity of feeding modes and more burrowers, sessile, large and lightly calcified species. Active rocks supported more exogonid (Syllidae), ampharetid, and cirratulid polychaetes, provannid snails, pyropeltid limpets, nemerteans, and sponges; whereas inactive rocks supported higher densities of ophiuroids, isopods, gammarid amphipods, hydroids, Typosyllis (Syllidae) and tanaids. Transplant experiments, in which rocks were transferred between active and inactive sites at Hydrate Ridge North (600 m), revealed that assemblages respond within 13 months to increase or cessation of seepage, taking on the feeding, size and calcification characteristics of the background fauna at the new site. Lifestyles and motility patterns shifted more slowly as the sessile, attached species did not track seepage as quickly. Provannid snails and pyropeltid limpets rapidly colonized rocks transplanted to active sites and disappeared when transplanted to inactive sites. Given the known variability of fluid fluxes and rapid community response, a mosaic of communities changing in space and time is hypothesized to generate the relatively high species diversity at methane seeps.

Formation of Mesoherpetobionts Communities on a Reclamated Coal Open Pit Dump

NASA Astrophysics Data System (ADS)

Luzyanin, Sergey; Eremeeva, Natalya

2017-11-01

The structure of the mesoherpetobionts arthropod communities of the reclamated dump of the Krasnobrodsky coal pit (Kemerovo region, Russia) has been studied. It was established that the pioneer grouping of mesoherpetobionts arthropod represented by classes of Chilopoda, Arachnida and Insecta-Ectognatha has been formed on the dump for two years after the soil deposition. From the Arachnida, the species of the order Aranei are the most active in the stocking of the dumps. From the class Chilopoda, the species of Lithobiomorpha appear the first on the dump. Insects from the following three orders, Heteroptera, Hymenoptera and especially Coleoptera take the main part in the expansion of dumps and the formation of primary communities. Among the Coleoptera, the beetles of the family of Carabidae (44 species, dynamic density 22.9 specimens/10 trapped per day) dominate. From them, small or medium-sized species are mainly involved in stocking the dumps. There are significant differences in the complexes of ground dump carabid beetles in comparison with the control group, differing in species composition of dominant species, species richness and species diversity parameters

On the analysis of incoherent scatter radar data from non-thermal ionospheric plasma - Effects of measurement noise and an inexact theory

NASA Astrophysics Data System (ADS)

Suvanto, K.

1990-07-01

Statistical inversion theory is employed to estimate parameter uncertainties in incoherent scatter radar studies of non-Maxwellian ionospheric plasma. Measurement noise and the inexact nature of the plasma model are considered as potential sources of error. In most of the cases investigated here, it is not possible to determine electron density, line-of-sight ion and electron temperatures, ion composition, and two non-Maxwellian shape factors simultaneously. However, if the molecular ion velocity distribution is highly non-Maxwellian, all these quantities can sometimes be retrieved from the data. This theoretical result supports the validity of the only successful non-Maxwellian, mixed-species fit discussed in the literature. A priori information on one of the parameters, e.g., the electron density, often reduces the parameter uncertainties significantly and makes composition fits possible even if the six-parameter fit cannot be performed. However, small (less than 0.5) non-Maxwellian shape factors remain difficult to distinguish.

When winners become losers: Predicted nonlinear responses of arctic birds to increasing woody vegetation

USGS Publications Warehouse

Thompson, Sarah J.; Handel, Colleen M.; Richardson, Rachel M.; McNew, Lance B.

2016-01-01

Climate change is facilitating rapid changes in the composition and distribution of vegetation at northern latitudes, raising questions about the responses of wildlife that rely on arctic ecosystems. One widely observed change occurring in arctic tundra ecosystems is an increasing dominance of deciduous shrub vegetation. Our goals were to examine the tolerance of arctic-nesting bird species to existing gradients of vegetation along the boreal forest-tundra ecotone, to predict the abundance of species across different heights and densities of shrubs, and to identify species that will be most or least responsive to ongoing expansion of shrubs in tundra ecosystems. We conducted 1,208 point counts on 12 study blocks from 2012–2014 in northwestern Alaska, using repeated surveys to account for imperfect detection of birds. We considered the importance of shrub height, density of low and tall shrubs (i.e. shrubs >0.5 m tall), percent of ground cover attributed to shrubs (including dwarf shrubs <0.5 m tall), and percent of herbaceous plant cover in predicting bird abundance. Among 17 species considered, only gray-cheeked thrush (Catharus minimus) abundance was associated with the highest values of all shrub metrics in its top predictive model. All other species either declined in abundance in response to one or more shrub metrics or reached a threshold where further increases in shrubs did not contribute to greater abundance. In many instances the relationship between avian abundance and shrubs was nonlinear, with predicted abundance peaking at moderate values of the covariate, then declining at high values. In particular, a large number of species were responsive to increasing values of average shrub height with six species having highest abundance at near-zero values of shrub height and abundance of four other species decreasing once heights reached moderate values (≤ 33 cm). Our findings suggest that increases in shrub cover and density will negatively affect abundance of only a few bird species and may potentially be beneficial for many others. As shrub height increases further, however, a considerable number of tundra bird species will likely find habitat increasingly unsuitable.

When Winners Become Losers: Predicted Nonlinear Responses of Arctic Birds to Increasing Woody Vegetation

PubMed Central

Thompson, Sarah J.; Handel, Colleen M.; Richardson, Rachel M.; McNew, Lance B.

2016-01-01

Climate change is facilitating rapid changes in the composition and distribution of vegetation at northern latitudes, raising questions about the responses of wildlife that rely on arctic ecosystems. One widely observed change occurring in arctic tundra ecosystems is an increasing dominance of deciduous shrub vegetation. Our goals were to examine the tolerance of arctic-nesting bird species to existing gradients of vegetation along the boreal forest-tundra ecotone, to predict the abundance of species across different heights and densities of shrubs, and to identify species that will be most or least responsive to ongoing expansion of shrubs in tundra ecosystems. We conducted 1,208 point counts on 12 study blocks from 2012–2014 in northwestern Alaska, using repeated surveys to account for imperfect detection of birds. We considered the importance of shrub height, density of low and tall shrubs (i.e. shrubs >0.5 m tall), percent of ground cover attributed to shrubs (including dwarf shrubs <0.5 m tall), and percent of herbaceous plant cover in predicting bird abundance. Among 17 species considered, only gray-cheeked thrush (Catharus minimus) abundance was associated with the highest values of all shrub metrics in its top predictive model. All other species either declined in abundance in response to one or more shrub metrics or reached a threshold where further increases in shrubs did not contribute to greater abundance. In many instances the relationship between avian abundance and shrubs was nonlinear, with predicted abundance peaking at moderate values of the covariate, then declining at high values. In particular, a large number of species were responsive to increasing values of average shrub height with six species having highest abundance at near-zero values of shrub height and abundance of four other species decreasing once heights reached moderate values (≤ 33 cm). Our findings suggest that increases in shrub cover and density will negatively affect abundance of only a few bird species and may potentially be beneficial for many others. As shrub height increases further, however, a considerable number of tundra bird species will likely find habitat increasingly unsuitable. PMID:27851768

Transpiration of urban forests in the Los Angeles metropolitan area.

