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Sample records for deposition microbial cascades

  1. Segregation of the Anodic Microbial Communities in a Microbial Fuel Cell Cascade

    PubMed Central

    Hodgson, Douglas M.; Smith, Ann; Dahale, Sonal; Stratford, James P.; Li, Jia V.; Grüning, André; Bushell, Michael E.; Marchesi, Julian R.; Avignone Rossa, C.

    2016-01-01

    Metabolic interactions within microbial communities are essential for the efficient degradation of complex organic compounds, and underpin natural phenomena driven by microorganisms, such as the recycling of carbon-, nitrogen-, and sulfur-containing molecules. These metabolic interactions ultimately determine the function, activity and stability of the community, and therefore their understanding would be essential to steer processes where microbial communities are involved. This is exploited in the design of microbial fuel cells (MFCs), bioelectrochemical devices that convert the chemical energy present in substrates into electrical energy through the metabolic activity of microorganisms, either single species or communities. In this work, we analyzed the evolution of the microbial community structure in a cascade of MFCs inoculated with an anaerobic microbial community and continuously fed with a complex medium. The analysis of the composition of the anodic communities revealed the establishment of different communities in the anodes of the hydraulically connected MFCs, with a decrease in the abundance of fermentative taxa and a concurrent increase in respiratory taxa along the cascade. The analysis of the metabolites in the anodic suspension showed a metabolic shift between the first and last MFC, confirming the segregation of the anodic communities. Those results suggest a metabolic interaction mechanism between the predominant fermentative bacteria at the first stages of the cascade and the anaerobic respiratory electrogenic population in the latter stages, which is reflected in the observed increase in power output. We show that our experimental system represents an ideal platform for optimization of processes where the degradation of complex substrates is involved, as well as a potential tool for the study of metabolic interactions in complex microbial communities. PMID:27242723

  2. Segregation of the Anodic Microbial Communities in a Microbial Fuel Cell Cascade.

    PubMed

    Hodgson, Douglas M; Smith, Ann; Dahale, Sonal; Stratford, James P; Li, Jia V; Grüning, André; Bushell, Michael E; Marchesi, Julian R; Avignone Rossa, C

    2016-01-01

    Metabolic interactions within microbial communities are essential for the efficient degradation of complex organic compounds, and underpin natural phenomena driven by microorganisms, such as the recycling of carbon-, nitrogen-, and sulfur-containing molecules. These metabolic interactions ultimately determine the function, activity and stability of the community, and therefore their understanding would be essential to steer processes where microbial communities are involved. This is exploited in the design of microbial fuel cells (MFCs), bioelectrochemical devices that convert the chemical energy present in substrates into electrical energy through the metabolic activity of microorganisms, either single species or communities. In this work, we analyzed the evolution of the microbial community structure in a cascade of MFCs inoculated with an anaerobic microbial community and continuously fed with a complex medium. The analysis of the composition of the anodic communities revealed the establishment of different communities in the anodes of the hydraulically connected MFCs, with a decrease in the abundance of fermentative taxa and a concurrent increase in respiratory taxa along the cascade. The analysis of the metabolites in the anodic suspension showed a metabolic shift between the first and last MFC, confirming the segregation of the anodic communities. Those results suggest a metabolic interaction mechanism between the predominant fermentative bacteria at the first stages of the cascade and the anaerobic respiratory electrogenic population in the latter stages, which is reflected in the observed increase in power output. We show that our experimental system represents an ideal platform for optimization of processes where the degradation of complex substrates is involved, as well as a potential tool for the study of metabolic interactions in complex microbial communities.

  3. Acid tolerance response (ATR) of microbial communities during the enhanced biohydrogen process via cascade acid stress.

    PubMed

    Lin, Xiaoqin; Xia, Yan; Yan, Qun; Shen, Wei; Zhao, Mingxing

    2014-03-01

    Enhanced biohydrogen production via cascade acid stress on microbial communities, structure patterns of the microbial communities revealed by PLFAs, and the succession of biohydrogen related species against cascade acid stress were all investigated. It was found that hydrogen production could be improved from 48.7 to 79.4mL/gVS after cascade acid stress. In addition, the Gram negative (G(-)) bacteria were found to be more tolerant to organic acids than those of the Gram positive (G(+)) bacteria, regardless of the dominance of G(+) bacteria within the microbial communities. Moreover, Clostridium butyricum, Clostridium aciditolerans and Azospira oryzae, were proved to be enriched, and then might play indispensable roles for the enhanced biohydrogen production after cascade acid stress, as which were responsible for the biohydrogen accumulation, acid tolerance and nitrogen removal, respectively.

  4. The Dry Aerosol Deposition Device (DADD): An Instrument for Depositing Microbial Aerosols onto Surfaces (PREPRINT)

    DTIC Science & Technology

    2008-12-01

    AFRL-RX-TY-TP-2008-4617 PREPRINT THE DRY AEROSOL DEPOSITION DEVICE (DADD): AN INSTRUMENT FOR DEPOSITING MICROBIAL AEROSOLS ONTO SURFACES... Deposition Device (DADD): 3  An Instrument for Depositing Microbial Aerosols onto Surfaces 4  5  Authors and affiliation 6  7  Heimbuch, B.K., Kinney...footprint, variable loading, etc.). We developed a Dry Aerosol 33  Deposition Device (DADD) that uses impaction rather than settling for loading surfaces

  5. Subsurface Microbial Ecosystems: A Photon Flux and a Metabolic Cascade

    NASA Astrophysics Data System (ADS)

    Petroff, Alexander P.; Tejera, Frank; Libchaber, Albert

    2017-01-01

    Mud is a porous medium containing a high density of diverse microorganisms. It is out of equilibrium as the energy from a photon flux is dissipated by a cascade of biochemical reactions, mediated by the metabolisms of the constituent organisms. Despite its complexity, microbes in nature self-organize into simple reproducible patterns. We present two experiments in which the dynamics of natural mud coming to steady state are observed and modeled. In the first, the oxygen gradient produced by cyanobacteria in an imposed light gradient is measured. In the second, a thin front of oxygen-consuming microbes forms at the penetration depth of oxygen and moves with the changing oxygen gradient.

  6. The Dry Aerosol Deposition Device (DADD): An Instrument for Depositing Microbial Aerosols onto Surfaces

    DTIC Science & Technology

    2008-12-01

    AFRL-RX-TY-TR-2008-4592 THE DRY AEROSOL DEPOSITION DEVICE (DADD): AN INSTRUMENT FOR DEPOSITING MICROBIAL AEROSOLS ONTO SURFACES...RESPONSIBLE PERSON 19b. TELEPHONE NUMBER (Include area code) 30-NOV-2008 Final Technical Report 01-OCT-2004 -- 02-OCT-2008 The Dry Aerosol Deposition ...Device (DADD): An Instrument for Depositing Microbial Aerosols Onto Surfaces FA4819-07-D-0001 99999F DODT 00 DODT0056 Heimbuch, Brian K.; Kinney

  7. Microbial shaping of wrinkle structures in siliciclastic deposits

    NASA Astrophysics Data System (ADS)

    Bosak, T.; Mariotti, G.; Pruss, S. B.; Perron, J.; O'Grady, M.

    2013-12-01

    Wrinkle structures are millimeter- to centimeter-scale elongated or reticulate sedimentary structures that resemble symmetric ripples. Sharp-crested and flat-topped wrinkle structures up to 1 cm wide occur on numerous bedding planes in the Neoproterozoic and Cambrian, as well as in some Archean and Phanerozoic siliciclastic deposits. Because similar, but unlithified structures occur in some modern, microbially-colonized sands, wrinkle structures are typically interpreted as microbially induced sedimentary structures. However, it is unclear if physical processes, such as the motion of suspended sand grains, can produce similar features in sand even before microbial colonization. We introduced mat fragments to the surface of silica sand in wave tanks and generated sharp-crested, flat-topped and pitted wrinkle structures. The abrasion of the sandy surface by rolling, low density, millimeter-size fragments of microbial mats produces wrinkle structures at extremely weak orbital velocities that cannot move sand grains in the absence of light particles. Wrinkle structures form in a few hours and can become colonized by microbial mats within weeks. Thus, wrinkle structures are patterns formed by microbially mediated sand motion at low orbital velocities in the absence of bioturbation. Once formed, wrinkle structures can be colonized and stabilized by microbial mats, but the shape of these mats does not dictate the shape of wrinkle structures. These experiments bolster the interpretation of wrinkle structures as morphological signatures of organic particles and early life in Archean and Proterozoic siliciclastic deposits.

  8. Cascade degradation of organic matters in brewery wastewater using a continuous stirred microbial electrochemical reactor and analysis of microbial communities

    PubMed Central

    Wang, Haiman; Qu, Youpeng; Li, Da; Ambuchi, John J.; He, Weihua; Zhou, Xiangtong; Liu, Jia; Feng, Yujie

    2016-01-01

    A continuous stirred microbial electrochemical reactor (CSMER), comprising of a complete mixing zone (CMZ) and microbial electrochemical zone (MEZ), was used for brewery wastewater treatment. The system realized 75.4 ± 5.7% of TCOD and 64.9 ± 4.9% of TSS when fed with brewery wastewater concomitantly achieving an average maximum power density of 304 ± 31 m W m−2. Cascade utilization of organic matters made the CSMER remove a wider range of substrates compared with a continuous stirred tank reactor (CSTR), in which process 79.1 ± 5.6% of soluble protein and 86.6 ± 2.2% of soluble carbohydrates were degraded by anaerobic digestion in the CMZ and short-chain volatile fatty acids were further decomposed and generated current in the MEZ. Co-existence of fermentative bacteria (Clostridium and Bacteroides, 19.7% and 5.0%), acetogenic bacteria (Syntrophobacter, 20.8%), methanogenic archaea (Methanosaeta and Methanobacterium, 40.3% and 38.4%) and exoelectrogens (Geobacter, 12.4%) as well as a clear spatial distribution and syntrophic interaction among them contributed to the cascade degradation process in CSMER. The CSMER shows great promise for practical wastewater treatment application due to high pre-hydrolysis and acidification rate, high energy recovery and low capital cost. PMID:27270788

  9. Effect of Increasing Nitrogen Deposition on Soil Microbial Communities

    SciTech Connect

    Xiao, Shengmu; Xue, Kai; He, Zhili; VanNostrand, Joy D.; Liu, Jianshe; Hobbie, Sarah E.; Reich, Peter B.; Zhou, Jizhong

    2010-05-17

    Increasing nitrogen deposition, increasing atmospheric CO2, and decreasing biodiversity are three main environmental changes occurring on a global scale. The BioCON (Biodiversity, CO2, and Nitrogen) ecological experiment site at the University of Minnesota's Cedar Creek Ecosystem Science Reserve started in 1997, to better understand how these changes would affect soil systems. To understand how increasing nitrogen deposition affects the microbial community diversity, heterogeneity, and functional structure impact soil microbial communities, 12 samples were collected from the BioCON plots in which nitrogenous fertilizer was added to simulate the effect of increasing nitrogen deposition and 12 samples from without added fertilizer. DNA from the 24 samples was extracted using a freeze-grind protocol, amplified, labeled with a fluorescent dye, and then hybridized to GeoChip, a functional gene array containing probes for genes involved in N, S and C cycling, metal resistance and organic contaminant degradation. Detrended correspondence analysis (DCA) of all genes detected was performed to analyze microbial community patterns. The first two axes accounted for 23.5percent of the total variation. The samples fell into two major groups: fertilized and non-fertilized, suggesting that nitrogenous fertilizer had a significant impact on soil microbial community structure and diversity. The functional gene numbers detected in fertilized samples was less that detected in non-fertilizer samples. Functional genes involving in the N cycling were mainly discussed.

  10. Microbial biosignatures in evaporite deposits: Evidence from Death Valley, California

    NASA Astrophysics Data System (ADS)

    Douglas, Susanne

    2004-01-01

    We report on a microstratigraphic layering of mineral types that correlates with layering of the microbial community. Environmental Scanning Electron Microscopy-Energy Dispersive X-ray Spectroscopy analysis showed that in the upper layers of the community, dominated by cyanobacteria, gypsum (CaSO 4·2H 2O) and bassanite (CaSO 4·H 2O) give way to rosickyite, a rare form of sulfur ( γ-sulfur; monoclinic symmetry), which is not thermodynamically predicted to be stable at Earth surface temperatures, reverting to the more common α-sulfur form (orthorhombic symmetry) and yet exists and is stably maintained within the endoevaporitic microbial community implying a biogenic role in its formation. This mineral may be formed by a cycle of microbial dissolution of gypsum to sulfide and re-oxidation of the sulfide to elemental sulfur (rosickyite) within a stable oxygen-sulfide gradient maintained by the organisms and appears specifically in association with the cyanobacterial layer. Cells in the lower region of the pigmented phototroph-dominated layers (i.e., purple and green bacteria) have associated strontianite (SrCO 3) and calcite in the form of fine-grained minerals deposited on the cell surfaces and within the extracellular polymers surrounding them. Knowledge of how microbial communities can affect the mineralogy of evaporite deposits on Earth can help us to identify potential markers of the past or present existence of life on extraterrestrial bodies bearing evidence of ancient seas or lakes.

  11. 7 CFR 504.2 - Fees for deposit and requisition of microbial cultures.

    Code of Federal Regulations, 2010 CFR

    2010-01-01

    ... 7 Agriculture 6 2010-01-01 2010-01-01 false Fees for deposit and requisition of microbial cultures... cultures. (a) Depositors of microbial cultures must pay a one-time $500 user fee for each culture deposited on or after November 1, 1983. (b) For cultures deposited on or after November 1, 1983,...

  12. 7 CFR 504.2 - Fees for deposit and requisition of microbial cultures.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... 7 Agriculture 6 2013-01-01 2013-01-01 false Fees for deposit and requisition of microbial cultures... cultures. (a) Depositors of microbial cultures must pay a one-time $500 user fee for each culture deposited on or after November 1, 1983. (b) For cultures deposited on or after November 1, 1983,...

  13. 7 CFR 504.2 - Fees for deposit and requisition of microbial cultures.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... 7 Agriculture 6 2014-01-01 2014-01-01 false Fees for deposit and requisition of microbial cultures... cultures. (a) Depositors of microbial cultures must pay a one-time $500 user fee for each culture deposited on or after November 1, 1983. (b) For cultures deposited on or after November 1, 1983,...

  14. 7 CFR 504.2 - Fees for deposit and requisition of microbial cultures.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... 7 Agriculture 6 2012-01-01 2012-01-01 false Fees for deposit and requisition of microbial cultures... cultures. (a) Depositors of microbial cultures must pay a one-time $500 user fee for each culture deposited on or after November 1, 1983. (b) For cultures deposited on or after November 1, 1983,...

  15. 7 CFR 504.2 - Fees for deposit and requisition of microbial cultures.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... 7 Agriculture 6 2011-01-01 2011-01-01 false Fees for deposit and requisition of microbial cultures... cultures. (a) Depositors of microbial cultures must pay a one-time $500 user fee for each culture deposited on or after November 1, 1983. (b) For cultures deposited on or after November 1, 1983,...

  16. Application of fluorescent microscopy and cascade filtration methods for analysis of soil microbial community

    NASA Astrophysics Data System (ADS)

    Ivanov, Konstantin; Pinchuk, Irina; Gorodnichev, Roman; Polyanskaya, Lubov

    2016-04-01

    Methods establishment of soil microbial cells size estimation called from the importance of current needs of research in microbial ecology. Some of the methods need to be improved for more detailed view of changes happen in microbiome of terrestrial ecosystems. The combination of traditional microscopy methods, fluorescence and filtration in addition to cutting-edge DNA analysis gives a wide range of the approaches for soil microbial ecologists in their research questions. In the most of the cases the bacterial cells size is limited of the natural conditions such as lack of nutrients or stress factors due to heterogeneity of soil system. In the samples of soils, lakes and rivers sediments, snow and rain water the bacterial cells were detected minimally of 0.2 microns. We established the combination of the cascade filtration and fluorescent microscopy for complex analysis of different terrestrial ecosystems and various soil types. Our modification based on the use of successively filtered soil suspension for collection of microbes by the membrane pores decrease. Combination with fluorescence microscopy and DNA analysis via FISH method gave the presentation of microbial interactions and review of ecological strategies of soil microorganisms. Humus horizons of primitive arctic soil were the most favorable for bacterial growth. Quantified biomass of soil bacteria depends on the dominance of cells with specific dimensions caused of stress factors. The average bacterial size of different soil varied from 0.23 to 0.38 microns, however in humus horizons of arctic soil we detected the contrast dominance of the bigger bacterial cells sized of 1.85 microns. Fungi in this case contributed to increase the availability of organic matter for bacteria because the fungal mycelium forms the appreciable part of microbial biomass of primitive arctic soil. The dominant content of bigger bacterial cells in forest and fallow soil as well as the opposite situation in arable soils caused

  17. Microbial release of sulphur ions from atmospheric pollution deposits

    SciTech Connect

    Killhan, K.; Wainwright, M.

    1981-12-01

    The surfaces of leaves of Acer pseudoplatanus growing in areas exposed to heavy atmospheric pollution are covered with atmospheric pollution deposits (APD). Using scanning electron microscopy, micro-organisms were seen to be growing in intimate association with these deposits. The deposits contained sufficient carbon and nitrogen to support growth of the fungus Fusarium solani in culture and in autoclaved and non-sterilized soils; and sufficient reduced sulphur for the in vitro growth of Thiobacillus thioparus. When T. thioparus and F. solani were grown in medium supplemented with APD as sole carbon and nitrogen sources, increases in the concentrations of soluble S/sub 2/O/sup 2 -//sub 3/; S/sub 4/O/sup 2 -//sub 6/ and SO/sup 2 -//sub 4/ resulted. Similar increases also occurred when APD was added to complete fungal growth medium. Increases in LiCl/sub 2/-extractable sulphur-ions also occurred in fresh soil amended with APD, and in autoclaved soils containing APD, and inoculated with spores of F. solani. Arylsulphatase activity increased in fresh soils and in soils autoclaved and inoculated with F. solani when APD was added; suggesting sulphur mineralization, as well as sulphur oxidation, in the release of sulphur ions from APD. We concluded that APD can support microbial growth in vitro and in soils when provided as sole carbon and sulphur source; and that micro-organisms can release sulphur ions from this complex substrate. Microbial release of sulphur ions from APD can account in part for the increased concentrations of sulphur ions in heavy atmospheric-polluted soils.

