Sample records for density tiling microarrays

  1. An efficient pseudomedian filter for tiling microrrays.

    PubMed

    Royce, Thomas E; Carriero, Nicholas J; Gerstein, Mark B

    2007-06-07

    Tiling microarrays are becoming an essential technology in the functional genomics toolbox. They have been applied to the tasks of novel transcript identification, elucidation of transcription factor binding sites, detection of methylated DNA and several other applications in several model organisms. These experiments are being conducted at increasingly finer resolutions as the microarray technology enjoys increasingly greater feature densities. The increased densities naturally lead to increased data analysis requirements. Specifically, the most widely employed algorithm for tiling array analysis involves smoothing observed signals by computing pseudomedians within sliding windows, a O(n2logn) calculation in each window. This poor time complexity is an issue for tiling array analysis and could prove to be a real bottleneck as tiling microarray experiments become grander in scope and finer in resolution. We therefore implemented Monahan's HLQEST algorithm that reduces the runtime complexity for computing the pseudomedian of n numbers to O(nlogn) from O(n2logn). For a representative tiling microarray dataset, this modification reduced the smoothing procedure's runtime by nearly 90%. We then leveraged the fact that elements within sliding windows remain largely unchanged in overlapping windows (as one slides across genomic space) to further reduce computation by an additional 43%. This was achieved by the application of skip lists to maintaining a sorted list of values from window to window. This sorted list could be maintained with simple O(log n) inserts and deletes. We illustrate the favorable scaling properties of our algorithms with both time complexity analysis and benchmarking on synthetic datasets. Tiling microarray analyses that rely upon a sliding window pseudomedian calculation can require many hours of computation. We have eased this requirement significantly by implementing efficient algorithms that scale well with genomic feature density. This result not only speeds the current standard analyses, but also makes possible ones where many iterations of the filter may be required, such as might be required in a bootstrap or parameter estimation setting. Source code and executables are available at http://tiling.gersteinlab.org/pseudomedian/.

  2. An efficient pseudomedian filter for tiling microrrays

    PubMed Central

    Royce, Thomas E; Carriero, Nicholas J; Gerstein, Mark B

    2007-01-01

    Background Tiling microarrays are becoming an essential technology in the functional genomics toolbox. They have been applied to the tasks of novel transcript identification, elucidation of transcription factor binding sites, detection of methylated DNA and several other applications in several model organisms. These experiments are being conducted at increasingly finer resolutions as the microarray technology enjoys increasingly greater feature densities. The increased densities naturally lead to increased data analysis requirements. Specifically, the most widely employed algorithm for tiling array analysis involves smoothing observed signals by computing pseudomedians within sliding windows, a O(n2logn) calculation in each window. This poor time complexity is an issue for tiling array analysis and could prove to be a real bottleneck as tiling microarray experiments become grander in scope and finer in resolution. Results We therefore implemented Monahan's HLQEST algorithm that reduces the runtime complexity for computing the pseudomedian of n numbers to O(nlogn) from O(n2logn). For a representative tiling microarray dataset, this modification reduced the smoothing procedure's runtime by nearly 90%. We then leveraged the fact that elements within sliding windows remain largely unchanged in overlapping windows (as one slides across genomic space) to further reduce computation by an additional 43%. This was achieved by the application of skip lists to maintaining a sorted list of values from window to window. This sorted list could be maintained with simple O(log n) inserts and deletes. We illustrate the favorable scaling properties of our algorithms with both time complexity analysis and benchmarking on synthetic datasets. Conclusion Tiling microarray analyses that rely upon a sliding window pseudomedian calculation can require many hours of computation. We have eased this requirement significantly by implementing efficient algorithms that scale well with genomic feature density. This result not only speeds the current standard analyses, but also makes possible ones where many iterations of the filter may be required, such as might be required in a bootstrap or parameter estimation setting. Source code and executables are available at . PMID:17555595

  3. Thermodynamically optimal whole-genome tiling microarray design and validation.

    PubMed

    Cho, Hyejin; Chou, Hui-Hsien

    2016-06-13

    Microarray is an efficient apparatus to interrogate the whole transcriptome of species. Microarray can be designed according to annotated gene sets, but the resulted microarrays cannot be used to identify novel transcripts and this design method is not applicable to unannotated species. Alternatively, a whole-genome tiling microarray can be designed using only genomic sequences without gene annotations, and it can be used to detect novel RNA transcripts as well as known genes. The difficulty with tiling microarray design lies in the tradeoff between probe-specificity and coverage of the genome. Sequence comparison methods based on BLAST or similar software are commonly employed in microarray design, but they cannot precisely determine the subtle thermodynamic competition between probe targets and partially matched probe nontargets during hybridizations. Using the whole-genome thermodynamic analysis software PICKY to design tiling microarrays, we can achieve maximum whole-genome coverage allowable under the thermodynamic constraints of each target genome. The resulted tiling microarrays are thermodynamically optimal in the sense that all selected probes share the same melting temperature separation range between their targets and closest nontargets, and no additional probes can be added without violating the specificity of the microarray to the target genome. This new design method was used to create two whole-genome tiling microarrays for Escherichia coli MG1655 and Agrobacterium tumefaciens C58 and the experiment results validated the design.

  4. Issues in the analysis of oligonucleotide tiling microarrays for transcript mapping

    NASA Technical Reports Server (NTRS)

    Royce, Thomas E.; Rozowsky, Joel S.; Bertone, Paul; Samanta, Manoj; Stolc, Viktor; Weissman, Sherman; Snyder, Michael; Gerstein, Mark

    2005-01-01

    Traditional microarrays use probes complementary to known genes to quantitate the differential gene expression between two or more conditions. Genomic tiling microarray experiments differ in that probes that span a genomic region at regular intervals are used to detect the presence or absence of transcription. This difference means the same sets of biases and the methods for addressing them are unlikely to be relevant to both types of experiment. We introduce the informatics challenges arising in the analysis of tiling microarray experiments as open problems to the scientific community and present initial approaches for the analysis of this nascent technology.

  5. Strand-specific transcriptome profiling with directly labeled RNA on genomic tiling microarrays

    PubMed Central

    2011-01-01

    Background With lower manufacturing cost, high spot density, and flexible probe design, genomic tiling microarrays are ideal for comprehensive transcriptome studies. Typically, transcriptome profiling using microarrays involves reverse transcription, which converts RNA to cDNA. The cDNA is then labeled and hybridized to the probes on the arrays, thus the RNA signals are detected indirectly. Reverse transcription is known to generate artifactual cDNA, in particular the synthesis of second-strand cDNA, leading to false discovery of antisense RNA. To address this issue, we have developed an effective method using RNA that is directly labeled, thus by-passing the cDNA generation. This paper describes this method and its application to the mapping of transcriptome profiles. Results RNA extracted from laboratory cultures of Porphyromonas gingivalis was fluorescently labeled with an alkylation reagent and hybridized directly to probes on genomic tiling microarrays specifically designed for this periodontal pathogen. The generated transcriptome profile was strand-specific and produced signals close to background level in most antisense regions of the genome. In contrast, high levels of signal were detected in the antisense regions when the hybridization was done with cDNA. Five antisense areas were tested with independent strand-specific RT-PCR and none to negligible amplification was detected, indicating that the strong antisense cDNA signals were experimental artifacts. Conclusions An efficient method was developed for mapping transcriptome profiles specific to both coding strands of a bacterial genome. This method chemically labels and uses extracted RNA directly in microarray hybridization. The generated transcriptome profile was free of cDNA artifactual signals. In addition, this method requires fewer processing steps and is potentially more sensitive in detecting small amount of RNA compared to conventional end-labeling methods due to the incorporation of more fluorescent molecules per RNA fragment. PMID:21235785

  6. Analysis of Protein-DNA Interaction by Chromatin Immunoprecipitation and DNA Tiling Microarray (ChIP-on-chip).

    PubMed

    Gao, Hui; Zhao, Chunyan

    2018-01-01

    Chromatin immunoprecipitation (ChIP) has become the most effective and widely used tool to study the interactions between specific proteins or modified forms of proteins and a genomic DNA region. Combined with genome-wide profiling technologies, such as microarray hybridization (ChIP-on-chip) or massively parallel sequencing (ChIP-seq), ChIP could provide a genome-wide mapping of in vivo protein-DNA interactions in various organisms. Here, we describe a protocol of ChIP-on-chip that uses tiling microarray to obtain a genome-wide profiling of ChIPed DNA.

  7. Tiled Microarray Identification of Novel Viral Transcript Structures and Distinct Transcriptional Profiles during Two Modes of Productive Murine Gammaherpesvirus 68 Infection

    PubMed Central

    Cheng, Benson Yee Hin; Zhi, Jizu; Santana, Alexis; Khan, Sohail; Salinas, Eduardo; Forrest, J. Craig; Zheng, Yueting; Jaggi, Shirin; Leatherwood, Janet

    2012-01-01

    We applied a custom tiled microarray to examine murine gammaherpesvirus 68 (MHV68) polyadenylated transcript expression in a time course of de novo infection of fibroblast cells and following phorbol ester-mediated reactivation from a latently infected B cell line. During de novo infection, all open reading frames (ORFs) were transcribed and clustered into four major temporal groups that were overlapping yet distinct from clusters based on the phorbol ester-stimulated B cell reactivation time course. High-density transcript analysis at 2-h intervals during de novo infection mapped gene boundaries with a 20-nucleotide resolution, including a previously undefined ORF73 transcript and the MHV68 ORF63 homolog of Kaposi's sarcoma-associated herpesvirus vNLRP1. ORF6 transcript initiation was mapped by tiled array and confirmed by 5′ rapid amplification of cDNA ends. The ∼1.3-kb region upstream of ORF6 was responsive to lytic infection and MHV68 RTA, identifying a novel RTA-responsive promoter. Transcription in intergenic regions consistent with the previously defined expressed genomic regions was detected during both types of productive infection. We conclude that the MHV68 transcriptome is dynamic and distinct during de novo fibroblast infection and upon phorbol ester-stimulated B cell reactivation, highlighting the need to evaluate further transcript structure and the context-dependent molecular events that govern viral gene expression during chronic infection. PMID:22318145

  8. A comprehensive transcript index of the human genome generated using microarrays and computational approaches

    PubMed Central

    Schadt, Eric E; Edwards, Stephen W; GuhaThakurta, Debraj; Holder, Dan; Ying, Lisa; Svetnik, Vladimir; Leonardson, Amy; Hart, Kyle W; Russell, Archie; Li, Guoya; Cavet, Guy; Castle, John; McDonagh, Paul; Kan, Zhengyan; Chen, Ronghua; Kasarskis, Andrew; Margarint, Mihai; Caceres, Ramon M; Johnson, Jason M; Armour, Christopher D; Garrett-Engele, Philip W; Tsinoremas, Nicholas F; Shoemaker, Daniel D

    2004-01-01

    Background Computational and microarray-based experimental approaches were used to generate a comprehensive transcript index for the human genome. Oligonucleotide probes designed from approximately 50,000 known and predicted transcript sequences from the human genome were used to survey transcription from a diverse set of 60 tissues and cell lines using ink-jet microarrays. Further, expression activity over at least six conditions was more generally assessed using genomic tiling arrays consisting of probes tiled through a repeat-masked version of the genomic sequence making up chromosomes 20 and 22. Results The combination of microarray data with extensive genome annotations resulted in a set of 28,456 experimentally supported transcripts. This set of high-confidence transcripts represents the first experimentally driven annotation of the human genome. In addition, the results from genomic tiling suggest that a large amount of transcription exists outside of annotated regions of the genome and serves as an example of how this activity could be measured on a genome-wide scale. Conclusions These data represent one of the most comprehensive assessments of transcriptional activity in the human genome and provide an atlas of human gene expression over a unique set of gene predictions. Before the annotation of the human genome is considered complete, however, the previously unannotated transcriptional activity throughout the genome must be fully characterized. PMID:15461792

  9. The GermOnline cross-species systems browser provides comprehensive information on genes and gene products relevant for sexual reproduction.

    PubMed

    Gattiker, Alexandre; Niederhauser-Wiederkehr, Christa; Moore, James; Hermida, Leandro; Primig, Michael

    2007-01-01

    We report a novel release of the GermOnline knowledgebase covering genes relevant for the cell cycle, gametogenesis and fertility. GermOnline was extended into a cross-species systems browser including information on DNA sequence annotation, gene expression and the function of gene products. The database covers eight model organisms and Homo sapiens, for which complete genome annotation data are available. The database is now built around a sophisticated genome browser (Ensembl), our own microarray information management and annotation system (MIMAS) used to extensively describe experimental data obtained with high-density oligonucleotide microarrays (GeneChips) and a comprehensive system for online editing of database entries (MediaWiki). The RNA data include results from classical microarrays as well as tiling arrays that yield information on RNA expression levels, transcript start sites and lengths as well as exon composition. Members of the research community are solicited to help GermOnline curators keep database entries on genes and gene products complete and accurate. The database is accessible at http://www.germonline.org/.

  10. Resequencing Pathogen Microarray (RPM) for prospective detection and identification of emergent pathogen strains and variants

    NASA Astrophysics Data System (ADS)

    Tibbetts, Clark; Lichanska, Agnieszka M.; Borsuk, Lisa A.; Weslowski, Brian; Morris, Leah M.; Lorence, Matthew C.; Schafer, Klaus O.; Campos, Joseph; Sene, Mohamadou; Myers, Christopher A.; Faix, Dennis; Blair, Patrick J.; Brown, Jason; Metzgar, David

    2010-04-01

    High-density resequencing microarrays support simultaneous detection and identification of multiple viral and bacterial pathogens. Because detection and identification using RPM is based upon multiple specimen-specific target pathogen gene sequences generated in the individual test, the test results enable both a differential diagnostic analysis and epidemiological tracking of detected pathogen strains and variants from one specimen to the next. The RPM assay enables detection and identification of pathogen sequences that share as little as 80% sequence similarity to prototype target gene sequences represented as detector tiles on the array. This capability enables the RPM to detect and identify previously unknown strains and variants of a detected pathogen, as in sentinel cases associated with an infectious disease outbreak. We illustrate this capability using assay results from testing influenza A virus vaccines configured with strains that were first defined years after the design of the RPM microarray. Results are also presented from RPM-Flu testing of three specimens independently confirmed to the positive for the 2009 Novel H1N1 outbreak strain of influenza virus.

  11. Low-Density, Aerogel-Filled Thermal-Insulation Tiles

    NASA Technical Reports Server (NTRS)

    Santos, Maryann; Heng, Vann; Barney, Andrea; Oka, Kris; Droege, Michael

    2005-01-01

    Aerogel fillings have been investigated in a continuing effort to develop low-density thermal-insulation tiles that, relative to prior such tiles, have greater dimensional stability (especially less shrinkage), equal or lower thermal conductivity, and greater strength and durability. In preparation for laboratory tests of dimensional and thermal stability, prototypes of aerogel-filled versions of recently developed low-density tiles have been fabricated by impregnating such tiles to various depths with aerogel formations ranging in density from 1.5 to 5.6 lb/ft3 (about 53 to 200 kg/cu m). Results available at the time of reporting the information for this article showed that the thermal-insulation properties of the partially or fully aerogel- impregnated tiles were equivalent or superior to those of the corresponding non-impregnated tiles and that the partially impregnated tiles exhibited minimal (<1.5 percent) shrinkage after multiple exposures at a temperature of 2,300 F (1,260 C). Latest developments have shown that tiles containing aerogels at the higher end of the density range are stable after multiple exposures at the said temperature.

  12. Orbiter thermal pressure drop characteristics for shuttle orbiter thermal protection system components: High density tile, low density tile, densified low density tile, and strain isolation pad

    NASA Technical Reports Server (NTRS)

    Lawing, P. L.; Nystrom, D. M.

    1980-01-01

    Pressure drop tests were conducted on available samples of low and high density tile, densified low density tile, and strain isolation pads. The results are presented in terms of pressure drop, material thickness and volume flow rate. Although the test apparatus was only capable of a small part of the range of conditions to be encountered in a Shuttle Orbiter flight, the data serve to determine the type of flow characteristics to be expected for each material type tested; the measured quantities also should serve as input for initial venting and flow through analysis.

  13. GermOnline 4.0 is a genomics gateway for germline development, meiosis and the mitotic cell cycle.

    PubMed

    Lardenois, Aurélie; Gattiker, Alexandre; Collin, Olivier; Chalmel, Frédéric; Primig, Michael

    2010-01-01

    GermOnline 4.0 is a cross-species database portal focusing on high-throughput expression data relevant for germline development, the meiotic cell cycle and mitosis in healthy versus malignant cells. It is thus a source of information for life scientists as well as clinicians who are interested in gene expression and regulatory networks. The GermOnline gateway provides unlimited access to information produced with high-density oligonucleotide microarrays (3'-UTR GeneChips), genome-wide protein-DNA binding assays and protein-protein interaction studies in the context of Ensembl genome annotation. Samples used to produce high-throughput expression data and to carry out genome-wide in vivo DNA binding assays are annotated via the MIAME-compliant Multiomics Information Management and Annotation System (MIMAS 3.0). Furthermore, the Saccharomyces Genomics Viewer (SGV) was developed and integrated into the gateway. SGV is a visualization tool that outputs genome annotation and DNA-strand specific expression data produced with high-density oligonucleotide tiling microarrays (Sc_tlg GeneChips) which cover the complete budding yeast genome on both DNA strands. It facilitates the interpretation of expression levels and transcript structures determined for various cell types cultured under different growth and differentiation conditions. Database URL: www.germonline.org/

  14. GermOnline 4.0 is a genomics gateway for germline development, meiosis and the mitotic cell cycle

    PubMed Central

    Lardenois, Aurélie; Gattiker, Alexandre; Collin, Olivier; Chalmel, Frédéric; Primig, Michael

    2010-01-01

    GermOnline 4.0 is a cross-species database portal focusing on high-throughput expression data relevant for germline development, the meiotic cell cycle and mitosis in healthy versus malignant cells. It is thus a source of information for life scientists as well as clinicians who are interested in gene expression and regulatory networks. The GermOnline gateway provides unlimited access to information produced with high-density oligonucleotide microarrays (3′-UTR GeneChips), genome-wide protein–DNA binding assays and protein–protein interaction studies in the context of Ensembl genome annotation. Samples used to produce high-throughput expression data and to carry out genome-wide in vivo DNA binding assays are annotated via the MIAME-compliant Multiomics Information Management and Annotation System (MIMAS 3.0). Furthermore, the Saccharomyces Genomics Viewer (SGV) was developed and integrated into the gateway. SGV is a visualization tool that outputs genome annotation and DNA-strand specific expression data produced with high-density oligonucleotide tiling microarrays (Sc_tlg GeneChips) which cover the complete budding yeast genome on both DNA strands. It facilitates the interpretation of expression levels and transcript structures determined for various cell types cultured under different growth and differentiation conditions. Database URL: www.germonline.org/ PMID:21149299

  15. Restriction Site Tiling Analysis: accurate discovery and quantitative genotyping of genome-wide polymorphisms using nucleotide arrays

    PubMed Central

    2010-01-01

    High-throughput genotype data can be used to identify genes important for local adaptation in wild populations, phenotypes in lab stocks, or disease-related traits in human medicine. Here we advance microarray-based genotyping for population genomics with Restriction Site Tiling Analysis. The approach simultaneously discovers polymorphisms and provides quantitative genotype data at 10,000s of loci. It is highly accurate and free from ascertainment bias. We apply the approach to uncover genomic differentiation in the purple sea urchin. PMID:20403197

  16. Diagnosis of Zika Virus Infection by Peptide Array and Enzyme-Linked Immunosorbent Assay.

    PubMed

    Mishra, Nischay; Caciula, Adrian; Price, Adam; Thakkar, Riddhi; Ng, James; Chauhan, Lokendra V; Jain, Komal; Che, Xiaoyu; Espinosa, Diego A; Montoya Cruz, Magelda; Balmaseda, Angel; Sullivan, Eric H; Patel, Jigar J; Jarman, Richard G; Rakeman, Jennifer L; Egan, Christina T; Reusken, Chantal B E M; Koopmans, Marion P G; Harris, Eva; Tokarz, Rafal; Briese, Thomas; Lipkin, W Ian

    2018-03-06

    Zika virus (ZIKV) is implicated in fetal stillbirth, microcephaly, intracranial calcifications, and ocular anomalies following vertical transmission from infected mothers. In adults, infection may trigger autoimmune inflammatory polyneuropathy. Transmission most commonly follows the bite of infected Aedes mosquitoes but may also occur through sexual intercourse or receipt of blood products. Definitive diagnosis through detection of viral RNA is possible in serum or plasma within 10 days of disease onset, in whole blood within 3 weeks of onset, and in semen for up to 3 months. Serological diagnosis is nonetheless critical because few patients have access to molecular diagnostics during the acute phase of infection and infection may be associated with only mild or inapparent disease that does not prompt molecular testing. Serological diagnosis is confounded by cross-reactivity of immune sera with other flaviviruses endemic in the areas where ZIKV has recently emerged. Accordingly, we built a high-density microarray comprising nonredundant 12-mer peptides that tile, with one-residue overlap, the proteomes of Zika, dengue, yellow fever, West Nile, Ilheus, Oropouche, and chikungunya viruses. Serological analysis enabled discovery of a ZIKV NS2B 20-residue peptide that had high sensitivity (96.0%) and specificity (95.9%) versus natural infection with or vaccination against dengue, chikungunya, yellow fever, West Nile, tick-borne encephalitis, or Japanese encephalitis virus in a microarray assay and an enzyme-linked immunosorbent assay (ELISA) of early-convalescent-phase sera (2 to 3 weeks after onset of symptomatic infection). IMPORTANCE The emergence of Zika virus (ZIKV) as a teratogen is a profound challenge to global public health. Molecular diagnosis of infection is straightforward during the 3-week period when patients are viremic. However, serological diagnosis thereafter of historical exposure has been confounded by cross-reactivity. Using high-density peptide arrays that tile the proteomes of a selection of flaviviruses to identify a ZIKV-specific peptide, we established two assays that enable sensitive and specific diagnosis of exposure to ZIKV. These assays may be useful in guiding clinical management of mothers at risk for potential exposure to ZIKV and enable insights into the epidemiology of ZIKV infections.

  17. Detecting novel genes with sparse arrays

    PubMed Central

    Haiminen, Niina; Smit, Bart; Rautio, Jari; Vitikainen, Marika; Wiebe, Marilyn; Martinez, Diego; Chee, Christine; Kunkel, Joe; Sanchez, Charles; Nelson, Mary Anne; Pakula, Tiina; Saloheimo, Markku; Penttilä, Merja; Kivioja, Teemu

    2014-01-01

    Species-specific genes play an important role in defining the phenotype of an organism. However, current gene prediction methods can only efficiently find genes that share features such as sequence similarity or general sequence characteristics with previously known genes. Novel sequencing methods and tiling arrays can be used to find genes without prior information and they have demonstrated that novel genes can still be found from extensively studied model organisms. Unfortunately, these methods are expensive and thus are not easily applicable, e.g., to finding genes that are expressed only in very specific conditions. We demonstrate a method for finding novel genes with sparse arrays, applying it on the 33.9 Mb genome of the filamentous fungus Trichoderma reesei. Our computational method does not require normalisations between arrays and it takes into account the multiple-testing problem typical for analysis of microarray data. In contrast to tiling arrays, that use overlapping probes, only one 25mer microarray oligonucleotide probe was used for every 100 b. Thus, only relatively little space on a microarray slide was required to cover the intergenic regions of a genome. The analysis was done as a by-product of a conventional microarray experiment with no additional costs. We found at least 23 good candidates for novel transcripts that could code for proteins and all of which were expressed at high levels. Candidate genes were found to neighbour ire1 and cre1 and many other regulatory genes. Our simple, low-cost method can easily be applied to finding novel species-specific genes without prior knowledge of their sequence properties. PMID:20691772

  18. The use of waste ceramic tile in cement production

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Ay, N.; Uenal, M.

    In ceramic tile production, because of various reasons, unsold fired products come out. These are waste tiles and only a little part of them are used. Remainings create environmental problems. If these waste tiles are used in cement production, this pollution decreases. In this study, usage of waste tile as pozzolan was studied. Waste tile was added into Portland cement in 25%, 30%, 35%, and 40% weight ratios. Pozzolanic properties of waste tile and setting time, volume stability, particle size, density, specific surface area, and strength of cement including waste tile were investigated. The test results indicated that the wastemore » tiles show pozzolanic properties, and chemical and physical properties of the cement including tile conforms to cement standard up to the addition of 35% waste tile.« less

  19. Benthic grazing in a eutrophic river: cascading effects of zoobenthivorous fish mask direct effects of herbivorous fish

    PubMed Central

    Cob Chaves, Daniel; Richter, Marc; Mewes, Daniela; Schneider, Jörg; Hübner, Dirk; Winkelmann, Carola

    2018-01-01

    Benthic grazing strongly controls periphyton biomass. The question therefore arises whether benthic grazing could be used as a tool to reduce excessive growth of periphyton in nutrient-enriched rivers. Although benthic invertebrate grazers reduce the growth of periphyton, this is highly context dependent. Here we assessed whether the only obligate herbivorous fish in European rivers, the common nase (Chondrostoma nasus L.), is able to reduce periphyton biomass in a eutrophic river. We conducted three consecutive in situ experiments at low, intermediate and high densities of nase in the river using standard tiles on the river bottom naturally covered with periphyton that were accessible to fish and tiles that excluded fish foraging with electric exclosures. The biomass of benthic invertebrate grazers was very low relative to nase. We hypothesised that nase would reduce periphyton biomass on accessible tiles and therefore expected higher periphyton biomass on the exclosure tiles, at least at intermediate and high densities of nase in the river. Contrary to our expectation, the impact of fish grazing was low even at high fish density, as judged by the significantly lower chlorophyll a concentration on exclosure tiles even though the ash-free dry mass on accessible and exclosure tiles did not differ. The lower chlorophyll a concentrations on exclosure tiles might be explained by a higher biomass of invertebrate grazers on the exclosure tiles, which would indicate that the effect of invertebrate grazers was stronger than that of herbivorous fish grazers. The high biomass of invertebrate grazers on exclosure tiles likely arose from the exclusion of zoobenthivorous fish, which occur in the river at high densities. The results of our small-scale experiments suggested that cascading top-down effects of zoobenthivorous fish have a higher impact on periphyton biomass than direct effects of herbivorous nase. PMID:29473006

  20. Reuse of solid petroleum waste in the manufacture of porcelain stoneware tile.

    PubMed

    Pinheiro, B C A; Holanda, J N F

    2013-03-30

    This study investigates the incorporation of solid petroleum waste as raw material into a porcelain stoneware tile body, in replacement to natural kaolin material by up to 5 wt.%. Tile formulations containing solid petroleum waste were pressed and fired at 1240 °C by using a fast-firing cycle. The tile pieces were tested to determine their properties (linear shrinkage, water absorption, apparent density, and flexural strength), sintered microstructure, and leaching toxicity. The results therefore indicated that the growing addition of solid petroleum waste into tile formulations leads to a decrease of linear shrinkage, apparent density, and flexural strength, and to an increase of water absorption of the produced tile materials. It was also found that the replacement of kaolin with solid petroleum waste, in the range up to 2.5 wt.%, allows the production of porcelain stoneware tile (group BIa, ISO 13006 standard). All concentrations of Ag, As, Ba, Cd, Cr (total), Hg, and Pb of the fired porcelain stoneware tile pieces in the leachate comply with the current regulatory limits. These results indicate that the solid petroleum waste could be used for high-quality porcelain stoneware tile production, thus giving rise to a new possibility for an environmentally friendly management of this abundant waste. Copyright © 2013 Elsevier Ltd. All rights reserved.

  1. Tile-based parallel coordinates and its application in financial visualization

    NASA Astrophysics Data System (ADS)

    Alsakran, Jamal; Zhao, Ye; Zhao, Xinlei

    2010-01-01

    Parallel coordinates technique has been widely used in information visualization applications and it has achieved great success in visualizing multivariate data and perceiving their trends. Nevertheless, visual clutter usually weakens or even diminishes its ability when the data size increases. In this paper, we first propose a tile-based parallel coordinates, where the plotting area is divided into rectangular tiles. Each tile stores an intersection density that counts the total number of polylines intersecting with that tile. Consequently, the intersection density is mapped to optical attributes, such as color and opacity, by interactive transfer functions. The method visualizes the polylines efficiently and informatively in accordance with the density distribution, and thus, reduces visual cluttering and promotes knowledge discovery. The interactivity of our method allows the user to instantaneously manipulate the tiles distribution and the transfer functions. Specifically, the classic parallel coordinates rendering is a special case of our method when each tile represents only one pixel. A case study on a real world data set, U.S. stock mutual fund data of year 2006, is presented to show the capability of our method in visually analyzing financial data. The presented visual analysis is conducted by an expert in the domain of finance. Our method gains the support from professionals in the finance field, they embrace it as a potential investment analysis tool for mutual fund managers, financial planners, and investors.

  2. Nucleosome positioning from tiling microarray data.

    PubMed

    Yassour, Moran; Kaplan, Tommy; Jaimovich, Ariel; Friedman, Nir

    2008-07-01

    The packaging of DNA around nucleosomes in eukaryotic cells plays a crucial role in regulation of gene expression, and other DNA-related processes. To better understand the regulatory role of nucleosomes, it is important to pinpoint their position in a high (5-10 bp) resolution. Toward this end, several recent works used dense tiling arrays to map nucleosomes in a high-throughput manner. These data were then parsed and hand-curated, and the positions of nucleosomes were assessed. In this manuscript, we present a fully automated algorithm to analyze such data and predict the exact location of nucleosomes. We introduce a method, based on a probabilistic graphical model, to increase the resolution of our predictions even beyond that of the microarray used. We show how to build such a model and how to compile it into a simple Hidden Markov Model, allowing for a fast and accurate inference of nucleosome positions. We applied our model to nucleosomal data from mid-log yeast cells reported by Yuan et al. and compared our predictions to those of the original paper; to a more recent method that uses five times denser tiling arrays as explained by Lee et al.; and to a curated set of literature-based nucleosome positions. Our results suggest that by applying our algorithm to the same data used by Yuan et al. our fully automated model traced 13% more nucleosomes, and increased the overall accuracy by about 20%. We believe that such an improvement opens the way for a better understanding of the regulatory mechanisms controlling gene expression, and how they are encoded in the DNA.

  3. Tile Drainage Density Reduces Groundwater Travel Times and Compromises Riparian Buffer Effectiveness.

    PubMed

    Schilling, Keith E; Wolter, Calvin F; Isenhart, Thomas M; Schultz, Richard C

    2015-11-01

    Strategies to reduce nitrate-nitrogen (nitrate) pollution delivered to streams often seek to increase groundwater residence time to achieve measureable results, yet the effects of tile drainage on residence time have not been well documented. In this study, we used a geographic information system groundwater travel time model to quantify the effects of artificial subsurface drainage on groundwater travel times in the 7443-ha Bear Creek watershed in north-central Iowa. Our objectives were to evaluate how mean groundwater travel times changed with increasing drainage intensity and to assess how tile drainage density reduces groundwater contributions to riparian buffers. Results indicate that mean groundwater travel times are reduced with increasing degrees of tile drainage. Mean groundwater travel times decreased from 5.6 to 1.1 yr, with drainage densities ranging from 0.005 m (7.6 mi) to 0.04 m (62 mi), respectively. Model simulations indicate that mean travel times with tile drainage are more than 150 times faster than those that existed before settlement. With intensive drainage, less than 2% of the groundwater in the basin appears to flow through a perennial stream buffer, thereby reducing the effectiveness of this practice to reduce stream nitrate loads. Hence, strategies, such as reconnecting tile drainage to buffers, are promising because they increase groundwater residence times in tile-drained watersheds. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

  4. Application of Broad-Spectrum Resequencing Microarray for Genotyping Rhabdoviruses▿

    PubMed Central

    Dacheux, Laurent; Berthet, Nicolas; Dissard, Gabriel; Holmes, Edward C.; Delmas, Olivier; Larrous, Florence; Guigon, Ghislaine; Dickinson, Philip; Faye, Ousmane; Sall, Amadou A.; Old, Iain G.; Kong, Katherine; Kennedy, Giulia C.; Manuguerra, Jean-Claude; Cole, Stewart T.; Caro, Valérie; Gessain, Antoine; Bourhy, Hervé

    2010-01-01

    The rapid and accurate identification of pathogens is critical in the control of infectious disease. To this end, we analyzed the capacity for viral detection and identification of a newly described high-density resequencing microarray (RMA), termed PathogenID, which was designed for multiple pathogen detection using database similarity searching. We focused on one of the largest and most diverse viral families described to date, the family Rhabdoviridae. We demonstrate that this approach has the potential to identify both known and related viruses for which precise sequence information is unavailable. In particular, we demonstrate that a strategy based on consensus sequence determination for analysis of RMA output data enabled successful detection of viruses exhibiting up to 26% nucleotide divergence with the closest sequence tiled on the array. Using clinical specimens obtained from rabid patients and animals, this method also shows a high species level concordance with standard reference assays, indicating that it is amenable for the development of diagnostic assays. Finally, 12 animal rhabdoviruses which were currently unclassified, unassigned, or assigned as tentative species within the family Rhabdoviridae were successfully detected. These new data allowed an unprecedented phylogenetic analysis of 106 rhabdoviruses and further suggest that the principles and methodology developed here may be used for the broad-spectrum surveillance and the broader-scale investigation of biodiversity in the viral world. PMID:20610710

  5. Tethers as Debris: Simulating Impacts of Kevlar Tethers on Shuttle Tiles

    NASA Technical Reports Server (NTRS)

    Evans, Steven W.

    2004-01-01

    In a previous paper I examined the effects of impacts of polymer tethers on aluminum plates using the SPHC hydrodynamic code. In this paper I apply tether models to a new target - models of Space Shuttle tiles developed during the STS 107 accident investigation. In this three-dimensional simulation, a short tether fragment strikes a single tile supported on an aluminum backing plate. A tile of the LI-900 material is modeled. Penetration and damage to the tile and the backwall are characterized for three normal impact velocities. The tether is modeled as a bundle of eight 1-mm strands, with the bundle having dimensions 2-mm x 4-mm x 20-cm. The bulk material properties used are those of Kevlar(TradeMark) 49, for which a Mie-Gruneisen multiphase equation of state (eos) is used. In addition, the strength model is applied in a linear sense, such that tensile loads along the strand length are supported, but there is no strength in the lateral directions. Tile models include the various layers making up the tile structure. The outermost layer is a relatively dense borosilicate glass, known as RCG, 0.5-mm thick. The RCG layer is present on the top and four sides of the tile. Below this coating is the bulk of the tile, 1.8- in thick, made of LI-900, a product consisting of rigidized fiberous silica with a density of 9 lWft3. Below the main insulating layer is a bottom layer of the same material that has been treated to increase its density by approximately 69% to improve its strength. This densified layer is bonded to a Strain Isolation Pad (SIP), modeled as a refractory felt fabric. The SIP is bonded to an aluminum 2024 wall 0.1-in thick. The tile and backwall materials use a Me-Gruneisen multiphase eos, with the exception of the SIP felt, which uses a fabric equation of state. Fabrics must be crushed to the full bulk material density before bulk material properties and a Mie-Gruneisen eos are applied. Tether fragment impact speeds of 3,7, and 10 km/s are simulated, with impact velocities normal to the tile face. Damage results are presented in tabular format.

  6. Bayesian hierarchical modeling for subject-level response classification in peptide microarray immunoassays

    PubMed Central

    Imholte, Gregory; Gottardo, Raphael

    2017-01-01

    Summary The peptide microarray immunoassay simultaneously screens sample serum against thousands of peptides, determining the presence of antibodies bound to array probes. Peptide microarrays tiling immunogenic regions of pathogens (e.g. envelope proteins of a virus) are an important high throughput tool for querying and mapping antibody binding. Because of the assay’s many steps, from probe synthesis to incubation, peptide microarray data can be noisy with extreme outliers. In addition, subjects may produce different antibody profiles in response to an identical vaccine stimulus or infection, due to variability among subjects’ immune systems. We present a robust Bayesian hierarchical model for peptide microarray experiments, pepBayes, to estimate the probability of antibody response for each subject/peptide combination. Heavy-tailed error distributions accommodate outliers and extreme responses, and tailored random effect terms automatically incorporate technical effects prevalent in the assay. We apply our model to two vaccine trial datasets to demonstrate model performance. Our approach enjoys high sensitivity and specificity when detecting vaccine induced antibody responses. A simulation study shows an adaptive thresholding classification method has appropriate false discovery rate control with high sensitivity, and receiver operating characteristics generated on vaccine trial data suggest that pepBayes clearly separates responses from non-responses. PMID:27061097

  7. Ceramic-ceramic shell tile thermal protection system and method thereof

    NASA Technical Reports Server (NTRS)

    Riccitiello, Salvatore R. (Inventor); Smith, Marnell (Inventor); Goldstein, Howard E. (Inventor); Zimmerman, Norman B. (Inventor)

    1986-01-01

    A ceramic reusable, externally applied composite thermal protection system (TPS) is proposed. The system functions by utilizing a ceramic/ceramic upper shell structure which effectively separates its primary functions as a thermal insulator and as a load carrier to transmit loads to the cold structure. The composite tile system also prevents impact damage to the atmospheric entry vehicle thermal protection system. The composite tile comprises a structurally strong upper ceramic/ceramic shell manufactured from ceramic fibers and ceramic matrix meeting the thermal and structural requirements of a tile used on a re-entry aerospace vehicle. In addition, a lightweight high temperature ceramic lower temperature base tile is used. The upper shell and lower tile are attached by means effective to withstand the extreme temperatures (3000 to 3200F) and stress conditions. The composite tile may include one or more layers of variable density rigid or flexible thermal insulation. The assembly of the overall tile is facilitated by two or more locking mechanisms on opposing sides of the overall tile assembly. The assembly may occur subsequent to the installation of the lower shell tile on the spacecraft structural skin.

  8. Divertor sheath power studies in DIII-D using fixed Langmuir probes and three-dimensional modeling of tile heat flows

    NASA Astrophysics Data System (ADS)

    Donovan, D.; Nygren, R.; Buchenauer, D.; Watkins, J.; Rudakov, D.; Leonard, A.; Wong, C. P. C.; Makowski, M.

    2014-04-01

    Experimental results are presented from the three-Langmuir probe (LP) diagnostic head of the divertor material evaluation system (DiMES) on DIII-D that confirm the size of the projected current collection area of the LPs, which is essential for properly measuring ion saturation current density (Jsat) and the sheath power transmission factor (SPTF). Also using the 3-LP DiMES head, the hypothesis that collisional effects on plasma density occurring in the magnetic sheath of the tile are responsible for a lower than expected SPTF is tested and deemed not to have a significant impact on the SPTF. Three-dimensional thermal modeling of wall tiles is presented that accounts for lateral heat conduction, temperature dependence of tile material properties and radiative heat loss from the tile surface. This modeling was developed to be used in the analysis of temperature profiles of the divertor embedded thermocouple (TC) array to obtain more accurate interpretations of TC temperature profiles to infer divertor surface heat flux than have previously been accomplished using more basic one-dimensional methods.

  9. Laser ultrasonics for bulk-density distribution measurement on green ceramic tiles

    NASA Astrophysics Data System (ADS)

    Revel, G. M.; Cavuto, A.; Pandarese, G.

    2016-10-01

    In this paper a Laser Ultrasonics (LUT) system is developed and applied to measure bulk density distribution of green ceramic tiles, which are porous materials with low heat conductivity. Bulk density of green ceramic bodies is a fundamental parameter to be kept under control in the industrial production of ceramic tiles. The LUT system proposed is based on a Nd:YAG pulsed laser for excitation and an air-coupled electro-capacitive transducer for detection. The paper reports experimental apparent bulk-density measurements on white ceramic bodies after a calibration procedures. The performances observed are better than those previously achieved by authors using air-coupled ultrasonic probes for both emission and detection, allowing to reduce average uncertainty down to about ±6 kg/m3 (±0.3%), thanks to the increase in excitation efficiency and lateral resolution, while maintaining potential flexibility for on-line application. The laser ultrasonic procedure proposed is available for both on-line and off-line application. In this last case it is possible to obtain bulk density maps with high spatial resolution by a 2D scan without interrupting the production process.

  10. Identification of transcribed sequences in Arabidopsis thaliana by using high-resolution genome tiling arrays

    PubMed Central

    Stolc, Viktor; Samanta, Manoj Pratim; Tongprasit, Waraporn; Sethi, Himanshu; Liang, Shoudan; Nelson, David C.; Hegeman, Adrian; Nelson, Clark; Rancour, David; Bednarek, Sebastian; Ulrich, Eldon L.; Zhao, Qin; Wrobel, Russell L.; Newman, Craig S.; Fox, Brian G.; Phillips, George N.; Markley, John L.; Sussman, Michael R.

    2005-01-01

    Using a maskless photolithography method, we produced DNA oligonucleotide microarrays with probe sequences tiled throughout the genome of the plant Arabidopsis thaliana. RNA expression was determined for the complete nuclear, mitochondrial, and chloroplast genomes by tiling 5 million 36-mer probes. These probes were hybridized to labeled mRNA isolated from liquid grown T87 cells, an undifferentiated Arabidopsis cell culture line. Transcripts were detected from at least 60% of the nearly 26,330 annotated genes, which included 151 predicted genes that were not identified previously by a similar genome-wide hybridization study on four different cell lines. In comparison with previously published results with 25-mer tiling arrays produced by chromium masking-based photolithography technique, 36-mer oligonucleotide probes were found to be more useful in identifying intron–exon boundaries. Using two-dimensional HPLC tandem mass spectrometry, a small-scale proteomic analysis was performed with the same cells. A large amount of strongly hybridizing RNA was found in regions “antisense” to known genes. Similarity of antisense activities between the 25-mer and 36-mer data sets suggests that it is a reproducible and inherent property of the experiments. Transcription activities were also detected for many of the intergenic regions and the small RNAs, including tRNA, small nuclear RNA, small nucleolar RNA, and microRNA. Expression of tRNAs correlates with genome-wide amino acid usage. PMID:15755812

  11. Identification of transcribed sequences in Arabidopsis thaliana by using high-resolution genome tiling arrays

    NASA Technical Reports Server (NTRS)

    Stolc, Viktor; Samanta, Manoj Pratim; Tongprasit, Waraporn; Sethi, Himanshu; Liang, Shoudan; Nelson, David C.; Hegeman, Adrian; Nelson, Clark; Rancour, David; Bednarek, Sebastian; hide

    2005-01-01

    Using a maskless photolithography method, we produced DNA oligonucleotide microarrays with probe sequences tiled throughout the genome of the plant Arabidopsis thaliana. RNA expression was determined for the complete nuclear, mitochondrial, and chloroplast genomes by tiling 5 million 36-mer probes. These probes were hybridized to labeled mRNA isolated from liquid grown T87 cells, an undifferentiated Arabidopsis cell culture line. Transcripts were detected from at least 60% of the nearly 26,330 annotated genes, which included 151 predicted genes that were not identified previously by a similar genome-wide hybridization study on four different cell lines. In comparison with previously published results with 25-mer tiling arrays produced by chromium masking-based photolithography technique, 36-mer oligonucleotide probes were found to be more useful in identifying intron-exon boundaries. Using two-dimensional HPLC tandem mass spectrometry, a small-scale proteomic analysis was performed with the same cells. A large amount of strongly hybridizing RNA was found in regions "antisense" to known genes. Similarity of antisense activities between the 25-mer and 36-mer data sets suggests that it is a reproducible and inherent property of the experiments. Transcription activities were also detected for many of the intergenic regions and the small RNAs, including tRNA, small nuclear RNA, small nucleolar RNA, and microRNA. Expression of tRNAs correlates with genome-wide amino acid usage.

  12. Diagnosis of Zika Virus Infection by Peptide Array and Enzyme-Linked Immunosorbent Assay

    PubMed Central

    Caciula, Adrian; Price, Adam; Thakkar, Riddhi; Ng, James; Chauhan, Lokendra V.; Jain, Komal; Che, Xiaoyu; Espinosa, Diego A.; Montoya Cruz, Magelda; Balmaseda, Angel; Sullivan, Eric H.; Patel, Jigar J.; Jarman, Richard G.; Rakeman, Jennifer L.; Egan, Christina T.; Reusken, Chantal B. E. M.; Koopmans, Marion P. G.; Harris, Eva; Tokarz, Rafal; Briese, Thomas

    2018-01-01

    ABSTRACT Zika virus (ZIKV) is implicated in fetal stillbirth, microcephaly, intracranial calcifications, and ocular anomalies following vertical transmission from infected mothers. In adults, infection may trigger autoimmune inflammatory polyneuropathy. Transmission most commonly follows the bite of infected Aedes mosquitoes but may also occur through sexual intercourse or receipt of blood products. Definitive diagnosis through detection of viral RNA is possible in serum or plasma within 10 days of disease onset, in whole blood within 3 weeks of onset, and in semen for up to 3 months. Serological diagnosis is nonetheless critical because few patients have access to molecular diagnostics during the acute phase of infection and infection may be associated with only mild or inapparent disease that does not prompt molecular testing. Serological diagnosis is confounded by cross-reactivity of immune sera with other flaviviruses endemic in the areas where ZIKV has recently emerged. Accordingly, we built a high-density microarray comprising nonredundant 12-mer peptides that tile, with one-residue overlap, the proteomes of Zika, dengue, yellow fever, West Nile, Ilheus, Oropouche, and chikungunya viruses. Serological analysis enabled discovery of a ZIKV NS2B 20-residue peptide that had high sensitivity (96.0%) and specificity (95.9%) versus natural infection with or vaccination against dengue, chikungunya, yellow fever, West Nile, tick-borne encephalitis, or Japanese encephalitis virus in a microarray assay and an enzyme-linked immunosorbent assay (ELISA) of early-convalescent-phase sera (2 to 3 weeks after onset of symptomatic infection). PMID:29511073

  13. Micro-Scale Genomic DNA Copy Number Aberrations as Another Means of Mutagenesis in Breast Cancer

    PubMed Central

    Chao, Hann-Hsiang; He, Xiaping; Parker, Joel S.; Zhao, Wei; Perou, Charles M.

    2012-01-01

    Introduction In breast cancer, the basal-like subtype has high levels of genomic instability relative to other breast cancer subtypes with many basal-like-specific regions of aberration. There is evidence that this genomic instability extends to smaller scale genomic aberrations, as shown by a previously described micro-deletion event in the PTEN gene in the Basal-like SUM149 breast cancer cell line. Methods We sought to identify if small regions of genomic DNA copy number changes exist by using a high density, gene-centric Comparative Genomic Hybridizations (CGH) array on cell lines and primary tumors. A custom tiling array for CGH (244,000 probes, 200 bp tiling resolution) was created to identify small regions of genomic change, which was focused on previously identified basal-like-specific, and general cancer genes. Tumor genomic DNA from 94 patients and 2 breast cancer cell lines was labeled and hybridized to these arrays. Aberrations were called using SWITCHdna and the smallest 25% of SWITCHdna-defined genomic segments were called micro-aberrations (<64 contiguous probes, ∼ 15 kb). Results Our data showed that primary tumor breast cancer genomes frequently contained many small-scale copy number gains and losses, termed micro-aberrations, most of which are undetectable using typical-density genome-wide aCGH arrays. The basal-like subtype exhibited the highest incidence of these events. These micro-aberrations sometimes altered expression of the involved gene. We confirmed the presence of the PTEN micro-amplification in SUM149 and by mRNA-seq showed that this resulted in loss of expression of all exons downstream of this event. Micro-aberrations disproportionately affected the 5′ regions of the affected genes, including the promoter region, and high frequency of micro-aberrations was associated with poor survival. Conclusion Using a high-probe-density, gene-centric aCGH microarray, we present evidence of small-scale genomic aberrations that can contribute to gene inactivation. These events may contribute to tumor formation through mechanisms not detected using conventional DNA copy number analyses. PMID:23284754

  14. Effects of body formulation and firing temperature to properties of ceramic tile incorporated with electric arc furnace (EAF) slag waste

    NASA Astrophysics Data System (ADS)

    Sharif, Nurulakmal Mohd; Lim, Chi Yang; Teo, Pao Ter; Seman, Anasyida Abu

    2017-07-01

    Significant quantities of sludge and slag are generated as waste materials or by-products from steel industries. One of the by-products is Electric Arc Furnace (EAF) steel slag which consists of oxides such as CaO, Al2O3 and FeO. This makes it possible for slag to partially replace the raw materials in ceramic tile production. In our preliminary assessment of incorporating the EAF slag into ceramic tile, it was revealed that at fixed firing temperature of 1150°C, the tile of composition 40 wt.% EAF slag - 60 wt.% ball clay has comparable properties with commercial ceramic tile. Thus, this current study would focus on effects of body formulation (different weight percentages of K-feldspar and silica) and different firing temperatures to properties of EAF slag added ceramic tile. EAF slag from Southern Steel Berhad (SSB) was crushed into micron size (EAF slag content was 40 wt.%) and milled with ball clay, K-feldspar and silica before compacted and fired at 1125°C and 1150°C. The EAF slag added tile was characterized in terms of water absorption, apparent porosity, bulk density, modulus of rupture (MOR) and phase analysis via X-ray diffraction (XRD). The composition of 40 wt.% EAF slag - 30 wt.% ball clay - 10 wt.% K-feldspar - 20 wt.% silica (10F_20S), fired at 1150°C showed the lowest water absorption, apparent porosity and highest bulk density due to enhancement of densification process during firing. However, the same composition of ceramic tile (10F_20S) had the highest MOR at lower firing temperature of 1125°C, contributed by presence of the highest total amount of anorthite and wollastonite reinforcement crystalline phases (78.40 wt.%) in the tile. Overall, both the water absorption and MOR of all ceramic tiles surpassed the requirement regulated by MS ISO 13006:2014 Standard (Annex G: Dry-pressed ceramic tile with low water absorption, Eb ≤ 0.50 % and minimum MOR of 35 MPa).

  15. Measuring Fracture Times Of Ceramics

    NASA Technical Reports Server (NTRS)

    Shlichta, Paul J.; Bister, Leo; Bickler, Donald G.

    1989-01-01

    Electrical measurements complement or replace fast cinematography. Electronic system measures microsecond time intervals between impacts of projectiles on ceramic tiles and fracture tiles. Used in research on ceramics and ceramic-based composite materials such as armor. Hardness and low density of ceramics enable them to disintegrate projectiles more efficiently than metals. Projectile approaches ceramic tile specimen. Penetrating foil squares of triggering device activate display and recording instruments. As ceramic and resistive film break oscilloscope plots increase in electrical resistance of film.

  16. Environmental conditions and biotic interactions influence ecosystem structure and function in a drying stream

    USGS Publications Warehouse

    Ludlam, J.P.; Magoulick, D.D.

    2010-01-01

    Benthic consumers influence stream ecosystem structure and function, but these interactions depend on environmental context. We experimentally quantified the effects of central stoneroller minnows (Campostoma anomalum (Rafinesque) and Meek's crayfish (Orconectes meeki meeki (Faxon)) on benthic communities using electric exclusion quadrats in Little Mulberry Creek before (June) and during (August) seasonal stream drying. Unglazed ceramic tiles were deployed in June and August to measure periphyton and invertebrate abundance, and leafpack decomposition and primary production were also measured in August. Relationships between stoneroller and crayfish density and the size of consumer effects were evaluated with multiple linear regression models. Average chlorophyll a abundance was greater on exposed than exclusion tiles in August, but not in June. Sediment dry mass, periphyton ash-free dry mass (AFDM), and chironomid densities on tiles did not differ among treatments in either period. Leaf packs decayed faster in exposed than exclusion treatments (kexposed = 0.038 ?? 0.013, kexclusion = 0.007 ?? 0.002), but consumer effects were stronger in some pools than others. Leafpack invertebrate biomass and abundance and tile primary productivity did not differ among treatments. Consumer effects on chlorophyll a were related to crayfish and stoneroller density, and effects on chironomid density were related to stoneroller density. These results contrast with a previous exclusion experiment in Little Mulberry Creek that demonstrated strong consumer effects. The influence of stream drying on consumer effects appears to have been reduced by strong spates, underscoring the importance of conducting multi-year studies to determine the magnitude of variability in ecological interactions. ?? US Government: USGS 2010.

  17. Validation of isoleucine utilization targets in Plasmodium falciparum

    PubMed Central

    Istvan, Eva S.; Dharia, Neekesh V.; Bopp, Selina E.; Gluzman, Ilya; Winzeler, Elizabeth A.; Goldberg, Daniel E.

    2011-01-01

    Intraerythrocytic malaria parasites can obtain nearly their entire amino acid requirement by degrading host cell hemoglobin. The sole exception is isoleucine, which is not present in adult human hemoglobin and must be obtained exogenously. We evaluated two compounds for their potential to interfere with isoleucine utilization. Mupirocin, a clinically used antibacterial, kills Plasmodium falciparum parasites at nanomolar concentrations. Thiaisoleucine, an isoleucine analog, also has antimalarial activity. To identify targets of the two compounds, we selected parasites resistant to either mupirocin or thiaisoleucine. Mutants were analyzed by genome-wide high-density tiling microarrays, DNA sequencing, and copy number variation analysis. The genomes of three independent mupirocin-resistant parasite clones had all acquired either amplifications encompassing or SNPs within the chromosomally encoded organellar (apicoplast) isoleucyl-tRNA synthetase. Thiaisoleucine-resistant parasites had a mutation in the cytoplasmic isoleucyl-tRNA synthetase. The role of this mutation in thiaisoleucine resistance was confirmed by allelic replacement. This approach is generally useful for elucidation of new targets in P. falciparum. Our study shows that isoleucine utilization is an essential pathway that can be targeted for antimalarial drug development. PMID:21205898

  18. Harold Goldstein (R) and Dan Leiser (L) discuss bone implant development in the the Shuttle Tile

    NASA Technical Reports Server (NTRS)

    1993-01-01

    Harold Goldstein (R) and Dan Leiser (L) discuss bone implant development in the the Shuttle Tile Laboratory N-242. A spin-off of Ames research on both bone density in microgravity and on thermal protection foams is the bone-growth implant shown in 1993.

  19. Microintaglio Printing for Soft Lithography-Based in Situ Microarrays

    PubMed Central

    Biyani, Manish; Ichiki, Takanori

    2015-01-01

    Advances in lithographic approaches to fabricating bio-microarrays have been extensively explored over the last two decades. However, the need for pattern flexibility, a high density, a high resolution, affordability and on-demand fabrication is promoting the development of unconventional routes for microarray fabrication. This review highlights the development and uses of a new molecular lithography approach, called “microintaglio printing technology”, for large-scale bio-microarray fabrication using a microreactor array (µRA)-based chip consisting of uniformly-arranged, femtoliter-size µRA molds. In this method, a single-molecule-amplified DNA microarray pattern is self-assembled onto a µRA mold and subsequently converted into a messenger RNA or protein microarray pattern by simultaneously producing and transferring (immobilizing) a messenger RNA or a protein from a µRA mold to a glass surface. Microintaglio printing allows the self-assembly and patterning of in situ-synthesized biomolecules into high-density (kilo-giga-density), ordered arrays on a chip surface with µm-order precision. This holistic aim, which is difficult to achieve using conventional printing and microarray approaches, is expected to revolutionize and reshape proteomics. This review is not written comprehensively, but rather substantively, highlighting the versatility of microintaglio printing for developing a prerequisite platform for microarray technology for the postgenomic era. PMID:27600226

  20. Parallel, confocal, and complete spectrum imager for fluorescent detection of high-density microarray

    NASA Astrophysics Data System (ADS)

    Bogdanov, Valery L.; Boyce-Jacino, Michael

    1999-05-01

    Confined arrays of biochemical probes deposited on a solid support surface (analytical microarray or 'chip') provide an opportunity to analysis multiple reactions simultaneously. Microarrays are increasingly used in genetics, medicine and environment scanning as research and analytical instruments. A power of microarray technology comes from its parallelism which grows with array miniaturization, minimization of reagent volume per reaction site and reaction multiplexing. An optical detector of microarray signals should combine high sensitivity, spatial and spectral resolution. Additionally, low-cost and a high processing rate are needed to transfer microarray technology into biomedical practice. We designed an imager that provides confocal and complete spectrum detection of entire fluorescently-labeled microarray in parallel. Imager uses microlens array, non-slit spectral decomposer, and high- sensitive detector (cooled CCD). Two imaging channels provide a simultaneous detection of localization, integrated and spectral intensities for each reaction site in microarray. A dimensional matching between microarray and imager's optics eliminates all in moving parts in instrumentation, enabling highly informative, fast and low-cost microarray detection. We report theory of confocal hyperspectral imaging with microlenses array and experimental data for implementation of developed imager to detect fluorescently labeled microarray with a density approximately 103 sites per cm2.

  1. Structural investigation of re-deposited layers in JET

    NASA Astrophysics Data System (ADS)

    Likonen, J.; Vainonen-Ahlgren, E.; Khriachtchev, L.; Coad, J. P.; Rubel, M.; Renvall, T.; Arstila, K.; Hole, D. E.; Contributors to the EFDA-JET Work-programme

    2008-07-01

    JET Mk-II Gas Box divertor tiles exposed in 1998-2001 have been analysed with various ion beam techniques, secondary ion mass spectrometry (SIMS) and Raman spectroscopy. Inner divertor wall tiles removed in 2001 were covered with a duplex film. The inner layer was very rich in metallic impurities, with Be/C ˜ 1 and H-isotopes only present at low concentrations. The outer layer contained higher concentrations of D than normal for plasma-facing surfaces in JET (D/C ˜ 0.4), and Be/C ˜ 0.14. Raman and SIMS analyses show that the deposited films on inner divertor tiles are hydrogenated amorphous carbon with low sp 3 fractions. The deposits have polymeric structure and low density. Both Raman scattering and SIMS indicate that films on inner divertor wall Tiles 1 and 3, and on floor Tile 4 have some differences in the chemical structure of the deposited films

  2. Nondeterministic self-assembly of two tile types on a lattice.

    PubMed

    Tesoro, S; Ahnert, S E

    2016-04-01

    Self-assembly is ubiquitous in nature, particularly in biology, where it underlies the formation of protein quaternary structure and protein aggregation. Quaternary structure assembles deterministically and performs a wide range of important functions in the cell, whereas protein aggregation is the hallmark of a number of diseases and represents a nondeterministic self-assembly process. Here we build on previous work on a lattice model of deterministic self-assembly to investigate nondeterministic self-assembly of single lattice tiles and mixtures of two tiles at varying relative concentrations. Despite limiting the simplicity of the model to two interface types, which results in 13 topologically distinct single tiles and 106 topologically distinct sets of two tiles, we observe a wide variety of concentration-dependent behaviors. Several two-tile sets display critical behaviors in the form of a sharp transition from bound to unbound structures as the relative concentration of one tile to another increases. Other sets exhibit gradual monotonic changes in structural density, or nonmonotonic changes, while again others show no concentration dependence at all. We catalog this extensive range of behaviors and present a model that provides a reasonably good estimate of the critical concentrations for a subset of the critical transitions. In addition, we show that the structures resulting from these tile sets are fractal, with one of two different fractal dimensions.

  3. Identification of novel non-coding small RNAs from Streptococcus pneumoniae TIGR4 using high-resolution genome tiling arrays

    PubMed Central

    2010-01-01

    Background The identification of non-coding transcripts in human, mouse, and Escherichia coli has revealed their widespread occurrence and functional importance in both eukaryotic and prokaryotic life. In prokaryotes, studies have shown that non-coding transcripts participate in a broad range of cellular functions like gene regulation, stress and virulence. However, very little is known about non-coding transcripts in Streptococcus pneumoniae (pneumococcus), an obligate human respiratory pathogen responsible for significant worldwide morbidity and mortality. Tiling microarrays enable genome wide mRNA profiling as well as identification of novel transcripts at a high-resolution. Results Here, we describe a high-resolution transcription map of the S. pneumoniae clinical isolate TIGR4 using genomic tiling arrays. Our results indicate that approximately 66% of the genome is expressed under our experimental conditions. We identified a total of 50 non-coding small RNAs (sRNAs) from the intergenic regions, of which 36 had no predicted function. Half of the identified sRNA sequences were found to be unique to S. pneumoniae genome. We identified eight overrepresented sequence motifs among sRNA sequences that correspond to sRNAs in different functional categories. Tiling arrays also identified approximately 202 operon structures in the genome. Conclusions In summary, the pneumococcal operon structures and novel sRNAs identified in this study enhance our understanding of the complexity and extent of the pneumococcal 'expressed' genome. Furthermore, the results of this study open up new avenues of research for understanding the complex RNA regulatory network governing S. pneumoniae physiology and virulence. PMID:20525227

  4. Silica aerogel for capturing intact interplanetary dust particles for the Tanpopo experiment.

    PubMed

    Tabata, Makoto; Yano, Hajime; Kawai, Hideyuki; Imai, Eiichi; Kawaguchi, Yuko; Hashimoto, Hirofumi; Yamagishi, Akihiko

    2015-06-01

    In this paper, we report the progress in developing a silica-aerogel-based cosmic dust capture panel for use in the Tanpopo experiment on the International Space Station (ISS). Previous studies revealed that ultralow-density silica aerogel tiles, comprising two layers with densities of 0.01 and 0.03 g/cm(3) developed using our production technique, were suitable for achieving the scientific objectives of the astrobiological mission. A special density configuration (i.e., box framing) aerogel with a holder was designed to construct the capture panels. Qualification tests for an engineering model of the capture panel as an instrument aboard the ISS were successful. Sixty box-framing aerogel tiles were manufactured in a contamination-controlled environment.

  5. A portable high-power diode laser-based single-stage ceramic tile grout sealing system

    NASA Astrophysics Data System (ADS)

    Lawrence, J.; Schmidt, M. J. J.; Li, L.; Edwards, R. E.; Gale, A. W.

    2002-02-01

    By means of a 60 W high-power diode laser (HPDL) and a specially developed grout material the void between adjoining ceramic tiles has been successfully sealed. A single-stage process has been developed which uses a crushed ceramic tile mix to act as a tough, inexpensive bulk substrate and a glazed enamel surface to provide an impervious surface glaze. The single-stage ceramic tile grout sealing process yielded seals produced in normal atmospheric conditions that displayed no discernible cracks and porosities. The single-stage grout is simple to formulate and easy to apply. Tiles were successfully sealed with power densities as low as 200 kW/ mm2 and at rates of up to 600 mm/ min. Bonding of the enamel to the crushed ceramic tile mix was identified as being primarily due to van der Waals forces and, on a very small scale, some of the crushed ceramic tile mix material dissolving into the glaze. In terms of mechanical, physical and chemical characteristics, the single-stage ceramic tile grout was found to be far superior to the conventional epoxy tile grout and, in many instances, matched and occasionally surpassed that of the ceramic tiles themselves. What is more, the development of a hand-held HPDL beam delivery unit and the related procedures necessary to lead to the commercialisation of the single-stage ceramic tile grout sealing process are presented. Further, an appraisal of the potential hazards associated with the use of the HPDL in an industrial environment and the solutions implemented to ensure that the system complies with the relevant safety standards are given.

  6. Flow-pattern Guided Fabrication of High-density Barcode Antibody Microarray

    PubMed Central

    Ramirez, Lisa S.; Wang, Jun

    2016-01-01

    Antibody microarray as a well-developed technology is currently challenged by a few other established or emerging high-throughput technologies. In this report, we renovate the antibody microarray technology by using a novel approach for manufacturing and by introducing new features. The fabrication of our high-density antibody microarray is accomplished through perpendicularly oriented flow-patterning of single stranded DNAs and subsequent conversion mediated by DNA-antibody conjugates. This protocol outlines the critical steps in flow-patterning DNA, producing and purifying DNA-antibody conjugates, and assessing the quality of the fabricated microarray. The uniformity and sensitivity are comparable with conventional microarrays, while our microarray fabrication does not require the assistance of an array printer and can be performed in most research laboratories. The other major advantage is that the size of our microarray units is 10 times smaller than that of printed arrays, offering the unique capability of analyzing functional proteins from single cells when interfacing with generic microchip designs. This barcode technology can be widely employed in biomarker detection, cell signaling studies, tissue engineering, and a variety of clinical applications. PMID:26780370

  7. Structural tests on a tile/strain isolation pad thermal protection system. [space shuttles

    NASA Technical Reports Server (NTRS)

    Williams, J. G.

    1980-01-01

    The aluminum skin of the space shuttle is covered by a thermal protection system (TPS) consisting of a low density ceramic tile bonded to a matted-felt material called strain insulation pad (SIP). The structural characteristics of the TPS were studied experimentally under selected extreme load conditions. Three basic types of loads were imposed: tension, eccentrically applied tension, and combined in-plane force and transverse pressure. For some tests, transverse pressure was applied rapidly to simulate a transient shock wave passing over the tile. The failure mode for all specimens involved separation of the tile from the SIP at the silicone rubber bond interface. An eccentrically applied tension load caused the tile to separate from the SIP at loads lower than experienced at failure for pure tension loading. Moderate in-plane as well as shock loading did not cause a measurable reduction in the TPS ultimate failure strength. A strong coupling, however, was exhibited between in-plane and transverse loads and displacements.

  8. Low-density microarray technologies for rapid human norovirus genotyping

    USDA-ARS?s Scientific Manuscript database

    Human noroviruses cause up to 21 million cases of foodborne disease in the United States annually and are the most common cause of acute gastroenteritis in industrialized countries. To reduce the burden of foodborne disease associated with viruses, the use of low density DNA microarrays in conjuncti...

  9. Mapping of transcription factor binding regions in mammalian cells by ChIP: Comparison of array- and sequencing-based technologies

    PubMed Central

    Euskirchen, Ghia M.; Rozowsky, Joel S.; Wei, Chia-Lin; Lee, Wah Heng; Zhang, Zhengdong D.; Hartman, Stephen; Emanuelsson, Olof; Stolc, Viktor; Weissman, Sherman; Gerstein, Mark B.; Ruan, Yijun; Snyder, Michael

    2007-01-01

    Recent progress in mapping transcription factor (TF) binding regions can largely be credited to chromatin immunoprecipitation (ChIP) technologies. We compared strategies for mapping TF binding regions in mammalian cells using two different ChIP schemes: ChIP with DNA microarray analysis (ChIP-chip) and ChIP with DNA sequencing (ChIP-PET). We first investigated parameters central to obtaining robust ChIP-chip data sets by analyzing STAT1 targets in the ENCODE regions of the human genome, and then compared ChIP-chip to ChIP-PET. We devised methods for scoring and comparing results among various tiling arrays and examined parameters such as DNA microarray format, oligonucleotide length, hybridization conditions, and the use of competitor Cot-1 DNA. The best performance was achieved with high-density oligonucleotide arrays, oligonucleotides ≥50 bases (b), the presence of competitor Cot-1 DNA and hybridizations conducted in microfluidics stations. When target identification was evaluated as a function of array number, 80%–86% of targets were identified with three or more arrays. Comparison of ChIP-chip with ChIP-PET revealed strong agreement for the highest ranked targets with less overlap for the low ranked targets. With advantages and disadvantages unique to each approach, we found that ChIP-chip and ChIP-PET are frequently complementary in their relative abilities to detect STAT1 targets for the lower ranked targets; each method detected validated targets that were missed by the other method. The most comprehensive list of STAT1 binding regions is obtained by merging results from ChIP-chip and ChIP-sequencing. Overall, this study provides information for robust identification, scoring, and validation of TF targets using ChIP-based technologies. PMID:17568005

  10. Application of High-Density DNA Resequencing Microarray for Detection and Characterization of Botulinum Neurotoxin-Producing Clostridia

    PubMed Central

    Vanhomwegen, Jessica; Berthet, Nicolas; Mazuet, Christelle; Guigon, Ghislaine; Vallaeys, Tatiana; Stamboliyska, Rayna; Dubois, Philippe; Kennedy, Giulia C.; Cole, Stewart T.; Caro, Valérie; Manuguerra, Jean-Claude; Popoff, Michel-Robert

    2013-01-01

    Background Clostridium botulinum and related clostridia express extremely potent toxins known as botulinum neurotoxins (BoNTs) that cause severe, potentially lethal intoxications in humans. These BoNT-producing bacteria are categorized in seven major toxinotypes (A through G) and several subtypes. The high diversity in nucleotide sequence and genetic organization of the gene cluster encoding the BoNT components poses a great challenge for the screening and characterization of BoNT-producing strains. Methodology/Principal Findings In the present study, we designed and evaluated the performances of a resequencing microarray (RMA), the PathogenId v2.0, combined with an automated data approach for the simultaneous detection and characterization of BoNT-producing clostridia. The unique design of the PathogenID v2.0 array allows the simultaneous detection and characterization of 48 sequences targeting the BoNT gene cluster components. This approach allowed successful identification and typing of representative strains of the different toxinotypes and subtypes, as well as the neurotoxin-producing C. botulinum strain in a naturally contaminated food sample. Moreover, the method allowed fine characterization of the different neurotoxin gene cluster components of all studied strains, including genomic regions exhibiting up to 24.65% divergence with the sequences tiled on the arrays. Conclusions/Significance The severity of the disease demands rapid and accurate means for performing risk assessments of BoNT-producing clostridia and for tracing potentials sources of contamination in outbreak situations. The RMA approach constitutes an essential higher echelon component in a diagnostics and surveillance pipeline. In addition, it is an important asset to characterise potential outbreak related strains, but also environment isolates, in order to obtain a better picture of the molecular epidemiology of BoNT-producing clostridia. PMID:23818983

  11. Application of the Taguchi Method for Optimizing the Process Parameters of Producing Lightweight Aggregates by Incorporating Tile Grinding Sludge with Reservoir Sediments

    PubMed Central

    Chen, How-Ji; Chang, Sheng-Nan; Tang, Chao-Wei

    2017-01-01

    This study aimed to apply the Taguchi optimization technique to determine the process conditions for producing synthetic lightweight aggregate (LWA) by incorporating tile grinding sludge powder with reservoir sediments. An orthogonal array L16(45) was adopted, which consisted of five controllable four-level factors (i.e., sludge content, preheat temperature, preheat time, sintering temperature, and sintering time). Moreover, the analysis of variance method was used to explore the effects of the experimental factors on the particle density, water absorption, bloating ratio, and loss on ignition of the produced LWA. Overall, the produced aggregates had particle densities ranging from 0.43 to 2.1 g/cm3 and water absorption ranging from 0.6% to 13.4%. These values are comparable to the requirements for ordinary and high-performance LWAs. The results indicated that it is considerably feasible to produce high-performance LWA by incorporating tile grinding sludge with reservoir sediments. PMID:29125576

  12. Application of the Taguchi Method for Optimizing the Process Parameters of Producing Lightweight Aggregates by Incorporating Tile Grinding Sludge with Reservoir Sediments.