PubMed

Pataki, Diane E; McCarthy, Heather R; Litvak, Elizaveta; Pincetl, Stephanie

2011-04-01

Despite its importance for urban planning, landscape management, and water management, there are very few in situ estimates of urban-forest transpiration. Because urban forests contain an unusual and diverse mix of species from many regions worldwide, we hypothesized that species composition would be a more important driver of spatial variability in urban-forest transpiration than meteorological variables in the Los Angeles (California, USA) region. We used constant-heat sap-flow sensors to monitor urban tree water use for 15 species at six locations throughout the Los Angeles metropolitan area. For many of these species no previous data on sap flux, water use, or water relations were available in the literature. To scale sap-flux measurements to whole trees we conducted a literature survey of radial trends in sap flux across multiple species and found consistent relationships for angiosperms vs. gymnosperms. We applied this relationship to our measurements and estimated whole-tree and plot-level transpiration at our sites. The results supported very large species differences in transpiration, with estimates ranging from 3.2 +/- 2.3 kg x tree(-1) x d(-1) in unirrigated Pinus canariensis (Canary Island pine) to 176.9 +/- 75.2 kg x tree(-1) x d(-1) in Platanus hybrida (London planetree) in the month of August. Other species with high daily transpiration rates included Ficus microcarpa (laurel fig), Gleditsia triacanthos (honeylocust), and Platanus racemosa (California sycamore). Despite irrigation and relatively large tree size, Brachychiton populneas (kurrajong), B. discolor (lacebark), Sequoia sempervirens (redwood), and Eucalyptus grandis (grand Eucalyptus) showed relatively low rates of transpiration, with values < 45 kg x tree(-1) x d(-1). When scaled to the plot level, transpiration rates were as high as 2 mm/d for sites that contained both species with high transpiration rates and high densities of planted trees. Because plot-level transpiration is highly dependent on tree density, we modeled transpiration as a function of both species and density to evaluate a likely range of values in irrigated urban forests. The results show that urban forests in irrigated, semi-arid regions can constitute a significant use of water, but water use can be mitigated by appropriate selection of site, management method, and species.

Persistence of Neighborhood Demographic Influences over Long Phylogenetic Distances May Help Drive Post-Speciation Adaptation in Tropical Forests.

PubMed

Wills, Christopher; Harms, Kyle E; Wiegand, Thorsten; Punchi-Manage, Ruwan; Gilbert, Gregory S; Erickson, David; Kress, W John; Hubbell, Stephen P; Gunatilleke, C V Savitri; Gunatilleke, I A U Nimal

2016-01-01

Studies of forest dynamics plots (FDPs) have revealed a variety of negative density-dependent (NDD) demographic interactions, especially among conspecific trees. These interactions can affect growth rate, recruitment and mortality, and they play a central role in the maintenance of species diversity in these complex ecosystems. Here we use an equal area annulus (EAA) point-pattern method to comprehensively analyze data from two tropical FDPs, Barro Colorado Island in Panama and Sinharaja in Sri Lanka. We show that these NDD interactions also influence the continued evolutionary diversification of even distantly related tree species in these FDPs. We examine the details of a wide range of these interactions between individual trees and the trees that surround them. All these interactions, and their cumulative effects, are strongest among conspecific focal and surrounding tree species in both FDPs. They diminish in magnitude with increasing phylogenetic distance between heterospecific focal and surrounding trees, but do not disappear or change the pattern of their dependence on size, density, frequency or physical distance even among the most distantly related trees. The phylogenetic persistence of all these effects provides evidence that interactions between tree species that share an ecosystem may continue to promote adaptive divergence even after the species' gene pools have become separated. Adaptive divergence among taxa would operate in stark contrast to an alternative possibility that has previously been suggested, that distantly related species with dispersal-limited distributions and confronted with unpredictable neighbors will tend to converge on common strategies of resource use. In addition, we have also uncovered a positive density-dependent effect: growth rates of large trees are boosted in the presence of a smaller basal area of surrounding trees. We also show that many of the NDD interactions switch sign rapidly as focal trees grow in size, and that their cumulative effect can strongly influence the distributions and species composition of the trees that surround the focal trees during the focal trees' lifetimes.

Native arbuscular mycorrhizal fungi in the Yungas forests, Argentina.

PubMed

Becerra, Alejandra G; Cabello, Marta N; Bartoloni, Norberto J

2011-01-01

The arbuscular mycorrhizal fungal (AMF) communities from the Yungas forests of Argentina were studied. The AMF species present in the rhizosphere of some dominant native plants (one tree: Alnus acuminata; three herbaceous species: Duchesnea indica, Oxalis conorrhiza, Trifolium aff. repens; and one shrub: Sambucus peruviana) from two sites (Quebrada del Portugués and Narváez Range) of the Yungas forests were isolated, identified and quantified during the four seasons of the year. Twenty-two AMF morphotaxa were found. Spore density of some AMF species at each site varied among seasons. The genera that most contributed to the biodiversity index were Acaulospora for Quebrada del Portugués and Glomus for Narváez Range. High diversity values were observed in the Yungas forests, particularly in the spring (rainy season). We concluded AMF differed in species composition and seasonal sporulation dynamics in the Yungas forests.

Variations of summer phytoplankton community related to environmental factors in a macro-tidal estuarine embayment, Hangzhou Bay, China

NASA Astrophysics Data System (ADS)

Zhang, Yuexia; Yu, Jun; Jiang, Zhibing; Wang, Qin; Wang, Hui

2015-12-01

To explore the distribution and composition of phytoplankton community and their responses to environmental changes, summer net-collected phytoplankton and physicochemical parameters in the Hangzhou Bay during 2004-2010 were investigated. A total of four phyla and 84 species were identified, including 67 diatom and 12 dinoflagellate species. The dominant species constantly consisted of the diatoms, although the dominance of dinoflagellate and cyanobacteria increased recently. Due to great spatio-temporal variations in environmental factors (salinity, suspended solids, and nutrient concentration), significant heterogeneities in community compositions among different years and subregions (inner and middle sections, and bay mouth) were found based on the analyses of multidimensional scaling and similarity. Canonical correspondence analysis showed that salinity and Si/N were the main variables associated with algal assemblage. Compared with the historical data since the 1980s, eutrophication (N, P, and N/P increased with decreasing Si/N) was exacerbated drastically. Moreover, climatic forcing and human activities resulted in a series of physical alterations, including sediment retention, temperature increase, and salinity decrease as well as reduction in water exchanges. All these changes induced obvious increases in cell density and Chl- a while decreases in species diversity and diatom-dinoflagellate ratio as well as the shifting of dominant species. Therefore, the long-term phytoplankton variations were closely related to anthropogenic and climatic perturbations in the Hangzhou Bay.

Ion composition at comet 67P near perihelion: Rosetta/ROSINA measurements and modeling

NASA Astrophysics Data System (ADS)

Beth, Arnaud; Altwegg, Kathrin; Balsiger, Hans; Berthelier, Jean-Jacques; Calmonte, Ursina; Combi, Michael R.; De Keyser, Johan; Dhooghe, Frederik; Fiethe, Björn; Fuselier, Stephen; Galand, Marina; Gasc, Sébastien; Gombosi, T. I.; Hansen, Kenneth C.; Hässig, Myrtha; Héritier, Kévin; Kopp, Ernest; Le Roy, Léna; Peroy, Solène; Rubin, Martin; Sémon, Thierry; Tzou, Chia-Yu; Vigren, Erik

2016-10-01

On August 13th, 2015, comet 67P/Churyumov-Gerasimenko reached its perihelion at 1.24 AU, a milestone for its cometary activity observed by the European Space Agency's Rosetta spacecraft which arrived in August 2014. The Rosetta Orbiter Spectrometer for Ion and Neutral Analysis (ROSINA)/Comet Pressure Sensor (COPS) instrument onboard Rosetta measured local outgassing rates over 1028 molecules.s-1 in summer 2015. In the meantime, the ROSINA/Double Focusing Mass Spectrometer (DFMS) instrument measured the ion composition in the coma which was expected to be more diversified than during the early phase of the mission. Indeed, the increase in the cometary activity is expected to trigger new chemical pathways, yielding the formation of new cometary ions, other than the major water ions observed at larger heliocentric distances. Such new ion species can be produced from minor neutral species, such as those with proton affinity higher than that of water. This includes NH4+ whose detection has been recently reported (Beth et al., 2016).In this study, we propose to investigate other ion species during the perihelion period by:- analysing DFMS data to find any signature of substantial ion species,- modeling the ionosphere of 67P by driving the model with the neutral densities measured by DFMS and COPS to support or constrain the absence or the presence of these ion species,- discussing any discrepancy between observations and simulations.

Grassland bird response to harvesting switchgrass as a biomass energy crop

USGS Publications Warehouse

Roth, A.M.; Sample, D.W.; Ribic, C.A.; Paine, L.; Undersander, D.J.; Bartelt, G.A.