  18. Microbial release of sulphur ions from atmospheric pollution deposits

    SciTech Connect

    Killham, K.; Wainwright, M.

    1981-12-01

    The surface of leaves of Acer pseudoplatanus growing in areas exposed to heavy atmospheric pollution are covered with atmospheric pollution deposits (APD). Using scanning electric microscopy, micro-organisms were seen to be growing in intimate association with these deposits. The deposits contained sufficient carbon and nitrogen to support growth of the fungus Fusarium solani in culture and in autoclaved and non-sterilized soils; and sufficient reduced sulphur for in vitro growth of Thiobacillus thioparus. When T. thioparus and F. solani were grown in medium supplemented with APD as sole carbon and nitrogen sources, increases in the concentrations of soluble S/sub 2/O/sub 3//sup 2/ btw/sup -/ and; S/sub 4/O/sub 6//sup 2 -/ and SO/sub 4//sup 2 -/ resulted. Similar increases also occurred when APD was added to complete fungal growth medium. Increases in LiCl/sub 2/-extractable sulphur-ions also occurred is fresh soil amended with APD, and in autoclaved soils containing APD, and inoculated with spores of F. solani. Arylsulphatase activity increased in fresh soils and in soils autoclaved and inoculated with F. solani when APD was added; suggesting sulphur mineralization, as well as sulphur oxidation, in the release of sulphur ions from APD. We conclude that APD can support microbial growth in vitro and in soils when provided as sole carbon and sulphur source; and that micro-organisms can release sulphur ions from this complex substrate. Microbial release of sulphur ions from APD can account in part for the increased concentrations of sulphur ions in heavy atmospheric-polluted soils.

  19. Microbial Controls on Hot Spring Travertine Depositional Fabrics

    NASA Astrophysics Data System (ADS)

    Dwyer, S. E.; Fouke, B. W.; Miller, P. A.; Kandianis, M. T.

    2008-12-01

    In order to accurately identify and interpret the fossilization of bacteria in the geological record, a study of the three-dimensional crystalline architecture of CaCO3 (travertine) was completed at Mammoth Hot Springs (MHS) in Yellowstone National Park. We have identified the Apron and Channel Facies (71-65o C) as a site of active travertine precipitation that is fundamentally controlled by microbial activity. Structural and gross morphological analyses of these aragonite (CaCO3) travertine deposits have been completed in the context of rapid precipitation (< 5 mm/day) in unidirectional advection-dominated turbulent sheet flow. Significant changes in travertine depositional fabric were observed along the 1 to 3 m-long and 1 to 2 cm-deep primary flow path of the Apron and Channel Facies. The high-temperature (71 - 69o C) upstream portion of the Apron Channel Facies, which lies a few meters downstream from the vent source, is composed of filamentous microbial strands. Using our 16S rRNA gene sequence clone libraries from the Apron and Channel Facies, filamentous Aquificales pBB bacteria have been identified as the dominant microbes composing the filamentous strands, of which are separated by thin sheets of extra-cellular polysaccharide substances (EPS) a distance of 1 to 3mm. The EPS exhibits distinctive elliptical to circular voids that may result from water turbulence, gas escape, or other mechanisms. The EPS also acts as a binding agent for the filaments and stabilizes them into patterns that parallel the direction of spring water flow. The extent of aragonite needle precipitation on the exterior of intertwining microbial filaments increases from the downstream end of each filament upwards toward the vent source. Based on these attributes, we have termed this the fettuccini travertine fabric. Travertine deposited in the low-temperature (68 - 65o C) downstream portion of the Apron Channel Facies exhibits a capellini-like morphology arranged in a uniform tightly

  20. III-nitride quantum cascade detector grown by metal organic chemical vapor deposition

    SciTech Connect

    Song, Yu Huang, Tzu-Yung; Badami, Pranav; Gmachl, Claire; Bhat, Rajaram; Zah, Chung-En

    2014-11-03

    Quantum cascade (QC) detectors in the GaN/Al{sub x}Ga{sub 1−x}N material system grown by metal organic chemical vapor deposition are designed, fabricated, and characterized. Only two material compositions, i.e., GaN as wells and Al{sub 0.5}Ga{sub 0.5}N as barriers are used in the active layers. The QC detectors operates around 4 μm, with a peak responsivity of up to ∼100 μA/W and a detectivity of up to 10{sup 8} Jones at the background limited infrared performance temperature around 140 K.

  1. Soft deposits, the key site for microbial growth in drinking water distribution networks.

    PubMed

    Zacheus, O M; Lehtola, M J; Korhonen, L K; Martikainen, P J

    2001-05-01

    In this project we studied the microbiological quality of soft pipeline deposits removed from drinking water distribution networks during mechanical cleaning. Drinking water and deposit samples were collected from 16 drinking water distribution networks located at eight towns in different parts of Finland. Soft pipeline deposits were found to be the key site for microbial growth in the distribution networks. The microbial numbers in the soft deposits were significantly higher than numbers in running water. The highest microbial numbers were detected in the main deposit pushed ahead by the first swab. The deposits contained high numbers of heterotrophic bacteria, actinomycetes and fungi. Also coliform bacteria were often isolated from deposit samples. Manganese and copper in the deposits correlated negatively with the numbers of heterotrophic bacteria. After a year, the viable microbial numbers in the new deposits were almost as high as in the old deposits before the first mechanical cleaning. The bacterial biomass production was higher in the new than in the old deposits.

  2. Deposition and postdeposition mechanisms as possible drivers of microbial population variability in glacier ice.

    PubMed

    Xiang, Shu-Rong; Shang, Tian-Cui; Chen, Yong; Yao, Tan-Dong

    2009-11-01

    Glaciers accumulate airborne microorganisms year by year and thus are good archives of microbial communities and their relationship to climatic and environmental changes. Hypotheses have focused on two possible drivers of microbial community composition in glacier systems. One is aeolian deposition, in which the microbial load by aerosol, dust, and precipitation events directly determines the amount and composition of microbial species in glacier ice. The other is postdepositional selection, in which the metabolic activity in surface snow causes microbial community shifts in glacier ice. An additional possibility is that both processes occur simultaneously. Aeolian deposition initially establishes a microbial community in the ice, whereas postdeposition selection strengthens the deposition patterns of microorganisms with the development of tolerant species in surface snow, resulting in varying structures of microbial communities with depth. In this minireview, we examine these postulations through an analysis of physical-chemical and biological parameters from the Malan and Vostok ice cores, and the Kuytun 51 Glacial surface and deep snow. We discuss these and other recent results in the context of the hypothesized mechanisms driving microbial community succession in glaciers. We explore our current gaps in knowledge and point out future directions for research on microorganisms in glacial ecosystems.

  3. Warming and nitrogen deposition lessen microbial residue contribution to soil carbon pool.

    PubMed

    Liang, Chao; Balser, Teri C

    2012-01-01

    Microorganisms have a role as gatekeepers for terrestrial carbon fluxes, either causing its release to the atmosphere through their decomposition activities or preventing its release by stabilizing the carbon in a form that cannot be easily decomposed. Although research has focused on microbial sources of greenhouse gas production, somewhat limited attention has been paid to the microbial role in carbon sequestration. However, increasing numbers of reports indicate the importance of incorporating microbial-derived carbon into soil stable carbon pools. Here we investigate microbial residues in a California annual grassland after a continuous 9-year manipulation of three environmental factors (elevated CO(2), warming and nitrogen deposition), singly and in combination. Our results indicate that warming and nitrogen deposition can both alter the fraction of carbon derived from microbes in soils, though for two very different reasons. A reduction in microbial carbon contribution to stable carbon pools may have implications for our predictions of global change impacts on soil stored carbon.

  4. Effects of urban particulate deposition on microbial communities living in bryophytes: an experimental study.

    PubMed

    Meyer, C; Bernard, N; Moskura, M; Toussaint, M L; Denayer, F; Gilbert, D

    2010-10-01

    Our previous in situ study showed that bryophyte-microorganism complexes were affected by particulate atmospheric pollution. Here, the effect of urban particulate wet deposits on microbial communities living in bryophytes was studied under controlled conditions. An urban particulate solution was prepared with particles extracted from analyzer' filters and nebulized on bryophytes in treatments differing in frequency and quantity. The bryophytes did not accumulate metallic trace elements, which were present in very weak concentrations. However, in treated microcosms the total microbial biomass and the biomasses of cyanobacteria, active testate amoebae and fungi significantly decreased in response to the deposition of particles. These results confirm that microbial communities living in terrestrial bryophytes could be more sensitive indicators of atmospheric pollution than bryophytes. Moreover, they suggest that unicellular predators--such as testate amoebae--could be especially useful microbial indicators, since they seem to be both directly and indirectly affected by pollution.

  5. Deposition of biogenic iron minerals in a methane oxidizing microbial mat.

    PubMed

    Wrede, Christoph; Kokoschka, Sebastian; Dreier, Anne; Heller, Christina; Reitner, Joachim; Hoppert, Michael

    2013-01-01

    The syntrophic community between anaerobic methanotrophic archaea and sulfate reducing bacteria forms thick, black layers within multi-layered microbial mats in chimney-like carbonate concretions of methane seeps located in the Black Sea Crimean shelf. The microbial consortium conducts anaerobic oxidation of methane, which leads to the formation of mainly two biomineral by-products, calcium carbonates and iron sulfides, building up these chimneys. Iron sulfides are generated by the microbial reduction of oxidized sulfur compounds in the microbial mats. Here we show that sulfate reducing bacteria deposit biogenic iron sulfides extra- and intracellularly, the latter in magnetosome-like chains. These chains appear to be stable after cell lysis and tend to attach to cell debris within the microbial mat. The particles may be important nuclei for larger iron sulfide mineral aggregates.

  6. Magmatism and Epithermal Gold-Silver Deposits of the Southern Ancestral Cascade Arc, Western Nevada and Eastern California

    USGS Publications Warehouse

    John, David A.; du Bray, Edward A.; Henry, Christopher D.; Vikre, Peter

    2015-01-01

    Many epithermal gold-silver deposits are temporally and spatially associated with late Oligocene to Pliocene magmatism of the southern ancestral Cascade arc in western Nevada and eastern California. These deposits, which include both quartz-adularia (low- and intermediate-sulfidation; Comstock Lode, Tonopah, Bodie) and quartz-alunite (high-sulfidation; Goldfield, Paradise Peak) types, were major producers of gold and silver. Ancestral Cascade arc magmatism preceded that of the modern High Cascades arc and reflects subduction of the Farallon plate beneath North America. Ancestral arc magmatism began about 45 Ma, continued until about 3 Ma, and extended from near the Canada-United States border in Washington southward to about 250 km southeast of Reno, Nevada. The ancestral arc was split into northern and southern segments across an inferred tear in the subducting slab between Mount Shasta and Lassen Peak in northern California. The southern segment extends between 42°N in northern California and 37°N in western Nevada and was active from about 30 to 3 Ma. It is bounded on the east by the northeast edge of the Walker Lane. Ancestral arc volcanism represents an abrupt change in composition and style of magmatism relative to that in central Nevada. Large volume, caldera-forming, silicic ignimbrites associated with the 37 to 19 Ma ignimbrite flareup are dominant in central Nevada, whereas volcanic centers of the ancestral arc in western Nevada consist of andesitic stratovolcanoes and dacitic to rhyolitic lava domes that mostly formed between 25 and 4 Ma. Both ancestral arc and ignimbrite flareup magmatism resulted from rollback of the shallowly dipping slab that began about 45 Ma in northeast Nevada and migrated south-southwest with time. Most southern segment ancestral arc rocks have oxidized, high potassium, calc-alkaline compositions with silica contents ranging continuously from about 55 to 77 wt%. Most lavas are porphyritic and contain coarse plagioclase

  7. Microbial Potential for Ecosystem N Loss Is Increased by Experimental N Deposition

    PubMed Central

    Upchurch, Rima A.; Zak, Donald R.

    2016-01-01

    Fossil fuel combustion and fertilizer use has increased the amount of biologically available N entering terrestrial ecosystems. Nonetheless, our understanding of how anthropogenic N may alter the physiological mechanisms by which soil microorganisms cycle N in soil is still developing. Here, we applied shotgun metagenomics to a replicated long-term field experiment to determine how two decades of experimental N deposition, at a rate expected by mid-century, has affected the genetic potential of the soil microbial community to cycle N in soils. Experimental N deposition lead to a significant and persistent increase in functional assemblages mediating N cycle transformations associated with ecosystem N loss (i.e., denitrification and nitrification), whereas functional assemblages associated with N input and retention (i.e., N fixation and microbial N assimilation) were less positively affected. Furthermore, the abundance and composition of microbial taxa, as well as functional assemblages involved in housekeeping functions (i.e., DNA replication) were unaffected by experimental N deposition. Taken together, our results suggest that functional genes and gene pathways associated with ecosystem N loss have been favored by experimental N deposition, which may represent a genetic mechanism fostering increased N loss as anthropogenic N deposition increases in the future. PMID:27737013

  8. Formation of Deep Sea Umber Deposits Linked to Microbial Metal Oxidation at the South Atlantic Ridge

    NASA Astrophysics Data System (ADS)

    Peng, Xiaotong; Ta, Kaiwen; Chen, Shun; Zhang, Lijuan; Xu, Hengchao

    2015-04-01

    Umber deposits are important metalliferous deposits, which occur in off-axis half-graben structures at ancient and modern ocean floor. The genesis of umber deposits has remained controversial for several decades. Recently, microbial Fe(II) oxidation associated with low-temperature diffuse venting has been identified as a key process for the formation of umber deposits, but the exact biochemical mechanisms involved to the precipitation of Mn oxides and co-precipitation of Fe oxyhydroxides and Mn oxides in umber deposits still remain unknown. Here, we used nano secondary ion mass spectrometer, synchrotron-based X-ray absorption spectroscopy, electron microscopy, and molecular techniques to demonstrate the coexistence of two types of metal-oxidizing bacteria within deep-sea hydrothermal umber deposits at the South Atlantic Ridge, where we found unique spheroids composed of biogenic Fe oxyhydroxides and Mn oxides in the deposits. Our data suggest that Fe oxyhydroxides and Mn oxides are metabolic by-products of lithotrophic Fe(II)-oxidizing bacteria and heterotrophic Mn(II)-oxidizing bacteria, respectively. The hydrothermal vents fuel lithotrophic Fe(II)-oxidizing bacteria, which constitute a trophic base that may support the activities of heterotrophic Mn(II)-oxidizing bacteria. The biological origin of umber deposits underscore the importance of geomicrobiologcial interaction in triggering the formation of deep-sea deposits, with important implications for the generation of submarine Mn deposits and crusts.

  9. Geogenic Factors as Drivers of Microbial Community Diversity in Soils Overlying Polymetallic Deposits

    PubMed Central

    Zammit, Carla M.; Pohrib, Rebecca; Gregg, Adrienne L.; Wakelin, Steven A.

    2015-01-01

    This study shows that the geogenic factors landform, lithology, and underlying mineral deposits (expressed by elevated metal concentrations in overlying soils) are key drivers of microbial community diversity in naturally metal-rich Australian soils with different land uses, i.e., agriculture versus natural bushland. One hundred sixty-eight soil samples were obtained from two metal-rich provinces in Australia, i.e., the Fifield Au-Pt field (New South Wales) and the Hillside Cu-Au-U rare-earth-element (REE) deposit (South Australia). Soils were analyzed using three-domain multiplex terminal-restriction-fragment-length-polymorphism (M-TRFLP) and PhyloChip microarrays. Geogenic factors were determined using field-mapping techniques and analyses of >50 geochemical parameters. At Fifield, microbial communities differed significantly with geogenic factors and equally with land use (P < 0.05). At Hillside, communities in surface soils (0.03- to 0.2-m depth) differed significantly with landform and land use (P < 0.05). Communities in deeper soils (>0.2 m) differed significantly with lithology and mineral deposit (P < 0.05). Across both sites, elevated metal contents in soils overlying mineral deposits were selective for a range of bacterial taxa, most importantly Acidobacteria, Bacilli, Betaproteobacteria, and Epsilonproteobacteria. In conclusion, long-term geogenic factors can be just as important as land use in determining soil microbial community diversity. PMID:26341204

  10. Enhanced hydrogen production from waste activated sludge by cascade utilization of organic matter in microbial electrolysis cells.

    PubMed

    Lu, Lu; Xing, Defeng; Liu, Bingfeng; Ren, Nanqi

    2012-03-15

    Fermentative hydrogen production from waste activated sludge (WAS) has low H2 yield because WAS contains limited amounts of carbohydrate suitable for use by hydrogen-producing bacteria. Here, augmentation of hydrogen production from WAS by microbial electrolysis cells (MECs) was implemented. H2 yields of 3.89±0.39 mg-H2/g-DS (5.67±0.61 mg-H2/g-VSS) from raw WAS and 6.78±0.94 mg-H2/g-DS (15.08±1.41 mg-H2/g-VSS) from alkaline-pretreated WAS were obtained in the two-chamber MECs (TMECs). This was several times higher than yields obtained previously by fermentation. Single-chamber MECs (SMECs) with low internal resistance showed a H2 production rate that 13 times that of TMECs with similar H2 yield when alkaline-pretreated WAS was used. However, methanogenesis was detected after several batch cycles. A yield balance calculation revealed that carbohydrates were not the only substrates for electrohydrogenesis. Protein and its acidification products, such as volatile fatty acids are also responsible for a portion of H2 generation in MEC. Characterization of WAS in TMECs by three-dimensional excitation-emission matrix (EEM) fluorescence spectroscopy with parallel factor analysis indicated that electrohydrogenesis reacted on the extracellular polymeric substances and intracellular substances of WAS. Cascade utilization of organic matter in MECs increased hydrogen production from WAS. MECs showed high hydrogen yield from WAS, fewer H2 sinks, and insensitivity to temperature. Optimizing MEC configurations and operation conditions and improving the pretreatment processes of WAS are necessary before practical application can take place on a large scale.