    PubMed

    Chen, How-Ji; Chang, Sheng-Nan; Tang, Chao-Wei

    2017-11-10

    This study aimed to apply the Taguchi optimization technique to determine the process conditions for producing synthetic lightweight aggregate (LWA) by incorporating tile grinding sludge powder with reservoir sediments. An orthogonal array L 16 (4⁵) was adopted, which consisted of five controllable four-level factors (i.e., sludge content, preheat temperature, preheat time, sintering temperature, and sintering time). Moreover, the analysis of variance method was used to explore the effects of the experimental factors on the particle density, water absorption, bloating ratio, and loss on ignition of the produced LWA. Overall, the produced aggregates had particle densities ranging from 0.43 to 2.1 g/cm³ and water absorption ranging from 0.6% to 13.4%. These values are comparable to the requirements for ordinary and high-performance LWAs. The results indicated that it is considerably feasible to produce high-performance LWA by incorporating tile grinding sludge with reservoir sediments.

  13. Improved porous silicon (P-Si) microarray based PSA (prostate specific antigen) immunoassay by optimized surface density of the capture antibody

    PubMed Central

    Lee, SangWook; Kim, Soyoun; Malm, Johan; Jeong, Ok Chan; Lilja, Hans; Laurell, Thomas

    2014-01-01

    Enriching the surface density of immobilized capture antibodies enhances the detection signal of antibody sandwich microarrays. In this study, we improved the detection sensitivity of our previously developed P-Si (porous silicon) antibody microarray by optimizing concentrations of the capturing antibody. We investigated immunoassays using a P-Si microarray at three different capture antibody (PSA - prostate specific antigen) concentrations, analyzing the influence of the antibody density on the assay detection sensitivity. The LOD (limit of detection) for PSA was 2.5ngmL−1, 80pgmL−1, and 800fgmL−1 when arraying the PSA antibody, H117 at the concentration 15µgmL−1, 35µgmL−1 and 154µgmL−1, respectively. We further investigated PSA spiked into human female serum in the range of 800fgmL−1 to 500ngmL−1. The microarray showed a LOD of 800fgmL−1 and a dynamic range of 800 fgmL−1 to 80ngmL−1 in serum spiked samples. PMID:24016590

  14. Experimental Approaches to Microarray Analysis of Tumor Samples

    ERIC Educational Resources Information Center

    Furge, Laura Lowe; Winter, Michael B.; Meyers, Jacob I.; Furge, Kyle A.

    2008-01-01

    Comprehensive measurement of gene expression using high-density nucleic acid arrays (i.e. microarrays) has become an important tool for investigating the molecular differences in clinical and research samples. Consequently, inclusion of discussion in biochemistry, molecular biology, or other appropriate courses of microarray technologies has…

  15. Use of Low-Density DNA Microarrays and Photopolymerization for Genotyping Foodborne-Associated Noroviruses

    USDA-ARS?s Scientific Manuscript database

    Human noroviruses cause up to 21 million cases of foodborne disease in the United States annually and are the most common cause of acute gastroenteritis in industrialized countries. To reduce the burden of foodborne disease associated with viruses, the use of low density DNA microarrays in conjunct...

  16. High-density polymer microarrays: identifying synthetic polymers that control human embryonic stem cell growth.

    PubMed

    Hansen, Anne; Mjoseng, Heidi K; Zhang, Rong; Kalloudis, Michail; Koutsos, Vasileios; de Sousa, Paul A; Bradley, Mark

    2014-06-01

    The fabrication of high-density polymer microarray is described, allowing the simultaneous and efficient evaluation of more than 7000 different polymers in a single-cellular-based screen. These high-density polymer arrays are applied in the search for synthetic substrates for hESCs culture. Up-scaling of the identified hit polymers enables long-term cellular cultivation and promoted successful stem-cell maintenance. © 2013 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  17. Fibrous-Ceramic/Aerogel Composite Insulating Tiles

    NASA Technical Reports Server (NTRS)

    White, Susan M.; Rasky, Daniel J.

    2004-01-01

    Fibrous-ceramic/aerogel composite tiles have been invented to afford combinations of thermal-insulation and mechanical properties superior to those attainable by making tiles of fibrous ceramics alone or aerogels alone. These lightweight tiles can be tailored to a variety of applications that range from insulating cryogenic tanks to protecting spacecraft against re-entry heating. The advantages and disadvantages of fibrous ceramics and aerogels can be summarized as follows: Tiles made of ceramic fibers are known for mechanical strength, toughness, and machinability. Fibrous ceramic tiles are highly effective as thermal insulators in a vacuum. However, undesirably, the porosity of these materials makes them permeable by gases, so that in the presence of air or other gases, convection and gas-phase conduction contribute to the effective thermal conductivity of the tiles. Other disadvantages of the porosity and permeability of fibrous ceramic tiles arise because gases (e.g., water vapor or cryogenic gases) can condense in pores. This condensation contributes to weight, and in the case of cryogenic systems, the heat of condensation undesirably adds to the heat flowing to the objects that one seeks to keep cold. Moreover, there is a risk of explosion associated with vaporization of previously condensed gas upon reheating. Aerogels offer low permeability, low density, and low thermal conductivity, but are mechanically fragile. The basic idea of the present invention is to exploit the best features of fibrous ceramic tiles and aerogels. In a composite tile according to the invention, the fibrous ceramic serves as a matrix that mechanically supports the aerogel, while the aerogel serves as a low-conductivity, low-permeability filling that closes what would otherwise be the open pores of the fibrous ceramic. Because the aerogel eliminates or at least suppresses permeation by gas, gas-phase conduction, and convection, the thermal conductivity of such a composite even at normal atmospheric pressure is not much greater than that of the fibrous ceramic alone in a vacuum.

  18. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Song, Xiaoling

    My research is on the synergistic regulation of PAI-1 by EGF and TGF-β. The mechanism of synergistic regulation of PAI-1 by EGF and TGF-β are addressed. Methods are described for effective identification of RNA accessible sites for antisense oligodexoxynucleotides (ODNs) and siRNA. In this study effective AS-ODN sequences for both Lcn2 and Bcl2 were identified by in vitro tiled microarray studies. Our results suggest that hybridization of ODN arrays to a target mRNA under physiological conditions might be used as a rapid and reliable in vitro method to accurately identify targets on mRNA molecules for effective antisense and potential siRNAmore » activity in vivo.« less

  19. Density-dependent effects of omnivorous stream crayfish on benthic trophic dynamics

    USGS Publications Warehouse

    Ludlam, J.P.; Banks, B. T.; Magoulick, Daniel D.

    2015-01-01

    Crayfish are abundant and important consumers in aquatic food webs and crayfish invasions have demonstrated strong effects of crayfish on multiple trophic levels. Density may be an important factor determining the role of omnivorous crayfish in benthic communities, especially if density alters the strength of trophic interactions. The effect of crayfish density on a simple benthic food web using ceramic tiles was examined in three treatments (crayfish exclusion cage, cage control (open to crayfish), and exposed ceramic tiles) in mesocosms stocked with 6, 12, or 18 crayfish·m-2. We hypothesized that at low densities crayfish consumption of herbivorous chironomids would increase algal abundance, but at high densities crayfish would reduce both periphyton and invertebrates. In the experiment, periphyton and chironomid abundance increased with declining crayfish biomass on day 30 but not day 15. The magnitude of crayfish effects on day 15 periphyton chlorophyll a abundance increased with crayfish biomass, but crayfish effects on day 30 periphyton chlorophyll a or chironomid biomass did not increase with crayfish biomass. In this experiment there was little evidence for a trophic cascade at low crayfish densities and strong omnivory by crayfish dominated trophic dynamics.

  20. Compressive Strength and Water Absorption of Pervious Concrete that Using the Fragments of Ceramics and Roof Tiles

    NASA Astrophysics Data System (ADS)

    Prahara, E.; Meilani

    2014-03-01

    Pervious concrete was introduced in America in 2003, popularized by Dan Brown and used as a rigid pavement in the open parking lot. Rigid pavement using pervious concrete can absorb water in the surface to go straight through the concrete to the ground below.This water flow is one of the benefit of using the pervious concrete. Using of wastes such as broken roof and ceramics tiles are not commonly used in Indonesia. Utilization these kind of wastes is predicted lower the compressive strength of pervious concrete as they are used as a substitute for coarse aggregate.In this research, pervious concrete is made using a mixture of the fragment of ceramics and roof tiles.This research using broken ceramics and roof tiles with a grain size that loose from 38 mm sieve, retained on 19 mm sieve and the coarse aggregate from crushed stone that loose 12.5 mm sieve, retained on 9.5 mm sieve. The water cement ratio is 0.3 and to assist the mixing process, the addition of addictive in pervious concrete is used.The size of coarse aggregate used in the mixture affects the strength of pervious concrete. The larger the size of aggregate, the obtained compressive strength becomes smaller. It also affects the density of pervious concrete. The using of mixture of ceramics and roof tiles only reduce 2 MPa of pervious concrete compressive strength so this mixture can be used as a substitute for coarse aggregate with a maximum portion of 30 %. The high porosity of the specimens causes the reduction of pervious concrete density that affect the compressive strength. This high level of porosity can be seen from the high level of water absorption that exceed the required limit of water infiltration.

  1. Foam on Tile Impact Modeling for the STS-107 Investigation

    NASA Technical Reports Server (NTRS)

    Stellingwerf, R. F.; Robinson, J. H.; Richardson, S.; Evans, S. W.; Stallworth, R.; Hovater, M.

    2004-01-01

    Following the breakup of the Space Shuttle Columbia during reentry a NASA/Contractor investigation team was formed to examine the probable damage inflicted on Orbiter Thermal Protection System elements by impact of External Tank insulating foam projectiles. The authors formed a working subgroup within the larger team to apply the Smooth Particle Hydrodynamics code SPHC to the damage estimation problem. Numerical models of the Orbiter's tiles and of the Tank's foam were constructed and used as inputs into the code. Material properties needed to properly model the tiles and foam were obtained from other working subgroups who performed tests on these items for this purpose. Two- and three-dimensional models of the tiles were constructed, including the glass outer layer, the main body of LI-900 insulation, the densified lower layer of LI-900, the Nomex felt mounting layer, and the Aluminum 2024 vehicle skin. A model for the BX-250 foam including porous compression, elastic rebound, and surface erosion was developed. Code results for the tile damage and foam behavior were extensively validated through comparison with Southwest Research Institute foam-on-tile impact experiments carried out in 1999. These tests involved small projectiles striking individual tiles and small tile arrays. Following code and model validation we simulated impacts of larger foam projectiles on the examples of tile systems used on the Orbiter. Results for impacts on the main landing gear door are presented in this paper, including effects of impacts at several angles, and of rapidly rotating projectiles. General results suggest that foam impacts on tiles at about 500 mph could cause appreciable damage if the impact angle is greater than about 20 degrees. Some variations of the foam properties, such as increased brittleness or increased density could increase damage in some cases. Rotation up to 17 rps failed to increase the damage for the two cases considered. This does not rule out other cases in which the rotational energy might lead to an increase in tile damage, but suggests that in most cases rotation will not be an important factor.

  2. Determination of elastic modulus of ceramics using ultrasonic testing

    NASA Astrophysics Data System (ADS)

    Sasmita, Firmansyah; Wibisono, Gatot; Judawisastra, Hermawan; Priambodo, Toni Agung

    2018-04-01

    Elastic modulus is important material property on structural ceramics application. However, bending test as a common method for determining this property require particular specimen preparation. Furthermore, elastic modulus of ceramics could vary because it depends on porosity content. For structural ceramics industry, such as ceramic tiles, this property is very important. This drives the development of new method to improve effectivity or verification method as well. In this research, ultrasonic testing was conducted to determine elastic modulus of soda lime glass and ceramic tiles. The experiment parameter was frequency of probe (1, 2, 4 MHz). Characterization of density and porosity were also done for analysis. Results from ultrasonic testing were compared with elastic modulus resulted from bending test. Elastic modulus of soda-lime glass based on ultrasonic testing showed excellent result with error 2.69% for 2 MHz probe relative to bending test result. Testing on red and white ceramic tiles were still contained error up to 41% and 158%, respectively. The results for red ceramic tile showed trend that 1 MHz probe gave better accuracy in determining elastic modulus. However, testing on white ceramic tile showed different trend. It was due to the presence of porosity and near field effect.

  3. New Insights into the RNA-Based Mechanism of Action of the Anticancer Drug 5′-Fluorouracil in Eukaryotic Cells

    PubMed Central

    Mojardín, Laura; Botet, Javier; Quintales, Luis; Moreno, Sergio; Salas, Margarita

    2013-01-01

    5-Fluorouracil (5FU) is a chemotherapeutic drug widely used in treating a range of advanced, solid tumours and, in particular, colorectal cancer. Here, we used high-density tiling DNA microarray technology to obtain the specific transcriptome-wide response induced by 5FU in the eukaryotic model Schizosaccharomyces pombe. This approach combined with real-time quantitative PCR analysis allowed us to detect splicing defects of a significant number of intron-containing mRNA, in addition to identify some rRNA and tRNA processing defects after 5FU treatment. Interestingly, our studies also revealed that 5FU specifically induced the expression of certain genes implicated in the processing of mRNA, tRNA and rRNA precursors, and in the post-transcriptional modification of uracil residues in RNA. The transcription of several tRNA genes was also significantly induced after drug exposure. These transcriptional changes might represent a cellular response mechanism to counteract 5FU damage since deletion strains for some of these up-regulated genes were hypersensitive to 5FU. Moreover, most of these RNA processing genes have human orthologs that participate in conserved pathways, suggesting that they could be novel targets to improve the efficacy of 5FU-based treatments. PMID:24223771

  4. Oligo Design: a computer program for development of probes for oligonucleotide microarrays.

    PubMed

    Herold, Keith E; Rasooly, Avraham

    2003-12-01

    Oligonucleotide microarrays have demonstrated potential for the analysis of gene expression, genotyping, and mutational analysis. Our work focuses primarily on the detection and identification of bacteria based on known short sequences of DNA. Oligo Design, the software described here, automates several design aspects that enable the improved selection of oligonucleotides for use with microarrays for these applications. Two major features of the program are: (i) a tiling algorithm for the design of short overlapping temperature-matched oligonucleotides of variable length, which are useful for the analysis of single nucleotide polymorphisms and (ii) a set of tools for the analysis of multiple alignments of gene families and related short DNA sequences, which allow for the identification of conserved DNA sequences for PCR primer selection and variable DNA sequences for the selection of unique probes for identification. Note that the program does not address the full genome perspective but, instead, is focused on the genetic analysis of short segments of DNA. The program is Internet-enabled and includes a built-in browser and the automated ability to download sequences from GenBank by specifying the GI number. The program also includes several utilities, including audio recital of a DNA sequence (useful for verifying sequences against a written document), a random sequence generator that provides insight into the relationship between melting temperature and GC content, and a PCR calculator.

  5. An Undergraduate Laboratory Exercise to Study the Effect of Darkness on Plant Gene Expression Using DNA Microarray

    ERIC Educational Resources Information Center

    Chang, Ming-Mei; Briggs, George M.

    2007-01-01

    DNA microarrays are microscopic arrays on a solid surface, typically a glass slide, on which DNA oligonucleotides are deposited or synthesized in a high-density matrix with a predetermined spatial order. Several types of DNA microarrays have been developed and used for various biological studies. Here, we developed an undergraduate laboratory…

  6. Joint DEnKF-albedo assimilation scheme that considers the common land model subgrid heterogeneity and a snow density-based observation operator for improving snow depth simulations

    NASA Astrophysics Data System (ADS)

    Xu, Jianhui; Zhang, Feifei; Zhao, Yi; Shu, Hong; Zhong, Kaiwen

    2016-07-01

    For the large-area snow depth (SD) data sets with high spatial resolution in the Altay region of Northern Xinjiang, China, we present a deterministic ensemble Kalman filter (DEnKF)-albedo assimilation scheme that considers the common land model (CoLM) subgrid heterogeneity. In the albedo assimilation of DEnKF-albedo, the assimilated albedos over each subgrid tile are estimated with the MCD43C1 bidirectional reflectance distribution function (BRDF) parameters product and CoLM calculated solar zenith angle. The BRDF parameters are hypothesized to be consistent over all subgrid tiles within a specified grid. In the SCF assimilation of DEnKF-albedo, a DEnKF combining a snow density-based observation operator considers the effects of the CoLM subgrid heterogeneity and is employed to assimilate MODIS SCF to update SD states over all subgrid tiles. The MODIS SCF over a grid is compared with the area-weighted sum of model predicted SCF over all the subgrid tiles within the grid. The results are validated with in situ SD measurements and AMSR-E product. Compared with the simulations, the DEnKF-albedo scheme can reduce errors of SD simulations and accurately simulate the seasonal variability of SD. Furthermore, it can improve simulations of SD spatiotemporal distribution in the Altay region, which is more accurate and shows more detail than the AMSR-E product.

  7. Global Identification and Characterization of Transcriptionally Active Regions in the Rice Genome

    PubMed Central

    Stolc, Viktor; Deng, Wei; He, Hang; Korbel, Jan; Chen, Xuewei; Tongprasit, Waraporn; Ronald, Pamela; Chen, Runsheng; Gerstein, Mark; Wang Deng, Xing

    2007-01-01

    Genome tiling microarray studies have consistently documented rich transcriptional activity beyond the annotated genes. However, systematic characterization and transcriptional profiling of the putative novel transcripts on the genome scale are still lacking. We report here the identification of 25,352 and 27,744 transcriptionally active regions (TARs) not encoded by annotated exons in the rice (Oryza. sativa) subspecies japonica and indica, respectively. The non-exonic TARs account for approximately two thirds of the total TARs detected by tiling arrays and represent transcripts likely conserved between japonica and indica. Transcription of 21,018 (83%) japonica non-exonic TARs was verified through expression profiling in 10 tissue types using a re-array in which annotated genes and TARs were each represented by five independent probes. Subsequent analyses indicate that about 80% of the japonica TARs that were not assigned to annotated exons can be assigned to various putatively functional or structural elements of the rice genome, including splice variants, uncharacterized portions of incompletely annotated genes, antisense transcripts, duplicated gene fragments, and potential non-coding RNAs. These results provide a systematic characterization of non-exonic transcripts in rice and thus expand the current view of the complexity and dynamics of the rice transcriptome. PMID:17372628

  8. Genome-Wide Survey of Cold Stress Regulated Alternative Splicing in Arabidopsis thaliana with Tiling Microarray

    PubMed Central

    Leviatan, Noam; Alkan, Noam; Leshkowitz, Dena; Fluhr, Robert

    2013-01-01

    Alternative splicing plays a major role in expanding the potential informational content of eukaryotic genomes. It is an important post-transcriptional regulatory mechanism that can increase protein diversity and affect mRNA stability. Alternative splicing is often regulated in a tissue-specific and stress-responsive manner. Cold stress, which adversely affects plant growth and development, regulates the transcription and splicing of plant splicing factors. This can affect the pre-mRNA processing of many genes. To identify cold regulated alternative splicing we applied Affymetrix Arabidopsis tiling arrays to survey the transcriptome under cold treatment conditions. A novel algorithm was used for detection of statistically relevant changes in intron expression within a transcript between control and cold growth conditions. A reverse transcription polymerase chain reaction (RT-PCR) analysis of a number of randomly selected genes confirmed the changes in splicing patterns under cold stress predicted by tiling array. Our analysis revealed new types of cold responsive genes. While their expression level remains relatively unchanged under cold stress their splicing pattern shows detectable changes in the relative abundance of isoforms. The majority of cold regulated alternative splicing introduced a premature termination codon (PTC) into the transcripts creating potential targets for degradation by the nonsense mediated mRNA decay (NMD) process. A number of these genes were analyzed in NMD-defective mutants by RT-PCR and shown to evade NMD. This may result in new and truncated proteins with altered functions or dominant negative effects. The results indicate that cold affects both quantitative and qualitative aspects of gene expression. PMID:23776682

  9. Visible red and infrared light alters gene expression in human marrow stromal fibroblast cells.

    PubMed

    Guo, J; Wang, Q; Wai, D; Zhang, Q Z; Shi, S H; Le, A D; Shi, S T; Yen, S L-K

    2015-04-01

    This study tested whether or not gene expression in human marrow stromal fibroblast (MSF) cells depends on light wavelength and energy density. Primary cultures of isolated human bone marrow stem cells (hBMSC) were exposed to visible red (VR, 633 nm) and infrared (IR, 830 nm) radiation wavelengths from a light emitting diode (LED) over a range of energy densities (0.5, 1.0, 1.5, and 2.0 Joules/cm2) Cultured cells were assayed for cell proliferation, osteogenic potential, adipogenesis, mRNA and protein content. mRNA was analyzed by microarray and compared among different wavelengths and energy densities. Mesenchymal and epithelial cell responses were compared to determine whether responses were cell type specific. Protein array analysis was used to further analyze key pathways identified by microarrays. Different wavelengths and energy densities produced unique sets of genes identified by microarray analysis. Pathway analysis pointed to TGF-beta 1 in the visible red and Akt 1 in the infrared wavelengths as key pathways to study. TGF-beta protein arrays suggested switching from canonical to non-canonical TGF-beta pathways with increases to longer IR wavelengths. Microarrays suggest RANKL and MMP 10 followed IR energy density dose-response curves. Epithelial and mesenchymal cells respond differently to stimulation by light suggesting cell type-specific response is possible. These studies demonstrate differential gene expression with different wavelengths, energy densities and cell types. These differences in gene expression have the potential to be exploited for therapeutic purposes and can help explain contradictory results in the literature when wavelengths, energy densities and cell types differ. © 2015 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.

  10. Reusable conductimetric array of interdigitated microelectrodes for the readout of low-density microarrays.

    PubMed

    Mallén, Maria; Díaz-González, María; Bonilla, Diana; Salvador, Juan P; Marco, María P; Baldi, Antoni; Fernández-Sánchez, César

    2014-06-17

    Low-density protein microarrays are emerging tools in diagnostics whose deployment could be primarily limited by the cost of fluorescence detection schemes. This paper describes an electrical readout system of microarrays comprising an array of gold interdigitated microelectrodes and an array of polydimethylsiloxane microwells, which enabled multiplexed detection of up to thirty six biological events on the same substrate. Similarly to fluorescent readout counterparts, the microarray can be developed on disposable glass slide substrates. However, unlike them, the presented approach is compact and requires a simple and inexpensive instrumentation. The system makes use of urease labeled affinity reagents for developing the microarrays and is based on detection of conductivity changes taking place when ionic species are generated in solution due to the catalytic hydrolysis of urea. The use of a polydimethylsiloxane microwell array facilitates the positioning of the measurement solution on every spot of the microarray. Also, it ensures the liquid tightness and isolation from the surrounding ones during the microarray readout process, thereby avoiding evaporation and chemical cross-talk effects that were shown to affect the sensitivity and reliability of the system. The performance of the system is demonstrated by carrying out the readout of a microarray for boldenone anabolic androgenic steroid hormone. Analytical results are comparable to those obtained by fluorescent scanner detection approaches. The estimated detection limit is 4.0 ng mL(-1), this being below the threshold value set by the World Anti-Doping Agency and the European Community. Copyright © 2014 Elsevier B.V. All rights reserved.

  11. Ceramic tiles with black pigment made from stainless steel plant dust: Physical properties and long-term leaching behavior of heavy metals.

    PubMed

    Zhu, Renbo; Ma, Guojun; Cai, Yongsheng; Chen, Yuxiang; Yang, Tong; Duan, Boyu; Xue, Zhengliang

    2016-04-01

    Stainless steel plant dust is a hazardous by-product of the stainless steelmaking industry. It contains large amounts of Fe, Cr, and Ni, and can be potentially recycled as a raw material of inorganic black pigment in the ceramic industry to reduce environmental contamination and produce value-added products. In this paper, ceramic tiles prepared with black pigment through recycling of stainless steel plant dust were characterized in terms of physical properties, such as bulk density, water absorption, apparent porosity, and volume shrinkage ratio, as well as the long-term leaching behavior of heavy metals (Cr, Ni, Pb, Cd, and Zn). The results show that good physical properties of ceramic tiles can be obtained with 8% pigments addition, sample preparation pressure of 25 MPa, and sintering at 1200 ºC for 30 min. The major controlling leaching mechanism for Cr and Pb from the ceramic tiles is initial surface wash-off, while the leaching behavior of Cd, Ni, and Zn from the stabilized product is mainly controlled by matrix diffusion. The reutilization process is safe and effective to immobilize the heavy metals in the stainless steel plant dust. Stainless steel plant dust is considered as a hazardous material, and it can be potentially recycled for black pigment preparation in the ceramic industry. This paper provides the characteristics of the ceramic tiles with black pigment through recycling stainless steel plant dust, and the long-term leaching behavior and controlling leaching mechanisms of heavy metals from the ceramic tile. The effectiveness of the treatment process is also evaluated.

  12. Association of tumor-infiltrating T-cell density with molecular subtype, racial ancestry and clinical outcomes in prostate cancer.

    PubMed

    Kaur, Harsimar B; Guedes, Liana B; Lu, Jiayun; Maldonado, Laneisha; Reitz, Logan; Barber, John R; De Marzo, Angelo M; Tosoian, Jeffrey J; Tomlins, Scott A; Schaeffer, Edward M; Joshu, Corinne E; Sfanos, Karen S; Lotan, Tamara L

    2018-05-30

    The inflammatory microenvironment plays an important role in the pathogenesis and progression of tumors and may be associated with somatic genomic alterations. We examined the association of tumor-infiltrating T-cell density with clinical-pathologic variables, tumor molecular subtype, and oncologic outcomes in surgically treated primary prostate cancer occurring in patients of European-American or African-American ancestry. We evaluated 312 primary prostate tumors, enriched for patients with African-American ancestry and high grade disease. Tissue microarrays were immunostained for CD3, CD8, and FOXP3 and were previously immunostained for ERG and PTEN using genetically validated protocols. Image analysis for quantification of T-cell density in tissue microarray tumor spots was performed. Automated quantification of T-cell densities in tumor-containing regions of tissue microarray spots and standard histologic sections were correlated (r = 0.73, p < 0.00001) and there was good agreement between visual and automated T-cell density counts on tissue microarray spots (r = 0.93, p < 0.00001). There was a significant correlation between CD3+, CD8+, and FOXP3+ T-cell densities (p < 0.00001), but these were not associated with most clinical or pathologic variables. Increased T-cell density was significantly associated with ERG positivity (median 309 vs. 188 CD3+ T cells/mm 2 ; p = 0.0004) and also with PTEN loss (median 317 vs. 192 CD3+ T cells/mm 2 ; p = 0.001) in the combined cohort of matched European-American and African-American ancestry patients. The same association or a similar trend was present in patients of both ancestries when analyzed separately. When the African-American patients from the matched race set were combined with a separate high grade set of African-American cases, there was a weak association of increased FOXP3+ T-cell densities with increased risk of metastasis in multivariable analysis. Though high T-cell density is associated with specific molecular subclasses of prostate cancer, we did not find an association of T-cell density with racial ancestry.

  13. Temperature-controlled microintaglio printing for high-resolution micropatterning of RNA molecules.

    PubMed

    Kobayashi, Ryo; Biyani, Manish; Ueno, Shingo; Kumal, Subhashini Raj; Kuramochi, Hiromi; Ichiki, Takanori

    2015-05-15

    We have developed an advanced microintaglio printing method for fabricating fine and high-density micropatterns and applied it to the microarraying of RNA molecules. The microintaglio printing of RNA reported here is based on the hybridization of RNA with immobilized complementary DNA probes. The hybridization was controlled by switching the RNA conformation via the temperature, and an RNA microarray with a diameter of 1.5 µm and a density of 40,000 spots/mm(2) with high contrast was successfully fabricated. Specifically, no size effects were observed in the uniformity of patterned signals over a range of microarray feature sizes spanning one order of magnitude. Additionally, we have developed a microintaglio printing method for transcribed RNA microarrays on demand using DNA-immobilized magnetic beads. The beads were arrayed on wells fabricated on a printing mold and the wells were filled with in vitro transcription reagent and sealed with a DNA-immobilized glass substrate. Subsequently, RNA was in situ synthesized using the bead-immobilized DNA as a template and printed onto the substrate via hybridization. Since the microintaglio printing of RNA using DNA-immobilized beads enables the fabrication of a microarray of spots composed of multiple RNA sequences, it will be possible to screen or analyze RNA functions using an RNA microarray fabricated by temperature-controlled microintaglio printing (TC-µIP). Copyright © 2014 Elsevier B.V. All rights reserved.

  14. High Density Lidar and Orthophotography in UXO Wide Area Assessment, Phase 2. Former Camp Beale Demonstration Site. Addendum, Revision 2

    DTIC Science & Technology

    2008-01-01

    the delivery tiles . For the Former Camp Beale site, orthophotos were created in blocks of 2.675 square kilometers, in order to keep file sizes...3-19 3.7.12 Data Density Effects - Orthophotos ....................................................... 3-20 3.7.13 Data... Orthophoto Positional Accuracy ........................................... 3-29 4.0 PERFORMANCE ASSESSMENT

  15. Plasmonic Nanoholes in a Multi-Channel Microarray Format for Parallel Kinetic Assays and Differential Sensing

    PubMed Central

    Im, Hyungsoon; Lesuffleur, Antoine; Lindquist, Nathan C.; Oh, Sang-Hyun

    2009-01-01

    We present nanohole arrays in a gold film integrated with a 6-channel microfluidic chip for parallel measurements of molecular binding kinetics. Surface plasmon resonance effects in the nanohole arrays enable real-time label-free measurements of molecular binding events in each channel, while adjacent negative reference channels can record measurement artifacts such as bulk solution index changes, temperature variations, or changing light absorption in the liquid. Using this platform, streptavidin-biotin specific binding kinetics are measured at various concentrations with negative controls. A high-density microarray of 252 biosensing pixels is also demonstrated with a packing density of 106 sensing elements/cm2, which can potentially be coupled with a massively parallel array of microfluidic channels for protein microarray applications. PMID:19284776

  16. Natural Attenuation of the Persistent Chemical Warfare Agent ...

    EPA Pesticide Factsheets

    Report This project studied the influence of temperature on the natural attenuation of VX from five types of porous/permeable materials: unsealed concrete, plywood, rubber escalator handrail, high density polyethylene (HDPE) plastic, and acoustic ceiling tile.

  17. An alternative method to amplify RNA without loss of signal conservation for expression analysis with a proteinase DNA microarray in the ArrayTube format.

    PubMed

    Schüler, Susann; Wenz, Ingrid; Wiederanders, B; Slickers, P; Ehricht, R

    2006-06-12

    Recent developments in DNA microarray technology led to a variety of open and closed devices and systems including high and low density microarrays for high-throughput screening applications as well as microarrays of lower density for specific diagnostic purposes. Beside predefined microarrays for specific applications manufacturers offer the production of custom-designed microarrays adapted to customers' wishes. Array based assays demand complex procedures including several steps for sample preparation (RNA extraction, amplification and sample labelling), hybridization and detection, thus leading to a high variability between several approaches and resulting in the necessity of extensive standardization and normalization procedures. In the present work a custom designed human proteinase DNA microarray of lower density in ArrayTube format was established. This highly economic open platform only requires standard laboratory equipment and allows the study of the molecular regulation of cell behaviour by proteinases. We established a procedure for sample preparation and hybridization and verified the array based gene expression profile by quantitative real-time PCR (QRT-PCR). Moreover, we compared the results with the well established Affymetrix microarray. By application of standard labelling procedures with e.g. Klenow fragment exo-, single primer amplification (SPA) or In Vitro Transcription (IVT) we noticed a loss of signal conservation for some genes. To overcome this problem we developed a protocol in accordance with the SPA protocol, in which we included target specific primers designed individually for each spotted oligomer. Here we present a complete array based assay in which only the specific transcripts of interest are amplified in parallel and in a linear manner. The array represents a proof of principle which can be adapted to other species as well. As the designed protocol for amplifying mRNA starts from as little as 100 ng total RNA, it presents an alternative method for detecting even low expressed genes by microarray experiments in a highly reproducible and sensitive manner. Preservation of signal integrity is demonstrated out by QRT-PCR measurements. The little amounts of total RNA necessary for the analyses make this method applicable for investigations with limited material as in clinical samples from, for example, organ or tumour biopsies. Those are arguments in favour of the high potential of our assay compared to established procedures for amplification within the field of diagnostic expression profiling. Nevertheless, the screening character of microarray data must be mentioned, and independent methods should verify the results.

  18. Experimental parametric study of servers cooling management in data centers buildings

    NASA Astrophysics Data System (ADS)

    Nada, S. A.; Elfeky, K. E.; Attia, Ali M. A.; Alshaer, W. G.

    2017-06-01

    A parametric study of air flow and cooling management of data centers servers is experimentally conducted for different design conditions. A physical scale model of data center accommodating one rack of four servers was designed and constructed for testing purposes. Front and rear rack and server's temperatures distributions and supply/return heat indices (SHI/RHI) are used to evaluate data center thermal performance. Experiments were conducted to parametrically study the effects of perforated tiles opening ratio, servers power load variation and rack power density. The results showed that (1) perforated tile of 25% opening ratio provides the best results among the other opening ratios, (2) optimum benefit of cold air in servers cooling is obtained at uniformly power loading of servers (3) increasing power density decrease air re-circulation but increase air bypass and servers temperature. The present results are compared with previous experimental and CFD results and fair agreement was found.

  19. Superhydrophilic-Superhydrophobic Patterned Surfaces as High-Density Cell Microarrays: Optimization of Reverse Transfection.

    PubMed

    Ueda, Erica; Feng, Wenqian; Levkin, Pavel A

    2016-10-01

    High-density microarrays can screen thousands of genetic and chemical probes at once in a miniaturized and parallelized manner, and thus are a cost-effective alternative to microwell plates. Here, high-density cell microarrays are fabricated by creating superhydrophilic-superhydrophobic micropatterns in thin, nanoporous polymer substrates such that the superhydrophobic barriers confine both aqueous solutions and adherent cells within each superhydrophilic microspot. The superhydrophobic barriers confine and prevent the mixing of larger droplet volumes, and also control the spreading of droplets independent of the volume, minimizing the variability that arises due to different liquid and surface properties. Using a novel liposomal transfection reagent, ScreenFect A, the method of reverse cell transfection is optimized on the patterned substrates and several factors that affect transfection efficiency and cytotoxicity are identified. Higher levels of transfection are achieved on HOOC- versus NH 2 -functionalized superhydrophilic spots, as well as when gelatin and fibronectin are added to the transfection mixture, while minimizing the amount of transfection reagent improves cell viability. Almost no diffusion of the printed transfection mixtures to the neighboring microspots is detected. Thus, superhydrophilic-superhydrophobic patterned surfaces can be used as cell microarrays and for optimizing reverse cell transfection conditions before performing further cell screenings. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  20. Development of Low Density Flexible Carbon Phenolic Ablators

    NASA Technical Reports Server (NTRS)

    Stackpole, Mairead; Thornton, Jeremy; Fan, Wendy; Agrawal, Parul; Doxtad, Evan; Gasch, Matt

    2011-01-01

    Phenolic Impregnated Carbon Ablator (PICA) was the enabling TPS material for the Stardust mission where it was used as a single piece heatshield. PICA has the advantages of low density (0.27g/cm3) coupled with efficient ablative capability at high heat fluxes. Under the Orion program, PICA was also shown to be capable of both ISS and lunar return missions however some unresolved issues remain for its application in a tiled configuration for the Orion-specific design. In particular, the problem of developing an appropriate gap filler resulted in the Orion program selecting AVCOAT as the primary heatshield material over PICA. We are currently looking at alternative architectures to yield flexible and more conformal carbon phenolic materials with comparable densities to PICA that will address some of the design issues faced in the application of a tiled PICA heat shield. These new materials are viable TPS candidates for upcoming NASA missions and as material candidates for private sector Commercial Orbital Transportation Services (COTS). This presentation will discuss flexible alternatives to PICA and include preliminary mechanical and thermal properties as well as arc jet and LHMEL screening test results.

  1. The developmental transcriptome of Drosophila melanogaster

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    University of Connecticut; Graveley, Brenton R.; Brooks, Angela N.

    Drosophila melanogaster is one of the most well studied genetic model organisms; nonetheless, its genome still contains unannotated coding and non-coding genes, transcripts, exons and RNA editing sites. Full discovery and annotation are pre-requisites for understanding how the regulation of transcription, splicing and RNA editing directs the development of this complex organism. Here we used RNA-Seq, tiling microarrays and cDNA sequencing to explore the transcriptome in 30 distinct developmental stages. We identified 111,195 new elements, including thousands of genes, coding and non-coding transcripts, exons, splicing and editing events, and inferred protein isoforms that previously eluded discovery using established experimental, predictionmore » and conservation-based approaches. These data substantially expand the number of known transcribed elements in the Drosophila genome and provide a high-resolution view of transcriptome dynamics throughout development. Drosophila melanogaster is an important non-mammalian model system that has had a critical role in basic biological discoveries, such as identifying chromosomes as the carriers of genetic information and uncovering the role of genes in development. Because it shares a substantial genic content with humans, Drosophila is increasingly used as a translational model for human development, homeostasis and disease. High-quality maps are needed for all functional genomic elements. Previous studies demonstrated that a rich collection of genes is deployed during the life cycle of the fly. Although expression profiling using microarrays has revealed the expression of, 13,000 annotated genes, it is difficult to map splice junctions and individual base modifications generated by RNA editing using such approaches. Single-base resolution is essential to define precisely the elements that comprise the Drosophila transcriptome. Estimates of the number of transcript isoforms are less accurate than estimates of the number of genes. Whereas, 20% of Drosophila genes are annotated as encoding alternatively spliced premRNAs, splice-junction microarray experiments indicate that this number is at least 40% (ref. 7). Determining the diversity of mRNAs generated by alternative promoters, alternative splicing and RNA editing will substantially increase the inferred protein repertoire. Non-coding RNA genes (ncRNAs) including short interfering RNAs (siRNAs) and microRNAS (miRNAs) (reviewed in ref. 10), and longer ncRNAs such as bxd (ref. 11) and rox (ref. 12), have important roles in gene regulation, whereas others such as small nucleolar RNAs (snoRNAs)and small nuclear RNAs (snRNAs) are important components of macromolecular machines such as the ribosome and spliceosome. The transcription and processing of these ncRNAs must also be fully documented and mapped. As part of the modENCODE project to annotate the functional elements of the D. melanogaster and Caenorhabditis elegans genomes, we used RNA-Seq and tiling microarrays to sample the Drosophila transcriptome at unprecedented depth throughout development from early embryo to ageing male and female adults. We report on a high-resolution view of the discovery, structure and dynamic expression of the D. melanogaster transcriptome.« less

  2. High-density fiber-optic DNA random microsphere array.

    PubMed

    Ferguson, J A; Steemers, F J; Walt, D R

    2000-11-15

    A high-density fiber-optic DNA microarray sensor was developed to monitor multiple DNA sequences in parallel. Microarrays were prepared by randomly distributing DNA probe-functionalized 3.1-microm-diameter microspheres in an array of wells etched in a 500-microm-diameter optical imaging fiber. Registration of the microspheres was performed using an optical encoding scheme and a custom-built imaging system. Hybridization was visualized using fluorescent-labeled DNA targets with a detection limit of 10 fM. Hybridization times of seconds are required for nanomolar target concentrations, and analysis is performed in minutes.

  3. High Density Lidar and Orthophotography in UXO Wide Area Assessment Phase 2. Final Report Addendum for Former Camp Beale Demonstration Site, Revision 2

    DTIC Science & Technology

    2008-01-01

    color balancing, and trimming to the delivery tiles . For the Former Camp Beale site, orthophotos were created in blocks of 2.675 square kilometers, in...3-19 3.7.12 Data Density Effects - Orthophotos ...3-27 3.7.18 Lidar and Orthophoto Positional Accuracy ........................................... 3-29 4.0 PERFORMANCE ASSESSMENT

  4. Estimation of Frost Resistance of the Tile Adhesive on a Cement Based with Application of Amorphous Aluminosilicates as a Modifying Additive

    NASA Astrophysics Data System (ADS)

    Ivanovna Loganina, Valentina; Vladimirovna Zhegera, Christina

    2017-10-01

    In the article given information on the possibility of using amorphous aluminosilicates as a modifying additive in the offered tile cement adhesive. In the article, the data on the preparation of an additive based on amorphous aluminosilicates, on its microstructure and chemical composition. Presented information on the change in the porosity of cement stone when introduced of amorphous aluminosilicates in the his composition. The formulation of a dry building mix on a cement base is proposed with use of an additive based on amorphous aluminosilicates as a modifying additive. Recipe of dry adhesive mixes include Portland cement M400, mineral aggregate in proportion fraction 0.63-0.315:0.315-0.14 respectively 80:20 (%) and filling density of 1538.2 kg/m3, a plasticizer Kratasol, redispersible powder Neolith P4400 and amorphous alumnosilicates. The developed formulation can be used as a tile adhesive for finishing walls of buildings and structure with tiles. Presented results of the evaluation of frost resistance of adhesives based on cement with using of amorphous aluminosilicates as a modifying additive. Installed the mark on the frost resistance of tile glue and frost resistance of the contact zone of adhesive. Established, that the adhesive layer based on developed formulation dry mixture is crack-resistant and frost-resistant for conditions city Penza and dry humidity zone - zone 3 and climatic subarea IIB (accordance with Building codes and regulations 23-01-99Ȋ) cities Russia’s.

  5. Development and validation of a flax (Linum usitatissimum L.) gene expression oligo microarray

    PubMed Central

    2010-01-01

    Background Flax (Linum usitatissimum L.) has been cultivated for around 9,000 years and is therefore one of the oldest cultivated species. Today, flax is still grown for its oil (oil-flax or linseed cultivars) and its cellulose-rich fibres (fibre-flax cultivars) used for high-value linen garments and composite materials. Despite the wide industrial use of flax-derived products, and our actual understanding of the regulation of both wood fibre production and oil biosynthesis more information must be acquired in both domains. Recent advances in genomics are now providing opportunities to improve our fundamental knowledge of these complex processes. In this paper we report the development and validation of a high-density oligo microarray platform dedicated to gene expression analyses in flax. Results Nine different RNA samples obtained from flax inner- and outer-stems, seeds, leaves and roots were used to generate a collection of 1,066,481 ESTs by massive parallel pyrosequencing. Sequences were assembled into 59,626 unigenes and 48,021 sequences were selected for oligo design and high-density microarray (Nimblegen 385K) fabrication with eight, non-overlapping 25-mers oligos per unigene. 18 independent experiments were used to evaluate the hybridization quality, precision, specificity and accuracy and all results confirmed the high technical quality of our microarray platform. Cross-validation of microarray data was carried out using quantitative qRT-PCR. Nine target genes were selected on the basis of microarray results and reflected the whole range of fold change (both up-regulated and down-regulated genes in different samples). A statistically significant positive correlation was obtained comparing expression levels for each target gene across all biological replicates both in qRT-PCR and microarray results. Further experiments illustrated the capacity of our arrays to detect differential gene expression in a variety of flax tissues as well as between two contrasted flax varieties. Conclusion All results suggest that our high-density flax oligo-microarray platform can be used as a very sensitive tool for analyzing gene expression in a large variety of tissues as well as in different cultivars. Moreover, this highly reliable platform can also be used for the quantification of mRNA transcriptional profiling in different flax tissues. PMID:20964859

  6. Development and validation of a flax (Linum usitatissimum L.) gene expression oligo microarray.

    PubMed

    Fenart, Stéphane; Ndong, Yves-Placide Assoumou; Duarte, Jorge; Rivière, Nathalie; Wilmer, Jeroen; van Wuytswinkel, Olivier; Lucau, Anca; Cariou, Emmanuelle; Neutelings, Godfrey; Gutierrez, Laurent; Chabbert, Brigitte; Guillot, Xavier; Tavernier, Reynald; Hawkins, Simon; Thomasset, Brigitte

    2010-10-21

    Flax (Linum usitatissimum L.) has been cultivated for around 9,000 years and is therefore one of the oldest cultivated species. Today, flax is still grown for its oil (oil-flax or linseed cultivars) and its cellulose-rich fibres (fibre-flax cultivars) used for high-value linen garments and composite materials. Despite the wide industrial use of flax-derived products, and our actual understanding of the regulation of both wood fibre production and oil biosynthesis more information must be acquired in both domains. Recent advances in genomics are now providing opportunities to improve our fundamental knowledge of these complex processes. In this paper we report the development and validation of a high-density oligo microarray platform dedicated to gene expression analyses in flax. Nine different RNA samples obtained from flax inner- and outer-stems, seeds, leaves and roots were used to generate a collection of 1,066,481 ESTs by massive parallel pyrosequencing. Sequences were assembled into 59,626 unigenes and 48,021 sequences were selected for oligo design and high-density microarray (Nimblegen 385K) fabrication with eight, non-overlapping 25-mers oligos per unigene. 18 independent experiments were used to evaluate the hybridization quality, precision, specificity and accuracy and all results confirmed the high technical quality of our microarray platform. Cross-validation of microarray data was carried out using quantitative qRT-PCR. Nine target genes were selected on the basis of microarray results and reflected the whole range of fold change (both up-regulated and down-regulated genes in different samples). A statistically significant positive correlation was obtained comparing expression levels for each target gene across all biological replicates both in qRT-PCR and microarray results. Further experiments illustrated the capacity of our arrays to detect differential gene expression in a variety of flax tissues as well as between two contrasted flax varieties. All results suggest that our high-density flax oligo-microarray platform can be used as a very sensitive tool for analyzing gene expression in a large variety of tissues as well as in different cultivars. Moreover, this highly reliable platform can also be used for the quantification of mRNA transcriptional profiling in different flax tissues.

  7. Image microarrays (IMA): Digital pathology's missing tool

    PubMed Central

    Hipp, Jason; Cheng, Jerome; Pantanowitz, Liron; Hewitt, Stephen; Yagi, Yukako; Monaco, James; Madabhushi, Anant; Rodriguez-canales, Jaime; Hanson, Jeffrey; Roy-Chowdhuri, Sinchita; Filie, Armando C.; Feldman, Michael D.; Tomaszewski, John E.; Shih, Natalie NC.; Brodsky, Victor; Giaccone, Giuseppe; Emmert-Buck, Michael R.; Balis, Ulysses J.

    2011-01-01

    Introduction: The increasing availability of whole slide imaging (WSI) data sets (digital slides) from glass slides offers new opportunities for the development of computer-aided diagnostic (CAD) algorithms. With the all-digital pathology workflow that these data sets will enable in the near future, literally millions of digital slides will be generated and stored. Consequently, the field in general and pathologists, specifically, will need tools to help extract actionable information from this new and vast collective repository. Methods: To address this limitation, we designed and implemented a tool (dCORE) to enable the systematic capture of image tiles with constrained size and resolution that contain desired histopathologic features. Results: In this communication, we describe a user-friendly tool that will enable pathologists to mine digital slides archives to create image microarrays (IMAs). IMAs are to digital slides as tissue microarrays (TMAs) are to cell blocks. Thus, a single digital slide could be transformed into an array of hundreds to thousands of high quality digital images, with each containing key diagnostic morphologies and appropriate controls. Current manual digital image cut-and-paste methods that allow for the creation of a grid of images (such as an IMA) of matching resolutions are tedious. Conclusion: The ability to create IMAs representing hundreds to thousands of vetted morphologic features has numerous applications in education, proficiency testing, consensus case review, and research. Lastly, in a manner analogous to the way conventional TMA technology has significantly accelerated in situ studies of tissue specimens use of IMAs has similar potential to significantly accelerate CAD algorithm development. PMID:22200030

  8. Foam on Tile Impact Modeling for the Space Shuttle Program

    NASA Technical Reports Server (NTRS)

    Stellingwerf, R. F.; Robinson, J. H.; Richardson, S.; Evans, S. W.; Stallworth, R.; Hovater, M.

    2003-01-01

    Following the breakup of the Space Shuttle Columbia during reentry a NASA-wide investigation team was formed to examine the probable damage inflicted on Orbiter Thermal Protection System (TPS) elements by impact of External Tank insulating foam projectiles. Our team was to apply rigorous, physics-based analysis techniques to help determine parameters of interest for an experimental test program, utilize validated codes to investigate the full range of impact scenarios, and use analysis derived models to predict aero-thermal-structural responses to entry conditions. We were to operate on a non-interference basis with the j Team, and were to supply significant findings to that team and to the Orbiter Vehicle Engineering Working Group, being responsive to any solicitations for support from these entities. The authors formed a working sub-group within the larger team to apply the Smooth Particle Hydrodynamics code SPHC to the damage estimation problem. Numerical models of the LI-900 TPS tiles and of the BX-250 foam were constructed and used as inputs into the code. Material properties needed to properly model the tiles and foam were obtained from other working sub-groups who performed tests on these items for this purpose. Two- and three- dimensional models of the tiles were constructed, including the glass outer layer, the densified lower layer of LI-900 insulation, the Nomex felt Strain Isolation Pad (SIP) mounting layer, and the underlying aluminum 2024 vehicle skin. A model for the BX-250 foam including porous compression, elastic rebound, and surface erosion was developed. Code results for the tile damage and foam behavior were extensively validated through comparison with the Southwest Research Institute (SwRI) foam-on-tile impact experiments carried out in 1999. These tests involved small projectiles striking individual tiles and small tile arrays. Following code and model validation we simulated impacts of larger ET foam projectiles on the TPS tile systems used on the wings of the orbiter. Tiles used on the Wing Acreage, the Main Landing Gear Door, and the Carrier Panels near the front edge of the wing were modeled. Foam impacts shot for the CAB investigation were modeled, as well as impacts at larger angles, including rapid rotation of the projectile, and with varying foam properties. General results suggest that foam impacts on tiles at about 500 mph could cause appreciable damage if the impact angle is greater than about 20 degrees. Some variations of the foam properties, such as increased brittleness or increased density could increase damage in some cases. Rapid (17 rps) rotation failed to increase the damage for the two cases considered. This does not rule out other cases in which the rotational energy might lead to an increase in tile damage, but suggests that in most cases rotation will not be an important factor. Similar models will be applied for other impacting materials, other velocities, and other geometries as part of the Return to Flight process.

  9. Tunable liquid optics: electrowetting-controlled liquid mirrors based on self-assembled Janus tiles.

    PubMed

    Bucaro, Michael A; Kolodner, Paul R; Taylor, J Ashley; Sidorenko, Alex; Aizenberg, Joanna; Krupenkin, Tom N

    2009-04-09

    In this paper, we describe a tunable, high-reflectivity optofluidic device based on self-assembly of anisotropically functionalized hexagonal micromirrors (Janus tiles) on the surface of an oil droplet to create a concave liquid mirror. The liquid mirror is deposited on a patterned transparent electrode that allows the focal length and axial position to be electrically controlled. The mirror is mechanically robust and retains its integrity even at high levels of vibrational excitation of the interface. The use of reflection instead of refraction overcomes the limited available refractive-index contrast between pairs of density-matched liquids, allowing stronger focusing than is possible for a liquid lens of the same geometry. This approach is compatible with optical instruments that could provide novel functionality-for example, a dynamic 3D projector, i.e., a light source which can scan an image onto a moving, nonplanar focal surface. Janus tiles with complex optical properties can be manufactured using our approach, thus potentially enabling a wide range of novel optical elements.

  10. Tunable liquid optics: electrowetting-controlled liquid mirrors based on self-assembled Janus tiles

    NASA Astrophysics Data System (ADS)

    Krupenkin, Tom; Bucaro, Mike; Kolodner, Paul; Taylor, Ashley; Sidorenko, Alex; Aizenberg, Joanna

    2009-03-01

    In this work we describe a tunable, high-reflectivity optofluidic device based on self-assembly of anisotropically-functionalized hexagonal micromirrors (Janus tiles) on the surface of an oil droplet to create a concave liquid mirror. The liquid mirror is deposited on a patterned transparent electrode that allows the focal length and axial position to be electrically controlled. The mirror is mechanically robust and retains its integrity even at high levels of vibrational excitation of the interface. The use of reflection instead of refraction overcomes the limited available refractive-index contrast between pairs of density-matched liquids, allowing stronger focusing than is possible for a liquid lens of the same geometry. This approach is compatible with optical instruments that could provide novel functionality - for example, a dynamic 3D projector; i.e., a light source which can scan an image onto a moving, non-planar focal surface. Janus tiles with complex optical properties can be manufactured using our approach, thus potentially enabling a wide range of novel optical elements.

  11. Light-weight black ceramic insulation

    NASA Technical Reports Server (NTRS)

    Hsu, Ming-Ta S. (Inventor); Chen, Timothy S. (Inventor)

    2003-01-01

    Ultra-high temperature, light-weight, black ceramic insulation having a density ranging from about 0.12 g/cc. to 0.6 g/cc. such as ceramic tile is obtained by pyrolyzing siloxane gels derived from the reaction of at least one organo dialkoxy silane and at least one tetralkoxy silane in an acid or base liquid medium. The reaction mixture of the tetra- and dialkoxy silanes also may contain an effective amount of a mono- or trialkoxy silane to obtain the siloxane gels. The siloxane gels are dried at ambient temperatures and pressures to form siloxane ceramic precursors without significant shrinkage. The siloxane ceramic precursors are subsequently pyrolyzed, in an inert atmosphere, to form the black ceramic insulation comprising atoms of silicon, carbon and oxygen. The ceramic insulation can be characterized as a porous, uniform ceramic tile resistant to oxidation at temperatures ranging as high as 1700.degree. C., and particularly useful as lightweight tiles for spacecraft and other high-temperature insulation applications.

  12. ARC-1993-A93-0511-7

    NASA Image and Video Library

    1993-10-07

    Harold Goldstein (R) and Dan Leiser (L) discuss bone implant development in the the Shuttle Tile Laboratory N-242. A spin-off of Ames research on both bone density in microgravity and on thermal protection foams is the bone-growth implant shown in 1993.

  13. Tungsten and beryllium armour development for the JET ITER-like wall project

    NASA Astrophysics Data System (ADS)

    Maier, H.; Hirai, T.; Rubel, M.; Neu, R.; Mertens, Ph.; Greuner, H.; Hopf, Ch.; Matthews, G. F.; Neubauer, O.; Piazza, G.; Gauthier, E.; Likonen, J.; Mitteau, R.; Maddaluno, G.; Riccardi, B.; Philipps, V.; Ruset, C.; Lungu, C. P.; Uytdenhouwen, I.; EFDA contributors, JET

    2007-03-01

    For the ITER-like wall project at JET the present main chamber CFC tiles will be exchanged with Be tiles and in parallel a fully tungsten-clad divertor will be prepared. Therefore three R&D programmes were initiated: Be coatings on Inconel as well as Be erosion markers were developed for the first wall of the main chamber. High heat flux screening and cyclic loading tests carried out on the Be coatings on Inconel showed excellent performance, above the required power and energy density. For the divertor a conceptual design for a bulk W horizontal target plate was investigated, with the emphasis on minimizing electromagnetic forces. The design consisted of stacks of W lamellae of 6 mm width that were insulated in the toroidal direction. High heat flux tests of a test module were performed with an electron beam at an absorbed power density up to 9 MW m-2 for more than 150 pulses and finally with increasing power loads leading to surface temperatures in excess of 3000 °C. No macroscopic failure occurred during the test while SEM showed the development of micro-cracks on the loaded surface. For all other divertor parts R&D was performed to provide the technology to coat the 2-directional CFC material used at JET with thin tungsten coatings. The W-coated CFC tiles were subjected to heat loads with power densities ranging up to 23.5 MW m-2 and exposed to cyclic heat loading for 200 pulses at 10.5 MW m-2. All coatings developed cracks perpendicular to the CFC fibres due to the stronger contraction of the coating upon cool-down after the heat pulses.

  14. Broad spectrum microarray for fingerprint-based bacterial species identification

    PubMed Central

    2010-01-01

    Background Microarrays are powerful tools for DNA-based molecular diagnostics and identification of pathogens. Most target a limited range of organisms and are based on only one or a very few genes for specific identification. Such microarrays are limited to organisms for which specific probes are available, and often have difficulty discriminating closely related taxa. We have developed an alternative broad-spectrum microarray that employs hybridisation fingerprints generated by high-density anonymous markers distributed over the entire genome for identification based on comparison to a reference database. Results A high-density microarray carrying 95,000 unique 13-mer probes was designed. Optimized methods were developed to deliver reproducible hybridisation patterns that enabled confident discrimination of bacteria at the species, subspecies, and strain levels. High correlation coefficients were achieved between replicates. A sub-selection of 12,071 probes, determined by ANOVA and class prediction analysis, enabled the discrimination of all samples in our panel. Mismatch probe hybridisation was observed but was found to have no effect on the discriminatory capacity of our system. Conclusions These results indicate the potential of our genome chip for reliable identification of a wide range of bacterial taxa at the subspecies level without laborious prior sequencing and probe design. With its high resolution capacity, our proof-of-principle chip demonstrates great potential as a tool for molecular diagnostics of broad taxonomic groups. PMID:20163710

  15. Evaluation of a low density DNA microarray for small B-cell non-Hodgkin lymphoma differential diagnosis.

    PubMed

    Gillet, Jean-Pierre; Molina, Thierry Jo; Jamart, Jacques; Gaulard, Philippe; Leroy, Karen; Briere, Josette; Theate, Ivan; Thieblemont, Catherine; Bosly, Andre; Herin, Michel; Hamels, Jacques; Remacle, Jose

    2009-03-01

    Lymphomas are classified according to the World Health Organisation (WHO) classification which defines subtypes on the basis of clinical, morphological, immunophenotypic, molecular and cytogenetic criteria. Differential diagnosis of the subtypes is sometimes difficult, especially for small B-cell lymphoma (SBCL). Standardisation of molecular genetic assays using multiple gene expression analysis by microarrays could be a useful complement to the current diagnosis. The aim of the present study was to develop a low density DNA microarray for the analysis of 107 genes associated with B-cell non-Hodgkin lymphoma and to evaluate its performance in the diagnosis of SBCL. A predictive tool based on Fisher discriminant analysis using a training set of 40 patients including four different subtypes (follicular lymphoma n = 15, mantle cell lymphoma n = 7, B-cell chronic lymphocytic leukemia n = 6 and splenic marginal zone lymphoma n = 12) was designed. A short additional preliminary analysis to gauge the accuracy of this signature was then performed on an external set of nine patients. Using this model, eight of nine of those samples were classified successfully. This pilot study demonstrates that such a microarray tool may be a promising diagnostic approach for small B-cell non-Hodgkin lymphoma.

  16. Functionalization of poly(methyl methacrylate) (PMMA) as a substrate for DNA microarrays

    PubMed Central

    Fixe, F.; Dufva, M.; Telleman, P.; Christensen, C. B. V.

    2004-01-01

    A chemical procedure was developed to functionalize poly(methyl methacrylate) (PMMA) substrates. PMMA is reacted with hexamethylene diamine to yield an aminated surface for immobilizing DNA in microarrays. The density of primary NH2 groups was 0.29 nmol/cm2. The availability of these primary amines was confirmed by the immobilization of DNA probes and hybridization with a complementary DNA strand. The hybridization signal and the hybridization efficiency of the chemically aminated PMMA slides were comparable to the hybridization signal and the hybridization efficiency obtained from differently chemically modified PMMA slides, silanized glass, commercial silylated glass and commercial plastic Euray™ slides. Immobilized and hybridized densities of 10 and 0.75 pmol/cm2, respectively, were observed for microarrays on chemically aminated PMMA. The immobilized probes were heat stable since the hybridization performance of microarrays subjected to 20 PCR heat cycles was only reduced by 4%. In conclusion, this new strategy to modify PMMA provides a robust procedure to immobilize DNA, which is a very useful substrate for fabricating single use diagnostics devices with integrated functions, like sample preparation, treatment and detection using microfabrication and microelectronic techniques. PMID:14718554

  17. Analysis of population structure and genetic history of cattle breeds based on high-density SNP data

    USDA-ARS?s Scientific Manuscript database

    Advances in single nucleotide polymorphism (SNP) genotyping microarrays have facilitated a new understanding of population structure and evolutionary history for several species. Most existing studies in livestock were based on low density SNP arrays. The first wave of low density SNP studies on cat...

  18. A microarray-based genotyping and genetic mapping approach for highly heterozygous outcrossing species enables localization of a large fraction of the unassembled Populus trichocarpa genome sequence.

    PubMed

    Drost, Derek R; Novaes, Evandro; Boaventura-Novaes, Carolina; Benedict, Catherine I; Brown, Ryan S; Yin, Tongming; Tuskan, Gerald A; Kirst, Matias

    2009-06-01

    Microarrays have demonstrated significant power for genome-wide analyses of gene expression, and recently have also revolutionized the genetic analysis of segregating populations by genotyping thousands of loci in a single assay. Although microarray-based genotyping approaches have been successfully applied in yeast and several inbred plant species, their power has not been proven in an outcrossing species with extensive genetic diversity. Here we have developed methods for high-throughput microarray-based genotyping in such species using a pseudo-backcross progeny of 154 individuals of Populus trichocarpa and P. deltoides analyzed with long-oligonucleotide in situ-synthesized microarray probes. Our analysis resulted in high-confidence genotypes for 719 single-feature polymorphism (SFP) and 1014 gene expression marker (GEM) candidates. Using these genotypes and an established microsatellite (SSR) framework map, we produced a high-density genetic map comprising over 600 SFPs, GEMs and SSRs. The abundance of gene-based markers allowed us to localize over 35 million base pairs of previously unplaced whole-genome shotgun (WGS) scaffold sequence to putative locations in the genome of P. trichocarpa. A high proportion of sampled scaffolds could be verified for their placement with independently mapped SSRs, demonstrating the previously un-utilized power that high-density genotyping can provide in the context of map-based WGS sequence reassembly. Our results provide a substantial contribution to the continued improvement of the Populus genome assembly, while demonstrating the feasibility of microarray-based genotyping in a highly heterozygous population. The strategies presented are applicable to genetic mapping efforts in all plant species with similarly high levels of genetic diversity.

  19. Experimental study of a very high frequency, 162 MHz, segmented electrode, capacitively coupled plasma discharge

    NASA Astrophysics Data System (ADS)

    Sirse, Nishant; Harvey, Cleo; Gaman, Cezar; Ellingboe, Bert

    2016-09-01

    Radio-frequency capacitively coupled plasma (CCP) discharge operating at a very high frequency, 30-300 MHz, offers many advantages over standard 13.56 MHz CCP. However, there is a limited flexibility on the choice of driving frequency and substrate size due to plasma non-uniformity caused by the standing wave effect and edge effect. To overcome this issue segmented electrode CCP's are proposed and researched. Despite its numerous advantages the power coupling mechanism and plasma chemistry in this type of discharge are not fully understood due to lack of experimental data. In this paper, we present the experimental study of a segmented electrode, 3x4 tile array (10x10 cm square tile with 1 cm tile-to-tile separation), CCP discharge driven at 162 MHz. We measured plasma uniformity and gas temperature using hairpin probe and optical emission spectroscopy respectively. A homemade RF compensated Langmuir probe is employed to measure the Electron Energy Distribution Function (EEDF) by second harmonic technique. Energy resolved quadrupole mass spectrometer is utilized to measure the ion energy distribution. Discharge/plasma properties are investigated for several operating conditions and for power coupling mode in both washer board and checker board configuration. The experimental results show that the uniform plasma density can be maintained over a large area along with highly non-equilibrium condition to produce unique gas phase plasma chemistry.

  20. K-Band Phased Array Developed for Low- Earth-Orbit Satellite Communications

    NASA Technical Reports Server (NTRS)

    Anzic, Godfrey

    1999-01-01

    Future rapid deployment of low- and medium-Earth-orbit satellite constellations that will offer various narrow- to wide-band wireless communications services will require phased-array antennas that feature wide-angle and superagile electronic steering of one or more antenna beams. Antennas, which employ monolithic microwave integrated circuits (MMIC), are perfectly suited for this application. Under a cooperative agreement, an MMIC-based, K-band phased-array antenna is being developed with 50/50 cost sharing by the NASA Lewis Research Center and Raytheon Systems Company. The transmitting array, which will operate at 19 gigahertz (GHz), is a state-of-the-art design that features dual, independent, electronically steerable beam operation ( 42 ), a stand-alone thermal management, and a high-density tile architecture. This array can transmit 622 megabits per second (Mbps) in each beam from Earth orbit to small Earth terminals. The weight of the total array package is expected to be less than 8 lb. The tile integration technology (flip chip MMIC tile) chosen for this project represents a major advancement in phased-array engineering and holds much promise for reducing manufacturing costs.

  1. Power handling of a segmented bulk W tile for JET under realistic plasma scenarios

    NASA Astrophysics Data System (ADS)

    Jet-Efda Contributors Mertens, Ph.; Coenen, J. W.; Eich, T.; Huber, A.; Jachmich, S.; Nicolai, D.; Riccardo, V.; Senik, K.; Samm, U.

    2011-08-01

    A solid tungsten divertor row has been designed for JET in the frame of the ITER-like Wall project (ILW). The plasma-facing tiles are segmented in four stacks of tungsten lamellae oriented in the toroidal direction. Earlier estimations of the expected tile performance were carried out mostly for engineering purposes, to compare the permissible heat load with the power density of 7 MW/m2 originally specified for the ILW as a uniform load for 10 s.The global thermal model developed for the W modules delivers results for more realistic plasma footprints: the poloidal extension of the outer strike point was reduced from the full lamella width of 62 mm to ⩾15 mm. Model validation is given by the experimental exposure of a 1:1 prototype stack in the ion beam facility MARION (incidence ˜6°, load E ⩽ 66 MJ/m2 on the wetted surface). Spreading the deposited energy by appropriate sweeping over one or several stacks in the torus is beneficial for the tungsten lamellae and for the support structure.

  2. Properties of plane discrete Poisson-Voronoi tessellations on triangular tiling formed by the Kolmogorov-Johnson-Mehl-Avrami growth of triangular islands

    NASA Astrophysics Data System (ADS)

    Korobov, A.

    2011-08-01

    Discrete uniform Poisson-Voronoi tessellations of two-dimensional triangular tilings resulting from the Kolmogorov-Johnson-Mehl-Avrami (KJMA) growth of triangular islands have been studied. This shape of tiles and islands, rarely considered in the field of random tessellations, is prompted by the birth-growth process of Ir(210) faceting. The growth mode determines a triangular metric different from the Euclidean metric. Kinetic characteristics of tessellations appear to be metric sensitive, in contrast to area distributions. The latter have been studied for the variant of nuclei growth to the first impingement in addition to the conventional case of complete growth. Kiang conjecture works in both cases. The averaged number of neighbors is six for all studied densities of random tessellations, but neighbors appear to be mainly different in triangular and Euclidean metrics. Also, the applicability of the obtained results for simulating birth-growth processes when the 2D nucleation and impingements are combined with the 3D growth in the particular case of similar shape and the same orientation of growing nuclei is briefly discussed.