2005-01-01

The combustion of perennial grass biomass to generate electricity may be a promising renewable energy option. Switchgrass (Panicum virgatum) grown as a biofuel has the potential to provide a cash crop for farmers and quality nesting cover for grassland birds. In southwestern Wisconsin (near lat. 42??52???, long. 90??08???), we investigated the impact of an August harvest of switchgrass for bioenergy on community composition and abundance of Wisconsin grassland bird species of management concern. Harvesting the switchgrass in August resulted in changes in vegetation structure and bird species composition the following nesting season. In harvested transects, residual vegetation was shorter and the litter layer was reduced in the year following harvest. Grassland bird species that preferred vegetation of short to moderate height and low to moderate density were found in harvested areas. Unharvested areas provided tall, dense vegetation structure that was especially attractive to tall-grass bird species, such as sedge wren (Cistothorus platensis) and Henslow's sparrow (Ammodramus henslowii). When considering wildlife habitat value in harvest management of switchgrass for biofuel, leaving some fields unharvested each year would be a good compromise, providing some habitat for a larger number of grassland bird species of management concern than if all fields were harvested annually. In areas where most idle grassland habitat present on the landscape is tallgrass, harvest of switchgrass for biofuel has the potential to increase the local diversity of grassland birds.

Lignin composition is related to xylem embolism resistance and leaf life span in trees in a tropical semiarid climate.

PubMed

Lima, Taysla R A; Carvalho, Ellen C D; Martins, Fernando R; Oliveira, Rafael S; Miranda, Rafael S; Müller, Caroline S; Pereira, Luciano; Bittencourt, Paulo R L; Sobczak, Jullyana C M S M; Gomes-Filho, Enéas; Costa, Rafael C; Araújo, Francisca S

2018-05-16

Wood properties influence the leaf life span (LL) of tree crowns. As lignin is an important component of wood and the water transport system, we investigated its relationship with embolism resistance and the LL of several tree species in a seasonally dry tropical ecosystem. We determined total lignin and the monomer contents of guaiacyl (G) and syringyl (S) and related them to wood traits and xylem vulnerability to embolism (Ψ 50 ) for the most common species of the Brazilian semiarid, locally known as Caatinga. Leaf life span was negatively related to Ψ 50 and positively related to S : G, which was negatively related to Ψ 50 . This means that greater S : G increases LL by reducing Ψ 50 . Lignin content was not correlated with any variable. We found two apparently unrelated axes of drought resistance. One axis, associated with lignin monomeric composition, increases LL in the dry season as a result of lower xylem embolism vulnerability. The other, associated with wood density and stem water content, helps leafless trees to withstand drought and allows them to resprout at the end of the dry season. The monomeric composition of lignin (S : G) is therefore an important functional wood attribute affecting several key functional aspects of tropical tree species in a semiarid climate. © 2018 The Authors. New Phytologist © 2018 New Phytologist Trust.

Distribution, composition and functions of gelatinous tissues in deep-sea fishes.

PubMed

Gerringer, Mackenzie E; Drazen, Jeffrey C; Linley, Thomas D; Summers, Adam P; Jamieson, Alan J; Yancey, Paul H

2017-12-01

Many deep-sea fishes have a gelatinous layer, or subdermal extracellular matrix, below the skin or around the spine. We document the distribution of gelatinous tissues across fish families (approx. 200 species in ten orders), then review and investigate their composition and function. Gelatinous tissues from nine species were analysed for water content (96.53 ± 1.78% s.d.), ionic composition, osmolality, protein (0.39 ± 0.23%), lipid (0.69 ± 0.56%) and carbohydrate (0.61 ± 0.28%). Results suggest that gelatinous tissues are mostly extracellular fluid, which may allow animals to grow inexpensively. Further, almost all gelatinous tissues floated in cold seawater, thus their lower density than seawater may contribute to buoyancy in some species. We also propose a new hypothesis: gelatinous tissues, which are inexpensive to grow, may sometimes be a method to increase swimming efficiency by fairing the transition from trunk to tail. Such a layer is particularly prominent in hadal snailfishes (Liparidae); therefore, a robotic snailfish model was designed and constructed to analyse the influence of gelatinous tissues on locomotory performance. The model swam faster with a watery layer, representing gelatinous tissue, around the tail than without. Results suggest that the tissues may, in addition to providing buoyancy and low-cost growth, aid deep-sea fish locomotion.

Distribution, composition and functions of gelatinous tissues in deep-sea fishes

PubMed Central

Drazen, Jeffrey C.; Linley, Thomas D.; Summers, Adam P.; Jamieson, Alan J.; Yancey, Paul H.

2017-01-01

Many deep-sea fishes have a gelatinous layer, or subdermal extracellular matrix, below the skin or around the spine. We document the distribution of gelatinous tissues across fish families (approx. 200 species in ten orders), then review and investigate their composition and function. Gelatinous tissues from nine species were analysed for water content (96.53 ± 1.78% s.d.), ionic composition, osmolality, protein (0.39 ± 0.23%), lipid (0.69 ± 0.56%) and carbohydrate (0.61 ± 0.28%). Results suggest that gelatinous tissues are mostly extracellular fluid, which may allow animals to grow inexpensively. Further, almost all gelatinous tissues floated in cold seawater, thus their lower density than seawater may contribute to buoyancy in some species. We also propose a new hypothesis: gelatinous tissues, which are inexpensive to grow, may sometimes be a method to increase swimming efficiency by fairing the transition from trunk to tail. Such a layer is particularly prominent in hadal snailfishes (Liparidae); therefore, a robotic snailfish model was designed and constructed to analyse the influence of gelatinous tissues on locomotory performance. The model swam faster with a watery layer, representing gelatinous tissue, around the tail than without. Results suggest that the tissues may, in addition to providing buoyancy and low-cost growth, aid deep-sea fish locomotion. PMID:29308245

Soil-vegetation relationships on a banded ironstone 'island', Carajás Plateau, Brazilian Eastern Amazonia.

PubMed

Nunes, Jaquelina A; Schaefer, Carlos E G R; Ferreira Júnior, Walnir G; Neri, Andreza V; Correa, Guilherme R; Enright, Neal J

2015-01-01

Vegetation and soil properties of an iron-rich canga (laterite) island on the largest outcrop of banded-iron formation in Serra de Carajás (eastern Amazonia, Brazil) were studied along a topographic gradient (738-762 m asl), and analyzed to test the hypothesis that soil chemical and physical attributes play a key role in the structure and floristic composition of these plant communities. Soil and vegetation were sampled in eight replicate plots within each of the four vegetation types. Surface (0-10 cm) soil samples from each plot were analyzed for basic cations, N, P and plant species density for all species was recorded. CCA ordination analysis showed a strong separation between forest and non-forest sites on the first axis, and between herbaceous and shrubby campo rupestre on the second axis. The four vegetation types shared few plant species, which was attributed to their distinctive soil environments and filtering of their constituent species by chemical, physical and hydrological constraints. Thus, we can infer that Edaphic (pedological) factors are crucial in explaining the types and distributions of campo rupestre vegetation associated with ferruginous ironstone uplands (Canga) in Carajás, eastern Amazonia, therefore the soil properties are the main drivers of vegetation composition and structure on these ironstone islands.