  11. Nitrogen Deposition Reduces Decomposition Rates Through Shifts in Microbial Community Composition and Function

    NASA Astrophysics Data System (ADS)

    Waldrop, M.; Zak, D.; Sinsabaugh, R.

    2002-12-01

    Atmospheric nitrogen (N) deposition may alter soil biological activity in northern hardwood forests by repressing phenol oxidase enzyme activity and altering microbial community composition, thereby slowing decomposition and increasing the export of phenolic compounds. We tested this hypothesis by adding 13C-labelled cellobiose, vanillin, and catechol to control and N fertilized soils (30 and 80 kg ha-1) collected from three forests; two dominated by Acer Saccharum and one dominated by Quercus Alba and Quercus Velutina. While N deposition increased total microbial respiration, it decreased soil oxidative enzyme activities, resulting in slower degradation rates of all compounds, and larger DOC pools. This effect was larger in the oak forest, where fungi dominate C-cycling processes. DNA and 13C-phospolipid analyses showed that N addition altered the fungal community and reduced the activity of fungal and bacterial populations in soil, potentially explaining reduced soil enzyme activities and incomplete decomposition.

  12. Study on Microbial Deposition and Contamination onto Six Surfaces Commonly Used in Chemical and Microbiological Laboratories

    PubMed Central

    Tamburini, Elena; Donegà, Valentina; Marchetti, Maria Gabriella; Pedrini, Paola; Monticelli, Cecilia; Balbo, Andrea

    2015-01-01

    The worktops in both chemical and microbiological laboratories are the surfaces most vulnerable to damage and exposure to contamination by indoor pollutants. The rate at which particles are deposited on indoor surfaces is an important parameter to determine human exposure to airborne biological particles. In contrast to what has been established for inorganic pollutants, no limit has been set by law for microbial contamination in indoor air. To our knowledge, a comparative study on the effect of surfaces on the deposition of microbes has not been carried out. An evaluation of the microbial contamination of worktop materials could be of crucial importance, both for safety reasons and for the reliability of tests and experiments that need to be carried out in non-contaminated environments. The aim of this study was to evaluate the overall microbial contamination (fungi, mesophilic and psychrophilic bacteria, staphylococci) on six widely used worktop materials in laboratories (glass, stainless steel, fine porcelain stoneware, post-forming laminate, high-performing laminate and enamel steel) and to correlate it with the characteristics of the surfaces. After cleaning, the kinetics of microbial re-contamination were also evaluated for all surfaces. PMID:26193296

  13. Microbial community diversity associated with moonmilk deposits in a karstic cave system in Ireland

    NASA Astrophysics Data System (ADS)

    Rooney, D.; Hutchens, E.; Clipson, Nick; McDermott, Frank

    2009-04-01

    has been unaltered by human disturbance or practices. The aim of this study was to examine microbial community diversity associated with moonmilk deposits at Ballynamintra Cave, Ireland using automated ribosomal intergenic spacer analysis (ARISA). The results revealed considerable bacterial and fungal diversity associated with moonmilk in a karstic cave system, suggesting that the microbial community implicated in moonmilk formation may be more diverse than previously thought. These results suggest that microbes may have important functional roles in subterranean environments. Although the moonmilk in this study was largely comprised of calcite, microbial involvement in calcite precipitation could result in the bioavailability of a range of organic compounds for subsequent microbial metabolism. References: Baskar, S., Baskar, R., Mauclaire, L., and McKenzie, J.A. 2006. Microbially induced calcite precipitation in culture experiments: Possible origin for stalactites in Sahastradhara caves, Dehradun, India. Current Science 90: 58-64. Burford, E.P., Fomina, M., Gadd, G. 2003. Fungal involvement in bioweathering and biotrasformations of rocks and minerals. Min Mag 67(6):1172-1155. Engel, A.S., Stern, L.A., Bennett, P.C. 2004. Microbial contributions to cave formation: new insights into sulfuric acid speleogenesis. Geology 32(5): 369-372. Gadd, G.M. (2004). Mycotransformation of organic and inorganic substrates. Mycologist 18: 60-70. Northup, D., Barns, S.M., Yu, Laura, E., Spilde, M.N., Schelble, R.T., Dano, K.E., Crossey, L.J., Connolly, C.A., Boston, P.J., and Dahm, C.N. 2003. Diverse microbial communities inhabiting ferromanganese deposits in Lechuguilla and Spider Caves. Environmental Microbiology 5(11): 1071-1086.

  14. Taphonomy of Microbial Biosignatures in Spring Deposits: A Comparison of Modern, Quaternary, and Jurassic Examples

    NASA Astrophysics Data System (ADS)

    Potter-McIntyre, Sally L.; Williams, Jason; Phillips-Lander, Charity; O'Connell, Laura

    2017-03-01

    On Earth, microorganisms commonly enhance mineral precipitation and mediate mineralogical and chemical compositions of resulting deposits, particularly at spring systems. However, preservation of any type of microbial fossil or chemical or textural biosignature depends on the degree of alteration during diagenesis and factors such as exposure to diagenetic fluids. Little is known about the transformation of biosignatures during diagenesis over geologic time. Ten Mile Graben, Utah, USA, hosts a cold spring system that is an exceptional site for evaluation of diagenetic alteration of biosignatures because of the presence of modern springs with actively precipitating microbial mats and a series of progressively older tufa terraces (<400 ka) preserved in the area from the same spring system. A previously undescribed Jurassic laminated carbonate unit within the upper part of the Brushy Basin Member of the Morrison Formation is also exposed in Ten Mile Graben. This research characterizes the geology of these modern and Quaternary saline, Fe-undersaturated, circumneutral Ten Mile Graben cold springs and provides the first description in the literature of the Jurassic Brushy Basin Member of the Morrison Formation carbonate deposit. Taphonomy of microbial fossils is characterized by scanning electron microscopy (SEM). The data highlight two distinct methods of biosignature formation: (1) precipitation of minerals from an undersaturated solution owing to metabolic activity of the cells and (2) mineral precipitation on charged cell surfaces that produce distinctive microbial trace fossils. Although diagenesis can destroy or severely degrade biosignatures, particularly microbial fossils, some fossils and trace fossils are preserved because entombment by Ostwald ripening limits diagenetic alteration. Recognizing spring-fed, biogenic tufas is crucial for astrobiological research and the search for life on Mars.

  15. Microbial responses to long-term N deposition in a semiarid grassland.

    PubMed

    Stursova, Martina; Crenshaw, Chelsea L; Sinsabaugh, Robert L

    2006-01-01

    Nitrogen (N) enrichment of the biosphere is an expanding problem to which arid ecosystems may be particularly sensitive. In semiarid grasslands, scarce precipitation uncouples plant and microbial activities, and creates within the soil a spatial mosaic of rhizosphere and cyanobacterial crust communities. We investigated the impact of elevated N deposition on these soil microbial communities at a grama-dominated study site located incentral New Mexico (USA). The study plots were established in 1995 and receive 10 kg ha(-1) year(-1) of supplemental N in the form of NH(4)NO(3). Soil samples were collected in July 2004, following 2 years of severe drought, and again in March 2005 following a winter of record high precipitation. Soils were assayed for potential activities of 20 extracellular enzymes and N(2)O production. The rhizosphere and crust-associated soils had peptidase and peroxidase potentials that were extreme in relation to those of temperate soils. N addition enhanced glycosidase and phosphatase activities and depressed peptidase. In contrast to temperate forest soils, oxidative enzyme activity did not respond to N treatment. Across sampling dates, extracellular enzyme activity responses correlated with inorganic N concentrations. N(2)O generation did not vary significantly with soil cover or N treatment. Microbial responses to N deposition in this semiarid grassland were distinct from those of forest ecosystems and appear to be modulated by inorganic N accumulation, which is linked to precipitation patterns.

  16. Small landslide types and controls in glacial deposits: Lower Skagit river drainage, northern cascade range, Washington

    USGS Publications Warehouse

    Heller, P.L.

    1981-01-01

    Observations of 167 small, shallow landslides spanning a 22-year period on extensively logged slopes of Quaternary terraces in the lower Skagit and Baker Valleys, Washington, shows that there is a relationship between the common slope failures in this area and the slope angle, stratigraphy, and logging practices. Landslide frequency increases upvalley, as do mean annual precipitation and the frequency of perched water tables. Debris slides are most common, occur on steep slopes (>50%) composed of sand and gravel, and are most abundant in areas previously logged by the clear-cut method. Debris flows occur on shallower slopes (>30%) where the stratigraphy leads to perched water tables. Debris flows larger than 600 m2 in area appear to be unrelated to logging practices. Slump flows, described here for the first time, occur on similar slope angles and stratigraphic situations as debris flows. They differ mainly by the presence of semiconsolidated material, usually till, at the slide head. Where till is breached-commonly along road cuts-water infiltration is increased, saturating underlying fine-grained deposits, which then fail by debris flowage. Secondary slumping of till happens when the slope steepens during debris flow failure. Small landslides surrounding Lake Shannon may contribute up to 80% of the total particulate matter yield to the fluvial system at present, increasing lake sedimentation by a rate of 5 mm/yr. ?? 1981 Springer-Verlag New York Inc.

  17. Microbial methane in the shallow Paleozoic sediments and glacial deposits of Illinois, U.S.A.

    USGS Publications Warehouse

    Coleman, D.D.; Liu, Chao-Li; Riley, K.M.

    1988-01-01

    Methane formed by the microbial decomposition of buried organic matter is virtually ubiquitous in the groundwaters of Illinois. Chemical and carbon isotopic compositions are reported for gas samples collected from over 200 private and municipal water wells and from 39 small gas wells completed in glacial deposits (drift-gas wells). Carbon and hydrogen isotopic data for methane, carbon dioxide and water show that these gases were formed by the carbon dioxide reduction pathway, the same mechanism which has been previously shown to be responsible for microbial methane formation in the marine environment. The isotopic composition of methane in these samples can be closely correlated with the chemical composition of the gas and with water chemistry. The data are interpreted as indicating that isotopically very light methane is found in waters where the residence time of groundwater in the methanogenesis zone was very short relative to the methane production rate. ?? 1988.

  18. Microbial Catalysis of CaCO3: Biotic Response Controlling Travertine Deposition

    NASA Astrophysics Data System (ADS)

    Fouke, B. W.; Miller, P. A.; Dwyer, S.; Vescogni, H.; Kandianis, M. T.

    2008-12-01

    Microbial communities inhabiting drainage systems at Mammoth Hot Springs (MHS), Yellowstone National Park, survive increases in flow velocity by catalyzing CaCO3 mineralization (travertine). Our previous experiments have shown that the rate of travertine precipitation is controlled by microbial biomass (e.g. microbial cells and their extra-cellular polymeric substances [EPS]), thus creating a mechanism by which thermophilic microorganisms can survive environmental change and control system-level distributions of CaCO3 precipitation. The most striking example of this occurs in the Apron and Channel Facies of the MHS outflow system (T = 71-65o C; pH = 6-7). As the water flows across a short (1-3 m long) primary flow path, a steep geochemical gradient occurs in dissolved sulfide (125-0 μm) and simultaneously increasing dissolved oxygen. The spring water in the Apron and Channel Facies moves as a shallow (1-2 cm deep) unidirectional advection-dominated turbulent sheet flow that rapidly (< 5 mm/day) precipitates travertine (aragonite) on filamentous microbial mats dominated by Aquificales pBB and Sulfurihydrogenebium. The travertine grows as small (<10 μm) aragonite needle clusters on the surface of the microbial filaments and larger crystals (<100 μm) on the EPS. This forms the distinctive mm- to cm-scale "streamer" fabric common to globally distributed modern and ancient travertine. Fluctuations are common in the velocity of water that emerges from the vents at MHS. Under high flow conditions, it is advantageous for microbes to enhance CaCO3 crystal growth to permit lateral extension of their mats into areas of appropriate temperature, sulfide and oxygen conditions. The extremely rapid travertine precipitation rates (enhanced by the microbial biomass) directly track this extension and permit the associated lateral progradation of the Apron and Channel Facies travertine deposits. Conversely, under lower spring flow conditions, it is beneficial for microbes to

  19. Lava Cave Microbial Communities Within Mats and Secondary Mineral Deposits: Implications for Life Detection on Other Planets

    PubMed Central

    Melim, L.A.; Spilde, M.N.; Hathaway, J.J.M.; Garcia, M.G.; Moya, M.; Stone, F.D.; Boston, P.J.; Dapkevicius, M.L.N.E.; Riquelme, C.

    2011-01-01

    Abstract Lava caves contain a wealth of yellow, white, pink, tan, and gold-colored microbial mats; but in addition to these clearly biological mats, there are many secondary mineral deposits that are nonbiological in appearance. Secondary mineral deposits examined include an amorphous copper-silicate deposit (Hawai‘i) that is blue-green in color and contains reticulated and fuzzy filament morphologies. In the Azores, lava tubes contain iron-oxide formations, a soft ooze-like coating, and pink hexagons on basaltic glass, while gold-colored deposits are found in lava caves in New Mexico and Hawai‘i. A combination of scanning electron microscopy (SEM) and molecular techniques was used to analyze these communities. Molecular analyses of the microbial mats and secondary mineral deposits revealed a community that contains 14 phyla of bacteria across three locations: the Azores, New Mexico, and Hawai‘i. Similarities exist between bacterial phyla found in microbial mats and secondary minerals, but marked differences also occur, such as the lack of Actinobacteria in two-thirds of the secondary mineral deposits. The discovery that such deposits contain abundant life can help guide our detection of life on extraterrestrial bodies. Key Words: Biosignatures—Astrobiology—Bacteria—Caves—Life detection—Microbial mats. Astrobiology 11, 601–618. PMID:21879833

  20. Atmospheric Deposition and Surface-Water Chemistry in Mount Rainier and North Cascades National Parks, U.S.A., Water Years 2000 and 2005-2006

    USGS Publications Warehouse

    Clow, David W.; Campbell, Donald H.

    2008-01-01

    High-elevation aquatic ecosystems in Mount Rainier and North Cascades National Parks are highly sensitive to atmospheric deposition of nitrogen and sulfur. Thin, rocky soils promote fast hydrologic flushing rates during snowmelt and rain events, limiting the ability of basins to neutralize acidity and assimilate nitrogen deposited from the atmosphere. Potential effects of nitrogen and sulfur deposition include episodic or chronic acidification of terrestrial and aquatic ecosystems. In addition, nitrogen deposition can cause eutrophication of water bodies and changes in species composition in lakes and streams. This report documents results of a study performed by the U.S. Geological Survey, in cooperation with the National Park Service, of the effects of atmospheric deposition of nitrogen and sulfur on surface-water chemistry in Mount Rainier and North Cascades National Parks. Inorganic nitrogen in wet deposition was highest in the vicinity of North Cascades National Park, perhaps due to emissions from human sources and activities in the Puget Sound area. Sulfur in wet deposition was highest near the Pacific coast, reflecting the influence of marine aerosols. Dry deposition generally accounted for less than 30 percent of wet plus dry inorganic nitrogen and sulfur deposition, but occult deposition (primarily fog) represents a potentially substantial unmeasured component of total deposition. Trend analyses indicate inorganic nitrogen in wet deposition was relatively stable during 1986-2005, but sulfur in wet deposition declined substantially during that time, particularly after 2001, when emissions controls were added to a large powerplant in western Washington. Surface-water sulfate concentrations at the study site nearest the powerplant showed a statistically significant decrease between 2000 and 2005-06, but there was no statistically significant change in alkalinity, indicating a delayed response in surface-water alkalinity. Seasonal patterns in surface

  1. Enriching acid rock drainage related microbial communities from surface-deposited oil sands tailings.

    PubMed

    Dean, Courtney; Xiao, Yeyuan; Roberts, Deborah J

    2016-10-01

    Little is known about the microbial communities native to surface-deposited pyritic oil sands tailings, an environment where acid rock drainage (ARD) could occur. The goal of this study was to enrich sulfur-oxidizing organisms from these tailings and determine whether different populations exist at pH levels 7, 4.5, and 2.5. Using growth-based methods provides model organisms for use in the future to predict potential activities and limitations of these organisms and to develop possible control methods. Thiosulfate-fed enrichment cultures were monitored for approximately 1 year. The results showed that the enrichments at pH 4.5 and 7 were established quicker than at pH 2.5. Different microbial community structures were found among the 3 pH environments. The sulfur-oxidizing microorganisms identified were most closely related to Halothiobacillus neapolitanus, Achromobacter spp., and Curtobacterium spp. While microorganisms related to Chitinophagaceae and Acidocella spp. were identified as the only possible iron-oxidizing and -reducing microbes. These results contribute to the general knowledge of the relatively understudied microbial communities that exist in pyritic oil sands tailings and indicate these communities may have a potential role in ARD generation, which may have implications for future tailings management.

  2. Effects of soot deposition on particle dynamics and microbial processes in marine surface waters

    NASA Astrophysics Data System (ADS)

    Mari, Xavier; Lefèvre, Jérôme; Torréton, Jean-Pascal; Bettarel, Yvan; Pringault, Olivier; Rochelle-Newall, Emma; Marchesiello, Patrick; Menkes, Christophe; Rodier, Martine; Migon, Christophe; Motegi, Chiaki; Weinbauer, Markus G.; Legendre, Louis

    2014-07-01

    Large amounts of soot are continuously deposited on the global ocean. Even though significant concentrations of soot particles are found in marine waters, the effects of these aerosols on ocean ecosystems are currently unknown. Using a combination of in situ and experimental data, and results from an atmospheric transport model, we show that the deposition of soot particles from an oil-fired power plant impacted biogeochemical properties and the functioning of the pelagic ecosystem in tropical oligotrophic oceanic waters off New Caledonia. Deposition was followed by a major increase in the volume concentration of suspended particles, a change in the particle size spectra that resulted from a stimulation of aggregation processes, a 5% decrease in the concentration of dissolved organic carbon (DOC), a decreases of 33 and 23% in viral and free bacterial abundances, respectively, and a factor ~2 increase in the activity of particle-attached bacteria suggesting that soot introduced in the system favored bacterial growth. These patterns were confirmed by experiments with natural seawater conducted with both soot aerosols collected in the study area and standard diesel soot. The data suggest a strong impact of soot deposition on ocean surface particles, DOC, and microbial processes, at least near emission hot spots.