  3. Properties of plane discrete Poisson-Voronoi tessellations on triangular tiling formed by the Kolmogorov-Johnson-Mehl-Avrami growth of triangular islands.

    PubMed

    Korobov, A

    2011-08-01

    Discrete uniform Poisson-Voronoi tessellations of two-dimensional triangular tilings resulting from the Kolmogorov-Johnson-Mehl-Avrami (KJMA) growth of triangular islands have been studied. This shape of tiles and islands, rarely considered in the field of random tessellations, is prompted by the birth-growth process of Ir(210) faceting. The growth mode determines a triangular metric different from the Euclidean metric. Kinetic characteristics of tessellations appear to be metric sensitive, in contrast to area distributions. The latter have been studied for the variant of nuclei growth to the first impingement in addition to the conventional case of complete growth. Kiang conjecture works in both cases. The averaged number of neighbors is six for all studied densities of random tessellations, but neighbors appear to be mainly different in triangular and Euclidean metrics. Also, the applicability of the obtained results for simulating birth-growth processes when the 2D nucleation and impingements are combined with the 3D growth in the particular case of similar shape and the same orientation of growing nuclei is briefly discussed.

  4. Feasibility and process scale-up low cost alumina fibers for advanced Re-usable Surface Insulation (RSI)

    NASA Technical Reports Server (NTRS)

    Pearson, A.

    1975-01-01

    The objective of this program was to establish feasibility of a process to produce low cost aluminum oxide fibers having sufficient strength, flexibility, and thermal stability for multiple re-use at temperatures to 1480 C in advanced RSI type heat shields for reentry vehicles. Using bench-scale processing apparatus, the Alcoa 'Saphiber' process was successfully modified to produce nominally 8 microns diameter polycrystalline alpha-alumina fiber. Thermal stability was demonstrated in vacuum reheating tests to 1371 C and in atmospheric reheating to 1483 C. Individual fiber properties of strength, modulus, and flexibility were not determined because of friability and short length of the fiber. Rigidized tile produced from fiber of nominally 8, 20 and 40 micron diameter had thermal conductivities significantly higher than those of RSI SiO2 or mullite at relatively low temperature but became comparable above about 1000 C. Tile densities were high due to short fiber length, especially in the coarser diameter fiber. No significant effect of fiber diameter on thermal properties could be determined form the data. Mechanical properties of tiles deteriorated as fiber diameter increased.

  5. Test of 1D carbon-carbon composite prototype tiles for the SPIDER diagnostic calorimeter

    NASA Astrophysics Data System (ADS)

    Serianni, G.; Pimazzoni, A.; Canton, A.; Palma, M. Dalla; Delogu, R.; Fasolo, D.; Franchin, L.; Pasqualotto, R.; Tollin, M.

    2017-08-01

    Additional heating will be provided to the thermonuclear fusion experiment ITER by injection of neutral beams from accelerated negative ions. In the SPIDER test facility, under construction at Consorzio RFX in Padova (Italy), the production of negative ions will be studied and optimised. To this purpose the STRIKE (Short-Time Retractable Instrumented Kalorimeter Experiment) diagnostic will be used to characterise the SPIDER beam during short operation (several seconds) and to verify if the beam meets the ITER requirement regarding the maximum allowed beam non-uniformity (below ±10%). The most important measurements performed by STRIKE are beam uniformity, beamlet divergence and stripping losses. The major components of STRIKE are 16 1D-CFC (Carbon matrix-Carbon Fibre reinforced Composite) tiles, observed at the rear side by a thermal camera. The requirements of the 1D CFC material include a large thermal conductivity along the tile thickness (at least 10 times larger than in the other directions); low specific heat and density; uniform parameters over the tile surface; capability to withstand localised heat loads resulting in steep temperature gradients. So 1D CFC is a very anisotropic and delicate material, not commercially available, and prototypes are being specifically realised. This contribution gives an overview of the tests performed on the CFC prototype tiles, aimed at verifying their thermal behaviour. The spatial uniformity of the parameters and the ratio between the thermal conductivities are assessed by means of a power laser at Consorzio RFX. Dedicated linear and non-linear simulations are carried out to interpret the experiments and to estimate the thermal conductivities; these simulations are described and a comparison of the experimental data with the simulation results is presented.

  6. Diatoms as an indicator for tile drainage flow in a German lowland catchment.

    PubMed

    Wu, Naicheng; Faber, Claas; Ulrich, Uta; Fohrer, Nicola

    2018-01-01

    The separation of runoff components within a model simulation is of great importance for a successful implementation of management measures. Diatoms could be a promising indicator for tile drainage flow due to their diverse preferences to different aquatic habitats. In this study, we collected diatom samples of 9 sites (4 tile drainage, TD, and 5 river sites, Ri) in a German lowland catchment at a weekly or biweekly time step from March to July 2013 with the aim of testing the suitability of diatoms for tile drainage flow, which is typical for lowland catchment. Planothidium lanceolatum , Ulnaria biceps , and Navicula gregaria dominated in TD sites with relative abundances of 22.2, 21.5, and 10.9%, respectively. For Ri sites, the most abundant species was Navicula lanceolata (20.5%), followed by Ulnaria biceps (12.9%), Cyclotella meneghiniana (9.5%), and Planothidium lanceolatum (9.3%). Compared with Ri sites, TD had a lower diatom density, biomass, species richness, and percentage of Aquatic/Riparian diatoms (AqRi%). However, the proportion of Riparian diatoms (RiZo%) increased at TD. Indicator value method (IndVal) revealed that the two groups (Ri and TD) were characterized by different indicator species. Fifteen taxa, including Cocconeis placentula , Cyclotella meneghiniana , N. lanceolata , and U. biceps , were significant indicators for Ri sites. Planothidium lanceolatum , Achnanthidium minutissimum , and Navicula gregaria were significant indicators for TD sites. A pronounced variation was found in the species lists of diatom community between Ri and TD water body types associated with different indicator species. With respect to hydrograph separation, these findings highlight the suitability of diatoms as an indicator for tile drainage flow. However, spatial and temporal variations of diatoms should be considered in future surveys.

  7. Programmable DNA tile self-assembly using a hierarchical sub-tile strategy.

    PubMed

    Shi, Xiaolong; Lu, Wei; Wang, Zhiyu; Pan, Linqiang; Cui, Guangzhao; Xu, Jin; LaBean, Thomas H

    2014-02-21

    DNA tile based self-assembly provides a bottom-up approach to construct desired nanostructures. DNA tiles have been directly constructed from ssDNA and readily self-assembled into 2D lattices and 3D superstructures. However, for more complex lattice designs including algorithmic assemblies requiring larger tile sets, a more modular approach could prove useful. This paper reports a new DNA 'sub-tile' strategy to easily create whole families of programmable tiles. Here, we demonstrate the stability and flexibility of our sub-tile structures by constructing 3-, 4- and 6-arm DNA tiles that are subsequently assembled into 2D lattices and 3D nanotubes according to a hierarchical design. Assembly of sub-tiles, tiles, and superstructures was analyzed using polyacrylamide gel electrophoresis and atomic force microscopy. DNA tile self-assembly methods provide a bottom-up approach to create desired nanostructures; the sub-tile strategy adds a useful new layer to this technique. Complex units can be made from simple parts. The sub-tile approach enables the rapid redesign and prototyping of complex DNA tile sets and tiles with asymmetric designs.

  8. Identification of Genome-Wide Mutations in Ciprofloxacin-Resistant F. tularensis LVS Using Whole Genome Tiling Arrays and Next Generation Sequencing

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Jaing, Crystal J.; McLoughlin, Kevin S.; Thissen, James B.

    Francisella tularensis is classified as a Class A bioterrorism agent by the U.S. government due to its high virulence and the ease with which it can be spread as an aerosol. It is a facultative intracellular pathogen and the causative agent of tularemia. Ciprofloxacin (Cipro) is a broad spectrum antibiotic effective against Gram-positive and Gram-negative bacteria. Increased Cipro resistance in pathogenic microbes is of serious concern when considering options for medical treatment of bacterial infections. Identification of genes and loci that are associated with Ciprofloxacin resistance will help advance the understanding of resistance mechanisms and may, in the future, providemore » better treatment options for patients. It may also provide information for development of assays that can rapidly identify Cipro-resistant isolates of this pathogen. In this study, we then selected a large number of F. tularensis live vaccine strain (LVS) isolates that survived in progressively higher Ciprofloxacin concentrations, screened the isolates using a whole genome F. tularensis LVS tiling microarray and Illumina sequencing, and identified both known and novel mutations associated with resistance. For genes containing mutations encode DNA gyrase subunit A, a hypothetical protein, an asparagine synthase, a sugar transamine/perosamine synthetase and others. Finally, structural modeling performed on these proteins provides insights into the potential function of these proteins and how they might contribute to Cipro resistance mechanisms.« less

  9. Identification of Genome-Wide Mutations in Ciprofloxacin-Resistant F. tularensis LVS Using Whole Genome Tiling Arrays and Next Generation Sequencing

    DOE PAGES

    Jaing, Crystal J.; McLoughlin, Kevin S.; Thissen, James B.; ...

    2016-09-26

    Francisella tularensis is classified as a Class A bioterrorism agent by the U.S. government due to its high virulence and the ease with which it can be spread as an aerosol. It is a facultative intracellular pathogen and the causative agent of tularemia. Ciprofloxacin (Cipro) is a broad spectrum antibiotic effective against Gram-positive and Gram-negative bacteria. Increased Cipro resistance in pathogenic microbes is of serious concern when considering options for medical treatment of bacterial infections. Identification of genes and loci that are associated with Ciprofloxacin resistance will help advance the understanding of resistance mechanisms and may, in the future, providemore » better treatment options for patients. It may also provide information for development of assays that can rapidly identify Cipro-resistant isolates of this pathogen. In this study, we then selected a large number of F. tularensis live vaccine strain (LVS) isolates that survived in progressively higher Ciprofloxacin concentrations, screened the isolates using a whole genome F. tularensis LVS tiling microarray and Illumina sequencing, and identified both known and novel mutations associated with resistance. For genes containing mutations encode DNA gyrase subunit A, a hypothetical protein, an asparagine synthase, a sugar transamine/perosamine synthetase and others. Finally, structural modeling performed on these proteins provides insights into the potential function of these proteins and how they might contribute to Cipro resistance mechanisms.« less

  10. High-Density Droplet Microarray of Individually Addressable Electrochemical Cells.

    PubMed

    Zhang, Huijie; Oellers, Tobias; Feng, Wenqian; Abdulazim, Tarik; Saw, En Ning; Ludwig, Alfred; Levkin, Pavel A; Plumeré, Nicolas

    2017-06-06

    Microarray technology has shown great potential for various types of high-throughput screening applications. The main read-out methods of most microarray platforms, however, are based on optical techniques, limiting the scope of potential applications of such powerful screening technology. Electrochemical methods possess numerous complementary advantages over optical detection methods, including its label-free nature, capability of quantitative monitoring of various reporter molecules, and the ability to not only detect but also address compositions of individual compartments. However, application of electrochemical methods for the purpose of high-throughput screening remains very limited. In this work, we develop a high-density individually addressable electrochemical droplet microarray (eDMA). The eDMA allows for the detection of redox-active reporter molecules irrespective of their electrochemical reversibility in individual nanoliter-sized droplets. Orthogonal band microelectrodes are arranged to form at their intersections an array of three-electrode systems for precise control of the applied potential, which enables direct read-out of the current related to analyte detection. The band microelectrode array is covered with a layer of permeable porous polymethacrylate functionalized with a highly hydrophobic-hydrophilic pattern, forming spatially separated nanoliter-sized droplets on top of each electrochemical cell. Electrochemical characterization of single droplets demonstrates that the underlying electrode system is accessible to redox-active molecules through the hydrophilic polymeric pattern and that the nonwettable hydrophobic boundaries can spatially separate neighboring cells effectively. The eDMA technology opens the possibility to combine the high-throughput biochemical or living cell screenings using the droplet microarray platform with the sequential electrochemical read-out of individual droplets.

  11. A probabilistic framework for microarray data analysis: fundamental probability models and statistical inference.

    PubMed

    Ogunnaike, Babatunde A; Gelmi, Claudio A; Edwards, Jeremy S

    2010-05-21

    Gene expression studies generate large quantities of data with the defining characteristic that the number of genes (whose expression profiles are to be determined) exceed the number of available replicates by several orders of magnitude. Standard spot-by-spot analysis still seeks to extract useful information for each gene on the basis of the number of available replicates, and thus plays to the weakness of microarrays. On the other hand, because of the data volume, treating the entire data set as an ensemble, and developing theoretical distributions for these ensembles provides a framework that plays instead to the strength of microarrays. We present theoretical results that under reasonable assumptions, the distribution of microarray intensities follows the Gamma model, with the biological interpretations of the model parameters emerging naturally. We subsequently establish that for each microarray data set, the fractional intensities can be represented as a mixture of Beta densities, and develop a procedure for using these results to draw statistical inference regarding differential gene expression. We illustrate the results with experimental data from gene expression studies on Deinococcus radiodurans following DNA damage using cDNA microarrays. Copyright (c) 2010 Elsevier Ltd. All rights reserved.

  12. Measuring Sister Chromatid Cohesion Protein Genome Occupancy in Drosophila melanogaster by ChIP-seq.

    PubMed

    Dorsett, Dale; Misulovin, Ziva

    2017-01-01

    This chapter presents methods to conduct and analyze genome-wide chromatin immunoprecipitation of the cohesin complex and the Nipped-B cohesin loading factor in Drosophila cells using high-throughput DNA sequencing (ChIP-seq). Procedures for isolation of chromatin, immunoprecipitation, and construction of sequencing libraries for the Ion Torrent Proton high throughput sequencer are detailed, and computational methods to calculate occupancy as input-normalized fold-enrichment are described. The results obtained by ChIP-seq are compared to those obtained by ChIP-chip (genomic ChIP using tiling microarrays), and the effects of sequencing depth on the accuracy are analyzed. ChIP-seq provides similar sensitivity and reproducibility as ChIP-chip, and identifies the same broad regions of occupancy. The locations of enrichment peaks, however, can differ between ChIP-chip and ChIP-seq, and low sequencing depth can splinter broad regions of occupancy into distinct peaks.

  13. Impacts of Space Shuttle thermal protection system tile on F-15 aircraft vertical tile

    NASA Technical Reports Server (NTRS)

    Ko, W. L.

    1985-01-01

    Impacts of the space shuttle thermal protection system (TPS) tile on the leading edge and the side of the vertical tail of the F-15 aircraft were analyzed under different TPS tile orientations. The TPS tile-breaking tests were conducted to simulate the TPS tile impacts. It was found that the predicted tile impact forces compare fairly well with the tile-breaking forces, and the impact forces exerted on the F-15 aircraft vertical tail were relatively low because a very small fraction of the tile kinetic energy was dissipated in the impact, penetration, and fracture of the tile. It was also found that the oblique impact of the tile on the side of the F-15 aircraft vertical tail was unlikely to dent the tail surface.

  14. Towards High-throughput Immunomics for Infectious Diseases: Use of Next-generation Peptide Microarrays for Rapid Discovery and Mapping of Antigenic Determinants*

    PubMed Central

    Carmona, Santiago J.; Nielsen, Morten; Schafer-Nielsen, Claus; Mucci, Juan; Altcheh, Jaime; Balouz, Virginia; Tekiel, Valeria; Frasch, Alberto C.; Campetella, Oscar; Buscaglia, Carlos A.; Agüero, Fernán

    2015-01-01

    Complete characterization of antibody specificities associated to natural infections is expected to provide a rich source of serologic biomarkers with potential applications in molecular diagnosis, follow-up of chemotherapeutic treatments, and prioritization of targets for vaccine development. Here, we developed a highly-multiplexed platform based on next-generation high-density peptide microarrays to map these specificities in Chagas Disease, an exemplar of a human infectious disease caused by the protozoan Trypanosoma cruzi. We designed a high-density peptide microarray containing more than 175,000 overlapping 15mer peptides derived from T. cruzi proteins. Peptides were synthesized in situ on microarray slides, spanning the complete length of 457 parasite proteins with fully overlapped 15mers (1 residue shift). Screening of these slides with antibodies purified from infected patients and healthy donors demonstrated both a high technical reproducibility as well as epitope mapping consistency when compared with earlier low-throughput technologies. Using a conservative signal threshold to classify positive (reactive) peptides we identified 2,031 disease-specific peptides and 97 novel parasite antigens, effectively doubling the number of known antigens and providing a 10-fold increase in the number of fine mapped antigenic determinants for this disease. Finally, further analysis of the chip data showed that optimizing the amount of sequence overlap of displayed peptides can increase the protein space covered in a single chip by at least ∼threefold without sacrificing sensitivity. In conclusion, we show the power of high-density peptide chips for the discovery of pathogen-specific linear B-cell epitopes from clinical samples, thus setting the stage for high-throughput biomarker discovery screenings and proteome-wide studies of immune responses against pathogens. PMID:25922409

  15. Towards High-throughput Immunomics for Infectious Diseases: Use of Next-generation Peptide Microarrays for Rapid Discovery and Mapping of Antigenic Determinants.

    PubMed

    Carmona, Santiago J; Nielsen, Morten; Schafer-Nielsen, Claus; Mucci, Juan; Altcheh, Jaime; Balouz, Virginia; Tekiel, Valeria; Frasch, Alberto C; Campetella, Oscar; Buscaglia, Carlos A; Agüero, Fernán

    2015-07-01

    Complete characterization of antibody specificities associated to natural infections is expected to provide a rich source of serologic biomarkers with potential applications in molecular diagnosis, follow-up of chemotherapeutic treatments, and prioritization of targets for vaccine development. Here, we developed a highly-multiplexed platform based on next-generation high-density peptide microarrays to map these specificities in Chagas Disease, an exemplar of a human infectious disease caused by the protozoan Trypanosoma cruzi. We designed a high-density peptide microarray containing more than 175,000 overlapping 15 mer peptides derived from T. cruzi proteins. Peptides were synthesized in situ on microarray slides, spanning the complete length of 457 parasite proteins with fully overlapped 15 mers (1 residue shift). Screening of these slides with antibodies purified from infected patients and healthy donors demonstrated both a high technical reproducibility as well as epitope mapping consistency when compared with earlier low-throughput technologies. Using a conservative signal threshold to classify positive (reactive) peptides we identified 2,031 disease-specific peptides and 97 novel parasite antigens, effectively doubling the number of known antigens and providing a 10-fold increase in the number of fine mapped antigenic determinants for this disease. Finally, further analysis of the chip data showed that optimizing the amount of sequence overlap of displayed peptides can increase the protein space covered in a single chip by at least ∼ threefold without sacrificing sensitivity. In conclusion, we show the power of high-density peptide chips for the discovery of pathogen-specific linear B-cell epitopes from clinical samples, thus setting the stage for high-throughput biomarker discovery screenings and proteome-wide studies of immune responses against pathogens. © 2015 by The American Society for Biochemistry and Molecular Biology, Inc.

  16. A high-density transcript linkage map with 1,845 expressed genes positioned by microarray-based Single Feature Polymorphisms (SFP) in Eucalyptus

    PubMed Central

    2011-01-01

    Background Technological advances are progressively increasing the application of genomics to a wider array of economically and ecologically important species. High-density maps enriched for transcribed genes facilitate the discovery of connections between genes and phenotypes. We report the construction of a high-density linkage map of expressed genes for the heterozygous genome of Eucalyptus using Single Feature Polymorphism (SFP) markers. Results SFP discovery and mapping was achieved using pseudo-testcross screening and selective mapping to simultaneously optimize linkage mapping and microarray costs. SFP genotyping was carried out by hybridizing complementary RNA prepared from 4.5 year-old trees xylem to an SFP array containing 103,000 25-mer oligonucleotide probes representing 20,726 unigenes derived from a modest size expressed sequence tags collection. An SFP-mapping microarray with 43,777 selected candidate SFP probes representing 15,698 genes was subsequently designed and used to genotype SFPs in a larger subset of the segregating population drawn by selective mapping. A total of 1,845 genes were mapped, with 884 of them ordered with high likelihood support on a framework map anchored to 180 microsatellites with average density of 1.2 cM. Using more probes per unigene increased by two-fold the likelihood of detecting segregating SFPs eventually resulting in more genes mapped. In silico validation showed that 87% of the SFPs map to the expected location on the 4.5X draft sequence of the Eucalyptus grandis genome. Conclusions The Eucalyptus 1,845 gene map is the most highly enriched map for transcriptional information for any forest tree species to date. It represents a major improvement on the number of genes previously positioned on Eucalyptus maps and provides an initial glimpse at the gene space for this global tree genome. A general protocol is proposed to build high-density transcript linkage maps in less characterized plant species by SFP genotyping with a concurrent objective of reducing microarray costs. HIgh-density gene-rich maps represent a powerful resource to assist gene discovery endeavors when used in combination with QTL and association mapping and should be especially valuable to assist the assembly of reference genome sequences soon to come for several plant and animal species. PMID:21492453

  17. Characterization of Bovine Serum Albumin Blocking Efficiency on Epoxy-Functionalized Substrates for Microarray Applications.

    PubMed

    Sun, Yung-Shin; Zhu, Xiangdong

    2016-10-01

    Microarrays provide a platform for high-throughput characterization of biomolecular interactions. To increase the sensitivity and specificity of microarrays, surface blocking is required to minimize the nonspecific interactions between analytes and unprinted yet functionalized surfaces. To block amine- or epoxy-functionalized substrates, bovine serum albumin (BSA) is one of the most commonly used blocking reagents because it is cheap and easy to use. Based on standard protocols from microarray manufactories, a BSA concentration of 1% (10 mg/mL or 200 μM) and reaction time of at least 30 min are required to efficiently block epoxy-coated slides. In this paper, we used both fluorescent and label-free methods to characterize the BSA blocking efficiency on epoxy-functionalized substrates. The blocking efficiency of BSA was characterized using a fluorescent scanner and a label-free oblique-incidence reflectivity difference (OI-RD) microscope. We found that (1) a BSA concentration of 0.05% (0.5 mg/mL or 10 μM) could give a blocking efficiency of 98%, and (2) the BSA blocking step took only about 5 min to be complete. Also, from real-time and in situ measurements, we were able to calculate the conformational properties (thickness, mass density, and number density) of BSA molecules deposited on the epoxy surface. © 2015 Society for Laboratory Automation and Screening.

  18. Image alignment

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Dowell, Larry Jonathan

    Disclosed is a method and device for aligning at least two digital images. An embodiment may use frequency-domain transforms of small tiles created from each image to identify substantially similar, "distinguishing" features within each of the images, and then align the images together based on the location of the distinguishing features. To accomplish this, an embodiment may create equal sized tile sub-images for each image. A "key" for each tile may be created by performing a frequency-domain transform calculation on each tile. A information-distance difference between each possible pair of tiles on each image may be calculated to identify distinguishingmore » features. From analysis of the information-distance differences of the pairs of tiles, a subset of tiles with high discrimination metrics in relation to other tiles may be located for each image. The subset of distinguishing tiles for each image may then be compared to locate tiles with substantially similar keys and/or information-distance metrics to other tiles of other images. Once similar tiles are located for each image, the images may be aligned in relation to the identified similar tiles.« less

  19. Hierarchical Self Assembly of Patterns from the Robinson Tilings: DNA Tile Design in an Enhanced Tile Assembly Model

    PubMed Central

    Padilla, Jennifer E.; Liu, Wenyan; Seeman, Nadrian C.

    2012-01-01

    We introduce a hierarchical self assembly algorithm that produces the quasiperiodic patterns found in the Robinson tilings and suggest a practical implementation of this algorithm using DNA origami tiles. We modify the abstract Tile Assembly Model, (aTAM), to include active signaling and glue activation in response to signals to coordinate the hierarchical assembly of Robinson patterns of arbitrary size from a small set of tiles according to the tile substitution algorithm that generates them. Enabling coordinated hierarchical assembly in the aTAM makes possible the efficient encoding of the recursive process of tile substitution. PMID:23226722

  20. Hierarchical Self Assembly of Patterns from the Robinson Tilings: DNA Tile Design in an Enhanced Tile Assembly Model.

    PubMed

    Padilla, Jennifer E; Liu, Wenyan; Seeman, Nadrian C

    2012-06-01

    We introduce a hierarchical self assembly algorithm that produces the quasiperiodic patterns found in the Robinson tilings and suggest a practical implementation of this algorithm using DNA origami tiles. We modify the abstract Tile Assembly Model, (aTAM), to include active signaling and glue activation in response to signals to coordinate the hierarchical assembly of Robinson patterns of arbitrary size from a small set of tiles according to the tile substitution algorithm that generates them. Enabling coordinated hierarchical assembly in the aTAM makes possible the efficient encoding of the recursive process of tile substitution.

  1. Glycome Diagnosis of Human Induced Pluripotent Stem Cells Using Lectin Microarray*

    PubMed Central

    Tateno, Hiroaki; Toyota, Masashi; Saito, Shigeru; Onuma, Yasuko; Ito, Yuzuru; Hiemori, Keiko; Fukumura, Mihoko; Matsushima, Asako; Nakanishi, Mio; Ohnuma, Kiyoshi; Akutsu, Hidenori; Umezawa, Akihiro; Horimoto, Katsuhisa; Hirabayashi, Jun; Asashima, Makoto

    2011-01-01

    Induced pluripotent stem cells (iPSCs) can now be produced from various somatic cell (SC) lines by ectopic expression of the four transcription factors. Although the procedure has been demonstrated to induce global change in gene and microRNA expressions and even epigenetic modification, it remains largely unknown how this transcription factor-induced reprogramming affects the total glycan repertoire expressed on the cells. Here we performed a comprehensive glycan analysis using 114 types of human iPSCs generated from five different SCs and compared their glycomes with those of human embryonic stem cells (ESCs; nine cell types) using a high density lectin microarray. In unsupervised cluster analysis of the results obtained by lectin microarray, both undifferentiated iPSCs and ESCs were clustered as one large group. However, they were clearly separated from the group of differentiated SCs, whereas all of the four SCs had apparently distinct glycome profiles from one another, demonstrating that SCs with originally distinct glycan profiles have acquired those similar to ESCs upon induction of pluripotency. Thirty-eight lectins discriminating between SCs and iPSCs/ESCs were statistically selected, and characteristic features of the pluripotent state were then obtained at the level of the cellular glycome. The expression profiles of relevant glycosyltransferase genes agreed well with the results obtained by lectin microarray. Among the 38 lectins, rBC2LCN was found to detect only undifferentiated iPSCs/ESCs and not differentiated SCs. Hence, the high density lectin microarray has proved to be valid for not only comprehensive analysis of glycans but also diagnosis of stem cells under the concept of the cellular glycome. PMID:21471226

  2. Tuning iteration space slicing based tiled multi-core code implementing Nussinov's RNA folding.

    PubMed

    Palkowski, Marek; Bielecki, Wlodzimierz

    2018-01-15

    RNA folding is an ongoing compute-intensive task of bioinformatics. Parallelization and improving code locality for this kind of algorithms is one of the most relevant areas in computational biology. Fortunately, RNA secondary structure approaches, such as Nussinov's recurrence, involve mathematical operations over affine control loops whose iteration space can be represented by the polyhedral model. This allows us to apply powerful polyhedral compilation techniques based on the transitive closure of dependence graphs to generate parallel tiled code implementing Nussinov's RNA folding. Such techniques are within the iteration space slicing framework - the transitive dependences are applied to the statement instances of interest to produce valid tiles. The main problem at generating parallel tiled code is defining a proper tile size and tile dimension which impact parallelism degree and code locality. To choose the best tile size and tile dimension, we first construct parallel parametric tiled code (parameters are variables defining tile size). With this purpose, we first generate two nonparametric tiled codes with different fixed tile sizes but with the same code structure and then derive a general affine model, which describes all integer factors available in expressions of those codes. Using this model and known integer factors present in the mentioned expressions (they define the left-hand side of the model), we find unknown integers in this model for each integer factor available in the same fixed tiled code position and replace in this code expressions, including integer factors, with those including parameters. Then we use this parallel parametric tiled code to implement the well-known tile size selection (TSS) technique, which allows us to discover in a given search space the best tile size and tile dimension maximizing target code performance. For a given search space, the presented approach allows us to choose the best tile size and tile dimension in parallel tiled code implementing Nussinov's RNA folding. Experimental results, received on modern Intel multi-core processors, demonstrate that this code outperforms known closely related implementations when the length of RNA strands is bigger than 2500.

  3. Use of alternative carrier materials in AOAC Official Method 2008.05, efficacy of liquid sporicides against spores of Bacillus subtilis on a hard, nonporous surface, quantitative three-step method.

    PubMed

    Tomasino, Stephen F; Rastogi, Vipin K; Wallace, Lalena; Smith, Lisa S; Hamilton, Martin A; Pines, Rebecca M

    2010-01-01

    The quantitative Three-Step Method (TSM) for testing the efficacy of liquid sporicides against spores of Bacillus subtilis on a hard, nonporous surface (glass) was adopted as AOAC Official Method 2008.05 in May 2008. The TSM uses 5 x 5 x 1 mm coupons (carriers) upon which spores have been inoculated and which are introduced into liquid sporicidal agent contained in a microcentrifuge tube. Following exposure of inoculated carriers and neutralization, spores are removed from carriers in three fractions (gentle washing, fraction A; sonication, fraction B; and gentle agitation, fraction C). Liquid from each fraction is serially diluted and plated on a recovery medium for spore enumeration. The counts are summed over the three fractions to provide the density (viable spores per carrier), which is log10-transformed to arrive at the log density. The log reduction is calculated by subtracting the mean log density for treated carriers from the mean log density for control carriers. This paper presents a single-laboratory investigation conducted to evaluate the applicability of using two porous carrier materials (ceramic tile and untreated pine wood) and one alternative nonporous material (stainless steel). Glass carriers were included in the study as the reference material. Inoculated carriers were evaluated against three commercially available liquid sporicides (sodium hypochlorite, a combination of peracetic acid and hydrogen peroxide, and glutaraldehyde), each at two levels of presumed efficacy (medium and high) to provide data for assessing the responsiveness of the TSM. Three coupons of each material were evaluated across three replications at each level; three replications of a control were required. Even though all carriers were inoculated with approximately the same number of spores, the observed counts of recovered spores were consistently higher for the nonporous carriers. For control carriers, the mean log densities for the four materials ranged from 6.63 for wood to 7.14 for steel. The pairwise differences between mean log densities, except for glass minus steel, were statistically significant (P < 0.001). The repeatability standard deviations (Sr) for the mean control log density per test were similar for the four materials, ranging from 0.08 for wood to 0.13 for tile. Spore recovery from the carrier materials ranged from approximately 20 to 70%: 20% (pine wood), 40% (ceramic tile), 55% (glass), and 70% (steel). Although the percent spore recovery from pine wood was significantly lower than that from other materials, the performance data indicate that the TSM provides a repeatable and responsive test for determining the efficacy of liquid sporicides on both porous and nonporous materials.

  4. Printing Proteins as Microarrays for High-Throughput Function Determination

    NASA Astrophysics Data System (ADS)

    MacBeath, Gavin; Schreiber, Stuart L.

    2000-09-01

    Systematic efforts are currently under way to construct defined sets of cloned genes for high-throughput expression and purification of recombinant proteins. To facilitate subsequent studies of protein function, we have developed miniaturized assays that accommodate extremely low sample volumes and enable the rapid, simultaneous processing of thousands of proteins. A high-precision robot designed to manufacture complementary DNA microarrays was used to spot proteins onto chemically derivatized glass slides at extremely high spatial densities. The proteins attached covalently to the slide surface yet retained their ability to interact specifically with other proteins, or with small molecules, in solution. Three applications for protein microarrays were demonstrated: screening for protein-protein interactions, identifying the substrates of protein kinases, and identifying the protein targets of small molecules.

  5. Spin waves in planar quasicrystal of Penrose tiling

    NASA Astrophysics Data System (ADS)

    Rychły, J.; Mieszczak, S.; Kłos, J. W.

    2018-03-01

    We investigated two-dimensional magnonic structures which are the counterparts of photonic quasicrystals forming Penrose tiling. We considered the slab composed of Ni (or Py) disks embedded in Fe (or Co) matrix. The disks are arranged in quasiperiodic Penrose-like structure. The infinite quasicrystal was approximated by its rectangular section with periodic boundary conditions applied. This approach allowed us to use the plane wave method to find the frequency spectrum of eigenmodes for spin waves and their spatial profiles. The calculated integrated density of states shows more distinctive magnonic gaps for the structure composed of materials of high magnetic contrast (Ni and Fe) and relatively high filling fraction. This proves the impact of quasiperiodic long-range order on the spectrum of spin waves. We also investigated the localization of spin wave eingenmodes resulting from the quasiperiodicity of the structure.

  6. The momentum transfer of incompressible turbulent separated flow due to cavities with steps

    NASA Technical Reports Server (NTRS)

    White, R. E.; Norton, D. J.

    1977-01-01

    An experimental study was conducted using a plate test bed having a turbulent boundary layer to determine the momentum transfer to the faces of step/cavity combinations on the plate. Experimental data were obtained from configurations including an isolated configuration and an array of blocks in tile patterns. A momentum transfer correlation model of pressure forces on an isolated step/cavity was developed with experimental results to relate flow and geometry parameters. Results of the experiments reveal that isolated step/cavity excrecences do not have a unique and unifying parameter group due in part to cavity depth effects and in part to width parameter scale effects. Drag predictions for tile patterns by a kinetic pressure empirical method predict experimental results well. Trends were not, however, predicted by a method of variable roughness density phenomenology.

  7. Strategies for comparing gene expression profiles from different microarray platforms: application to a case-control experiment.

    PubMed

    Severgnini, Marco; Bicciato, Silvio; Mangano, Eleonora; Scarlatti, Francesca; Mezzelani, Alessandra; Mattioli, Michela; Ghidoni, Riccardo; Peano, Clelia; Bonnal, Raoul; Viti, Federica; Milanesi, Luciano; De Bellis, Gianluca; Battaglia, Cristina

    2006-06-01

    Meta-analysis of microarray data is increasingly important, considering both the availability of multiple platforms using disparate technologies and the accumulation in public repositories of data sets from different laboratories. We addressed the issue of comparing gene expression profiles from two microarray platforms by devising a standardized investigative strategy. We tested this procedure by studying MDA-MB-231 cells, which undergo apoptosis on treatment with resveratrol. Gene expression profiles were obtained using high-density, short-oligonucleotide, single-color microarray platforms: GeneChip (Affymetrix) and CodeLink (Amersham). Interplatform analyses were carried out on 8414 common transcripts represented on both platforms, as identified by LocusLink ID, representing 70.8% and 88.6% of annotated GeneChip and CodeLink features, respectively. We identified 105 differentially expressed genes (DEGs) on CodeLink and 42 DEGs on GeneChip. Among them, only 9 DEGs were commonly identified by both platforms. Multiple analyses (BLAST alignment of probes with target sequences, gene ontology, literature mining, and quantitative real-time PCR) permitted us to investigate the factors contributing to the generation of platform-dependent results in single-color microarray experiments. An effective approach to cross-platform comparison involves microarrays of similar technologies, samples prepared by identical methods, and a standardized battery of bioinformatic and statistical analyses.

  8. Tile Patterns with LOGO--Part III: Tile Patterns from Mult Tiles Using Logo.

    ERIC Educational Resources Information Center

    Clason, Robert G.

    1991-01-01

    A mult tile is a set of polygons each of which can be dissected into smaller polygons similar to the original set of polygons. Using a recursive LOGO method that requires solutions to various geometry and trigonometry problems, dissections of mult tiles are carried out repeatedly to produce tile patterns. (MDH)

  9. Military Curriculum Materials for Vocational and Technical Education. Builders School, Ceramic Tile Setting 3-9.

    ERIC Educational Resources Information Center

    Ohio State Univ., Columbus. National Center for Research in Vocational Education.

    This course, for individualized or group instruction on ceramic tile setting, was developed from military sources for use in vocational education. The course provides students with skills in mortar preparation, surface preparation, tile layout planning, tile setting, tile cutting, and the grouting of tile joints. Both theory and shop assignments…

  10. Steep-Slope Assembly Testing of Clay and Concrete Tile With and Without Cool Pigmented Colors

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Miller, William A

    Cool color pigments and sub-tile venting of clay and concrete tile roofs significantly impact the heat flow crossing the roof deck of a steep-slope roof. Field measures for the tile roofs revealed a 70% drop in the peak heat flow crossing the deck as compared to a direct-nailed asphalt shingle roof. The Tile Roofing Institute (TRI) and its affiliate members are keenly interested in documenting the magnitude of the drop for obtaining solar reflectance credits with state and federal "cool roof" building efficiency standards. Tile roofs are direct-nailed or are attached to a deck with batten or batten and counter-battenmore » construction. S-Misson clay and concrete tile roofs, a medium-profile concrete tile roof, and a flat slate tile roof were installed on fully nstrumented attic test assemblies. Temperature measures of the roof, deck, attic, and ceiling, heat flows, solar reflectance, thermal emittance, and the ambient weather were recorded for each of the tile roofs and also on an adjacent attic cavity covered with a conventional pigmented and directnailed asphalt shingle roof. ORNL measured the tile's underside temperature and the bulk air temperature and heat flows just underneath the tile for batten and counter-batten tile systems and compared the results to the conventional asphalt shingle.« less

  11. A two-stage ceramic tile grout sealing process using a high power diode laser—Grout development and materials characteristics

    NASA Astrophysics Data System (ADS)

    Lawrence, J.; Li, L.; Spencer, J. T.

    1998-04-01

    Work has been conducted using a 60 Wcw high power diode laser (HPDL) in order to determine the feasibility and characteristics of sealing the void between adjoining ceramic tiles with a specially developed grout material having an impermeable enamel surface glaze. A two-stage process has been developed using a new grout material which consists of two distinct components: an amalgamated compound substrate and a glazed enamel surface; the amalgamated compound seal providing a tough, heat resistant bulk substrate, whilst the enamel provides an impervious surface. HPDL processing has resulted in crack free seals produced in normal atmospheric conditions. The basic process phenomena are investigated and the laser effects in terms of seal morphology, composition and microstructure are presented. Also, the resultant heat affects are analysed and described, as well as the effects of the shield gases, O 2 and Ar, during laser processing. Tiles were successfully sealed with power densities as low as 500 W/cm 2 and at rates up to 600 mm/min. Contact angle measurements revealed that due to the wettability characteristics of the amalgamated oxide compound grout (AOCG), laser surface treatment was necessary in order to alter the surface from a polycrystalline to a semi-amorphous structure, thus allowing the enamel to adhere. Bonding of the enamel to the AOCG and the ceramic tiles was identified as being principally due to van der Waals forces, and on a very small scale, some of the base AOCG material dissolving into the glaze.

  12. A new simple tiling, with unusual properties, by a polyhedron with 14 faces.

    PubMed

    Gabbrielli, Ruggero; O'Keeffe, Michael

    2008-05-01

    A monotypic simple tiling by a 14-face polyhedron that does not admit an isohedral tiling is described. The tiling is triclinic and contains four distinct, but combinatorially equivalent, kinds of tile.

  13. Fractal analysis of mandibular trabecular bone: optimal tile sizes for the tile counting method.

    PubMed

    Huh, Kyung-Hoe; Baik, Jee-Seon; Yi, Won-Jin; Heo, Min-Suk; Lee, Sam-Sun; Choi, Soon-Chul; Lee, Sun-Bok; Lee, Seung-Pyo

    2011-06-01

    This study was performed to determine the optimal tile size for the fractal dimension of the mandibular trabecular bone using a tile counting method. Digital intraoral radiographic images were obtained at the mandibular angle, molar, premolar, and incisor regions of 29 human dry mandibles. After preprocessing, the parameters representing morphometric characteristics of the trabecular bone were calculated. The fractal dimensions of the processed images were analyzed in various tile sizes by the tile counting method. The optimal range of tile size was 0.132 mm to 0.396 mm for the fractal dimension using the tile counting method. The sizes were closely related to the morphometric parameters. The fractal dimension of mandibular trabecular bone, as calculated with the tile counting method, can be best characterized with a range of tile sizes from 0.132 to 0.396 mm.

  14. Fractal analysis of mandibular trabecular bone: optimal tile sizes for the tile counting method

    PubMed Central

    Huh, Kyung-Hoe; Baik, Jee-Seon; Heo, Min-Suk; Lee, Sam-Sun; Choi, Soon-Chul; Lee, Sun-Bok; Lee, Seung-Pyo

    2011-01-01

    Purpose This study was performed to determine the optimal tile size for the fractal dimension of the mandibular trabecular bone using a tile counting method. Materials and Methods Digital intraoral radiographic images were obtained at the mandibular angle, molar, premolar, and incisor regions of 29 human dry mandibles. After preprocessing, the parameters representing morphometric characteristics of the trabecular bone were calculated. The fractal dimensions of the processed images were analyzed in various tile sizes by the tile counting method. Results The optimal range of tile size was 0.132 mm to 0.396 mm for the fractal dimension using the tile counting method. The sizes were closely related to the morphometric parameters. Conclusion The fractal dimension of mandibular trabecular bone, as calculated with the tile counting method, can be best characterized with a range of tile sizes from 0.132 to 0.396 mm. PMID:21977478

  15. The role of group index engineering in series-connected photonic crystal microcavities for high density sensor microarrays

    PubMed Central

    Zou, Yi; Chakravarty, Swapnajit; Zhu, Liang; Chen, Ray T.

    2014-01-01

    We experimentally demonstrate an efficient and robust method for series connection of photonic crystal microcavities that are coupled to photonic crystal waveguides in the slow light transmission regime. We demonstrate that group index taper engineering provides excellent optical impedance matching between the input and output strip waveguides and the photonic crystal waveguide, a nearly flat transmission over the entire guided mode spectrum and clear multi-resonance peaks corresponding to individual microcavities that are connected in series. Series connected photonic crystal microcavities are further multiplexed in parallel using cascaded multimode interference power splitters to generate a high density silicon nanophotonic microarray comprising 64 photonic crystal microcavity sensors, all of which are interrogated simultaneously at the same instant of time. PMID:25316921

  16. 41. West tile gauge on south pier. Each square tile ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    41. West tile gauge on south pier. Each square tile is 4' in size. Bottom number scale of west tile - Duluth Ship Canal, South Pier, North end of Minnesota Point & Canal Park, Duluth, St. Louis County, MN

  17. 48. East tile gauge on south pier. Each square tile ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    48. East tile gauge on south pier. Each square tile is 4' in size. Lower section of tile cross only - Duluth Ship Canal, South Pier, North end of Minnesota Point & Canal Park, Duluth, St. Louis County, MN

  18. KSC-06pd0022

    NASA Image and Video Library

    2006-01-11

    KENNEDY SPACE CENTER, FLA. - In the Thermal Protection System Facility, Tim Wright, engineering manager with United Space Alliance, tests a new tile, called "Boeing replacement insulation" or "BRI-18." The new tiles will gradually replace older tiles around main landing gear doors, external tank doors and nose landing gear doors. Currently, 10 tiles have been processed inside the facility. Discovery will receive the first BRI-18 tiles. Technicians inside the Orbiter Processing Facility are performing fit checks and will begin bonding the tiles to the vehicle this month. The raw material is manufactured by The Boeing Company in Huntington Beach, Calif. Replacing older tile with the BRI-18 tile in strategic areas is one of the Columbia Accident Investigation Board's recommendations to strengthen the orbiters. The tiles are more impact resistant than previous designs, enhancing the crew’s safety.

  19. KSC-06pd0021

    NASA Image and Video Library

    2006-01-11

    KENNEDY SPACE CENTER, FLA. - In the Thermal Protection System Facility, Tim Wright, engineering manager with United Space Alliance, tests a new tile, called "Boeing replacement insulation" or "BRI-18." The new tiles will gradually replace older tiles around main landing gear doors, external tank doors and nose landing gear doors. Currently, 10 tiles have been processed inside the facility. Discovery will receive the first BRI-18 tiles. Technicians inside the Orbiter Processing Facility are performing fit checks and will begin bonding the tiles to the vehicle this month. The raw material is manufactured by The Boeing Company in Huntington Beach, Calif. Replacing older tile with the BRI-18 tile in strategic areas is one of the Columbia Accident Investigation Board's recommendations to strengthen the orbiters. The tiles are more impact resistant than previous designs, enhancing the crew’s safety.

  20. 40. West tile gauge on south pier. Each square tile ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    40. West tile gauge on south pier. Each square tile is 4' in size. Bottom right hand corner of west tile - Duluth Ship Canal, South Pier, North end of Minnesota Point & Canal Park, Duluth, St. Louis County, MN

  1. 39. West tile gauge on south pier. Each square tile ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    39. West tile gauge on south pier. Each square tile is 4' in size. Bottom left hand corner of west tile - Duluth Ship Canal, South Pier, North end of Minnesota Point & Canal Park, Duluth, St. Louis County, MN

  2. A highly oriented hybrid microarray modified electrode fabricated by a template-free method for ultrasensitive electrochemical DNA recognition

    NASA Astrophysics Data System (ADS)

    Shi, Lei; Chu, Zhenyu; Dong, Xueliang; Jin, Wanqin; Dempsey, Eithne

    2013-10-01

    Highly oriented growth of a hybrid microarray was realized by a facile template-free method on gold substrates for the first time. The proposed formation mechanism involves an interfacial structure-directing force arising from self-assembled monolayers (SAMs) between gold substrates and hybrid crystals. Different SAMs and variable surface coverage of the assembled molecules play a critical role in the interfacial directing forces and influence the morphologies of hybrid films. A highly oriented hybrid microarray was formed on the highly aligned and vertical SAMs of 1,4-benzenedithiol molecules with rigid backbones, which afforded an intense structure-directing power for the oriented growth of hybrid crystals. Additionally, the density of the microarray could be adjusted by controlling the surface coverage of assembled molecules. Based on the hybrid microarray modified electrode with a large specific area (ca. 10 times its geometrical area), a label-free electrochemical DNA biosensor was constructed for the detection of an oligonucleotide fragment of the avian flu virus H5N1. The DNA biosensor displayed a significantly low detection limit of 5 pM (S/N = 3), a wide linear response from 10 pM to 10 nM, as well as excellent selectivity, good regeneration and high stability. We expect that the proposed template-free method can provide a new reference for the fabrication of a highly oriented hybrid array and the as-prepared microarray modified electrode will be a promising paradigm in constructing highly sensitive and selective biosensors.Highly oriented growth of a hybrid microarray was realized by a facile template-free method on gold substrates for the first time. The proposed formation mechanism involves an interfacial structure-directing force arising from self-assembled monolayers (SAMs) between gold substrates and hybrid crystals. Different SAMs and variable surface coverage of the assembled molecules play a critical role in the interfacial directing forces and influence the morphologies of hybrid films. A highly oriented hybrid microarray was formed on the highly aligned and vertical SAMs of 1,4-benzenedithiol molecules with rigid backbones, which afforded an intense structure-directing power for the oriented growth of hybrid crystals. Additionally, the density of the microarray could be adjusted by controlling the surface coverage of assembled molecules. Based on the hybrid microarray modified electrode with a large specific area (ca. 10 times its geometrical area), a label-free electrochemical DNA biosensor was constructed for the detection of an oligonucleotide fragment of the avian flu virus H5N1. The DNA biosensor displayed a significantly low detection limit of 5 pM (S/N = 3), a wide linear response from 10 pM to 10 nM, as well as excellent selectivity, good regeneration and high stability. We expect that the proposed template-free method can provide a new reference for the fabrication of a highly oriented hybrid array and the as-prepared microarray modified electrode will be a promising paradigm in constructing highly sensitive and selective biosensors. Electronic supplementary information (ESI) available: Four-probe method for determining the conductivity of the hybrid crystal (Fig. S1); stability comparisons of the hybrid films (Fig. S2); FESEM images of the hybrid microarray (Fig. S3); electrochemical characterizations of the hybrid films (Fig. S4); DFT simulations (Fig. S5); cross-sectional FESEM image of the hybrid microarray (Fig. S6); regeneration and stability tests of the DNA biosensor (Fig. S7). See DOI: 10.1039/c3nr03097k

  3. Sequencing ebola and marburg viruses genomes using microarrays.

    PubMed

    Hardick, Justin; Woelfel, Roman; Gardner, Warren; Ibrahim, Sofi

    2016-08-01

    Periodic outbreaks of Ebola and Marburg hemorrhagic fevers have occurred in Africa over the past four decades with case fatality rates reaching as high as 90%. The latest Ebola outbreak in West Africa in 2014 raised concerns that these infections can spread across continents and pose serious health risks. Early and accurate identification of the causative agents is necessary to contain outbreaks. In this report, we describe sequencing-by-hybridization (SBH) technique using high density microarrays to identify Ebola and Marburg viruses. The microarrays were designed to interrogate the sequences of entire viral genomes, and were evaluated with three species of Ebolavirus (Reston, Sudan, and Zaire), and three strains of Marburgvirus (Angola, Musoke, and Ravn). The results showed that the consensus sequences generated with four or more hybridizations had 92.1-98.9% accuracy over 95-99% of the genomes. Additionally, with SBH microarrays it was possible to distinguish between different strains of the Lake Victoria Marburgvirus. J. Med. Virol. 88:1303-1308, 2016. © 2016 Wiley Periodicals, Inc. © 2016 Wiley Periodicals, Inc.

  4. Single-Nucleosome Mapping of Histone Modifications in S. cerevisiae

    PubMed Central

    Kim, Minkyu; Buratowski, Stephen; Schreiber, Stuart L; Friedman, Nir

    2005-01-01

    Covalent modification of histone proteins plays a role in virtually every process on eukaryotic DNA, from transcription to DNA repair. Many different residues can be covalently modified, and it has been suggested that these modifications occur in a great number of independent, meaningful combinations. Published low-resolution microarray studies on the combinatorial complexity of histone modification patterns suffer from confounding effects caused by the averaging of modification levels over multiple nucleosomes. To overcome this problem, we used a high-resolution tiled microarray with single-nucleosome resolution to investigate the occurrence of combinations of 12 histone modifications on thousands of nucleosomes in actively growing S. cerevisiae. We found that histone modifications do not occur independently; there are roughly two groups of co-occurring modifications. One group of lysine acetylations shows a sharply defined domain of two hypo-acetylated nucleosomes, adjacent to the transcriptional start site, whose occurrence does not correlate with transcription levels. The other group consists of modifications occurring in gradients through the coding regions of genes in a pattern associated with transcription. We found no evidence for a deterministic code of many discrete states, but instead we saw blended, continuous patterns that distinguish nucleosomes at one location (e.g., promoter nucleosomes) from those at another location (e.g., over the 3′ ends of coding regions). These results are consistent with the idea of a simple, redundant histone code, in which multiple modifications share the same role. PMID:16122352

  5. Chromatin Immunoprecipitation and Microarray Analysis Suggest Functional Cooperation between Kaposi's Sarcoma-Associated Herpesvirus ORF57 and K-bZIP

    PubMed Central

    Hunter, Olga V.; Sei, Emi; Richardson, R. Blake

    2013-01-01

    The Kaposi's sarcoma-associated herpesvirus (KSHV) open reading frame 57 (ORF57)-encoded protein (Mta) is a multifunctional regulator of viral gene expression. ORF57 is essential for viral replication, so elucidation of its molecular mechanisms is important for understanding KSHV infection. ORF57 has been implicated in nearly every aspect of viral gene expression, including transcription, RNA stability, splicing, export, and translation. Here we demonstrate that ORF57 interacts with the KSHV K-bZIP protein in vitro and in cell extracts from lytically reactivated infected cells. To further test the biological relevance of the interaction, we performed a chromatin immunoprecipitation and microarray (ChIP-chip) analysis using anti-ORF57 antibodies and a KSHV tiling array. The results revealed four specific areas of enrichment, including the ORF4 and K8 (K-bZIP) promoters, as well as oriLyt, all of which interact with K-bZIP. In addition, ORF57 associated with DNA corresponding to the PAN RNA transcribed region, a known posttranscriptional target of ORF57. All of the peaks were RNase insensitive, demonstrating that ORF57 association with the viral genome is unlikely to be mediated exclusively by an RNA tether. Our data demonstrate that ORF57 associates with the viral genome by using at least two modes of recruitment, and they suggest that ORF57 and K-bZIP coregulate viral gene expression during lytic infection. PMID:23365430

  6. Direct atomic force microscopy observation of DNA tile crystal growth at the single-molecule level.

    PubMed

    Evans, Constantine G; Hariadi, Rizal F; Winfree, Erik

    2012-06-27

    While the theoretical implications of models of DNA tile self-assembly have been extensively researched and such models have been used to design DNA tile systems for use in experiments, there has been little research testing the fundamental assumptions of those models. In this paper, we use direct observation of individual tile attachments and detachments of two DNA tile systems on a mica surface imaged with an atomic force microscope (AFM) to compile statistics of tile attachments and detachments. We show that these statistics fit the widely used kinetic Tile Assembly Model and demonstrate AFM movies as a viable technique for directly investigating DNA tile systems during growth rather than after assembly.

  7. Tony Rollins fashions a new tile for the Space Shuttle orbiter

    NASA Technical Reports Server (NTRS)

    1998-01-01

    In the Tile Fabrication Shop, Tony Rollins, with United Space Alliance, holds down a curtain while making a test sample of tile on a block 5-axis computerized numerical control milling machine. About 70 percent of a Space Shuttle orbiter's external surface is shielded from heat by a network of more than 24,000 tiles formed from a silica fiber compound. They are known as High-Temperature Reusable Surface Insulation (HRSI) tiles and Low-Temperature Reusable Surface Insulation (LRSI) tiles. Most HRSI tiles are 6 inches square, but may be as large as 12 inches in some areas, and 1 to 5 inches thick. LRSI tiles are generally 8 inches square, ranging from 0.2- to 1-inch thick. More advanced materials such as Flexible Insulation Blankets have replaced tiles on some upper surfaces of the orbiter.

  8. Ceramic tile expansion engine housing

    DOEpatents

    Myers, Blake

    1995-01-01

    An expandable ceramic tile housing for a high temperature engine is disclosed wherein each tile is independently supported in place in an interlocking matrix by retention mechanisms which mechanically couple the individual ceramic tiles to an outer metal support housing while maintaining thermal isolation of the metal housing from the ceramic tiles. The ceramic tiles are formed with either an octagonal front face portion and a square shank portion or a square front face portion with an octagonal shank portion. The length of the sides of the octagonal front face portion on one tile is equal to the length of the sides of the square front face portion of adjoining tiles to permit formation of an interlocking matrix. Fibrous ceramic sealing material may be placed between radial and tangential facing surfaces of adjacent tiles to limit radial gas flow therebetween. Labyrinth-sealed pressure-controlled compartments may be established between the tile housing and the outer metal support housing to control radial gas flow.

  9. Ceramic tile expansion engine housing

    DOEpatents

    Myers, B.

    1995-04-11

    An expandable ceramic tile housing for a high temperature engine is disclosed wherein each tile is independently supported in place in an interlocking matrix by retention mechanisms which mechanically couple the individual ceramic tiles to an outer metal support housing while maintaining thermal isolation of the metal housing from the ceramic tiles. The ceramic tiles are formed with either an octagonal front face portion and a square shank portion or a square front face portion with an octagonal shank portion. The length of the sides of the octagonal front face portion on one tile is equal to the length of the sides of the square front face portion of adjoining tiles to permit formation of an interlocking matrix. Fibrous ceramic sealing material may be placed between radial and tangential facing surfaces of adjacent tiles to limit radial gas flow there between. Labyrinth-sealed pressure-controlled compartments may be established between the tile housing and the outer metal support housing to control radial gas flow. 8 figures.

  10. Rapid Detection of Rare Deleterious Variants by Next Generation Sequencing with Optional Microarray SNP Genotype Data

    PubMed Central

    Watson, Christopher M.; Crinnion, Laura A.; Gurgel‐Gianetti, Juliana; Harrison, Sally M.; Daly, Catherine; Antanavicuite, Agne; Lascelles, Carolina; Markham, Alexander F.; Pena, Sergio D. J.; Bonthron, David T.

    2015-01-01

    ABSTRACT Autozygosity mapping is a powerful technique for the identification of rare, autosomal recessive, disease‐causing genes. The ease with which this category of disease gene can be identified has greatly increased through the availability of genome‐wide SNP genotyping microarrays and subsequently of exome sequencing. Although these methods have simplified the generation of experimental data, its analysis, particularly when disparate data types must be integrated, remains time consuming. Moreover, the huge volume of sequence variant data generated from next generation sequencing experiments opens up the possibility of using these data instead of microarray genotype data to identify disease loci. To allow these two types of data to be used in an integrated fashion, we have developed AgileVCFMapper, a program that performs both the mapping of disease loci by SNP genotyping and the analysis of potentially deleterious variants using exome sequence variant data, in a single step. This method does not require microarray SNP genotype data, although analysis with a combination of microarray and exome genotype data enables more precise delineation of disease loci, due to superior marker density and distribution. PMID:26037133

  11. A low-density cDNA microarray with a unique reference RNA: pattern recognition analysis for IFN efficacy prediction to HCV as a model.

    PubMed

    Daiba, Akito; Inaba, Niro; Ando, Satoshi; Kajiyama, Naoki; Yatsuhashi, Hiroshi; Terasaki, Hiroshi; Ito, Atsushi; Ogasawara, Masanori; Abe, Aki; Yoshioka, Junichi; Hayashida, Kazuhiro; Kaneko, Shuichi; Kohara, Michinori; Ito, Satoru

    2004-03-19

    We have designed and established a low-density (295 genes) cDNA microarray for the prediction of IFN efficacy in hepatitis C patients. To obtain a precise and consistent microarray data, we collected a data set from three spots for each gene (mRNA) and using three different scanning conditions. We also established an artificial reference RNA representing pseudo-inflammatory conditions from established hepatocyte cell lines supplemented with synthetic RNAs to 48 inflammatory genes. We also developed a novel algorithm that replaces the standard hierarchical-clustering method and allows handling of the large data set with ease. This algorithm utilizes a standard space database (SSDB) as a key scale to calculate the Mahalanobis distance (MD) from the center of gravity in the SSDB. We further utilized sMD (divided by parameter k: MD/k) to reduce MD number as a predictive value. The efficacy prediction of conventional IFN mono-therapy was 100% for non-responder (NR) vs. transient responder (TR)/sustained responder (SR) (P < 0.0005). Finally, we show that this method is acceptable for clinical application.

  12. Design, fabrication, and tests of a metallic shell tile thermal protection system for space transportation

    NASA Technical Reports Server (NTRS)

    Macconochie, Ian O.; Kelly, H. Neale

    1989-01-01

    A thermal protection tile for earth-to-orbit transports is described. The tiles consist of a rigid external shell filled with a flexible insulation. The tiles tend to be thicker than the current Shuttle rigidized silica tiles for the same entry heat load but are projected to be more durable and lighter. The tiles were thermally tested for several simulated entry trajectories.

  13. Development and qualification of a bulk tungsten divertor row for JET

    NASA Astrophysics Data System (ADS)

    Mertens, Ph.; Altmann, H.; Hirai, T.; Philipps, V.; Pintsuk, G.; Rapp, J.; Riccardo, V.; Schweer, B.; Uytdenhouwen, I.; Samm, U.

    2009-06-01

    A bulk tungsten divertor row has been developed in the frame of the ITER-like Wall project at JET. It consists of 96 tiles grouped in 48 modules around the torus. The outer strike point is located on those tiles for most of the ITER-relevant, high triangularity plasmas. High power loads (locally up to 10-20 MW/m 2) and erosion rates are expected, even a risk of melting, especially with the transients or ELM loads. These are demanding conditions for an inertially cooled design as prescribed. A lamella design has been selected for the tungsten, arranged to control the eddy and halo current flows. The lamellae must also withstand high temperature gradients (2200 to 220 °C over 40 mm height), without overheating the supporting carrier (600-700 °C maximum). As a consequence of the tungsten emissivity, the radiative cooling drops appreciably in comparison with the current CFC tiles, calling for interleaved plasma scenarios in terms of performance. The compromise between shadowing and power handling is discussed, as well as the consequences for operation. Prototypes have been exposed in TEXTOR and in an electron beam facility (JUDITH-2) to the nominal power density of 7 MW/m 2 for 10 s and, in addition, to higher loads leading to surface temperatures above 2000 °C.

  14. Concept for a beryllium divertor with in-situ plasma spray surface regeneration

    NASA Astrophysics Data System (ADS)

    Smith, M. F.; Watson, R. D.; McGrath, R. T.; Croessmann, C. D.; Whitley, J. B.; Causey, R. A.

    1990-04-01

    Two serious problems with the use of graphite tiles on the ITER divertor are the limited lifetime due to erosion and the difficulty of replacing broken tiles inside the machine. Beryllium is proposed as an alternative low-Z armor material because the plasma spray process can be used to make in-situ repairs of eroded or damaged surfaces. Recent advances in plasma spray technology have produced beryllium coatings of 98% density with a 95% deposition efficiency and strong adhesion to the substrate. With existing technology, the entire active region of the ITER divertor surface could be coated with 2 mm of beryllium in less than 15 h using four small plasma spray guns. Beryllium also has other potential advantages over graphite, e.g., efficient gettering of oxygen, ten times less tritium inventory, reduced problems of transient fueling from D/T exchange and release, no runaway erosion cascades from self-sputtering, better adhesion of redeposited material, as well as higher strength, ductility, and fracture toughness than graphite. A 2-D finite element stress analysis was performed on a 3 mm thick Be tile brazed to an OFHC soft-copper saddle block, which was brazed to a high-strength copper tube. Peak stresses remained 50% below the ultimate strength for both brazing and in-service thermal stresses.

  15. Tile Patterns with LOGO--Part II: Tile Patterns from Rep Tiles Using LOGO.

    ERIC Educational Resources Information Center

    Clason, Robert G.

    1991-01-01

    Described is a recursive LOGO method for dissecting polygons into congruent parts (rep tiles) similar to the original polygon, thereby producing unexpected patterns. A list of descriptions for such dissections is included along with suggestions for modifications that allow extended student explorations into tile patterns. (JJK)

  16. The First Static and Dynamic Analysis of 3-D Printed Sintered Ceramics for Body Armor Applications

    DTIC Science & Technology

    2016-09-01

    evaluate sintered alumina tiles produced by 3-D printing methodology. This report examines the static and quasi -static parameters (including density...Figures iv List of Tables iv Acknowledgments v 1. Introduction 1 2. Processing and Experimental Procedures 1 3. Results and Discussion 7 4...6 Fig. 8 Experimental setup for recording fracture .............................................7 Fig. 9 Rod projectile

  17. Switched Antenna Array Tile for Real-Time Microwave Imaging Aperture

    DTIC Science & Technology

    2016-06-26

    Switched Antenna Array Tile for Real -Time Microwave Imaging Aperture William F. Moulder, Janusz J. Majewski, Charles M. Coldwell, James D. Krieger...Fast Imaging Algorithm 10mm 250mm Switched Array Tile Fig. 1. Diagram of real -time imaging array, with fabricated antenna tile. except for antenna...formed. IV. CONCLUSIONS A switched array tile to be used in a real time imaging aperture has been presented. Design and realization of the tile were

  18. Beautiful Math, Part 5: Colorful Archimedean Tilings from Dynamical Systems.

    PubMed

    Ouyang, Peichang; Zhao, Weiguo; Huang, Xuan

    2015-01-01

    The art of tiling originated very early in the history of civilization. Almost every known human society has made use of tilings in some form or another. In particular, tilings using only regular polygons have great visual appeal. Decorated regular tilings with continuous and symmetrical patterns were widely used in decoration field, such as mosaics, pavements, and brick walls. In science, these tilings provide inspiration for synthetic organic chemistry. Building on previous CG&#x0026;A &#x201C;Beautiful Math&#x201D; articles, the authors propose an invariant mapping method to create colorful patterns on Archimedean tilings (1-uniform tilings). The resulting patterns simultaneously have global crystallographic symmetry and local cyclic or dihedral symmetry.

  19. Filter arrays

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Page, Ralph H.; Doty, Patrick F.

    2017-08-01

    The various technologies presented herein relate to a tiled filter array that can be used in connection with performance of spatial sampling of optical signals. The filter array comprises filter tiles, wherein a first plurality of filter tiles are formed from a first material, the first material being configured such that only photons having wavelengths in a first wavelength band pass therethrough. A second plurality of filter tiles is formed from a second material, the second material being configured such that only photons having wavelengths in a second wavelength band pass therethrough. The first plurality of filter tiles and themore » second plurality of filter tiles can be interspersed to form the filter array comprising an alternating arrangement of first filter tiles and second filter tiles.« less

  20. Design and Applications of Rapid Image Tile Producing Software Based on Mosaic Dataset

    NASA Astrophysics Data System (ADS)

    Zha, Z.; Huang, W.; Wang, C.; Tang, D.; Zhu, L.

    2018-04-01

    Map tile technology is widely used in web geographic information services. How to efficiently produce map tiles is key technology for rapid service of images on web. In this paper, a rapid producing software for image tile data based on mosaic dataset is designed, meanwhile, the flow of tile producing is given. Key technologies such as cluster processing, map representation, tile checking, tile conversion and compression in memory are discussed. Accomplished by software development and tested by actual image data, the results show that this software has a high degree of automation, would be able to effectively reducing the number of IO and improve the tile producing efficiency. Moreover, the manual operations would be reduced significantly.

  1. An automated data management/analysis system for space shuttle orbiter tiles. [stress analysis

    NASA Technical Reports Server (NTRS)

    Giles, G. L.; Ballas, M.

    1982-01-01

    An engineering data management system was combined with a nonlinear stress analysis program to provide a capability for analyzing a large number of tiles on the space shuttle orbiter. Tile geometry data and all data necessary of define the tile loads environment accessed automatically as needed for the analysis of a particular tile or a set of tiles. User documentation provided includes: (1) description of computer programs and data files contained in the system; (2) definitions of all engineering data stored in the data base; (3) characteristics of the tile anaytical model; (4) instructions for preparation of user input; and (5) a sample problem to illustrate use of the system. Description of data, computer programs, and analytical models of the tile are sufficiently detailed to guide extension of the system to include additional zones of tiles and/or additional types of analyses

  2. Method and apparatus for displaying information

    NASA Technical Reports Server (NTRS)

    Huang, Sui (Inventor); Eichler, Gabriel (Inventor); Ingber, Donald E. (Inventor)

    2010-01-01

    A method for displaying large amounts of information. The method includes the steps of forming a spatial layout of tiles each corresponding to a representative reference element; mapping observed elements onto the spatial layout of tiles of representative reference elements; assigning a respective value to each respective tile of the spatial layout of the representative elements; and displaying an image of the spatial layout of tiles of representative elements. Each tile includes atomic attributes of representative elements. The invention also relates to an apparatus for displaying large amounts of information. The apparatus includes a tiler forming a spatial layout of tiles, each corresponding to a representative reference element; a comparator mapping observed elements onto said spatial layout of tiles of representative reference elements; an assigner assigning a respective value to each respective tile of said spatial layout of representative reference elements; and a display displaying an image of the spatial layout of tiles of representative reference elements.

  3. An experimental summary of plasma arc exposures of space shuttle high-temperature reusable surface insulation tile array with a single missing tile (conducted at the Ames Research Center)

    NASA Technical Reports Server (NTRS)

    Galanter, S. A.

    1975-01-01

    A space shuttle high temperature reusable surface insulation (HRSI) tile array with a single missing or lost tile was exposed to a hot gas simulated reentry environment to investigate the heating conditions in and around the vicinity of the missing HRSI tile. Heat flux and pressure data for the lost tile condition were obtained by the use of a water cooled lost tile calibration model. The maximum aluminum substrate temperature obtained during the simulated reentry was 128 C (263 F). The lost tile calibration data indicated a maximum heat flux in the lost tile cavity region of 63 percent of the upstream reference value. This test was conducted at the Ames Research Center in the 20 MW semielliptical thermal protection system (TPS) pilot plasma arc test facility.

  4. Healing assessment of tile sets for error tolerance in DNA self-assembly.

    PubMed

    Hashempour, M; Mashreghian Arani, Z; Lombardi, F

    2008-12-01

    An assessment of the effectiveness of healing for error tolerance in DNA self-assembly tile sets for algorithmic/nano-manufacturing applications is presented. Initially, the conditions for correct binding of a tile to an existing aggregate are analysed using a Markovian approach; based on this analysis, it is proved that correct aggregation (as identified with a so-called ideal tile set) is not always met for the existing tile sets for nano-manufacturing. A metric for assessing tile sets for healing by utilising punctures is proposed. Tile sets are investigated and assessed with respect to features such as error (mismatched tile) movement, punctured area and bond types. Subsequently, it is shown that the proposed metric can comprehensively assess the healing effectiveness of a puncture type for a tile set and its capability to attain error tolerance for the desired pattern. Extensive simulation results are provided.