Planktonic Rotifers in a Subtropical Shallow Lake: Succession, Relationship to Environmental Factors, and Use as Bioindicators

PubMed Central

Wang, Xianyun; Wang, Liqing

2013-01-01

Changes in the density and species composition of planktonic rotifers as well as their relationship to several environmental variables were studied at Dadian Lake, a shallow subtropical lake, which was completely dredged and reconstructed. Samples were taken monthly (2006–2009) at five stations. The total rotifer abundance exponentially declined and reached a relatively stable stage in 2009. Polyarthra dolichoptera and Trichocerca pusilla dominated the rotifer community in most seasons. TN, TP, and CODMn went down at the beginning of the monitoring period, rebounded in the second winter, and then decreased and reached a stable state in 2009. CCA showed that the most significant variations were caused by fluctuations in temperature, CODMn, SRP, and NO2-N. The rotifer community experienced a two-stage succession and the difference of species between the stages was exhibited during warm seasons. GAMs indicated that the selected factors were responsible for 64.8% of the total rotifer abundance variance and 16.5~64.3% of the variances of individual species abundance. Most of the environmental parameters had effects on rotifer abundance that could only be described by complicated curves, characterised by unimodality and bimodality instead of linearity. Our study highlighted the temperature influence on rotifer species composition and total abundance in subtropical lakes. PMID:23864829

Copepod colonization of organic and inorganic substrata at a deep-sea hydrothermal vent site on the Mid-Atlantic Ridge

NASA Astrophysics Data System (ADS)

Plum, Christoph; Pradillon, Florence; Fujiwara, Yoshihiro; Sarrazin, Jozée

2017-03-01

The few existing studies on deep-sea hydrothermal vent copepods indicate low connectivity with surrounding environments and reveal high endemism among vents. However, the finding of non-endemic copepod species in association with engineer species at different reduced ecosystems poses questions about the dispersal of copepods and the colonization of hydrothermal vents as well as their ecological connectivity. The objective of this study is to understand copepod colonization patterns at a hydrothermal vent site in response to environmental factors such as temperature and fluid flow as well as the presence of different types of substrata. To address this objective, an in situ experiment was deployed using both organic (woods, pig bones) and inorganic (slates) substrata along a gradient of hydrothermal activity at the Lucky Strike vent field (Eiffel Tower, Mid-Atlantic Ridge). The substrata were deployed in 2011 during the MoMARSAT cruise and were recovered after two years in 2013. Overall, copepod density showed significant differences between substrata types, but was similar among different hydrothermal activity regimes. Highest densities were observed on woods at sites with moderate or low fluid input, whereas bones were the most densely colonized substrata at the 2 sites with higher hydrothermal influence. Although differences in copepod diversity were not significant, the observed trends revealed overall increasing diversity with decreasing temperature and fluid input. Slates showed highest diversity compared to the organic substrata. Temperature and fluid input had a significant influence on copepod community composition, resulting in higher similarity among stations with relatively high and low fluid inputs, respectively. While vent-specialists such as dirivultids and the tegastid Smacigastes micheli dominated substrata at high vent activity, the experiment demonstrated increasing abundance and dominance of non-vent taxa with decreasing temperature and fluid input. Effects of the substratum type on community composition were not significant, although at sites with moderate or low fluid input, woods exhibited distinctive communities with high densities and relative abundance of the taxon Nitocrella sp. In conclusion, copepod colonization and species composition were mainly influenced by hydrothermal fluid input and temperature rather than the type of substratum. The outcome of this study provides fundamental knowledge to better understand copepod colonization at hydrothermal vents.

Yeast and Macroinvertebrate Communities Associated with Leaf Litter Decomposition in a Second Order Stream

NASA Astrophysics Data System (ADS)

Sampaio, Ana; Cortes, Rui; Leão, Cecília

2004-11-01

The composition of yeast and macroinvertebrate communities was studied on black alder, blue gum eucalyptus and English oak leaves decaying in a stream during a six-month period. ANOVA analysis showed significantly different values (p < 0.0001) of yeast and macroinvertebrate densities among the three leaf litters. Some yeast species such as Cryptococcus albidus (Saito), C. laurentii (Kufferath), Rhodothorula glutinis (Fresenius), R. colostri (Castelli), and Debaryomyces hansenii (Lodder and Kreger-van Rij) were present in all litter types. Other yeasts were restricted to a specific type of litter. Macroinvertebrates were dominated by collectors-gatherers on oak and eucalyptus leaves. Shredders reached highest densities in alder leaves. (

Comparison of aboveground vegetation and soil seed bank composition at sites of different grazing intensity around a savanna-woodland watering point in West Africa.

PubMed

Sanou, Lassina; Zida, Didier; Savadogo, Patrice; Thiombiano, Adjima

2018-06-11

Grazing removes a plant's aboveground vegetative and reproductive tissues and can modify the soil seed bank, potentially impacting the restoration of preferred species. Knowledge about aboveground vegetation and species composition of soil seed bank and the processes that contribute to vegetation recovery on and surrounding watering points subjected to grazing is lacking. Successful restoration strategies hinge on addressing these knowledge gaps. We assessed the effects of livestock grazing on aboveground vegetation and soil seed bank characteristics along a river bank and surrounding areas subject to different grazing intensities and draw implications for restoration. Plots (50 × 50 m) were established along five transects representing differing levels of grazing intensity. Soil samples were taken from three layers within each plot to determine soil properties and species composition of soil seed bank using the seedling emergence method. Heavy grazing resulted in the disappearance of perennial grasses, a reduction in species diversity and a decrease in soil nutrients with increased soil depth. Overall, the similarity between the extant aboveground vegetation and flora within the soil seed bank was low. The soil seed bank was dominated by herbaceous species and two woody species, suggesting that many woody species are not accumulating in the soil. With increasing soil depth, the seed density and richness declined. Canonical correspondence analyses (CCAs) showed that emerged seedlings from the soil seed bank were significantly influenced by soil carbon, organic matter, total nitrogen, total potassium and soil cation exchange capacity. This finding suggests that current grazing practices have a negative impact on the vegetation surrounding watering points; hence there is a need for improved grazing management strategies and vegetation restoration in these areas. The soil seed bank alone cannot restore degraded river banks; active transfer of propagules from adjacent undisturbed forest areas is essential.

Seeding method influences warm-season grass abundance and distribution but not local diversity in grassland restoration

USGS Publications Warehouse

Yurkonis, Kathryn A.; Wilsey, Brian J.; Moloney, Kirk A.; Drobney, Pauline; Larson, Diane L.

2010-01-01

Ecological theory predicts that the arrangement of seedlings in newly restored communities may influence future species diversity and composition. We test the prediction that smaller distances between neighboring seeds in drill seeded grassland plantings would result in lower species diversity, greater weed abundance, and larger conspecific patch sizes than otherwise similar broadcast seeded plantings. A diverse grassland seed mix was either drill seeded, which places seeds in equally spaced rows, or broadcast seeded, which spreads seeds across the ground surface, into 24 plots in each of three sites in 2005. In summer 2007, we measured species abundance in a 1 m2 quadrat in each plot and mapped common species within the quadrat by recording the most abundant species in each of 64 cells. Quadrat-scale diversity and weed abundance were similar between drilled and broadcast plots, suggesting that processes that limited establishment and controlled invasion were not affected by such fine-scale seed distribution. However, native warm-season (C4) grasses were more abundant and occurred in less compact patches in drilled plots. This difference in C4 grass abundance and distribution may result from increased germination or vegetative propagation of C4 grasses in drilled plots. Our findings suggest that local plant density may control fine-scale heterogeneity and species composition in restored grasslands, processes that need to be further investigated to determine whether seed distributions can be manipulated to increase diversity in restored grasslands.

Seeding Method Influences Warm-Season Grass Abundance and Distribution but not Local Diversity in Grassland Restoration

USGS Publications Warehouse

Yurkonis, K.A.; Wilsey, B.J.; Moloney, K.A.; Drobney, P.; Larson, D.L.

2010-01-01

Ecological theory predicts that the arrangement of seedlings in newly restored communities may influence future species diversity and composition. We test the prediction that smaller distances between neighboring seeds in drill seeded grassland plantings would result in lower species diversity, greater weed abundance, and larger conspecific patch sizes than otherwise similar broadcast seeded plantings. A diverse grassland seed mix was either drill seeded, which places seeds in equally spaced rows, or broadcast seeded, which spreads seeds across the ground surface, into 24 plots in each of three sites in 2005. In summer 2007, we measured species abundance in a 1 m2 quadrat in each plot and mapped common species within the quadrat by recording the most abundant species in each of 64 cells. Quadrat-scale diversity and weed abundance were similar between drilled and broadcast plots, suggesting that processes that limited establishment and controlled invasion were not affected by such fine-scale seed distribution. However, native warm-season (C4) grasses were more abundant and occurred in less compact patches in drilled plots. This difference in C4 grass abundance and distribution may result from increased germination or vegetative propagation of C4 grasses in drilled plots. Our findings suggest that local plant density may control fine-scale heterogeneity and species composition in restored grasslands, processes that need to be further investigated to determine whether seed distributions can be manipulated to increase diversity in restored grasslands. ?? 2010 Society for Ecological Restoration International.