  3. Microbial lipid signatures and substrate potential of organic matter in permafrost deposits: Implications for future greenhouse gas production

    NASA Astrophysics Data System (ADS)

    Stapel, J. G.; Schirrmeister, L.; Overduin, P. P.; Wetterich, S.; Strauss, J.; Horsfield, B.; Mangelsdorf, K.

    2016-10-01

    A terrestrial permafrost core from Buor Khaya in northern Siberia comprising deposits of Late Pleistocene to Early Holocene age has been investigated to characterize living and past microbial communities with respect to modern and paleoclimate environmental conditions and to evaluate the potential of the organic matter (OM) for greenhouse gas generation. Microbial life markers—intact phospholipids and phospholipid fatty acids—are found throughout the entire core and indicate the presence of living microorganisms also in older permafrost deposits. Biomarkers for past microbial communities (branched and isoprenoid glycerol dialkyl glycerol tetraether as well as archaeol) reveal links between increased past microbial activity and intervals of high OM accumulation accompanied by increased OM quality presumably caused by local periods of moister and warmer environmental conditions. Concentrations of acetate as an excellent substrate for methanogenesis are used to assess the OM quality with respect to microbial degradability for greenhouse gas production. For this purpose two acetate pools are determined: the pore water acetate and OM bound acetate. Both depth profiles reveal similarities to the OM content and quality indicating a link between the amount of the stored OM and the potential to provide substrates for microbial greenhouse gas production. The data suggest that OM stored in the permafrost deposits is not much different in terms of OM quality than the fresh surface organic material. Considering the expected increase of permafrost thaw due to climate warming, this implies a potentially strong impact on greenhouse gas generation from permafrost areas in future with positive feedback on climate variation.

  4. Asynchronous responses of soil microbial community and understory plant community to simulated nitrogen deposition in a subtropical forest.

    PubMed

    Wu, Jianping; Liu, Wenfei; Fan, Houbao; Huang, Guomin; Wan, Songze; Yuan, Yinghong; Ji, Chunfeng

    2013-10-01

    Atmospheric nitrogen (N) deposition greatly affects ecosystem processes and properties. However, few studies have simultaneously examined the responses of both the above- and belowground communities to N deposition. Here, we investigated the effects of 8 years of simulated N deposition on soil microbial communities and plant diversity in a subtropical forest. The quantities of experimental N added (g of N m(-2) year(-1)) and treatment codes were 0 (N0, control), 6 (N1), 12 (N2), and 24 (N3). Phospholipid fatty acids (PLFAs) analysis was used to characterize the soil microbial community while plant diversity and coverage were determined in the permanent field plots. Microbial abundance was reduced by the N3 treatment, and plant species richness and coverage were reduced by both N2 and N3 treatments. Declines in plant species richness were associated with decreased abundance of arbuscular mycorrhizal fungi, increased bacterial stress index, and reduced soil pH. The plasticity of soil microbial community would be more related to the different responses among treatments when compared with plant community. These results indicate that long-term N deposition has greater effects on the understory plant community than on the soil microbial community and different conservation strategies should be considered.

  5. Lava cave microbial communities within mats and secondary mineral deposits: implications for life detection on other planets.

    PubMed

    Northup, D E; Melim, L A; Spilde, M N; Hathaway, J J M; Garcia, M G; Moya, M; Stone, F D; Boston, P J; Dapkevicius, M L N E; Riquelme, C

    2011-09-01

    Lava caves contain a wealth of yellow, white, pink, tan, and gold-colored microbial mats; but in addition to these clearly biological mats, there are many secondary mineral deposits that are nonbiological in appearance. Secondary mineral deposits examined include an amorphous copper-silicate deposit (Hawai'i) that is blue-green in color and contains reticulated and fuzzy filament morphologies. In the Azores, lava tubes contain iron-oxide formations, a soft ooze-like coating, and pink hexagons on basaltic glass, while gold-colored deposits are found in lava caves in New Mexico and Hawai'i. A combination of scanning electron microscopy (SEM) and molecular techniques was used to analyze these communities. Molecular analyses of the microbial mats and secondary mineral deposits revealed a community that contains 14 phyla of bacteria across three locations: the Azores, New Mexico, and Hawai'i. Similarities exist between bacterial phyla found in microbial mats and secondary minerals, but marked differences also occur, such as the lack of Actinobacteria in two-thirds of the secondary mineral deposits. The discovery that such deposits contain abundant life can help guide our detection of life on extraterrestrial bodies.

  6. Linking microbial ultrastructure and physiology to iron depositional processes in deep sea hydrothermal environments

    NASA Astrophysics Data System (ADS)

    Chan, C. S.; Fleming, E. J.; Emerson, D.; Edwards, K. J.

    2008-12-01

    Clara S. Chan, Emily Fleming, David Emerson, Katrina J. Edwards Iron microbial mats have been discovered in a variety of deep-sea hydrothermal environments and are increasingly being recognized as more seafloor is explored. The predominant structures found in many of these mats are iron oxyhydroxide-rich filaments. One of the most common structures is a helical stalk bearing a resemblance to the twisted stalk of the terrestrial iron-oxidizing microbe, Gallionella ferruginea. While Gallionella has not been detected in, or isolated from, these mats microaerophilic iron-oxidizing, a stalk- forming bacterium, Mariprofundus ferrooxydans (PV-1 and related strains) has been isolated from mats at the Loihi seamount in Hawaii (Emerson et al. 2007, PLoS One 2(8): e667). Fossilized aggregates of iron filaments have been observed in the rock record (e.g. Little et al. 2004, Geomicrobiol. J. 21:415), and may represent ancient versions of these microbial mats. If this is shown to be true, such filaments would represent one of the few microfossil morphologies that can be linked to a specific microbial metabolism. We have used a combination of test tube culturing, microslide culturing, time lapse microscopy, and electron microscopy to study Mariprofundus stalk morphology and genesis and link these details to physiological responses to environmental chemistry. The goals include determining specific attributes of stalk morphology that can be used to determine the biogenicity of putative iron microfossils, and interpret the conditions of the depositional environment. Light microscopic observation of microslide cultures over the course of several days allowed for determination of bacterial response to developing oxygen and Fe(II) gradients. Once gradients have been established, given an abundant supply of oxygen, cells congregate in a band perpendicular to the gradient and stalks are formed, growing in the direction of increasing oxygen (and decreasing Fe) concentration. This

  7. Homogeneous Matrix Deposition on Dried Agar for MALDI Imaging Mass Spectrometry of Microbial Cultures

    NASA Astrophysics Data System (ADS)

    Hoffmann, Thomas; Dorrestein, Pieter C.

    2015-11-01

    Matrix deposition on agar-based microbial colonies for MALDI imaging mass spectrometry is often complicated by the complex media on which microbes are grown. This Application Note demonstrates how consecutive short spray pulses of a matrix solution can form an evenly closed matrix layer on dried agar. Compared with sieving dry matrix onto wet agar, this method supports analyte cocrystallization, which results in significantly more signals, higher signal-to-noise ratios, and improved ionization efficiency. The even matrix layer improves spot-to-spot precision of measured m/z values when using TOF mass spectrometers. With this technique, we established reproducible imaging mass spectrometry of myxobacterial cultures on nutrient-rich cultivation media, which was not possible with the sieving technique.

  8. Sedimentary Parameters Controlling Occurrence and Preservation of Microbial Mats in Siliciclastic Depositional Systems

    NASA Technical Reports Server (NTRS)

    Noffke, Nora; Knoll, Andrew H.

    2001-01-01

    Shallow-marine, siliciclastic depositional systems are governed by physical sedimentary processes. Mineral precipitation or penecontemporaneous cementation play minor roles. Today, coastal siliciclastic environments may be colonized by a variety of epibenthic, mat-forming cyanobacteria. Studies on microbial mats showed that they are not randomly distributed in modern tidal environments. Distribution and abundancy is mainly function of a particular sedimentary facies. Fine-grained sands composed of "clear" (translucent) quartz particles constitute preferred substrates for cyanobacteria. Mat-builders also favor sites characterized by moderate hydrodynamic flow regimes, which permit biomass enrichment and construction of mat fabrics without lethal burial of mat populations by fine sediments. A comparable facies relationship can be observed in ancient siliciclastic shelf successions from the terminal Neoproterozoic Nama Group, Namibia. Wrinkle structures that record microbial mats are present but sparsely distributed in mid- to inner shelf sandstones of the Nudaus Formation. The sporadic distribution of these structures reflects both the narrow ecological window that governs mat development and the distinctive taphonomic conditions needed to preserve the structures. These observations caution that statements about changing mat abundance across the Proterozoic-Cambrian boundary must be firmly rooted in paleoenvironmental and taphonomic analysis. Understanding the factors that influence the formation and preservation of microbial structures in siliciclastic regimes can facilitate exploration for biological signatures in Earth's oldest rocks. Moreover, insofar as these structures can be preserved on bedding surfaces and are not easily mimicked by physical processes, they constitute a set of biological markers that can be searched for on Mars by remotely controlled rovers.

  9. Investigating microbial colonization in actively forming hydrothermal deposits using thermocouple arrays

    NASA Astrophysics Data System (ADS)

    Tivey, M. K.; Reysenbach, A. L.; Hirsch, M.; Steinberg, J.; Flores, G. E.

    2010-12-01

    Investigations of microbial colonization of very young hydrothermal deposits were carried out in 2009 at hydrothermal vents in the Lau Basin (SW Pacific), and in Guaymas Basin, Gulf of California, with a test deployment at the Rainbow vent field on the Mid-Atlantic Ridge in 2008. Our method entailed razing active chimneys and placing arrays of temperature probes (8 titanium-encased probes with their tips placed within a titanium cage) over the active flow. The chimneys that grew back through each array, encasing the temperature probe tips, were recovered after 2 to 15 days, along with temperature records. Molecular phylogenetic methods are being used to reveal the members of the microbial communities that developed in each chimney of known age and thermal history. A total of 15 array deployments were made at 10 vents in 6 different vent fields. Similar morphology beehives (with porous fine-grained interiors and steep temperature gradients across the outermost more-consolidated “wall”) formed at 2 of the 3 vents in Guaymas Basin (in 2 and 5 days at one vent and 3 and 15 days at a second), and at one vent each in the Kilo Moana (in 3 days), Tahi Moana (in 2.5 days), and Tui Malila (in 3 and 8 days) vent fields in the Lau Basin. In contrast, open conduit, thin walled chimneys grew within arrays at the Mariner vent field, Lau Basin, at 3 different vents (in 3 days at one vent, in 3 and 11 days at a second vent, and in 13 days at a third vent). A lower temperature (<280C) diffuser/spire with a filamentous biofilm formed in 15 days in an array at a hydrocarbon-rich vent in the Guaymas Basin. A similar biofilm formed after 6 days within an array placed earlier at this same vent, with little mineralization. Preliminary diversity data from the 6 and 15 day Guaymas deployments show an increased diversity of bacteria with time with initial colonizers being primarily sulfur-oxidizing Epsilonproteobacteria, with members of the Aquificales and Deltaproteobacteria appearing

  10. Effect of microbial treatment on the prevention and removal of paraffin deposits on stainless steel surfaces.

    PubMed

    Xiao, Meng; Li, Wen-Hong; Lu, Mang; Zhang, Zhong-Zhi; Luo, Yi-Jing; Qiao, Wei; Sun, Shan-Shan; Zhong, Wei-Zhang; Zhang, Min

    2012-11-01

    In this study, biosurfactant-producing strain N2 and non-biosurfactant producing stain KB18 were used to investigate the effects of microbial treatment on the prevention and removal of paraffin deposits on stainless steel surfaces. Strain N2, with a biosurfactant production capacity, reduced the contact angle of stainless steel to 40.04°, and the corresponding adhesion work of aqueous phase was decreased by 26.5 mJ/m(2). By contrast, KB18 could only reduce the contact angle to 50.83°, with a corresponding 7.6 mJ/m(2) decrease in the aqueous phase work adhesion. The paraffin removal test showed that the paraffin removal efficiencies of strain N2 and KB18 were 79.0% and 61.2%, respectively. Interestingly, the N2 cells could attach on the surface of the oil droplets to inhibit droplets coalescence. These results indicate that biosurfactant-producing strains can alter the wettability of stainless steel and thus eliminate paraffin deposition.

  11. Electrical performance of low cost cathodes prepared by plasma sputtering deposition in microbial fuel cells.

    PubMed

    Lefebvre, Olivier; Tang, Zhe; Fung, Martin P H; Chua, Daniel H C; Chang, In Seop; Ng, How Y

    2012-01-15

    Microbial fuel cells (MFCs) could potentially be utilized for a variety of applications in the future from biosensors to wastewater treatment. However, the amount of costly platinum (Pt) used as a catalyst should be minimized via innovative deposition methods such as sputtering. In addition, alternative and low-cost catalysts, such as cobalt (Co), should be sought. In this study, ultra low Pt or Co cathodes (0.1 mg cm(-2)) were manufactured by plasma sputtering deposition and scanning electron micrographs revealed nano-clusters of metal catalyst in a porous structure favorable to the three-phase heterogeneous catalytic reaction. When operated in single-chamber air-cathode MFCs, sputtered-Co cathodes generated on average the same power as sputtered-Pt cathodes (0.27 mW cell(-1)) and only 27% less than conventional Pt-ink cathodes with a catalyst load 5 times higher (0.5 mg cm(-2)). Finally, microscopy and molecular analyses showed evidence of biocatalysis activity on metal-free cathodes.

  12. Evidence for microbial activity in the formation of carbonate-hosted Zn-Pb deposits

    NASA Astrophysics Data System (ADS)

    Kucha, H.; Raith, J.

    2009-04-01

    *Kucha H **Raith J *University of Mining and Metallurgy, Faculty of Geology, Geophysics and Environmental Protection, Mickiewicza 30, PL-30-059 Krakow, Poland. ** University of Leoben, Department of Applied Geosciences and Geophysics, A-8700 Leoben, Peter Tunner Str. 5, Austria Evidence for microbial activity in the formation of carbonate-hosted Zn-Pb deposits To date evaluation of bacterial processes in the formation of carbonate-hosted Zn-Pb deposits is largely based on sulphur isotope evidence. However, during a past few years, textural criteria, have been established, which support the bacterial origin of many of these deposits. This has received a strong support from micro-, and nano-textures of naturally growing bacterial films in a flooded tunnel within carbonates that host the Piquette Zn-Pb deposit (Druschel et al., 2002). Bacterial textures, micro- and nano textures found in carbonate-hosted Zn-Pb deposits are: i)wavy bacterial films up to a few mm thick to up to a few cm long composed of peloids, ii)semimassive agglomeration of peloids in the carbonate matrix, and iii)solitary peloids dispersed in the carbonate matrix. Peloids are usually composed of a distinct 50-90um core most often made up of Zn-bearing calcite surrounded by 30-60um thick dentate rim composed of ZnS. Etching of Zn-carbonate cores reveals 1 - 2um ZnS filaments, and numerous 15 to 90nm large ZnS nano-spheres (Kucha et al., 2005). In massive ore composite Zn-calcite - sphalerite peloids are entirely replaced by zinc sulphide, and form peloids ghosts within banded sulphide layers. Bacterially derived micro- and nano-textures have been observed in the following carbonate-hosted Zn-Pb deposits: 1)Irish-type Zn-Pb deposits. In the Navan deposit the basic sulphur is isotopically light bacteriogenic S (Fallick at al., 2001). This is corroborated by semimassive agglomerations of composite peloids (Zn-calcite-ZnS corona or ZnS core-melnikovite corona). Etching of Zn-calcite core reveals globular

  13. Characterization of early microbial communities on volcanic deposits along a vegetation gradient on the island of Miyake, Japan.

    PubMed

    Guo, Yong; Fujimura, Reiko; Sato, Yoshinori; Suda, Wataru; Kim, Seok-won; Oshima, Kenshiro; Hattori, Masahira; Kamijo, Takashi; Narisawa, Kazuhiko; Ohta, Hiroyuki

    2014-01-01

    The 2000 eruption of Mount Oyama on the island of Miyake (Miyake-jima) created a unique opportunity to study the early ecosystem development on newly exposed terrestrial substrates. In this study, bacterial and fungal communities on 9- and 11-year-old volcanic deposits at poorly to fully vegetation-recovered sites in Miyake-jima, Japan, were characterized by conventional culture-based methods and pyrosequencing of 16S rRNA and 18S rRNA genes. Despite the differences in the vegetation cover, the upper volcanic deposit layer samples displayed low among-site variation for chemical properties (pH, total organic carbon, and total nitrogen) and microbial population densities (total direct count and culturable count). Statistical analyses of pyrosequencing data revealed that the microbial communities of volcanic deposit samples were phylogenetically diverse, in spite of very low-carbon environmental conditions, and their diversity was comparable to that in the lower soil layer (buried soil) samples. Comparing with the microbial communities in buried soil, the volcanic deposit communities were characterized by the presence of Betaproteobacteria and Gammaproteobacteria as the main bacterial class, Deinococcus- Thermus as the minor bacterial phyla, and Ascomycota as the major fungal phyla. Multivariate analysis revealed that several bacterial families and fungal classes correlated positively or negatively with plant species.