  5. A Global User-Driven Model for Tile Prefetching in Web Geographical Information Systems.

    PubMed

    Pan, Shaoming; Chong, Yanwen; Zhang, Hang; Tan, Xicheng

    2017-01-01

    A web geographical information system is a typical service-intensive application. Tile prefetching and cache replacement can improve cache hit ratios by proactively fetching tiles from storage and replacing the appropriate tiles from the high-speed cache buffer without waiting for a client's requests, which reduces disk latency and improves system access performance. Most popular prefetching strategies consider only the relative tile popularities to predict which tile should be prefetched or consider only a single individual user's access behavior to determine which neighbor tiles need to be prefetched. Some studies show that comprehensively considering all users' access behaviors and all tiles' relationships in the prediction process can achieve more significant improvements. Thus, this work proposes a new global user-driven model for tile prefetching and cache replacement. First, based on all users' access behaviors, a type of expression method for tile correlation is designed and implemented. Then, a conditional prefetching probability can be computed based on the proposed correlation expression mode. Thus, some tiles to be prefetched can be found by computing and comparing the conditional prefetching probability from the uncached tiles set and, similarly, some replacement tiles can be found in the cache buffer according to multi-step prefetching. Finally, some experiments are provided comparing the proposed model with other global user-driven models, other single user-driven models, and other client-side prefetching strategies. The results show that the proposed model can achieve a prefetching hit rate in approximately 10.6% ~ 110.5% higher than the compared methods.

  6. Comparison of performance of tile drainage routines in SWAT 2009 and 2012 in an extensively tile-drained watershed in the Midwest

    NASA Astrophysics Data System (ADS)

    Guo, Tian; Gitau, Margaret; Merwade, Venkatesh; Arnold, Jeffrey; Srinivasan, Raghavan; Hirschi, Michael; Engel, Bernard

    2018-01-01

    Subsurface tile drainage systems are widely used in agricultural watersheds in the Midwestern US and enable the Midwest area to become highly productive agricultural lands, but can also create environmental problems, for example nitrate-N contamination associated with drainage waters. The Soil and Water Assessment Tool (SWAT) has been used to model watersheds with tile drainage. SWAT2012 revisions 615 and 645 provide new tile drainage routines. However, few studies have used these revisions to study tile drainage impacts at both field and watershed scales. Moreover, SWAT2012 revision 645 improved the soil moisture based curve number calculation method, which has not been fully tested. This study used long-term (1991-2003) field site and river station data from the Little Vermilion River (LVR) watershed to evaluate performance of tile drainage routines in SWAT2009 revision 528 (the old routine) and SWAT2012 revisions 615 and 645 (the new routine). Both the old and new routines provided reasonable but unsatisfactory (NSE < 0.5) uncalibrated flow and nitrate loss results for a mildly sloped watershed with low runoff. The calibrated monthly tile flow, surface flow, nitrate-N in tile and surface flow, sediment and annual corn and soybean yield results from SWAT with the old and new tile drainage routines were compared with observed values. Generally, the new routine provided acceptable simulated tile flow (NSE = 0.48-0.65) and nitrate in tile flow (NSE = 0.48-0.68) for field sites with random pattern tile and constant tile spacing, while the old routine simulated tile flow and nitrate in tile flow results for the field site with constant tile spacing were unacceptable (NSE = 0.00-0.32 and -0.29-0.06, respectively). The new modified curve number calculation method in revision 645 (NSE = 0.50-0.81) better simulated surface runoff than revision 615 (NSE = -0.11-0.49). The calibration provided reasonable parameter sets for the old and new routines in the LVR watershed, and the validation results showed that the new routine has the potential to accurately simulate hydrologic processes in mildly sloped watersheds.

  7. Advanced Strain-Isolation-Pad Material with Bonded Fibrous Construction

    NASA Technical Reports Server (NTRS)

    Seibold, R. W.; Saito, C. A.; Buller, B. W.

    1982-01-01

    The feasibility of utilizing air lay and liquid lay felt deposition techniques to fabricate strain isolation pad (SIP) materials for the Space Shuttle Orbiter was demonstrated. These materials were developed as candidate replacements for the present needled felt SIP used between the ceramic tiles and the aluminum skin on the undersurface of the Orbiter. The SIP materials that were developed consisted of high temperature aramid fibers deposited by controlled fluid (air or liquid) carriers to form low density unbonded felts. The deposited felts were then bonded at the fiber intersections with a small amount of high temperature polyimide resin. This type of bonded felt construction can potentially eliminate two of the problems associated with the present SIP, viz., transmittal of localized stresses into the tiles and load history dependent mechanical response. However, further work is needed to achieve adequate through thickness tensile strength in the bonded felts.

  8. Properties of Concrete Paving Blocks and Hollow Tiles with Recycled Aggregate from Construction and Demolition Wastes.

    PubMed

    Rodríguez, Carlos; Miñano, Isabel; Aguilar, Miguel Ángel; Ortega, José Marcos; Parra, Carlos; Sánchez, Isidro

    2017-11-30

    In recent years there has been an increasing tendency to recycle the wastes generated by building companies in the construction industry, demolition wastes being the most important in terms of volume. The aim of this work is to study the possibility of using recycled aggregates from construction and demolition wastes in the preparation of precast non-structural concretes. To that purpose, two different percentages (15% and 30%) of natural aggregates were substituted by recycled aggregates in the manufacture of paving blocks and hollow tiles. Dosages used by the company have not been changed by the introduction of recycled aggregate. Precast elements have been tested by means of compressive and flexural strength, water absorption, density, abrasion, and slipping resistance. The results obtained show the possibility of using these wastes at an industrial scale, satisfying the requirements of the Spanish standards for these elements.

  9. Properties of Concrete Paving Blocks and Hollow Tiles with Recycled Aggregate from Construction and Demolition Wastes

    PubMed Central

    Rodríguez, Carlos; Miñano, Isabel; Aguilar, Miguel Ángel; Parra, Carlos

    2017-01-01

    In recent years there has been an increasing tendency to recycle the wastes generated by building companies in the construction industry, demolition wastes being the most important in terms of volume. The aim of this work is to study the possibility of using recycled aggregates from construction and demolition wastes in the preparation of precast non-structural concretes. To that purpose, two different percentages (15% and 30%) of natural aggregates were substituted by recycled aggregates in the manufacture of paving blocks and hollow tiles. Dosages used by the company have not been changed by the introduction of recycled aggregate. Precast elements have been tested by means of compressive and flexural strength, water absorption, density, abrasion, and slipping resistance. The results obtained show the possibility of using these wastes at an industrial scale, satisfying the requirements of the Spanish standards for these elements. PMID:29189745

  10. An outbreak of sea cucumbers hinders coral recruitment

    NASA Astrophysics Data System (ADS)

    Zhang, Yu-Yang; McCook, Laurence; Jiang, Lei; Lian, Jian-Sheng; Liu, Sheng; Huang, Hui

    2018-06-01

    An outbreak of a small sessile sea cucumber, Ocnus sanya, occurred on the degraded Luhuitou coral reef in Sanya Bay, Hainan, China. This study explored the pattern of distribution of O. sanya on the reef and the impacts of the high abundance of O. sanya on post-settlement mortality of Pocillopora damicornis recruits. The density of O. sanya ranged from about 500 to over 2000 individuals m-2 with 10.95-23.69% cover on hard substrate. Terracotta tiles with O. sanya on the surface accumulated 19.7% more surface sediment than those without sea cucumbers. Post-settlement P. damicornis recruits had significantly higher mortality on terracotta tiles with O. sanya than those without O. sanya after 21 d. Overall, O. sanya appears to increase sediment stress and inhibit coral recruitment, exacerbating the degradation of Luhuitou Reef. This study raises the possibility that such novel outbreak species could contribute significant additional stress on coral reefs at larger scales.

  11. A proposed metric for assessing the measurement quality of individual microarrays

    PubMed Central

    Kim, Kyoungmi; Page, Grier P; Beasley, T Mark; Barnes, Stephen; Scheirer, Katherine E; Allison, David B

    2006-01-01

    Background High-density microarray technology is increasingly applied to study gene expression levels on a large scale. Microarray experiments rely on several critical steps that may introduce error and uncertainty in analyses. These steps include mRNA sample extraction, amplification and labeling, hybridization, and scanning. In some cases this may be manifested as systematic spatial variation on the surface of microarray in which expression measurements within an individual array may vary as a function of geographic position on the array surface. Results We hypothesized that an index of the degree of spatiality of gene expression measurements associated with their physical geographic locations on an array could indicate the summary of the physical reliability of the microarray. We introduced a novel way to formulate this index using a statistical analysis tool. Our approach regressed gene expression intensity measurements on a polynomial response surface of the microarray's Cartesian coordinates. We demonstrated this method using a fixed model and presented results from real and simulated datasets. Conclusion We demonstrated the potential of such a quantitative metric for assessing the reliability of individual arrays. Moreover, we showed that this procedure can be incorporated into laboratory practice as a means to set quality control specifications and as a tool to determine whether an array has sufficient quality to be retained in terms of spatial correlation of gene expression measurements. PMID:16430768

  12. Understanding the Elementary Steps in DNA Tile-Based Self-Assembly.

    PubMed

    Jiang, Shuoxing; Hong, Fan; Hu, Huiyu; Yan, Hao; Liu, Yan

    2017-09-26

    Although many models have been developed to guide the design and implementation of DNA tile-based self-assembly systems with increasing complexity, the fundamental assumptions of the models have not been thoroughly tested. To expand the quantitative understanding of DNA tile-based self-assembly and to test the fundamental assumptions of self-assembly models, we investigated DNA tile attachment to preformed "multi-tile" arrays in real time and obtained the thermodynamic and kinetic parameters of single tile attachment in various sticky end association scenarios. With more sticky ends, tile attachment becomes more thermostable with an approximately linear decrease in the free energy change (more negative). The total binding free energy of sticky ends is partially compromised by a sequence-independent energy penalty when tile attachment forms a constrained configuration: "loop". The minimal loop is a 2 × 2 tetramer (Loop4). The energy penalty of loops of 4, 6, and 8 tiles was analyzed with the independent loop model assuming no interloop tension, which is generalizable to arbitrary tile configurations. More sticky ends also contribute to a faster on-rate under isothermal conditions when nucleation is the rate-limiting step. Incorrect sticky end contributes to neither the thermostability nor the kinetics. The thermodynamic and kinetic parameters of DNA tile attachment elucidated here will contribute to the future improvement and optimization of tile assembly modeling, precise control of experimental conditions, and structural design for error-free self-assembly.

  13. Multiple epitope presentation and surface density control enabled by chemoselective immobilization lead to enhanced performance in IgE-binding fingerprinting on peptide microarrays.

    PubMed

    Gori, Alessandro; Cretich, Marina; Vanna, Renzo; Sola, Laura; Gagni, Paola; Bruni, Giulia; Liprino, Marta; Gramatica, Furio; Burastero, Samuele; Chiari, Marcella

    2017-08-29

    Multiple ligand presentation is a powerful strategy to enhance the affinity of a probe for its corresponding target. A promising application of this concept lies in the analytical field, where surface immobilized probes interact with their corresponding targets in the context of complex biological samples. Here we investigate the effect of multiple epitope presentation (MEP) in the challenging context of IgE-detection in serum samples using peptide microarrays, and evaluate the influence of probes surface density on the assay results. Using the milk allergen alpha-lactalbumin as a model, we have synthesized three immunoreactive epitope sequences in a linear, branched and tandem form and exploited a chemoselective click strategy (CuAAC) for their immobilization on the surface of two biosensors, a microarray and an SPR chip both modified with the same clickable polymeric coating. We first demonstrated that a fine tuning of the surface peptide density plays a crucial role to fully exploit the potential of oriented and multiple peptide display. We then compared the three multiple epitope presentations in a microarray assay using sera samples from milk allergic patients, confirming that a multiple presentation, in particular that of the tandem construct, allows for a more efficient characterization of IgE-binding fingerprints at a statistically significant level. To gain insights on the binding parameters that characterize antibody/epitopes affinity, we selected the most reactive epitope of the series (LAC1) and performed a Surface Plasmon Resonance Imaging (SPRi) analysis comparing different epitope architectures (linear versus branched versus tandem). We demonstrated that the tandem peptide provides an approximately twofold increased binding capacity with respect to the linear and branched peptides, that could be attributed to a lower rate of dissociation (K d ). Copyright © 2017 Elsevier B.V. All rights reserved.

  14. KSC-98pc929

    NASA Image and Video Library

    1998-08-10

    In the Tile Fabrication Shop, Tony Rollins, with United Space Alliance, holds down a curtain while making a test sample of tile on a block 5-axis computerized numerical control milling machine. About 70 percent of a Space Shuttle orbiter’s external surface is shielded from heat by a network of more than 24,000 tiles formed from a silica fiber compound. They are known as High-Temperature Reusable Surface Insulation (HRSI) tiles and Low-Temperature Reusable Surface Insulation (LRSI) tiles. Most HRSI tiles are 6 inches square, but may be as large as 12 inches in some areas, and 1 to 5 inches thick. LRSI tiles are generally 8 inches square, ranging from 0.2to 1-inch thick. More advanced materials such as Flexible Insulation Blankets have replaced tiles on some upper surfaces of the orbiter

  15. Multiprocessor Z-Buffer Architecture for High-Speed, High Complexity Computer Image Generation.

    DTIC Science & Technology

    1983-12-01

    Oversampling 50 17. "Poking Through" Effects 51 18. Sampling Paths 52 19. Triangle Variables 54 20. Intelligent Tiling Algorithm 61 21. Tiler Functional Blocks...64 * 22. HSD Interface 65 23. Tiling Machine Setup 67 24. Tiling Machine 68 25. Tile Accumulate 69 26. A lx$ Sorting Machine 77 27. A 2x8 Sorting...Delay 227 87. Effect of Triangle Size on Tiler Throughput Rates 229 88. Tiling Machine Setup Stage Performance for Oversample Mode 234 89. Tiling

  16. Aerodynamic heat transfer to RSI tile surfaces and gap intersections. [Reusable Surface Insulation

    NASA Technical Reports Server (NTRS)

    Dunavant, J. C.; Throckmorton, D. A.

    1974-01-01

    Review of the results of aerothermal heating tests of a simulated reusable surface insulation (RSI) tile array, performed on the sidewall of a Mach-10 hypersonic tunnel. In particular, the heating characteristics of the tile array, such as they result from heating inside the tile-expansion-space providing gaps between individual tiles, are investigated. The results include the finding that heating on the upstream face of a tile is strongly affected by the interacting longitudinal gap flow.

  17. Evaluation of tile layer productivity in construction project

    NASA Astrophysics Data System (ADS)

    Aziz, Hamidi Abdul; Hassan, Siti Hafizan; Rosly, Noorsyalili; Ul-Saufie, Ahmad Zia

    2017-10-01

    Construction is a key sector of the national economy for countries all over the world. Until today, construction industries are still facing lots of problems concerning the low productivity, poor safety and insufficient quality. Labour productivity is one of the factors that will give impact to the quality of projects. This study is focusing on evaluating the tile layer productivity in the area of Seberang Perai, Penang. The objective of this study is to determine the relationship of age and experience of tile layers with their productivity and to evaluate the effect of nationality to tile layers productivity. Interview and site observation of tile layers has been conducted to obtain the data of age, experience and nationality of tile layers. Site observation is made to obtain the number of tiles installed for every tile layer for the duration of 1 hour, and the data were analysed by using Statistical Package for Social Science (IBM SPSS Statistic 23) software. As a result, there is a moderate linear relationship between age and experience of tile layers with their productivity. The age of 30 and the experience of 4 years give the highest productivity. It also can be concluded that the tile layers from Indonesia tend to have higher productivity compared to tile layers from Myanmar.

  18. Geometrical tile design for complex neighborhoods.

    PubMed

    Czeizler, Eugen; Kari, Lila

    2009-01-01

    Recent research has showed that tile systems are one of the most suitable theoretical frameworks for the spatial study and modeling of self-assembly processes, such as the formation of DNA and protein oligomeric structures. A Wang tile is a unit square, with glues on its edges, attaching to other tiles and forming larger and larger structures. Although quite intuitive, the idea of glues placed on the edges of a tile is not always natural for simulating the interactions occurring in some real systems. For example, when considering protein self-assembly, the shape of a protein is the main determinant of its functions and its interactions with other proteins. Our goal is to use geometric tiles, i.e., square tiles with geometrical protrusions on their edges, for simulating tiled paths (zippers) with complex neighborhoods, by ribbons of geometric tiles with simple, local neighborhoods. This paper is a step toward solving the general case of an arbitrary neighborhood, by proposing geometric tile designs that solve the case of a "tall" von Neumann neighborhood, the case of the f-shaped neighborhood, and the case of a 3 x 5 "filled" rectangular neighborhood. The techniques can be combined and generalized to solve the problem in the case of any neighborhood, centered at the tile of reference, and included in a 3 x (2k + 1) rectangle.

  19. The challenging scales of the bird: Shuttle tile structural integrity

    NASA Technical Reports Server (NTRS)

    Schneider, W. C.; Miller, G. J.

    1985-01-01

    The principal design issues, tests, and analyses required to solve the tile integrity problem on the space shuttle orbiters are addressed. Proof testing of installed tiles is discussed along with an airflow test of special tiles. Orbiter windshield tiles are considered in terms of changes necessary to ensure acceptable margins of safety for flight.

  20. Systematic analysis of transcribed loci in ENCODE regions using RACE sequencing reveals extensive transcription in the human genome.

    PubMed

    Wu, Jia Qian; Du, Jiang; Rozowsky, Joel; Zhang, Zhengdong; Urban, Alexander E; Euskirchen, Ghia; Weissman, Sherman; Gerstein, Mark; Snyder, Michael

    2008-01-03

    Recent studies of the mammalian transcriptome have revealed a large number of additional transcribed regions and extraordinary complexity in transcript diversity. However, there is still much uncertainty regarding precisely what portion of the genome is transcribed, the exact structures of these novel transcripts, and the levels of the transcripts produced. We have interrogated the transcribed loci in 420 selected ENCyclopedia Of DNA Elements (ENCODE) regions using rapid amplification of cDNA ends (RACE) sequencing. We analyzed annotated known gene regions, but primarily we focused on novel transcriptionally active regions (TARs), which were previously identified by high-density oligonucleotide tiling arrays and on random regions that were not believed to be transcribed. We found RACE sequencing to be very sensitive and were able to detect low levels of transcripts in specific cell types that were not detectable by microarrays. We also observed many instances of sense-antisense transcripts; further analysis suggests that many of the antisense transcripts (but not all) may be artifacts generated from the reverse transcription reaction. Our results show that the majority of the novel TARs analyzed (60%) are connected to other novel TARs or known exons. Of previously unannotated random regions, 17% were shown to produce overlapping transcripts. Furthermore, it is estimated that 9% of the novel transcripts encode proteins. We conclude that RACE sequencing is an efficient, sensitive, and highly accurate method for characterization of the transcriptome of specific cell/tissue types. Using this method, it appears that much of the genome is represented in polyA+ RNA. Moreover, a fraction of the novel RNAs can encode protein and are likely to be functional.

  1. Flaw detection in a multi-material multi-layered composite: using fem and air-coupled ut

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Livings, R. A.; Dayal, V.; Barnard, D. J.

    Ceramic tiles are the main ingredient of a multi-layer multi-material composite being considered for the modernization of tank armors. The high stiffness, low attenuation, and precise dimensions of these uniform tiles make them remarkable resonators when driven to vibrate. This study is aimed at modeling the vibration modes of the tiles and the composite lay-up with finite element analysis and comparing the results with the resonance modes observed in air-coupled ultrasonic excitation of the tiles and armor samples. Defects in the tile, during manufacturing and/or after usage, are expected to change the resonance modes. The comparison of a pristine tile/lay-upmore » and a defective tile/lay-up will thus be a quantitative damage metric. The understanding of the vibration behavior of the tile, both by itself and in the composite lay-up, can provide useful guidance to the nondestructive evaluation of armor panels containing ceramic tiles.« less

  2. Experimental annotation of the human genome using microarray technology.

    PubMed

    Shoemaker, D D; Schadt, E E; Armour, C D; He, Y D; Garrett-Engele, P; McDonagh, P D; Loerch, P M; Leonardson, A; Lum, P Y; Cavet, G; Wu, L F; Altschuler, S J; Edwards, S; King, J; Tsang, J S; Schimmack, G; Schelter, J M; Koch, J; Ziman, M; Marton, M J; Li, B; Cundiff, P; Ward, T; Castle, J; Krolewski, M; Meyer, M R; Mao, M; Burchard, J; Kidd, M J; Dai, H; Phillips, J W; Linsley, P S; Stoughton, R; Scherer, S; Boguski, M S

    2001-02-15

    The most important product of the sequencing of a genome is a complete, accurate catalogue of genes and their products, primarily messenger RNA transcripts and their cognate proteins. Such a catalogue cannot be constructed by computational annotation alone; it requires experimental validation on a genome scale. Using 'exon' and 'tiling' arrays fabricated by ink-jet oligonucleotide synthesis, we devised an experimental approach to validate and refine computational gene predictions and define full-length transcripts on the basis of co-regulated expression of their exons. These methods can provide more accurate gene numbers and allow the detection of mRNA splice variants and identification of the tissue- and disease-specific conditions under which genes are expressed. We apply our technique to chromosome 22q under 69 experimental condition pairs, and to the entire human genome under two experimental conditions. We discuss implications for more comprehensive, consistent and reliable genome annotation, more efficient, full-length complementary DNA cloning strategies and application to complex diseases.

  3. Interlocking wettable ceramic tiles

    DOEpatents

    Tabereaux, Jr., Alton T.; Fredrickson, Guy L.; Groat, Eric; Mroz, Thomas; Ulicny, Alan; Walker, Mark F.

    2005-03-08

    An electrolytic cell for the reduction of aluminum having a layer of interlocking cathode tiles positioned on a cathode block. Each tile includes a main body and a vertical restraining member to prevent movement of the tiles away from the cathode block during operation of the cell. The anode of the electrolytic cell may be positioned about 1 inch from the interlocking cathode tiles.

  4. Hypothetical Reentry Thermostructural Performance of Space Shuttle Orbiter With Missing or Eroded Thermal Protection Tiles

    NASA Technical Reports Server (NTRS)

    Ko, William L.; Gong, Leslie; Quinn, Robert D.

    2004-01-01

    This report deals with hypothetical reentry thermostructural performance of the Space Shuttle orbiter with missing or eroded thermal protection system (TPS) tiles. The original STS-5 heating (normal transition at 1100 sec) and the modified STS-5 heating (premature transition at 800 sec) were used as reentry heat inputs. The TPS missing or eroded site is assumed to be located at the center or corner (spar-rib juncture) of the lower surface of wing midspan bay 3. For cases of missing TPS tiles, under the original STS-5 heating, the orbiter can afford to lose only one TPS tile at the center or two TPS tiles at the corner (spar-rib juncture) of the lower surface of wing midspan bay 3. Under modified STS-5 heating, the orbiter cannot afford to lose even one TPS tile at the center or at the corner of the lower surface of wing midspan bay 3. For cases of eroded TPS tiles, the aluminum skin temperature rises relatively slowly with the decreasing thickness of the eroded central or corner TPS tile until most of the TPS tile is eroded away, and then increases exponentially toward the missing tile case.

  5. Evaluation of the hooghoudt and kirkham tile drain equations in the soil and water assessment tool to simulate tile flow and nitrate-nitrogen.

    PubMed

    Moriasi, Daniel N; Gowda, Prasanna H; Arnold, Jeffrey G; Mulla, David J; Ale, Srinivasulu; Steiner, Jean L; Tomer, Mark D

    2013-11-01

    Subsurface tile drains in agricultural systems of the midwestern United States are a major contributor of nitrate-N (NO-N) loadings to hypoxic conditions in the Gulf of Mexico. Hydrologic and water quality models, such as the Soil and Water Assessment Tool, are widely used to simulate tile drainage systems. The Hooghoudt and Kirkham tile drain equations in the Soil and Water Assessment Tool have not been rigorously tested for predicting tile flow and the corresponding NO-N losses. In this study, long-term (1983-1996) monitoring plot data from southern Minnesota were used to evaluate the SWAT version 2009 revision 531 (hereafter referred to as SWAT) model for accurately estimating subsurface tile drain flows and associated NO-N losses. A retention parameter adjustment factor was incorporated to account for the effects of tile drainage and slope changes on the computation of surface runoff using the curve number method (hereafter referred to as Revised SWAT). The SWAT and Revised SWAT models were calibrated and validated for tile flow and associated NO-N losses. Results indicated that, on average, Revised SWAT predicted monthly tile flow and associated NO-N losses better than SWAT by 48 and 28%, respectively. For the calibration period, the Revised SWAT model simulated tile flow and NO-N losses within 4 and 1% of the observed data, respectively. For the validation period, it simulated tile flow and NO-N losses within 8 and 2%, respectively, of the observed values. Therefore, the Revised SWAT model is expected to provide more accurate simulation of the effectiveness of tile drainage and NO-N management practices. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

  6. 9. Detail of "BMT lines" tile sign, and decorative tiles ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    9. Detail of "BMT lines" tile sign, and decorative tiles between center and east castellations of south facade. Looking north. - Stillwell Avenue Station, Intersection of Stillwell & Surf Avenues, Brooklyn, Kings County, NY

  7. High-density, microsphere-based fiber optic DNA microarrays.

    PubMed

    Epstein, Jason R; Leung, Amy P K; Lee, Kyong Hoon; Walt, David R

    2003-05-01

    A high-density fiber optic DNA microarray has been developed consisting of oligonucleotide-functionalized, 3.1-microm-diameter microspheres randomly distributed on the etched face of an imaging fiber bundle. The fiber bundles are comprised of 6000-50000 fused optical fibers and each fiber terminates with an etched well. The microwell array is capable of housing complementary-sized microspheres, each containing thousands of copies of a unique oligonucleotide probe sequence. The array fabrication process results in random microsphere placement. Determining the position of microspheres in the random array requires an optical encoding scheme. This array platform provides many advantages over other array formats. The microsphere-stock suspension concentration added to the etched fiber can be controlled to provide inherent sensor redundancy. Examining identical microspheres has a beneficial effect on the signal-to-noise ratio. As other sequences of interest are discovered, new microsphere sensing elements can be added to existing microsphere pools and new arrays can be fabricated incorporating the new sequences without altering the existing detection capabilities. These microarrays contain the smallest feature sizes (3 microm) of any DNA array, allowing interrogation of extremely small sample volumes. Reducing the feature size results in higher local target molecule concentrations, creating rapid and highly sensitive assays. The microsphere array platform is also flexible in its applications; research has included DNA-protein interaction profiles, microbial strain differentiation, and non-labeled target interrogation with molecular beacons. Fiber optic microsphere-based DNA microarrays have a simple fabrication protocol enabling their expansion into other applications, such as single cell-based assays.

  8. Modeling and Simulation of Ceramic Arrays to Improve Ballaistic Performance

    DTIC Science & Technology

    2013-11-01

    2219 , 2000 Tile gap is found to increase the DoP as compared to One Tile tiles The next step will be run simulations on narrower and wider gap sizes...experiments described in reference - ARL-TR- 2219 , 2000 □ Tile gap is found to increase the DoP as compared to One Tile tiles □ The next step will be run...L| Al m ^ s\\cr V^ 1 v^ □ Smoothed-particle hydrodynamics (SPH) used for all parts □ SPH size = 0.40-mm, totaling 278k

  9. Self-organized chiral colloidal crystals of Brownian square crosses.

    PubMed

    Zhao, Kun; Mason, Thomas G

    2014-04-16

    We study aqueous Brownian dispersions of microscale, hard, monodisperse platelets, shaped as achiral square crosses, in two dimensions (2D). When slowly concentrated while experiencing thermal excitations, the crosses self-organize into fluctuating 2D colloidal crystals. As the particle area fraction φA is raised, an achiral rhombic crystal phase forms at φA ≈ 0.52. Above φA ≈ 0.56, the rhombic crystal gives way to a square crystal phase that exhibits long-range chiral symmetry breaking (CSB) via a crystal-crystal phase transition; the observed chirality in a particular square crystallite has either a positive or a negative enantiomeric sense. By contrast to triangles and rhombs, which exhibit weak CSB as a result of total entropy maximization, square crosses display robust long-range CSB that is primarily dictated by how they tile space at high densities. We measure the thermal distribution of orientation angles γ of the crosses' arms relative to the diagonal bisector of the local square crystal lattice as a function of φA, and the average measured γ (φA) agrees with a re-scaled model involving efficient packing of rotated cross shapes. Our findings imply that a variety of hard achiral shapes can be designed to form equilibrium chiral phases by considering their tiling at high densities.

  10. Geometrical Tile Design for Complex Neighborhoods

    PubMed Central

    Czeizler, Eugen; Kari, Lila

    2009-01-01

    Recent research has showed that tile systems are one of the most suitable theoretical frameworks for the spatial study and modeling of self-assembly processes, such as the formation of DNA and protein oligomeric structures. A Wang tile is a unit square, with glues on its edges, attaching to other tiles and forming larger and larger structures. Although quite intuitive, the idea of glues placed on the edges of a tile is not always natural for simulating the interactions occurring in some real systems. For example, when considering protein self-assembly, the shape of a protein is the main determinant of its functions and its interactions with other proteins. Our goal is to use geometric tiles, i.e., square tiles with geometrical protrusions on their edges, for simulating tiled paths (zippers) with complex neighborhoods, by ribbons of geometric tiles with simple, local neighborhoods. This paper is a step toward solving the general case of an arbitrary neighborhood, by proposing geometric tile designs that solve the case of a “tall” von Neumann neighborhood, the case of the f-shaped neighborhood, and the case of a 3 × 5 “filled” rectangular neighborhood. The techniques can be combined and generalized to solve the problem in the case of any neighborhood, centered at the tile of reference, and included in a 3 × (2k + 1) rectangle. PMID:19956398

  11. Physical principles for DNA tile self-assembly.

    PubMed

    Evans, Constantine G; Winfree, Erik

    2017-06-19

    DNA tiles provide a promising technique for assembling structures with nanoscale resolution through self-assembly by basic interactions rather than top-down assembly of individual structures. Tile systems can be programmed to grow based on logical rules, allowing for a small number of tile types to assemble large, complex assemblies that can retain nanoscale resolution. Such algorithmic systems can even assemble different structures using the same tiles, based on inputs that seed the growth. While programming and theoretical analysis of tile self-assembly often makes use of abstract logical models of growth, experimentally implemented systems are governed by nanoscale physical processes that can lead to very different behavior, more accurately modeled by taking into account the thermodynamics and kinetics of tile attachment and detachment in solution. This review discusses the relationships between more abstract and more physically realistic tile assembly models. A central concern is how consideration of model differences enables the design of tile systems that robustly exhibit the desired abstract behavior in realistic physical models and in experimental implementations. Conversely, we identify situations where self-assembly in abstract models can not be well-approximated by physically realistic models, putting constraints on physical relevance of the abstract models. To facilitate the discussion, we introduce a unified model of tile self-assembly that clarifies the relationships between several well-studied models in the literature. Throughout, we highlight open questions regarding the physical principles for DNA tile self-assembly.

  12. Covering the Plane with Rep-Tiles.

    ERIC Educational Resources Information Center

    Fosnaugh, Linda S.; Harrell, Marvin E.

    1996-01-01

    Presents an activity in which students use geometric figures, rep-tiles, to design a tile floor. Rep-tiles are geometric figures of which copies can fit together to form a larger similar figure. Includes reproducible student worksheet. (MKR)

  13. Flaw investigation in a multi-layered, multi-material composite: Using air-coupled ultrasonic resonance imaging

    NASA Astrophysics Data System (ADS)

    Livings, R. A.; Dayal, V.; Barnard, D. J.; Hsu, D. K.

    2012-05-01

    Ceramic tiles are the main ingredient of a multi-material, multi-layered composite being considered for the modernization of tank armors. The high stiffness, low attenuation, and precise dimensions of these uniform tiles make them remarkable resonators when driven to vibrate. Defects in the tile, during manufacture or after usage, are expected to change the resonance frequencies and resonance images of the tile. The comparison of the resonance frequencies and resonance images of a pristine tile/lay-up to a defective tile/lay-up will thus be a quantitative damage metric. By examining the vibrational behavior of these tiles and the composite lay-up with Finite Element Modeling and analytical plate vibration equations, the development of a new Nondestructive Evaluation technique is possible. This study examines the development of the Air-Coupled Ultrasonic Resonance Imaging technique as applied to a hexagonal ceramic tile and a multi-material, multi-layered composite.

  14. Real-time biscuit tile image segmentation method based on edge detection.

    PubMed

    Matić, Tomislav; Aleksi, Ivan; Hocenski, Željko; Kraus, Dieter

    2018-05-01

    In this paper we propose a novel real-time Biscuit Tile Segmentation (BTS) method for images from ceramic tile production line. BTS method is based on signal change detection and contour tracing with a main goal of separating tile pixels from background in images captured on the production line. Usually, human operators are visually inspecting and classifying produced ceramic tiles. Computer vision and image processing techniques can automate visual inspection process if they fulfill real-time requirements. Important step in this process is a real-time tile pixels segmentation. BTS method is implemented for parallel execution on a GPU device to satisfy the real-time constraints of tile production line. BTS method outperforms 2D threshold-based methods, 1D edge detection methods and contour-based methods. Proposed BTS method is in use in the biscuit tile production line. Copyright © 2018 ISA. Published by Elsevier Ltd. All rights reserved.

  15. Architectural Survey of Pence Elementary School, Fort Leonard Wood, Missouri

    DTIC Science & Technology

    2011-09-01

    classroom floors , replacement acoustical tile drop ceilings, both original pendent ceiling light fixtures and replacement light fixtures, replacement wood...fixed pane transoms above, original door hardware, acoustical tile drop-ceiling, asbestos tile floor , and a metal radiator cover (photos 38-40...119). The corridors have acoustical tile drop-ceilings, concrete block walls, and asbestos tile floors (photo 44). There are several push-pin cork

  16. Composite treatment of ceramic tile armor

    DOEpatents

    Hansen, James G. R. [Oak Ridge, TN; Frame, Barbara J [Oak Ridge, TN

    2010-12-14

    An improved ceramic tile armor has a core of boron nitride and a polymer matrix composite (PMC) facing of carbon fibers fused directly to the impact face of the tile. A polyethylene fiber composite backing and spall cover are preferred. The carbon fiber layers are cured directly onto the tile, not adhered using a separate adhesive so that they are integral with the tile, not a separate layer.

  17. Composite treatment of ceramic tile armor

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Hansen, James G. R.; Frame, Barbara J

    An improved ceramic tile armor has a core of boron nitride and a polymer matrix composite (PMC) facing of carbon fibers fused directly to the impact face of the tile. A polyethylene fiber composite backing and spall cover are preferred. The carbon fiber layers are cured directly onto the tile, not adhered using a separate adhesive so that they are integral with the tile, not a separate layer.

  18. Positive feedback fishery: Population consequences of `crab-tiling' on the green crab Carcinus maenas

    NASA Astrophysics Data System (ADS)

    Sheehan, E. V.; Thompson, R. C.; Coleman, R. A.; Attrill, M. J.

    2008-11-01

    Collection of marine invertebrates for use as fishing bait is a substantial activity in many parts of the world, often with unknown ecological consequences. As new fisheries develop, it is critical for environmental managers to have high quality ecological information regarding the potential impacts, in order to develop sound management strategies. Crab-tiling is a largely unregulated and un-researched fishery, which operates commercially in the south-west UK. The target species is the green crab Carcinus maenas. Those crabs which are pre-ecdysis and have a carapace width greater than 40 mm are collected to be sold to recreational anglers as bait. Collection involves laying artificial structures on intertidal sandflats and mudflats in estuaries. Crabs use these structures as refugia and are collected during low tide. However, the effect that this fishery has on populations of C. maenas is not known. The impact of crab-tiling on C. maenas population structure was determined by sampling crabs from tiled estuaries and non-tiled estuaries using baited drop-nets. A spatially and temporarily replicated, balanced design was used to compare crab abundance, sizes and sex ratios between estuaries. Typically, fisheries are associated with a reduction in the abundance of the target species. Crab-tiling, however, significantly increased C. maenas abundance. This was thought to be a result of the extra habitat in tiled estuaries, which probably provides protection from natural predators, such as birds and fish. Although crabs were more abundant in tiled estuaries than non-tiled estuaries, the overall percentage of reproductively active crabs in non-tiled estuaries was greater than in tiled estuaries. As with most exploited fisheries stocks, crabs in exploited (tiled) estuaries tended to be smaller, with a modal carapace width of 20-29 mm rather than 30-39 mm in non-tiled estuaries. The sex ratio of crabs however; was not significantly different between tiled and non-tiled estuaries. These results illustrate the potential to manage fished populations using habitat provision to mitigate the effects of fishing pressure.

  19. Tile-Image Merging and Delivering for Virtual Camera Services on Tiled-Display for Real-Time Remote Collaboration

    NASA Astrophysics Data System (ADS)

    Choe, Giseok; Nang, Jongho

    The tiled-display system has been used as a Computer Supported Cooperative Work (CSCW) environment, in which multiple local (and/or remote) participants cooperate using some shared applications whose outputs are displayed on a large-scale and high-resolution tiled-display, which is controlled by a cluster of PC's, one PC per display. In order to make the collaboration effective, each remote participant should be aware of all CSCW activities on the titled display system in real-time. This paper presents a capturing and delivering mechanism of all activities on titled-display system to remote participants in real-time. In the proposed mechanism, the screen images of all PC's are periodically captured and delivered to the Merging Server that maintains separate buffers to store the captured images from the PCs. The mechanism selects one tile image from each buffer, merges the images to make a screen shot of the whole tiled-display, clips a Region of Interest (ROI), compresses and streams it to remote participants in real-time. A technical challenge in the proposed mechanism is how to select a set of tile images, one from each buffer, for merging so that the tile images displayed at the same time on the tiled-display can be properly merged together. This paper presents three selection algorithms; a sequential selection algorithm, a capturing time based algorithm, and a capturing time and visual consistency based algorithm. It also proposes a mechanism of providing several virtual cameras on tiled-display system to remote participants by concurrently clipping several different ROI's from the same merged tiled-display images, and delivering them after compressing with video encoders requested by the remote participants. By interactively changing and resizing his/her own ROI, a remote participant can check the activities on the tiled-display effectively. Experiments on a 3 × 2 tiled-display system show that the proposed merging algorithm can build a tiled-display image stream synchronously, and the ROI-based clipping and delivering mechanism can provide individual views on the tiled-display system to multiple remote participants in real-time.

  20. A Customized DNA Microarray for Microbial Source Tracking ...

    EPA Pesticide Factsheets

    It is estimated that more than 160, 000 miles of rivers and streams in the United States are impaired due to the presence of waterborne pathogens. These pathogens typically originate from human and other animal fecal pollution sources; therefore, a rapid microbial source tracking (MST) method is needed to facilitate water quality assessment and impaired water remediation. We report a novel qualitative DNA microarray technology consisting of 453 probes for the detection of general fecal and host-associated bacteria, viruses, antibiotic resistance, and other environmentally relevant genetic indicators. A novel data normalization and reduction approach is also presented to help alleviate false positives often associated with high-density microarray applications. To evaluate the performance of the approach, DNA and cDNA was isolated from swine, cattle, duck, goose and gull fecal reference samples, as well as soiled poultry liter and raw municipal sewage. Based on nonmetric multidimensional scaling analysis of results, findings suggest that the novel microarray approach may be useful for pathogen detection and identification of fecal contamination in recreational waters. The ability to simultaneously detect a large collection of environmentally important genetic indicators in a single test has the potential to provide water quality managers with a wide range of information in a short period of time. Future research is warranted to measure microarray performance i

  1. A Global User-Driven Model for Tile Prefetching in Web Geographical Information Systems

    PubMed Central

    Pan, Shaoming; Chong, Yanwen; Zhang, Hang; Tan, Xicheng

    2017-01-01

    A web geographical information system is a typical service-intensive application. Tile prefetching and cache replacement can improve cache hit ratios by proactively fetching tiles from storage and replacing the appropriate tiles from the high-speed cache buffer without waiting for a client’s requests, which reduces disk latency and improves system access performance. Most popular prefetching strategies consider only the relative tile popularities to predict which tile should be prefetched or consider only a single individual user's access behavior to determine which neighbor tiles need to be prefetched. Some studies show that comprehensively considering all users’ access behaviors and all tiles’ relationships in the prediction process can achieve more significant improvements. Thus, this work proposes a new global user-driven model for tile prefetching and cache replacement. First, based on all users’ access behaviors, a type of expression method for tile correlation is designed and implemented. Then, a conditional prefetching probability can be computed based on the proposed correlation expression mode. Thus, some tiles to be prefetched can be found by computing and comparing the conditional prefetching probability from the uncached tiles set and, similarly, some replacement tiles can be found in the cache buffer according to multi-step prefetching. Finally, some experiments are provided comparing the proposed model with other global user-driven models, other single user-driven models, and other client-side prefetching strategies. The results show that the proposed model can achieve a prefetching hit rate in approximately 10.6% ~ 110.5% higher than the compared methods. PMID:28085937

  2. Light, Strong Insulating Tiles

    NASA Technical Reports Server (NTRS)

    Cordia, E.; Schirle, J.

    1987-01-01

    Improved lightweight insulating silica/aluminum borosilicate/silicon carbide tiles combine increased tensile strength with low thermal conductivity. Changes in composition substantially improve heat-insulating properties of silica-based refractory tile. Silicon carbide particles act as high-emissivity radiation scatterers in tile material.

  3. Tile Patterns with Logo--Part I: Laying Tile with Logo.

    ERIC Educational Resources Information Center

    Clason, Robert G.

    1990-01-01

    Described is a method for drawing periodic tile patterns using LOGO. Squares, triangles, hexagons, shape filling, and random tile laying are included. These activities incorporate problem solving, programing methods, and the geometry of angles and polygons. (KR)

  4. The Intricate Art of Persian Tiles: An Interview with Jafar Mogadam.

    ERIC Educational Resources Information Center

    Gamble, Harriet

    1998-01-01

    Transcribes an interview with Jafar Mogadam, an Iranian artist who paints Persian tiles. Traces Mogadam's development as an artist and describes how he creates his tile compositions. Provides a brief history of Persian tiles. (DSK)

  5. Room temperature one-step synthesis of microarrays of N-doped flower-like anatase TiO2 composed of well-defined multilayer nanoflakes by Ti anodization

    NASA Astrophysics Data System (ADS)

    Wang, Chenglin; Wang, Mengye; Xie, Kunpeng; Wu, Qi; Sun, Lan; Lin, Zhiqun; Lin, Changjian

    2011-07-01

    Microarrays of N-doped flower-like TiO2 composed of well-defined multilayer nanoflakes were synthesized at room temperature by electrochemical anodization of Ti in NH4F aqueous solution. The TiO2 flowers were of good anatase crystallinity. The effects of anodizing time, applied voltage and NH4F concentration on the flower-like morphology were systematically examined. It was found that the morphologies of the anodized Ti were related to the anodizing time and NH4F concentration. The size and density of the TiO2 flowers could be tuned by changing the applied voltage. The obtained N-doped flower-like TiO2 microarrays exhibited intense absorption in wavelengths ranging from 320 to 800 nm. Under both UV and visible light irradiation, the photocatalytic activity of the N-doped flower-like TiO2 microarrays in the oxidation of methyl orange showed a significant increase compared with that of commercial P25 TiO2 film.

  6. Room temperature one-step synthesis of microarrays of N-doped flower-like anatase TiO2 composed of well-defined multilayer nanoflakes by Ti anodization.

    PubMed

    Wang, Chenglin; Wang, Mengye; Xie, Kunpeng; Wu, Qi; Sun, Lan; Lin, Zhiqun; Lin, Changjian

    2011-07-29

    Microarrays of N-doped flower-like TiO(2) composed of well-defined multilayer nanoflakes were synthesized at room temperature by electrochemical anodization of Ti in NH(4)F aqueous solution. The TiO(2) flowers were of good anatase crystallinity. The effects of anodizing time, applied voltage and NH(4)F concentration on the flower-like morphology were systematically examined. It was found that the morphologies of the anodized Ti were related to the anodizing time and NH(4)F concentration. The size and density of the TiO(2) flowers could be tuned by changing the applied voltage. The obtained N-doped flower-like TiO(2) microarrays exhibited intense absorption in wavelengths ranging from 320 to 800 nm. Under both UV and visible light irradiation, the photocatalytic activity of the N-doped flower-like TiO(2) microarrays in the oxidation of methyl orange showed a significant increase compared with that of commercial P25 TiO(2) film.

  7. Quality control of inkjet technology for DNA microarray fabrication.

    PubMed

    Pierik, Anke; Dijksman, Frits; Raaijmakers, Adrie; Wismans, Ton; Stapert, Henk

    2008-12-01

    A robust manufacturing process is essential to make high-quality DNA microarrays, especially for use in diagnostic tests. We investigated different failure modes of the inkjet printing process used to manufacture low-density microarrays. A single nozzle inkjet spotter was provided with two optical imaging systems, monitoring in real time the flight path of every droplet. If a droplet emission failure is detected, the printing process is automatically stopped. We analyzed over 1.3 million droplets. This information was used to investigate the performance of the inkjet system and to obtain detailed insight into the frequency and causes of jetting failures. Of all the substrates investigated, 96.2% were produced without any system or jetting failures. In 1.6% of the substrates, droplet emission failed and was correctly identified. Appropriate measures could then be taken to get the process back on track. In 2.2%, the imaging systems failed while droplet emission occurred correctly. In 0.1% of the substrates, droplet emission failure that was not timely detected occurred. Thus, the overall yield of the microarray manufacturing process was 99.9%, which is highly acceptable for prototyping.

  8. Characterization and simulation of cDNA microarray spots using a novel mathematical model

    PubMed Central

    Kim, Hye Young; Lee, Seo Eun; Kim, Min Jung; Han, Jin Il; Kim, Bo Kyung; Lee, Yong Sung; Lee, Young Seek; Kim, Jin Hyuk

    2007-01-01

    Background The quality of cDNA microarray data is crucial for expanding its application to other research areas, such as the study of gene regulatory networks. Despite the fact that a number of algorithms have been suggested to increase the accuracy of microarray gene expression data, it is necessary to obtain reliable microarray images by improving wet-lab experiments. As the first step of a cDNA microarray experiment, spotting cDNA probes is critical to determining the quality of spot images. Results We developed a governing equation of cDNA deposition during evaporation of a drop in the microarray spotting process. The governing equation included four parameters: the surface site density on the support, the extrapolated equilibrium constant for the binding of cDNA molecules with surface sites on glass slides, the macromolecular interaction factor, and the volume constant of a drop of cDNA solution. We simulated cDNA deposition from the single model equation by varying the value of the parameters. The morphology of the resulting cDNA deposit can be classified into three types: a doughnut shape, a peak shape, and a volcano shape. The spot morphology can be changed into a flat shape by varying the experimental conditions while considering the parameters of the governing equation of cDNA deposition. The four parameters were estimated by fitting the governing equation to the real microarray images. With the results of the simulation and the parameter estimation, the phenomenon of the formation of cDNA deposits in each type was investigated. Conclusion This study explains how various spot shapes can exist and suggests which parameters are to be adjusted for obtaining a good spot. This system is able to explore the cDNA microarray spotting process in a predictable, manageable and descriptive manner. We hope it can provide a way to predict the incidents that can occur during a real cDNA microarray experiment, and produce useful data for several research applications involving cDNA microarrays. PMID:18096047

  9. Polymerization Behavior and Polymer Properties of Eosin-Mediated Surface Modification Reactions.

    PubMed

    Avens, Heather J; Randle, Thomas James; Bowman, Christopher N

    2008-10-17

    Surface modification by surface-mediated polymerization necessitates control of the grafted polymer film thicknesses to achieve the desired property changes. Here, a microarray format is used to assess a range of reaction conditions and formulations rapidly in regards to the film thicknesses achieved and the polymerization behavior. Monomer formulations initiated by eosin conjugates with varying concentrations of poly(ethylene glycol) diacrylate (PEGDA), N-methyldiethanolamine (MDEA), and 1-vinyl-2-pyrrolidone (VP) were evaluated. Acrylamide with MDEA or ascorbic acid as a coinitiator was also investigated. The best formulation was found to be 40 wt% acrylamide with MDEA which yielded four to eight fold thicker films (maximum polymer thickness increased from 180 nm to 1420 nm) and generated visible films from 5-fold lower eosin surface densities (2.8 vs. 14 eosins/µm(2)) compared to a corresponding PEGDA formulation. Using a microarray format to assess multiple initiator surface densities enabled facile identification of a monomer formulation that yields the desired polymer properties and polymerization behavior across the requisite range of initiator surface densities.

  10. Polymerization Behavior and Polymer Properties of Eosin-Mediated Surface Modification Reactions

    PubMed Central

    Avens, Heather J.; Randle, Thomas James; Bowman, Christopher N.

    2008-01-01

    Surface modification by surface-mediated polymerization necessitates control of the grafted polymer film thicknesses to achieve the desired property changes. Here, a microarray format is used to assess a range of reaction conditions and formulations rapidly in regards to the film thicknesses achieved and the polymerization behavior. Monomer formulations initiated by eosin conjugates with varying concentrations of poly(ethylene glycol) diacrylate (PEGDA), N-methyldiethanolamine (MDEA), and 1-vinyl-2-pyrrolidone (VP) were evaluated. Acrylamide with MDEA or ascorbic acid as a coinitiator was also investigated. The best formulation was found to be 40 wt% acrylamide with MDEA which yielded four to eight fold thicker films (maximum polymer thickness increased from 180 nm to 1420 nm) and generated visible films from 5-fold lower eosin surface densities (2.8 vs. 14 eosins/µm2) compared to a corresponding PEGDA formulation. Using a microarray format to assess multiple initiator surface densities enabled facile identification of a monomer formulation that yields the desired polymer properties and polymerization behavior across the requisite range of initiator surface densities. PMID:19838291

  11. 44. East tile gauge on south pier. Each square tile ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    44. East tile gauge on south pier. Each square tile is 4' in size. Top left section of 4' square eagle section - Duluth Ship Canal, South Pier, North end of Minnesota Point & Canal Park, Duluth, St. Louis County, MN

  12. 47. East tile gauge on south pier. Each square tile ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    47. East tile gauge on south pier. Each square tile is 4' in size. Middle right section of 4' square eagle section - Duluth Ship Canal, South Pier, North end of Minnesota Point & Canal Park, Duluth, St. Louis County, MN

  13. 46. East tile gauge on south pier. Each square tile ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    46. East tile gauge on south pier. Each square tile is 4' in size. Lower right section of 4' square eagle section - Duluth Ship Canal, South Pier, North end of Minnesota Point & Canal Park, Duluth, St. Louis County, MN

  14. 43. East tile gauge on south pier. Each square tile ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    43. East tile gauge on south pier. Each square tile is 4' in size. Eagle itself in 4' square eagle section - Duluth Ship Canal, South Pier, North end of Minnesota Point & Canal Park, Duluth, St. Louis County, MN

  15. 45. East tile gauge on south pier. Each square tile ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    45. East tile gauge on south pier. Each square tile is 4' in size. Lower left section of 4' square eagel section - Duluth Ship Canal, South Pier, North end of Minnesota Point & Canal Park, Duluth, St. Louis County, MN

  16. 51. East tile gauge on south pier. Each square tile ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    51. East tile gauge on south pier. Each square tile is 4' in size. Lower end of cross second from bottom - Duluth Ship Canal, South Pier, North end of Minnesota Point & Canal Park, Duluth, St. Louis County, MN

  17. Tile-based Level of Detail for the Parallel Age

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Niski, K; Cohen, J D

    Today's PCs incorporate multiple CPUs and GPUs and are easily arranged in clusters for high-performance, interactive graphics. We present an approach based on hierarchical, screen-space tiles to parallelizing rendering with level of detail. Adapt tiles, render tiles, and machine tiles are associated with CPUs, GPUs, and PCs, respectively, to efficiently parallelize the workload with good resource utilization. Adaptive tile sizes provide load balancing while our level of detail system allows total and independent management of the load on CPUs and GPUs. We demonstrate our approach on parallel configurations consisting of both single PCs and a cluster of PCs.

  18. Geopolymers as potential repair material in tiles conservation

    NASA Astrophysics Data System (ADS)

    Geraldes, Catarina F. M.; Lima, Augusta M.; Delgado-Rodrigues, José; Mimoso, João Manuel; Pereira, Sílvia R. M.

    2016-03-01

    The restoration materials currently used to fill gaps in historical architectural tiles (e.g. lime or organic resin pastes) usually show serious drawbacks in terms of compatibility, effectiveness or durability. The existing solutions do not fully protect Portuguese faïence tiles ( azulejos) in outdoor conditions and frequently result in further deterioration. Geopolymers can be a potential solution for tile lacunae infill, given the chemical-mineralogical similitude to the ceramic body, and also the durability and versatile range of physical properties that can be obtained through the manipulation of their formulation and curing conditions. This work presents and discusses the viability of the use of geopolymeric pastes to fill lacunae in tiles or to act as "cold" cast ceramic tile surrogates reproducing missing tile fragments. The formulation of geopolymers, namely the type of activators, the alumino-silicate source, the quantity of water required for adequate workability and curing conditions, was studied. The need for post-curing desalination was also considered envisaging their application in the restoration of outdoor historical architectural tiles frequently exposed to adverse environmental conditions. The possible advantages and disadvantages of the use of geopolymers in the conservation of tiles are also discussed. The results obtained reveal that geopolymers pastes are a promising material for the restoration of tiles, when compared to other solutions currently in use.

  19. Interference Lattice-based Loop Nest Tilings for Stencil Computations

    NASA Technical Reports Server (NTRS)

    VanderWijngaart, Rob F.; Frumkin, Michael

    2000-01-01

    A common method for improving performance of stencil operations on structured multi-dimensional discretization grids is loop tiling. Tile shapes and sizes are usually determined heuristically, based on the size of the primary data cache. We provide a lower bound on the numbers of cache misses that must be incurred by any tiling, and a close achievable bound using a particular tiling based on the grid interference lattice. The latter tiling is used to derive highly efficient loop orderings. The total number of cache misses of a code is the sum of (necessary) cold misses and misses caused by elements being dropped from the cache between successive loads (replacement misses). Maximizing temporal locality is equivalent to minimizing replacement misses. Temporal locality of loop nests implementing stencil operations is optimized by tilings that avoid data conflicts. We divide the loop nest iteration space into conflict-free tiles, derived from the cache miss equation. The tiling involves the definition of the grid interference lattice an equivalence class of grid points whose images in main memory map to the same location in the cache-and the construction of a special basis for the lattice. Conflicts only occur on the boundaries of the tiles, unless the tiles are too thin. We show that the surface area of the tiles is bounded for grids of any dimensionality, and for caches of any associativity, provided the eccentricity of the fundamental parallelepiped (the tile spanned by the basis) of the lattice is bounded. Eccentricity is determined by two factors, aspect ratio and skewness. The aspect ratio of the parallelepiped can be bounded by appropriate array padding. The skewness can be bounded by the choice of a proper basis. Combining these two strategies ensures that pathologically thin tiles are avoided. They do not, however, minimize replacement misses per se. The reason is that tile visitation order influences the number of data conflicts on the tile boundaries. If two adjacent tiles are visited successively, there will be no replacement misses on the shared boundary. The iteration space may be covered with pencils larger than the size of the cache while avoiding data conflicts if the pencils are traversed by a scanning-face method. Replacement misses are incurred only on the boundaries of the pencils, and the number of misses is minimized by maximizing the volume of the scanning face, not the volume of the tile. We present an algorithm for constructing the most efficient scanning face for a given grid and stencil operator. In two dimensions it is based on a continued fraction algorithm. In three dimensions it follows Voronoi's successive minima algorithm. We show experimental results of using the scanning face, and compare with canonical loop orderings.

  20. Research on Reasons for Repeated Falling of Tiles in Internal Walls of Construction

    NASA Astrophysics Data System (ADS)

    Xu, LiBin; Chen, Shangwei; He, Xinzhou; Zhu, Guoliang

    2018-03-01

    In view of the quality problem of repeated falling of facing tiles in some construction, the essay had a comparative trial in laboratory on cement mortar which is often used to paste tiles, special tile mortar and dry-hang glue, and measured durability of tile adhesive mortar through freezing and thawing tests. The test results indicated that ordinary cement mortar cannot meet standards due to reasons like big shrinkage and low adhesive. In addition, the ten times of freezing and thawing tests indicated that ordinary cement mortar would directly shell and do not have an adhesive force, and moreover, adhesive force of special tile mortar would reduce. Thus, for tiles of large size which are used for walls, dry-hang techniques are recommended to be used.

  1. Improve load balancing and coding efficiency of tiles in high efficiency video coding by adaptive tile boundary

    NASA Astrophysics Data System (ADS)

    Chan, Chia-Hsin; Tu, Chun-Chuan; Tsai, Wen-Jiin

    2017-01-01

    High efficiency video coding (HEVC) not only improves the coding efficiency drastically compared to the well-known H.264/AVC but also introduces coding tools for parallel processing, one of which is tiles. Tile partitioning is allowed to be arbitrary in HEVC, but how to decide tile boundaries remains an open issue. An adaptive tile boundary (ATB) method is proposed to select a better tile partitioning to improve load balancing (ATB-LoadB) and coding efficiency (ATB-Gain) with a unified scheme. Experimental results show that, compared to ordinary uniform-space partitioning, the proposed ATB can save up to 17.65% of encoding times in parallel encoding scenarios and can reduce up to 0.8% of total bit rates for coding efficiency.

  2. Structural tests on space shuttle thermal protection system constructed with nondensified and densified Li 900 and LI 2200 tile

    NASA Technical Reports Server (NTRS)

    Williams, J. G.

    1981-01-01

    Structural tests were conducted on thermal protection systems (TPS) LI 900 and LI 2200 tiles and .41 cm and .23 cm thick strain isolation pads. The bond surface of selected tiles was densified to obtain improved strength. Four basic types of experiments were conducted including tension tests, substrate mismatch (initial imperfection) tests, tension loads eccentrically applied, and pressure loads applied rapidly to the tile top surface. A small initial imperfection mismatch (2.29 m spherical radius on the substrate) did not influence significantly the ultimate failure strength. Densification of the tile bond region improved the strength of TPS constructed both of LI 900 tile and of LI 2200 tile. Pressure shock conditions studied did not significantly affect the TPS strength.

  3. Retrosynthetic Analysis-Guided Breaking Tile Symmetry for the Assembly of Complex DNA Nanostructures.

    PubMed

    Wang, Pengfei; Wu, Siyu; Tian, Cheng; Yu, Guimei; Jiang, Wen; Wang, Guansong; Mao, Chengde

    2016-10-11

    Current tile-based DNA self-assembly produces simple repetitive or highly symmetric structures. In the case of 2D lattices, the unit cell often contains only one basic tile because the tiles often are symmetric (in terms of either the backbone or the sequence). In this work, we have applied retrosynthetic analysis to determine the minimal asymmetric units for complex DNA nanostructures. Such analysis guides us to break the intrinsic structural symmetries of the tiles to achieve high structural complexities. This strategy has led to the construction of several DNA nanostructures that are not accessible from conventional symmetric tile designs. Along with previous studies, herein we have established a set of four fundamental rules regarding tile-based assembly. Such rules could serve as guidelines for the design of DNA nanostructures.

  4. Tile drainage as karst: Conduit flow and diffuse flow in a tile-drained watershed

    USGS Publications Warehouse

    Schilling, K.E.; Helmers, M.

    2008-01-01

    The similarity of tiled-drained watersheds to karst drainage basins can be used to improve understanding of watershed-scale nutrient losses from subsurface tile drainage networks. In this study, short-term variations in discharge and chemistry were examined from a tile outlet collecting subsurface tile flow from a 963 ha agricultural watershed. Study objectives were to apply analytical techniques from karst springs to tile discharge to evaluate water sources and estimate the loads of agricultural pollutants discharged from the tile with conduit, intermediate and diffuse flow regimes. A two-member mixing model using nitrate, chloride and specific conductance was used to distinguish rainwater versus groundwater inputs. Results indicated that groundwater comprised 75% of the discharge for a three-day storm period and rainwater was primarily concentrated during the hydrograph peak. A contrasting pattern of solute concentrations and export loads was observed in tile flow. During base flow periods, tile flow consisted of diffuse flow from groundwater sources and contained elevated levels of nitrate, chloride and specific conductance. During storm events, suspended solids and pollutants adhered to soil surfaces (phosphorus, ammonium and organic nitrogen) were concentrated and discharged during the rapid, conduit flow portion of the hydrograph. During a three-day period, conduit flow occurred for 5.6% of the time but accounted for 16.5% of the total flow. Nitrate and chloride were delivered primarily with diffuse flow (more than 70%), whereas 80-94% of total suspended sediment, phosphorus and ammonium were exported with conduit and intermediate flow regimes. Understanding the water sources contributing to tile drainage and the manner by which pollutant discharge occurs from these systems (conduit, intermediate or diffuse flow) may be useful for designing, implementing and evaluating non-point source reduction strategies in tile-drained landscapes. ?? 2007 Elsevier B.V. All rights reserved.

  5. Dual permeability modeling of tile drain management influences on hydrologic and nutrient transport characteristics in macroporous soil

    NASA Astrophysics Data System (ADS)

    Frey, Steven K.; Hwang, Hyoun-Tae; Park, Young-Jin; Hussain, Syed I.; Gottschall, Natalie; Edwards, Mark; Lapen, David R.

    2016-04-01

    Tile drainage management is considered a beneficial management practice (BMP) for reducing nutrient loads in surface water. In this study, 2-dimensional dual permeability models were developed to simulate flow and transport following liquid swine manure and rhodamine WT (strongly sorbing) tracer application on macroporous clay loam soils under controlled (CD) and free drainage (FD) tile management. Dominant flow and transport characteristics were successfully replicated, including higher and more continuous tile discharge and lower peak rhodamine WT concentrations in FD tile effluent; in relation to CD, where discharge was intermittent, peak rhodamine concentrations higher, and mass exchange from macropores into the soil matrix greater. Explicit representation of preferential flow was essential, as macropores transmitted >98% of surface infiltration, tile flow, and tile solute loads for both FD and CD. Incorporating an active 3rd type lower boundary condition that facilitated groundwater interaction was imperative for simulating CD, as the higher (relative to FD) water table enhanced water and soluble nutrient movement from the soil profile into deeper groundwater. Scenario analysis revealed that in conditions where slight upwards hydraulic gradients exist beneath tiles, groundwater upwelling can influence the concentration of surface derived solutes in tile effluent under FD conditions; whereas the higher and flatter CD water table can restrict groundwater upwelling. Results show that while CD can reduce tile discharge, it can also lead to an increase in surface-application derived nutrient concentrations in tile effluent and hence surface water receptors, and it can promote NO3 loading into groundwater. This study demonstrates dual permeability modeling as a tool for increasing the conceptual understanding of tile drainage BMPs.

  6. Paster (brick and tile) 773.884; Tile Placer (brick and tile) 573.687; Tile Sorter (brick and tile) 573.887 -- Technical Report on Standardization of the General Aptitude Test Battery.

    ERIC Educational Resources Information Center

    Manpower Administration (DOL), Washington, DC. U.S. Training and Employment Service.

    The United States Training and Employment Service General Aptitude Test Battery (GATB), first published in 1947, has been included in a continuing program of research to validate the tests against success in many different occupations. The GATB consists of 12 tests which measure nine aptitudes: General Learning Ability; Verbal Aptitude; Numerical…

  7. Bottlenecks to coral recovery in the Seychelles

    NASA Astrophysics Data System (ADS)

    Chong-Seng, K. M.; Graham, N. A. J.; Pratchett, M. S.

    2014-06-01

    Processes that affect recovery of coral assemblages require investigation because coral reefs are experiencing a diverse array of more frequent disturbances. Potential bottlenecks to coral recovery include limited larval supply, low rates of settlement, and high mortality of new recruits or juvenile corals. We investigated spatial variation in local abundance of scleractinian corals in the Seychelles at three distinct life history stages (recruits, juveniles, and adults) on reefs with differing benthic conditions. Following widespread coral loss due to the 1998 bleaching event, some reefs are recovering (i.e., relatively high scleractinian coral cover: `coral-dominated'), some reefs have low cover of living macrobenthos and unconsolidated rubble substrates (`rubble-dominated'), and some reefs have high cover of macroalgae (`macroalgal-dominated'). Rates of coral recruitment to artificial settlement tiles were similar across all reef conditions, suggesting that larval supply does not explain differential coral recovery across the three reef types. However, acroporid recruits were absent on macroalgal-dominated reefs (0.0 ± 0.0 recruits tile-1) in comparison to coral-dominated reefs (5.2 ± 1.6 recruits tile-1). Juvenile coral colony density was significantly lower on macroalgal-dominated reefs (2.4 ± 1.1 colonies m-2), compared to coral-dominated reefs (16.8 ± 2.4 m-2) and rubble-dominated reefs (33.1 ± 7.3 m-2), suggesting that macroalgal-dominated reefs have either a bottleneck to successful settlement on the natural substrates or a high post-settlement mortality bottleneck. Rubble-dominated reefs had very low cover of adult corals (10.0 ± 1.7 %) compared to coral-dominated reefs (33.4 ± 3.6 %) despite no statistical difference in their juvenile coral densities. A bottleneck caused by low juvenile colony survivorship on unconsolidated rubble-dominated reefs is possible, or alternatively, recruitment to rubble-dominated reefs has only recently begun. This study identified bottlenecks to recovery of coral assemblages that varied depending on post-disturbance habitat condition.

  8. 40 CFR 427.70 - Applicability; description of the asbestos floor tile subcategory.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... asbestos floor tile subcategory. 427.70 Section 427.70 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) EFFLUENT GUIDELINES AND STANDARDS ASBESTOS MANUFACTURING POINT SOURCE CATEGORY Asbestos Floor Tile Subcategory § 427.70 Applicability; description of the asbestos floor tile subcategory...

  9. 40 CFR 427.70 - Applicability; description of the asbestos floor tile subcategory.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... asbestos floor tile subcategory. 427.70 Section 427.70 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) EFFLUENT GUIDELINES AND STANDARDS (CONTINUED) ASBESTOS MANUFACTURING POINT SOURCE CATEGORY Asbestos Floor Tile Subcategory § 427.70 Applicability; description of the asbestos floor tile...

  10. 40 CFR 427.70 - Applicability; description of the asbestos floor tile subcategory.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... asbestos floor tile subcategory. 427.70 Section 427.70 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) EFFLUENT GUIDELINES AND STANDARDS ASBESTOS MANUFACTURING POINT SOURCE CATEGORY Asbestos Floor Tile Subcategory § 427.70 Applicability; description of the asbestos floor tile subcategory...

  11. 40 CFR 427.70 - Applicability; description of the asbestos floor tile subcategory.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... asbestos floor tile subcategory. 427.70 Section 427.70 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) EFFLUENT GUIDELINES AND STANDARDS (CONTINUED) ASBESTOS MANUFACTURING POINT SOURCE CATEGORY Asbestos Floor Tile Subcategory § 427.70 Applicability; description of the asbestos floor tile...

  12. 40 CFR 427.70 - Applicability; description of the asbestos floor tile subcategory.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... asbestos floor tile subcategory. 427.70 Section 427.70 Protection of Environment ENVIRONMENTAL PROTECTION AGENCY (CONTINUED) EFFLUENT GUIDELINES AND STANDARDS (CONTINUED) ASBESTOS MANUFACTURING POINT SOURCE CATEGORY Asbestos Floor Tile Subcategory § 427.70 Applicability; description of the asbestos floor tile...

  13. Spectral response data for development of cool coloured tile coverings

    NASA Astrophysics Data System (ADS)

    Libbra, Antonio; Tarozzi, Luca; Muscio, Alberto; Corticelli, Mauro A.

    2011-03-01

    Most ancient or traditional buildings in Italy show steep-slope roofs covered by red clay tiles. As the rooms immediately below the roof are often inhabited in historical or densely urbanized centres, the combination of low solar reflectance of tile coverings and low thermal inertia of either wooden roof structures or sub-tile insulation panels makes summer overheating a major problem. The problem can be mitigated by using tiles coated with cool colours, that is colours with the same spectral response of clay tiles in the visible, but highly reflecting in the near infrared range, which includes more than half of solar radiation. Cool colours can yield the same visible aspect of common building surfaces, but higher solar reflectance. Studies aimed at developing cool colour tile coverings for traditional Italian buildings have been started. A few coating solutions with the typical red terracotta colour have been produced and tested in the laboratory, using easily available materials. The spectral response and the solar reflectance have been measured and compared with that of standard tiles.