Vegetation composition and structure of southern coastal plain pine forests: An ecological comparison

USGS Publications Warehouse

Hedman, C.W.; Grace, S.L.; King, S.E.

2000-01-01

Longleaf pine (Pinus palustris) ecosystems are characterized by a diverse community of native groundcover species. Critics of plantation forestry claim that loblolly (Pinus taeda) and slash pine (Pinus elliottii) forests are devoid of native groundcover due to associated management practices. As a result of these practices, some believe that ecosystem functions characteristic of longleaf pine are lost under loblolly and slash pine plantation management. Our objective was to quantify and compare vegetation composition and structure of longleaf, loblolly, and slash pine forests of differing ages, management strategies, and land-use histories. Information from this study will further our understanding and lead to inferences about functional differences among pine cover types. Vegetation and environmental data were collected in 49 overstory plots across Southlands Experiment Forest in Bainbridge, GA. Nested plots, i.e. midstory, understory, and herbaceous, were replicated four times within each overstory plot. Over 400 species were identified. Herbaceous species richness was variable for all three pine cover types. Herbaceous richness for longleaf, slash, and loblolly pine averaged 15, 13, and 12 species per m2, respectively. Longleaf pine plots had significantly more (p < 0.029) herbaceous species and greater herbaceous cover (p < 0.001) than loblolly or slash pine plots. Longleaf and slash pine plots were otherwise similar in species richness and stand structure, both having lower overstory density, midstory density, and midstory cover than loblolly pine plots. Multivariate analyses provided additional perspectives on vegetation patterns. Ordination and classification procedures consistently placed herbaceous plots into two groups which we refer to as longleaf pine benchmark (34 plots) and non-benchmark (15 plots). Benchmark plots typically contained numerous herbaceous species characteristic of relic longleaf pine/wiregrass communities found in the area. Conversely, non-benchmark plots contained fewer species characteristic of relic longleaf pine/wiregrass communities and more ruderal species common to highly disturbed sites. The benchmark group included 12 naturally regenerated longleaf plots and 22 loblolly, slash, and longleaf pine plantation plots encompassing a broad range of silvicultural disturbances. Non-benchmark plots included eight afforested old-field plantation plots and seven cutover plantation plots. Regardless of overstory species, all afforested old fields were low either in native species richness or in abundance. Varying degrees of this groundcover condition were also found in some cutover plantation plots that were classified as non-benchmark. Environmental variables strongly influencing vegetation patterns included agricultural history and fire frequency. Results suggest that land-use history, particularly related to agriculture, has a greater influence on groundcover composition and structure in southern pine forests than more recent forest management activities or pine cover type. Additional research is needed to identify the potential for afforested old fields to recover native herbaceous species. In the interim, high-yield plantation management should initially target old-field sites which already support reduced numbers of groundcover species. Sites which have not been farmed in the past 50-60 years should be considered for longleaf pine restoration and multiple-use objectives, since they have the greatest potential for supporting diverse native vegetation. (C) 2000 Elsevier Science B.V.

Distribution and abundance patterns of the palila on Mauna Kea, Hawaii

USGS Publications Warehouse

van Riper, Charles; Scott, J. Michael; Woodside, D.M.

1978-01-01

Censuses of the known geographical range of the rare and endangered Palila were conducted in January (nonbreeding season) and September (breeding season) 1975. The habitat (mamane and naio forest of Mauna Kea, Hawaii) was divided into five major areas, with each analyzed for vegetational composition, phenology of the predominant tree species, and Palila density. Using a line transect census technique, we determined that: 1) the Palila occupied 5,560 ha, approximately 10% of its former range; 2) Palila populations were more restricted in the nonbreeding season, possibly reflecting their flocking tendency; 3) Palila densities were 38 birds per km2 in the breeding season and 36 birds per km2 in the nonbreeding season; 4) Palila population movements were small, and apparently were correlated with patterns of food availability; and 5) all methods of analysis yielded a projected population of approximately 1,600 birds. These low numbers, coupled with its restricted range, make the Palila one of the most vulnerable endangered species.

Quantitative analysis of American woodcock nest and brood habitat

USGS Publications Warehouse

Bourgeois, A.; Keppie, Daniel M.; Owen, Ray B.

1977-01-01

Sixteen nest and 19 brood sites of American woodcock (Philohela minoI) were examined in northern lower Michigan between 15 April and 15 June 1974 to determine habitat structure associated with these sites. Woodcock hens utilized young, second-growth forest stands which were similar in species composition for both nesting and brood rearing. A multi-varIate discriminant function analysis revealed a significant (P< 0.05) difference, however, in habitat structure. Nest habitat was characterized by lower tree density (2176 trees/ha) and basal area (8.6 m2/ha), by being close to forest openings (7 m) and by being situated on dry, relatively well drained sites. In contrast, woodcock broods were located in sites that had nearly twice the tree density (3934 trees/hal and basal area (16.5 m2/ha), was located over twice as far from forest openings (18 m) and generally occurred on damp sites, near (8 m) standing water. Importance of the habitat features to the species and possible management implications are discussed.

Complex depth-related patterns in taxonomic and functional diversity of polychaetes in the Gulf of Mexico

NASA Astrophysics Data System (ADS)

Carvalho, Russell; Wei, Chih-Lin; Rowe, Gilbert; Schulze, Anja

2013-10-01

Patterns of taxonomic and functional diversity in polychaete assemblages were examined in the deep northern Gulf of Mexico, including the first analysis of polychaete feeding guild distribution. An analysis of samples from a total of 51 stations located along 7 transects plus additional nearby sites, indicated that density decreased exponentially with depth, with the central locations having higher densities than the eastern and western regions. Alpha diversity was also highest at the central stations associated with the Mississippi trough. The samples can be grouped into three significant clusters based on thirty percent similarity of species composition. BIO-ENV indicated depth, sediment particle size, and export POC were most important variables explaining distributions. The diversity of polychaete feeding guilds was high in the Mississippi trough, upper and mid-slope regions but declined to a few guilds on the Sigsbee abyssal plain. Combining feeding guild analysis with traditional analysis of species diversity contributes to a clearer understanding of trophic diversity in deep-sea benthic assemblages.

Litter Species Composition and Topographic Effects on Fuels and Modeled Fire Behavior in an Oak-Hickory Forest in the Eastern USA

PubMed Central

Hutchinson, Todd F.; Dietenberger, Mark; Matt, Frederick; Peters, Matthew P.

2016-01-01

Mesophytic species (esp. Acer rubrum) are increasingly replacing oaks (Quercus spp.) in fire-suppressed, deciduous oak-hickory forests of the eastern US. A pivotal hypothesis is that fuel beds derived from mesophytic litter are less likely than beds derived from oak litter to carry a fire and, if they do, are more likely to burn at lower intensities. Species effects, however, are confounded by topographic gradients that affect overstory composition and fuel bed decomposition. To examine the separate and combined effects of litter species composition and topography on surface fuel beds, we conducted a common garden experiment in oak-hickory forests of the Ohio Hills. Each common garden included beds composed of mostly oak and mostly maple litter, representative of oak- and maple-dominated stands, respectively, and a mixture of the two. Beds were replenished each fall for four years. Common gardens (N = 16) were established at four topographic positions (ridges, benches on south- and northeast-facing slopes, and stream terraces) at each of four sites. Litter source and topographic position had largely independent effects on fuel beds and modeled fire dynamics after four years of development. Loading (kg m-2) of the upper litter layer (L), the layer that primarily supports flaming spread, was least in more mesic landscape positions and for maple beds, implying greater decomposition rates for those situations. Bulk density in the L layer (kg m-3) was least for oak beds which, along with higher loading, would promote fire spread and fireline intensity. Loading and bulk density of the combined fermentation and humic (FH) layers were least on stream terrace positions but were not related to species. Litter- and FH-layer moistures during a 5-day dry-down period after a rain event were affected by time and topographic effects while litter source effects were not evident. Characteristics of flaming combustion determined with a cone calorimeter pointed to greater fireline intensity for oak fuel beds and unexpected interactions between litter source and topography. A spread index, which synthesizes a suite of fuel bed, particle, and combustion characteristics to indicate spread (vs extinction) potential, was primarily affected by litter source and, secondarily, by the low spread potentials on mesic landscape positions early in the 5-day dry-down period. A similar result was obtained for modeled fireline intensity. Our results suggest that the continuing transition from oaks to mesophytic species in the Ohio Hills will reduce fire spread potentials and fire intensities. PMID:27536964

Litter Species Composition and Topographic Effects on Fuels and Modeled Fire Behavior in an Oak-Hickory Forest in the Eastern USA.