  14. Characterization of Early Microbial Communities on Volcanic Deposits along a Vegetation Gradient on the Island of Miyake, Japan

    PubMed Central

    Guo, Yong; Fujimura, Reiko; Sato, Yoshinori; Suda, Wataru; Kim, Seok-won; Oshima, Kenshiro; Hattori, Masahira; Kamijo, Takashi; Narisawa, Kazuhiko; Ohta, Hiroyuki

    2014-01-01

    The 2000 eruption of Mount Oyama on the island of Miyake (Miyake-jima) created a unique opportunity to study the early ecosystem development on newly exposed terrestrial substrates. In this study, bacterial and fungal communities on 9- and 11-year-old volcanic deposits at poorly to fully vegetation-recovered sites in Miyake-jima, Japan, were characterized by conventional culture-based methods and pyrosequencing of 16S rRNA and 18S rRNA genes. Despite the differences in the vegetation cover, the upper volcanic deposit layer samples displayed low among-site variation for chemical properties (pH, total organic carbon, and total nitrogen) and microbial population densities (total direct count and culturable count). Statistical analyses of pyrosequencing data revealed that the microbial communities of volcanic deposit samples were phylogenetically diverse, in spite of very low-carbon environmental conditions, and their diversity was comparable to that in the lower soil layer (buried soil) samples. Comparing with the microbial communities in buried soil, the volcanic deposit communities were characterized by the presence of Betaproteobacteria and Gammaproteobacteria as the main bacterial class, Deinococcus- Thermus as the minor bacterial phyla, and Ascomycota as the major fungal phyla. Multivariate analysis revealed that several bacterial families and fungal classes correlated positively or negatively with plant species. PMID:24463576

  15. Comparison of the microbial diversity at different depths of the GISP2 Greenland ice core in relationship to deposition climates.

    PubMed

    Miteva, Vanya; Teacher, Catherine; Sowers, Todd; Brenchley, Jean

    2009-03-01

    This study presents comparative geochemical, microbiological and molecular analyses of Greenland GISP2 ice core samples representing different depths, ages, deposition climates, in situ temperatures, and gas and ionic compositions. Our goal was to determine whether specific organisms, preserved at different depths, correlate with past climate characteristics recorded chronologically in ice layers. Three clear ice samples were selected from 2495, 2545 and 2578 m to represent distinct climatic periods with milder (-45 degrees C), colder (-51 degrees C) and warmer (-39 degrees C) deposition temperatures, and two Marine Isotope Stages, MIS3 (2495 m) and MIS4 (2545 and 2578 m). Results showed higher microbial abundance in ice deposited during colder climates with higher in situ ion content. The constructed universal SSU rRNA gene clone libraries were dominated by Gram-positive sequences (55-65%), and had fewer Proteobacteria (6-9%) and Archaea (1%). The 2495 m library differed from the other two by being dominated by Actinobacteria (55%) rather than Firmicutes. Fungi were more prevalent in the colder climate (40%). For comparison, a library was constructed from an older silty ice sample (3044 m) possibly originating from underlying permafrost with different in situ characteristics (high temperature, high methane and higher cell numbers). It showed significantly different diversity not found in the clear ice libraries. The bacterial and fungal isolates from the clear ice samples were related to organisms originating from Asian deserts, marine aerosols and volcanic dust, suggesting these environments as sources of deposited microorganisms. The observed differences in microbial diversity patterns, especially with the 2495 m library, support the idea that local climate conditions and global atmospheric circulations at different time periods have influenced the origin and composition of the microbial populations preserved at different depths of Greenland ice. Further

  16. Atmospheric aerosol deposition influences marine microbial communities in oligotrophic surface waters of the western Pacific Ocean

    NASA Astrophysics Data System (ADS)

    Maki, Teruya; Ishikawa, Akira; Mastunaga, Tomoki; Pointing, Stephen B.; Saito, Yuuki; Kasai, Tomoaki; Watanabe, Koichi; Aoki, Kazuma; Horiuchi, Amane; Lee, Kevin C.; Hasegawa, Hiroshi; Iwasaka, Yasunobu

    2016-12-01

    Atmospheric aerosols contain particulates that are deposited to oceanic surface waters. These can represent a major source of nutrients, trace metals, and organic compounds for the marine environment. The Japan Sea and the western Pacific Ocean are particularly affected by aerosols due to the transport of desert dust and industrially derived particulate matter with aerodynamic diameter less than 2.5 μm (PM2.5) from continental Asia. We hypothesized that supplementing seawater with aerosol particulates would lead to measurable changes in surface water nutrient composition as well as shifts in the marine microbial community. Shipboard experiments in the Pacific Ocean involved the recovery of oligotrophic oceanic surface water and subsequent supplementation with aerosol particulates obtained from the nearby coastal mountains, to simulate marine particulate input in this region. Initial increases in nitrates due to the addition of aerosol particulates were followed by a decrease correlated with the increase in phytoplankton biomass, which was composed largely of Bacillariophyta (diatoms), including Pseudo-nitzschia and Chaetoceros species. This shift was accompanied by changes in the bacterial community, with apparent increases in the relative abundance of heterotrophic Rhodobacteraceae and Colwelliaceae in aerosol particulate treated seawater. Our findings provide empirical evidence revealing the impact of aerosol particulates on oceanic surface water microbiology by alleviating nitrogen limitation in the organisms.

  17. Nitrogen deposition and management practices increase soil microbial biomass carbon but decrease diversity in Moso bamboo plantations

    PubMed Central

    Li, Quan; Song, Xinzhang; Gu, Honghao; Gao, Fei

    2016-01-01

    Because microbial communities play a key role in carbon (C) and nitrogen (N) cycling, changes in the soil microbial community may directly affect ecosystem functioning. However, the effects of N deposition and management practices on soil microbes are still poorly understood. We studied the effects of these two factors on soil microbial biomass carbon (MBC) and community composition in Moso bamboo plantations using high-throughput sequencing of the 16S rRNA gene. Plantations under conventional (CM) or intensive management (IM) were subjected to one of four N treatments for 30 months. IM and N addition, both separately and in combination, significantly increased soil MBC while decreasing bacterial diversity. However, increases in soil MBC were inhibited when N addition exceeded 60 kg N∙ha−1∙yr−1. IM increased the relative abundances of Actinobacteria and Crenarchaeota but decreased that of Acidobacteria. N addition increased the relative abundances of Acidobacteria, Crenarchaeota, and Actinobacteria but decreased that of Proteobacteria. Soil bacterial diversity was significantly related to soil pH, C/N ratio, and nitrogen and available phosphorus content. Management practices exerted a greater influence over regulation of the soil MBC and microbial diversity compared to that of N deposition in Moso bamboo plantations. PMID:27302857

  18. Nitrogen deposition and management practices increase soil microbial biomass carbon but decrease diversity in Moso bamboo plantations

    NASA Astrophysics Data System (ADS)

    Li, Quan; Song, Xinzhang; Gu, Honghao; Gao, Fei

    2016-06-01

    Because microbial communities play a key role in carbon (C) and nitrogen (N) cycling, changes in the soil microbial community may directly affect ecosystem functioning. However, the effects of N deposition and management practices on soil microbes are still poorly understood. We studied the effects of these two factors on soil microbial biomass carbon (MBC) and community composition in Moso bamboo plantations using high-throughput sequencing of the 16S rRNA gene. Plantations under conventional (CM) or intensive management (IM) were subjected to one of four N treatments for 30 months. IM and N addition, both separately and in combination, significantly increased soil MBC while decreasing bacterial diversity. However, increases in soil MBC were inhibited when N addition exceeded 60 kg N•ha‑1•yr‑1. IM increased the relative abundances of Actinobacteria and Crenarchaeota but decreased that of Acidobacteria. N addition increased the relative abundances of Acidobacteria, Crenarchaeota, and Actinobacteria but decreased that of Proteobacteria. Soil bacterial diversity was significantly related to soil pH, C/N ratio, and nitrogen and available phosphorus content. Management practices exerted a greater influence over regulation of the soil MBC and microbial diversity compared to that of N deposition in Moso bamboo plantations.

  19. Environmental controls on coastal coarse aerosols: implications for microbial content and deposition in the near-shore environment.

    PubMed

    Dueker, M Elias; Weathers, Kathleen C; O'Mullan, Gregory D; Juhl, Andrew R; Uriarte, Maria

    2011-04-15

    Coarse aerosols (particle diameter (D(p)) > 2 μm) produced in coastal surf zones carry chemical and microbial content to shore, forming a connection between oceanic, atmospheric, and terrestrial systems that is potentially relevant to coastal ecology and human health. In this context, the effects of tidal height, wind speed, and fog on coastal coarse aerosols and microbial content were quantified on the southern coast of Maine, USA. Aerosols at this site displayed clear marine influence and had high concentrations of ecologically relevant nutrients. Coarse aerosol concentrations significantly increased with tidal height (i.e., decreasing distance from waterline), onshore wind speed, and fog presence. As onshore wind speeds rose above 3 m s(-1), the mean half-deposition distance of coarse aerosols increased to an observed maximum of 47.6 ± 10.9 m from the water's edge at wind speeds from 5.5-8 m s(-1). Tidal height and fog presence did not significantly influence total microbial aerosol concentrations but did have a significant effect on culturable microbial aerosol fallout. At low wind speeds, culturable microbial aerosols falling out near-shore decreased by half at a distance of only 1.7 ± 0.4 m from the water's edge, indicating that these microbes may be associated with large coarse aerosols with rapid settling rates.

  20. Soil erosion increases soil microbial activity at the depositional position of eroding slopes

    NASA Astrophysics Data System (ADS)

    Meng, Xu; Cardenas, Laura M.; Donovan, Neil; Zhang, Junling; Murray, Phil; Zhang, Fusuo; Dungait, Jennifer A. J.

    2016-04-01

    ) contents were greater at the bottom and foot slope positions. The biomarker PLFAs for Gram positive bacteria and fungi were relatively 13C-enriched, indicating the incorporation of C from Zea mays residues compared with 13C-depletion in biomarker PLFA in Actinobacteria indicating utilization of SOC. An average of 72% C incorporated by the all microbial groups was derived from SOC at the slope foot, suggesting a large amount of SOC was mineralized at the depositional position. We observed the highest emissions of N2O and CO2 from the incubated soils sampled from the bottom slope position. We conclude that the conditions in the depositional positions of eroding slopes can promote GHG emissions reducing the previously reported sink capacity of soil erosion. Quinton et al (2010) The impact of agricultural soil erosion on biogeochemical cycling. Nature Geoscience 3, 311 - 314.

  1. Microbial Nitrogen and Sulfur Cycles at the Playa and Playa-lake Deposits of White Sands National Monument, New Mexico

    NASA Astrophysics Data System (ADS)

    Glamoclija, M.; Fogel, M. L.; Steele, A.

    2011-12-01

    A deflationary basin, Alkali Flat, of White Sands National Monument holds active playas and a playa lake, which allows for an excellent comparison of these different (hyper)saline habitats. Playa lakes are commonly studied as extreme hypersaline environments, however from our data, less studied playa sediments and coarse selenite crystals showed to be more biologically challenging environments. The Flat contains dome structures composed of coarse selenites, an alternative newly discovered microbial habitat. A comparison of environmental physicochemical conditions and molecular biology was used to determine the characteristics of microbial habitats and communities and to decipher nodes of nitrogen and sulfur cycles. On Mars, the presence of sulfate rich playa deposits has been suggested for the deposits discovered by the Opportunity rover at Meridiani Planum. Recently, it has been suggested that the playa settings extended to a larger, Arabia Terra, zone of groundwater upwelling. The study of terrestrial analogue site with playa settings, such as Alkali Flat from New Mexico, provides an analogue system to explore and characterize the proposed habitable zones and their potential biosignatures. At White Sands, playa lake deposits held up to 55wt.% of water within the surface mirabilite crust, bottom layers composed of sulfates, clay, halite, and carbonates had less water. The lake deposits hold the only setting with reducing chemistry that was detected in the layers beneath the crust (with 3.42:1 ammonium (NH4) over nitric oxides (NO)). Playa sediments were 10 times drier than the playa lake deposits and had patchy surface crust of halite and gypsum. Selenite crystals were the driest among studied habitats (0.16wt.% H2O). Playa sediments and selenites contained 9.49 and 3.9 times more NO than NH4, suggesting importance of nitrification processes in these settings. Nitrogen fixation genes were detected only in playa lake deposits. A variety of ammonium oxidation genes

  2. Contributions of microbial activity and ash deposition to post-fire nitrogen availability in a pine savanna

    NASA Astrophysics Data System (ADS)

    Ficken, Cari D.; Wright, Justin P.

    2017-01-01

    Many ecosystems experience drastic changes to soil nutrient availability associated with fire, but the magnitude and duration of these changes are highly variable among vegetation and fire types. In pyrogenic pine savannas across the southeastern United States, pulses of soil inorganic nitrogen (N) occur in tandem with ecosystem-scale nutrient losses from prescribed burns. Despite the importance of this management tool for restoring and maintaining fire-dependent plant communities, the contributions of different mechanisms underlying fire-associated changes to soil N availability remain unclear. Pulses of N availability following fire have been hypothesized to occur through (1) changes to microbial cycling rates and (2) direct ash deposition. Here, we document fire-associated changes to N availability across the growing season in a longleaf pine savanna in North Carolina. To differentiate between possible mechanisms driving soil N pulses, we measured net microbial cycling rates and changes to soil δ15N before and after a burn. Our findings refute both proposed mechanisms: we found no evidence for changes in microbial activity, and limited evidence that ash deposition could account for the increase in ammonium availability to more than 5-25 times background levels. Consequently, we propose a third mechanism to explain post-fire patterns of soil N availability, namely that (3) changes to plant sink strength may contribute to ephemeral increases in soil N availability, and encourage future studies to explicitly test this mechanism.

  3. Microbial communities established on Mont Blanc summit with Saharan dust deposition

    NASA Astrophysics Data System (ADS)

    Chuvochina, M.; Alekhina, I.; Normand, P.; Petit, J. R.; Bulat, S.

    2009-04-01

    Dust originating from the Sahara desert can be uplifted during storms, transported across the Mediterranean towards the Alpine region and deposited during snowfalls. The microbes associated with dust particles can be involved in establishing microbiota in icy environments as well as affect ecosystem and human health. Our objective was to use a culture-free DNA-based approach to assess bacterial content and diversity and furthermore, to identify ‘icy' microbes which could be brought on the Mont Blanc (MtBl) summit with Saharan dust and became living in the snow. Saharan dust fallout on MtBl summit from one event (MB5, event June 2006) vs. control libraries and that from another event (May 2008) were collected in Grenoble (SD, 200 m a.s.l.) and at Col du Dome (MB-SD, 4250 m a.s.l.). Soil from Ksar Ghilane (SS, Saharan desert, Tunisia, March 2008) was taken for overall comparison as a possible source population. Fresh snow falling in Grenoble (85) was collected as example of diversity in this area. To assess the microbial diversity 16S rRNA gene libraries (v3-v5 region) were constructed for corresponding dust-snow samples (MB5, SS, SD, 85 and MB-SD) along with clear snow samples and several controls. For both MB5 and MB-SD samples full-gene technique was evoked in attempt to differentiate reproduced bacteria from damaged DNA. Before sequencing the clones were rybotyped. All clone libraries were distinct in community composition except for some single phylotypes (or closely related groups) overlap. Thus, clone libraries from two different events that were collected at Col du Dome area within 2 year interval (MB5 and MB-SD) were different in community composition except one of the abundant phylotype from MB-SD library (Geodermatophilus sp.) which was shared (98% sequence similarity) with single representative from MB-5 library. These bacteria are pigmented and radiation-resistant, so it could be an indicator of desert origin for our sequences. For MB5 library two

  4. The impact and significance of tephra deposition on a Holocene forest environment in the North Cascades, Washington, USA

    NASA Astrophysics Data System (ADS)

    Egan, Joanne; Fletcher, William J.; Allott, Tim E. H.; Lane, Christine S.; Blackford, Jeff J.; Clark, Douglas H.

    2016-04-01

    High-resolution palaeoecological analyses (stratigraphy, tephra geochemistry, radiocarbon dating, pollen and ordination) were used to reconstruct a Holocene vegetation history of a watershed in the Pacific Northwest of America to evaluate the effects and duration of tephra deposition on a forest environment and the significance of these effects compared to long-term trends. Three tephra deposits were detected and evaluated: MLF-T158 and MLC-T324 from the climactic eruption of Mount Mazama, MLC-T480 from a Late Pleistocene eruption of Mount Mazama and MLC-T485 from a Glacier Peak eruption. Records were examined from both the centre and fringe of the basin to elucidate regional and local effects. The significance of tephra impacts independent of underlying long-term trends was confirmed using partial redundancy analysis. Tephra deposition from the climactic eruption of Mount Mazama approximately 7600 cal. years BP caused a significant local impact, reflected in the fringe location by changes to open habitat vegetation (Cyperaceae and Poaceae) and changes in aquatic macrophytes (Myriophyllum spicatum, Potamogeton, Equisetum and the alga Pediastrum). There was no significant impact of the climactic Mazama tephra or other tephras detected on the pollen record of the central core. Changes in this core are potentially climate driven. Overall, significant tephra fall was demonstrated through high resolution analyses indicating a local effect on the terrestrial and aquatic environment, but there was no significant impact on the regional forest dependent of underlying environmental changes.

  5. Lipid composition and microbial diversity of carbonate crusts and mud volcano deposits in the sorokin trough, ne black sea

    NASA Astrophysics Data System (ADS)

    Stadnitskaia, A.; Abbas, B.; Baas, M.; Coolen, M.; Muyzer, G.; van Weering, T.; Ivanov, M.; Sinninghe Damsté, J.

    2003-04-01

    In order to identify prokaryotes involved in AOM, a combination of lipid biomarker analysis, compound-specific carbon isotopic measurements, and 16S rRNA gene sequences was used. Four methane-related carbonate crusts, pelagic sediments and mud volcanic deposits were collected from Odessa, NIOZ and Kazakov mud volcanoes investigated during the 11th Training Through Research expedition (2001) in the Sorokin Trough, NE Black Sea. Strongly depleted archaeal and bacterial SR lipids directly indicate an incorporation of methane-derived carbon into their biomass. Chemotaxonomic and isotopic data suggest that microbial diversities involved in AOM are different among examined carbonates and sediments. This was complementary confirmed by denaturing gradient gel electrophoresis (DGGE) using specific primers for archaea and bacteria. Evidently, this study has implications for identifying additional microbial assemblages involved in AOM subsequently inducing precipitation of carbonates in a various gas-venting environments.