  14. Archimedean Voronoi spiral tilings

    NASA Astrophysics Data System (ADS)

    Yamagishi, Yoshikazu; Sushida, Takamichi

    2018-01-01

    We study the transition of the number of spirals (called parastichy in the theory of phyllotaxis) within a Voronoi tiling for Archimedean spiral lattices. The transition of local parastichy numbers within a tiling is regarded as a transition at the base site point in a continuous family of tilings. This gives a natural description of the quasiperiodic structure of the grain boundaries. It is proved that the number of tiles in the grain boundaries are denominators of rational approximations of the argument (called the divergence angle) of the generator. The local parastichy numbers are non-decreasing functions of the plastochron parameter. The bifurcation diagram of local parastichy numbers has a Farey tree structure. We also prove Richards’ formula of spiral phyllotaxis in the case of Archimedean Voronoi spiral tilings, and show that, if the divergence angle is a quadratic irrational number, then the shapes of tiles in the grain boundaries are close to rectangles. If the divergence angle is linearly equivalent to the golden section, then the shape of tiles in the grain boundaries is close to square.

  15. Tile Drainage Expansion Detection using Satellite Soil Moisture Dynamics

    NASA Astrophysics Data System (ADS)

    Jacobs, J. M.; Cho, E.; Jia, X.

    2017-12-01

    In the past two decades, tile drainage installation has accelerated throughout the Red River of the North Basin (RRB) in parts of western Minnesota, eastern North Dakota, and a small area of northeastern South Dakota, because the flat topography and low-permeability soils in this region necessitated the removal of excess water to improve crop production. Interestingly, streamflow in the Red River has markedly increased and six of 13 major floods during the past century have occurred since the late 1990s. It has been suggested that the increase in RRB flooding could be due to change in agricultural practices, including extensive tile drainage installation. Reliable information on existing and future tile drainage installation is greatly needed to capture the rapid extension of tile drainage systems and to locate tile drainage systems in the north central U.S. including the RRB region. However, there are few reliable data of tile drainage installation records, except tile drainage permit records in the Bois de Sioux watershed (a sub-basin in southern part of the RRB where permits are required for tile drainage installation). This study presents a tile drainage expansion detection method based on a physical principle that the soil-drying rate may increase with increasing tile drainage for a given area. In order to capture the rate of change in soil drying rate with time over entire RRB (101,500 km2), two satellite-based microwave soil moisture records from the Advanced Microwave Scanning Radiometer for Earth Observing System (AMSR-E) and AMSR2 were used during 2002 to 2016. In this study, a sub-watershed level (HUC10) potential tile drainage growth map was developed and the results show good agreement with tile drainage permit records of six sub-watersheds in the Bois de Sioux watershed. Future analyses will include improvement of the potential tile drainage map through additional information using optical- and thermal-based sensor products and evaluation of its hydrological impacts on intensity, duration, and frequency of extreme streamflow from watershed to basin scale.

  16. Effect of load eccentricity and substructure deformation on ultimate strength of shuttle orbiter thermal protection system

    NASA Technical Reports Server (NTRS)

    Sawyer, J. W.

    1981-01-01

    The effect of load eccentricity and substructure deformation on the ultimate strength and stress displacement properties of the shuttle orbiter thermal protection system (TPS) was determined. The LI-900 Reusable Surface Insulation (RSI) tiles mounted on the .41 cm thick Strain Isolator Pad (SIP) were investigated. Substructure deformations reduce the ultimate strength of the SIP/tile TPS and increase the scatter in the ultimate strength data. Substructure deformations that occur unsymmetric to the tile can cause the tile to rotate when subjected to a uniform applied load. Load eccentricity reduces SIP/tile TPS ultimate strength and causes tile rotation.

  17. Computerized Machine for Cutting Space Shuttle Thermal Tiles

    NASA Technical Reports Server (NTRS)

    Ramirez, Luis E.; Reuter, Lisa A.

    2009-01-01

    A report presents the concept of a machine aboard the space shuttle that would cut oversized thermal-tile blanks to precise sizes and shapes needed to replace tiles that were damaged or lost during ascent to orbit. The machine would include a computer-controlled jigsaw enclosed in a clear acrylic shell that would prevent escape of cutting debris. A vacuum motor would collect the debris into a reservoir and would hold a tile blank securely in place. A database stored in the computer would contain the unique shape and dimensions of every tile. Once a broken or missing tile was identified, its identification number would be entered into the computer, wherein the cutting pattern associated with that number would be retrieved from the database. A tile blank would be locked into a crib in the machine, the shell would be closed (proximity sensors would prevent activation of the machine while the shell was open), and a "cut" command would be sent from the computer. A blade would be moved around the crib like a plotter, cutting the tile to the required size and shape. Once the tile was cut, an astronaut would take a space walk for installation.

  18. Water table management reduces tile nitrate loss in continuous corn and in a soybean-corn rotation.

    PubMed

    Drury, C F; Tan, C S; Gaynor, J D; Reynolds, W D; Welacky, T W; Oloya, T O

    2001-10-25

    Water table management systems can be designed to alleviate soil water excesses and deficits, as well as reduce nitrate leaching losses in tile discharge. With this in mind, a standard tile drainage (DR) system was compared over 8 years (1991 to 1999) to a controlled tile drainage/subirrigation (CDS) system on a low-slope (0.05 to 0.1%) Brookston clay loam soil (Typic Argiaquoll) in southwestern Ontario, Canada. In the CDS system, tile discharge was controlled to prevent excessive drainage, and water was pumped back up the tile lines (subirrigation) to replenish the crop root zone during water deficit periods. In the first phase of the study (1991 to 1994), continuous corn (Zea mays, L.) was grown with annual nitrogen (N) fertilizer inputs as per local soil test recommendations. In the second phase (1995 to 1999), a soybean (Glycine max L., Merr.)-corn rotation was used with N fertilizer added only during the two corn years. In Phase 1 when continuous corn was grown, CDS reduced total tile discharge by 26% and total nitrate loss in tile discharge by 55%, compared to DR. In addition, the 4-year flow weighted mean (FWM) nitrate concentration in tile discharge exceeded the Canadian drinking water guideline (10 mg N l(-1)) under DR (11.4 mg N l(-1)), but not under CDS (7.0 mg N l(-1)). In Phase 2 during the soybean-corn rotation, CDS reduced total tile discharge by 38% and total nitrate loss in tile discharge by 66%, relative to DR. The 4-year FWM nitrate concentration during Phase 2 in tile discharge was below the drinking water guideline for both DR (7.3 mg N l(-1)) and CDS (4.0 mg N l(-1)). During both phases of the experiment, the CDS treatment caused only minor increases in nitrate loss in surface runoff relative to DR. Hence CDS decreased FWM nitrate concentrations, total drainage water loss, and total nitrate loss in tile discharge relative to DR. In addition, soybean-corn rotation reduced FWM nitrate concentrations and total nitrate loss in tile discharge relative to continuous corn. CDS and crop rotations with reduced N fertilizer inputs can thus improve the quality of tile discharge water substantially.

  19. 40 CFR 63.8535 - Am I subject to this subpart?

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... manufacturing facility is a plant site that manufactures pressed floor tile, pressed wall tile, other pressed tile, or sanitaryware (e.g., sinks and toilets). Clay ceramics manufacturing facilities typically process clay, shale, and various additives; form the processed materials into tile or sanitaryware shapes...

  20. 40 CFR 63.8535 - Am I subject to this subpart?

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... manufacturing facility is a plant site that manufactures pressed floor tile, pressed wall tile, other pressed tile, or sanitaryware (e.g., sinks and toilets). Clay ceramics manufacturing facilities typically process clay, shale, and various additives; form the processed materials into tile or sanitaryware shapes...

  1. 40 CFR 63.8535 - Am I subject to this subpart?

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... manufacturing facility is a plant site that manufactures pressed floor tile, pressed wall tile, other pressed tile, or sanitaryware (e.g., sinks and toilets). Clay ceramics manufacturing facilities typically process clay, shale, and various additives; form the processed materials into tile or sanitaryware shapes...

  2. 40 CFR 63.8535 - Am I subject to this subpart?

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... manufacturing facility is a plant site that manufactures pressed floor tile, pressed wall tile, other pressed tile, or sanitaryware (e.g., sinks and toilets). Clay ceramics manufacturing facilities typically process clay, shale, and various additives; form the processed materials into tile or sanitaryware shapes...

  3. 40 CFR 63.8535 - Am I subject to this subpart?

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... manufacturing facility is a plant site that manufactures pressed floor tile, pressed wall tile, other pressed tile, or sanitaryware (e.g., sinks and toilets). Clay ceramics manufacturing facilities typically process clay, shale, and various additives; form the processed materials into tile or sanitaryware shapes...

  4. Strong parameterization and coordination encirclements of graph of Penrose tiling vertices

    NASA Astrophysics Data System (ADS)

    Shutov, A. V.; Maleev, A. V.

    2017-07-01

    The coordination encirclements in a graph of Penrose tiling vertices have been investigated based on the analysis of vertice parameters. A strong parameterization of these vertices is developed in the form of a tiling of a parameter set in the region corresponding to different first coordination encirclements of vertices. An algorithm for constructing tilings of a set of parameters determining different coordination encirclements in a graph of Penrose tiling vertices of order n is proposed.

  5. Modal analysis and dynamic stresses for acoustically excited Shuttle insulation tiles

    NASA Technical Reports Server (NTRS)

    Ojalvo, I. U.; Ogilvie, P. I.

    1976-01-01

    The thermal protection system of the Space Shuttle consists of thousands of separate insulation tiles, of varying thicknesses, bonded to the orbiter's surface through a soft strain-isolation pad which is bonded, in turn, to the vehicle's stiffened metallic skin. A modal procedure for obtaining the acoustically induced RMS stress in these comparatively thick tiles is described. The modes employed are generated by a previously developed iterative procedure which converges rapidly for the combined system of tiles and primary structure considered. Each tile is idealized by several hundred three-dimensional finite elements and all tiles on a given panel interact dynamically. Acoustic response results from the present analyses are presented. Comparisons with other analytical results and measured modal data for a typical Shuttle panel, both with and without tiles, are made, and the agreement is good.

  6. Combination of geochemical and hydrobiological tracers for the analysis of runoff generating processes in a lowland catchment

    NASA Astrophysics Data System (ADS)

    Faber, Claas; Wu, Naicheng; Ulrich, Uta; Fohrer, Nicola

    2015-04-01

    Since lowlands are characterised by flat topography and low hydraulic gradients, groundwater inflow has a large influence to streamflow generation in such catchments. In catchments with intense agricultural land use, artificial drainages are often another major contributor to streamflow. They shorten the soil passage and thus change the matter retention potential as well as runoff dynamics of a catchment. Contribution of surface runoff to streamflow is usually less important in volume. However, due to high concentrations of agrochemicals, surface runoff can constitute an important entry pathway into water bodies, especially if strong precipitation events coincide with fertilizer or pesticide application. The DFG funded project "Separating surface runoff from tile drainage flow in agricultural lowland catchments based on diatoms to improve modelled runoff components and phosphorous transport" investigates prevalent processes in this context in a 50 km² lowland catchment (Kielstau, Schleswig-Holstein, Germany) with the goal of improving existing models. End Member Mixing Analysis (EMMA) is used in the project to determine the relative importance of groundwater, tile drainage and surface runoff to streamflow at daily time steps. It became apparent that geochemical tracers are suitable for distinguishing surface runoff, but are weak for the separation of tile drainage and groundwater influence. We attribute this to the strong and complex interaction between soil water and shallow groundwater tables in the catchment. Recent studies (e.g. Pfister et al. 2011, Tauro et al. 2013) show the potential of diatoms as indicators for hydrological processes. Since we found diatoms to be suitable for the separation of tile drainage and stream samples (Wu et al., unpublished data) in our catchment, we are able to include diatom derived indices (e.g. density, species moisture indices, diversity indices) as traces in EMMA. Our results show that the inclusion of diatom data in the EMMA dataset improves the ability to distinguish tile drainage, groundwater and surface runoff influence to streamflow in our agriculturally dominated lowland catchment. Keywords: tile drainage, surface runoff, groundwater, hydrograph separation, EMMA, dia-toms, water quality, lowland catchments References: Pfister L, Wetzel CE, Martínez-Carreras N, Frentress J, Ector L, Hoffmann L, McDonnell JJ. 2011. Do diatoms run downhill? Using biodiversity of terrestrial and aquatic diatoms to identify hydrological connectivity between aquatic zones in Luxembourg. AGU Fall Meeting. Tauro F, Martínez-Carreras N, Wetzel CE, Hissler C, Barnich F, Frentress J, Ector L, Hoff-mann L, McDonnell JJ, Pfister L. 2013. Fluorescent diatoms as hydrological tracers: a proof of concept percolation experiment. EGU abstract, EGU2013-7687-4.

  7. GROWTH EVALUATION OF FUNGI (PENICILLIUM AND ASPERGILLUS SPP.) ON CEILING TILES

    EPA Science Inventory

    The paper gives results of an evaluation of the potential for fungal growth on four different ceiling tiles in static chambers. It was found that even new ceiling tiles supported fungal growth under favorable conditions. Used ceiling tiles appeared to be more susceptible to funga...

  8. Effect of tile effluent on nutrient concentration and retention efficiency in agricultural drainage ditches

    USDA-ARS?s Scientific Manuscript database

    Tile drainage is a common water management practice in many agricultural landscapes in the Midwestern United States. Drainage ditches regularly receive water from agricultural fields through these tile drains. This field-scale study was conducted to determine the impact of tile discharge on ambient ...

  9. 7 CFR 28.956 - Prescribed fees.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    .... sample 42.00 3.0Furnishing standard color tiles for calibrating cotton colormeters, per set of five tiles... outside continental United States 165.00 3.1Furnishing single color calibration tiles for use with specific instruments or as replacements in above sets, each tile: a. f.o.b. Memphis, Tennessee 22.00 b...

  10. Two Views of Islam: Ceramic Tile Design and Miniatures.

    ERIC Educational Resources Information Center

    Macaulay, Sara Grove

    2001-01-01

    Describes an art project focusing on Islamic art that consists of two parts: (1) ceramic tile design; and (2) Islamic miniatures. Provides background information on Islamic art and step-by-step instructions for designing the Islamic tile and miniature. Includes learning objectives and resources on Islamic tile miniatures. (CMK)

  11. 7 CFR 28.956 - Prescribed fees.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    .... sample 42.00 3.0Furnishing standard color tiles for calibrating cotton colormeters, per set of five tiles... outside continental United States 165.00 3.1Furnishing single color calibration tiles for use with specific instruments or as replacements in above sets, each tile: a. f.o.b. Memphis, Tennessee 22.00 b...

  12. Machine Learning Techniques for Persuasion Detection in Conversation

    DTIC Science & Technology

    2010-06-01

    files maintained the original post and tile ordering within each transcript. These files were each internally shuffled prior to creating test and...of the number of post or tiles. The other 90% was used for training data. Each post and each tile appeared in only one of the 10 test sets. Each post ...concatenating 5 test sets and pairing it with the 6th test set. This process was conducted for both posts and tiles. The shortest transcript (19 posts , 0 tiles

  13. Global Swath and Gridded Data Tiling

    NASA Technical Reports Server (NTRS)

    Thompson, Charles K.

    2012-01-01

    This software generates cylindrically projected tiles of swath-based or gridded satellite data for the purpose of dynamically generating high-resolution global images covering various time periods, scaling ranges, and colors called "tiles." It reconstructs a global image given a set of tiles covering a particular time range, scaling values, and a color table. The program is configurable in terms of tile size, spatial resolution, format of input data, location of input data (local or distributed), number of processes run in parallel, and data conditioning.

  14. Numerical Simulation of Ballistic Impact of Layered Aluminum Nitride Ceramic

    DTIC Science & Technology

    2015-09-01

    tile(s) Aluminum nitride (AlN) 163 a Polymer layers Polyurethane foam 18 b Backing metal Aluminum 6061-T6 (Al) 23 c Projectile Tungsten heavy alloy...larger (a factor of 3.8) than the most dense polyurethane foam of the available constitutive models. Default options for element failure were imposed in...AlN), a polycrystalline ceramic. The total thickness of the tile(s) is 38.1 mm in all cases. A thin polyurethane laminate separates neighboring tiles

  15. KSC-08pd1966

    NASA Image and Video Library

    2008-07-14

    CAPE CANAVERAL, Fla. – In the tile shop at NASA's Kennedy Space Center, a worker places a Boeing Replacement Insulation 18, or BRI-18, tile in the oven. The tile will be baked at 2,200 degrees Fahrenheit to cure the ceramic coating, part of the process to prepare the tiles for installation on space shuttles. BRI-18 is the strongest material used for thermal insulation on the orbiters and, when coated to produce toughened unipiece fibrous insulation, provides a tile with extremely high-impact resistance. It is replacing other tiles on areas of the vehicle where impact risk is high, such as the landing gear doors, the wing leading edge and the external tank doors. Photo credit: NASA/Jim Grossmann

  16. Substructure procedure for including tile flexibility in stress analysis of shuttle thermal protection system

    NASA Technical Reports Server (NTRS)

    Giles, G. L.

    1980-01-01

    A substructure procedure to include the flexibility of the tile in the stress analysis of the shuttle thermal protection system (TPS) is described. In this procedure, the TPS is divided into substructures of (1) the tile which is modeled by linear finite elements and (2) the SIP which is modeled as a nonlinear continuum. This procedure was applied for loading cases of uniform pressure, uniform moment, and an aerodynamic shock on various tile thicknesses. The ratios of through-the-thickness stresses in the SIP which were calculated using a flexible tile compared to using a rigid tile were found to be less than 1.05 for the cases considered.

  17. Fractal spectral triples on Kellendonk's C∗-algebra of a substitution tiling

    NASA Astrophysics Data System (ADS)

    Mampusti, Michael; Whittaker, Michael F.

    2017-02-01

    We introduce a new class of noncommutative spectral triples on Kellendonk's C∗-algebra associated with a nonperiodic substitution tiling. These spectral triples are constructed from fractal trees on tilings, which define a geodesic distance between any two tiles in the tiling. Since fractals typically have infinite Euclidean length, the geodesic distance is defined using Perron-Frobenius theory, and is self-similar with scaling factor given by the Perron-Frobenius eigenvalue. We show that each spectral triple is θ-summable, and respects the hierarchy of the substitution system. To elucidate our results, we construct a fractal tree on the Penrose tiling, and explicitly show how it gives rise to a collection of spectral triples.

  18. Biogenic twinned crystals exhibiting unique morphological symmetry

    NASA Astrophysics Data System (ADS)

    Hirsch, Anna; Gur, Dvir; Palmer, Ben; Addadi, Lia; Leiserowitz, Leslie; Kronik, Leeor

    Guanine crystals are widely used in nature as components of multilayer reflectors. Organisms control the size, morphology, and arrangement of these crystals, to obtain a variety of optical ''devices''. The reflection systems found in the lens of the scallop eye and in the copepod cuticle are unique in that the multilayered reflectors are tiled together to form a contiguous packed array. In the former, square crystals are tiled to form a reflecting mirror. In the latter, hexagonal crystals are closely packed to produce brilliant colors. Based on electron diffraction, morphology considerations, and density functional theory, these crystals were shown to possess similar monoclinic crystal symmetry, which we have previously identified as different from that of synthetic anhydrous guanine. However, the crystals are different in that multiple twinning about the {012} and the {011} crystallographic planes results in square and hexagonal morphology, respectively. This is a unique example where controlled twinning is used as a strategy to form a morphology with higher symmetry than that of the underlying crystal, allowing for tilling that facilitates optical functionality.

  19. Accounting for the risks of phosphorus losses through tile drains in a phosphorus index.

    PubMed

    Reid, D Keith; Ball, Bonnie; Zhang, T Q

    2012-01-01

    Tile drainage systems have been identified as a significant conduit for phosphorus (P) losses to surface water, but P indices do not currently account for this transport pathway in a meaningful way. Several P indices mention tile drains, but most account for either the reduction in surface runoff or the enhanced transport through tiles rather than both simultaneously. A summary of the current state of how tile drains are accounted for within P indices is provided, and the challenges in predicting the risk of P losses through tile drains that are relative to actual losses are discussed. A framework for a component P Index is described, along with a proposal to incorporate predictions of losses through tile drains as a component within this framework. Options for calibrating and testing this component are discussed. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

  20. Gene expression analysis of the biocontrol fungus Trichoderma harzianum in the presence of tomato plants, chitin, or glucose using a high-density oligonucleotide microarray.

    PubMed

    Samolski, Ilanit; de Luis, Alberto; Vizcaíno, Juan Antonio; Monte, Enrique; Suárez, M Belén

    2009-10-13

    It has recently been shown that the Trichoderma fungal species used for biocontrol of plant diseases are capable of interacting with plant roots directly, behaving as symbiotic microorganisms. With a view to providing further information at transcriptomic level about the early response of Trichoderma to a host plant, we developed a high-density oligonucleotide (HDO) microarray encompassing 14,081 Expressed Sequence Tag (EST)-based transcripts from eight Trichoderma spp. and 9,121 genome-derived transcripts of T. reesei, and we have used this microarray to examine the gene expression of T. harzianum either alone or in the presence of tomato plants, chitin, or glucose. Global microarray analysis revealed 1,617 probe sets showing differential expression in T. harzianum mycelia under at least one of the culture conditions tested as compared with one another. Hierarchical clustering and heat map representation showed that the expression patterns obtained in glucose medium clustered separately from the expression patterns observed in the presence of tomato plants and chitin. Annotations using the Blast2GO suite identified 85 of the 257 transcripts whose probe sets afforded up-regulated expression in response to tomato plants. Some of these transcripts were predicted to encode proteins related to Trichoderma-host (fungus or plant) associations, such as Sm1/Elp1 protein, proteases P6281 and PRA1, enchochitinase CHIT42, or QID74 protein, although previously uncharacterized genes were also identified, including those responsible for the possible biosynthesis of nitric oxide, xenobiotic detoxification, mycelium development, or those related to the formation of infection structures in plant tissues. The effectiveness of the Trichoderma HDO microarray to detect different gene responses under different growth conditions in the fungus T. harzianum strongly indicates that this tool should be useful for further assays that include different stages of plant colonization, as well as for expression studies in other Trichoderma spp. represented on it. Using this microarray, we have been able to define a number of genes probably involved in the transcriptional response of T. harzianum within the first hours of contact with tomato plant roots, which may provide new insights into the mechanisms and roles of this fungus in the Trichoderma-plant interaction.

  1. Gene expression analysis of the biocontrol fungus Trichoderma harzianum in the presence of tomato plants, chitin, or glucose using a high-density oligonucleotide microarray

    PubMed Central

    2009-01-01

    Background It has recently been shown that the Trichoderma fungal species used for biocontrol of plant diseases are capable of interacting with plant roots directly, behaving as symbiotic microorganisms. With a view to providing further information at transcriptomic level about the early response of Trichoderma to a host plant, we developed a high-density oligonucleotide (HDO) microarray encompassing 14,081 Expressed Sequence Tag (EST)-based transcripts from eight Trichoderma spp. and 9,121 genome-derived transcripts of T. reesei, and we have used this microarray to examine the gene expression of T. harzianum either alone or in the presence of tomato plants, chitin, or glucose. Results Global microarray analysis revealed 1,617 probe sets showing differential expression in T. harzianum mycelia under at least one of the culture conditions tested as compared with one another. Hierarchical clustering and heat map representation showed that the expression patterns obtained in glucose medium clustered separately from the expression patterns observed in the presence of tomato plants and chitin. Annotations using the Blast2GO suite identified 85 of the 257 transcripts whose probe sets afforded up-regulated expression in response to tomato plants. Some of these transcripts were predicted to encode proteins related to Trichoderma-host (fungus or plant) associations, such as Sm1/Elp1 protein, proteases P6281 and PRA1, enchochitinase CHIT42, or QID74 protein, although previously uncharacterized genes were also identified, including those responsible for the possible biosynthesis of nitric oxide, xenobiotic detoxification, mycelium development, or those related to the formation of infection structures in plant tissues. Conclusion The effectiveness of the Trichoderma HDO microarray to detect different gene responses under different growth conditions in the fungus T. harzianum strongly indicates that this tool should be useful for further assays that include different stages of plant colonization, as well as for expression studies in other Trichoderma spp. represented on it. Using this microarray, we have been able to define a number of genes probably involved in the transcriptional response of T. harzianum within the first hours of contact with tomato plant roots, which may provide new insights into the mechanisms and roles of this fungus in the Trichoderma-plant interaction. PMID:19825185

  2. Production Process for Strong, Light Ceramic Tiles

    NASA Technical Reports Server (NTRS)

    Holmquist, G. R.; Cordia, E. R.; Tomer, R. S.

    1985-01-01

    Proportions of ingredients and sintering time/temperature schedule changed. Production process for lightweight, high-strength ceramic insulating tiles for Space Shuttle more than just scaled-up version of laboratory process for making small tiles. Boron in aluminum borosilicate fibers allows fusion at points where fibers contact each other during sintering, thereby greatly strengthening tiles structure.

  3. Installation of Ceramic Tile: Residential Thin-Set Methods.

    ERIC Educational Resources Information Center

    Short, Sam

    This curriculum guide contains materials for use in teaching a course on residential thin-set methods of tile installation. Covered in the individual units are the following topics: the tile industry; basic math; tools; measurement; safety in tile setting; installation materials and guidelines for their use; floors; counter tops and backsplashes;…

  4. Comparison of performance of tile drainage routines in SWAT 2009 and 2012 in an extensively tile-drained watershed in Midwest

    USDA-ARS?s Scientific Manuscript database

    Subsurface tile drainage systems are widely used in agricultural watersheds in the Midwestern U.S. Tile drainage systems enable the Midwest area to become highly productive agricultural lands, but can also create environmental problems, for example nitrate-N contamination associated with drainage w...

  5. Flat Tile Armour Cooled by Hypervapotron Tube: a Possible Technology for ITER

    NASA Astrophysics Data System (ADS)

    Schlosser, J.; Escourbiac, F.; Merola, M.; Schedler, B.; Bayetti, P.; Missirlian, M.; Mitteau, R.; Robin-Vastra, I.

    Carbon fibre composite (CFC) flat tile armours for actively cooled plasma facing components (PFC’s) are an important challenge for controlled fusion machines. Flat tile concepts, water cooled by tubes, were studied, developed, tested and finally operated with success in Tore Supra. The components were designed for 10 MW/m2 and mock-ups were successfully fatigue tested at 15 MW/m2, 1000 cycles. For ITER, a tube-in-tile concept was developed and mock-ups sustained up to 25 MW/m2 for 1000 cycles without failure. Recently flat tile armoured mock-ups cooled by a hypervapotron tube successfully sustained a cascade failure test under a mean heat flux of 10 MW/m2 but with a doubling of the heat flux on some tiles to simulate missing tiles (500 cycles). This encouraging results lead to reconsider the limits for flat tile concept when cooled by hypervapotron (HV) tube. New tests are now scheduled to investigate these limits in regard to the ITER requirements. Experimental evidence of the concept could be gained in Tore Supra by installing a new limiter into the machine.

  6. Crystallization mosaic effect generation by superpixels

    NASA Astrophysics Data System (ADS)

    Xie, Yuqi; Bo, Pengbo; Yuan, Ye; Wang, Kuanquan

    2015-03-01

    Art effect generation from digital images using computational tools has been a hot research topic in recent years. We propose a new method for generating crystallization mosaic effects from color images. Two key problems in generating pleasant mosaic effect are studied: grouping pixels into mosaic tiles and arrangement of mosaic tiles adapting to image features. To give visually pleasant mosaic effect, we propose to create mosaic tiles by pixel clustering in feature space of color information, taking compactness of tiles into consideration as well. Moreover, we propose a method for processing feature boundaries in images which gives guidance for arranging mosaic tiles near image features. This method gives nearly uniform shape of mosaic tiles, adapting to feature lines in an esthetic way. The new approach considers both color distance and Euclidean distance of pixels, and thus is capable of giving mosaic tiles in a more pleasing manner. Some experiments are included to demonstrate the computational efficiency of the present method and its capability of generating visually pleasant mosaic tiles. Comparisons with existing approaches are also included to show the superiority of the new method.

  7. Technical note: comparing von Luschan skin color tiles and modern spectrophotometry for measuring human skin pigmentation.

    PubMed

    Swiatoniowski, Anna K; Quillen, Ellen E; Shriver, Mark D; Jablonski, Nina G

    2013-06-01

    Prior to the introduction of reflectance spectrophotometry into anthropological field research during the 1950s, human skin color was most commonly classified by visual skin color matching using the von Luschan tiles, a set of 36 standardized, opaque glass tiles arranged in a chromatic scale. Our goal was to establish a conversion formula between the tile-based color matching method and modern reflectance spectrophotometry to make historical and contemporary data comparable. Skin pigmentation measurements were taken on the forehead, inner upper arms, and backs of the hands using both the tiles and a spectrophotometer on 246 participants showing a broad range of skin pigmentation. From these data, a second-order polynomial conversion formula was derived by jackknife analysis to estimate melanin index (M-index) based on tile values. This conversion formula provides a means for comparing modern data to von Luschan tile measurements recorded in historical reports. This is particularly important for populations now extinct, extirpated, or admixed for which tile-based measures of skin pigmentation are the only data available. Copyright © 2013 Wiley Periodicals, Inc.

  8. Revitalizing the Space Shuttle's Thermal Protection System with Reverse Engineering and 3D Vision Technology

    NASA Technical Reports Server (NTRS)

    Wilson, Brad; Galatzer, Yishai

    2008-01-01

    The Space Shuttle is protected by a Thermal Protection System (TPS) made of tens of thousands of individually shaped heat protection tile. With every flight, tiles are damaged on take-off and return to earth. After each mission, the heat tiles must be fixed or replaced depending on the level of damage. As part of the return to flight mission, the TPS requirements are more stringent, leading to a significant increase in heat tile replacements. The replacement operation requires scanning tile cavities, and in some cases the actual tiles. The 3D scan data is used to reverse engineer each tile into a precise CAD model, which in turn, is exported to a CAM system for the manufacture of the heat protection tile. Scanning is performed while other activities are going on in the shuttle processing facility. Many technicians work simultaneously on the space shuttle structure, which results in structural movements and vibrations. This paper will cover a portable, ultra-fast data acquisition approach used to scan surfaces in this unstable environment.

  9. Preferential flow estimates to an agricultural tile drain with implications for glyphosate transport

    USGS Publications Warehouse

    Stone, W.W.; Wilson, J.T.

    2006-01-01

    Agricultural subsurface drains, commonly referred to as tile drains, are potentially significant pathways for the movement of fertilizers and pesticides to streams and ditches in much of the Midwest. Preferential flow in the unsaturated zone provides a route for water and solutes to bypass the soil matrix and reach tile drains faster than predicted by traditional displacement theory. This paper uses chloride concentrations to estimate preferential flow contributions to a tile drain during two storms in May 2004. Chloride, a conservative anion, was selected as the tracer because of differences in chloride concentrations between the two sources of water to the tile drain, preferential and matrix flow. A strong correlation between specific conductance and chloride concentration provided a mechanism to estimate chloride concentrations in the tile drain throughout the storm hydrographs. A simple mixing analysis was used to identify the preferential flow component of the storm hydrograph. During two storms, preferential flow contributed 11 and 51% of total storm tile drain flow; the peak contributions, 40 and 81%, coincided with the peak tile drain flow. Positive relations between glyphosate [N-(phosphonomethyl)glycine] concentrations and preferential flow for the two storms suggest that preferential flow is an important transport pathway to the tile drain. ?? ASA, CSSA, SSSA.

  10. Kinetics of DNA tile dimerization.

    PubMed

    Jiang, Shuoxing; Yan, Hao; Liu, Yan

    2014-06-24

    Investigating how individual molecular components interact with one another within DNA nanoarchitectures, both in terms of their spatial and temporal interactions, is fundamentally important for a better understanding of their physical behaviors. This will provide researchers with valuable insight for designing more complex higher-order structures that can be assembled more efficiently. In this report, we examined several spatial factors that affect the kinetics of bivalent, double-helical (DH) tile dimerization, including the orientation and number of sticky ends (SEs), the flexibility of the double helical domains, and the size of the tiles. The rate constants we obtained confirm our hypothesis that increased nucleation opportunities and well-aligned SEs accelerate tile-tile dimerization. Increased flexibility in the tiles causes slower dimerization rates, an effect that can be reversed by introducing restrictions to the tile flexibility. The higher dimerization rates of more rigid tiles results from the opposing effects of higher activation energies and higher pre-exponential factors from the Arrhenius equation, where the pre-exponential factor dominates. We believe that the results presented here will assist in improved implementation of DNA tile based algorithmic self-assembly, DNA based molecular robotics, and other specific nucleic acid systems, and will provide guidance to design and assembly processes to improve overall yield and efficiency.

  11. Tile Drainage Management Influences on Surface-Water and Groundwater Quality following Liquid Manure Application.

    PubMed

    Frey, Steven K; Topp, Ed; Ball, Bonnie R; Edwards, Mark; Gottschall, Natalie; Sunohara, Mark; Zoski, Erin; Lapen, David R

    2013-01-01

    This study investigated the potential for controlled tile drainage (CD) to reduce bacteria and nutrient loading to surface water and groundwater from fall-season liquid manure application (LMA) on four macroporous clay loam plots, of which two had CD and two had free-draining (FD) tiles. Rhodamine WT (RWT) was mixed into the manure and monitored in the tile water and groundwater following LMA. Tile water and groundwater quality were influenced by drainage management. Following LMA on the FD plots, RWT, nutrients, and bacteria moved rapidly via tiles to surface water; at the CD plots, tiles did not flow until the first post-LMA rainfall, so the immediate risk of LMA-induced contamination of surface water was abated. During the 36-d monitoring period, flow-weighted average specific conductance, redox potential, and turbidity, as well as total Kjeldahl N (TKN), total P (TP), NH-N, reactive P, and RWT concentrations, were higher in the CD tile effluent; however, because of lower tile discharge from the CD plots, there was no significant ( ≤ 0.05) difference in surface water nutrient and RWT loading between the CD and FD plots when all tiles were flowing. The TKN, TP, and RWT concentrations in groundwater also tended to be higher at the CD plots. Bacteria behaved differently than nutrients and RWT, with no significant difference in total coliform, , fecal coliform, fecal streptococcus, and concentrations between the CD and FD tile effluent; however, for all but , hourly loading was higher from the FD plots. Results indicate that CD has potential for mitigating bacteria movement to surface water. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

  12. Self assembly of rectangular shapes on concentration programming and probabilistic tile assembly models.

    PubMed

    Kundeti, Vamsi; Rajasekaran, Sanguthevar

    2012-06-01

    Efficient tile sets for self assembling rectilinear shapes is of critical importance in algorithmic self assembly. A lower bound on the tile complexity of any deterministic self assembly system for an n × n square is [Formula: see text] (inferred from the Kolmogrov complexity). Deterministic self assembly systems with an optimal tile complexity have been designed for squares and related shapes in the past. However designing [Formula: see text] unique tiles specific to a shape is still an intensive task in the laboratory. On the other hand copies of a tile can be made rapidly using PCR (polymerase chain reaction) experiments. This led to the study of self assembly on tile concentration programming models. We present two major results in this paper on the concentration programming model. First we show how to self assemble rectangles with a fixed aspect ratio ( α:β ), with high probability, using Θ( α + β ) tiles. This result is much stronger than the existing results by Kao et al. (Randomized self-assembly for approximate shapes, LNCS, vol 5125. Springer, Heidelberg, 2008) and Doty (Randomized self-assembly for exact shapes. In: proceedings of the 50th annual IEEE symposium on foundations of computer science (FOCS), IEEE, Atlanta. pp 85-94, 2009)-which can only self assembly squares and rely on tiles which perform binary arithmetic. On the other hand, our result is based on a technique called staircase sampling . This technique eliminates the need for sub-tiles which perform binary arithmetic, reduces the constant in the asymptotic bound, and eliminates the need for approximate frames (Kao et al. Randomized self-assembly for approximate shapes, LNCS, vol 5125. Springer, Heidelberg, 2008). Our second result applies staircase sampling on the equimolar concentration programming model (The tile complexity of linear assemblies. In: proceedings of the 36th international colloquium automata, languages and programming: Part I on ICALP '09, Springer-Verlag, pp 235-253, 2009), to self assemble rectangles (of fixed aspect ratio) with high probability. The tile complexity of our algorithm is Θ(log( n )) and is optimal on the probabilistic tile assembly model (PTAM)- n being an upper bound on the dimensions of a rectangle.

  13. The TeleEngineering Toolkit Software Reference Manual

    DTIC Science & Technology

    2007-08-01

    arrangement of windows. ................................................................. 74 Figure 6.26. Tile arrangement of windows...Level 1, and Commercial Satellite Imagery (CSIL). The Toolkit also supports USGS Digital Orthophoto Quadrangle, scanned georectified maps, and various...in a cascading manner as shown in Figure 6.25. Tile The Tile tool in the Window menu will arrange the windows in a tiled manner as shown in

  14. Handmade Tile Mosaics

    ERIC Educational Resources Information Center

    Keeler, Rusty

    2007-01-01

    Just like the classroom, children's outdoor environments should be filled with artistic creations that add sparkle and imagination to the space. One of the author's favorite ways to add art to the outdoors is by installing a mosaic mural of child-made tiles. The process of making the tiles is fun for all; each tile is a charming work of art in…

  15. 21. TILES OF THE NEW WORLD PANEL, NORTH WALL OF ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    21. TILES OF THE NEW WORLD PANEL, NORTH WALL OF THE INDIAN HOUSE. THE RELIEF BROCADE TILES ILLUSTRATE SCENES OF NATIVE AMERICAN HISTORY AND CULTURE, AND THE EARLY EUROPEAN EXPLORATION OF THE NEW WORLD. - Moravian Pottery & Tile Works, Southwest side of State Route 313 (Swamp Road), Northwest of East Court Street, Doylestown, Bucks County, PA

  16. At-TAX: a whole genome tiling array resource for developmental expression analysis and transcript identification in Arabidopsis thaliana

    PubMed Central

    Laubinger, Sascha; Zeller, Georg; Henz, Stefan R; Sachsenberg, Timo; Widmer, Christian K; Naouar, Naïra; Vuylsteke, Marnik; Schölkopf, Bernhard; Rätsch, Gunnar; Weigel, Detlef

    2008-01-01

    Gene expression maps for model organisms, including Arabidopsis thaliana, have typically been created using gene-centric expression arrays. Here, we describe a comprehensive expression atlas, Arabidopsis thaliana Tiling Array Express (At-TAX), which is based on whole-genome tiling arrays. We demonstrate that tiling arrays are accurate tools for gene expression analysis and identified more than 1,000 unannotated transcribed regions. Visualizations of gene expression estimates, transcribed regions, and tiling probe measurements are accessible online at the At-TAX homepage. PMID:18613972

  17. Tethers as Debris: Simulating Impacts of Tether Fragments on Shuttle Tiles

    NASA Technical Reports Server (NTRS)

    Evans, Steven W.

    2004-01-01

    The SPHC hydrodynamic code was used to simulate impacts of Kevlar and aluminum projectiles on a model of the LI-900 type insulating tiles used on Space Shuffle Orbiters The intent was to examine likely damage that such tiles might experience if impacted by orbital debris consisting of tether fragments. Projectile speeds ranged from 300 meters per second to 10 kilometers per second. Damage is characterized by penetration depth, tile surface-hole diameter, tile body-cavity diameter, coating fracture diameter, tether and cavity wall material phases, and deformation of the aluminum backwall.

  18. Multilayer Impregnated Fibrous Thermal Insulation Tiles

    NASA Technical Reports Server (NTRS)

    Tran, Huy K.; Rasky, Daniel J.; Szalai, Christine e.; Hsu, Ming-ta; Carroll, Joseph A.

    2007-01-01

    The term "secondary polymer layered impregnated tile" ("SPLIT") denotes a type of ablative composite-material thermal- insulation tiles having engineered, spatially non-uniform compositions. The term "secondary" refers to the fact that each tile contains at least two polymer layers wherein endothermic reactions absorb considerable amounts of heat, thereby helping to prevent overheating of an underlying structure. These tiles were invented to afford lighter-weight alternatives to the reusable thermal-insulation materials heretofore variously used or considered for use in protecting the space shuttles and other spacecraft from intense atmospheric-entry heating.

  19. KSC-08pd1967

    NASA Image and Video Library

    2008-07-14

    CAPE CANAVERAL, Fla. – In the tile shop at NASA's Kennedy Space Center, a worker reaches for the door to close the oven with the Boeing Replacement Insulation 18, or BRI-18, tile inside. The tile will be baked at 2,200 degrees Fahrenheit to cure the ceramic coating, part of the process to prepare the tiles for installation on space shuttles. BRI-18 is the strongest material used for thermal insulation on the orbiters and, when coated to produce toughened unipiece fibrous insulation, provides a tile with extremely high-impact resistance. It is replacing other tiles on areas of the vehicle where impact risk is high, such as the landing gear doors, the wing leading edge and the external tank doors. Photo credit: NASA/Jim Grossmann

  20. KSC-08pd1965

    NASA Image and Video Library

    2008-07-14

    CAPE CANAVERAL, Fla. – In the tile shop at NASA's Kennedy Space Center, a worker is ready to place a Boeing Replacement Insulation 18, or BRI-18, tile in the oven. The tile will be baked at 2,200 degrees Fahrenheit to cure the ceramic coating, part of the process to prepare the tiles for installation on space shuttles. BRI-18 is the strongest material used for thermal insulation on the orbiters and, when coated to produce toughened unipiece fibrous insulation, provides a tile with extremely high-impact resistance. It is replacing other tiles on areas of the vehicle where impact risk is high, such as the landing gear doors, the wing leading edge and the external tank doors. Photo credit: NASA/Jim Grossmann

  1. Ion beam sputter target and method of manufacture

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Higdon, Clifton; Elmoursi, Alaa A.; Goldsmith, Jason

    A target for use in an ion beam sputtering apparatus made of at least two target tiles where at least two of the target tiles are made of different chemical compositions and are mounted on a main tile and geometrically arranged on the main tile to yield a desired chemical composition on a sputtered substrate. In an alternate embodiment, the tiles are of varied thickness according to the desired chemical properties of the sputtered film. In yet another alternate embodiment, the target is comprised of plugs pressed in a green state which are disposed in cavities formed in a mainmore » tile also formed in a green state and the assembly can then be compacted and then sintered.« less

  2. CFD-Predicted Tile Heating Bump Factors Due to Tile Overlay Repairs

    NASA Technical Reports Server (NTRS)

    Lessard, Victor R.

    2006-01-01

    A Computational Fluid Dynamics investigation of the Orbiter's Tile Overlay Repair (TOR) is performed to assess the aeroheating Damage Assessment Team's (DAT) existing heating correlation method for protuberance interference heating on the surrounding thermal protection system. Aerothermodynamic heating analyses are performed for TORs at the design reference damage locations body points 1800 and 1075 for a Mach 17.9 and a=39deg STS-107 flight trajectory point with laminar flow. Six different cases are considered. The computed peak heating bump factor on the surrounding tiles are below the DAT's heating bump factor values for smooth tile cases. However, for the uneven tiles cases the peak interference heating is shown to be considerably higher than the existing correlation prediction.

  3. Development and application of a 6.5 million feature Affymetrix Genechip® for massively parallel discovery of single position polymorphisms in lettuce (Lactuca spp.)

    PubMed Central

    2012-01-01

    Background High-resolution genetic maps are needed in many crops to help characterize the genetic diversity that determines agriculturally important traits. Hybridization to microarrays to detect single feature polymorphisms is a powerful technique for marker discovery and genotyping because of its highly parallel nature. However, microarrays designed for gene expression analysis rarely provide sufficient gene coverage for optimal detection of nucleotide polymorphisms, which limits utility in species with low rates of polymorphism such as lettuce (Lactuca sativa). Results We developed a 6.5 million feature Affymetrix GeneChip® for efficient polymorphism discovery and genotyping, as well as for analysis of gene expression in lettuce. Probes on the microarray were designed from 26,809 unigenes from cultivated lettuce and an additional 8,819 unigenes from four related species (L. serriola, L. saligna, L. virosa and L. perennis). Where possible, probes were tiled with a 2 bp stagger, alternating on each DNA strand; providing an average of 187 probes covering approximately 600 bp for each of over 35,000 unigenes; resulting in up to 13 fold redundancy in coverage per nucleotide. We developed protocols for hybridization of genomic DNA to the GeneChip® and refined custom algorithms that utilized coverage from multiple, high quality probes to detect single position polymorphisms in 2 bp sliding windows across each unigene. This allowed us to detect greater than 18,000 polymorphisms between the parental lines of our core mapping population, as well as numerous polymorphisms between cultivated lettuce and wild species in the lettuce genepool. Using marker data from our diversity panel comprised of 52 accessions from the five species listed above, we were able to separate accessions by species using both phylogenetic and principal component analyses. Additionally, we estimated the diversity between different types of cultivated lettuce and distinguished morphological types. Conclusion By hybridizing genomic DNA to a custom oligonucleotide array designed for maximum gene coverage, we were able to identify polymorphisms using two approaches for pair-wise comparisons, as well as a highly parallel method that compared all 52 genotypes simultaneously. PMID:22583801

  4. Development and application of a 6.5 million feature Affymetrix Genechip® for massively parallel discovery of single position polymorphisms in lettuce (Lactuca spp.).

    PubMed

    Stoffel, Kevin; van Leeuwen, Hans; Kozik, Alexander; Caldwell, David; Ashrafi, Hamid; Cui, Xinping; Tan, Xiaoping; Hill, Theresa; Reyes-Chin-Wo, Sebastian; Truco, Maria-Jose; Michelmore, Richard W; Van Deynze, Allen

    2012-05-14

    High-resolution genetic maps are needed in many crops to help characterize the genetic diversity that determines agriculturally important traits. Hybridization to microarrays to detect single feature polymorphisms is a powerful technique for marker discovery and genotyping because of its highly parallel nature. However, microarrays designed for gene expression analysis rarely provide sufficient gene coverage for optimal detection of nucleotide polymorphisms, which limits utility in species with low rates of polymorphism such as lettuce (Lactuca sativa). We developed a 6.5 million feature Affymetrix GeneChip® for efficient polymorphism discovery and genotyping, as well as for analysis of gene expression in lettuce. Probes on the microarray were designed from 26,809 unigenes from cultivated lettuce and an additional 8,819 unigenes from four related species (L. serriola, L. saligna, L. virosa and L. perennis). Where possible, probes were tiled with a 2 bp stagger, alternating on each DNA strand; providing an average of 187 probes covering approximately 600 bp for each of over 35,000 unigenes; resulting in up to 13 fold redundancy in coverage per nucleotide. We developed protocols for hybridization of genomic DNA to the GeneChip® and refined custom algorithms that utilized coverage from multiple, high quality probes to detect single position polymorphisms in 2 bp sliding windows across each unigene. This allowed us to detect greater than 18,000 polymorphisms between the parental lines of our core mapping population, as well as numerous polymorphisms between cultivated lettuce and wild species in the lettuce genepool. Using marker data from our diversity panel comprised of 52 accessions from the five species listed above, we were able to separate accessions by species using both phylogenetic and principal component analyses. Additionally, we estimated the diversity between different types of cultivated lettuce and distinguished morphological types. By hybridizing genomic DNA to a custom oligonucleotide array designed for maximum gene coverage, we were able to identify polymorphisms using two approaches for pair-wise comparisons, as well as a highly parallel method that compared all 52 genotypes simultaneously.

  5. Rocky Mountain Arsenal, Sections 26 and 25 Contamination Survey. Phase 1

    DTIC Science & Technology

    1987-12-01

    mapping specifications for scale, overlap, density, and image quality. Utilizing the aerial photography and ground control described above, orthophoto ...base maps with superimposed contours will be prepared. £ 3-2 RMA06-D.1/TPGEO 1.3 11/20/87 Orthophoto negatives will be prepared directly at the final...cdial lnvestigation/Feasibiliy Studv (RI/FS) at tile Rocky Mountain Arsenal. Tasks 4 and 6 were prepared by ’Environmental Science and Engineering (ESE

  6. Fabrication of high quality cDNA microarray using a small amount of cDNA.

    PubMed

    Park, Chan Hee; Jeong, Ha Jin; Jung, Jae Jun; Lee, Gui Yeon; Kim, Sang-Chul; Kim, Tae Soo; Yang, Sang Hwa; Chung, Hyun Cheol; Rha, Sun Young

    2004-05-01

    DNA microarray technology has become an essential part of biological research. It enables the genome-scale analysis of gene expression in various types of model systems. Manufacturing high quality cDNA microarrays of microdeposition type depends on some key factors including a printing device, spotting pins, glass slides, spotting solution, and humidity during spotting. UsingEthe Microgrid II TAS model printing device, this study defined the optimal conditions for producing high density, high quality cDNA microarrays with the least amount of cDNA product. It was observed that aminosilane-modified slides were superior to other types of surface modified-slides. A humidity of 30+/-3% in a closed environment and the overnight drying of the spotted slides gave the best conditions for arraying. In addition, the cDNA dissolved in 30% DMSO gave the optimal conditions for spotting compared to the 1X ArrayIt, 3X SSC and 50% DMSO. Lastly, cDNA in the concentration range of 100-300 ng/ micro l was determined to be best for arraying and post-processing. Currently, the printing system in this study yields reproducible 9000 spots with a spot size 150 mm diameter, and a 200 nm spot spacing.

  7. A New Distribution Family for Microarray Data †

    PubMed Central

    Kelmansky, Diana Mabel; Ricci, Lila

    2017-01-01

    The traditional approach with microarray data has been to apply transformations that approximately normalize them, with the drawback of losing the original scale. The alternative standpoint taken here is to search for models that fit the data, characterized by the presence of negative values, preserving their scale; one advantage of this strategy is that it facilitates a direct interpretation of the results. A new family of distributions named gpower-normal indexed by p∈R is introduced and it is proven that these variables become normal or truncated normal when a suitable gpower transformation is applied. Expressions are given for moments and quantiles, in terms of the truncated normal density. This new family can be used to model asymmetric data that include non-positive values, as required for microarray analysis. Moreover, it has been proven that the gpower-normal family is a special case of pseudo-dispersion models, inheriting all the good properties of these models, such as asymptotic normality for small variances. A combined maximum likelihood method is proposed to estimate the model parameters, and it is applied to microarray and contamination data. R codes are available from the authors upon request. PMID:28208652

  8. High density DNA microarrays: algorithms and biomedical applications.

    PubMed

    Liu, Wei-Min

    2004-08-01

    DNA microarrays are devices capable of detecting the identity and abundance of numerous DNA or RNA segments in samples. They are used for analyzing gene expressions, identifying genetic markers and detecting mutations on a genomic scale. The fundamental chemical mechanism of DNA microarrays is the hybridization between probes and targets due to the hydrogen bonds of nucleotide base pairing. Since the cross hybridization is inevitable, and probes or targets may form undesirable secondary or tertiary structures, the microarray data contain noise and depend on experimental conditions. It is crucial to apply proper statistical algorithms to obtain useful signals from noisy data. After we obtained the signals of a large amount of probes, we need to derive the biomedical information such as the existence of a transcript in a cell, the difference of expression levels of a gene in multiple samples, and the type of a genetic marker. Furthermore, after the expression levels of thousands of genes or the genotypes of thousands of single nucleotide polymorphisms are determined, it is usually important to find a small number of genes or markers that are related to a disease, individual reactions to drugs, or other phenotypes. All these applications need careful data analyses and reliable algorithms.

  9. A New Distribution Family for Microarray Data.

    PubMed

    Kelmansky, Diana Mabel; Ricci, Lila

    2017-02-10

    The traditional approach with microarray data has been to apply transformations that approximately normalize them, with the drawback of losing the original scale. The alternative stand point taken here is to search for models that fit the data, characterized by the presence of negative values, preserving their scale; one advantage of this strategy is that it facilitates a direct interpretation of the results. A new family of distributions named gpower-normal indexed by p∈R is introduced and it is proven that these variables become normal or truncated normal when a suitable gpower transformation is applied. Expressions are given for moments and quantiles, in terms of the truncated normal density. This new family can be used to model asymmetric data that include non-positive values, as required for microarray analysis. Moreover, it has been proven that the gpower-normal family is a special case of pseudo-dispersion models, inheriting all the good properties of these models, such as asymptotic normality for small variances. A combined maximum likelihood method is proposed to estimate the model parameters, and it is applied to microarray and contamination data. Rcodes are available from the authors upon request.

  10. Tungsten erosion by unipolar arcing in DIII-D

    NASA Astrophysics Data System (ADS)

    Bykov, I.; Chrobak, C. P.; Abrams, T.; Rudakov, D. L.; Unterberg, E. A.; Wampler, W. R.; Hollmann, E. M.; Moyer, R. A.; Boedo, J. A.; Stahl, B.; Hinson, E. T.; Yu, J. H.; Lasnier, C. J.; Makowski, M.; McLean, A. G.

    2017-12-01

    Unipolar arcing was an important mechanism of metal surface erosion during the recently conducted Metal Rings Campaign in DIII-D when two toroidally continuous tile rings with 5 cm wide W-coated TZM inserts were installed in graphite tiles in the lower divertor, one on the floor and one on the shelf. Most of the arc damage occurred on the shelf ring. The total amount of W removed by arcing from the affected ˜4% of the shelf ring area was estimated ˜0.8 × 1021 at., about half of the total amount of W eroded and redeposited outside the inserts (1.8 ± 0.9)×1021 at. The rings were exposed for a total of ˜480 discharges, an equivalent of plasma time on W surfaces (with {{I}}{{p}}> 0.5 MA) ˜103 s. Arcing was monitored in situ with WI (400.9 nm) filtered camera and photomultipliers and showed that: (i) arcing only occurred during ELMs and disruptions, (ii) arcing rate was much lower on the floor than on the shelf ring, and (iii) arcing had a low cut off power flux density about 2 MW m-2. About half of arc tracks had large {10}\\circ pitch angle and probably were produced during disruptions. Such tracks were only found on the shelf. Moderate toroidal variation of the arc track density and W erosion with nearly n = 1 pattern has been measured.

  11. Living-Cell Microarrays

    PubMed Central

    Yarmush, Martin L.; King, Kevin R.

    2011-01-01

    Living cells are remarkably complex. To unravel this complexity, living-cell assays have been developed that allow delivery of experimental stimuli and measurement of the resulting cellular responses. High-throughput adaptations of these assays, known as living-cell microarrays, which are based on microtiter plates, high-density spotting, microfabrication, and microfluidics technologies, are being developed for two general applications: (a) to screen large-scale chemical and genomic libraries and (b) to systematically investigate the local cellular microenvironment. These emerging experimental platforms offer exciting opportunities to rapidly identify genetic determinants of disease, to discover modulators of cellular function, and to probe the complex and dynamic relationships between cells and their local environment. PMID:19413510

  12. High-Density 16S Microarray and Clone Library-Based Microbial Community Composition of the Phoenix Spacecraft Assembly Clean Room

    NASA Astrophysics Data System (ADS)

    Vaishampayan, Parag; Osman, Shariff; Andersen, Gary; Venkateswaran, Kasthuri

    2010-06-01

    The bacterial diversity and comparative community structure of a clean room used for assembling the Phoenix spacecraft was characterized throughout the spacecraft assembly process by using 16S rRNA gene cloning/sequencing and DNA microarray (PhyloChip) technologies. Samples were collected from several locations of the clean room at three time points: before Phoenix's arrival (PHX-B), during hardware assembly (PHX-D), and after the spacecraft was removed for launch (PHX-A). Bacterial diversity comprised of all major bacterial phyla of PHX-B was found to be statistically different from PHX-D and PHX-A samples. Due to stringent cleaning and decontamination protocols during assembly, PHX-D bacterial diversity was dramatically reduced when compared to PHX-B and PHX-A samples. Comparative community analysis based on PhyloChip results revealed similar overall trends as were seen in clone libraries, but the high-density phylogenetic microarray detected larger diversity in all sampling events. The decrease in community complexity in PHX-D compared to PHX-B, and the subsequent recurrence of these organisms in PHX-A, speaks to the effectiveness of NASA cleaning protocols. However, the persistence of a subset of bacterial signatures throughout all spacecraft assembly phases underscores the need for continued refinement of sterilization technologies and the implementation of safeguards that monitor and inventory microbial contaminants.

  13. High-density 16S microarray and clone library-based microbial community composition of the Phoenix spacecraft assembly clean room.

    PubMed

    Vaishampayan, Parag; Osman, Shariff; Andersen, Gary; Venkateswaran, Kasthuri

    2010-06-01

    The bacterial diversity and comparative community structure of a clean room used for assembling the Phoenix spacecraft was characterized throughout the spacecraft assembly process by using 16S rRNA gene cloning/sequencing and DNA microarray (PhyloChip) technologies. Samples were collected from several locations of the clean room at three time points: before Phoenix's arrival (PHX-B), during hardware assembly (PHX-D), and after the spacecraft was removed for launch (PHX-A). Bacterial diversity comprised of all major bacterial phyla of PHX-B was found to be statistically different from PHX-D and PHX-A samples. Due to stringent cleaning and decontamination protocols during assembly, PHX-D bacterial diversity was dramatically reduced when compared to PHX-B and PHX-A samples. Comparative community analysis based on PhyloChip results revealed similar overall trends as were seen in clone libraries, but the high-density phylogenetic microarray detected larger diversity in all sampling events. The decrease in community complexity in PHX-D compared to PHX-B, and the subsequent recurrence of these organisms in PHX-A, speaks to the effectiveness of NASA cleaning protocols. However, the persistence of a subset of bacterial signatures throughout all spacecraft assembly phases underscores the need for continued refinement of sterilization technologies and the implementation of safeguards that monitor and inventory microbial contaminants.

  14. Influence of sampling window size and orientation on parafoveal cone packing density

    PubMed Central

    Lombardo, Marco; Serrao, Sebastiano; Ducoli, Pietro; Lombardo, Giuseppe

    2013-01-01

    We assessed the agreement between sampling windows of different size and orientation on packing density estimates in images of the parafoveal cone mosaic acquired using a flood-illumination adaptive optics retinal camera. Horizontal and vertical oriented sampling windows of different size (320x160 µm, 160x80 µm and 80x40 µm) were selected in two retinal locations along the horizontal meridian in one eye of ten subjects. At each location, cone density tended to decline with decreasing sampling area. Although the differences in cone density estimates were not statistically significant, Bland-Altman plots showed that the agreement between cone density estimated within the different sampling window conditions was moderate. The percentage of the preferred packing arrangements of cones by Voronoi tiles was slightly affected by window size and orientation. The results illustrated the high importance of specifying the size and orientation of the sampling window used to derive cone metric estimates to facilitate comparison of different studies. PMID:24009995

  15. Highly Symmetric and Congruently Tiled Meshes for Shells and Domes

    PubMed Central

    Rasheed, Muhibur; Bajaj, Chandrajit

    2016-01-01

    We describe the generation of all possible shell and dome shapes that can be uniquely meshed (tiled) using a single type of mesh face (tile), and following a single meshing (tiling) rule that governs the mesh (tile) arrangement with maximal vertex, edge and face symmetries. Such tiling arrangements or congruently tiled meshed shapes, are frequently found in chemical forms (fullerenes or Bucky balls, crystals, quasi-crystals, virus nano shells or capsids), and synthetic shapes (cages, sports domes, modern architectural facades). Congruently tiled meshes are both aesthetic and complete, as they support maximal mesh symmetries with minimal complexity and possess simple generation rules. Here, we generate congruent tilings and meshed shape layouts that satisfy these optimality conditions. Further, the congruent meshes are uniquely mappable to an almost regular 3D polyhedron (or its dual polyhedron) and which exhibits face-transitive (and edge-transitive) congruency with at most two types of vertices (each type transitive to the other). The family of all such congruently meshed polyhedra create a new class of meshed shapes, beyond the well-studied regular, semi-regular and quasi-regular classes, and their duals (platonic, Catalan and Johnson). While our new mesh class is infinite, we prove that there exists a unique mesh parametrization, where each member of the class can be represented by two integer lattice variables, and moreover efficiently constructable. PMID:27563368

  16. Mashup Scheme Design of Map Tiles Using Lightweight Open Source Webgis Platform

    NASA Astrophysics Data System (ADS)

    Hu, T.; Fan, J.; He, H.; Qin, L.; Li, G.

    2018-04-01

    To address the difficulty involved when using existing commercial Geographic Information System platforms to integrate multi-source image data fusion, this research proposes the loading of multi-source local tile data based on CesiumJS and examines the tile data organization mechanisms and spatial reference differences of the CesiumJS platform, as well as various tile data sources, such as Google maps, Map World, and Bing maps. Two types of tile data loading schemes have been designed for the mashup of tiles, the single data source loading scheme and the multi-data source loading scheme. The multi-sources of digital map tiles used in this paper cover two different but mainstream spatial references, the WGS84 coordinate system and the Web Mercator coordinate system. According to the experimental results, the single data source loading scheme and the multi-data source loading scheme with the same spatial coordinate system showed favorable visualization effects; however, the multi-data source loading scheme was prone to lead to tile image deformation when loading multi-source tile data with different spatial references. The resulting method provides a low cost and highly flexible solution for small and medium-scale GIS programs and has a certain potential for practical application values. The problem of deformation during the transition of different spatial references is an important topic for further research.

  17. 29 CFR 570.64 - Occupations involved in the manufacture of brick, tile, and kindred products (Order 13).

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 29 Labor 3 2011-07-01 2011-07-01 false Occupations involved in the manufacture of brick, tile, and... Detrimental to Their Health or Well-Being § 570.64 Occupations involved in the manufacture of brick, tile, and... term clay construction products shall mean the following clay products: Brick, hollow structural tile...

  18. 29 CFR 570.64 - Occupations involved in the manufacture of brick, tile, and kindred products (Order 13).

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 29 Labor 3 2013-07-01 2013-07-01 false Occupations involved in the manufacture of brick, tile, and... Detrimental to Their Health or Well-Being § 570.64 Occupations involved in the manufacture of brick, tile, and... term clay construction products shall mean the following clay products: Brick, hollow structural tile...

  19. 29 CFR 570.64 - Occupations involved in the manufacture of brick, tile, and kindred products (Order 13).

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 29 Labor 3 2012-07-01 2012-07-01 false Occupations involved in the manufacture of brick, tile, and... Detrimental to Their Health or Well-Being § 570.64 Occupations involved in the manufacture of brick, tile, and... term clay construction products shall mean the following clay products: Brick, hollow structural tile...

  20. 90. TILES OF THE NEW WORLD PANEL, NORTH WALL OF ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    90. TILES OF THE NEW WORLD PANEL, NORTH WALL OF THE INDIAN HOUSE. THE RELIEF BROCADE TILES ILLUSTRATE SCENES OF NATIVE AMERICAN HISTORY AND CULTURE, AND THE EARLY EUROPEAN EXPLORATION OF THE NEW WORLD. SAME VIEW AS PA-107-21. - Moravian Pottery & Tile Works, Southwest side of State Route 313 (Swamp Road), Northwest of East Court Street, Doylestown, Bucks County, PA

  1. 29 CFR 570.64 - Occupations involved in the manufacture of brick, tile, and kindred products (Order 13).

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 29 Labor 3 2014-07-01 2014-07-01 false Occupations involved in the manufacture of brick, tile, and... Detrimental to Their Health or Well-Being § 570.64 Occupations involved in the manufacture of brick, tile, and... term clay construction products shall mean the following clay products: Brick, hollow structural tile...

  2. 77 FR 15369 - Mobility Fund Phase I Auction GIS Data of Potentially Eligible Census Blocks

    Federal Register 2010, 2011, 2012, 2013, 2014

    2012-03-15

    ....fcc.gov/auctions/901/ , are the following: Downloadable shapefile Web mapping service MapBox map tiles... GIS software allows you to add this service as a layer to your session or project. 6. MapBox map tiles are cached map tiles of the data. With this open source software approach, these image tiles can be...

  3. 29 CFR 570.64 - Occupations involved in the manufacture of brick, tile, and kindred products (Order 13).

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 29 Labor 3 2010-07-01 2010-07-01 false Occupations involved in the manufacture of brick, tile, and... Detrimental to Their Health or Well-Being § 570.64 Occupations involved in the manufacture of brick, tile, and... term clay construction products shall mean the following clay products: Brick, hollow structural tile...

  4. Filler bar heating due to stepped tiles in the shuttle orbiter thermal protection system

    NASA Technical Reports Server (NTRS)

    Petley, D. H.; Smith, D. M.; Edwards, C. L. W.; Patten, A. B.; Hamilton, H. H., II

    1983-01-01

    An analytical study was performed to investigate the excessive heating in the tile to tile gaps of the Shuttle Orbiter Thermal Protection System due to stepped tiles. The excessive heating was evidence by visible discoloration and charring of the filler bar and strain isolation pad that is used in the attachment of tiles to the aluminum substrate. Two tile locations on the Shuttle orbiter were considered, one on the lower surface of the fuselage and one on the lower surface of the wing. The gap heating analysis involved the calculation of external and internal gas pressures and temperatures, internal mass flow rates, and the transient thermal response of the thermal protection system. The results of the analysis are presented for the fuselage and wing location for several step heights. The results of a study to determine the effectiveness of a half height ceramic fiber gap filler in preventing hot gas flow in the tile gaps are also presented.

  5. Hydrocarbon deposition in gaps of tungsten and graphite tiles in Experimental Advanced Superconducting Tokamak edge plasma parameters

    NASA Astrophysics Data System (ADS)

    Xu, Qian; Yang, Zhongshi; Luo, Guang-Nan

    2015-09-01

    The three-dimensional (3D) Monte Carlo code PIC-EDDY has been utilized to investigate the mechanism of hydrocarbon deposition in gaps of tungsten tiles in the Experimental Advanced Superconducting Tokamak (EAST), where the sheath potential is calculated by the 2D in space and 3D in velocity particle-in-cell method. The calculated results for graphite tiles using the same method are also presented for comparison. Calculation results show that the amount of carbon deposited in the gaps of carbon tiles is three times larger than that in the gaps of tungsten tiles when the carbon particles from re-erosion on the top surface of monoblocks are taken into account. However, the deposition amount is found to be larger in the gaps of tungsten tiles at the same CH4 flux. When chemical sputtering becomes significant as carbon coverage on tungsten increases with exposure time, the deposition inside the gaps of tungsten tiles would be considerable.

  6. Survival of Staphylococcus aureus exposed to UV radiation on the surface of ceramic tiles coated with TiO2.

    PubMed

    Szczawiński, J; Tomaszewski, H; Jackowska-Tracz, A; Szczawińska, M E

    2011-01-01

    The aim of this study was to determine and compare the antimicrobial activity of UV radiation of wavelength 253.7 nm (used in typical germicidal lamps) against Staphylococcus aureus on the surfaces of conventionally produced white ceramic wall tiles (matt and shiny) and the same tiles coated with TiO2 using three different methods: RF diode sputtering, atmospheric pressure chemical vapour deposition (APCVD) and spray pyrolysis deposition (SPD). Results clearly indicate that the bactericidal action of UV radiation is much stronger on the surfaces of tiles coated with TiO2 than on the tiles uncovered. The strongest bactericidal effect of UV radiation was found for film prepared by APCVD. Results of experiments for shiny and matt tiles did not differ statistically. The use of ceramic wall tiles coated with TiO2 films in hospitals, veterinary clinics, laboratories, food processing plants and other places where UV radiation is applied for disinfection should greatly improve the efficiency of this treatment.

  7. Performance of LI-1542 reusable surface insulation system in a hypersonic stream

    NASA Technical Reports Server (NTRS)

    Hunt, L. R.; Shideler, J. L.; Weinstein, I.

    1976-01-01

    The thermal and structural performance LI-1542 reusable surface insulation (RSI) tiles was investigated. The test panel was designed to represent part of the surface structure on a space shuttle orbiter fuselage along a 1250 K isotherm. Aerothermal tests were conducted at a free-stream Mach number of 6.6, a total temperature of 1820 K, Reynolds numbers of 2 millon and 5 million per meter, and dynamic pressures of 26 and 65 kPa. The RSI tiles demonstrated good thermal protection and structural integrity. High temperatures were caused by misalinement in tile height, offset the tile longitudinal alinement, and leakage around thermal seals when differential pressure existed across the panel. The damage tolerance of LI-1542 RSI appeared high. The tile coating crazed early in the test program, but this did not effect the tile integrity. Erosion of the tile edges occurred at forward-facing steps and at the ends of longitudinal gaps because of particle impacts and flow shear.