PubMed

Dickinson, Matthew B; Hutchinson, Todd F; Dietenberger, Mark; Matt, Frederick; Peters, Matthew P

2016-01-01

Mesophytic species (esp. Acer rubrum) are increasingly replacing oaks (Quercus spp.) in fire-suppressed, deciduous oak-hickory forests of the eastern US. A pivotal hypothesis is that fuel beds derived from mesophytic litter are less likely than beds derived from oak litter to carry a fire and, if they do, are more likely to burn at lower intensities. Species effects, however, are confounded by topographic gradients that affect overstory composition and fuel bed decomposition. To examine the separate and combined effects of litter species composition and topography on surface fuel beds, we conducted a common garden experiment in oak-hickory forests of the Ohio Hills. Each common garden included beds composed of mostly oak and mostly maple litter, representative of oak- and maple-dominated stands, respectively, and a mixture of the two. Beds were replenished each fall for four years. Common gardens (N = 16) were established at four topographic positions (ridges, benches on south- and northeast-facing slopes, and stream terraces) at each of four sites. Litter source and topographic position had largely independent effects on fuel beds and modeled fire dynamics after four years of development. Loading (kg m-2) of the upper litter layer (L), the layer that primarily supports flaming spread, was least in more mesic landscape positions and for maple beds, implying greater decomposition rates for those situations. Bulk density in the L layer (kg m-3) was least for oak beds which, along with higher loading, would promote fire spread and fireline intensity. Loading and bulk density of the combined fermentation and humic (FH) layers were least on stream terrace positions but were not related to species. Litter- and FH-layer moistures during a 5-day dry-down period after a rain event were affected by time and topographic effects while litter source effects were not evident. Characteristics of flaming combustion determined with a cone calorimeter pointed to greater fireline intensity for oak fuel beds and unexpected interactions between litter source and topography. A spread index, which synthesizes a suite of fuel bed, particle, and combustion characteristics to indicate spread (vs extinction) potential, was primarily affected by litter source and, secondarily, by the low spread potentials on mesic landscape positions early in the 5-day dry-down period. A similar result was obtained for modeled fireline intensity. Our results suggest that the continuing transition from oaks to mesophytic species in the Ohio Hills will reduce fire spread potentials and fire intensities.

Seagrasses in northern Gulf of Mexico: An ecosystem in trouble

USGS Publications Warehouse

,

2000-01-01

The USGS National Wetlands Research Center has documented that Seagrasses in the northern Gulf of Mexico constitute an ecosystem in trouble. From studies in St. Andrews Bay, Period Bay, the Chandeleur Islands, and the Gulf Islands National Seashore, scientists have discovered that declining seagrass acreage ranges from 12% to 66% in bays and estuaries of the Gulf of Mexico. Not only are seagrasses disappearing, but they are also changing in species composition, densities, and patchiness.

Species composition, diameter distribution, and crown class at initiation of a thinning study of pole-size hardwood stands in the Hoosier National Forest

Treesearch

Ryan L. Woods; Douglass F. Jacobs

2008-01-01

During the spring of 2007, a low thinning was implemented in stands on the Hoosier National Forest that had been clearcut harvested between 1975 and 1979; treatments consisted of 60- and 75-percent residual stocking, as well as control plots with no thinning. The 60-percent treatment increased the relative oak density per acre in all stands with the exception of one...

Light Limitation within Southern New Zealand Kelp Forest Communities

PubMed Central

Desmond, Matthew J.; Pritchard, Daniel W.; Hepburn, Christopher D.

2015-01-01

Light is the fundamental driver of primary productivity in the marine environment. Reduced light availability has the potential to alter the distribution, community composition, and productivity of key benthic primary producers, potentially reducing habitat and energy provision to coastal food webs. We compared the underwater light environment of macroalgal dominated shallow subtidal rocky reef habitats on a coastline modified by human activities with a coastline of forested catchments. Key metrics describing the availability of photosynthetically active radiation (PAR) were determined over 295 days and were related to macroalgal depth distribution, community composition, and standing biomass patterns, which were recorded seasonally. Light attenuation was more than twice as high in shallow subtidal zones along the modified coast. Macroalgal biomass was 2–5 times greater within forested sites, and even in shallow water (2m) a significant difference in biomass was observed. Long-term light dose provided the best explanation for differences in observed biomass between modified and forested coasts, with light availability over the study period differing by 60 and 90 mol photons m−2 at 2 and 10 metres, respectively. Higher biomass on the forested coast was driven by the presence of larger individuals rather than species diversity or density. This study suggests that commonly used metrics such as species diversity and density are not as sensitive as direct measures of biomass when detecting the effects of light limitation within macroalgal communities. PMID:25902185

Structure and function of nematode communities across the Indian western continental margin and its oxygen minimum zone

NASA Astrophysics Data System (ADS)

Singh, R.; Ingole, B. S.

2016-01-01

We studied patterns of nematode distribution along the western Indian continental margin to determine the influence of habitat heterogeneity and low oxygen levels on the community's taxonomic and functional structure. A single transect, perpendicular to the coast at 14° N latitude was sampled from 34 to 2546 m depth for biological and environmental variables during August 2007. The oxygen minimum zone extended from 102 to 1001 m. Nematodes (described and undescribed) were identified to species and classified according to biological and functional traits. A total of 110 nematode species belonging to 24 families were found along the transect. Three depth zones were identified: the shelf (depth range: 34-102 m; highest nematode mean density: 176.6 ± 37 ind 10 cm-2), the slope (525-1524 m; 124.3 ± 16 ind 10 cm-2), and the basin (2001-2546 m; 62.9 ± 2 ind 10 cm-2). Across the entire study area, the dominant species were Terschellingia longicaudata, Desmodora sp. 1, Sphaerolaimus gracilis, and Theristus ensifer; their maximum density was at shelf stations. Nematode communities in different zones differed in species composition. Chromadorita sp. 2 (2.78 %) and Sphaerolaimus gracilis (2.21 %) were dominant on the shelf, whereas Terschellingia longicaudata (4.73 %) and Desmodora sp. 1 (4.42 %) were dominant on the slope, but in the basin, Halalaimus sp. 1(1.11 %) and Acantholaimus elegans (1.11 %) were dominant. The information in a particular functional group was not a simple reflection of the information in species abundance. Ecological information captured by adult length, adult shape, and life-history strategy was less site-specific and thus differed notably from information contained in other taxonomic groups. The functional composition of nematodes was strongly linked to the organic-carbon and dissolved-oxygen concentration. Seven species were found exclusively in the oxygen minimum zone: Pselionema sp. 1, Choanolaimus sp. 2, Halichoanolaimus sp. 1, Cobbia dentata, Daptonema sp. 1, Trissonchulus sp. 1, and Minolaimus sp. 1. Correlation with a number of environmental variables indicated that food quantity (measured as the organic-carbon content and chlorophyll content) and oxygen level were the major factors that influenced nematode community structure and function.

Chemical Evolution of a Protoplanetary Disk

NASA Astrophysics Data System (ADS)

Semenov, Dmitry A.