  6. Constructing an Alpine Fault Paleoseismicity Record from Slumped Lacustrine Deposits in the Cascade River Valley, South Westland, New Zealand

    NASA Astrophysics Data System (ADS)

    Coffey, G.; Moy, C. M.; Toy, V. G.; Ohneiser, C.; Howarth, J. D.

    2014-12-01

    The Alpine Fault is a major structure in New Zealand capable of producing earthquakes of magnitude 7 or greater, which delineates the boundary between the Australian and Pacific plates. Paleoseismic records of these earthquakes indicate recurrence intervals of 300 - 400 years over the last 1,300 years. However, there are no pre-Holocene records. Documenting the late Pleistocene record of magnitude, timing, and frequency of earthquakes would significantly reduce uncertainty in hazard analyses. The tectonically complex Cascade River Valley follows the Southern Alpine Fault, where the fault dominantly accommodates strike-slip motion. Two ~7m outcrops of proglacial lacustrine silt are exposed along the river in which, deformed rhythmites bounded by planar laminated rhythmites have been identified. These exhibit a variety of fold geometries in outcrop and x-ray computed tomography (CT) scans, all of which show some degree of asymmetry. Initial radiocarbon ages of 14,400 and 13,300 14C yr BP have been obtained from terrestrial plant material isolated from samples near the base of one outcrop. Given the age range and laminae density, these dates suggest that the rhythmites are varves, but additional radiocarbon dates and CT-scans will be used to confirm this. The deformed horizons are interpreted to be seismites formed by slumping. Earthquake shaking triggers an increase in pore fluid pressure, which destabilises the sublacustrine slope causing failure and the release of silt into the sedimentary system. As silt is transported by downslope shear it is deformed in distinct layers. Displacement of volumes of silt also causes the formation of seiche waves that apply shear stress to lake floor sediments causing further deformation. Deviations in magnetic susceptibility and the declination of magnetic remanence observed underneath and within deformed horizons are interpreted to be a response of earthquake shaking. Data from these different proxies will be presented and

  7. Desiccation cracks in siliciclastic deposits: Microbial mat-related compared to abiotic sedimentary origin

    NASA Astrophysics Data System (ADS)

    Kovalchuk, Olga; Owttrim, George W.; Konhauser, Kurt O.; Gingras, Murray K.

    2017-01-01

    Siliciclastic sediment colonized by microbial mats yield a set of distinct sedimentary fabrics that are collectively called "mat-related structures (MRS)". In the rock record, versatile cracks are observed in biostabilized strata, but the mechanisms responsible for their formation remain debated. Microbially stabilized sediments produce desiccation cracks that serve as modern analogs for fossil microbial cracks. However, since both microbial mat shrinkage and clay shrinkage may contribute to the formation of these desiccation cracks, it is difficult to isolate the influence of the microbial mat on the resulting crack formation, distribution and morphology. To address this issue, we conducted a series of desiccation experiments that determine differences between microbially influenced desiccation cracks (i.e. biotic) and those formed in identical, but sterilized (i.e. abiotic) siliciclastic sediment. Three sediment mixtures were used: (1) very fine-sized sand, (2) mixed (ungraded) silt/clay, and (3) normally graded silt/clay. In all of the experiments, the water-rich microbial mat contracted substantially while drying, producing isolated pockets of shallow, but wide cracks, the distribution of which was controlled by heterogeneities in the mat structure and thickness variations of the mat. In the clay-poor substratum, the microbial mat was the only crack-forming mechanism, while in the clay-rich substrata (experiments 2 and 3) desiccation cracks were more strongly influenced by clay shrinkage. The abiotic clay-rich sediment produced a polygonal network of deep cracks intersecting at 90-120o junctions. In the biotic clay-rich experiments, the microbial mat modified these desiccation features by withstanding crack propagation or by producing curled-up crack polygon margins. Even though a microbial mat shrinks substantially with desiccation, its cohesive nature and heterogeneous distribution prevents the formation of a regular crack network, but its shallow penetration

  8. Hydrological and environmental conditions as key drivers for spatial and seasonal changes in PCDD/PCDF concentrations, transport and deposition along urban cascade reservoirs.

    PubMed

    Urbaniak, Magdalena; Skowron, Aleksandra; Zieliński, Marek; Zalewski, Maciej

    2012-09-01

    To investigate the drivers for transport and deposition of 17 2,3,7,8-substituted PCDDs/PCDFs along an urban river, water samples from five reservoirs located along the river course were collected in January and July 2008. The concentrations of 17 congeners of PCDD/PCDF were determined and compared to environmental - physical, chemical and biological - conditions. The obtained data revealed that the concentration of the sum of toxic PCDDs/PCDFs in water samples differ between reservoirs as well as between seasons, ranging from 12.04 pg L(-1) in UP (first in the cascade) to 1327.94 pg L(-1) in PR (last in the cascade) during winter of 2008; and from 34.94 pg L(-1) in UP to 1352.50 pg L(-1) in TR (next to last) in summer 2008. In comparison, water samples collected from the river had a concentration several times lower at the first two sites (sites no. 1 and 4) and no detectable values at the last three stations (sites no. 7, 8, 10). The obtained data demonstrated strong or moderate correlations between the sum of 17 PCDDs/PCDFs and TEQ in reservoir water samples and physical, chemical and biological conditions, such as: Mg(2+) (R=0.82; R=0.80, respectively), SO(4)(2-) (R=0.80; R=0.80, respectively), K(+) (R=0.80; R=0.80, respectively), Ca(2+) (R=0.67, R=0.70, respectively), OSM (R=0.63, R=0.70, respectively). In addition, the positive strong correlation between TEQ concentrations and the water temperature (R=0.63) and chlorophyll a content (R=0.90) was noted. The violent weather conditions occurred during the research season with periods of intensive storm events (up to 32 mm in mid July), and thus the increased river flow velocity (up to 0.45 m(3)s(-1)) could have a direct and indirect influence on PCDDs/PCDFs concentration through changes in the sedimentation/resuspension ratio and consequently in transport, deposition and degradation processes along the river/reservoirs.

  9. Microbial ooids and cortoids from the Lower Triassic (Spathian) Virgin Limestone, Nevada, USA: Evidence for an Early Triassic microbial bloom in shallow depositional environments

    NASA Astrophysics Data System (ADS)

    Woods, Adam D.

    2013-06-01

    Lower Triassic sedimentary rocks contain a variety of unusual facies and fabrics, with microbialites being a distinctive component of many carbonates deposited following the Permian-Triassic mass extinction. Coated grains are common in shallow water facies from the upper Lower Triassic (Spathian) Virgin Limestone (Moenkopi Formation) in southern Nevada, and were investigated in order to determine their origin. Petrographic analysis reveals that the majority of the coated grains found within the Virgin Limestone are micritic ooids with a concentric fabric, or with a homogenous fabric composed of dense, often cloudy micrite. In addition, asymmetric ooids, aggregate grains, and distorted ooids are also locally common in some oolitic units; low-Mg calcite ooids and bimineralic ooids composed of low-Mg calcite and dense, cloudy micrite are less commonly found, but are also documented from the Virgin Limestone. Cortoids (i.e., grains that are coated with constructive micrite envelopes) are a minor component of oolitic grainstones and packstones (typically 10-15% of the grains), although they may also comprise entire beds. The cortoids are coated with micrite similar to that which comprises the ooid cortices, and may be finely laminated or dense and cloudy in nature. The micrite ooids and constructive micrite envelopes are interpreted as microbial in origin based on the finely laminated or cloudy, dense nature of the micrite, as well as coatings that are uneven, or often of greater thickness on one side of elongate nuclei, such as bivalve shells or phylliod algae blades. The origin of the low-Mg calcite ooids and layers is less certain, but may also be microbial. The results of this study suggest that a microbial bloom occurred in shallow water environments, which was the result of 3 factors: (1) the unusual chemistry of Early Triassic oceans; (2) runoff of nutrient-rich waters, which enhanced microbialite growth; and, (3) wave agitation and warm waters that led to CO2

  10. Growth of ectomycorrhizal mycelia and composition of soil microbial communities in oak forest soils along a nitrogen deposition gradient.

    PubMed

    Nilsson, Lars Ola; Bååth, Erland; Falkengren-Grerup, Ursula; Wallander, Håkan

    2007-08-01

    Deciduous forests may respond differently from coniferous forests to the anthropogenic deposition of nitrogen (N). Since fungi, especially ectomycorrhizal (EM) fungi, are known to be negatively affected by N deposition, the effects of N deposition on the soil microbial community, total fungal biomass and mycelial growth of EM fungi were studied in oak-dominated deciduous forests along a nitrogen deposition gradient in southern Sweden. In-growth mesh bags were used to estimate the production of mycelia by EM fungi in 19 oak stands in the N deposition gradient, and the results were compared with nitrate leaching data obtained previously. Soil samples from 154 oak forest sites were analysed regarding the content of phospholipid fatty acids (PLFAs). Thirty PLFAs associated with microbes were analysed and the PLFA 18:2omega6,9 was used as an indicator to estimate the total fungal biomass. Higher N deposition (20 kg N ha(-1)y(-1) compared with 10 kg N ha(-1)y(-1)) tended to reduce EM mycelial growth. The total soil fungal biomass was not affected by N deposition or soil pH, while the PLFA 16:1omega5, a biomarker for arbuscular mycorrhizal (AM) fungi, was negatively affected by N deposition, but also positively correlated to soil pH. Other PLFAs positively affected by soil pH were, e.g., i14:0, a15:0, 16:1omega9, a17:0 and 18:1omega7, while some were negatively affected by pH, such as i15:0, 16:1omega7t, 10Me17:0 and cy19:0. In addition, N deposition had an effect on the PLFAs 16:1omega7c and 16:1omega9 (negatively) and cy19:0 (positively). The production of EM mycelia is probably more sensitive to N deposition than total fungal biomass according to the fungal biomarker PLFA 18:2omega6,9. Low amounts of EM mycelia covaried with increased nitrate leaching, suggesting that EM mycelia possibly play an important role in forest soil N retention at increased N input.

  11. Formation of secondary electron cascades in single-crystalline plasma-deposited diamond upon exposure to femtosecond x-ray pulses

    SciTech Connect

    Gabrysch, M.; Isberg, J.; Marklund, E.; Caleman, C.; Hajdu, J. |; Twitchen, D. J.; Rudati, J.; Emma, P. J.; Krejcik, P.; Schlarb, H.; Arthur, J.; Brennan, S.; Hastings, J.; Lindenberg, A. M. |; Falcone, R. W.; Tschentscher, T.; Moffat, K.; Bucksbaum, P. H.; Als-Nielsen, J.; Nelson, A. J.

    2008-03-15

    Secondary electron cascades were measured in high purity single-crystalline chemical vapor deposition (CVD) diamond, following exposure to ultrashort hard x-ray pulses (140 fs full width at half maximum, 8.9 keV energy) from the Sub-Picosecond Pulse Source at the Stanford Linear Accelerator Center. We report measurements of the pair creation energy and of drift mobility of carriers in two CVD diamond crystals. This was done for the first time using femtosecond x-ray excitation. Values for the average pair creation energy were found to be 12.17{+-}0.57 and 11.81{+-}0.59 eV for the two crystals, respectively. These values are in good agreement with recent theoretical predictions. The average drift mobility of carriers, obtained by the best fit to device simulations, was {mu}{sub h}=2750 cm{sup 2}/V s for holes and was {mu}{sub e}=2760 cm{sup 2}/V s for electrons. These mobility values represent lower bounds for charge mobilities due to possible polarization of the samples. The results demonstrate outstanding electric properties and the enormous potential of diamond in ultrafast x-ray detectors.

  12. The Effect of Local Topographic Unevenness on Contourite Paleo-Deposition Around Marine Capes: A Novel "Geostrophic Cascade" in Cape Suvero and Cape Cilento (Tyrrhenian Sea)

    NASA Astrophysics Data System (ADS)

    Salusti, E.; Chiocci, F. L.; Martorelli, E.; Falcini, F.

    2014-12-01

    Despite the fact that two neighboring headlands in the Italian Southern Tyrrhenian Sea, Cape Cilento and Cape Suvero, have rather similar morphology and contouring flows, their contourite drifts were recognized, respectively, upstream the Cape Cilento tip and downstream Cape Suvero tip. Such an intriguing difference is discussed in terms of paleo-sedimentary processes induced by the interaction between large scale marine current turbulence and seafloor morphology around a cape (Martorelli et al., 2010). However Martorelli's et al. model for contourite location - which allows only an upstream contourite location for this kind of capes - fails in trying to explain such a difference. We thus focus on the local effect of a topographic depression, viz. a landslide scar off Cape Suvero, on flows contouring a cape. By applying the classical conservation of marine water potential vorticity we find a steady cyclonic circulation over the scar, that generates a "geostrophic cascade" that affects contourite deposition and stability. All this intuitively reminds the current dynamics around the Galileo's Red Spot in Jupiter's atmosphere. We thus show that the application of the potential vorticity conservation can provide a novel theoretical tool for investigating sedimentary structures and their evolution.

  13. Effects of nitrogen deposition and cattle grazing on productivity, invasion impact, and soil microbial processes in a serpentine grassland

    NASA Astrophysics Data System (ADS)

    Pasari, J.; Hernandez, D.; Selmants, P. C.; Keck, D.

    2010-12-01

    In recent decades, human activities have vastly increased the amount of biologically available nitrogen (N) in the biosphere. The resulting increase in N availability has broadly affected ecosystems through increased productivity, changes in species composition, altered nutrient cycles, and increases in invasion by exotic plant species, especially in systems that were historically low in N. California serpentine grasslands are N-limited ecosystems historically dominated by native species including several threatened and endangered plants and animals. Cattle grazing has emerged as the primary tool for controlling the impact of nitrophilic exotic grasses whose increased abundance has paralleled the regional traffic-derived increase in atmospheric N deposition. We examined the interactive effects of cattle grazing and N deposition on plant community composition, productivity, invasion resistance, and microbial processes in the Bay Area's largest serpentine grassland to determine the efficacy of current management strategies as well as the biogeochemical consequences of exotic species invasion. In the first two years of the study, aboveground net primary productivity decreased in response to grazing and increased in response to nitrogen addition. However, contrary to our hypotheses the change in productivity was not due to an increase in exotic species cover as there was little overall effect of grazing or N addition on species composition. Microbial activity was more responsive to grazing and N. Potential net N mineralization rates increased with N addition, but were not affected by grazing. In contrast, soil respiration rates were inhibited by grazing, but were not affected by N addition; suggesting strong carbon-limitation of soil microbial activity, particularly under grazing. Site differences in soil depth and grazing intensity were often more important than treatment effects. We suspect that the unusually dry conditions in the first two growing seasons inhibited

  14. Phototrophs in high-iron-concentration microbial mats: physiological ecology of phototrophs in an iron-depositing hot spring

    NASA Technical Reports Server (NTRS)

    Pierson, B. K.; Parenteau, M. N.; Griffin, B. M.

    1999-01-01

    At Chocolate Pots Hot Springs in Yellowstone National Park the source waters have a pH near neutral, contain high concentrations of reduced iron, and lack sulfide. An iron formation that is associated with cyanobacterial mats is actively deposited. The uptake of [(14)C]bicarbonate was used to assess the impact of ferrous iron on photosynthesis in this environment. Photoautotrophy in some of the mats was stimulated by ferrous iron (1.0 mM). Microelectrodes were used to determine the impact of photosynthetic activity on the oxygen content and the pH in the mat and sediment microenvironments. Photosynthesis increased the oxygen concentration to 200% of air saturation levels in the top millimeter of the mats. The oxygen concentration decreased with depth and in the dark. Light-dependent increases in pH were observed. The penetration of light in the mats and in the sediments was determined. Visible radiation was rapidly attenuated in the top 2 mm of the iron-rich mats. Near-infrared radiation penetrated deeper. Iron was totally oxidized in the top few millimeters, but reduced iron was detected at greater depths. By increasing the pH and the oxygen concentration in the surface sediments, the cyanobacteria could potentially increase the rate of iron oxidation in situ. This high-iron-content hot spring provides a suitable model for studying the interactions of microbial photosynthesis and iron deposition and the role of photosynthesis in microbial iron cycling. This model may help clarify the potential role of photosynthesis in the deposition of Precambrian banded iron formations.

  15. Weathering of post-impact hydrothermal deposits from the Haughton impact structure: implications for microbial colonization and biosignature preservation.

    PubMed

    Izawa, M R M; Banerjee, Neil R; Osinski, G R; Flemming, R L; Parnell, J; Cockell, C S

    2011-01-01

    Meteorite impacts are among the very few processes common to all planetary bodies with solid surfaces. Among the effects of impact on water-bearing targets is the formation of post-impact hydrothermal systems and associated mineral deposits. The Haughton impact structure (Devon Island, Nunavut, Canada, 75.2 °N, 89.5 °W) hosts a variety of hydrothermal mineral deposits that preserve assemblages of primary hydrothermal minerals commonly associated with secondary oxidative/hydrous weathering products. Hydrothermal mineral deposits at Haughton include intra-breccia calcite-marcasite vugs, small intra-breccia calcite or quartz vugs, intra-breccia gypsum megacryst vugs, hydrothermal pipe structures and associated surface "gossans," banded Fe-oxyhydroxide deposits, and calcite and quartz veins and coatings in shattered target rocks. Of particular importance are sulfide-rich deposits and their associated assemblage of weathering products. Hydrothermal mineral assemblages were characterized structurally, texturally, and geochemically with X-ray diffraction, micro X-ray diffraction, optical and electron microscopy, and inductively coupled plasma atomic emission spectroscopy. Primary sulfides (marcasite and pyrite) are commonly associated with alteration minerals, including jarosite (K,Na,H(3)O)Fe(3)(SO(4))(2)(OH)(6), rozenite FeSO(4)·4(H(2)O), copiapite (Fe,Mg)Fe(4)(SO(4))(6)(OH)(2)·20(H(2)O), fibroferrite Fe(SO(4))(OH)·5(H(2)O), melanterite FeSO(4)·7(H(2)O), szomolnokite FeSO(4)·H(2)O, goethite α-FeO(OH), lepidocrocite γ-FeO(OH) and ferrihydrite Fe(2)O(3)·0.5(H(2)O). These alteration assemblages are consistent with geochemical conditions that were locally very different from the predominantly circumneutral, carbonate-buffered environment at Haughton. Mineral assemblages associated with primary hydrothermal activity, and the weathering products of such deposits, provide constraints on possible microbial activity in the post-impact environment. The initial period of

  16. [Microbial communities of ancient seeds derived from permanently frozen Pleistocene deposits].