  8. Analyses of microstructure, composition and retention of hydrogen isotopes in divertor tiles of JET with the ITER-like wall

    NASA Astrophysics Data System (ADS)

    Masuzaki, S.; Tokitani, M.; Otsuka, T.; Oya, Y.; Hatano, Y.; Miyamoto, M.; Sakamoto, R.; Ashikawa, N.; Sakurada, S.; Uemura, Y.; Azuma, K.; Yumizuru, K.; Oyaizu, M.; Suzuki, T.; Kurotaki, H.; Hamaguchi, D.; Isobe, K.; Asakura, N.; Widdowson, A.; Heinola, K.; Jachmich, S.; Rubel, M.; contributors, JET

    2017-12-01

    Results of the comprehensive surface analyses of divertor tiles and dusts retrieved from JET after the first ITER-like wall campaign (2011-2012) are presented. The samples cored from the divertor tiles were analyzed. Numerous nano-size bubble-like structures were observed in the deposition layer on the apron of the inner divertor tile, and a beryllium dust with the same structures were found in the matter collected from the inner divertor after the campaign. This suggests that the nano-size bubble-like structures can make the deposition layer to become brittle and may lead to cracking followed by dust generation. X-ray photoelectron spectroscopy analyses of chemical states of species in the deposition layers identified the formation of beryllium-tungsten intermetallic compounds on an inner vertical tile. Different tritium retention profiles along the divertor tiles were observed at the top surfaces and at deeper regions of the tiles by using the imaging plate technique.

  9. Finishing of display glass for mobile electronics using 3M Trizact diamond tile abrasive pads

    NASA Astrophysics Data System (ADS)

    Zheng, Lianbin; Fletcher, Tim; Na, Tee Koon; Sventek, Bruce; Romero, Vince; Lugg, Paul S.; Kim, Don

    2010-10-01

    This paper will describe a new method being used during the finishing of glass displays for mobile electronics including mobile hand held devices and notebook computers. The new method consists of using 3M TrizactTM Diamond Tile Abrasive Pads. TrizactTM Diamond Tile is a structured fixed abrasive grinding technology developed by 3M Company. The TrizactTM Diamond Tile structured abrasive pad consists of an organic (polymeric binder) - inorganic (abrasive mineral, i.e., diamond) composite that is used with a water-based coolant. TrizactTM Diamond Tile technology can be applied in both double and single side grinding applications. A unique advantage of TrizactTM Diamond Tile technology is the combination of high stock removal and low sub-surface damage. Grinding results will be presented for both 9 micron and 20 micron grades of TrizactTM Diamond Tile abrasive pads used to finish several common display glasses including Corning GorillaTM glass and Soda Lime glass.

  10. How to describe disordered structures

    PubMed Central

    Nishio, Kengo; Miyazaki, Takehide

    2016-01-01

    Disordered structures such as liquids and glasses, grains and foams, galaxies, etc. are often represented as polyhedral tilings. Characterizing the associated polyhedral tiling is a promising strategy to understand the disordered structure. However, since a variety of polyhedra are arranged in complex ways, it is challenging to describe what polyhedra are tiled in what way. Here, to solve this problem, we create the theory of how the polyhedra are tiled. We first formulate an algorithm to convert a polyhedron into a codeword that instructs how to construct the polyhedron from its building-block polygons. By generalizing the method to polyhedral tilings, we describe the arrangements of polyhedra. Our theory allows us to characterize polyhedral tilings, and thereby paves the way to study from short- to long-range order of disordered structures in a systematic way. PMID:27064833

  11. How to describe disordered structures

    NASA Astrophysics Data System (ADS)

    Nishio, Kengo; Miyazaki, Takehide

    2016-04-01

    Disordered structures such as liquids and glasses, grains and foams, galaxies, etc. are often represented as polyhedral tilings. Characterizing the associated polyhedral tiling is a promising strategy to understand the disordered structure. However, since a variety of polyhedra are arranged in complex ways, it is challenging to describe what polyhedra are tiled in what way. Here, to solve this problem, we create the theory of how the polyhedra are tiled. We first formulate an algorithm to convert a polyhedron into a codeword that instructs how to construct the polyhedron from its building-block polygons. By generalizing the method to polyhedral tilings, we describe the arrangements of polyhedra. Our theory allows us to characterize polyhedral tilings, and thereby paves the way to study from short- to long-range order of disordered structures in a systematic way.

  12. Jagged Tiling for Intra-tile Parallelism and Fine-Grain Multithreading

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Shrestha, Sunil; Manzano Franco, Joseph B.; Marquez, Andres

    In this paper, we have developed a novel methodology that takes into consideration multithreaded many-core designs to better utilize memory/processing resources and improve memory residence on tileable applications. It takes advantage of polyhedral analysis and transformation in the form of PLUTO, combined with a highly optimized finegrain tile runtime to exploit parallelism at all levels. The main contributions of this paper include the introduction of multi-hierarchical tiling techniques that increases intra tile parallelism; and a data-flow inspired runtime library that allows the expression of parallel tiles with an efficient synchronization registry. Our current implementation shows performance improvements on an Intelmore » Xeon Phi board up to 32.25% against instances produced by state-of-the-art compiler frameworks for selected stencil applications.« less

  13. Fast imputation using medium or low-coverage sequence data

    USDA-ARS?s Scientific Manuscript database

    Accurate genotype imputation can greatly reduce costs and increase benefits by combining whole-genome sequence data of varying read depth and microarray genotypes of varying densities. For large populations, an efficient strategy chooses the two haplotypes most likely to form each genotype and updat...

  14. Application of Terahertz Radiation to the Detection of Corrosion Under the Shuttle's Thermal Protection System

    NASA Astrophysics Data System (ADS)

    Madaras, Eric I.; Anastasi, Robert F.; Smith, Stephen W.; Seebo, Jeffrey P.; Walker, James L.; Lomness, Janice K.; Hintze, Paul E.; Kammerer, Catherine C.; Winfree, William P.; Russell, Richard W.

    2008-02-01

    There is currently no method for detecting corrosion under Shuttle tiles except for the expensive process of tile removal and replacement; hence NASA is investigating new NDE methods for detecting hidden corrosion. Time domain terahertz radiation has been applied to corrosion detection under tiles in samples ranging from small lab samples to a Shuttle with positive results. Terahertz imaging methods have been able to detect corrosion at thicknesses of 5 mils or greater under 1" thick Shuttle tiles and 7-12 mils or greater under 2" thick Shuttle tiles.

  15. NASA TileWorld manual (system version 2.2)

    NASA Technical Reports Server (NTRS)

    Philips, Andrew B.; Bresina, John L.

    1991-01-01

    The commands are documented of the NASA TileWorld simulator, as well as providing information about how to run it and extend it. The simulator, implemented in Common Lisp with Common Windows, encodes a particular range in a spectrum of domains, for controllable research experiments. TileWorld consists of a two dimensional grid of cells, a set of polygonal tiles, and a single agent which can grasp and move tiles. In addition to agent executable actions, there is an external event over which the agent has not control; this event correspond to a 'gust of wind'.

  16. Application of Terahertz Radiation to the Detection of Corrosion under the Shuttle's Thermal Protection System

    NASA Technical Reports Server (NTRS)

    Madaras, Eric I.; Anastasi, Robert F.; Smith, Stephen W.; Seebo, Jeffrey P.; Walker, James L.; Lomness, Janice K.; Hintze, Paul E.; Kammerer, Catherine C.; Winfree, William P.; Russell, Richard W.

    2007-01-01

    There is currently no method for detecting corrosion under Shuttle tiles except for the expensive process of tile removal and replacement; hence NASA is investigating new NDE methods for detecting hidden corrosion. Time domain terahertz radiation has been applied to corrosion detection under tiles in samples ranging from small lab samples to a Shuttle with positive results. Terahertz imaging methods have been able to detect corrosion at thicknesses of 5 mils or greater under 1" thick Shuttle tiles and 7-12 mils or greater under 2" thick Shuttle tiles.

  17. Comparative Analysis of CNV Calling Algorithms: Literature Survey and a Case Study Using Bovine High-Density SNP Data.

    PubMed

    Xu, Lingyang; Hou, Yali; Bickhart, Derek M; Song, Jiuzhou; Liu, George E

    2013-06-25

    Copy number variations (CNVs) are gains and losses of genomic sequence between two individuals of a species when compared to a reference genome. The data from single nucleotide polymorphism (SNP) microarrays are now routinely used for genotyping, but they also can be utilized for copy number detection. Substantial progress has been made in array design and CNV calling algorithms and at least 10 comparison studies in humans have been published to assess them. In this review, we first survey the literature on existing microarray platforms and CNV calling algorithms. We then examine a number of CNV calling tools to evaluate their impacts using bovine high-density SNP data. Large incongruities in the results from different CNV calling tools highlight the need for standardizing array data collection, quality assessment and experimental validation. Only after careful experimental design and rigorous data filtering can the impacts of CNVs on both normal phenotypic variability and disease susceptibility be fully revealed.

  18. Comparative analysis of growth-phase-dependent gene expression in virulent and avirulent Streptococcus pneumoniae using a high-density DNA microarray.

    PubMed

    Ko, Kwan Soo; Park, Sulhee; Oh, Won Sup; Suh, Ji-Yoeun; Oh, Taejeong; Ahn, Sungwhan; Chun, Jongsik; Song, Jae-Hoon

    2006-02-28

    The global pattern of growth-dependent gene expres-sion in Streptococcus pneumoniae strains was evalu-ated using a high-density DNA microarray. Total RNAs obtained from an avirulent S. pneumoniae strain R6 and a virulent strain AMC96-6 were used to compare the expression patterns at seven time points (2.5, 3.5, 4.5, 5.5, 6.0, 6.5, and 8.0 h). The expression profile of strain R6 changed between log and station-ary growth (the Log-Stat switch). There were clear differences between the growth-dependent gene ex-pression profiles of the virulent and avirulent pneumo-coccal strains in 367 of 1,112 genes. Transcripts of genes associated with bacterial competence and capsular polysaccharide formation, as well as clpP and cbpA, were higher in the virulent strain. Our data suggest that late log or early stationary phase may be the most virulent phase of S. pneumoniae.

  19. Self assembly of rectangular shapes on concentration programming and probabilistic tile assembly models

    PubMed Central

    Rajasekaran, Sanguthevar

    2013-01-01

    Efficient tile sets for self assembling rectilinear shapes is of critical importance in algorithmic self assembly. A lower bound on the tile complexity of any deterministic self assembly system for an n × n square is Ω(log(n)log(log(n))) (inferred from the Kolmogrov complexity). Deterministic self assembly systems with an optimal tile complexity have been designed for squares and related shapes in the past. However designing Θ(log(n)log(log(n))) unique tiles specific to a shape is still an intensive task in the laboratory. On the other hand copies of a tile can be made rapidly using PCR (polymerase chain reaction) experiments. This led to the study of self assembly on tile concentration programming models. We present two major results in this paper on the concentration programming model. First we show how to self assemble rectangles with a fixed aspect ratio (α:β), with high probability, using Θ(α + β) tiles. This result is much stronger than the existing results by Kao et al. (Randomized self-assembly for approximate shapes, LNCS, vol 5125. Springer, Heidelberg, 2008) and Doty (Randomized self-assembly for exact shapes. In: proceedings of the 50th annual IEEE symposium on foundations of computer science (FOCS), IEEE, Atlanta. pp 85–94, 2009)—which can only self assembly squares and rely on tiles which perform binary arithmetic. On the other hand, our result is based on a technique called staircase sampling. This technique eliminates the need for sub-tiles which perform binary arithmetic, reduces the constant in the asymptotic bound, and eliminates the need for approximate frames (Kao et al. Randomized self-assembly for approximate shapes, LNCS, vol 5125. Springer, Heidelberg, 2008). Our second result applies staircase sampling on the equimolar concentration programming model (The tile complexity of linear assemblies. In: proceedings of the 36th international colloquium automata, languages and programming: Part I on ICALP ’09, Springer-Verlag, pp 235–253, 2009), to self assemble rectangles (of fixed aspect ratio) with high probability. The tile complexity of our algorithm is Θ(log(n)) and is optimal on the probabilistic tile assembly model (PTAM)—n being an upper bound on the dimensions of a rectangle. PMID:24311993

  20. Tiling a figure using a height in a tree

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Remila, E.

    1996-12-31

    We first give a new presentation of an algorithm from Thurston of tiling with lozenges formed from two cells of the triangular lattice A. Secondly we extend the method to get a linear algorithm of tiling with leaning dominoes (parallelograms formed from four cells of {Lambda}) and triangles (formed from four cells of {Lambda}). Thirdly, we produce a quadratic algorithm of tiling with leaning dominoes.

  1. Priority coding for control room alarms

    DOEpatents

    Scarola, Kenneth; Jamison, David S.; Manazir, Richard M.; Rescorl, Robert L.; Harmon, Daryl L.

    1994-01-01

    Indicating the priority of a spatially fixed, activated alarm tile on an alarm tile array by a shape coding at the tile, and preferably using the same shape coding wherever the same alarm condition is indicated elsewhere in the control room. The status of an alarm tile can change automatically or by operator acknowledgement, but tones and/or flashing cues continue to provide status information to the operator.

  2. Contributions of systematic tile drainage to watershed-scale phosphorus transport.

    PubMed

    King, Kevin W; Williams, Mark R; Fausey, Norman R

    2015-03-01

    Phosphorus (P) transport from agricultural fields continues to be a focal point for addressing harmful algal blooms and nuisance algae in freshwater systems throughout the world. In humid, poorly drained regions, attention has turned to P delivery through subsurface tile drainage. However, research on the contributions of tile drainage to watershed-scale P losses is limited. The objective of this study was to evaluate long-term P movement through tile drainage and its manifestation at the watershed outlet. Discharge data and associated P concentrations were collected for 8 yr (2005-2012) from six tile drains and from the watershed outlet of a headwater watershed within the Upper Big Walnut Creek watershed in central Ohio. Results showed that tile drainage accounted for 47% of the discharge, 48% of the dissolved P, and 40% of the total P exported from the watershed. Average annual total P loss from the watershed was 0.98 kg ha, and annual total P loss from the six tile drains was 0.48 kg ha. Phosphorus loads in tile and watershed discharge tended to be greater in the winter, spring, and fall, whereas P concentrations were greatest in the summer. Over the 8-yr study, P transported in tile drains represented <2% of typical application rates in this watershed, but >90% of all measured concentrations exceeded recommended levels (0.03 mg L) for minimizing harmful algal blooms and nuisance algae. Thus, the results of this study show that in systematically tile-drained headwater watersheds, the amount of P delivered to surface waters via tile drains cannot be dismissed. Given the amount of P loss relative to typical application rates, development and implementation of best management practices (BMPs) must jointly consider economic and environmental benefits. Specifically, implementation of BMPs should focus on late fall, winter, and early spring seasons when most P loading occurs. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

  3. Advances in Natural Quasicrystals and Quasicrystal Tilings

    NASA Astrophysics Data System (ADS)

    Lin, Chaney C.

    The first part of this dissertation reports recent progress on natural quasicrystals. We present new evidence from a fragment of the quasicrystal-bearing CV3 carbonaceous chondritic meteorite Khatyrka that shows cross-cutting relationships and redox reaction between Al-Cu-bearing alloys and silicate phases. The new evidence establishes that the Al-Cu-bearing alloys (including quasicrystals) formed in outer space during a complex, multi-stage process. Some Al-bearing grains (including some quasicrystals) formed as a direct result of an impact in space a few 100 Ma. Most other Al-bearing grains (including quasicrystals) existed prior to the impact and thus formed in space at an earlier time. We also present the discovery of two new quasicrystals, including a second distinct Al-Cu-Fe icosahedral phase in Khatyrka--the first quasicrystal found in nature prior to discovery in the lab--and a synthetic Al-Fe-Cu-Cr-Ni icosahedral phase--the first quasicrystal to be synthesized in a laboratory shock experiment. In the second part of this dissertation, we explore how different local isomorphism (LI) classes of quasicrystals vary in their structural and physical properties. We examine the continuum of LI classes of pentagonal quasicrystal tilings obtained by direct projection from a five-dimensional hypercubic lattice. Our initial focus is on hyperuniformity, the suppression of long-wavelength density fluctuations relative to typical structurally disordered systems. We study how the degree of hyperuniformity depends on LI class. The results show that the degree of hyperuniformity is dominantly determined by the local distribution of vertex environments, and also exhibits a non-negligible dependence on the restorability. Among the pentagonal quasicrystal tilings, the Penrose tiling is the most hyperuniform. The difference in the degree of hyperuniformity is expected to affect physical characteristics, such as transport properties. We then turn to a study of photonic quasicrystal heterostructures derived from the continuum of pentagonal quasicrystal tilings. We demonstrate that, with the exception of the Penrose LI class, all other LI classes result in degenerate, effectively localized states, with precisely predictable and tunable properties (frequencies, frequency splittings, spatial configurations). A relationship between the degeneracy of these states and the number of certain vertex environments is discussed, and potential applications for these states are described.

  4. Simulating the Effects of Drainage and Agriculture on Hydrology and Sediment in the Minnesota River Basin

    NASA Astrophysics Data System (ADS)

    Downer, C. W.; Pradhan, N. R.; Skahill, B. E.; Banitt, A. M.; Eggers, G.; Pickett, R. E.

    2014-12-01

    Throughout the Midwest region of the United States, slopes are relatively flat, soils tend to have low permeability, and local water tables are high. In order to make the region suitable for agriculture, farmers have installed extensive networks of ditches to drain off excess surface water and subsurface tiles to lower the water table and remove excess soil water in the root zone that can stress common row crops, such as corn and soybeans. The combination of tiles, ditches, and intensive agricultural land practices radically alters the landscape and hydrology. Within the watershed, tiles have outlets to both the ditch/stream network as well as overland locations, where the tile discharge appears to initiate gullies and exacerbate overland erosion. As part of the Minnesota River Basin Integrated Study we are explicitly simulating the tile and drainage systems in the watershed at multiple scales using the physics-based watershed model GSSHA (Gridded Surface Subsurface Hydrologic Analysis). The tile drainage system is simulated as a network of pipes that collect water from the local water table. Within the watershed, testing of the methods on smaller basins shows the ability of the model to simulate tile flow, however, application at the larger scale is hampered by the computational burden of simulating the flow in the complex tile drain networks that drain the agricultural fields. Modeling indicates the subsurface drains account for approximately 40% of the stream flow in the Seven Mile Creek sub-basin account in the late spring and early summer when the tile is flowing. Preliminary results indicate that agricultural tile drains increase overland erosion in the Seven Mile Creek watershed.

  5. Seamless stitching of tile scan microscope images.

    PubMed

    Legesse, F B; Chernavskaia, O; Heuke, S; Bocklitz, T; Meyer, T; Popp, J; Heintzmann, R

    2015-06-01

    For diagnostic purposes, optical imaging techniques need to obtain high-resolution images of extended biological specimens in reasonable time. The field of view of an objective lens, however, is often smaller than the sample size. To image the whole sample, laser scanning microscopes acquire tile scans that are stitched into larger mosaics. The appearance of such image mosaics is affected by visible edge artefacts that arise from various optical aberrations which manifest in grey level jumps across tile boundaries. In this contribution, a technique for stitching tiles into a seamless mosaic is presented. The stitching algorithm operates by equilibrating neighbouring edges and forcing the brightness at corners to a common value. The corrected image mosaics appear to be free from stitching artefacts and are, therefore, suited for further image analysis procedures. The contribution presents a novel method to seamlessly stitch tiles captured by a laser scanning microscope into a large mosaic. The motivation for the work is the failure of currently existing methods for stitching nonlinear, multimodal images captured by our microscopic setups. Our method eliminates the visible edge artefacts that appear between neighbouring tiles by taking into account the overall illumination differences among tiles in such mosaics. The algorithm first corrects the nonuniform brightness that exists within each of the tiles. It then compensates for grey level differences across tile boundaries by equilibrating neighbouring edges and forcing the brightness at the corners to a common value. After these artefacts have been removed further image analysis procedures can be applied on the microscopic images. Even though the solution presented here is tailored for the aforementioned specific case, it could be easily adapted to other contexts where image tiles are assembled into mosaics such as in astronomical or satellite photos. © 2015 The Authors Journal of Microscopy © 2015 Royal Microscopical Society.

  6. FUNDAMENTALS OF VITAMIN D HORMONE-REGULATED GENE EXPRESSION

    PubMed Central

    Pike, J. Wesley; Meyer, Mark B.

    2014-01-01

    Initial research focused upon several known genetic targets provided early insight into the mechanism of action of the vitamin D hormone (1,25-dihydroxyvitamin D3 (1,25(OH)2D3)). Recently, however, a series of technical advances involving the coupling of chromatin immunoprecipitation (ChIP) to unbiased methodologies that initially involved tiled DNA microarrays (ChIP-chip analysis) and now Next Generation DNA Sequencing techniques (ChIP-Seq analysis) has opened new avenues of research into the mechanisms through which 1,25(OH)2D3 regulates gene expression. In this review, we summarize briefly the results of this early work and then focus on more recent studies in which ChIP-chip and ChIP-seq analyses have been used to explore the mechanisms of 1,25(OH)2D3 action on a genome-wide scale providing specific target genes as examples. The results of this work have advanced our understanding of the mechanisms involved at both genetic and epigenetic levels and have revealed a series of new principles through which the vitamin D hormone functions to control the expression of genes. PMID:24239506

  7. Elevated waterproof access floor system and method of making the same

    NASA Technical Reports Server (NTRS)

    Cohen, Marc M. (Inventor)

    1987-01-01

    An elevated waterproof access floor system having subfloor channels or compartments for power lines, gas lines or the like is adapted such that it can be opened and subsequently resealed without destroying the waterproofing and without destroying its aesthetic appearance. A multiplicity of tiles are supported on a support grid, and a flooring sheet is supported on the tiles. Attachment means are provided to prevent lateral but not vertical movement of the flooring sheet with respect to the tiles so that the flooring sheet can be lifted off the tiles, but when the flooring sheet is supported on the tiles, no lateral slipping will occur. The flooring sheet is made of a heat resealable material, so that it can be cut away in sections, and the tiles therebelow lifted off, to provide access to subfloor compartments.

  8. Development of anti-slip sustainable tiles from agricultural waste

    NASA Astrophysics Data System (ADS)

    Zulkefli, Zainordin Firdaus; Zainol, Mohd Remy Rozainy Mohd Arif; Osman, Norhayati

    2017-04-01

    In general of 80% the human activities is located in the building. Buildings constructed should be in line with full functions and optimum safety features. Aspects to be emphasized is the slip on the floor of the building. The selection of tiles must have anti-slip characteristics and achieve standard strength stress. This study is conducted to develop anti-slip tiles modification using agricultural waste. The material used is agricultural waste such rice husks, palm fibre and saw dusk mixed into the clay and then baked at a temperature of 900-1185 C °. Agricultural waste mixture ratio is 5%, 10% and 15%. The samples of tiles are produced for experiments. The results of agricultural waste tiles show that the strength is higher than standard strength, the water absorption less than standard tiles and pendulum value test is exceeds 36.

  9. Automated 3D Damaged Cavity Model Builder for Lower Surface Acreage Tile on Orbiter

    NASA Technical Reports Server (NTRS)

    Belknap, Shannon; Zhang, Michael

    2013-01-01

    The 3D Automated Thermal Tool for Damaged Acreage Tile Math Model builder was developed to perform quickly and accurately 3D thermal analyses on damaged lower surface acreage tiles and structures beneath the damaged locations on a Space Shuttle Orbiter. The 3D model builder created both TRASYS geometric math models (GMMs) and SINDA thermal math models (TMMs) to simulate an idealized damaged cavity in the damaged tile(s). The GMMs are processed in TRASYS to generate radiation conductors between the surfaces in the cavity. The radiation conductors are inserted into the TMMs, which are processed in SINDA to generate temperature histories for all of the nodes on each layer of the TMM. The invention allows a thermal analyst to create quickly and accurately a 3D model of a damaged lower surface tile on the orbiter. The 3D model builder can generate a GMM and the correspond ing TMM in one or two minutes, with the damaged cavity included in the tile material. A separate program creates a configuration file, which would take a couple of minutes to edit. This configuration file is read by the model builder program to determine the location of the damage, the correct tile type, tile thickness, structure thickness, and SIP thickness of the damage, so that the model builder program can build an accurate model at the specified location. Once the models are built, they are processed by the TRASYS and SINDA.

  10. Influence of Tile Geometry on the Dynamic Fracture of Silicon Carbide (SiC)

    DTIC Science & Technology

    2014-03-01

    velocity was 440 ± 5.6 m/s. Two flash x-rays were set up above the shot line in front of the light gas gun to measure the velocity of the projectile...long, high-density polyurethane foam sabot. A sabot stripper on the muzzle of the gun disengaged the sabot from the sphere prior to velocity...the masses were consistent to achieve a constant velocity. The projectile traveled from the gun, through a break screen which triggered two flash x

  11. Gene-body hypermethylation of ATM in peripheral blood DNA of bilateral breast cancer patients

    PubMed Central

    Flanagan, James M.; Munoz-Alegre, Marta; Henderson, Stephen; Tang, Thomas; Sun, Ping; Johnson, Nichola; Fletcher, Olivia; dos Santos Silva, Isabel; Peto, Julian; Boshoff, Chris; Narod, Steven; Petronis, Arturas

    2009-01-01

    Bilaterality of breast cancer is an indicator of constitutional cancer susceptibility; however, the molecular causes underlying this predisposition in the majority of cases is not known. We hypothesize that epigenetic misregulation of cancer-related genes could partially account for this predisposition. We have performed methylation microarray analysis of peripheral blood DNA from 14 women with bilateral breast cancer compared with 14 unaffected matched controls throughout 17 candidate breast cancer susceptibility genes including BRCA1, BRCA2, CHEK2, ATM, ESR1, SFN, CDKN2A, TP53, GSTP1, CDH1, CDH13, HIC1, PGR, SFRP1, MLH1, RARB and HSD17B4. We show that the majority of methylation variability is associated with intragenic repetitive elements. Detailed validation of the tiled region around ATM was performed by bisulphite modification and pyrosequencing of the same samples and in a second set of peripheral blood DNA from 190 bilateral breast cancer patients compared with 190 controls. We show significant hypermethylation of one intragenic repetitive element in breast cancer cases compared with controls (P = 0.0017), with the highest quartile of methylation associated with a 3-fold increased risk of breast cancer (OR 3.20, 95% CI 1.78–5.86, P = 0.000083). Increased methylation of this locus is associated with lower steady-state ATM mRNA level and correlates with age of cancer patients but not controls, suggesting a combined age–phenotype-related association. This research demonstrates the potential for gene-body epigenetic misregulation of ATM and other cancer-related genes in peripheral blood DNA that may be useful as a novel marker to estimate breast cancer risk. Accession numbers: The microarray data and associated .BED and .WIG files can be accessed through Gene Expression Omnibus accession number: GSE14603. PMID:19153073

  12. Machine Intelligence

    DTIC Science & Technology

    2013-03-01

    Although this approach is an improvement over fixed tile coding methods like CMAC, it suffers from a significant drawback . This approach splits the tiles in...serious drawbacks to using them effectively. Engineering a tiling is typically done by hand, and it can be very difficult to find an appropriate tiling...however, there are still some drawbacks that need to be addressed. While the boundaries are redrawn according to the chance of a mutation to the neural

  13. 75 FR 28316 - Notice of Buy America Waiver Request by Oregon Department of Transportation for Steel Roof Tiles...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2010-05-20

    ... by Oregon Department of Transportation for Steel Roof Tiles To Be Used in Union Station Roof... (``PRIIA'') (49 U.S.C. 24405(a)) for the purchase of metal roof tiles made of 40/45 KSI 2, 24 Gauge (0.0276... Register. This notice informs the public that ODOT has requested a Buy America waiver for the roofing tiles...

  14. Effects of waste glass and waste foundry sand additions on reclaimed tiles containing sewage sludge ash.

    PubMed

    Lin, Deng-Fong; Luo, Huan-Lin; Lin, Kuo-Liang; Liu, Zhe-Kun

    2017-07-01

    Applying sewage sludge ash (SSA) to produce reclaimed tiles is a promising recycling technology in resolving the increasing sludge wastes from wastewater treatment. However, performance of such reclaimed tiles is inferior to that of original ceramic tiles. Many researchers have therefore tried adding various industrial by-products to improve reclaimed tile properties. In this study, multiple materials including waste glass and waste foundry sand (WFS) were added in an attempt to improve physical and mechanical properties of reclaimed tiles with SSA. Samples with various combinations of clay, WFS, waste glass and SSA were made with three kiln temperatures of 1000°C, 1050°C, and 1100°C. A series of tests on the samples were next conducted. Test results showed that waste glass had positive effects on bending strength, water absorption and weight loss on ignition, while WFS contributed the most in reducing shrinkage, but could decrease the tile bending strength when large amount was added at a high kiln temperature. This study suggested that a combination of WFS from 10% to 15%, waste glass from 15% to 20%, SSA at 10% at a kiln temperature between 1000°C and 1050°C could result in quality reclaimed tiles with a balanced performance.

  15. Acid-Alkali Resistance of New Reclaimed Tiles Containing Sewage Sludge Ash and Waste Glass

    PubMed Central

    Lin, Deng-Fong; Lin, Kuo-Liang; Luo, Huan-Lin; Xu, Jia-Qin

    2016-01-01

    In this study, properties of newly developed reclaimed tiles in a harmful environment were investigated. A portion of clay used to manufacture tiles was replaced with sewage sludge ash (SSA) and waste glass to produce the new reclaimed tiles. To investigate the effects of SSA and waste glass on the properties of the tiles, different specimens were blended and placed in acid-alkali solutions. The reclaimed tile specimens were manufactured by clay, 10% SSA, and five different mixes of waste glass replacement, namely, 0%, 10%, 20%, 40%, and 60%. These specimens were calcined at 1000 °C and subsequently underwent a series of tests, including TGA/DTA (thermogravimetric analysis/differential thermal analysis), SEM (scanning electron microscopy), XRD (X-ray diffraction), bending strength, weight loss, and porosity. Test results show that shortcomings associated with the introduction of the sludge ash were improved by the admixture of waste glass, especially in the aspects of shrinkage and bending strength. The study showed that the new reclaimed tiles performed relatively well in acid-alkali resistance tests but appeared to have better alkali resistance than acid resistance. It was also found that the optimal mix of such reclaimed tiles was 10% SSA, 10% waste glass, and 80% clay. PMID:28773668

  16. Kinetics of DNA Tile Dimerization

    PubMed Central

    2015-01-01

    Investigating how individual molecular components interact with one another within DNA nanoarchitectures, both in terms of their spatial and temporal interactions, is fundamentally important for a better understanding of their physical behaviors. This will provide researchers with valuable insight for designing more complex higher-order structures that can be assembled more efficiently. In this report, we examined several spatial factors that affect the kinetics of bivalent, double-helical (DH) tile dimerization, including the orientation and number of sticky ends (SEs), the flexibility of the double helical domains, and the size of the tiles. The rate constants we obtained confirm our hypothesis that increased nucleation opportunities and well-aligned SEs accelerate tile–tile dimerization. Increased flexibility in the tiles causes slower dimerization rates, an effect that can be reversed by introducing restrictions to the tile flexibility. The higher dimerization rates of more rigid tiles results from the opposing effects of higher activation energies and higher pre-exponential factors from the Arrhenius equation, where the pre-exponential factor dominates. We believe that the results presented here will assist in improved implementation of DNA tile based algorithmic self-assembly, DNA based molecular robotics, and other specific nucleic acid systems, and will provide guidance to design and assembly processes to improve overall yield and efficiency. PMID:24794259

  17. Effects of occupational exposures and smoking on lung function in tile factory workers.

    PubMed

    Jaakkola, Maritta S; Sripaiboonkij, Penpatra; Jaakkola, Jouni J K

    2011-02-01

    The aims of this study were to investigate the relations of occupational exposures in tile industry to lung function and to evaluate potential interaction between smoking and tile dust exposure containing silica. A cross-sectional study of 232 workers (response rate 100%) in a tile factory and 76 office workers (response rate 73%) from four factories in Thailand was conducted in 2006-2007. Participants answered a questionnaire and performed spirometry. Factory workers had lower spirometric functions than office workers, especially those with high dust exposure. There was a dose-response relation between duration of dust exposure and FEV1 and FVC, the adjusted effect of ≥ 21 years of exposure on FEV1 being -240 ml (-100 to -380) and on FVC -300 ml (-140 to -460). The adverse effect of dust on lung function was larger in current smokers suggesting synergism between smoking and tile dust exposure. This study provides evidence that long-term exposure to dust in tile industry is related to lung function reduction. There was a suggestion of synergistic effect between dust exposure and smoking. Tile factories should consider measures to reduce dust exposure and arrange spirometry surveillance for workers with such exposure. Smoking cessation should be promoted to prevent harmful effects of occupational tile dust exposure.

  18. Low-Density microarray technologies for rapid human norovirus genotyping

    USDA-ARS?s Scientific Manuscript database

    Human noroviruses (HuNoV) are the most common cause of food borne disease and viruses are likely responsible for a large proportion of foodborne diseases of unknown etiology. Recent advancements in molecular biology, bioinformatics, epidemiology, and risk analysis have aided the study of these agent...

  19. Quantitative characterization of conformational-specific protein-DNA binding using a dual-spectral interferometric imaging biosensor

    NASA Astrophysics Data System (ADS)

    Zhang, Xirui; Daaboul, George G.; Spuhler, Philipp S.; Dröge, Peter; Ünlü, M. Selim

    2016-03-01

    DNA-binding proteins play crucial roles in the maintenance and functions of the genome and yet, their specific binding mechanisms are not fully understood. Recently, it was discovered that DNA-binding proteins recognize specific binding sites to carry out their functions through an indirect readout mechanism by recognizing and capturing DNA conformational flexibility and deformation. High-throughput DNA microarray-based methods that provide large-scale protein-DNA binding information have shown effective and comprehensive analysis of protein-DNA binding affinities, but do not provide information of DNA conformational changes in specific protein-DNA complexes. Building on the high-throughput capability of DNA microarrays, we demonstrate a quantitative approach that simultaneously measures the amount of protein binding to DNA and nanometer-scale DNA conformational change induced by protein binding in a microarray format. Both measurements rely on spectral interferometry on a layered substrate using a single optical instrument in two distinct modalities. In the first modality, we quantitate the amount of binding of protein to surface-immobilized DNA in each DNA spot using a label-free spectral reflectivity technique that accurately measures the surface densities of protein and DNA accumulated on the substrate. In the second modality, for each DNA spot, we simultaneously measure DNA conformational change using a fluorescence vertical sectioning technique that determines average axial height of fluorophores tagged to specific nucleotides of the surface-immobilized DNA. The approach presented in this paper, when combined with current high-throughput DNA microarray-based technologies, has the potential to serve as a rapid and simple method for quantitative and large-scale characterization of conformational specific protein-DNA interactions.DNA-binding proteins play crucial roles in the maintenance and functions of the genome and yet, their specific binding mechanisms are not fully understood. Recently, it was discovered that DNA-binding proteins recognize specific binding sites to carry out their functions through an indirect readout mechanism by recognizing and capturing DNA conformational flexibility and deformation. High-throughput DNA microarray-based methods that provide large-scale protein-DNA binding information have shown effective and comprehensive analysis of protein-DNA binding affinities, but do not provide information of DNA conformational changes in specific protein-DNA complexes. Building on the high-throughput capability of DNA microarrays, we demonstrate a quantitative approach that simultaneously measures the amount of protein binding to DNA and nanometer-scale DNA conformational change induced by protein binding in a microarray format. Both measurements rely on spectral interferometry on a layered substrate using a single optical instrument in two distinct modalities. In the first modality, we quantitate the amount of binding of protein to surface-immobilized DNA in each DNA spot using a label-free spectral reflectivity technique that accurately measures the surface densities of protein and DNA accumulated on the substrate. In the second modality, for each DNA spot, we simultaneously measure DNA conformational change using a fluorescence vertical sectioning technique that determines average axial height of fluorophores tagged to specific nucleotides of the surface-immobilized DNA. The approach presented in this paper, when combined with current high-throughput DNA microarray-based technologies, has the potential to serve as a rapid and simple method for quantitative and large-scale characterization of conformational specific protein-DNA interactions. Electronic supplementary information (ESI) available: DNA sequences and nomenclature (Table 1S); SDS-PAGE assay of IHF stock solution (Fig. 1S); determination of the concentration of IHF stock solution by Bradford assay (Fig. 2S); equilibrium binding isotherm fitting results of other DNA sequences (Table 2S); calculation of dissociation constants (Fig. 3S, 4S; Table 2S); geometric model for quantitation of DNA bending angle induced by specific IHF binding (Fig. 4S); customized flow cell assembly (Fig. 5S); real-time measurement of average fluorophore height change by SSFM (Fig. 6S); summary of binding parameters obtained from additive isotherm model fitting (Table 3S); average surface densities of 10 dsDNA spots and bound IHF at equilibrium (Table 4S); effects of surface densities on the binding and bending of dsDNA (Tables 5S, 6S and Fig. 7S-10S). See DOI: 10.1039/c5nr06785e

  20. High-throughput identification of proteins with AMPylation using self-assembled human protein (NAPPA) microarrays.

    PubMed

    Yu, Xiaobo; LaBaer, Joshua

    2015-05-01

    AMPylation (adenylylation) has been recognized as an important post-translational modification that is used by pathogens to regulate host cellular proteins and their associated signaling pathways. AMPylation has potential functions in various cellular processes, and it is widely conserved across both prokaryotes and eukaryotes. However, despite the identification of many AMPylators, relatively few candidate substrates of AMPylation are known. This is changing with the recent development of a robust and reliable method for identifying new substrates using protein microarrays, which can markedly expand the list of potential substrates. Here we describe procedures for detecting AMPylated and auto-AMPylated proteins in a sensitive, high-throughput and nonradioactive manner. The approach uses high-density protein microarrays fabricated using nucleic acid programmable protein array (NAPPA) technology, which enables the highly successful display of fresh recombinant human proteins in situ. The modification of target proteins is determined via copper-catalyzed azide-alkyne cycloaddition (CuAAC). The assay can be accomplished within 11 h.

  1. Assessment of a direct hybridization microarray strategy for comprehensive monitoring of genetically modified organisms (GMOs).

    PubMed

    Turkec, Aydin; Lucas, Stuart J; Karacanli, Burçin; Baykut, Aykut; Yuksel, Hakki

    2016-03-01

    Detection of GMO material in crop and food samples is the primary step in GMO monitoring and regulation, with the increasing number of GM events in the world market requiring detection solutions with high multiplexing capacity. In this study, we test the suitability of a high-density oligonucleotide microarray platform for direct, quantitative detection of GMOs found in the Turkish feed market. We tested 1830 different 60nt probes designed to cover the GM cassettes from 12 different GM cultivars (3 soya, 9 maize), as well as plant species-specific and contamination controls, and developed a data analysis method aiming to provide maximum throughput and sensitivity. The system was able specifically to identify each cultivar, and in 10/12 cases was sensitive enough to detect GMO DNA at concentrations of ⩽1%. These GMOs could also be quantified using the microarray, as their fluorescence signals increased linearly with GMO concentration. Copyright © 2015 Elsevier Ltd. All rights reserved.

  2. Shell tile thermal protection system

    NASA Technical Reports Server (NTRS)

    Macconochie, I. O.; Lawson, A. G.; Kelly, H. N. (Inventor)

    1984-01-01

    A reusable, externally applied thermal protection system for use on aerospace vehicles subject to high thermal and mechanical stresses utilizes a shell tile structure which effectively separates its primary functions as an insulator and load absorber. The tile consists of structurally strong upper and lower metallic shells manufactured from materials meeting the thermal and structural requirements incident to tile placement on the spacecraft. A lightweight, high temperature package of insulation is utilized in the upper shell while a lightweight, low temperature insulation is utilized in the lower shell. Assembly of the tile which is facilitated by a self-locking mechanism, may occur subsequent to installation of the lower shell on the spacecraft structural skin.

  3. KSC-08pd1968

    NASA Image and Video Library

    2008-07-14

    CAPE CANAVERAL, Fla. – In the tile shop at NASA's Kennedy Space Center, a Boeing Replacement Insulation 18, or BRI-18, tile bakes in a 2,200-degree oven to cure the ceramic coating. The baking is part of the process to prepare the tiles for installation on space shuttles. BRI-18 is the strongest material used for thermal insulation on the orbiters and, when coated to produce toughened unipiece fibrous insulation, provides a tile with extremely high-impact resistance. It is replacing other tiles on areas of the vehicle where impact risk is high, such as the landing gear doors, the wing leading edge and the external tank doors. Photo credit: NASA/Jim Grossmann

  4. KSC-08pd1970

    NASA Image and Video Library

    2008-07-14

    CAPE CANAVERAL, Fla. – In the tile shop at NASA's Kennedy Space Center, a Boeing Replacement Insulation 18, or BRI-18, tile still glows after being baked in a 2,200-degree oven. The baking is part of the process to prepare the tiles for installation on space shuttles. BRI-18 is the strongest material used for thermal insulation on the orbiters and, when coated to produce toughened unipiece fibrous insulation, provides a tile with extremely high-impact resistance. It is replacing other tiles on areas of the vehicle where impact risk is high, such as the landing gear doors, the wing leading edge and the external tank doors. Photo credit: NASA/Jim Grossmann

  5. KSC-08pd1964

    NASA Image and Video Library

    2008-07-14

    CAPE CANAVERAL, Fla. – In the tile shop at NASA's Kennedy Space Center, a Boeing Replacement Insulation 18, or BRI-18, tile is ready to be baked at 2,200 degrees Fahrenheit to cure the ceramic coating, part of the process to prepare the tiles for installation on space shuttles. BRI-18 is the strongest material used for thermal insulation on the orbiters and, when coated to produce toughened unipiece fibrous insulation, provides a tile with extremely high-impact resistance. It is replacing other tiles on areas of the vehicle where impact risk is high, such as the landing gear doors, the wing leading edge and the external tank doors. Photo credit: NASA/Jim Grossmann

  6. KSC-08pd1969

    NASA Image and Video Library

    2008-07-14

    CAPE CANAVERAL, Fla. – In the tile shop at NASA's Kennedy Space Center, a worker removes a Boeing Replacement Insulation 18, or BRI-18, tile from a 2,200-degree oven. The baking is part of the process to prepare the tiles for installation on space shuttles. BRI-18 is the strongest material used for thermal insulation on the orbiters and, when coated to produce toughened unipiece fibrous insulation, provides a tile with extremely high-impact resistance. It is replacing other tiles on areas of the vehicle where impact risk is high, such as the landing gear doors, the wing leading edge and the external tank doors. Photo credit: NASA/Jim Grossmann

  7. Thermal Structure Analysis of SIRCA Tile for X-34 Wing Leading Edge TPS

    NASA Technical Reports Server (NTRS)

    Milos, Frank S.; Squire, Thomas H.; Rasky, Daniel J. (Technical Monitor)

    1997-01-01

    This paper will describe in detail thermal/structural analyses of SIRCA tiles which were performed at NASA Ames under the The Tile Analysis Task of the X-34 Program. The analyses used the COSMOS/M finite element software to simulate the material response in arc-jet tests, mechanical deflection tests, and the performance of candidate designs for the TPS system. Purposes of the analysis were to verify thermal and structural models for the SIRCA tiles, to establish failure criteria for stressed tiles, to simulate the TPS response under flight aerothermal and mechanical load, and to confirm that adequate safety margins exist for the actual TPS design.

  8. INTERIOR VIEW OF BATHROOM 1 SHOWING THE MOSAICPATTERN TILE FLOOR. ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    INTERIOR VIEW OF BATHROOM 1 SHOWING THE MOSAIC-PATTERN TILE FLOOR. CERAMIC TILE WAINSCOT, AND CERAMIC ACCESSORIES. VIEW FACING NORTH. - Hickam Field, Officers' Housing Type H, 208 Sixth Street, Honolulu, Honolulu County, HI

  9. Modeling flow and solute transport at a tile drain field site by explicit representation of preferential flow structures: Equifinality and uncertainty

    NASA Astrophysics Data System (ADS)

    Zehe, E.; Klaus, J.

    2011-12-01

    Rapid flow in connected preferential flow paths is crucial for fast transport of water and solutes through soils, especially at tile drained field sites. The present study tests whether an explicit treatment of worm burrows is feasible for modeling water flow, bromide and pesticide transport in structured heterogeneous soils with a 2-dimensional Richards based model. The essence is to represent worm burrows as morphologically connected paths of low flow resistance and low retention capacity in the spatially highly resolved model domain. The underlying extensive database to test this approach was collected during an irrigation experiment, which investigated transport of bromide and the herbicide Isoproturon at a 900 sqm tile drained field site. In a first step we investigated whether the inherent uncertainty in key data causes equifinality i.e. whether there are several spatial model setups that reproduce tile drain event discharge in an acceptable manner. We found a considerable equifinality in the spatial setup of the model, when key parameters such as the area density of worm burrows and the maximum volumetric water flows inside these macropores were varied within the ranges of either our measurement errors or measurements reported in the literature. Thirteen model runs yielded a Nash-Sutcliffe coefficient of more than 0.9. Also, the flow volumes were in good accordance and peak timing errors where less than or equal to 20 min. In the second step we investigated thus whether this "equifinality" in spatial model setups may be reduced when including the bromide tracer data into the model falsification process. We simulated transport of bromide for the 13 spatial model setups, which performed best with respect to reproduce tile drain event discharge, without any further calibration. Four of this 13 model setups allowed to model bromide transport within fixed limits of acceptability. Parameter uncertainty and equifinality could thus be reduced. Thirdly, we selected one of those four setups for simulating transport of Isoproturon, which was applied the day before the irrigation experiment, and tested different parameter combinations to characterise adsorption according to the footprint data base. Simulations could, however, only reproduce the observed event based leaching behaviour, when we allowed for retardation coefficients that were very close to one. This finding is consistent with observations various field observations. We conclude: a) A realistic representation of dominating structures and their topology is of key importance for predicting preferential water and mass flows at tile drained hillslopes. b) Parameter uncertainty and equifinality could be reduced, but a system inherent equifinality in a 2-dimensional Richards based model has to be accepted.

  10. Modelling rapid flow response of a tile drained hillslope with explicit representation of preferential flow paths and consideration of equifinal model structures

    NASA Astrophysics Data System (ADS)

    Klaus, Julian; Zehe, Erwin

    2010-05-01

    Rapid water flow along spatially connected - often biologically mediated - flow paths of minimum flow resistance is widely acknowledged to play a key role in runoff generation at the hillslope and small catchment scales but also in the transport of solutes like agro chemicals and nutrients in cohesive soils. Especially at tile drained fields site connected vertical flow structures such as worm burrows, roots or shrinkage cracks act as short cuts allowing water flow to bypass the soil matrix. In the present study we propose a spatially explicit approach to represent worm burrows as connected structures of high conductivity and low retention capacity in a 2D physically model. With this approach tile drain discharge and preferential flow patterns in soil observed during the irrigation of a tile drained hillslope in the Weiherbach catchment were modelled. The model parameters derived from measurements and are considered to be uncertain. Given this uncertainty of key factors that organise flow and transport at tile drained sites the main objectives of the present studies are to shed light on the following three questions: 1. Does a simplified approach that explicitly represents worm burrows as continuous flow paths of small flow resistance and low retention properties in a 2D physically model allow successful reproduction of event flow response at a tile drained field site in the Weiherbach catchment? 2. Does the above described uncertainty in key factors cause equifinality i.e. are there several model structural setups that reproduce event flow response in an acceptable manner without compromising our physical understanding of the system? 3. If so, what are the key factors that have to be known at high accuracy to reduce the equifinality of model structures? The issue of equifinality is usually discussed in catchment modelling to indicate that often a large set of conceptual model parameter sets allows acceptable reproduction of the behaviour of the system of interest - in many cases catchment stream flow response. Beven and Binley (1992) suggest that these model structures should be considered to be equally likely to account for predictive uncertainty. In this study we show that the above outline approach allows successful prediction of the tile drain discharge and preferential flow patterns in soil observed during the irrigation of a tile drained hillslope in the Weiherbach catchment flow event. Strikingly we a found a considerable equifinality in the model structural setup, when key parameters such as the area density of worm burrows, their hydraulic conductivity and the conductivity of the tile drains were varied within the ranges of either our measurements or measurements reported in the literature. Thirteen different model setups yielded a normalised time-shifted Nash-Sutcliffe of more than 0.9, which means that more than 90% of the flow variability is explained by the model. Also the flow volumes were in good accordance and timing errors were less or equal than 20 min (which corresponds to two simulation output time steps). It is elaborated that this uncertainty/equifinality could be reduced when more precise data on initial states of the subsurface and on the drainage area of a single drainage tube could be made available. However, such data are currently most difficult to assess even at very well investigated site as the one that is dealt with here. We thus suggest non uniqueness of process based model structures seems thus to be an important factor causing predictive uncertainty at many sites where preferential flow dominates systems response. References Beven, K.J. and Binley, A.M., 1992. The future of distributed models: model calibration and uncertainty prediction, Hydrological Processes, 6, p.279-298.

  11. Natural radioactivity and radon exhalation rates in man-made tiles used as building materials in Japan.

    PubMed

    Iwaoka, K; Hosoda, M; Suwankot, N; Omori, Y; Ishikawa, T; Yonehara, H; Tokonami, S

    2015-11-01

    Man-made tiles frequently used in Japan were collected, and activity concentrations and radon ((222)Rn) exhalation rates in these tiles were measured. Dose estimations for inhabitants living in houses built using these tiles were also carried out. The activity concentrations of (226)Ra, (228)Ra and (40)K in the man-made tiles were 31-170, 35-110 and 260-980 Bq kg(-1), respectively. The (222)Rn exhalation rates in the tiles were 8.8-21 μBq m(-2) s(-1). The ranges of experimental activity concentrations and (222)Rn exhalation rates were almost identical to those of natural rocks used as typical building materials in Japan. The maximum value of effective dose to inhabitants living in houses built with the man-made tiles was 0.14 mSv y(-1), which is lower than the reference level range (1-20 mSv y(-1)) for abnormally high levels of natural background radiation published in the ICRP Publication 103. © The Author 2015. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

  12. Tile-based self-assembly of a triple-helical polysaccharide into cell wall-like mesoporous nanocapsules.

    PubMed

    Wu, Chaoxi; Wang, Xiaoying; Wang, Jianjing; Zhang, Zhen; Wang, Zhiping; Wang, Yifei; Tang, Shunqing

    2017-07-20

    Tile-based self-assembly is a robust system in the construction of three-dimensional DNA nanostructures but it has been rarely applied to other helical biopolymers. β-Glucan is an immunoactive natural polymer which exists in a triple helical conformation. Herein, we report that β-glucan, after modification using two types of short chain acyl groups, can self-assemble into tiles with inactivated sticky ends at the interface of two solvents. These tiles consist of a single layer of helices laterally aligned, and the sticky ends can be activated when a few acyl groups at the ends are removed; these tiles can further pack into mesoporous nanocapsules, in a similar process as the sticky DNA tiles pack into complex polyhedral nano-objects. These nanocapsules were found to have targeted effects to antigen presenting cells in a RAW264.7 cell model. Our study suggests that tile-based self-assembly can be a general strategy for helical biopolymers, and on fully exploiting this strategy, various new functional nanostructures will become accessible in the future.

  13. A High-Resolution Tile-Based Approach for Classifying Biological Regions in Whole-Slide Histopathological Images

    PubMed Central

    Hoffman, R.A.; Kothari, S.; Phan, J.H.; Wang, M.D.

    2016-01-01

    Computational analysis of histopathological whole slide images (WSIs) has emerged as a potential means for improving cancer diagnosis and prognosis. However, an open issue relating to the automated processing of WSIs is the identification of biological regions such as tumor, stroma, and necrotic tissue on the slide. We develop a method for classifying WSI portions (512x512-pixel tiles) into biological regions by (1) extracting a set of 461 image features from each WSI tile, (2) optimizing tile-level prediction models using nested cross-validation on a small (600 tile) manually annotated tile-level training set, and (3) validating the models against a much larger (1.7x106 tile) data set for which ground truth was available on the whole-slide level. We calculated the predicted prevalence of each tissue region and compared this prevalence to the ground truth prevalence for each image in an independent validation set. Results show significant correlation between the predicted (using automated system) and reported biological region prevalences with p < 0.001 for eight of nine cases considered. PMID:27532012

  14. A High-Resolution Tile-Based Approach for Classifying Biological Regions in Whole-Slide Histopathological Images.

    PubMed

    Hoffman, R A; Kothari, S; Phan, J H; Wang, M D

    Computational analysis of histopathological whole slide images (WSIs) has emerged as a potential means for improving cancer diagnosis and prognosis. However, an open issue relating to the automated processing of WSIs is the identification of biological regions such as tumor, stroma, and necrotic tissue on the slide. We develop a method for classifying WSI portions (512x512-pixel tiles) into biological regions by (1) extracting a set of 461 image features from each WSI tile, (2) optimizing tile-level prediction models using nested cross-validation on a small (600 tile) manually annotated tile-level training set, and (3) validating the models against a much larger (1.7x10 6 tile) data set for which ground truth was available on the whole-slide level. We calculated the predicted prevalence of each tissue region and compared this prevalence to the ground truth prevalence for each image in an independent validation set. Results show significant correlation between the predicted (using automated system) and reported biological region prevalences with p < 0.001 for eight of nine cases considered.

  15. 37. PRESSING TILES FROM PLASTER MOLDS, USING A HAND PRESS ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    37. PRESSING TILES FROM PLASTER MOLDS, USING A HAND PRESS CONSTRUCTED IN 1986. - Moravian Pottery & Tile Works, Southwest side of State Route 313 (Swamp Road), Northwest of East Court Street, Doylestown, Bucks County, PA

  16. 73. TILE WORKS FROM SOUTHEAST, c. 1920. JACOB FRANK COLLECTION ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    73. TILE WORKS FROM SOUTHEAST, c. 1920. JACOB FRANK COLLECTION (MISC 319), SL/BCHS. - Moravian Pottery & Tile Works, Southwest side of State Route 313 (Swamp Road), Northwest of East Court Street, Doylestown, Bucks County, PA

  17. INTERIOR VIEW OF BATHROOM 1. SHOWING ORIGINAL MOSAIC PATTERN TILE ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    INTERIOR VIEW OF BATHROOM 1. SHOWING ORIGINAL MOSAIC PATTERN TILE FLOOR, TILE WAINSCOT AND SHOWER SURROUND, AND CERAMIC ACCESSORIES. VIEW FACING EAST. - Hickam Field, Officers' Housing Type J, 701 Beard Street, Honolulu, Honolulu County, HI

  18. 74. TILE WORKS COURTYARD, FROM SOUTH, c. 1915. FONTHILL MANUSCRIPTS. ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    74. TILE WORKS COURTYARD, FROM SOUTH, c. 1915. FONTHILL MANUSCRIPTS. SL/SCHS. UNCATALOGED POSTCARD. - Moravian Pottery & Tile Works, Southwest side of State Route 313 (Swamp Road), Northwest of East Court Street, Doylestown, Bucks County, PA

  19. 71. TILE WORKS FROM NORTHWEST, 191215. SL/BCHS, POSTCARD SN035. ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    71. TILE WORKS FROM NORTHWEST, 1912-15. SL/BCHS, POSTCARD SN-035. - Moravian Pottery & Tile Works, Southwest side of State Route 313 (Swamp Road), Northwest of East Court Street, Doylestown, Bucks County, PA

  20. 55. QUARRY TILE CUTTERS, SECOND FLOOR, NORTH WING. WORKERS PRESSED ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    55. QUARRY TILE CUTTERS, SECOND FLOOR, NORTH WING. WORKERS PRESSED THE CUTTERS INTO SLABS OF CLAY, LIFTED THEM ONTO DRYING BOARDS AND PRESSED THE PLUNGERS TO RELEASE THE CUT TILES. REPRODUCTIONS CUTTERS ARE NOT USED IN PRODUCTION. WOODEN FORMS FOR PRODUCING CLAY SLABS WITH ROLLING PINS REST AGAINST THE WALL. - Moravian Pottery & Tile Works, Southwest side of State Route 313 (Swamp Road), Northwest of East Court Street, Doylestown, Bucks County, PA

  1. Utilization of ethyl cellulose polymer and waste materials for roofing tile production

    NASA Astrophysics Data System (ADS)

    Sam, Suubitaa Spencer; Ng, ChoonAun; Chee, Swee Yong; Habib, NoorZainab; Nadeem, Humayon; Teoh, Wei Ping

    2017-05-01

    The aim of this study was to utilize ethyl cellulose, mixture of waste engine oil and waste vegetable oil as a binder in the environmental friendly roofing tile production. The waste engine-vegetable oil wasmix together with ethyl cellulose, fly ash, coarse aggregates, fine aggregatesand a catalyst. The Fourier Transform Infrared (FTIR) analysis showed that the oil mixture added with ethyl cellulose has the relatively high binding effect due to the presence of strong carbonyl group especially after being heat cured at 1900C for 24 hours. The mixed proportion of materials with different amount of ethyl cellulose used was studied in the production of tile specimen. The results showed that the ethyl cellulose composed roofing tile specimens passed the transverse breaking strength, durability, permeabilityand the ultraviolet accelerated test. The shrinkage on the tile can be overcome by adding temperature resistance polymer on the exterior of the tile.

  2. Fracture behavior of the Space Shuttle thermal protection system

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Komine, A.; Kobayashi, A.S.

    1983-09-01

    Stable crack-growth and fracture-toughness experiments were conducted using precracked specimens machined from LI-900 reusable surface insulation (RSI) tiles of the Space Shuttle thermal protection system (TPS) at room temperature. Similar fracture experiments were conducted on fracture specimens with preexisting cracks at the interface of the tile and the strain isolation pad (SIP). Stable crack growth was not observed in the LI-900 tile fracture specimens which had a fracture toughness of 12.0 kPa sq rt of m. The intermittent subcritical crack growth at the tile-pad interface of the fracture specimens was attributed to successive local pull-outs due to tensile overload inmore » the LI-900 tile and cannot be characterized by linear elastic fracture mechanics. No subcritical interfacial crack growth was observed in the fracture specimens with densified LI-900 tiles where brittle fracture initiated at an interior point away from the densification. 11 references.« less

  3. Tiled WMS/KML Server V2

    NASA Technical Reports Server (NTRS)

    Plesea, Lucian

    2012-01-01

    This software is a higher-performance implementation of tiled WMS, with integral support for KML and time-varying data. This software is compliant with the Open Geospatial WMS standard, and supports KML natively as a WMS return type, including support for the time attribute. Regionated KML wrappers are generated that match the existing tiled WMS dataset. Ping and JPG formats are supported, and the software is implemented as an Apache 2.0 module that supports a threading execution model that is capable of supporting very high request rates. The module intercepts and responds to WMS requests that match certain patterns and returns the existing tiles. If a KML format that matches an existing pyramid and tile dataset is requested, regionated KML is generated and returned to the requesting application. In addition, KML requests that do not match the existing tile datasets generate a KML response that includes the corresponding JPG WMS request, effectively adding KML support to a backing WMS server.

  4. Terahertz NDE Application for Corrosion Detection and Evaluation under Shuttle Tiles

    NASA Technical Reports Server (NTRS)

    Anastasi, Robert F.; Madaras, Eric I.; Seebo, Jeffrey P.; Smith, Stephen W.; Lomness, Janice K.; Hintze, Paul E.; Kammerer, Catherine C.; Winfree, William P.; Russell, Richard W.

    2007-01-01

    Pulsed Terahertz NDE is being examined as a method to inspect for possible corrosion under Space Shuttle Tiles. Other methods such as ultrasonics, infrared, eddy current and microwave technologies have demonstrable shortcomings for tile NDE. This work applies Terahertz NDE, in the frequency range between 50 GHz and 1 THz, for the inspection of manufactured corrosion samples. The samples consist of induced corrosion spots that range in diameter (2.54 to 15.2 mm) and depth (0.036 to 0.787 mm) in an aluminum substrate material covered with tiles. Results of these measurements are presented for known corrosion flaws both covered and uncovered and for blind tests with unknown corrosion flaws covered with attached tiles. The Terahertz NDE system is shown to detect all artificially manufactured corrosion regions under a Shuttle tile with a depth greater than 0.13 mm.

  5. Atomic structure of a decagonal Al-Pd-Mn phase

    NASA Astrophysics Data System (ADS)

    Mihalkovič, Marek; Roth, Johannes; Trebin, Hans-Rainer

    2017-12-01

    We present a detailed structure solution for the 16 -Å decagonal quasicrystal in the Al-Pd-Mn system by means of cluster decoration and ab initio energy minimization. It is based on structure models of the ɛ and other approximant phases. The ɛ phases can be represented as subsets of a hexagon-boat-star (HBS) tiling. The decagonal phase comprises further HBS tiles. We have constructed several fictitious HBS approximants and optimized their structures individually. All tiles are decorated by two types of atomic clusters: the pseudo-Mackay icosahedron (PMI) and the large bicapped pentagonal prism (LBPP). It turns out that, whereas the PMI clusters can be kept essentially unchanged, the LBPP clusters must be adjusted in occupancy with Al atoms depending on their positions in the various tiles. In this way we obtain cluster decorations for all tiles of the decagonal quasicrystal. The calculations were confirmed by evaluation of an effective tile Hamiltonian.

  6. Advanced Modeling Strategies for the Analysis of Tile-Reinforced Composite Armor

    NASA Technical Reports Server (NTRS)

    Davila, Carlos G.; Chen, Tzi-Kang

    1999-01-01

    A detailed investigation of the deformation mechanisms in tile-reinforced armored components was conducted to develop the most efficient modeling strategies for the structural analysis of large components of the Composite Armored Vehicle. The limitations of conventional finite elements with respect to the analysis of tile-reinforced structures were examined, and two complementary optimal modeling strategies were developed. These strategies are element layering and the use of a tile-adhesive superelement. Element layering is a technique that uses stacks of shear deformable shell elements to obtain the proper transverse shear distributions through the thickness of the laminate. The tile-adhesive superelement consists of a statically condensed substructure model designed to take advantage of periodicity in tile placement patterns to eliminate numerical redundancies in the analysis. Both approaches can be used simultaneously to create unusually efficient models that accurately predict the global response by incorporating the correct local deformation mechanisms.

  7. Tony Rollins prepares a new tile for the Space Shuttle orbiter

    NASA Technical Reports Server (NTRS)

    1998-01-01

    In the Tile Fabrication Shop, Tony Rollins, with United Space Alliance, cuts a High-Temperature Reusable Surface Insulation (HRSI) tile on a gun stock contour milling machine. About 70 percent of a Space Shuttle orbiter's external surface is shielded from heat by a network of more than 24,000 tiles formed from a silica fiber compound. HRSI tiles cover the lower surface of the orbiter, areas around the forward windows, upper body flap, the base heat shield, the 'eyeballs' on the front of the Orbital Maneuvering System (OMS) pods, and the leading and trailing edges of the vertical stabilizer and the rudder speed brake. They are generally 6 inches square, but may also be as large as 12 inches square in some areas, and 1 to 5 inches thick. More advanced materials such as Flexible Insulation Blankets have replaced tiles on some upper surfaces of the orbiter.

  8. Combustion Joining of Regolith Tiles for In-Situ Fabrication of Launch/Landing Pads on the Moon and Mars

    NASA Technical Reports Server (NTRS)

    Ferguson, Robert E.; Shafirovich, Evgeny; Mantovani, James G.

    2017-01-01

    To mitigate dust problems during launch/landing operations in lunar and Mars missions, it is desired to build solid pads on the surface. Recently, strong tiles have been fabricated from lunar regolith simulants using high-temperature sintering. The present work investigates combustion joining of these tiles through the use of exothermic intermetallic reactions. Specifically, nickel/aluminum (1:1 mole ratio) mixture was placed in a gap between the tiles sintered from JSC-1A lunar regolith simulant. Upon ignition by a laser, a self-sustained propagation of the combustion front over the mixture occurred. Joining was improved with increasing the tile thickness from 6.3 mm to 12.7 mm. The temperatures sufficient for melting the glass phase of JSC-1A were recorded for 12.7-mm tiles, which explains the observed better joining.

  9. Combustion Joining of Regolith Tiles for In-Situ Fabrication of Launch/Landing Pads on the Moon and Mars

    NASA Technical Reports Server (NTRS)

    Ferguson, Robert E.; Mantovani, James G.; Shafirovich, Evgeny

    2017-01-01

    To mitigate dust problems during launch-landing operations in lunar and Mars missions, it is desired to build solid pads on the surface. Recently, strong tiles have been fabricated from lunar regolith simulants using high-temperature sintering. The present work investigates combustion joining of these tiles through the use of exothermic intermetallic reactions. Specifically, nickel aluminum (1:1 mole ratio) mixture was placed in a gap between the tiles sintered from JSC-1A lunar regolith simulant. Upon ignition by a laser, a self-sustained propagation of the combustion front over the mixture occurred. Joining was improved with increasing the tile thickness from 6.3 mm to 12.7 mm. The temperatures sufficient for melting the glass phase of JSC-1A were recorded for 12.7-mm tiles, which explains the observed better joining.

  10. Terahertz NDE application for corrosion detection and evaluation under Shuttle tiles

    NASA Astrophysics Data System (ADS)

    Anastasi, Robert F.; Madaras, Eric I.; Seebo, Jeffrey P.; Smith, Stephen W.; Lomness, Janice K.; Hintze, Paul E.; Kammerer, Catherine C.; Winfree, William P.; Russell, Richard W.

    2007-04-01

    Pulsed Terahertz NDE is being examined as a method to inspect for possible corrosion under Space Shuttle Tiles. Other methods such as ultrasonics, infrared, eddy current and microwave technologies have demonstrable shortcomings for tile NDE. This work applies Terahertz NDE, in the frequency range between 50 GHz and 1 THz, for the inspection of manufactured corrosion samples. The samples consist of induced corrosion spots that range in diameter (2.54 to 15.2 mm) and depth (0.036 to 0.787 mm) in an aluminum substrate material covered with tiles. Results of these measurements are presented for known corrosion flaws both covered and uncovered and for blind tests with unknown corrosion flaws covered with attached tiles. The Terahertz NDE system is shown to detect all artificially manufactured corrosion regions under a Shuttle tile with a depth greater than 0.13 mm.

  11. Pharmaceutical and personal care products in tile drainage following land application of municipal biosolids.

    PubMed

    Lapen, D R; Topp, E; Metcalfe, C D; Li, H; Edwards, M; Gottschall, N; Bolton, P; Curnoe, W; Payne, M; Beck, A

    2008-07-25

    Land application of municipal biosolids (sewage) is a common farming practice in many parts of the world. There is potential for transport of pharmaceuticals and personal care products (PPCPs) from agricultural fields to adjacent surface waters via tile drainage systems. In this study, liquid municipal biosolids (LMB) (total solids=11,933 mg L(-1)), supplemented with selected PPCPs and the fluorescent dye tracer rhodamine WT (RWT), were applied to tile drained fields using two land application approaches. Objectives included evaluating the relative benefits of land application practices with respect to reducing PPCP loadings to tile drains, evaluating PPCP persistence in tile water, and determining whether rhodamine WT can be used to estimate PPCP mass loads in tile. The PPCPs examined included an antibacterial agent used in personal care products (triclosan), a metabolite of nicotine (cotinine), and a variety of drugs including two sulfonamide antimicrobials (sulfapyridine, sulfamethoxazole), a beta-blocker (atenolol), an anti-epileptic (carbamazepine), an antidepressant (fluoxetine), analgesic/anti-inflammatories (acetaminophen, naproxen, ibuprofen), and a lipid-regulator (gemfibrozil). Maximum observed PPCP concentrations in the spiked LMB were about 10(3) ng g(-1) dry weight. PPCPs were shown to move rapidly via soil macropores to tile drains within minutes of the land application. Maximum observed PPCP concentrations in tile effluent associated with the LMB application-induced tile flow event were approximately 10(1) to 10(3) ng L(-1). PPCP mass loads, for the application-induced tile-hydrograph event, were significantly (p<0.1) higher for surface spreading over non-tilled soil (incorporation tillage occurring 20 h post-application), relative to aerating soil immediately prior to surface spreading using an AerWay slurry deposition system. PPCP concentrations that were detected above the limit of quantitation (LOQ) in tile water during several precipitation-induced tile flow events that occurred post-application, included: triclosan (max. approximately 1.5 x 10(2) ng L(-1)), carbamazepine (max. approximately 7 x 10(1) ng L(-1)), atenolol (max approximately 4 x 10(1) ng L(-1)), and cotinine (max approximately 2 x 10(1) ng L(-1)). In spite of their presence in biosolids, the other PPCPs were not observed above LOQ concentrations during these events. PPCP concentrations were predicted from RWT concentrations over a 40 day study period. Tile mass loads as a percent of PPCP mass applied to soil ranged from 4.2%+/-SD of 9.2% to 7.1%+/-10.9% for the AerWay system and surface spreading plus incorporation treatments, respectively.