2011-12-01

In this paper we review recent progress in our understanding of the chemical evolution of protoplanetary disks. Current observational constraints and theoretical modeling on the chemical composition of gas and dust in these systems are presented. Strong variations of temperature, density, high-energy radiation intensities in these disks, both radially and vertically, result in a peculiar disk chemical structure, where a variety of processes are active. In hot, dilute and heavily irradiated atmosphere only the most photostable simple radicals and atoms and atomic ions exist, formed by gas-phase processes. Beneath the atmosphere a partly UV-shielded, warm molecular layer is located, where high-energy radiation drives rich ion-molecule and radical-radical chemistry, both in the gas phase and on dust surfaces. In a cold, dense, dark disk midplane many molecules are frozen out, forming thick icy mantles where surface chemistry is active and where complex polyatomic (organic) species are synthesized. Dynamical processes affect disk chemical composition by enriching it in abundances of complex species produced via slow surface processes, which will become detectable with ALMA.

Microbial Adhesion and Biofilm Formation on Microfiltration Membranes: A Detailed Characterization Using Model Organisms with Increasing Complexity

PubMed Central

Vanysacker, L.; Denis, C.; Declerck, P.; Piasecka, A.; Vankelecom, I. F. J.

2013-01-01

Since many years, membrane biofouling has been described as the Achilles heel of membrane fouling. In the present study, an ecological assay was performed using model systems with increasing complexity: a monospecies assay using Pseudomonas aeruginosa or Escherichia coli separately, a duospecies assay using both microorganisms, and a multispecies assay using activated sludge with or without spiked P. aeruginosa. The microbial adhesion and biofilm formation were evaluated in terms of bacterial cell densities, species richness, and bacterial community composition on polyvinyldifluoride, polyethylene, and polysulfone membranes. The data show that biofouling formation was strongly influenced by the kind of microorganism, the interactions between the organisms, and the changes in environmental conditions whereas the membrane effect was less important. The findings obtained in this study suggest that more knowledge in species composition and microbial interactions is needed in order to understand the complex biofouling process. This is the first report describing the microbial interactions with a membrane during the biofouling development. PMID:23986906

Top predators affect the composition of naive protist communities, but only in their early-successional stage.

PubMed

Zander, Axel; Gravel, Dominique; Bersier, Louis-Félix; Gray, Sarah M

2016-02-01

Introduced top predators have the potential to disrupt community dynamics when prey species are naive to predation. The impact of introduced predators may also vary depending on the stage of community development. Early-succession communities are likely to have small-bodied and fast-growing species, but are not necessarily good at defending against predators. In contrast, late-succession communities are typically composed of larger-bodied species that are more predator resistant relative to small-bodied species. Yet, these aspects are greatly neglected in invasion studies. We therefore tested the effect of top predator presence on early- and late-succession communities that were either naive or non-naive to top predators. We used the aquatic community held within the leaves of Sarracenia purpurea. In North America, communities have experienced the S. purpurea top predator and are therefore non-naive. In Europe, this predator is not present and its niche has not been filled, making these communities top-predator naive. We collected early- and late-succession communities from two non-naive and two naive sites, which are climatically similar. We then conducted a common-garden experiment, with and without the presence of the top predator, in which we recorded changes in community composition, body size spectra, bacterial density, and respiration. We found that the top predator had no statistical effect on global measures of community structure and functioning. However, it significantly altered protist composition, but only in naive, early-succession communities, highlighting that the state of community development is important for understanding the impact of invasion.

[Seasonal dynamics and vertical distribution pattern of bud bank in different erosion environments on hilly-gully Loess Plateau of Northwest China].

PubMed

Du, Hua-Dong; Jiao, Ju-Ying; Kou, Meng; Wang, Ning

2013-05-01

This paper studied the vegetation composition, bud composition, and the seasonal dynamics and vertical distribution pattern of bud bank in five erosion environments (sunny gully slope, sunny hilly slope, hilltop, shady hilly slope, and shady gully slope) on the hilly-gully Loess Plateau of North Shaanxi. In the study area, the perennial species with perennial bud bank accounted for 80.3% of the total species, while the annual species with seasonal bud bank took up 19.7% of the total. In vegetation turning-green season, there was a relatively large perennial bud bank stock on the sunny hilly-gully slope where serious erosion occurred, while seasonal bud bank showed a higher bud bank density in blossom and fruit-setting season on the hilltop and two shady slopes where soil erosion intensity was relatively gentle. The proportion of underground bud bank to total perennial bud bank in different erosion environments was relatively stable. On the land surface, the perennial bud bank stock was larger on the sunny slope where the soil disturbance often occurred, whereas the seasonal bud bank stock was larger on the shady slope and hilltop. Due to the different species composition of plant communities in different erosion environments, in addition to the disturbance of soil erosion and the seasonal plant regeneration, the seasonal dynamics and vertical distribution pattern of bud bank changed. It was suggested that bud bank played an important role in the vegetation regeneration after the disturbance of soil erosion on the hilly-gully Loess Plateau of North Shaanxi.

Sampling in rugged terrain

USGS Publications Warehouse

Dawson, D.K.; Ralph, C. John; Scott, J. Michael

1981-01-01

Work in rugged terrain poses some unique problems that should be considered before research is initiated. Besides the obvious physical difficulties of crossing uneven terrain, topography can influence the bird species? composition of a forest and the observer's ability to detect birds and estimate distances. Census results can also be affected by the slower rate of travel on rugged terrain. Density figures may be higher than results obtained from censuses in similar habitat on level terrain because of the greater likelihood of double-recording of individuals and of recording species that sing infrequently. In selecting a census technique, the researcher should weigh the efficiency and applicability of a technique for the objectives of his study in light of the added difficulties posed by rugged terrain. The variable circular-plot method is probably the most effective technique for estimating bird numbers. Bird counts and distance estimates are facilitated because the observer is stationary, and calculations of species? densities take into account differences in effective area covered amongst stations due to variability in terrain or vegetation structure. Institution of precautions that minimize the risk of injury to field personnel can often enhance the observer?s ability to detect birds.

Self-assembled Li 3V 2(PO 4) 3/reduced graphene oxide multilayer composite prepared by sequential adsorption

DOE PAGES

Kim, Myeong-Seong; Bak, Seong-Min; Lee, Suk-Woo; ...

2017-09-26

Here in this paper, we report on Li 3V 2(PO 4) 3 (LVP)/reduced graphene oxide (rGO) multilayer composites prepared via a sequential adsorption method and subsequent heat treatment, and their use as cathodes for high-rate lithium-ion batteries. The sequential adsorption process includes adsorbing oppositely charged components of anionic inorganic species and cationic head of a surfactant adsorbed to graphite oxide sheets, which is a key step in the fabrication of the LVP/rGO multilayer composites. The multilayer structure has open channels between the highly conductive rGO layers while achieving a relatively high tap density, which could effectively improve the rate capability.more » Consequently, the LVP/rGO multilayer composites exhibit a high tap density (0.6 g cm -3) and good electrochemical properties. Specifically, in the voltage range of 3.0–4.3 V, the composite exhibits a specific capacity of 131 mAh g -1 at 0.1C, a good rate capabilities (88% capacity retention at 60C), and long cycling performance (97% capacity retention after 500 cycles at 10C). Moreover, in the extended voltage range of 3.0–4.8 V, it exhibits a high specific capacity of 185 mAh g -1 at 0.2C, a good rate capability (66% capacity retention at 30C), and stable cycling performance (96% capacity retention after 500 cycles at 10C).« less

Self-assembled Li 3V 2(PO 4) 3/reduced graphene oxide multilayer composite prepared by sequential adsorption

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kim, Myeong-Seong; Bak, Seong-Min; Lee, Suk-Woo

Here in this paper, we report on Li 3V 2(PO 4) 3 (LVP)/reduced graphene oxide (rGO) multilayer composites prepared via a sequential adsorption method and subsequent heat treatment, and their use as cathodes for high-rate lithium-ion batteries. The sequential adsorption process includes adsorbing oppositely charged components of anionic inorganic species and cationic head of a surfactant adsorbed to graphite oxide sheets, which is a key step in the fabrication of the LVP/rGO multilayer composites. The multilayer structure has open channels between the highly conductive rGO layers while achieving a relatively high tap density, which could effectively improve the rate capability.more » Consequently, the LVP/rGO multilayer composites exhibit a high tap density (0.6 g cm -3) and good electrochemical properties. Specifically, in the voltage range of 3.0–4.3 V, the composite exhibits a specific capacity of 131 mAh g -1 at 0.1C, a good rate capabilities (88% capacity retention at 60C), and long cycling performance (97% capacity retention after 500 cycles at 10C). Moreover, in the extended voltage range of 3.0–4.8 V, it exhibits a high specific capacity of 185 mAh g -1 at 0.2C, a good rate capability (66% capacity retention at 30C), and stable cycling performance (96% capacity retention after 500 cycles at 10C).« less