    PubMed

    Stakhov, V L; Gubin, S V; Maksimovich, S V; Rebrikov, D V; Savilova, A M; Kochkina, G A; Ozerskaia, S M; Ivanushkina, N E; Vorob'eva, E A

    2008-01-01

    Microbial communities from the surface of ancient seeds of higher plants and embedding frozen material dated to the late Pleistocene (formed about 30 thousand years ago) were studied by various methods: scanning electron microscopy, epifluorescence microscopy, and inoculation of nutrient media, followed by identification of isolated cultures. Both prokaryotic and eukaryotic microorganisms were found on the surface of ancient seeds. The total quantity of bacterial cells determined by direct counting and dilution plating (CFU) for the samples of ancient seeds exceeded the value in the embedding frozen material by one to two orders of magnitude. This pattern was not maintained for mycelial fungi; their quantity in the embedding material was also rather high. A significant difference was revealed between the microbial communities of ancient seeds and embedding frozen material. These findings suggest that ancient plant seeds are a particular ecological niche for microorganisms existing in permafrost and require individual detailed study.

  17. Microbial community structure of hydrothermal deposits from geochemically different vent fields along the Mid-Atlantic Ridge

    USGS Publications Warehouse

    Flores, Gilberto E.; Campbell, James H.; Kirshtein, Julie D.; Meneghin, Jennifer; Podar, Mircea; Steinberg, Joshua I.; Seewald, Jeffrey S.; Tivey, Margaret Kingston; Voytek, Mary A.; Yang, Zamin K.; Reysenbach, Anna-Louise

    2011-01-01

    To evaluate the effects of local fluid geochemistry on microbial communities associated with active hydrothermal vent deposits, we examined the archaeal and bacterial communities of 12 samples collected from two very different vent fields: the basalt-hosted Lucky Strike (37°17'N, 32°16.3'W, depth 1600-1750m) and the ultramafic-hosted Rainbow (36°13'N, 33°54.1'W, depth 2270-2330m) vent fields along the Mid-Atlantic Ridge (MAR). Using multiplexed barcoded pyrosequencing of the variable region 4 (V4) of the 16S rRNA genes, we show statistically significant differences between the archaeal and bacterial communities associated with the different vent fields. Quantitative polymerase chain reaction (qPCR) assays of the functional gene diagnostic for methanogenesis (mcrA), as well as geochemical modelling to predict pore fluid chemistries within the deposits, support the pyrosequencing observations. Collectively, these results show that the less reduced, hydrogen-poor fluids at Lucky Strike limit colonization by strict anaerobes such as methanogens, and allow for hyperthermophilic microaerophiles, like Aeropyrum. In contrast, the hydrogen-rich reducing vent fluids at the ultramafic-influenced Rainbow vent field support the prevalence of methanogens and other hydrogen-oxidizing thermophiles at this site. These results demonstrate that biogeographical patterns of hydrothermal vent microorganisms are shaped in part by large scale geological and geochemical processes.

  18. A new type of shelf margin deposit: rigid microbial sheets and unconsolidated grainstones riddled with meter-scale cavities

    NASA Astrophysics Data System (ADS)

    de Wet, C. B.; Dickson, J. A. D.; Wood, R. A.; Gaswirth, S. B.; Frey, H. M.

    1999-10-01

    Middle Cambrian microbial limestone contains a network of unusual, predominantly horizontal cavities up to 2 m in length and 0. 5 m in height. The microbialite experienced rapid syndepositional lithification, but adjacent grainstone sediments remained unlithified during deposition. This juxtaposition contributed to sediment instability, resulting in fracturing and brecciation of the lithified microbialite while unconsolidated grainstones underwent slumping and injection into some cavities. Remaining space within the cavities was colonized by a series of encrustations: thin crusts (2-8 mm) of laminated algal mats, followed by several generations of calcified Renalcis-like cyanobacteria up to 45 mm thick. Remaining void space was partially filled by internal sediment, and then sequentially occluded by banded radiaxial fibrous calcite, herringbone calcite, and finally saddle dolomite cements. The radiaxial and herringbone calcite cements precipitated from porewaters derived from seawater that became anoxic through the breakdown of organic matter in the microbialite. Noteworthy is the presence of herringbone calcite cement, not as a seafloor precipitate, but as an early cavity fill. We propose that the unusual bedding-parallel fractures were caused by gravity collapse along a shallow platform margin. Coeval foreslope sediments show syndepositional slumping, faulting, and mass flow deposits. These redeposited sediments contain boulders of microbialite and grainstone of platform margin provenance.

  19. Microbial community structure of hydrothermal deposits from geochemically different vent fields along the Mid-Atlantic Ridge

    SciTech Connect

    Flores, Gilberto E; Campbell, James H; Kirshtein, Julie D; Meneghin, Jennifer; Podar, Mircea; Steinberg, Joshua; Seewald, Jeffrey S; Tivey, Margaret Kingston; Voytek, Mary A; Reysenbach, Anna-Louise; Yang, Zamin Koo

    2011-01-01

    To evaluate the effects of local fluid geochemistry on microbial communities associated with active hydrothermal vent deposits, we examined the archaeal and bacterial communities of 12 samples collected from two very different vent fields: the basalt-hosted Lucky Strike (37 17'N, 32 16.3'W, depth 1600-1750 m) and the ultramafic-hosted Rainbow (36 13'N, 33 54.1'W, depth 2270-2330 m) vent fields along the Mid-Atlantic Ridge (MAR). Using multiplexed barcoded pyrosequencing of the variable region 4 (V4) of the 16S rRNA genes, we show statistically significant differences between the archaeal and bacterial communities associated with the different vent fields. Quantitative polymerase chain reaction (qPCR) assays of the functional gene diagnostic for methanogenesis (mcrA), as well as geochemical modelling to predict pore fluid chemistries within the deposits, support the pyrosequencing observations. Collectively, these results show that the less reduced, hydrogen-poor fluids at Lucky Strike limit colonization by strict anaerobes such as methanogens, and allow for hyperthermophilic microaerophiles, like Aeropyrum. In contrast, the hydrogen-rich reducing vent fluids at the ultramafic-influenced Rainbow vent field support the prevalence of methanogens and other hydrogen-oxidizing thermophiles at this site. These results demonstrate that biogeographical patterns of hydrothermal vent microorganisms are shaped in part by large scale geological and geochemical processes.

  20. Stable isotopes in seafloor hydrothermal systems: Vent fluids, hydrothermal deposits, hydrothermal alteration, and microbial processes

    USGS Publications Warehouse

    Shanks, Wayne C.

    2001-01-01

    The recognition of abundant and widespread hydrothermal activity and associated unique life-forms on the ocean floor is one of the great scientific discoveries of the latter half of the twentieth century. Studies of seafloor hydrothermal processes have led to revolutions in understanding fluid convection and the cooling of the ocean crust, the chemical and isotopic mass balance of the oceans, the origin of stratiform and statabound massive-sulfide ore-deposits, the origin of greenstones and serpentinites, and the potential importance of the subseafloor biosphere. Stable isotope geochemistry has been a critical and definitive tool from the very beginning of the modern era of seafloor exploration.

  1. Microbial Paleontology, Mineralogy and Geochemistry of Modern and Ancient Thermal Spring Deposits and Their Recognition on the Early Earth and Mars"

    NASA Technical Reports Server (NTRS)

    Farmer, Jack D.

    2004-01-01

    The vision of this project was to improve our understanding of the processes by which microbiological information is captured and preserved in rapidly mineralizing sedimentary environments. Specifically, the research focused on the ways in which microbial mats and biofilms influence the sedimentology, geochemistry and paleontology of modem hydrothermal spring deposits in Yellowstone national Park and their ancient analogs. Toward that goal, we sought to understand how the preservation of fossil biosignatures is affected by 1) taphonomy- the natural degradation processes that affect an organism from the time of its death, until its discovery as a fossil and 2) diagenesis- longer-term, post-depositional processes, including cementation and matrix recrystallization, which collectively affect the mineral matrix that contains fossil biosignature information. Early objectives of this project included the development of observational frameworks (facies models) and methods (highly-integrated, interdisciplinary approaches) that could be used to explore for hydrothermal deposits in ancient terranes on Earth, and eventually on Mars.

  2. Extensive microbial mats and their influences on the erosional and depositional dynamics of a siliciclastic cold water environment (Lower Arenigian, Montagne Noire, France)

    NASA Astrophysics Data System (ADS)

    Noffke, N.

    2000-11-01

    Lower Arenigian (Ordovician) rocks of the Montagne Noire, France, represent a shallow-marine environment of a high latitude position along the northern margin of Gondwana. Within the weakly metamorphosed siliciclastics six depositional units were recognized: (1) outer shelf; (2) foreshore zone, below wave base; (3) foreshore zone, above wave base; (4) sand bars of shoreface zone; (5) intertidal deposits; and (6) lagoonal zone. Wrinkle structures and various other phenomena were mediated by coherent (cyano-)bacterial mats. The structures can be related to the different facies zones of the paleoenvironment. Whereas the muddy outer shelf, and the high-energetic sand bars were not overgrown by any mat-constructing microbial populations, fine sands of the foreshore zone, the tidal flats and lagoonal areas were widely colonized. Restriction of mats due to competition of space by endobenthic macroorganisms, or by grazers was low. The microbially induced structures are composed of organic material, pyrite, clay minerals (illite, chamsonite, chlorite), and chert. The minerals precipitated in situ during degradation of the organic layers by the activity of heterotrophic bacteria at low temperatures. Because the microorganisms formed a dense organic carpet covering extensive areas of the ancient sea-bottom, they influenced significantly the erosional and depositional dynamics of the sedimentary system of the local Arenigian. Biostabilization counteracted erosion, and baffling, trapping and binding enriched mineral particles. Additionally, the in situ formed minerals contributed to the total amount of sediment. The biotic influence lead to increased accumulation of sediment within the depositional area. The study shows that microbial mats of great extension occur within Phanerozoic siliciclastics of cold paleoclimate zones, and that preservation of the mat fabrics was possible. The significant mats influenced the local sedimentary system, an aspect scarcely taken into account

  3. Microbial ecology of á-Proteobacteria ammonia-oxidizers along a concentration gradient of dry atmospheric nitrogen deposition in the San Bernadino Mountain Range.

    NASA Astrophysics Data System (ADS)

    Jordan, F. L.; Fenn, M. E.; Stein, L. Y.

    2002-12-01

    The fate of atmospherically-deposited nitrogen from industrial pollution is of major concern in the montane ecosystems bordering the South Coast California Air Basin. Nitrogen deposition rates in the more exposed regions of the San Bernardino Mountains (SBM) are among the highest in North America often exceeding 40 kg ha-1 year-1 in throughfall deposition of nitrate and ammonium (Fenn and Poth, 1999). Forest ecosystems with elevated N deposition generally exhibit elevated accumulation of soil nitrate, leaching and runoff, elevated emissions of nitrogenous gases, increased nitrification, and decreased litter decomposition rates. The role of nitrifying microbial populations, especially those taxonomically associated with the beta-Proteobacteria ammonia-oxidizers (AOB), will provide insight into nitrogen-cycling in these extremely N-saturated environments. Using 16S ribosomal DNA-based molecular techniques (16S rDNA clone library construction and Restriction Fragment Length Polymorphism), we are comparing AOB community diversity at 3 different locations along a natural atmospheric N-deposition concentration gradient in the SBM: from high at Camp Paviaka (CP), medium at Strawberry Peak (SP) to low at Dogwood (DW). As observed for wet N-deposition systems on the east coast, we hypothesized a negative correlation between AOB community diversity, abundance and function with nitrogen loading in the dry N deposition system of SBM. Nitrification potentials determined for the 3 sites along the N-deposition gradient were in the order of CP less than SP less than DW. Preliminary results indicate no correlation between diversity of AOB and increased nitrogen loading. Shannon-Weiner diversity indices calculated for ammonia-oxidizer RFLP group units were 2.22, 2.66 and 1.80 for CP, SP and DW, respectively.

  4. ESEM Studies of Colloidal Sulfur Deposition in a Natural Microbial Community from a Cold Sulfide Spring Near Ancaster, Ontario, Canada

    NASA Technical Reports Server (NTRS)

    Douglas, S.; Douglas, D.

    2000-01-01

    We have used a relatively new microscopial technique, environmental scanning electron microscopy (ESEM), together with transmission electron microscopy (TEM) and light microscopy to investigate a unique microbial community from a temperate climate, cold sulfide spring near Ancaster, Ontario, Canada.

  5. Atmospheric deposition, water-quality, and sediment data for selected lakes in Mount Rainer, North Cascades, and Olympic National Parks, Washington, 2008-10

    USGS Publications Warehouse

    Sheibley, Rich W.; Foreman, James R.; Moran, Patrick W.; Swarzenski, Peter W.

    2012-01-01

    To evaluate the potential effect from atmospheric deposition of nitrogen to high-elevation lakes, the U.S. Geological Survey partnered with the National Park Service to develop a "critical load" of nitrogen for sediment diatoms. A critical load is defined as the level of a given pollutant (in this case, nitrogen) at which detrimental effects to a target endpoint (sediment diatoms) result. Because sediment diatoms are considered one of the "first responders" to ecosystem changes from nitrogen, they are a sensitive indicator for nitrogen deposition changes in natural areas. This report presents atmospheric deposition, water quality, sediment geochronology, and sediment diatom data collected from July 2008 through August 2010 in support of this effort.

  6. Anti-microbial surfaces: An approach for deposition of ZnO nanoparticles on PVA-Gelatin composite film by screen printing technique.

    PubMed

    Meshram, J V; Koli, V B; Phadatare, M R; Pawar, S H

    2017-04-01

    Initially micro-organisms get exposed to the surfaces, this demands development of anti-microbial surfaces to inhibit their proliferation. Therefore, herein, we attempt screen printing technique for development of PVA-GE/ZnO nanocomposite (PG/ZnO) films. The synthesis of PG/ZnO nanocomposite includes two steps as: (i) Coating of Zinc Oxide nanoparticles (ZnO NPs) by poly ethylene glycol in order to be compatible with organic counterparts. (ii) Deposition of coated nanoparticles on the PG film surface. The results suggest the enhancement in anti-microbial activity of PG/ZnO nanocomposite over pure ZnO NPs against both Gram positive Bacillus subtilis and Gram negative Escherichia coli from zone of inhibition. The uniformity in deposition is further confirmed by scanning electron microscopy (SEM) images. The phase identification of ZnO NPs and formation of PG/ZnO nanocomposite has been confirmed by X-ray diffraction (XRD) analysis and UV-vis spectroscopy (UV-vis). The Attenuated total reflection Spectroscopy (ATR) analysis indicates the ester bond between PVA and gelatin molecules. The thermal stability of nanocomposite is studied by thermogravimetric analysis (TGA) revealing increase in crystallinity due to ZnO NPs which could be utilized to inhibit the growth of micro-organisms. The tensile strength is found to be higher and percent elongation is double of PG/ZnO nanocomposite than PG composite film.

  7. Microbial diversity in deep-sea sediment from the cobalt-rich crust deposit region in the Pacific Ocean.

    PubMed

    Liao, Li; Xu, Xue-Wei; Jiang, Xia-Wei; Wang, Chun-Sheng; Zhang, Dong-Sheng; Ni, Jian-Yu; Wu, Min

    2011-12-01

    Cobalt-rich crusts are important metallic mineral resources with great economic potential, usually distributed on seamounts located in the Pacific Ocean. Microorganisms are believed to play a role in the formation of crusts as well as in metal cycling. To explore the microbial diversity related to cobalt-rich crusts, 16S ribosomal RNA gene clone libraries were constructed from three consecutive sediment layers. In total, 417 bacterial clones were obtained from three bacterial clone libraries, representing 17 distinct phylogenetic groups. Proteobacteria dominated in the bacterial communities, followed by Acidobacteria and Planctomycetes. Compared with high bacterial diversity, archaea showed a remarkably low diversity, with all 137 clones belonging to marine archaeal group I except one novel euryarchaeotal clone. The microbial communities were potentially involved in sulfur, nitrogen and metal cycling in the area of cobalt-rich crusts. Sulfur oxidation and metal oxidation were potentially major sources of energy for this ecosystem. This is the first reported investigation of microbial diversity in sediments associated with cobalt-rich crusts, and it casts fresh light on the microbial ecology of these important ecosystems.

  8. Characteristics, extent and origin of hydrothermal alteration at Mount Rainier Volcano, Cascades Arc, USA: Implications for debris-flow hazards and mineral deposits

    USGS Publications Warehouse

    John, D.A.; Sisson, T.W.; Breit, G.N.; Rye, R.O.; Vallance, J.W.