  12. Acousto-optic signature analysis for inspection of the orbiter thermal protection tile bonds

    NASA Technical Reports Server (NTRS)

    Rodriguez, Julio G.; Tow, D. M.; Barna, B. A.

    1990-01-01

    The goal of this research is to develop a viable NDE technique for the inspection of orbiter thermal protection system (TPS) tile bonds. Phase 2, discussed here, concentrated on developing an empirical understanding of the bonded and unbonded vibration signatures of acreage tiles. Controlled experiments in the laboratory have provided useful information on the dynamic response of TPS tiles. It has been shown that several signatures are common to all the pedigree tiles. This degree of consistency in the tile-SIP (strain isolation pad) dynamic response proves that an unbond can be detected for a known tile and establish the basis for extending the analysis capability to arbitrary tiles for which there are no historical data. The field tests of the noncontacting laser acoustic sensor system, conducted at the Kennedy Space Center (KSC), investigated the vibrational environment of the Orbiter Processing Facility (OPF) and its effect on the measurement and analysis techniques being developed. The data collected showed that for orbiter locations, such as the body flap and elevon, the data analysis scheme, and/or the sensor, will require modification to accommodate the ambient motion. Several methods were identified for accomplishing this, and a solution is seen as readily achievable. It was established that the tile response was similar to that observed in the laboratory. Of most importance, however, is that the field environment will not affect the physics of the dynamic response that is related to bond condition. All of this information is fundamental to any future design and development of a prototype system.

  13. Characterization of particulate and dissolved phosphorus in tile and nearby riverine systems

    NASA Astrophysics Data System (ADS)

    Jiang, X.; Arai, Y.; David, M.; Gentry, L.

    2017-12-01

    In the Midwestern U.S., the drainage of agricultural land is predominantly managed by the tile drain system because of its poorly drain properties of clay rich indigenous soils. An accelerated subsurface flow of phosphorus (P) has recently been documented as a primary P transport path in contrast to the typical surface runoff events observed in the Eastern U.S. Recent studies suggested the important role of particulate P (PP) load in agricultural tile drainage water during high flow events. It was hypothesized that PP in the tile water is transported to riverine system contributing to the negative environmental impacts in the Midwestern U.S. In this study, correlation assessment of physicochemical properties of PP in agricultural tile drainage and nearby river samples after a storm event was conducted using a combination of 31P-nuclear magnetic resonance spectroscopy, P K-edge X-ray absorption near edge structure spectroscopy, X-ray diffraction, zetasizer, and transmission electron microscopy. Results show that significantly more colloidal (i.e. 1 nm- 2 µm) and silt-sized (i.e. > 2 µm) particles as well as higher dissolved total P (DTP) and dissolved reactive P (DRP) concentrations existed in river samples than tile samples. Tile and river samples showed similar zeta potential in each particle-size fraction and similar element distributions on colloidal fraction. However, colloidal P concentration and distribution are slightly different between tile and river samples: more colloidal total P and organic P existed in tile colloids than river colloids. The results of P speciation and mineralogical assessment will also be discussed.

  14. 72. TILE WORKS FROM SOUTH, c. 1925. JACOB FRANK COLLECTION ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    72. TILE WORKS FROM SOUTH, c. 1925. JACOB FRANK COLLECTION (MSC 319I. SL/BCHS. - Moravian Pottery & Tile Works, Southwest side of State Route 313 (Swamp Road), Northwest of East Court Street, Doylestown, Bucks County, PA

  15. 70. TILE WORKS FROM SOUTH, C. 1916. SL/BCHS, PHOTOGRAPH 8N91. ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    70. TILE WORKS FROM SOUTH, C. 1916. SL/BCHS, PHOTOGRAPH 8-N-91. - Moravian Pottery & Tile Works, Southwest side of State Route 313 (Swamp Road), Northwest of East Court Street, Doylestown, Bucks County, PA

  16. 2. MORAVIAN POTTERY AND TILE WORKS, VIEW FROM THE SOUTHWEST. ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    2. MORAVIAN POTTERY AND TILE WORKS, VIEW FROM THE SOUTHWEST. INDIAN HOUSE WING AT THE LEFT. - Moravian Pottery & Tile Works, Southwest side of State Route 313 (Swamp Road), Northwest of East Court Street, Doylestown, Bucks County, PA

  17. Boundary Layer Transition Protuberance Tests at NASA JSC Arc-Jet Facility

    NASA Technical Reports Server (NTRS)

    Larin, M. E.; Marichalar, J. J.; Kinder, G. R.; Campbell, C. H.; Riccio, J. R.; Nquyen, T. Q.; DelPapa, S. V.; Pulsonetti, M. V.

    2009-01-01

    A series of arc-jet tests in support of the Shuttle Orbiter Boundary Layer Transition flight experiment was conducted in the Channel Nozzle of the NASA Johnson Space Center Atmospheric Reentry Materials and Structures Facility. The boundary layer trip was a protrusion of a certain height and geometry fabricated as part of a 6"x6" tile insert, a special test article made of the Boeing Rigid Insulation tile material and coated with the Reaction Cured Glass used for the bottom fuselage tiles of the Space Shuttle Orbiter. A total of five such tile inserts were manufactured: four with the 0.25-in. trip height, and one with the 0.35-in. trip height. The tile inserts were interchangeably installed in the center of the 24"x24" variable configuration tile array mounted in the 24"x24" test section of the channel nozzle. The objectives of the test series were to demonstrate that the boundary layer trip can safely withstand the Space Shuttle Orbiter flight-like re-entry environments and provide temperature data on the protrusion surface, surfaces of the nearby tiles upstream and downstream of the trip, as well as the bond line between the tiles and the structure. The targeted test environments were defined for the tip of the protrusion, away from the nominal surface of the tile array. The arc jet test conditions were approximated in order to produce the levels of the free stream total enthalpy at the protrusion height similar to those expected in flight. The test articles were instrumented with surface, sidewall and bond line thermocouples. Additionally, Tempilaq temperature-indicating paint was applied to the nominal tiles of the tile array in locations not interfering with the protrusion trip. Five different grades of paint were used that disintegrate at different temperatures between 1500 and 2000 deg F. The intent of using the paint was to gauge the RCG-coated tile surface temperature, as well as determine its usefulness for a flight experiment. This paper provides an overview of the channel nozzle arc jet, test articles and test conditions, as well as the results of the arc-jet tests including the measured temperature response of the test articles, their pre- and post-test surface scans, condition of the thermal paint, and continents on the protrusion tip heating achieved in tests compared to the computational fluid dynamics predictions.

  18. eSensor: an electrochemical detection-based DNA microarray technology enabling sample-to-answer molecular diagnostics

    NASA Astrophysics Data System (ADS)

    Liu, Robin H.; Longiaru, Mathew

    2009-05-01

    DNA microarrays are becoming a widespread tool used in life science and drug screening due to its many benefits of miniaturization and integration. Microarrays permit a highly multiplexed DNA analysis. Recently, the development of new detection methods and simplified methodologies has rapidly expanded the use of microarray technologies from predominantly gene expression analysis into the arena of diagnostics. Osmetech's eSensor® is an electrochemical detection platform based on a low-to- medium density DNA hybridization array on a cost-effective printed circuit board substrate. eSensor® has been cleared by FDA for Warfarin sensitivity test and Cystic Fibrosis Carrier Detection. Other genetic-based diagnostic and infectious disease detection tests are under development. The eSensor® platform eliminates the need for an expensive laser-based optical system and fluorescent reagents. It allows one to perform hybridization and detection in a single and small instrument without any fluidic processing and handling. Furthermore, the eSensor® platform is readily adaptable to on-chip sample-to-answer genetic analyses using microfluidics technology. The eSensor® platform provides a cost-effective solution to direct sample-to-answer genetic analysis, and thus have a potential impact in the fields of point-of-care genetic analysis, environmental testing, and biological warfare agent detection.

  19. VizieR Online Data Catalog: KiDS-ESO-DR3 multi-band source catalog (de Jong+, 2017)

    NASA Astrophysics Data System (ADS)

    de Jong, J. T. A.; Verdoes Kleijn, G. A.; Erben, T.; Hildebrandt, H.; Kuijken, K.; Sikkema, G.; Brescia, M.; Bilicki, M.; Napolitano, N. R.; Amaro, V.; Begeman, K. G.; Boxhoorn, D. R.; Buddelmeijer, H.; Cavuoti, S.; Getman, F.; Grado, A.; Helmich, E.; Huang, Z.; Irisarri, N.; La Barbera, F.; Longo, G.; McFarland, J. P.; Nakajima, R.; Paolillo, M.; Puddu, E.; Radovich, M.; Rifatto, A.; Tortora, C; Valentijn, E. A.; Vellucci, C.; Vriend, W-J.; Amon, A.; Blake, C.; Choi, A.; Fenech, Conti I.; Herbonnet, R.; Heymans, C.; Hoekstra, H.; Klaes, D.; Merten, J.; Miller, L.; Schneider, P.; Viola, M.

    2017-04-01

    KiDS-ESO-DR3 contains a multi-band source catalogue encompassing all publicly released tiles, a total of 440 survey tiles including the coadded images, weight maps, masks and source lists of 292 survey tiles of KiDS-ESO-DR3, adding to the 148 tiles released previously (50 in KiDS-ESO-DR1 and 98 in KiDS-ESO-DR2). (1 data file).

  20. Tiled vector data model for the geographical features of symbolized maps.

    PubMed

    Li, Lin; Hu, Wei; Zhu, Haihong; Li, You; Zhang, Hang

    2017-01-01

    Electronic maps (E-maps) provide people with convenience in real-world space. Although web map services can display maps on screens, a more important function is their ability to access geographical features. An E-map that is based on raster tiles is inferior to vector tiles in terms of interactive ability because vector maps provide a convenient and effective method to access and manipulate web map features. However, the critical issue regarding rendering tiled vector maps is that geographical features that are rendered in the form of map symbols via vector tiles may cause visual discontinuities, such as graphic conflicts and losses of data around the borders of tiles, which likely represent the main obstacles to exploring vector map tiles on the web. This paper proposes a tiled vector data model for geographical features in symbolized maps that considers the relationships among geographical features, symbol representations and map renderings. This model presents a method to tailor geographical features in terms of map symbols and 'addition' (join) operations on the following two levels: geographical features and map features. Thus, these maps can resolve the visual discontinuity problem based on the proposed model without weakening the interactivity of vector maps. The proposed model is validated by two map data sets, and the results demonstrate that the rendered (symbolized) web maps present smooth visual continuity.

  1. Ionic composition and nitrate in drainage water from fields fertilized with different nitrogen sources, middle swamp watershed, North Carolina, August 2000-August 2001

    USGS Publications Warehouse

    Harden, Stephen L.; Spruill, Timothy B.

    2004-01-01

    A study was conducted from August 2000 to August 2001 to characterize the influence of fertilizer use from different nitrogen sources on the quality of drainage water from 11 subsurface tile drains and 7 surface field ditches in a North Carolina Coastal Plain watershed. Agricultural fields receiving commercial fertilizer (conventional sites), swine lagoon effluent (spray sites), and wastewater-treatment plant sludge (sludge site) in the Middle Swamp watershed were investigated. The ionic composition of drainage water in tile drains and ditches varied depending on fertilizer source type. The dominant ions identified in water samples from tile drains and ditches include calcium, magnesium, sodium, chloride, nitrate, and sulfate, with tile drains generally having lower pH, low or no bicarbonates, and higher nitrate and chloride concentrations. Based on fertilizer source type, median nitrate-nitrogen concentrations were significantly higher at spray sites (32.0 milligrams per liter for tiles and 8.2 milligrams per liter for ditches) relative to conventional sites (6.8 milligrams per liter for tiles and 2.7 milligrams per liter for ditches). The median instantaneous nitrate-nitrogen yields also were significantly higher at spray sites (420 grams of nitrogen per hectare per day for tile drains and 15.6 grams of nitrogen per hectare per day for ditches) relative to conventional sites (25 grams of nitrogen per hectare per day for tile drains and 8.1 grams of nitrogen per hectare per day for ditches). The tile drain site where sludge is applied had a median nitrate-nitrogen concentration of 10.5 milligrams per liter and a median instantaneous nitrate-nitrogen yield of 93 grams of nitrogen per hectare per day, which were intermediate to those of the conventional and spray tile drain sites. Results from this study indicate that nitrogen loadings and subsequent edge-of-field nitrate-nitrogen yields through tile drains and ditches were significantly higher at sites receiving applications of swine lagoon effluent compared to sites receiving commercial fertilizer.

  2. Detection of microbial communities in continuous and discontinuous membrane bioreactor using high-density oligonucleotide Microarray

    NASA Astrophysics Data System (ADS)

    Duan, Liang; Song, Yonghui; Xia, Siqing; Hermanowicz, Slawomir W.

    2010-11-01

    This study compared the whole composition of microbial communities in continuous-flow (MBR) and batch-fed (discontinuous) (MSBR) aerobic membrane bioreactors using high-density universal 16S rRNA Microarray. The array includes 506,944 probes targeted to 8935 clusters in 16S rRNA gene sequences. The Microarray results showed that both MBR and MSBR had high microbial diversity. 1126 and 1002 bacterial subfamilies were detected and can separate as 37 and 32 phyla in MBR and MSBR, respectively. Proteobacteria was the predominant phylum, 703 and 597 subfamilies were found in two systems, which constituted 62.4% and 59.6% of the whole bacteria. Gamma- and Alpha-were the dominant classes in Proteobacteria. It occupied 38.1% and 26.3%, 31.2% and 39.2% for MBR and MSBR, respectively. Bacteroidetes, Firmicutes and Actinobacteria were the subdominant groups, occupying around 9.4% and 7.6%, 6.1% and 6.5%, 6.0% and 9.0% of the total bacteria in two reactors. Some bacterial groups such as Acidobacteria, Chloroflexi, Cyanobacteria, Verrucomicrobia and Spirochaetes also found more than 15 subfamilies. All the results indicated that the MBR system had more bacteria community diversity than MSBR's. Moreover, it was very interested that MBR and MSBR had almost the same bacterial composition except Enterobacteriaceae. 63 OTUs of Enterobacteriaceae were detected in MBR, while just 10 OTUs were found in MSBR. That's one of the reasons leading to the difference of the bacterial diversity between two bioreactors.

  3. 75. TILE WORKS COURTYARD, NORTH WING ARCADE, FROM WEST, c. ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    75. TILE WORKS COURTYARD, NORTH WING ARCADE, FROM WEST, c. 1915. FONTHILL MANUSCRIPTS, SL/BCHS. UNCATALOGED POSTCARD. - Moravian Pottery & Tile Works, Southwest side of State Route 313 (Swamp Road), Northwest of East Court Street, Doylestown, Bucks County, PA

  4. 76. TILE WORKS COURTYARD, EAST WING ARCADE, FROM NORTH, c. ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    76. TILE WORKS COURTYARD, EAST WING ARCADE, FROM NORTH, c. 1915. FONTHILL MANUSCRIPTS, SL/BCHS. UNCATALOGED POSTCARD. - Moravian Pottery & Tile Works, Southwest side of State Route 313 (Swamp Road), Northwest of East Court Street, Doylestown, Bucks County, PA

  5. Ultrasonic sensor based defect detection and characterisation of ceramics.

    PubMed

    Kesharaju, Manasa; Nagarajah, Romesh; Zhang, Tonzhua; Crouch, Ian

    2014-01-01

    Ceramic tiles, used in body armour systems, are currently inspected visually offline using an X-ray technique that is both time consuming and very expensive. The aim of this research is to develop a methodology to detect, locate and classify various manufacturing defects in Reaction Sintered Silicon Carbide (RSSC) ceramic tiles, using an ultrasonic sensing technique. Defects such as free silicon, un-sintered silicon carbide material and conventional porosity are often difficult to detect using conventional X-radiography. An alternative inspection system was developed to detect defects in ceramic components using an Artificial Neural Network (ANN) based signal processing technique. The inspection methodology proposed focuses on pre-processing of signals, de-noising, wavelet decomposition, feature extraction and post-processing of the signals for classification purposes. This research contributes to developing an on-line inspection system that would be far more cost effective than present methods and, moreover, assist manufacturers in checking the location of high density areas, defects and enable real time quality control, including the implementation of accept/reject criteria. Copyright © 2013 Elsevier B.V. All rights reserved.

  6. Development of dense glass-ceramic from recycled soda-lime-silicate glass and fly ash for tiling

    NASA Astrophysics Data System (ADS)

    Mustaffar, Mohd Idham; Mahmud, Mohamad Haniza; Hassan, Mahadi Abu

    2017-12-01

    Dense glass-ceramics were prepared by sinter-crystallization process from a combination of soda-lime-silicate glass waste and fly ash. Bentonite clay that acted as a binder was also added in a prepared formulation. The powder mixture of soda-lime glass, fly ash and bentonite clay were compacted by using uniaxial hydraulic press machine and sintered at six (6) various temperatures namely 750, 800, 850, 900, 950 and 1000 °C. The heating rate and sintering time were set at 5 °C/min and 30 minutes respectively. The results revealed that modulus of rupture (MOR), density and linear shrinkage increase first from 750 to 800 °C but decrease later after 800 to 1000 °C. In the meantime, water absorption was showing completely an opposite trend. The glass-ceramic sintered at 800 °C was found to have the best combination of physical-mechanical properties and has the potential to be applied in the construction industry particularly as floor and wall tiles because of the simple manufacturing process at low temperature.

  7. Further testing and development of simulation models for UT inspections of armor

    NASA Astrophysics Data System (ADS)

    Margetan, Frank J.; Richter, Nathaniel; Thompson, R. Bruce

    2012-05-01

    In previous work we introduced an approach for simulating ultrasonic pulse/echo immersion inspections of multi-layer armor panels. Model inputs include the thickness, density, velocity and attenuation of each armor layer, the focal properties of the transducer, and a measured calibration signal. The basic model output is a response-versus-time waveform (ultrasonic A-scan) which includes echoes from all interfaces including those arising from reverberations within layers. Such A-scans can be predicted both for unflawed panels and panels containing a large disbond at any given interface. In this paper we continue our testing of the simulation software, applying it now to an armor panel consisting of SiC ceramic tiles fully embedded in a titanium-alloy matrix. An interesting specimen of such armor became available in which some tile/metal interfaces appear to be well bonded, while others have disbonded areas of various sizes. We compare measured and predicted A-scans for UT inspections, and also demonstrate an extension of the model to predict ultrasonic C-scans over regions containing a small, isolated disbond.

  8. Energy deposition and thermal effects of runaway electrons in ITER-FEAT plasma facing components

    NASA Astrophysics Data System (ADS)

    Maddaluno, G.; Maruccia, G.; Merola, M.; Rollet, S.

    2003-03-01

    The profile of energy deposited by runaway electrons (RAEs) of 10 or 50 MeV in International Thermonuclear Experimental Reactor-Fusion Energy Advanced Tokamak (ITER-FEAT) plasma facing components (PFCs) and the subsequent temperature pattern have been calculated by using the Monte Carlo code FLUKA and the finite element heat conduction code ANSYS. The RAE energy deposition density was assumed to be 50 MJ/m 2 and both 10 and 100 ms deposition times were considered. Five different configurations of PFCs were investigated: primary first wall armoured with Be, with and without protecting CFC poloidal limiters, both port limiter first wall options (Be flat tile and CFC monoblock), divertor baffle first wall, armoured with W. The analysis has outlined that for all the configurations but one (port limiter with Be flat tile) the heat sink and the cooling tube beneath the armour are well protected for both RAE energies and for both energy deposition times. On the other hand large melting (W, Be) or sublimation (C) of the surface layer occurs, eventually affecting the PFCs lifetime.

  9. Treating Fibrous Insulation to Reduce Thermal Conductivity

    NASA Technical Reports Server (NTRS)

    Zinn, Alfred; Tarkanian, Ryan

    2009-01-01

    A chemical treatment reduces the convective and radiative contributions to the effective thermal conductivity of porous fibrous thermal-insulation tile. The net effect of the treatment is to coat the surfaces of fibers with a mixture of transition-metal oxides (TMOs) without filling the pores. The TMO coats reduce the cross-sectional areas available for convection while absorbing and scattering thermal radiation in the pores, thereby rendering the tile largely opaque to thermal radiation. The treatment involves a sol-gel process: A solution containing a mixture of transition-metal-oxide-precursor salts plus a gelling agent (e.g., tetraethylorthosilicate) is partially cured, then, before it visibly gels, is used to impregnate the tile. The solution in the tile is gelled, then dried, and then the tile is fired to convert the precursor salts to the desired mixed TMO phases. The amounts of the various TMOs ultimately incorporated into the tile can be tailored via the concentrations of salts in the solution, and the impregnation depth can be tailored via the viscosity of the solution and/or the volume of the solution relative to that of the tile. The amounts of the TMOs determine the absorption and scattering spectra.

  10. Modeling the effects of tile drain placement on the hydrologic function of farmed prairie wetlands

    USGS Publications Warehouse

    Werner, Brett; Tracy, John; Johnson, W. Carter; Voldseth, Richard A.; Guntenspergen, Glenn R.; Millett, Bruce

    2016-01-01

    The early 2000s saw large increases in agricultural tile drainage in the eastern Dakotas of North America. Agricultural practices that drain wetlands directly are sometimes limited by wetland protection programs. Little is known about the impacts of tile drainage beyond the delineated boundaries of wetlands in upland catchments that may be in agricultural production. A series of experiments were conducted using the well-published model WETLANDSCAPE that revealed the potential for wetlands to have significantly shortened surface water inundation periods and lower mean depths when tile is placed in certain locations beyond the wetland boundary. Under the soil conditions found in agricultural areas of South Dakota in North America, wetland hydroperiod was found to be more sensitive to the depth that drain tile is installed relative to the bottom of the wetland basin than to distance-based setbacks. Because tile drainage can change the hydrologic conditions of wetlands, even when deployed in upland catchments, tile drainage plans should be evaluated more closely for the potential impacts they might have on the ecological services that these wetlands currently provide. Future research should investigate further how drainage impacts are affected by climate variability and change.

  11. Uneven-Layered Coding Metamaterial Tile for Ultra-wideband RCS Reduction and Diffuse Scattering.

    PubMed

    Su, Jianxun; He, Huan; Li, Zengrui; Yang, Yaoqing Lamar; Yin, Hongcheng; Wang, Junhong

    2018-05-25

    In this paper, a novel uneven-layered coding metamaterial tile is proposed for ultra-wideband radar cross section (RCS) reduction and diffuse scattering. The metamaterial tile is composed of two kinds of square ring unit cells with different layer thickness. The reflection phase difference of 180° (±37°) between two unit cells covers an ultra-wide frequency range. Due to the phase cancellation between two unit cells, the metamaterial tile has the scattering pattern of four strong lobes deviating from normal direction. The metamaterial tile and its 90-degree rotation can be encoded as the '0' and '1' elements to cover an object, and diffuse scattering pattern can be realized by optimizing phase distribution, leading to reductions of the monostatic and bi-static RCSs simultaneously. The metamaterial tile can achieve -10 dB RCS reduction from 6.2 GHz to 25.7 GHz with the ratio bandwidth of 4.15:1 at normal incidence. The measured and simulated results are in good agreement and validate the proposed uneven-layered coding metamaterial tile can greatly expanding the bandwidth for RCS reduction and diffuse scattering.

  12. Ecologically Enhancing Coastal Infrastructure

    NASA Astrophysics Data System (ADS)

    Mac Arthur, Mairi; Naylor, Larissa; Hansom, Jim; Burrows, Mike; Boyd, Ian

    2017-04-01

    Hard engineering structures continue to proliferate in the coastal zone globally in response to increasing pressures associated with rising sea levels, coastal flooding and erosion. These structures are typically plain-cast by design and function as poor ecological surrogates for natural rocky shores which are highly topographically complex and host a range of available microhabitats for intertidal species. Ecological enhancement mitigates some of these negative impacts by integrating components of nature into the construction and design of these structures to improve their sustainability, resilience and multifunctionality. In the largest UK ecological enhancement trial to date, 184 tiles (15x15cm) of up to nine potential designs were deployed on vertical concrete coastal infrastructure in 2016 at three sites across the UK (Saltcoats, Blackness and Isle of Wight). The surface texture and complexity of the tiles were varied to test the effect of settlement surface texture at the mm-cm scale of enhancement on the success of colonisation and biodiversity in the mid-upper intertidal zone in order to answer the following experimental hypotheses: • Tiles with mm-scale geomorphic complexity will have greater barnacle abundances • Tiles with cm-scale geomorphic complexity will have greater species richness than mm-scale tiles. A range of methods were used in creating the tile designs including terrestrial laser scanning of creviced rock surfaces to mimic natural rocky shore complexity as well as artificially generated complexity using computer software. The designs replicated the topographic features of high ecological importance found on natural rocky shores and promoted species recruitment and community composition on artificial surfaces; thus enabling us to evaluate biological responses to geomorphic complexity in a controlled field trial. At two of the sites, the roughest tile designs (cm scale) did not have the highest levels of barnacle recruits which were instead counted on tiles of intermediate roughness such as the grooved concrete with 257 recruits on average (n=8) at four months' post-installation (Saltcoats) and 1291 recruits at two months' post-installation (Isle of Wight). This indicates that a higher level of complexity does not always reflect the most appropriate roughness scale for some colonisers. On average, tiles with mm scale texture were more successful in terms of barnacle colonisation compared to plain-cast control tiles (n=8 per site). The poor performance of the control tiles (9 recruits, Saltcoats; 147 recruits, Isle of Wight after 4 and 2 months, respectively) further highlights that artificial, hard substrates are poor ecological surrogates for natural rocky shores. One of the sites, Blackness, was an observed outlier to the general trend of colonisation, likely due to its estuarine location. This factor may contribute to why every design, including the control tile, had high abundances of barnacles. Artificially designed tiles with cm-scale complexity had higher levels of species richness, with periwinkles and topshells frequently observed to utilise the tile microhabitats in greater numbers than found on other tile designs. These results show that the scale of geomorphic complexity influences early stage colonisation. Data analysis is being carried out between now and the EGU - these advanced analyses would be presented.

  13. METHOD FOR EVALUATING MOLD GROWTH ON CEILING TILE

    EPA Science Inventory

    A method to extract mold spores from porous ceiling tiles was developed using a masticator blender. Ceiling tiles were inoculated and analyzed using four species of mold. Statistical analysis comparing results obtained by masticator extraction and the swab method was performed. T...

  14. Compressing random microstructures via stochastic Wang tilings.

    PubMed

    Novák, Jan; Kučerová, Anna; Zeman, Jan

    2012-10-01

    This Rapid Communication presents a stochastic Wang tiling-based technique to compress or reconstruct disordered microstructures on the basis of given spatial statistics. Unlike the existing approaches based on a single unit cell, it utilizes a finite set of tiles assembled by a stochastic tiling algorithm, thereby allowing to accurately reproduce long-range orientation orders in a computationally efficient manner. Although the basic features of the method are demonstrated for a two-dimensional particulate suspension, the present framework is fully extensible to generic multidimensional media.

  15. Power Transfer Efficiency of Mutually Coupled Coils in an Aluminum AUV Hull

    DTIC Science & Technology

    2013-12-01

    the tiles are made from a nickel -zinc material, a reasonable value is 20.0.r  38 Figure 24. Photograph of the ferrite board behind the...results were then compared to three sets of measured efficiency data: an IPT system without ferrite tiles; an IPT system with the receiving coil...attached to ferrite tiles; and an IPT system with the receiving coil/ ferrite tile combination placed inside an aluminum AUV hull. Efficiency was poor, less

  16. KSC-08pd1920

    NASA Image and Video Library

    2008-07-10

    CAPE CANAVERAL, Fla. – In the Tile Shop at NASA's Kennedy Space Center, shelves are stacked with Boeing Rigid Insulation-18, or BRI-18, tiles. BRI-18 is the strongest material used for thermal insulation on the orbiters and, when coated to produce toughened unipiece fibrous insulation, provides a tile with extremely high-impact resistance. It is replacing tiles on areas of the vehicle where impact risk is high. These areas include the landing gear doors, the wing leading edge and the external tank doors. Photo credit: NASA/Jim Grossmann

  17. KSC-08pd1919

    NASA Image and Video Library

    2008-07-10

    CAPE CANAVERAL, Fla. – In the Tile Shop at NASA's Kennedy Space Center, shelves are stacked with Boeing Rigid Insulation-18, or BRI-18, tiles. BRI-18 is the strongest material used for thermal insulation on the orbiters and, when coated to produce toughened unipiece fibrous insulation, provides a tile with extremely high-impact resistance. It is replacing tiles on areas of the vehicle where impact risk is high. These areas include the landing gear doors, the wing leading edge and the external tank doors. Photo credit: NASA/Jim Grossmann

  18. An Analysis of the Selected Materials Used in Step Measurements During Pre-Fits of Thermal Protection System Tiles and the Accuracy of Measurements Made Using These Selected Materials

    NASA Technical Reports Server (NTRS)

    Kranz, David William

    2010-01-01

    The goal of this research project was be to compare and contrast the selected materials used in step measurements during pre-fits of thermal protection system tiles and to compare and contrast the accuracy of measurements made using these selected materials. The reasoning for conducting this test was to obtain a clearer understanding to which of these materials may yield the highest accuracy rate of exacting measurements in comparison to the completed tile bond. These results in turn will be presented to United Space Alliance and Boeing North America for their own analysis and determination. Aerospace structures operate under extreme thermal environments. Hot external aerothermal environments in high Mach number flights lead to high structural temperatures. The differences between tile heights from one to another are very critical during these high Mach reentries. The Space Shuttle Thermal Protection System is a very delicate and highly calculated system. The thermal tiles on the ship are measured to within an accuracy of .001 of an inch. The accuracy of these tile measurements is critical to a successful reentry of an orbiter. This is why it is necessary to find the most accurate method for measuring the height of each tile in comparison to each of the other tiles. The test results indicated that there were indeed differences in the selected materials used in step measurements during prefits of Thermal Protection System Tiles and that Bees' Wax yielded a higher rate of accuracy when compared to the baseline test. In addition, testing for experience level in accuracy yielded no evidence of difference to be found. Lastly the use of the Trammel tool over the Shim Pack yielded variable difference for those tests.

  19. Tile-Based Two-Dimensional Phase Unwrapping for Digital Holography Using a Modular Framework

    PubMed Central

    Antonopoulos, Georgios C.; Steltner, Benjamin; Heisterkamp, Alexander; Ripken, Tammo; Meyer, Heiko

    2015-01-01

    A variety of physical and biomedical imaging techniques, such as digital holography, interferometric synthetic aperture radar (InSAR), or magnetic resonance imaging (MRI) enable measurement of the phase of a physical quantity additionally to its amplitude. However, the phase can commonly only be measured modulo 2π, as a so called wrapped phase map. Phase unwrapping is the process of obtaining the underlying physical phase map from the wrapped phase. Tile-based phase unwrapping algorithms operate by first tessellating the phase map, then unwrapping individual tiles, and finally merging them to a continuous phase map. They can be implemented computationally efficiently and are robust to noise. However, they are prone to failure in the presence of phase residues or erroneous unwraps of single tiles. We tried to overcome these shortcomings by creating novel tile unwrapping and merging algorithms as well as creating a framework that allows to combine them in modular fashion. To increase the robustness of the tile unwrapping step, we implemented a model-based algorithm that makes efficient use of linear algebra to unwrap individual tiles. Furthermore, we adapted an established pixel-based unwrapping algorithm to create a quality guided tile merger. These original algorithms as well as previously existing ones were implemented in a modular phase unwrapping C++ framework. By examining different combinations of unwrapping and merging algorithms we compared our method to existing approaches. We could show that the appropriate choice of unwrapping and merging algorithms can significantly improve the unwrapped result in the presence of phase residues and noise. Beyond that, our modular framework allows for efficient design and test of new tile-based phase unwrapping algorithms. The software developed in this study is freely available. PMID:26599984

  20. Reconnecting tile drainage to riparian buffer hydrology for enhanced nitrate removal.

    PubMed

    Jaynes, D B; Isenhart, T M

    2014-03-01

    Riparian buffers are a proven practice for removing NO from overland flow and shallow groundwater. However, in landscapes with artificial subsurface (tile) drainage, most of the subsurface flow leaving fields is passed through the buffers in drainage pipes, leaving little opportunity for NO removal. We investigated the feasibility of re-routing a fraction of field tile drainage as subsurface flow through a riparian buffer for increasing NO removal. We intercepted an existing field tile outlet draining a 10.1-ha area of a row-cropped field in central Iowa and re-routed a fraction of the discharge as subsurface flow along 335 m of an existing riparian buffer. Tile drainage from the field was infiltrated through a perforated pipe installed 75 cm below the surface by maintaining a constant head in the pipe at a control box installed in-line with the existing field outlet. During 2 yr, >18,000 m (55%) of the total flow from the tile outlet was redirected as infiltration within the riparian buffer. The redirected water seeped through the 60-m-wide buffer, raising the water table approximately 35 cm. The redirected tile flow contained 228 kg of NO. On the basis of the strong decrease in NO concentrations within the shallow groundwater across the buffer, we hypothesize that the NO did not enter the stream but was removed within the buffer by plant uptake, microbial immobilization, or denitrification. Redirecting tile drainage as subsurface flow through a riparian buffer increased its NO removal benefit and is a promising management practice to improve surface water quality within tile-drained landscapes. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

  1. Tile-Based Two-Dimensional Phase Unwrapping for Digital Holography Using a Modular Framework.

    PubMed

    Antonopoulos, Georgios C; Steltner, Benjamin; Heisterkamp, Alexander; Ripken, Tammo; Meyer, Heiko

    2015-01-01

    A variety of physical and biomedical imaging techniques, such as digital holography, interferometric synthetic aperture radar (InSAR), or magnetic resonance imaging (MRI) enable measurement of the phase of a physical quantity additionally to its amplitude. However, the phase can commonly only be measured modulo 2π, as a so called wrapped phase map. Phase unwrapping is the process of obtaining the underlying physical phase map from the wrapped phase. Tile-based phase unwrapping algorithms operate by first tessellating the phase map, then unwrapping individual tiles, and finally merging them to a continuous phase map. They can be implemented computationally efficiently and are robust to noise. However, they are prone to failure in the presence of phase residues or erroneous unwraps of single tiles. We tried to overcome these shortcomings by creating novel tile unwrapping and merging algorithms as well as creating a framework that allows to combine them in modular fashion. To increase the robustness of the tile unwrapping step, we implemented a model-based algorithm that makes efficient use of linear algebra to unwrap individual tiles. Furthermore, we adapted an established pixel-based unwrapping algorithm to create a quality guided tile merger. These original algorithms as well as previously existing ones were implemented in a modular phase unwrapping C++ framework. By examining different combinations of unwrapping and merging algorithms we compared our method to existing approaches. We could show that the appropriate choice of unwrapping and merging algorithms can significantly improve the unwrapped result in the presence of phase residues and noise. Beyond that, our modular framework allows for efficient design and test of new tile-based phase unwrapping algorithms. The software developed in this study is freely available.

  2. Tile drainage phosphorus loss with long-term consistent cropping systems and fertilization.

    PubMed

    Zhang, T Q; Tan, C S; Zheng, Z M; Drury, C F

    2015-03-01

    Phosphorus (P) loss in tile drainage water may vary with agricultural practices, and the impacts are often hard to detect with short-term studies. We evaluated the effects of long-term (≥43 yr) cropping systems (continuous corn [CC], corn-oats-alfalfa-alfalfa rotation [CR], and continuous grass [CS]) and fertilization (fertilization [F] vs. no-fertilization [NF]) on P loss in tile drainage water from a clay loam soil over a 4-yr period. Compared with NF, long-term fertilization increased concentrations and losses of dissolved reactive P (DRP), dissolved unreactive P (DURP), and total P (TP) in tile drainage water, with the increments following the order: CS > CR > CC. Dissolved P (dissolved reactive P [DRP] and dissolved unreactive P [DURP]) was the dominant P form in drainage outflow, accounting for 72% of TP loss under F-CS, whereas particulate P (PP) was the major form of TP loss under F-CC (72%), F-CR (62%), NF-CS (66%), NF-CC (74%), and NF-CR (72%). Dissolved unreactive P played nearly equal roles as DRP in P losses in tile drainage water. Stepwise regression analysis showed that the concentration of P (DRP, DURP, and PP) in tile drainage flow, rather than event flow volume, was the most important factor contributing to P loss in tile drainage water, although event flow volume was more important in PP loss than in dissolved P loss. Continuous grass significantly increased P loss by increasing P concentration and flow volume of tile drainage water, especially under the fertilization treatment. Long-term grasslands may become a significant P source in tile-drained systems when they receive regular P addition. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

  3. On the Use and Validation of Mosaic Heterogeneity in Atmospheric Numerical Models

    NASA Technical Reports Server (NTRS)

    Bosilovich, Michael G.; Atlas, Robert M. (Technical Monitor)

    2001-01-01

    The mosaic land modeling approach allows for the representation of multiple surface types in a single atmospheric general circulation model grid box. Each surface type, collectively called 'tiles' correspond to different sets of surface characteristics (e.g. for grass, crop or forest). Typically, the tile space data is averaged to grid space by weighting the tiles with their fractional cover. While grid space data is routinely evaluated, little attention has been given to the tile space data. The present paper explores uses of the tile space surface data in validation with station observations. The results indicate the limitations that the mosaic heterogeneity parameterization has in reproducing variations observed between stations at the Atmospheric Radiation Measurement Southern Great Plains field site.

  4. Interference Heating to Cavities Between Simulated RSI Tiles

    NASA Technical Reports Server (NTRS)

    Johnson, C. B.

    1973-01-01

    Test results for full scale simulated surface insulation tiles on both the tunnel wall and in the free stream, for in-line and staggered tile orientations, are summarized as follows: (1) The staggered tile orientation has heating on the forward face which is a factor of 4.5 times higher than the heating to the forward face of the in-line tile orientation; (2) the longitudinal gap heating was the highest for the 0.3175 cm gap and the lowest for the 0.1587 cm gap; and (3) there was an order of magnitude decrease in the heating on the forward face of a spanwise gap when the gap size was decreased from 0.3175 cm to 0.1587 cm.

  5. Lessons learned from the development and manufacture of ceramic reusable surface insulation materials for the space shuttle orbiters

    NASA Technical Reports Server (NTRS)

    Banas, R. P.; Elgin, D. R.; Cordia, E. R.; Nickel, K. N.; Gzowski, E. R.; Aguiler, L.

    1983-01-01

    Three ceramic, reusable surface insulation materials and two borosilicate glass coatings were used in the fabrication of tiles for the Space Shuttle orbiters. Approximately 77,000 tiles were made from these materials for the first three orbiters, Columbia, Challenger, and Discovery. Lessons learned in the development, scale up to production and manufacturing phases of these materials will benefit future production of ceramic reusable surface insulation materials. Processing of raw materials into tile blanks and coating slurries; programming and machining of tiles using numerical controlled milling machines; preparing and spraying tiles with the two coatings; and controlling material shrinkage during the high temperature (2100-2275 F) coating glazing cycles are among the topics discussed.

  6. 81. MORAVIAN POTTERY AND TILE WORKS, VIEW FROM THE SOUTHWEST. ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    81. MORAVIAN POTTERY AND TILE WORKS, VIEW FROM THE SOUTHWEST. INDIAN HOUSE WING AT THE LEFT. SAME VIEW AS PA-107-2. - Moravian Pottery & Tile Works, Southwest side of State Route 313 (Swamp Road), Northwest of East Court Street, Doylestown, Bucks County, PA

  7. 80. KILN AT FIRST MORAVIAN POTTERY AND TILE WORKS AT ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    80. KILN AT FIRST MORAVIAN POTTERY AND TILE WORKS AT ALDIE, 1901. PHOTOGRAPH PUBLISHED IN HOUSE AND GARDEN. AUGUST 1901, p. 19. - Moravian Pottery & Tile Works, Southwest side of State Route 313 (Swamp Road), Northwest of East Court Street, Doylestown, Bucks County, PA

  8. A landsat data tiling and compositing approach optimized for change detection in the conterminous United States

    USGS Publications Warehouse

    Nelson, Kurtis; Steinwand, Daniel R.

    2015-01-01

    Annual disturbance maps are produced by the LANDFIRE program across the conterminous United States (CONUS). Existing LANDFIRE disturbance data from 1999 to 2010 are available and current efforts will produce disturbance data through 2012. A tiling and compositing approach was developed to produce bi-annual images optimized for change detection. A tiled grid of 10,000 × 10,000 30 m pixels was defined for CONUS and adjusted to consolidate smaller tiles along national borders, resulting in 98 non-overlapping tiles. Data from Landsat-5,-7, and -8 were re-projected to the tile extents, masked to remove clouds, shadows, water, and snow/ice, then composited using a cosine similarity approach. The resultant images were used in a change detection algorithm to determine areas of vegetation change. This approach enabled more efficient processing compared to using single Landsat scenes, by taking advantage of overlap between adjacent paths, and allowed an automated system to be developed for the entire process.

  9. KENNEDY SPACE CENTER, FLA. - In the Orbiter Processing Facility, KSC employee Chris Moore repairs tile on the forward area of the orbiter Discovery. The vehicle has undergone Orbiter Major Modifications in the past year, which includes tile check and repair. The tiles are part of the Orbiter Thermal Protection System, thermal shields to protect against temperatures as high as 3,000° Fahrenheit, which are produced during descent for landing. Discovery is scheduled to fly on mission STS-121 to the International Space Station.

    NASA Image and Video Library

    2003-12-09

    KENNEDY SPACE CENTER, FLA. - In the Orbiter Processing Facility, KSC employee Chris Moore repairs tile on the forward area of the orbiter Discovery. The vehicle has undergone Orbiter Major Modifications in the past year, which includes tile check and repair. The tiles are part of the Orbiter Thermal Protection System, thermal shields to protect against temperatures as high as 3,000° Fahrenheit, which are produced during descent for landing. Discovery is scheduled to fly on mission STS-121 to the International Space Station.

  10. Structure of the Jovian Magnetodisk Current Sheet: Initial Galileo Observations

    NASA Technical Reports Server (NTRS)

    Russell, C. T.; Huddleston, D. E.; Khurana, K. K.; Kivelson, M. G.

    2001-01-01

    The ten-degree tilt of the Jovian magnetic dipole causes the magnetic equator to move back and forth across Jupiter's rotational equator and tile Galileo orbit that lies therein. Beyond about 24 Jovian radii, the equatorial current sheet thins and tile magnetic structure changes from quasi-dipolar into magnetodisk-like with two regions of nearly radial but antiparallel magnetic field separated by a strong current layer. The magnetic field at the center of the current sheet is very weak in this region. Herein we examine tile current sheet at radial distances from 24 55 Jovian radii. We find that the magnetic structure very much resembles tile structure seen at planetary magnetopause and tail current sheet crossings. Tile magnetic field variation is mainly linear with little rotation of the field direction, At times there is almost no small-scale structure present and the normal component of the magnetic field is almost constant through the current sheet. At other times there are strong small-scale structures present in both the southward and northward directions. This small-scale structure appears to grow with radial distance and may provide the seeds for tile explosive reconnection observed at even greater radial distances oil tile nightside. Beyond about 40 Jovian radii, the thin current sheet also appears to be almost constantly in oscillatory motion with periods of about 10 min. The amplitude of these oscillations also appears to grow with radial distance. The source of these fluctuations may be dynamical events in tile more distant magnetodisk.

  11. Characterization of an Ionization Readout Tile for nEXO

    DOE PAGES

    Jewell, M.; Schubert, A.; Cen, W. R.; ...

    2018-01-10

    Here, a new design for the anode of a time projection chamber, consisting of a charge-detecting "tile", is investigated for use in large scale liquid xenon detectors. The tile is produced by depositing 60 orthogonal metal charge-collecting strips, 3 mm wide, on a 10 cm × 10 cm fused-silica wafer. These charge tiles may be employed by large detectors, such as the proposed tonne-scale nEXO experiment to search for neutrinoless double-beta decay. Modular by design, an array of tiles can cover a sizable area. The width of each strip is small compared to the size of the tile, so amore » Frisch grid is not required. A grid-less, tiled anode design is beneficial for an experiment such as nEXO, where a wire tensioning support structure and Frisch grid might contribute radioactive backgrounds and would have to be designed to accommodate cycling to cryogenic temperatures. The segmented anode also reduces some degeneracies in signal reconstruction that arise in large-area crossed-wire time projection chambers. A prototype tile was tested in a cell containing liquid xenon. Very good agreement is achieved between the measured ionization spectrum of a 207Bi source and simulations that include the microphysics of recombination in xenon and a detailed modeling of the electrostatic field of the detector. An energy resolution σ/ E=5.5% is observed at 570 keV, comparable to the best intrinsic ionization-only resolution reported in literature for liquid xenon at 936 V/cm.« less

  12. Experimental Design for the Evaluation of Detection Techniques of Hidden Corrosion Beneath the Thermal Protective System of the Space Shuttle Orbiter

    NASA Technical Reports Server (NTRS)

    Kemmerer, Catherine C.; Jacoby, Joseph A.; Lomness, Janice K.; Hintze, Paul E.; Russell, Richard W.

    2007-01-01

    The detection of corrosion beneath Space Shuttle Orbiter thermal protective system is traditionally accomplished by removing the Reusable Surface Insulation tiles and performing a visual inspection of the aluminum substrate and corrosion protection system. This process is time consuming and has the potential to damage high cost tiles. To evaluate non-intrusive NDE methods, a Proof of Concept (PoC) experiment was designed and test panels were manufactured. The objective of the test plan was three-fold: establish the ability to detect corrosion hidden from view by tiles; determine the key factor affecting detectability; roughly quantify the detection threshold. The plan consisted of artificially inducing dimensionally controlled corrosion spots in two panels and rebonding tile over the spots to model the thermal protective system of the orbiter. The corrosion spot diameter ranged from 0.100" to 0.600" inches and the depth ranged from 0.003" to 0.020". One panel consisted of a complete factorial array of corrosion spots with and without tile coverage. The second panel consisted of randomized factorial points replicated and hidden by tile. Conventional methods such as ultrasonics, infrared, eddy current and microwave methods have shortcomings. Ultrasonics and IR cannot sufficiently penetrate the tiles, while eddy current and microwaves have inadequate resolution. As such, the panels were interrogated using Backscatter Radiography and Terahertz Imaging. The terahertz system successfully detected artificially induced corrosion spots under orbiter tile and functional testing is in-work in preparation for implementation.

  13. Characterization of an Ionization Readout Tile for nEXO

    NASA Astrophysics Data System (ADS)

    Jewell, M.; Schubert, A.; Cen, W. R.; Dalmasson, J.; DeVoe, R.; Fabris, L.; Gratta, G.; Jamil, A.; Li, G.; Odian, A.; Patel, M.; Pocar, A.; Qiu, D.; Wang, Q.; Wen, L. J.; Albert, J. B.; Anton, G.; Arnquist, I. J.; Badhrees, I.; Barbeau, P.; Beck, D.; Belov, V.; Bourque, F.; Brodsky, J. P.; Brown, E.; Brunner, T.; Burenkov, A.; Cao, G. F.; Cao, L.; Chambers, C.; Charlebois, S. A.; Chiu, M.; Cleveland, B.; Coon, M.; Craycraft, A.; Cree, W.; Côté, M.; Daniels, T.; Daugherty, S. J.; Daughhetee, J.; Delaquis, S.; Der Mesrobian-Kabakian, A.; Didberidze, T.; Dilling, J.; Ding, Y. Y.; Dolinski, M. J.; Dragone, A.; Fairbank, W.; Farine, J.; Feyzbakhsh, S.; Fontaine, R.; Fudenberg, D.; Giacomini, G.; Gornea, R.; Hansen, E. V.; Harris, D.; Hasan, M.; Heffner, M.; Hoppe, E. W.; House, A.; Hufschmidt, P.; Hughes, M.; Hößl, J.; Ito, Y.; Iverson, A.; Jiang, X. S.; Johnston, S.; Karelin, A.; Kaufman, L. J.; Koffas, T.; Kravitz, S.; Krücken, R.; Kuchenkov, A.; Kumar, K. S.; Lan, Y.; Leonard, D. S.; Li, S.; Li, Z.; Licciardi, C.; Lin, Y. H.; MacLellan, R.; Michel, T.; Mong, B.; Moore, D.; Murray, K.; Newby, R. J.; Ning, Z.; Njoya, O.; Nolet, F.; Odgers, K.; Oriunno, M.; Orrell, J. L.; Ostrovskiy, I.; Overman, C. T.; Ortega, G. S.; Parent, S.; Piepke, A.; Pratte, J.-F.; Radeka, V.; Raguzin, E.; Rao, T.; Rescia, S.; Retiere, F.; Robinson, A.; Rossignol, T.; Rowson, P. C.; Roy, N.; Saldanha, R.; Sangiorgio, S.; Schmidt, S.; Schneider, J.; Sinclair, D.; Skarpaas, K.; Soma, A. K.; St-Hilaire, G.; Stekhanov, V.; Stiegler, T.; Sun, X. L.; Tarka, M.; Todd, J.; Tolba, T.; Tsang, R.; Tsang, T.; Vachon, F.; Veeraraghavan, V.; Visser, G.; Vuilleumier, J.-L.; Wagenpfeil, M.; Weber, M.; Wei, W.; Wichoski, U.; Wrede, G.; Wu, S. X.; Wu, W. H.; Yang, L.; Yen, Y.-R.; Zeldovich, O.; Zhang, X.; Zhao, J.; Zhou, Y.; Ziegler, T.

    2018-01-01

    A new design for the anode of a time projection chamber, consisting of a charge-detecting "tile", is investigated for use in large scale liquid xenon detectors. The tile is produced by depositing 60 orthogonal metal charge-collecting strips, 3 mm wide, on a 10 cm × 10 cm fused-silica wafer. These charge tiles may be employed by large detectors, such as the proposed tonne-scale nEXO experiment to search for neutrinoless double-beta decay. Modular by design, an array of tiles can cover a sizable area. The width of each strip is small compared to the size of the tile, so a Frisch grid is not required. A grid-less, tiled anode design is beneficial for an experiment such as nEXO, where a wire tensioning support structure and Frisch grid might contribute radioactive backgrounds and would have to be designed to accommodate cycling to cryogenic temperatures. The segmented anode also reduces some degeneracies in signal reconstruction that arise in large-area crossed-wire time projection chambers. A prototype tile was tested in a cell containing liquid xenon. Very good agreement is achieved between the measured ionization spectrum of a 207Bi source and simulations that include the microphysics of recombination in xenon and a detailed modeling of the electrostatic field of the detector. An energy resolution σ/E=5.5% is observed at 570 keV, comparable to the best intrinsic ionization-only resolution reported in literature for liquid xenon at 936 V/cm.

  14. Comprehensive nitrogen budgets for controlled tile drainage fields in eastern ontario, Canada.

    PubMed

    Sunohara, M D; Craiovan, E; Topp, E; Gottschall, N; Drury, C F; Lapen, D R

    2014-03-01

    Excessive N loading from subsurface tile drainage has been linked to water quality degradation. Controlled tile drainage (CTD) has the potential to reduce N losses via tile drainage and boost crop yields. While CTD can reduce N loss from tile drainage, it may increase losses through other pathways. A multiple-year field-scale accounting of major N inputs and outputs during the cropping season was conducted on freely drained and controlled tile drained agricultural fields under corn ( L.)-soybean [ (L.) Merr.] production systems in eastern Ontario, Canada. Greater predicted gaseous N emissions for corn and soybean and greater observed lateral seepage N losses were observed for corn and soybean fields under CTD relative to free-draining fields. However, observed N losses from tile were significantly lower for CTD fields, in relation to freely drained fields. Changes in residual soil N were essentially equivalent between drainage treatments, while mass balance residual terms were systematically negative (slightly more so for CTD). Increases in plant N uptake associated with CTD were observed, probably resulting in higher grain yields for corn and soybean. This study illustrates the benefits of CTD in decreasing subsurface tile drainage N losses and boosting crop yields, while demonstrating the potential for CTD to increase N losses via other pathways related to gaseous emissions and groundwater seepage. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

  15. Quantitative real-time PCR-based assessment of tile drainage management influences on bacterial pathogens in tile drainage and groundwater.

    PubMed

    Liu, Linda; Cloutier, Michel; Craiovan, Emilia; Edwards, Mark; Frey, Steven K; Gottschall, Natalie; Lapen, David R; Sunohara, Mark; Topp, Edward; Khan, Izhar U H

    2018-05-15

    This study compared the impact of controlled tile drainage (CD) and freely draining (FD) systems on the prevalence and quantitative real-time PCR-based enumeration of four major pathogens including Arcobacter butzleri, Campylobacter jejuni, Campylobacter coli, and Helicobacter pylori in tile- and groundwater following a fall liquid swine manure (LSM) application on clay loam field plots. Although the prevalence of all target pathogens were detected in CD and FD systems, the loads of A. butzleri, C. jejuni, and C. coli were significantly lower in CD tile-water (p<0.05), in relation to FD tile-water. However, concentrations of A. butzleri were significantly greater in CD than FD tile-water (p<0.05). In shallow groundwater (1.2m depth), concentrations of A. butzleri, C. coli, and H. pylori showed no significant difference between CD and FD plots, while C. jejuni concentrations were significantly higher in FD plots (p<0.05). No impact of CD on the H. pylori was observed since quantitative detection in tile- and groundwater was scarce. Although speculative, H. pylori occurrence may have been related to the application of municipal biosolids four years prior to the LSM experiment. Overall, CD can be used to help minimize off-field export of pathogens into surface waters following manure applications to land, thereby reducing waterborne pathogen exposure risks to humans. Crown Copyright © 2017. Published by Elsevier B.V. All rights reserved.

  16. Reducing phosphorus loss in tile water with managed drainage in a claypan soil.

    PubMed

    Nash, Patrick R; Nelson, Kelly A; Motavalli, Peter P; Nathan, Manjula; Dudenhoeffer, Chris

    2015-03-01

    Installing subsurface tile drain systems in poorly drained claypan soils to improve corn ( L.) yields could potentially increase environmental phosphorus (P) loss through the tile drainage system. The objectives of the study were to quantify the average concentration and loss of ortho-P in tile drain water from a claypan soil and to determine whether managed subsurface drainage (MD) could reduce ortho-P loss in tile water compared with free subsurface drainage (FD). Flow-weighted ortho-P concentration in the tile water was significantly lower with MD (0.09 mg L) compared with that of FD (0.15 mg L). Ortho-P loss in the tile water of this study was reduced with MD (36 g ha) by 80% compared with FD (180 g ha). Contrary to previous research, reduced ortho-P loss observed over the 4-yr study was not solely due to the reduced amount of water drained annually (63%) with MD compared with FD. During the spring period, when flow was similar between MD and FD, the concentration of ortho-P in the tile water generally was lower with MD compared with FD, which resulted in significantly less ortho-P loss with MD. We speculate that MD's ability to conserve water during the dry summer months increased corn's uptake of water and P, which reduced the amount of P available for leaching loss in the subsequent springs. Copyright © by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America, Inc.

  17. Characterization of an Ionization Readout Tile for nEXO

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Jewell, M.; Schubert, A.; Cen, W. R.

    Here, a new design for the anode of a time projection chamber, consisting of a charge-detecting "tile", is investigated for use in large scale liquid xenon detectors. The tile is produced by depositing 60 orthogonal metal charge-collecting strips, 3 mm wide, on a 10 cm × 10 cm fused-silica wafer. These charge tiles may be employed by large detectors, such as the proposed tonne-scale nEXO experiment to search for neutrinoless double-beta decay. Modular by design, an array of tiles can cover a sizable area. The width of each strip is small compared to the size of the tile, so amore » Frisch grid is not required. A grid-less, tiled anode design is beneficial for an experiment such as nEXO, where a wire tensioning support structure and Frisch grid might contribute radioactive backgrounds and would have to be designed to accommodate cycling to cryogenic temperatures. The segmented anode also reduces some degeneracies in signal reconstruction that arise in large-area crossed-wire time projection chambers. A prototype tile was tested in a cell containing liquid xenon. Very good agreement is achieved between the measured ionization spectrum of a 207Bi source and simulations that include the microphysics of recombination in xenon and a detailed modeling of the electrostatic field of the detector. An energy resolution σ/ E=5.5% is observed at 570 keV, comparable to the best intrinsic ionization-only resolution reported in literature for liquid xenon at 936 V/cm.« less

  18. Massively multiplexed microbial identification using resequencing DNA microarrays for outbreak investigation

    NASA Astrophysics Data System (ADS)

    Leski, T. A.; Ansumana, R.; Jimmy, D. H.; Bangura, U.; Malanoski, A. P.; Lin, B.; Stenger, D. A.

    2011-06-01

    Multiplexed microbial diagnostic assays are a promising method for detection and identification of pathogens causing syndromes characterized by nonspecific symptoms in which traditional differential diagnosis is difficult. Also such assays can play an important role in outbreak investigations and environmental screening for intentional or accidental release of biothreat agents, which requires simultaneous testing for hundreds of potential pathogens. The resequencing pathogen microarray (RPM) is an emerging technological platform, relying on a combination of massively multiplex PCR and high-density DNA microarrays for rapid detection and high-resolution identification of hundreds of infectious agents simultaneously. The RPM diagnostic system was deployed in Sierra Leone, West Africa in collaboration with Njala University and Mercy Hospital Research Laboratory located in Bo. We used the RPM-Flu microarray designed for broad-range detection of human respiratory pathogens, to investigate a suspected outbreak of avian influenza in a number of poultry farms in which significant mortality of chickens was observed. The microarray results were additionally confirmed by influenza specific real-time PCR. The results of the study excluded the possibility that the outbreak was caused by influenza, but implicated Klebsiella pneumoniae as a possible pathogen. The outcome of this feasibility study confirms that application of broad-spectrum detection platforms for outbreak investigation in low-resource locations is possible and allows for rapid discovery of the responsible agents, even in cases when different agents are suspected. This strategy enables quick and cost effective detection of low probability events such as outbreak of a rare disease or intentional release of a biothreat agent.

  19. 69. TILE WORKS UNDER CONSTRUCTION, 1912. SOURCE: FONTHILL MANUSCRIPT COLLECTION, ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    69. TILE WORKS UNDER CONSTRUCTION, 1912. SOURCE: FONTHILL MANUSCRIPT COLLECTION, SPRUANCE LIBRARY, BUCKS COUNTY HISTORICAL SOCIETY (HEREAFTER SL/BCHS), UNCATALOGED GLASS PLATE NEGATIVE. - Moravian Pottery & Tile Works, Southwest side of State Route 313 (Swamp Road), Northwest of East Court Street, Doylestown, Bucks County, PA

  20. Pinwheel Prints.

    ERIC Educational Resources Information Center

    Derby, Marie

    1998-01-01

    Presents a printmaking project that enables students to work with lines and shapes by having them create tile designs on Scratch-Foam Board. Explains that the shape of the combined four tiles should be a pinwheel while the design on one corner of each tile should connect forming a design within itself. (CMK)

  1. The Sad Case of the Columbine Tiles.

    ERIC Educational Resources Information Center

    Dowling-Sendor, Benjamin

    2003-01-01

    Analyzes free-speech challenge to school district's guidelines for acceptable expressions on ceramic tiles painted by Columbine High School students to express their feelings about the massacre. Tenth Circuit found that tile painting constituted school-sponsored speech and thus district had the constitutional authority under "Hazelwood School…

  2. Sensitive genotyping of foodborne-associated human noroviruses and hepatitis A virus using an array-based platform

    USDA-ARS?s Scientific Manuscript database

    The viral pathogens, human norovirus (NoV) and hepatitis A virus (HAV), are significant contributors of foodborne associated outbreaks. To develop a typing tool for foodborne viruses, a focused, low-density DNA microarray was developed in conjunction with a rapid and high-throughput fluorescent meth...

  3. Development of a DNA microarray to detect antimicrobial resistance genes identified in the national center for biotechnology information database

    USDA-ARS?s Scientific Manuscript database

    High density genotyping techniques are needed for investigating antimicrobial resistance especially in the case of multi-drug resistant (MDR) isolates. To achieve this all antimicrobial resistance genes in the NCBI Genbank database were identified by key word searches of sequence annotations and the...

  4. Reusable Thermal Barrier for Insulation Gaps

    NASA Technical Reports Server (NTRS)

    Saladee, C. E.

    1985-01-01

    Filler composed of resilient, heat-resistant materials. Thermal barrier nestles snugly in gap between two tiles with minimal protrusion beyond faces of surrounding tiles. When removed from gap, barrier springs back to nearly original shape. Developed for filling spaces between tiles on Space Shuttle, also used in furnaces and kilns.

  5. Drainage water management effects on tile discharge and water quality

    USDA-ARS?s Scientific Manuscript database

    Nitrogen (N) fluxes from tile drained watersheds have been implicated in water quality studies of the Mississippi River Basin, but the contribution of tile drains to N export in headwater watersheds is not well understood. The objective of this study was to ascertain seasonal and annual contribution...

  6. 7 CFR 3201.81 - Floor coverings (non-carpet).

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ..., that are designed for use as the top layer on a floor. Examples are bamboo, hardwood, and cork tiles...—floor tiles. USDA is requesting that manufacturers of these qualifying biobased products provide... floor tile products and which product should be afforded the preference in purchasing. Note to paragraph...

  7. 7 CFR 3201.81 - Floor coverings (non-carpet).

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ..., that are designed for use as the top layer on a floor. Examples are bamboo, hardwood, and cork tiles...—floor tiles. USDA is requesting that manufacturers of these qualifying biobased products provide... floor tile products and which product should be afforded the preference in purchasing. Note to paragraph...

  8. KSC-08pd1963

    NASA Image and Video Library

    2008-07-14

    CAPE CANAVERAL, Fla. – In the tile shop at NASA's Kennedy Space Center, a worker holds one of the Boeing Replacement Insulation 18, or BRI-18, tiles being prepared for installation on space shuttles. BRI-18 is the strongest material used for thermal insulation on the orbiters and, when coated to produce toughened unipiece fibrous insulation, provides a tile with extremely high-impact resistance. It is replacing other tiles on areas of the vehicle where impact risk is high, such as the landing gear doors, the wing leading edge and the external tank doors. Photo credit: NASA/Jim Grossmann

  9. KSC-08pd1929

    NASA Image and Video Library

    2008-07-10

    CAPE CANAVERAL, Fla. – In the tile shop at NASA's Kennedy Space Center, United Space Alliance technician Damon Petty appies a TUFI coating to Boeing Rigid Insulation-18, or BRI-18, tile. BRI-18 is the strongest material used for thermal insulation on the orbiters and, when coated to produce toughened unipiece fibrous insulation, provides a tile with extremely high-impact resistance. It is replacing other tiles on areas of the vehicle where impact risk is high, such as the landing gear doors, the wing leading edge and the external tank doors. Photo credit: NASA/Jim Grossmann

  10. 57. ORIGINAL TILE PRESS AND EXPERIMENTAL DENTAL KILN, SECOND FLOOR, ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    57. ORIGINAL TILE PRESS AND EXPERIMENTAL DENTAL KILN, SECOND FLOOR, NORTH WING, HENRY MERCER USED THE KILN FOR HIS EARLIEST GLAZE TESTS. THE PRESS WAS DESIGNED TO BE USED WITH METAL CASED MOLDS. SINCE ONLY THE EARLIEST TILE DESIGNS ARE IN METAL CASES. THIS TECHNIQUE WAS PROBABLY DISCONTINUED. THIS PRESS WAS, THEREFORE, PROBABLY NOT USED EXTENSIVELY AT THIS SITE. THE UPPER PART OF GLAZE KILN No. 2 IS AT THE LEFT REAR. - Moravian Pottery & Tile Works, Southwest side of State Route 313 (Swamp Road), Northwest of East Court Street, Doylestown, Bucks County, PA

  11. Gas-fired radiant heater

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Rattner, D.

    1987-01-06

    A heater apparatus is described comprising a plurality of porous tile members arranged in an elongated series; fuel distribution means adapted to support the tile members and having a baffled compartmentalized chamber transversely integrally formed therein for delivering a predetermined ignitable fuel mixture evenly to the tile members; and air circulation means adapted to substantially encase the fuel distribution means for circulating cooling air thereabout. The air circulation means is formed to provide an elongated and deflected air gap along opposite edges thereof to direct vented air away from the tile members.

  12. Some space shuttle tile/strain-isolator-pad sinusoidal vibration tests

    NASA Technical Reports Server (NTRS)

    Miserentino, R.; Pinson, L. D.; Leadbetter, S. A.

    1980-01-01

    Vibration tests were performed on the tile/strain-isolator-pad system used as thermal protection for the space shuttle orbiter. Experimental data on normal and in-plane vibration response and damping properties are presented. Three test specimens exhibited shear type motion during failures that occurred in the tile near the tile/strain-isolator-pad bond-line. A dynamic instability is described which has large in-plane motion at a frequency one-half that of the nominal driving frequency. Analysis shows that this phenomenon is a parametric response.

  13. KSC-08pd1926

    NASA Image and Video Library

    2008-07-10

    CAPE CANAVERAL, Fla. – In the Tile Shop at NASA's Kennedy Space Center, a United Space Alliance technician checks the Boeing Rigid Insulation-18, or BRI-18, tile he cut. BRI-18 is the strongest material used for thermal insulation on the orbiters and, when coated to produce toughened unipiece fibrous insulation, provides a tile with extremely high-impact resistance. It is replacing tiles on areas of the vehicle where impact risk is high. These areas include the landing gear doors, the wing leading edge and the external tank doors. Photo credit: NASA/Jim Grossmann

  14. Aerogel: Tile Composites Toughen a Brittle Superinsulation

    NASA Technical Reports Server (NTRS)

    White, Susan; Rasky, Daniel; Arnold, James O. (Technical Monitor)

    1998-01-01

    Pure aerogels, though familiar in the laboratory for decades as exotic lightweight insulators with unusual physical properties, have had limited industrial applications due to their low strength and high brittleness. Composites formed of aerogels and the ceramic fiber matrices like those used as space shuttle tiles bypass the fragility of pure aerogels and can enhance the performance of space shuttle tiles in their harsh operating environment. Using a layer of aerogel embedded in a tile may open up a wide range of applications where thermal insulation, gas convection control and mechanical strength matter.

  15. KENNEDY SPACE CENTER, FLA. - This view shows the tiles below the windshield on the orbiter Atlantis. A gap test is being performed on the tiles as part of return-to-flight activities. Atlantis is scheduled for mission STS-114, a return-to-flight test mission to the International Space Station.

    NASA Image and Video Library

    2003-11-20

    KENNEDY SPACE CENTER, FLA. - This view shows the tiles below the windshield on the orbiter Atlantis. A gap test is being performed on the tiles as part of return-to-flight activities. Atlantis is scheduled for mission STS-114, a return-to-flight test mission to the International Space Station.

  16. KSC-08pd1927

    NASA Image and Video Library

    2008-07-10

    CAPE CANAVERAL, Fla. – In the Tile Shop at NASA's Kennedy Space Center, a United Space Alliance technician checks a Boeing Rigid Insulation-18, or BRI-18, tile. BRI-18 is the strongest material used for thermal insulation on the orbiters and, when coated to produce toughened unipiece fibrous insulation, provides a tile with extremely high-impact resistance. It is replacing tiles on areas of the vehicle where impact risk is high. These areas include the landing gear doors, the wing leading edge and the external tank doors. Photo credit: NASA/Jim Grossmann

  17. KSC-08pd1922

    NASA Image and Video Library

    2008-07-10

    CAPE CANAVERAL, Fla. – In the Tile Shop at NASA's Kennedy Space Center, Boeing Rigid Insulation-18, or BRI-18, tiles of different shapes await use on the three orbiters: Discovery, Atlantis and Endeavour. BRI-18 is the strongest material used for thermal insulation on the orbiters and, when coated to produce toughened unipiece fibrous insulation, provides a tile with extremely high-impact resistance. It is replacing tiles on areas of the vehicle where impact risk is high. These areas include the landing gear doors, the wing leading edge and the external tank doors. Photo credit: NASA/Jim Grossmann

  18. KSC-08pd1924

    NASA Image and Video Library

    2008-07-10

    CAPE CANAVERAL, Fla. – In the Tile Shop at NASA's Kennedy Space Center, a United Space Alliance technician trims a block of Boeing Rigid Insulation-18, or BRI-18, tile. BRI-18 is the strongest material used for thermal insulation on the orbiters and, when coated to produce toughened unipiece fibrous insulation, provides a tile with extremely high-impact resistance. It is replacing tiles on areas of the vehicle where impact risk is high. These areas include the landing gear doors, the wing leading edge and the external tank doors. Photo credit: NASA/Jim Grossmann

  19. KSC-08pd1925

    NASA Image and Video Library

    2008-07-10

    CAPE CANAVERAL, Fla. – In the Tile Shop at NASA's Kennedy Space Center, a United Space Alliance technician checks the shape of Boeing Rigid Insulation-18, or BRI-18, tile he cut. BRI-18 is the strongest material used for thermal insulation on the orbiters and, when coated to produce toughened unipiece fibrous insulation, provides a tile with extremely high-impact resistance. It is replacing tiles on areas of the vehicle where impact risk is high. These areas include the landing gear doors, the wing leading edge and the external tank doors. Photo credit: NASA/Jim Grossmann

  20. Banks of lights dry tiles on Atlantis

    NASA Technical Reports Server (NTRS)

    2001-01-01

    KENNEDY SPACE CENTER, Fla. -- In the Orbiter Processing Facility, a worker points to some of the tiles on orbiter Atlantis that are being dried by clusters of 200-300 watt heat lamps. Significant rainstorms during the orbiter'''s turnaround for a ferry flight home from Edwards Air Force Base, Calif., caused a moisture problem. The tiles are part of the Thermal Protection System used on orbiters for extreme temperatures encountered during landing. Engineers are evaluating the current procedures to assure the tiles are in a safe and flight-ready condition.