Latitudinal variation of leaf stomatal traits from species to community level in forests: linkage with ecosystem productivity

PubMed Central

Wang, Ruili; Yu, Guirui; He, Nianpeng; Wang, Qiufeng; Zhao, Ning; Xu, Zhiwei; Ge, Jianping

2015-01-01

To explore the latitudinal variation of stomatal traits from species to community level and their linkage with net primary productivity (NPP), we investigated leaf stomatal density (SDL) and stomatal length (SLL) across 760 species from nine forest ecosystems in eastern China, and calculated the community-level SD (SDC) and SL (SLC) through species-specific leaf area index (LAI). Our results showed that latitudinal variation in species-level SDL and SLL was minimal, but community-level SDC and SLC decreased clearly with increasing latitude. The relationship between SD and SL was negative across species and different plant functional types (PFTs), but positive at the community level. Furthermore, community-level SDC correlated positively with forest NPP, and explained 51% of the variation in NPP. These findings indicate that the trade-off by regulating SDL and SLL may be an important strategy for plant individuals to adapt to environmental changes, and temperature acts as the main factor influencing community-level stomatal traits through alteration of species composition. Importantly, our findings provide new insight into the relationship between plant traits and ecosystem function. PMID:26403303

Association between nighttime artificial light pollution and sea turtle nest density along Florida coast: A geospatial study using VIIRS remote sensing data.

PubMed

Hu, Zhiyong; Hu, Hongda; Huang, Yuxia

2018-08-01

Artificial lighting at night has becoming a new type of pollution posing an important anthropogenic environmental pressure on organisms. The objective of this research was to examine the potential association between nighttime artificial light pollution and nest densities of the three main sea turtle species along Florida beaches, including green turtles, loggerheads, and leatherbacks. Sea turtle survey data was obtained from the "Florida Statewide Nesting Beach Survey program". We used the new generation of satellite sensor "Visible Infrared Imaging Radiometer Suite (VIIRS)" (version 1 D/N Band) nighttime annual average radiance composite image data. We defined light pollution as artificial light brightness greater than 10% of the natural sky brightness above 45° of elevation (>1.14 × 10 -11 Wm -2 sr -1 ). We fitted a generalized linear model (GLM), a GLM with eigenvectors spatial filtering (GLM-ESF), and a generalized estimating equations (GEE) approach for each species to examine the potential correlation of nest density with light pollution. Our models are robust and reliable in terms of the ability to deal with data distribution and spatial autocorrelation (SA) issues violating model assumptions. All three models found that nest density is significantly negatively correlated with light pollution for each sea turtle species: the higher light pollution, the lower nest density. The two spatially extended models (GLM-ESF and GEE) show that light pollution influences nest density in a descending order from green turtles, to loggerheads, and then to leatherbacks. The research findings have an implication for sea turtle conservation policy and ordinance making. Near-coastal lights-out ordinances and other approaches to shield lights can protect sea turtles and their nests. The VIIRS DNB light data, having significant improvements over comparable data by its predecessor, the DMSP-OLS, shows promise for continued and improved research about ecological effects of artificial light pollution. Copyright © 2018 Elsevier Ltd. All rights reserved.

Breakdown of Phylogenetic Signal: A Survey of Microsatellite Densities in 454 Shotgun Sequences from 154 Non Model Eukaryote Species

PubMed Central

Meglécz, Emese; Nève, Gabriel; Biffin, Ed; Gardner, Michael G.

2012-01-01

Microsatellites are ubiquitous in Eukaryotic genomes. A more complete understanding of their origin and spread can be gained from a comparison of their distribution within a phylogenetic context. Although information for model species is accumulating rapidly, it is insufficient due to a lack of species depth, thus intragroup variation is necessarily ignored. As such, apparent differences between groups may be overinflated and generalizations cannot be inferred until an analysis of the variation that exists within groups has been conducted. In this study, we examined microsatellite coverage and motif patterns from 454 shotgun sequences of 154 Eukaryote species from eight distantly related phyla (Cnidaria, Arthropoda, Onychophora, Bryozoa, Mollusca, Echinodermata, Chordata and Streptophyta) to test if a consistent phylogenetic pattern emerges from the microsatellite composition of these species. It is clear from our results that data from model species provide incomplete information regarding the existing microsatellite variability within the Eukaryotes. A very strong heterogeneity of microsatellite composition was found within most phyla, classes and even orders. Autocorrelation analyses indicated that while microsatellite contents of species within clades more recent than 200 Mya tend to be similar, the autocorrelation breaks down and becomes negative or non-significant with increasing divergence time. Therefore, the age of the taxon seems to be a primary factor in degrading the phylogenetic pattern present among related groups. The most recent classes or orders of Chordates still retain the pattern of their common ancestor. However, within older groups, such as classes of Arthropods, the phylogenetic pattern has been scrambled by the long independent evolution of the lineages. PMID:22815847

Biodiversity decreases disease through predictable changes in host community competence.

PubMed

Johnson, Pieter T J; Preston, Daniel L; Hoverman, Jason T; Richgels, Katherine L D

2013-02-14

Accelerating rates of species extinctions and disease emergence underscore the importance of understanding how changes in biodiversity affect disease outcomes. Over the past decade, a growing number of studies have reported negative correlations between host biodiversity and disease risk, prompting suggestions that biodiversity conservation could promote human and wildlife health. Yet the generality of the diversity-disease linkage remains conjectural, in part because empirical evidence of a relationship between host competence (the ability to maintain and transmit infections) and the order in which communities assemble has proven elusive. Here we integrate high-resolution field data with multi-scale experiments to show that host diversity inhibits transmission of the virulent pathogen Ribeiroia ondatrae and reduces amphibian disease as a result of consistent linkages among species richness, host composition and community competence. Surveys of 345 wetlands indicated that community composition changed nonrandomly with species richness, such that highly competent hosts dominated in species-poor assemblages whereas more resistant species became progressively more common in diverse assemblages. As a result, amphibian species richness strongly moderated pathogen transmission and disease pathology among 24,215 examined hosts, with a 78.4% decline in realized transmission in richer assemblages. Laboratory and mesocosm manipulations revealed an approximately 50% decrease in pathogen transmission and host pathology across a realistic diversity gradient while controlling for host density, helping to establish mechanisms underlying the diversity-disease relationship and their consequences for host fitness. By revealing a consistent link between species richness and community competence, these findings highlight the influence of biodiversity on infection risk and emphasize the benefit of a community-based approach to understanding infectious diseases.

Effects of fire on composition, biomass, and nutrients in oak scrub vegetation on John F. Kennedy Space Center, Florida

NASA Technical Reports Server (NTRS)

Schmalzer, Paul A.; Hinkle, C. Ross

1987-01-01

Four stands of oak scrub two, four, eight, and 25 years since fire were sampled with permanent 15 m line transects. Percent cover by species was determined. Plant samples were analyzed for a variety of substances. Transects were resurveyed in 1985 for vegetation parameters. Nutrient pools in biomass were calculated from biomass data and tissue nutrient concentrations. Soil nutrient pools were calculated from nutrient concentrations and bulk density. Species distribution and soil chemical properties were found to be closely related to water table depth. The following fire-related conclusions are reached: (1) major structural changes occur in scrub after fire in that shrub height is reduced and requires four to six years to exceed 1 m; (2) reduction in shrub height affects the suitability of scrub for the Florida scrub jay (3) live biomass increases with time since fire; (4) nutrient concentrations in live biomass do not change with time since fire; (5) species composition and richness are little changed after fire; and (6) imposition of a continued regime of burning on a three-year cycle may have adverse impacts not indicated by the recovery of scrub from a single fire.