  1. KSC-08pd1923

    NASA Image and Video Library

    2008-07-10

    CAPE CANAVERAL, Fla. – In the Tile Shop at NASA's Kennedy Space Center, a United Space Alliance technician cuts a block of Boeing Rigid Insulation-18, or BRI-18, tile. BRI-18 is the strongest material used for thermal insulation on the orbiters and, when coated to produce toughened unipiece fibrous insulation, provides a tile with extremely high-impact resistance. It is replacing tiles on areas of the vehicle where impact risk is high. These areas include the landing gear doors, the wing leading edge and the external tank doors. Photo credit: NASA/Jim Grossmann

  2. Aerogel: Tile Composites Toughen a Brittle Superinsulation

    NASA Technical Reports Server (NTRS)

    White, Susan; Rasky, Daniel; Arnold, James O. (Technical Monitor)

    1998-01-01

    Pure aerogels, though familiar in the laboratory for decades as exotic lightweight insulators with unusual physical properties, have had limited industrial applications due to their low strength and high brittleness. Composites formed of aerogels and the ceramic fiber matrices used as space shuttle tiles bypass the fragility of pure aerogels and can enhance the performance of space shuttle tiles in their harsh operating environment. Using a layer of aerogel embedded in a tile may open up a wide range of applications where thermal insulation, gas convection control and mechanical strength matter.

  3. Remotely replaceable tokamak plasma limiter tiles

    DOEpatents

    Gallix, R.

    1987-12-09

    U-shaped tiles placed end-to-end over a pair of parallel runners have two rods which engage L-shaped slots. A sliding bar between the runners has grooves with clips to retain the rods pressed into receiving legs of the L-shaped slots in the runners. Sliding the bar in the direction of retaining legs of the L-shaped slots latches the tiles in place over the wall. Resilient contact strips under the parallel sides of the U-shaped tile assure thermal and electrical contact with the wall. 6 figs.

  4. Behnken during EVA 4 - Expedition 16 / STS-13 Joint Operations

    NASA Image and Video Library

    2008-03-21

    S123-E-007816 (21 March 2008) --- Astronaut Robert L. Behnken, STS-123 mission specialist, participates in the mission's fourth scheduled session of extravehicular activity (EVA) as construction and maintenance continue on the International Space Station. During the 6-hour, 24-minute spacewalk, Behnken and astronaut Mike Foreman (out of frame), mission specialist, replaced a failed Remote Power Control Module -- essentially a circuit breaker -- on the station's truss. The spacewalkers also tested a repair method for damaged heat resistant tiles on the space shuttle. This technique used a caulk-gun-like tool named the Tile Repair Ablator Dispenser to dispense a material called Shuttle Tile Ablator-54 into purposely damaged heat shield tiles. The sample tiles will be returned to Earth to undergo extensive testing on the ground.

  5. Foreman during Expedition 16 / STS-123 EVA 4

    NASA Image and Video Library

    2008-03-21

    ISS016-E-033394 (21 March 2008) --- Astronaut Mike Foreman, STS-123 mission specialist, participates in the mission's fourth scheduled session of extravehicular activity (EVA) as construction and maintenance continue on the International Space Station. During the 6-hour, 24-minute spacewalk, Foreman and astronaut Robert L. Behnken (out of frame), mission specialist, replaced a failed Remote Power Control Module -- essentially a circuit breaker -- on the station's truss. The spacewalkers also tested a repair method for damaged heat resistant tiles on the space shuttle. This technique used a caulk-gun-like tool named the Tile Repair Ablator Dispenser to dispense a material called Shuttle Tile Ablator-54 into purposely damaged heat shield tiles. The sample tiles will be returned to Earth to undergo extensive testing on the ground.

  6. Foreman during EVA 4 - Expedition 16 / STS-13 Joint Operations

    NASA Image and Video Library

    2008-03-21

    S123-E-007832 (21 March 2008) --- Astronaut Mike Foreman, STS-123 mission specialist, participates in the mission's fourth scheduled session of extravehicular activity (EVA) as construction and maintenance continue on the International Space Station. During the 6-hour, 24-minute spacewalk, Foreman and astronaut Robert L. Behnken (out of frame), mission specialist, replaced a failed Remote Power Control Module -- essentially a circuit breaker -- on the station's truss. The spacewalkers also tested a repair method for damaged heat resistant tiles on the space shuttle. This technique used a caulk-gun-like tool named the Tile Repair Ablator Dispenser to dispense a material called Shuttle Tile Ablator-54 into purposely damaged heat shield tiles. The sample tiles will be returned to Earth to undergo extensive testing on the ground.

  7. Behnken during EVA 4 - Expedition 16 / STS-13 Joint Operations

    NASA Image and Video Library

    2008-03-21

    S123-E-007907 (21 March 2008) --- Astronaut Robert L. Behnken, STS-123 mission specialist, participates in the mission's fourth scheduled session of extravehicular activity (EVA) as construction and maintenance continue on the International Space Station. During the 6-hour, 24-minute spacewalk, Behnken and astronaut Mike Foreman (out of frame), mission specialist, replaced a failed Remote Power Control Module -- essentially a circuit breaker -- on the station's truss. The spacewalkers also tested a repair method for damaged heat resistant tiles on the space shuttle. This technique used a caulk-gun-like tool named the Tile Repair Ablator Dispenser to dispense a material called Shuttle Tile Ablator-54 into purposely damaged heat shield tiles. The sample tiles will be returned to Earth to undergo extensive testing on the ground.

  8. Behnken and Foreman during EVA 4 - Expedition 16 / STS-13 Joint Operations

    NASA Image and Video Library

    2008-03-21

    S123-E-007838 (21 March 2008) --- Astronauts Robert L. Behnken (top) and Mike Foreman, both STS-123 mission specialists, participate in the mission's fourth scheduled session of extravehicular activity (EVA) as construction and maintenance continue on the International Space Station. During the 6-hour, 24-minute spacewalk, Behnken and Foreman replaced a failed Remote Power Control Module -- essentially a circuit breaker -- on the station's truss. The spacewalkers also tested a repair method for damaged heat resistant tiles on the space shuttle. This technique used a caulk-gun-like tool named the Tile Repair Ablator Dispenser to dispense a material called Shuttle Tile Ablator-54 into purposely damaged heat shield tiles. The sample tiles will be returned to Earth to undergo extensive testing on the ground.

  9. Behnken during EVA 4 - Expedition 16 / STS-13 Joint Operations

    NASA Image and Video Library

    2008-03-21

    S123-E-007906 (21 March 2008) --- Astronaut Robert L. Behnken, STS-123 mission specialist, participates in the mission's fourth scheduled session of extravehicular activity (EVA) as construction and maintenance continue on the International Space Station. During the 6-hour, 24-minute spacewalk, Behnken and astronaut Mike Foreman (out of frame), mission specialist, replaced a failed Remote Power Control Module -- essentially a circuit breaker -- on the station's truss. The spacewalkers also tested a repair method for damaged heat resistant tiles on the space shuttle. This technique used a caulk-gun-like tool named the Tile Repair Ablator Dispenser to dispense a material called Shuttle Tile Ablator-54 into purposely damaged heat shield tiles. The sample tiles will be returned to Earth to undergo extensive testing on the ground.

  10. Behnken during EVA 4 - Expedition 16 / STS-13 Joint Operations

    NASA Image and Video Library

    2008-03-21

    S123-E-007909 (21 March 2008) --- Astronaut Robert L. Behnken, STS-123 mission specialist, participates in the mission's fourth scheduled session of extravehicular activity (EVA) as construction and maintenance continue on the International Space Station. During the 6-hour, 24-minute spacewalk, Behnken and astronaut Mike Foreman (out of frame), mission specialist, replaced a failed Remote Power Control Module -- essentially a circuit breaker -- on the station's truss. The spacewalkers also tested a repair method for damaged heat resistant tiles on the space shuttle. This technique used a caulk-gun-like tool named the Tile Repair Ablator Dispenser to dispense a material called Shuttle Tile Ablator-54 into purposely damaged heat shield tiles. The sample tiles will be returned to Earth to undergo extensive testing on the ground.

  11. Behnken and Foreman during EVA 4 - Expedition 16 / STS-13 Joint Operations

    NASA Image and Video Library

    2008-03-21

    S123-E-007839 (21 March 2008) --- Astronauts Mike Foreman (foreground) and Robert L. Behnken, both STS-123 mission specialists, participate in the mission's fourth scheduled session of extravehicular activity (EVA) as construction and maintenance continue on the International Space Station. During the 6-hour, 24-minute spacewalk, Foreman and Behnken replaced a failed Remote Power Control Module -- essentially a circuit breaker -- on the station's truss. The spacewalkers also tested a repair method for damaged heat resistant tiles on the space shuttle. This technique used a caulk-gun-like tool named the Tile Repair Ablator Dispenser to dispense a material called Shuttle Tile Ablator-54 into purposely damaged heat shield tiles. The sample tiles will be returned to Earth to undergo extensive testing on the ground.

  12. KSC-2009-6811

    NASA Image and Video Library

    2009-12-14

    CAPE CANAVERAL, Fla. - In Orbiter Processing Facility Bay 1 at NASA's Kennedy Space Center in Florida, United Space Alliance technician Jeff Holmes uses heat lamps in a putty repair on some of the high-temperature reusable surface insulation tiles, or HRSI tiles, on the lower forward fuselage of space shuttle Atlantis. An average of 125 tiles are replaced after each mission either due to handling damage or accumulated repairs. These black tiles are optimized for maximum emissivity, which means they lose heat faster than white tiles. This property is required to maximize heat rejection during the hot phase of reentry. Atlantis next is slated to deliver an Integrated Cargo Carrier and Russian-built Mini Research Module to the International Space Station on the STS-132 mission. Launch is targeted for May 14, 2010. Photo credit: NASA/Jack Pfaller

  13. KSC-2009-6812

    NASA Image and Video Library

    2009-12-14

    CAPE CANAVERAL, Fla. - In Orbiter Processing Facility Bay 1 at NASA's Kennedy Space Center in Florida, heat lamps assist United Space Alliance technician Jeff Holmes in a putty repair on some of the high-temperature reusable surface insulation tiles, or HRSI tiles, on the lower forward fuselage of space shuttle Atlantis. An average of 125 tiles are replaced after each mission either due to handling damage or accumulated repairs. These black tiles are optimized for maximum emissivity, which means they lose heat faster than white tiles. This property is required to maximize heat rejection during the hot phase of reentry. Atlantis next is slated to deliver an Integrated Cargo Carrier and Russian-built Mini Research Module to the International Space Station on the STS-132 mission. Launch is targeted for May 14, 2010. Photo credit: NASA/Jack Pfaller

  14. KSC-2009-6810

    NASA Image and Video Library

    2009-12-14

    CAPE CANAVERAL, Fla. - In Orbiter Processing Facility Bay 1 at NASA's Kennedy Space Center in Florida, United Space Alliance technician Jeff Holmes makes a putty repair on some of the high-temperature reusable surface insulation tiles, or HRSI tiles, on the lower forward fuselage of space shuttle Atlantis. An average of 125 tiles are replaced after each mission either due to handling damage or accumulated repairs. These black tiles are optimized for maximum emissivity, which means they lose heat faster than white tiles. This property is required to maximize heat rejection during the hot phase of reentry. Atlantis next is slated to deliver an Integrated Cargo Carrier and Russian-built Mini Research Module to the International Space Station on the STS-132 mission. Launch is targeted for May 14, 2010. Photo credit: NASA/Jack Pfaller

  15. General view of the underside of the Orbiter Discovery on ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    General view of the underside of the Orbiter Discovery on the port side looking toward the starboard side and slightly forward. Note the landing gear assemblies, the jack stands attached to the External Tank (ET) attach points in on the Orbiter/ET propellant interface plate and the black High-Temperature Reusable Surface Insulation. The varying degrees of darkness of the tiles is due to the age of the tiles, the more recently replaced tiles are darker than the older tiles. The pattern created by the tile replacement is unique to each orbiter and becomes their "fingerprint". This view was taken in the Orbiter Processing Facility at Kennedy Space Center. - Space Transportation System, Orbiter Discovery (OV-103), Lyndon B. Johnson Space Center, 2101 NASA Parkway, Houston, Harris County, TX

  16. Spatial chaos of Wang tiles with two symbols

    NASA Astrophysics Data System (ADS)

    Chen, Jin-Yu; Chen, Yu-Jie; Hu, Wen-Guei; Lin, Song-Sun

    2016-02-01

    This investigation completely classifies the spatial chaos problem in plane edge coloring (Wang tiles) with two symbols. For a set of Wang tiles B , spatial chaos occurs when the spatial entropy h ( B ) is positive. B is called a minimal cycle generator if P ( B ) ≠ 0̸ and P ( B ' ) = 0̸ whenever B ' ⫋ B , where P ( B ) is the set of all periodic patterns on ℤ2 generated by B . Given a set of Wang tiles B , write B = C 1 ∪ C 2 ∪ ⋯ ∪ C k ∪ N , where Cj, 1 ≤ j ≤ k, are minimal cycle generators and B contains no minimal cycle generator except those contained in C1∪C2∪⋯∪Ck. Then, the positivity of spatial entropy h ( B ) is completely determined by C1∪C2∪⋯∪Ck. Furthermore, there are 39 equivalence classes of marginal positive-entropy sets of Wang tiles and 18 equivalence classes of saturated zero-entropy sets of Wang tiles. For a set of Wang tiles B , h ( B ) is positive if and only if B contains a MPE set, and h ( B ) is zero if and only if B is a subset of a SZE set.

  17. Describing polyhedral tilings and higher dimensional polytopes by sequence of their two-dimensional components

    PubMed Central

    Nishio, Kengo; Miyazaki, Takehide

    2017-01-01

    Polyhedral tilings are often used to represent structures such as atoms in materials, grains in crystals, foams, galaxies in the universe, etc. In the previous paper, we have developed a theory to convert a way of how polyhedra are arranged to form a polyhedral tiling into a codeword (series of numbers) from which the original structure can be recovered. The previous theory is based on the idea of forming a polyhedral tiling by gluing together polyhedra face to face. In this paper, we show that the codeword contains redundant digits not needed for recovering the original structure, and develop a theory to reduce the redundancy. For this purpose, instead of polyhedra, we regard two-dimensional regions shared by faces of adjacent polyhedra as building blocks of a polyhedral tiling. Using the present method, the same information is represented by a shorter codeword whose length is reduced by up to the half of the original one. Shorter codewords are easier to handle for both humans and computers, and thus more useful to describe polyhedral tilings. By generalizing the idea of assembling two-dimensional components to higher dimensional polytopes, we develop a unified theory to represent polyhedral tilings and polytopes of different dimensions in the same light. PMID:28094254

  18. Microbial deterioration of artistic tiles from the façade of the Grande Albergo Ausonia & Hungaria (Venice, Italy).

    PubMed

    Giacomucci, Lucia; Bertoncello, Renzo; Salvadori, Ornella; Martini, Ilaria; Favaro, Monica; Villa, Federica; Sorlini, Claudia; Cappitelli, Francesca

    2011-08-01

    The Grande Albergo Ausonia & Hungaria (Venice Lido, Italy) has an Art Nouveau polychrome ceramic coating on its façade, which was restored in 2007. Soon after the conservation treatment, many tiles of the façade decoration showed coloured alterations putatively attributed to the presence of microbial communities. To confirm the presence of the biological deposit and the stratigraphy of the Hungaria tiles, stereomicroscope, optical and environmental scanning electron microscope observations were made. The characterisation of the microbial community was performed using a PCR-DGGE approach. This study reported the first use of a culture-independent approach to identify the total community present in biodeteriorated artistic tiles. The case study examined here reveals that the coloured alterations on the tiles were mainly due to the presence of cryptoendolithic cyanobacteria. In addition, we proved that the microflora present on the tiles was generally greatly influenced by the environment of the Hungaria hotel. We found several microorganisms related to the alkaline environment, which is in the range of the tile pH, and related to the aquatic environment, the presence of the acrylic resin Paraloid B72® used during the 2007 treatment and the pollutants of the Venice lagoon.

  19. Lactose-modified DNA tile nanostructures as drug carriers.

    PubMed

    Akkus Sut, Pinar; Tunc, Cansu Umran; Culha, Mustafa

    2016-09-01

    DNA hybridization allows the preparation of nanoscale DNA structures with desired shape and size. DNA structures using simple base pairing can be used for the delivery of drug molecules into the cells. Since DNA carries multiple negative charges, their cellular uptake efficiency is low. Thus, the modification of the DNA structures with molecules that may enhance the cellular internalization may be an option. The objective of this study is to construct DNA-based nanocarrier system and to investigate the cellular uptake of DNA tile with/without lactose modification. Doxorubicin was intercalated to DNA tile and cellular uptake of drug-loaded DNA-based carrier with/without lactose modification was investigated in vitro. HeLa, BT-474, and MDA-MB-231 cancer cells were used for cellular uptake studies and cytotoxicity assays. Using fluorescence spectroscopy, flow cytometry, and confocal microscopy, cellular uptake behavior of DNA tile was investigated. The cytotoxicity of DNA tile structures was determined with WST-1 assay. The results show that modification with lactose effectively increases the intracellular uptake of doxorubicin loaded DNA tile structure by cancer cells compared with the unmodified DNA tile. The findings of this study suggest that DNA-based nanostructures modified with carbohydrates can be used as suitable multifunctional nanocarriers with simple chemical modifications.

  20. Secondary polymer layered impregnated tile

    NASA Technical Reports Server (NTRS)

    Tran, Huy K. (Inventor); Rasky, Daniel J. (Inventor); Szalai, Christine E. (Inventor); Carroll, Joseph A. (Inventor); Hsu, Ming-ta S. (Inventor)

    2005-01-01

    A low density organic polymer impregnated preformed fibrous ceramic article includes a plurality of layers. A front layer includes ceramic fibers or carbon fibers or combinations of ceramic fibers and carbon fibers, and is impregnated with an effective amount of at least one organic polymer. A middle layer includes polymer impregnated ceramic fibers. A back layer includes ceramic fibers or carbon fibers or combinations of ceramic fibers and carbon fibers, and is impregnated with an effective amount of at least one low temperature pyrolyzing organic polymer capable of decomposing without depositing residues.

  1. Natural-color and color-infrared image mosaics of the Colorado River corridor in Arizona derived from the May 2009 airborne image collection

    USGS Publications Warehouse

    Davis, Philip A.

    2013-01-01

    The Grand Canyon Monitoring and Research Center (GCMRC) of the U.S. Geological Survey (USGS) periodically collects airborne image data for the Colorado River corridor within Arizona (fig. 1) to allow scientists to study the impacts of Glen Canyon Dam water release on the corridor’s natural and cultural resources. These data are collected from just above Glen Canyon Dam (in Lake Powell) down to the entrance of Lake Mead, for a total distance of 450 kilometers (km) and within a 500-meter (m) swath centered on the river’s mainstem and its seven main tributaries (fig. 1). The most recent airborne data collection in 2009 acquired image data in four wavelength bands (blue, green, red, and near infrared) at a spatial resolution of 20 centimeters (cm). The image collection used the latest model of the Leica ADS40 airborne digital sensor (the SH52), which uses a single optic for all four bands and collects and stores band radiance in 12-bits. Davis (2012) reported on the performance of the SH52 sensor and on the processing steps required to produce the nearly flawless four-band image mosaic (sectioned into map tiles) for the river corridor. The final image mosaic has a total of only 3 km of surface defects in addition to some areas of cloud shadow because of persistent inclement weather during data collection. The 2009 four-band image mosaic is perhaps the best image dataset that exists for the entire Arizona part of the Colorado River. Some analyses of these image mosaics do not require the full 12-bit dynamic range or all four bands of the calibrated image database, in which atmospheric scattering (or haze) had not been removed from the four bands. To provide scientists and the general public with image products that are more useful for visual interpretation, the 12-bit image data were converted to 8-bit natural-color and color-infrared images, which also removed atmospheric scattering within each wavelength-band image. The conversion required an evaluation of the histograms of each band’s digital-number population within each map tile throughout the corridor and the determination of the digital numbers corresponding to the lower and upper one percent of the picture-element population within each map tile. Visual examination of the image tiles that were given a 1-percent stretch (whereby the lower 1- percent 12-bit digital number is assigned an 8-bit value of zero and the upper 1-percent 12-bit digital number is assigned an 8-bit value of 255) indicated that this stretch sufficiently removed atmospheric scattering, which provided improved image clarity and true natural colors for all surface materials. The lower and upper 1-percent, 12-bit digital numbers for each wavelength-band image in the image tiles exhibit erratic variations along the river corridor; the variations exhibited similar trends in both the lower and upper 1-percent digital numbers for all four wavelength-band images (figs. 2–5). The erratic variations are attributed to (1) daily variations in atmospheric water-vapor content due to monsoonal storms, (2) variations in channel water color due to variable sediment input from tributaries, and (3) variations in the amount of topographic shadows within each image tile, in which reflectance is dominated by atmospheric scattering. To make the surface colors of the stretched, 8-bit images consistent among adjacent image tiles, it was necessary to average both the lower and upper 1-percent digital values for each wavelength-band image over 20 river miles to subdue the erratic variations. The average lower and upper 1-percent digital numbers for each image tile (figs. 2–5) were used to convert the 12-bit image values to 8-bit values and the resulting 8-bit four-band images were stored as natural-color (red, green, and blue wavelength bands) and color-infrared (near-infrared, red, and green wavelength bands) images in embedded geotiff format, which can be read and used by most geographic information system (GIS) and image-processing software. The tiff world files (tfw) are provided, even though they are generally not needed for most software to read an embedded geotiff image. All image data are projected in the State Plane (SP) map projection using the central Arizona zone (202) and the North American Datum of 1983 (NAD83). The map-tile scheme used to segment the corridor image mosaic followed the standard USGS quarter-quadrangle (QQ) map borders, but the high resolution (20 cm) of the images required further quarter segmentation (QQQ) of the standard QQ tiles, where the image mosaic covered a large fraction of a QQ map tile (segmentation shown in (figure 6), where QQ_1 to QQ_4 shows the number convention used to designate a quarter of a QQ tile). To minimize the size of each image tile, each image or map tile was subset to only include that part of the tile that had image data. In addition, some QQQ image tiles within a QQ tile were combined when adjacent QQQ map tiles were small. Thus, some image tiles consist of combinations of QQQ map tiles, some consist of an entire QQ map tile, and some consist of two adjoining QQ map tiles. The final image tiles number 143, which is a large number of files to list on the Internet for both the natural-color and color-infrared images. Thus, the image tiles were placed in seven file folders based on the one-half-degree geographic boundaries within the study area (fig. 7). The map tiles in each file folder were compressed to minimize folder size for more efficient downloading. The file folders are sequentially referred to as zone 1 through zone 7, proceeding down river (fig. 7). The QQ designations of the image tiles contained within each folder or zone are shown on the index map for each respective zone (figs. 8–14).

  2. Surface runoff and subsurface tile drain losses of neonicotinoids and companion herbicides at edge-of-field.

    PubMed

    Chrétien, François; Giroux, Isabelle; Thériault, Georges; Gagnon, Patrick; Corriveau, Julie

    2017-05-01

    With their application as seed coatings, the use of neonicotinoid insecticides increased dramatically during the last decade. They are now frequently detected in aquatic ecosystems at concentrations susceptible to harm aquatic invertebrates at individual and population levels. This study intent was to document surface runoff and subsurface tile drain losses of two common neonicotinoids (thiamethoxam and clothianidin) compared to those of companion herbicides (atrazine, glyphosate, S-metolachlor and mesotrione) at the edge of a 22.5-ha field under a corn-soybean rotation. A total of 14 surface runoff and tile drain discharge events were sampled over two years. Events and annual unit mass losses were computed using flow-weighted concentrations and total surface runoff and tile drain flow volumes. Detection frequencies close to 100% in edge-of-field surface runoff and tile drain water samples were observed for thiamethoxam and clothianidin even though only thiamethoxam had been applied in the first year. In 2014, thiamethoxam median concentrations in surface runoff and tile drain samples were respectively 0.46 and 0.16 μg/L, while respective maximum concentrations of 2.20 and 0.44 μg/L were measured in surface runoff and tile drain samples during the first post-seeding storm event. For clothianidin, median concentrations in surface runoff and tile drain samples were 0.02 and 0.01, μg/L, and respective maximum concentrations were 0.07 μg/L and 0.05 μg/L. Surface runoff and tile drain discharge were key transport mechanisms with similar contributions of 53 and 47% of measured mass losses, respectively. Even if thiamethoxam was applied at a relatively low rate and had a low mass exportation value (0.3%), the relative toxicity was one to two orders of magnitude higher than those of the other chemicals applied in 2014 and 2015. Companion herbicides, except glyphosate in tile drains, exceeded their water quality guideline during one sampling campaign after application but rapidly resumed below these limits. Crown Copyright © 2017. Published by Elsevier Ltd. All rights reserved.

  3. A low density microarray method for the identification of human papillomavirus type 18 variants.

    PubMed

    Meza-Menchaca, Thuluz; Williams, John; Rodríguez-Estrada, Rocío B; García-Bravo, Aracely; Ramos-Ligonio, Ángel; López-Monteon, Aracely; Zepeda, Rossana C

    2013-09-26

    We describe a novel microarray based-method for the screening of oncogenic human papillomavirus 18 (HPV-18) molecular variants. Due to the fact that sequencing methodology may underestimate samples containing more than one variant we designed a specific and sensitive stacking DNA hybridization assay. This technology can be used to discriminate between three possible phylogenetic branches of HPV-18. Probes were attached covalently on glass slides and hybridized with single-stranded DNA targets. Prior to hybridization with the probes, the target strands were pre-annealed with the three auxiliary contiguous oligonucleotides flanking the target sequences. Screening HPV-18 positive cell lines and cervical samples were used to evaluate the performance of this HPV DNA microarray. Our results demonstrate that the HPV-18's variants hybridized specifically to probes, with no detection of unspecific signals. Specific probes successfully reveal detectable point mutations in these variants. The present DNA oligoarray system can be used as a reliable, sensitive and specific method for HPV-18 variant screening. Furthermore, this simple assay allows the use of inexpensive equipment, making it accessible in resource-poor settings.

  4. A Low Density Microarray Method for the Identification of Human Papillomavirus Type 18 Variants

    PubMed Central

    Meza-Menchaca, Thuluz; Williams, John; Rodríguez-Estrada, Rocío B.; García-Bravo, Aracely; Ramos-Ligonio, Ángel; López-Monteon, Aracely; Zepeda, Rossana C.

    2013-01-01

    We describe a novel microarray based-method for the screening of oncogenic human papillomavirus 18 (HPV-18) molecular variants. Due to the fact that sequencing methodology may underestimate samples containing more than one variant we designed a specific and sensitive stacking DNA hybridization assay. This technology can be used to discriminate between three possible phylogenetic branches of HPV-18. Probes were attached covalently on glass slides and hybridized with single-stranded DNA targets. Prior to hybridization with the probes, the target strands were pre-annealed with the three auxiliary contiguous oligonucleotides flanking the target sequences. Screening HPV-18 positive cell lines and cervical samples were used to evaluate the performance of this HPV DNA microarray. Our results demonstrate that the HPV-18's variants hybridized specifically to probes, with no detection of unspecific signals. Specific probes successfully reveal detectable point mutations in these variants. The present DNA oligoarray system can be used as a reliable, sensitive and specific method for HPV-18 variant screening. Furthermore, this simple assay allows the use of inexpensive equipment, making it accessible in resource-poor settings. PMID:24077317

  5. Development of an electro-responsive platform for the controlled transfection of mammalian cells

    NASA Astrophysics Data System (ADS)

    Hook, Andrew L.; Thissen, Helmut W.; Hayes, Jason P.; Voelcker, Nicolas H.

    2005-02-01

    The recent development of living microarrays as novel tools for the analysis of gene expression in an in-situ environment promises to unravel gene function within living organisms. In order to significantly enhance microarray performance, we are working towards electro-responsive DNA transfection chips. This study focuses on the control of DNA adsorption and desorption by appropriate surface modification of highly doped p++ silicon. Silicon was modified by plasma polymerisation of allylamine (ALAPP), a non-toxic surface that sustains cell growth. Subsequent high surface density grafting of poly(ethylene oxide) formed a layer resistant to biomolecule adsorption and cell attachment. Spatially controlled excimer laser ablation of the surface produced micron resolution patterns of re-exposed plasma polymer whilst the rest of the surface remained non-fouling. We observed electro-stimulated preferential adsorption of DNA to the ALAPP surface and subsequent desorption by the application of a negative bias. Cell culture experiments with HEK 293 cells demonstrated efficient and controlled transfection of cells using the expression of green fluorescent protein as a reporter. Thus, these chemically patterned surfaces are promising platforms for use as living microarrays.

  6. Perceiving colour at a glimpse: the relevance of where one fixates.

    PubMed

    Brenner, Eli; Granzier, Jeroen J M; Smeets, Jeroen B J

    2007-09-01

    We used classification images to examine whether certain parts of a surface are particularly important when judging its colour, such as its centre, its edges, or where one is looking. The scene consisted of a regular pattern of square tiles with random colours from along a short line in colour space. Targets defined by a square array of brighter tiles were presented for 200ms. The colours of the tiles within the target were biased by an amount that led to about 70% of the responses being correct. Subjects fixated a point that fell within the target's lower left quadrant and reported each target's colour. They tended to report the colour of the tiles near the fixation point. The influence of the tiles' colour reversed at the target's border and was weaker outside the target. The colour at the border itself was not particularly important. When coloured tiles were also presented before (and after) target presentation they had an opposite (but weaker) effect, indicating that the change in colour is important. Comparing the influence of tiles outside the target with that of tiles at the position at which the target would soon appear suggests that when judging surface colours during the short "glimpses" between saccades, temporal comparisons can be at least as important as spatial ones. We conclude that eye movements are important for colour vision, both because they determine which part of the surface of interest will be given most weight and because the perceived colour of such a surface also depends on what one looked at last.

  7. Development of a nondestructive vibration technique for bond assessment of Space Shuttle tiles

    NASA Technical Reports Server (NTRS)

    Moslehy, Faissal A.

    1994-01-01

    This final report describes the achievements of the above titled project. The project is funded by NASA-KSC (Grant No. NAG 10-0117) for the period of 1 Jan. to 31 Dec. 1993. The purpose of this project was to develop a nondestructive, noncontact technique based on 'vibration signature' of tile systems to quantify the bond conditions of the thermal protection system) tiles of Space Shuttle orbiters. The technique uses a laser rapid scan system, modal measurements, and finite element modeling. Finite element models were developed for tiles bonded to both clamped and deformable integrated skin-stringer orbiter mid-fuselage. Results showed that the size and location of a disbonded tile can be determined from frequency and mode shape information. Moreover, a frequency response survey was used to quickly identify the disbonded tiles. The finite element results were compared with experimentally determined frequency responses of a 17-tile test panel, where a rapidscan laser system was employed. An excellent degree of correlation between the mathematical simulation and experimental results was realized. An inverse solution for single-tile assemblies was also derived and is being implemented into a computer program that can interact with the modal testing software. The output of the program displays the size and location of disbond. This program has been tested with simulated input (i.e., finite element data), and excellent agreement between predicted and simulated disbonds was shown. Finally, laser vibration imaging and acoustic emission techniques were shown to be well suited for detecting and monitoring the progressive damage in Graphite/Epoxy composite materials.

  8. Isotopic mixing model for quantifying contributions of soil water and groundwater in subsurface ('tile') drainage

    NASA Astrophysics Data System (ADS)

    Kennedy, C. D.; Gall, H.; Jafvert, C. T.; Bowen, G. J.

    2010-12-01

    Subsurface (‘tile’) drainage, consisting of buried grids of perforated pipe, has provided a means of converting millions of acres of poorly drained soils in the Midwestern U.S. into fertile cropland. However, by altering pathways and rates of soil water and groundwater movement through agricultural lands, this practice may accelerate the loss of nitrate and other agrochemicals. To better understand the hydrological controls on nitrogen dynamics in artificially drained agricultural watersheds, a field sampling program has been established at the Animal Science Research and Education Center (ASREC) at Purdue University (West Lafayette, Indiana) to (1) measure precipitation amount, tile flow, and water-table elevation, and (2) collect water samples for analysis of nitrate, major ions, and oxygen isotope ratios in precipitation, tile drainage, shallow (1 m) and deep (3 m) groundwater, and soil water during storm events. Preliminary physical, chemical, and isotopic data collected at the ASREC show a coincident timing of peak storm ‘event water’ and peak nitrate flux in tile drainage, suggesting significant routing of infiltrating event water. In this work, we aim to refine our understanding of tile drainage at the ASREC by developing a mixing model for partitioning contributions of soil water and groundwater in tile drainage during several storm runoff events ranging in precipitation intensity and coinciding with varying antecedent soil moisture conditions. The results of our model will describe tile drainage in terms of its hydrological components, soil water and groundwater, which in turn will provide a means of incorporating the effects of tile drainage in surface/subsurface hydrological transport models.

  9. Thermal certification tests of Orbiter Thermal Protection System tiles coated with KSC coating slurries

    NASA Technical Reports Server (NTRS)

    Milhoan, James D.; Pham, Vuong T.; Sherborne, William D.

    1993-01-01

    Thermal tests of Orbiter thermal protection system (TPS) tiles, which were coated with borosilicate glass slurries fabricated at Kennedy Space Center (KSC), were performed in the Radiant Heat Test Facility and the Atmospheric Reentry Materials & Structures Evaluation Facility at Johnson Space Center to verify tile coating integrity after exposure to multiple entry simulation cycles in both radiant and convective heating environments. Eight high temperature reusable surface insulation (HRSI) tiles and six low temperature reusable surface insulation (LRSI) tiles were subjected to 25 cycles of radiant heat at peaked surface temperatures of 2300 F and 1200 F, respectively. For the LRSI tiles, an additional cycle at peaked surface temperature of 2100 F was performed. There was no coating crack on any of the HRSI specimens. However, there were eight small coating cracks (less than 2 inches long) on two of the six LRSI tiles on the 26th cycle. There was practically no change on the surface reflectivity, physical dimensions, or weight of any of the test specimens. There was no observable thermal-chemical degradation of the coating either. For the convective heat test, eight HRSI tiles were tested for five cycles at a surface temperature of 2300 F. There was no thermal-induced coating crack on any of the test specimens, almost no change on the surface reflectivity, and no observable thermal-chemical degradation with an exception of minor slumping of the coating under painted TPS identification numbers. The tests demonstrated that KSC's TPS slurries and coating processes meet the Orbiter's thermal specification requirements.

  10. [Lead exposure in the ceramic tile industry: time trends and current exposure levels].

    PubMed

    Candela, S; Ferri, F; Olmi, M

    1998-01-01

    There is a high density of industries for the production of ceramic tiles in the District of Scandiano (province of Reggio Emilia, Emilia Romagna region). In this area, since the beginning of 1970s, the time trend of Pb exposure in ceramic tile plants has been evaluated by means of biological monitoring (BM) data collected at the Service of Prevention and Safety in the Work Environment and its associated Toxicology Laboratory. From these data, a clear decreasing time trend of exposure levels is documented, the reduction being more evident during the seventies and in 1985-88. During the seventies BM was introduced systematically in all ceramic tile plants with the determination of delta-aminolevulinic acid in urine (ALA-U). As a consequence of the BM programme, hygienic measures for the abatement of pollution inside the plants were implemented, and a reduction, from 20.6% to 2%, of ALA-U values exceeding 10 mg/l, was observed. In 1985, the determination of lead in blood (PbB) replaced that of ALA-U in the BM programmes and highlighted the persistence of high level of exposure to Pb, which could not be outlined by means of ALA-U because of its lower sensitivity. PbB levels were 36.1 micrograms/100 ml and 25.7 micrograms/100 ml in male and female workers, respectively. These results required the implementation, within the plants, of additional hygienic measures and a significant reduction of PbB was obtained in the following three years. In 1988 PbB levels were 26.0 +/- 10.7 and 21.6 +/- 10.3 micrograms/100 ml in male and female workers, respectively. In 1993-95 Pb levels were obtained from 1328 male and 771 female workers of 56 plants, accounting for about 40% of the total number of workers in the ceramic industry, in the zones of Sassuolo and Scandiano. Exposure levels are not different from those observed in the preceding years, with PbB levels of 25.3 +/- 11.1 and 19.1 +/- 9.2 micrograms/100 ml in male and female workers, respectively.

  11. Polybrominated diphenyl ethers, perfluorinated alkylated substances, and metals in tile drainage and groundwater following applications of municipal biosolids to agricultural fields.

    PubMed

    Gottschall, N; Topp, E; Edwards, M; Russell, P; Payne, M; Kleywegt, S; Curnoe, W; Lapen, D R

    2010-01-15

    Polybrominated diphenyl ethers (PBDEs), perfluorinated alkylated substances (PFAS), and metals were monitored in tile drainage and groundwater following liquid (LMB) and dewatered municipal biosolid (DMB) applications to silty-clay loam agricultural field plots. LMB was applied (93,500 L ha(-1)) in late fall 2005 via surface spreading on un-tilled soil (SS(LMB)), and a one-pass aerator-based pre-tillage prior to surface spreading (AerWay SSD) (A). The DMB was applied (8 Mg d wha(-1)) in early summer 2006 on the same plots by injecting DMB beneath the soil surface (DI), and surface spreading on un-tilled soil (SS(DMB)). Key PBDE congeners (BDE-47, -99, -100, -153, -154, -183, -209) comprising 97% of total PBDE in LMB, had maximum tile effluent concentrations ranging from 6 to 320 ng L(-1) during application-induced tile flow. SS(LMB) application-induced tile mass loads for these PBDE congeners were significantly higher than those for control (C) plots (no LMB) (p<0.05), but not A plots (p>0.05). PBDE mass loss via tile (0-2h post-application) as a percent of mass applied was approximately 0.04-0.1% and approximately 0.8-1.7% for A and SS(LMB), respectively. Total PBDE loading to soil via LMB and DMB application was 0.0018 and 0.02 kg total PBDE ha(-1)yr(-1), respectively. Total PBDE concentration in soil (0-0.2m) after both applications was 115 ng g(-1)dw, (sampled 599 days and 340 days post LMB and DMB applications respectively). Of all the PFAS compounds, only PFOS (max concentration=17 ng L(-1)) and PFOA (12 ng L(-1)) were found above detectable limits in tile drainage from the application plots. Mass loads of metals in tile for the LMB application-induced tile hydrograph event, and post-application concentrations of metals in groundwater, showed significant (p<0.05) land application treatment effects (SS(LMB)>A>C for tile and SS(LMB) and A>C for groundwater for most results). Following DMB application, no significant differences in metal mass loads in tile were found between SS(DMB) and DI treatments (PBDE/PFAS were not measured). But for many metals (Cu, Se, Cd, Mo, Hg and Pb) both SS(DMB) and DI loads were significantly higher than those from C, but only during <100 days post DMB application. Clearly, pre-tilling the soil (e.g., A) prior to surface application of LMB will reduce application-based PBDE and metal contamination to tile drainage and shallow groundwater. Directly injecting DMB in soil does not significantly increase metal loading to tile drains relative to SS(DMB), thus, DI should be considered a DMB land application option. Crown Copyright 2009. Published by Elsevier B.V. All rights reserved.

  12. Use of biochar amendments for removing bacteria from simulated tile-drainage waters

    USDA-ARS?s Scientific Manuscript database

    The addition of biochar has been shown to increase bacterial removal rates by several orders of magnitude in sand-packed columns, suggesting that biochar may be a suitable amendment for use in end-of-tile filter systems to remove indicator and pathogenic microorganisms in tile-drainage waters. Addit...

  13. Dissolved organic carbon loading from the field to watershed scale in tile-drained landscapes

    USDA-ARS?s Scientific Manuscript database

    Dissolved organic carbon (DOC) is an integral part to the functioning of aquatic ecosystems; yet, there is a paucity of data on DOC delivery and management in tile-drained agricultural headwater watersheds. The objective of this study was to quantify the contribution of subsurface tile drains to wat...

  14. TEST PROTOCOL FOR EVALUATING SMOG REDUCING ROOFING TILES

    EPA Science Inventory

    The TiO2 catalyst on the tiles will reduce the overall concentration of NOx. Increasing light intensity, humidity, or residence time is expected to increase the rate of degradation of the NOx. The weathering if the tile is expected to have a mi...

  15. Layer-by-layer growth of vertex graph of Penrose tiling

    NASA Astrophysics Data System (ADS)

    Shutov, A. V.; Maleev, A. V.

    2017-09-01

    The growth form for the vertex graph of Penrose tiling is found to be a regular decagon. The lower and upper bounds for this form, coinciding with it, are strictly proven. A fractal character of layer-by-layer growth is revealed for some subgraphs of the vertex graph of Penrose tiling.

  16. Projectile Impact Effects on Aircraft Wire Harnesses

    DTIC Science & Technology

    1986-01-08

    circuits Aircraft wire harnesses Modified ETFE Projectile damage and fires 19 ABSTRACT (Continue on reverse if necessary and identit) by block number...Tile Firifinr~ari~ne An overview of tile test fiririý raný,e is shown in Figure b. In tile for-eyrouria is tre rifle, witzh stock removed, utor iuyo e

  17. --No Title--

    Science.gov Websites

    {margin-top:24px}@media(min-width:768px){.feature-secondary .link-tile{margin-top:0}.showcase{height:431px }}.feature-secondary .link-tile+.link-tile{margin-top:24px}@media(min-width:992px){.showcase{height:545px }}@media(min-width:1200px){.showcase{height:649px}}.showcase{font-family:Roboto,'Helvetica Neue',Helvetica

  18. Promoting Active Learning in Technology-Infused TILE Classrooms at the University of Iowa

    ERIC Educational Resources Information Center

    Van Horne, Sam; Murniati, Cecilia; Gaffney, Jon D. H.; Jesse, Maggie

    2012-01-01

    In this case study, the authors describe the successful implementation of technology-infused TILE classrooms at the University of Iowa. A successful collaboration among campus units devoted to instructional technologies and teacher development, the TILE Initiative has provided instructors with a new set of tools to support active learning. The…

  19. DETECTION OF BACTERIAL CYTOTOXIC ACTIVITIES FROM WATER-DAMAGED CEILING TILE MATERIAL FOLLOWING INCUBATION ON BLOOD AGAR

    EPA Science Inventory

    Samples of ceiling tiles with high levels of bacteria exhibited cytotoxic activities on a HEP-2 tissue culture assay. Ceiling tiles containing low levels of bacterial colonization did not show cytotoxic activities on the HEP-2 tissue culture assay. Using a spread plate procedure ...

  20. Epidemiology of Pelvic Ring Fractures in a Level 1 Trauma Center in the Netherlands

    PubMed Central

    Biert, Jan; Edwards, Michael John Richard

    2017-01-01

    Purpose This study was conducted to study the epidemiology, classification, treatment and outcome of a large patient group with pelvic ring injury in a level 1 trauma center in the Netherlands. Materials and Methods In the period of 2004 to 2014, we encountered 537 patients with a pelvic fracture. Many of them are due to a high energy trauma and therefore many concomitant injuries are observed. Tile A fractures were seen in 137 patients (25.5%), Tile B fractures in 211 (39.3%) and Tile C fractures in 189 patients (35.2%). Results Patients with unstable fracture types (Tile B1 and B3, Tile C) had significantly higher injury severity score, transfusion rates, need for laparotomy and definitive operative stabilization and complication rate. However, mortality did not differ significantly among Tile A, B or C fractures. Conclusion Overall outcome was good with a mortality rate of 13.6%, which is comparable with other rAelpmorotsst. half of the patients treated could directly be dismissed to their own homes. PMID:29250500

  1. The ATLAS tile calorimeter performance at the LHC

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Calkins, R.

    The Tile Calorimeter (TileCal), the central section of the hadronic calorimeter of the ATLAS experiment, is a key detector component to detect hadrons, jets and taus and to measure the missing transverse energy. Due to the very good muon signal to noise ratio it assists the spectrometer in the identification and reconstruction of muons. TileCal is built of steel and scintillating tiles coupled to optical fibers and read out by photomultipliers. The calorimeter is equipped with systems that allow to monitor and to calibrate each stage of the read out system exploiting different signal sources: laser light, charge injection andmore » a radioactive source. The performance of the calorimeter has been measured and monitored using calibration data, random triggered data, cosmic muons and more importantly LHC collision events. The results presented here assess the absolute energy scale calibration precision, the energy and timing uniformity and the synchronization precision. The ensemble of the results demonstrates a very good understanding of the performance of the Tile Calorimeter that is proved to be well within the design expectations. (authors)« less

  2. Preparation of sintered foam materials by alkali-activated coal fly ash.

    PubMed

    Zhao, Yelong; Ye, Junwei; Lu, Xiaobin; Liu, Mangang; Lin, Yuan; Gong, Weitao; Ning, Guiling

    2010-02-15

    Coal fly ash from coal fired power stations is a potential raw material for the production of ceramic tiles, bricks and blocks. Previous works have demonstrated that coal fly ash consists mainly of glassy spheres that are relatively resistant to reaction. An objective of this research was to investigate the effect of alkali on the preparation process of the foam material. Moreover, the influence of foam dosage on the water absorption, apparent density and compressive strength was evaluated. The experimental results showed that homogenous microstructures of interconnected pores could be obtained by adding 13 wt.% foaming agent at 1050 degrees C, leading to foams presenting water absorption, apparent density and compressive strength values of about 126.5%, 0.414 g/cm(3), 6.76 MPa, respectively.

  3. Identification of Escherichia coli O157 by Using a Novel Colorimetric Detection Method with DNA Microarrays

    PubMed Central

    Swimley, Michelle S.; Taylor, Amber W.; Dawson, Erica D.

    2011-01-01

    Abstract Shiga toxin–producing Escherichia coli O157 is a leading cause of foodborne illness worldwide. To evaluate better methods to rapidly detect and genotype E. coli O157 strains, the present study evaluated the use of ampliPHOX, a novel colorimetric detection method based on photopolymerization, for pathogen identification with DNA microarrays. A low-density DNA oligonucleotide microarray was designed to target stx1 and stx2 genes encoding Shiga toxin production, the eae gene coding for adherence membrane protein, and the per gene encoding the O157-antigen perosamine synthetase. Results from the validation experiments demonstrated that the use of ampliPHOX allowed the accurate genotyping of the tested E. coli strains, and positive hybridization signals were observed for only probes targeting virulence genes present in the reference strains. Quantification showed that the average signal-to-noise ratio values ranged from 47.73 ± 7.12 to 76.71 ± 8.33, whereas average signal-to-noise ratio values below 2.5 were determined for probes where no polymer was formed due to lack of specific hybridization. Sensitivity tests demonstrated that the sensitivity threshold for E. coli O157 detection was 100–1000 CFU/mL. Thus, the use of DNA microarrays in combination with photopolymerization allowed the rapid and accurate genotyping of E. coli O157 strains. PMID:21288130

  4. SimArray: a user-friendly and user-configurable microarray design tool

    PubMed Central

    Auburn, Richard P; Russell, Roslin R; Fischer, Bettina; Meadows, Lisa A; Sevillano Matilla, Santiago; Russell, Steven

    2006-01-01

    Background Microarrays were first developed to assess gene expression but are now also used to map protein-binding sites and to assess allelic variation between individuals. Regardless of the intended application, efficient production and appropriate array design are key determinants of experimental success. Inefficient production can make larger-scale studies prohibitively expensive, whereas poor array design makes normalisation and data analysis problematic. Results We have developed a user-friendly tool, SimArray, which generates a randomised spot layout, computes a maximum meta-grid area, and estimates the print time, in response to user-specified design decisions. Selected parameters include: the number of probes to be printed; the microtitre plate format; the printing pin configuration, and the achievable spot density. SimArray is compatible with all current robotic spotters that employ 96-, 384- or 1536-well microtitre plates, and can be configured to reflect most production environments. Print time and maximum meta-grid area estimates facilitate evaluation of each array design for its suitability. Randomisation of the spot layout facilitates correction of systematic biases by normalisation. Conclusion SimArray is intended to help both established researchers and those new to the microarray field to develop microarray designs with randomised spot layouts that are compatible with their specific production environment. SimArray is an open-source program and is available from . PMID:16509966

  5. Chicken interferome: avian interferon-stimulated genes identified by microarray and RNA-seq of primary chick embryo fibroblasts treated with a chicken type I interferon (IFN-α).

    PubMed

    Giotis, Efstathios S; Robey, Rebecca C; Skinner, Natalie G; Tomlinson, Christopher D; Goodbourn, Stephen; Skinner, Michael A

    2016-08-05

    Viruses that infect birds pose major threats-to the global supply of chicken, the major, universally-acceptable meat, and as zoonotic agents (e.g. avian influenza viruses H5N1 and H7N9). Controlling these viruses in birds as well as understanding their emergence into, and transmission amongst, humans will require considerable ingenuity and understanding of how different species defend themselves. The type I interferon-coordinated response constitutes the major antiviral innate defence. Although interferon was discovered in chicken cells, details of the response, particularly the identity of hundreds of stimulated genes, are far better described in mammals. Viruses induce interferon-stimulated genes but they also regulate the expression of many hundreds of cellular metabolic and structural genes to facilitate their replication. This study focusses on the potentially anti-viral genes by identifying those induced just by interferon in primary chick embryo fibroblasts. Three transcriptomic technologies were exploited: RNA-seq, a classical 3'-biased chicken microarray and a high density, "sense target", whole transcriptome chicken microarray, with each recognising 120-150 regulated genes (curated for duplication and incorrect assignment of some microarray probesets). Overall, the results are considered robust because 128 of the compiled, curated list of 193 regulated genes were detected by two, or more, of the technologies.

  6. Breakthrough of two pesticides into tile drain and shallow groundwater: comparison of tile drain reaction and soil profiles within a field scale irrigation experiment

    NASA Astrophysics Data System (ADS)

    Klaus, Julian; Zehe, Erwin; Elsner, Martin; Palm, Juliane; Schneider, Dorothee; Schröder, Boris; Steinbeiss, Sibylle; West, Stephanie

    2010-05-01

    Preferential flow in macropores is a key process which strongly affects infiltration and may cause rapid transport of pesticides into depths of 80 to 150 cm. At these depths they experience a much slower degradation, may leach into shallow groundwater or enter a tile-drain and are transported into surface water bodies. Therefore, preferential transport might be an environmental problem, if the topsoil is bypassed, which has been originally thought to act as a filter to protect the subsoil and shallow groundwater. To investigate the behaviour of two pesticides with different chemical characteristics and to compare their transport behaviour in soil and into the tile drain an irrigation experiment was performed on a 400 m² field site. The experimental plot is located in the Weiherbach valley, south-west Germany, which basic geology consists of Loess and Keuper layers, the soil at the test site is a gleyic Colluvisol. The distance of the irrigation site to the Weiherbach brook is approximately 12 m, the field is drained with a tile-drain in about 1.2 m depth and shows discharge over the entire year. Three hours before the irrigation started, the farmer applied a pesticide solution consisting of Isoproturon (80 g) and Flufenacet (20 g) (IPU and FLU) according to conventional agricultural practice on the field plot. The irrigation took place in three time blocks (80 min, 60 min, 80 min) with in total 33.6 mm of precipitation. During the first block 1600 g of Bromide were mixed in the irrigation water. The drainage outlet was instrumented with a pressure probe. About 50 water samples ware taken during the experimental day, and several samples more the days after the experiment. They were analysed for the pesticides, bromide and water isotopes. In the two days after the experiment three soil profiles were excavated and soil samples were taken on a 10x10 cm² scheme. One week after the experiment two additional profiles were excavated. The soil was analysed for IPU, FLU and bromide. The tile drain water showed traces of bromide and both pesticides within a few minutes. IPU showed highest concentration before the hydrograph started to increase, while bromide and FLU are strongly correlated to the hydrograph. Although IPU is less sorptive than FLU the concentrations and total transported mass of FLU were significantly higher then for IPU. The hydrograph reacted with two peaks on the three block irrigation; the two peaks can be attributed to the second and third irrigation block. Analysis of the water isotopes showed that during the experiment the event water mainly consisted of soil water. While the tile drain showed significant reaction in pesticides transport the picture deriving from soil profiles were different. Especially FLU was found mainly in the upper soil parts, so the bypassing might occurred so fast that it was only marginally absorbed in deeper soil party, but transported to the drain or shallow groundwater. As preferential flow paths earthworm burrows of different species could be identified, although the area density and species number of anecic earthworms was quite low compared to other field sites.

  7. Behnken during Expedition 16 / STS-123 EVA 4

    NASA Image and Video Library

    2008-03-21

    ISS016-E-033400 (21 March 2008) --- Astronaut Robert L. Behnken, STS-123 mission specialist, participates in the mission's fourth scheduled session of extravehicular activity (EVA) as construction and maintenance continue on the International Space Station. During the 6-hour, 24-minute spacewalk, Behnken and astronaut Mike Foreman (out of frame), mission specialist, replaced a failed Remote Power Control Module -- essentially a circuit breaker -- on the station's truss. The spacewalkers also tested a repair method for damaged heat resistant tiles on the space shuttle. This technique used a caulk-gun-like tool named the Tile Repair Ablator Dispenser to dispense a material called Shuttle Tile Ablator-54 into purposely damaged heat shield tiles. The sample tiles will be returned to Earth to undergo extensive testing on the ground. A portion of the Space Shuttle Endeavour payload bay is visible in the background.

  8. Finding minimum spanning trees more efficiently for tile-based phase unwrapping

    NASA Astrophysics Data System (ADS)

    Sawaf, Firas; Tatam, Ralph P.

    2006-06-01

    The tile-based phase unwrapping method employs an algorithm for finding the minimum spanning tree (MST) in each tile. We first examine the properties of a tile's representation from a graph theory viewpoint, observing that it is possible to make use of a more efficient class of MST algorithms. We then describe a novel linear time algorithm which reduces the size of the MST problem by half at the least, and solves it completely at best. We also show how this algorithm can be applied to a tile using a sliding window technique. Finally, we show how the reduction algorithm can be combined with any other standard MST algorithm to achieve a more efficient hybrid, using Prim's algorithm for empirical comparison and noting that the reduction algorithm takes only 0.1% of the time taken by the overall hybrid.

  9. A Review of Methods for the Manufacture of Residential Roofing Materials

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Akbari, Hashem; Levinson, Ronnen; Berdahl, Paul

    2003-06-01

    Shingles, tiles, and metal products comprise over 80% (by roof area) of the California roofing market (54-58% fiberglass shingle, 8-10% concrete tile, 8-10% clay tile, 7% metal, 3% wood shake, and 3% slate). In climates with significant demand for cooling energy, increasing roof solar reflectance reduces energy consumption in mechanically cooled buildings, and improves occupant comfort in non-conditioned buildings. This report examines methods for manufacturing fiberglass shingles, concrete tiles, clay tiles, and metal roofing. The report also discusses innovative methods for increasing the solar reflectance of these roofing materials. We have focused on these four roofing products because they aremore » typically colored with pigmented coatings or additives. A better understanding of the current practices for manufacturing colored roofing materials would allow us to develop cool colored materials creatively and more effectively.« less

  10. Managing tile drainage, subirrigation, and nitrogen fertilization to enhance crop yields and reduce nitrate loss.

    PubMed

    Drury, C F; Tan, C S; Reynolds, W D; Welacky, T W; Oloya, T O; Gaynor, J D

    2009-01-01

    Improving field-crop use of fertilizer nitrogen is essential for protecting water quality and increasing crop yields. The objective of this study was to determine the effectiveness of controlled tile drainage (CD) and controlled tile drainage with subsurface irrigation (CDS) for mitigating off-field nitrate losses and enhancing crop yields. The CD and CDS systems were compared on a clay loam soil to traditional unrestricted tile drainage (UTD) under a corn (Zea Mays L.)-soybean (Glycine Max. (L.) Merr.) rotation at two nitrogen (N) fertilization rates (N1: 150 kg N ha(-1) applied to corn, no N applied to soybean; N2: 200 kg N ha(-1) applied to corn, 50 kg N ha(-1) applied to soybean). The N concentrations in tile flow events with the UTD treatment exceeded the provisional long-term aquatic life limit (LT-ALL) for freshwater (4.7 mg N L(-1)) 72% of the time at the N1 rate and 78% at the N2 rate, whereas only 24% of tile flow events at N1 and 40% at N2 exceeded the LT-ALL for the CDS treatment. Exceedances in N concentration for surface runoff and tile drainage were greater during the growing season than the non-growing season. At the N1 rate, CD and CDS reduced average annual N losses via tile drainage by 44 and 66%, respectively, relative to UTD. At the N2 rate, the average annual decreases in N loss were 31 and 68%, respectively. Crop yields from CDS were increased by an average of 2.8% relative to UTD at the N2 rate but were reduced by an average of 6.5% at the N1 rate. Hence, CD and CDS were effective for reducing average nitrate losses in tile drainage, but CDS increased average crop yields only when additional N fertilizer was applied.

  11. Jigsaw puzzle metasurface for multiple functions: polarization conversion, anomalous reflection and diffusion.

    PubMed

    Zhao, Yi; Cao, Xiangyu; Gao, Jun; Liu, Xiao; Li, Sijia

    2016-05-16

    We demonstrate a simple reconfigurable metasurface with multiple functions. Anisotropic tiles are investigated and manufactured as fundamental elements. Then, the tiles are combined in a certain sequence to construct a metasurface. Each of the tiles can be adjusted independently which is like a jigsaw puzzle and the whole metasurface can achieve diverse functions by different layouts. For demonstration purposes, we realize polarization conversion, anomalous reflection and diffusion by a jigsaw puzzle metasurface with 6 × 6 pieces of anisotropic tile. Simulated and measured results prove that our method offers a simple and effective strategy for metasurface design.

  12. Thermal insulation attaching means. [adhesive bonding of felt vibration insulators under ceramic tiles

    NASA Technical Reports Server (NTRS)

    Leger, L. J. (Inventor)

    1978-01-01

    An improved isolation system is provided for attaching ceramic tiles of insulating material to the surface of a structure to be protected against extreme temperatures of the nature expected to be encountered by the space shuttle orbiter. This system isolates the fragile ceramic tiles from thermally and mechanically induced vehicle structural strains. The insulating tiles are affixed to a felt isolation pad formed of closely arranged and randomly oriented fibers by means of a flexible adhesive and in turn the felt pad is affixed to the metallic vehicle structure by an additional layer of flexible adhesive.

  13. KSC-08pd1921

    NASA Image and Video Library

    2008-07-10

    CAPE CANAVERAL, Fla. – In the Tile Shop at NASA's Kennedy Space Center, a United Space Alliance machinist, Tony Rollins, is setting up the tracer mill to machine the Boeing Rigid Insulation-18, or BRI-18, tile. BRI-18 is the strongest material used for thermal insulation on the orbiters and, when coated to produce toughened unipiece fibrous insulation, provides a tile with extremely high-impact resistance. It is replacing tiles on areas of the vehicle where impact risk is high. These areas include the landing gear doors, the wing leading edge and the external tank doors. Photo credit: NASA/Jim Grossmann

  14. Using Campylobacter spp. and Escherichia coli data and Bayesian microbial risk assessment to examine public health risks in agricultural watersheds under tile drainage management.

    PubMed

    Schmidt, P J; Pintar, K D M; Fazil, A M; Flemming, C A; Lanthier, M; Laprade, N; Sunohara, M D; Simhon, A; Thomas, J L; Topp, E; Wilkes, G; Lapen, D R

    2013-06-15

    Human campylobacteriosis is the leading bacterial gastrointestinal illness in Canada; environmental transmission has been implicated in addition to transmission via consumption of contaminated food. Information about Campylobacter spp. occurrence at the watershed scale will enhance our understanding of the associated public health risks and the efficacy of source water protection strategies. The overriding purpose of this study is to provide a quantitative framework to assess and compare the relative public health significance of watershed microbial water quality associated with agricultural BMPs. A microbial monitoring program was expanded from fecal indicator analyses and Campylobacter spp. presence/absence tests to the development of a novel, 11-tube most probable number (MPN) method that targeted Campylobacter jejuni, Campylobacter coli, and Campylobacter lari. These three types of data were used to make inferences about theoretical risks in a watershed in which controlled tile drainage is widely practiced, an adjacent watershed with conventional (uncontrolled) tile drainage, and reference sites elsewhere in the same river basin. E. coli concentrations (MPN and plate count) in the controlled tile drainage watershed were statistically higher (2008-11), relative to the uncontrolled tile drainage watershed, but yearly variation was high as well. Escherichia coli loading for years 2008-11 combined were statistically higher in the controlled watershed, relative to the uncontrolled tile drainage watershed, but Campylobacter spp. loads for 2010-11 were generally higher for the uncontrolled tile drainage watershed (but not statistically significant). Using MPN data and a Bayesian modelling approach, higher mean Campylobacter spp. concentrations were found in the controlled tile drainage watershed relative to the uncontrolled tile drainage watershed (2010, 2011). A second-order quantitative microbial risk assessment (QMRA) was used, in a relative way, to identify differences in mean Campylobacter spp. infection risks among monitoring sites for a hypothetical exposure scenario. Greater relative mean risks were obtained for sites in the controlled tile drainage watershed than in the uncontrolled tile drainage watershed in each year of monitoring with pair-wise posterior probabilities exceeding 0.699, and the lowest relative mean risks were found at a downstream drinking water intake reference site. The second-order modelling approach was used to partition sources of uncertainty, which revealed that an adequate representation of the temporal variation in Campylobacter spp. concentrations for risk assessment was achieved with as few as 10 MPN data per site. This study demonstrates for the first time how QMRA can be implemented to evaluate, in a relative sense, the public health implications of controlled tile drainage on watershed-scale water quality. Crown Copyright © 2013. Published by Elsevier Ltd. All rights reserved.

  15. Transport pathways of nitrogen and phosphorus in tile-drained cranberry farms

    NASA Astrophysics Data System (ADS)

    Kennedy, C. D.; Alversion, N.; Jeranyama, P.; DeMoranville, C.; Sandler, H.; Caruso, F.

    2013-12-01

    Rapid, controlled drainage of cranberry farms is critical to optimizing production in Massachusetts, where approximately 1/3 of the industry's crop is produced. Relatively new to cranberry farming, tile drainage has been billed as a low-cost drainage management option for reducing crop disease and weed infestations. Despite its well documented agronomic benefits, tile drainage may exacerbate nutrient loss and promote eutrophication in nearby ponds receiving cranberry drainage waters. In this study, a monitoring program was established on a Massachusetts cranberry bed to quantify (1) mass loss of nitrogen and phosphorous via tile drainage to a perimeter ditch surrounding the cranberry bed, (2) the attenuation of N and P in the ditch prior to discharge from the cranberry bed, and (3) and the component contributions of preferential vs. matrix transport of N and P in tile drainage. A combination of compound weirs, acoustic-velocity meters, propeller-driven flow meters, and rain gauges were installed to quantify drainage management characteristics of the cranberry bed. Automatic samplers were also installed to collect water samples at each monitoring site (i.e., four tile drains, an irrigation pond, and a flume used to control ditch height) for analysis of N and P concentrations and hydrogen and oxygen stable isotope ratios to estimate nutrient loss and transport pathways. These data will be used to develop a mechanistic synthesis of nutrient cycling in tile-drained cranberry beds.

  16. A bipedal DNA motor that travels back and forth between two DNA origami tiles.

    PubMed

    Liber, Miran; Tomov, Toma E; Tsukanov, Roman; Berger, Yaron; Nir, Eyal

    2015-02-04

    In this work, the successful operation of a dynamic DNA device constructed from two DNA origami building blocks is reported. The device includes a bipedal walker that strides back and forth between the two origami tiles. Two different DNA origami tiles are first prepared separately; they are then joined together in a controlled manner by a set of DNA strands to form a stable track in high yield as confirmed by single-molecule fluorescence (SMF). Second, a bipedal DNA motor, initially attached to one of the two origami units and operated by sequential interaction with "fuel" and "antifuel" DNA strands, moves from one origami tile to another and then back again. The operational yield, measured by SMF, was similar to that of a motor operating on a similar track embedded in a single origami tile, confirming that the transfer across the junction from one tile to the other does not result in dissociation that is any more than that of steps on a single tile. These results demonstrate that moving parts can reliably travel from one origami unit to another, and it demonstrates the feasibility of dynamic DNA molecular machines that are made of more than a single origami building block. This study is a step toward the development of motors that can stride over micrometer distances. © 2014 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  17. Use of thin film transistor liquid crystal display (TFT-LCD) waste glass in the production of ceramic tiles.

    PubMed

    Lin, Kae-Long

    2007-09-05

    In this study, we employ the following operating conditions: varied pressure (25 kgf/cm(2)), sintering temperature (900-1200 degrees C), sintering time (6h), percentage of thin film transistor liquid crystal display (TFT-LCD) waste glass by weight (0-50%) and temperature rising at a rate of 5 degrees C/min, to fabricate clay tiles. The sintering characteristics of the clay blended with TFT-LCD waste glass tiles are examined to evaluate the feasibility of the reuse of TFT-LCD waste glass. TFT-LCD waste glass contains large amounts of glass. The TCLP leaching concentrations all met the ROC EPAs current regulatory thresholds. The addition of TFT-LCD waste glass to the mixture, increased the apparent weight loss. The incorporation of 50% TFT-LCD waste glass resulted in a significant increase in the porosity ratio of the specimens compared to the porosity ratio of the ceramic tile containing TFT-LCD waste glass. The main constituent in both the clay tile and the clay with TFT-LCD waste glass samples is quartz. Increasing the temperature resulted in an increase in the flexural strength and resistance to abrasion in the tiles. The porosity ratio decreases as shrinkage increases. The relation between the porosity ratio and the hardness of the tiles used in the study is also shown.

  18. Characterizing DNA Star-Tile-Based Nanostructures Using a Coarse-Grained Model.

    PubMed

    Schreck, John S; Romano, Flavio; Zimmer, Matthew H; Louis, Ard A; Doye, Jonathan P K

    2016-04-26

    We use oxDNA, a coarse-grained model of DNA at the nucleotide level, to simulate large nanoprisms that are composed of multi-arm star tiles, in which the size of bulge loops that have been incorporated into the tile design is used to control the flexibility of the tiles. The oxDNA model predicts equilibrium structures for several different nanoprism designs that are in excellent agreement with the experimental structures as measured by cryoTEM. In particular we reproduce the chiral twisting of the top and bottom faces of the nanoprisms, as the bulge sizes in these structures are varied due to the greater flexibility of larger bulges. We are also able to follow how the properties of the star tiles evolve as the prisms are assembled. Individual star tiles are very flexible, but their structures become increasingly well-defined and rigid as they are incorporated into larger assemblies. oxDNA also finds that the experimentally observed prisms are more stable than their inverted counterparts, but interestingly this preference for the arms of the tiles to bend in a given direction only emerges after they are part of larger assemblies. These results show the potential for oxDNA to provide detailed structural insight as well as to predict the properties of DNA nanostructures and hence to aid rational design in DNA nanotechnology.

  19. Supporting Students' Understanding of Linear Equations with One Variable Using Algebra Tiles

    ERIC Educational Resources Information Center

    Saraswati, Sari; Putri, Ratu Ilma Indra; Somakim

    2016-01-01

    This research aimed to describe how algebra tiles can support students' understanding of linear equations with one variable. This article is a part of a larger research on learning design of linear equations with one variable using algebra tiles combined with balancing method. Therefore, it will merely discuss one activity focused on how students…

  20. 76 FR 555 - Keystone Holdings, LLC and Compagnie de Saint-Gobain; Analysis of Proposed Agreement Containing...

    Federal Register 2010, 2011, 2012, 2013, 2014

    2011-01-05

    ... relating to the manufacture and sale of alumina wear tiles. To resolve the competitive concerns raised by... exclude Saint-Gobain's North American alumina wear tile business operated out of a facility in Latrobe... tile business in Latrobe or certain other assets owned or controlled by Saint-Gobain relating to the...

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