    2008-01-01

    Hydrothermal alteration at Mount Rainier waxed and waned over the 500,000-year episodic growth of the edifice. Hydrothermal minerals and their stable-isotope compositions in samples collected from outcrop and as clasts from Holocene debris-flow deposits identify three distinct hypogene argillic/advanced argillic hydrothermal environments: magmatic-hydrothermal, steam-heated, and magmatic steam (fumarolic), with minor superimposed supergene alteration. The 3.8??km3 Osceola Mudflow (5600??y BP) and coeval phreatomagmatic F tephra contain the highest temperature and most deeply formed hydrothermal minerals. Relatively deeply formed magmatic-hydrothermal alteration minerals and associations in clasts include quartz (residual silica), quartz-alunite, quartz-topaz, quartz-pyrophyllite, quartz-dickite/kaolinite, and quartz-illite (all with pyrite). Clasts of smectite-pyrite and steam-heated opal-alunite-kaolinite are also common in the Osceola Mudflow. In contrast, the Paradise lahar, formed by collapse of the summit or near-summit of the edifice at about the same time, contains only smectite-pyrite and near-surface steam-heated and fumarolic alteration minerals. Younger debris-flow deposits on the west side of the volcano (Round Pass and distal Electron Mudflows) contain only low-temperature smectite-pyrite assemblages, whereas the proximal Electron Mudflow and a < 100??y BP rock avalanche on Tahoma Glacier also contain magmatic-hydrothermal alteration minerals that are exposed in the avalanche headwall of Sunset Amphitheater, reflecting progressive incision into deeper near-conduit alteration products that formed at higher temperatures. The pre-Osceola Mudflow alteration geometry is inferred to have consisted of a narrow feeder zone of intense magmatic-hydrothermal alteration limited to near the conduit of the volcano, which graded outward to more widely distributed, but weak, smectite-pyrite alteration within 1??km of the edifice axis, developed chiefly in porous

  9. Effects of sulfate deposition on pore water dissolved organic carbon, nutrients, and microbial enzyme activities in a northern peatland

    EPA Science Inventory

    Export of dissolved organic carbon from lakes and streams has increased throughout Europe and North America over the past several decades. One possible cause is altered deposition chemistry; specifically, decreasing sulfate inputs leading to changes in ionic strength and dissolve...

  10. Organic geochemistry of endoevaporitic environments: Microbial diversity and lipid biomarkers from gypsum deposits at the E.S.S.A Salt Works, Guerrero Negro, Baja, Mexico

    NASA Astrophysics Data System (ADS)

    Vogel, M. B.; Des Marais, D. J.; Jahnke, L. L.; Turk, K. A.; Kubo, M. D.

    2006-12-01

    microbial populations and organic matter diagenesis. This locality is relevant to extremophile studies because it is a biological analogue for evaporite deposits recently discovered on Mars and constitutes a complex hypersaline ecosystem where extreme sulfate concentrations affect carbon and oxygen cycles.

  11. Characteristics, extent and origin of hydrothermal alteration at Mount Rainier Volcano, Cascades Arc, USA: Implications for debris-flow hazards and mineral deposits

    NASA Astrophysics Data System (ADS)

    John, David A.; Sisson, Thomas W.; Breit, George N.; Rye, Robert O.; Vallance, James W.

    2008-08-01

    Hydrothermal alteration at Mount Rainier waxed and waned over the 500,000-year episodic growth of the edifice. Hydrothermal minerals and their stable-isotope compositions in samples collected from outcrop and as clasts from Holocene debris-flow deposits identify three distinct hypogene argillic/advanced argillic hydrothermal environments: magmatic-hydrothermal, steam-heated, and magmatic steam (fumarolic), with minor superimposed supergene alteration. The 3.8 km 3 Osceola Mudflow (5600 y BP) and coeval phreatomagmatic F tephra contain the highest temperature and most deeply formed hydrothermal minerals. Relatively deeply formed magmatic-hydrothermal alteration minerals and associations in clasts include quartz (residual silica), quartz-alunite, quartz-topaz, quartz-pyrophyllite, quartz-dickite/kaolinite, and quartz-illite (all with pyrite). Clasts of smectite-pyrite and steam-heated opal-alunite-kaolinite are also common in the Osceola Mudflow. In contrast, the Paradise lahar, formed by collapse of the summit or near-summit of the edifice at about the same time, contains only smectite-pyrite and near-surface steam-heated and fumarolic alteration minerals. Younger debris-flow deposits on the west side of the volcano (Round Pass and distal Electron Mudflows) contain only low-temperature smectite-pyrite assemblages, whereas the proximal Electron Mudflow and a < 100 y BP rock avalanche on Tahoma Glacier also contain magmatic-hydrothermal alteration minerals that are exposed in the avalanche headwall of Sunset Amphitheater, reflecting progressive incision into deeper near-conduit alteration products that formed at higher temperatures. The pre-Osceola Mudflow alteration geometry is inferred to have consisted of a narrow feeder zone of intense magmatic-hydrothermal alteration limited to near the conduit of the volcano, which graded outward to more widely distributed, but weak, smectite-pyrite alteration within 1 km of the edifice axis, developed chiefly in porous breccias

  12. Deposition of Fe on graphite felt by thermal decomposition of Fe(CO)5 for effective cathodic preparation of microbial fuel cells.

    PubMed

    Wang, Peng; Lai, Bin; Li, Haoran; Du, Zhuwei

    2013-04-01

    In this paper, an efficient and cost-effective method to prepare cathodes for microbial fuel cells (MFCs) was developed. Fe(CO)5 was decomposed and Fe was deposited on graphite felts for cathodic preparation. The unmodified, Pt modified and Fe modified graphite felts were utilized as cathodes in MFCs and power generation was compared. The maximum power density of MFCs with unmodified, Pt modified and Fe modified cathodes were respectively 288, 866 and 925 mW/m3. The internal resistance of MFCs with unmodified, Pt modified and Fe modified cathodes were respectively 505, 384 and 278Ω. The results of multiple analyses confirmed that Fe on cathode was Fe2O3 and FeOOH and Fe(III) oxides as cathodic catalysts improved the electrochemical activity and promoted power generation. The greatest advantage of new method for cathodic preparation was the replacing manual brushing and Nafion solution and decreasing the cost.

  13. Relationships between microbial communities and environmental parameters at sites impacted by mining of volcanogenic massive sulfide deposits, Prince William Sound, Alaska

    USGS Publications Warehouse

    Foster, A.L.; Munk, L.; Koski, R.A.; Shanks, Wayne C.; Stillings, L.L.

    2008-01-01

    The relations among geochemical parameters and sediment microbial communities were examined at three shoreline sites in the Prince William Sound, Alaska, which display varying degrees of impact by acid-rock drainage (ARD) associated with historic mining of volcanogenic massive sulfide deposits. Microbial communities were examined using total fatty acid methyl esters (FAMEs), a class of compounds derived from lipids produced by eukaryotes and prokaryotes (bacteria and Archaea); standard extraction techniques detect FAMEs from both living (viable) and dead (non-viable) biomass, but do not detect Archaeal FAMEs. Biomass and diversity (as estimated by FAMEs) varied strongly as a function of position in the tidal zone, not by study site; subtidal muds, Fe oxyhydroxide undergoing biogenic reductive dissolution, and peat-rich intertidal sediment had the highest values. These estimates were lowest in acid-generating, intertidal zone sediment; if valid, the estimates suggest that only one or two bacterial species predominate in these communities, and/or that Archeal species are important members of the microbial community in this sediment. All samples were dominated by bacterial FAMEs (median value >90%). Samples with the highest absolute abundance of eukaryotic FAMEs were biogenic Fe oxyhydroxides from shallow freshwater pools (fungi) and subtidal muds (diatoms). Eukaryotic FAMEs were practically absent from low-pH, sulfide-rich intertidal zone sediments. The relative abundance of general microbial functional groups such as aerobes/anaerobes and gram(+)/gram(-) was not estimated due to severe inconsistency among the results obtained using several metrics reported in the literature. Principal component analyses (PCAs) were performed to investigate the relationship among samples as separate functions of water, sediment, and FAMEs data. PCAs based on water chemistry and FAMEs data resulted in similar relations among samples, whereas the PCA based on sediment chemistry

  14. Genotypic trait variation modifies effects of climate warming and nitrogen deposition on litter mass loss and microbial respiration.

    PubMed

    Hines, Jes; Reyes, Marta; Mozder, Thomas J; Gessner, Mark O

    2014-12-01

    Intraspecific variation in genotypically determined traits can influence ecosystem processes. Therefore, the impact of climate change on ecosystems may depend, in part, on the distribution of plant genotypes. Here we experimentally assess effects of climate warming and excess nitrogen supply on litter decomposition using 12 genotypes of a cosmopolitan foundation species collected across a 2100 km latitudinal gradient and grown in a common garden. Genotypically determined litter-chemistry traits varied substantially within and among geographic regions, which strongly affected decomposition and the magnitude of warming effects, as warming accelerated litter mass loss of high-nutrient, but not low-nutrient, genotypes. Although increased nitrogen supply alone had no effect on decomposition, it strongly accelerated litter mass loss of all genotypes when combined with warming. Rates of microbial respiration associated with the leaf litter showed nearly identical responses as litter mass loss. These results highlight the importance of interactive effects of environmental factors and suggest that loss or gain of genetic variation associated with key phenotypic traits can buffer, or exacerbate, the impact of global change on ecosystem process rates in the future.

  15. South Cascade Glacier bibliography

    SciTech Connect

    Fountain, A.G.; Fulk, M.A.

    1984-01-01

    South Cascade Glacier, in Washington State, resides in a well-defined basin with mainly unglacierized divides making it ideal for most glaciological and hydrological studies. This bibliography is divided into three cateogories: (1) studies done about South Cascade Glacier specifically; (2) studies that use data from South Cascade Glacier but do not focus on or give insight to the glacier itself; and (3) instrumentation studies and non-glacier projects including snow studies done in the basin. (ACR)

  16. Cascaded automatic target recognition (Cascaded ATR)

    NASA Astrophysics Data System (ADS)

    Walls, Bradley

    2010-04-01

    The global war on terror has plunged US and coalition forces into a battle space requiring the continuous adaptation of tactics and technologies to cope with an elusive enemy. As a result, technologies that enhance the intelligence, surveillance, and reconnaissance (ISR) mission making the warfighter more effective are experiencing increased interest. In this paper we show how a new generation of smart cameras built around foveated sensing makes possible a powerful ISR technique termed Cascaded ATR. Foveated sensing is an innovative optical concept in which a single aperture captures two distinct fields of view. In Cascaded ATR, foveated sensing is used to provide a coarse resolution, persistent surveillance, wide field of view (WFOV) detector to accomplish detection level perception. At the same time, within the foveated sensor, these detection locations are passed as a cue to a steerable, high fidelity, narrow field of view (NFOV) detector to perform recognition level perception. Two new ISR mission scenarios, utilizing Cascaded ATR, are proposed.

  17. Biotoxicity of Mars soils: 1. Dry deposition of analog soils on microbial colonies and survival under Martian conditions

    NASA Astrophysics Data System (ADS)

    Schuerger, Andrew C.; Golden, D. C.; Ming, Doug W.

    2012-11-01

    Six Mars analog soils were created to simulate a range of potentially biotoxic geochemistries relevant to the survival of terrestrial microorganisms on Mars, and included basalt-only (non-toxic control), salt, acidic, alkaline, aeolian, and perchlorate rich geochemistries. Experiments were designed to simulate the dry-deposition of Mars soils onto spacecraft surfaces during an active descent landing scenario with propellant engines. Six eubacteria were initially tested for tolerance to desiccation, and the spore-former Bacillus subtilis HA101 and non-spore former Enterococcus faecalis ATCC 29212 were identified to be strongly resistant (HA101) and moderately resistant (29212) to desiccation at 24 °C. Furthermore, tests with B. subtilis and E. faecalis demonstrated that at least 1 mm of Mars analog soil was required to fully attenuate the biocidal effects of a simulated Mars-normal equatorial UV flux. Biotoxicity experiments were conducted under simulated Martian conditions of 6.9 mbar, -10 °C, CO2-enriched anoxic atmosphere, and a simulated equatorial solar spectrum (200-1100 nm) with an optical depth of 0.1. For B. subtilis, the six analog soils were found, in general, to be of low biotoxicity with only the high salt and acidic soils exhibiting the capacity to inactivate a moderate number of spores (<1 log reductions) exposed 7 days to the soils under simulated Martian conditions. In contrast, the overall response of E. faecalis to the analog soils was more dramatic with between two and three orders of magnitude reductions in viable cells for most soils, and between six and seven orders of magnitude reductions observed for the high-salt soil. Results suggest that Mars soils are likely not to be overtly biotoxic to terrestrial microorganisms, and suggest that the soil geochemistries on Mars will not preclude the habitability of the Martian surface.

  18. Theory of cascade refrigeration

    NASA Astrophysics Data System (ADS)

    Quack, Hans H.

    2012-06-01

    The maximum difference between the warm and cold temperature of a refrigeration cycle is limited by properties of the refrigerant and/or losses associated with the transport of the refrigerant. For larger temperature differences, one has to arrange several refrigeration cycles "above" each other, each cycle spanning a certain temperature difference. This approach is called cascade refrigeration and has played an important role in the history of cryogenics. For a theory of cascade refrigeration it is helpful to define a general one-stage non-reversible refrigeration step and to visualize it within the temperature-entropy diagram. Then one can combine several one-stage cycles to a cascade. There exist two types of cascades: "Full" cascades, where all entropy gains of a lower stage are transferred to the next higher temperature stage, and "partial" cascades, where each single cycle goes up to ambient temperature, where a part of the entropy gain is removed, and only the rest of the entropy gain is transferred to the next higher temperature stage. In cryogenic refrigeration "partial" cascades are generally more efficient than "full" cascades.

  19. Quantum cascade laser investigations of CH4 and C2H2 interconversion in hydrocarbon/H2 gas mixtures during microwave plasma enhanced chemical vapor deposition of diamond

    NASA Astrophysics Data System (ADS)

    Ma, Jie; Cheesman, Andrew; Ashfold, Michael N. R.; Hay, Kenneth G.; Wright, Stephen; Langford, Nigel; Duxbury, Geoffrey; Mankelevich, Yuri A.

    2009-08-01

    CH4 and C2H2 molecules (and their interconversion) in hydrocarbon/rare gas/H2 gas mixtures in a microwave reactor used for plasma enhanced diamond chemical vapor deposition (CVD) have been investigated by line-of-sight infrared absorption spectroscopy in the wavenumber range of 1276.5-1273.1 cm-1 using a quantum cascade laser spectrometer. Parameters explored include process conditions [pressure, input power, source hydrocarbon, rare gas (Ar or Ne), input gas mixing ratio], height (z) above the substrate, and time (t) after addition of hydrocarbon to a pre-existing Ar/H2 plasma. The line integrated absorptions so obtained have been converted to species number densities by reference to the companion two-dimensional (r ,z) modeling of the CVD reactor described in Mankelevich et al. [J. Appl. Phys. 104, 113304 (2008)]. The gas temperature distribution within the reactor ensures that the measured absorptions are dominated by CH4 and C2H2 molecules in the cool periphery of the reactor. Nonetheless, the measurements prove to be of enormous value in testing, tensioning, and confirming the model predictions. Under standard process conditions, the study confirms that all hydrocarbon source gases investigated (methane, acetylene, ethane, propyne, propane, and butane) are converted into a mixture dominated by CH4 and C2H2. The interconversion between these two species is highly dependent on the local gas temperature and the H atom number density, and thus on position within the reactor. CH4→C2H2 conversion occurs most efficiently in an annular shell around the central plasma (characterized by 1400

  20. Quantum cascade laser investigations of CH{sub 4} and C{sub 2}H{sub 2} interconversion in hydrocarbon/H{sub 2} gas mixtures during microwave plasma enhanced chemical vapor deposition of diamond

    SciTech Connect

    Ma Jie; Cheesman, Andrew; Ashfold, Michael N. R.; Hay, Kenneth G.; Wright, Stephen; Langford, Nigel; Duxbury, Geoffrey; Mankelevich, Yuri A.

    2009-08-01

    CH{sub 4} and C{sub 2}H{sub 2} molecules (and their interconversion) in hydrocarbon/rare gas/H{sub 2} gas mixtures in a microwave reactor used for plasma enhanced diamond chemical vapor deposition (CVD) have been investigated by line-of-sight infrared absorption spectroscopy in the wavenumber range of 1276.5-1273.1 cm{sup -1} using a quantum cascade laser spectrometer. Parameters explored include process conditions [pressure, input power, source hydrocarbon, rare gas (Ar or Ne), input gas mixing ratio], height (z) above the substrate, and time (t) after addition of hydrocarbon to a pre-existing Ar/H{sub 2} plasma. The line integrated absorptions so obtained have been converted to species number densities by reference to the companion two-dimensional (r,z) modeling of the CVD reactor described in Mankelevich et al. [J. Appl. Phys. 104, 113304 (2008)]. The gas temperature distribution within the reactor ensures that the measured absorptions are dominated by CH{sub 4} and C{sub 2}H{sub 2} molecules in the cool periphery of the reactor. Nonetheless, the measurements prove to be of enormous value in testing, tensioning, and confirming the model predictions. Under standard process conditions, the study confirms that all hydrocarbon source gases investigated (methane, acetylene, ethane, propyne, propane, and butane) are converted into a mixture dominated by CH{sub 4} and C{sub 2}H{sub 2}. The interconversion between these two species is highly dependent on the local gas temperature and the H atom number density, and thus on position within the reactor. CH{sub 4}->C{sub 2}H{sub 2} conversion occurs most efficiently in an annular shell around the central plasma (characterized by 1400CH{sub 4} is favored in the more distant regions where T{sub gas}<1400 K. Analysis of the multistep interconversion mechanism reveals substantial net consumption of H atoms accompanying the CH{sub 4}->C{sub 2}H{sub 2

  1. Homogeneous deposition-assisted synthesis of iron-nitrogen composites on graphene as highly efficient non-precious metal electrocatalysts for microbial fuel cell power generation

    NASA Astrophysics Data System (ADS)

    Liu, Yuan; Jin, Xiao-Jun; Dionysiou, Dionysios D.; Liu, Hong; Huang, Yu-Ming

    2015-03-01

    This work proposed a novel strategy for synthesizing highly efficient non-precious metal oxygen reduction reaction (ORR) electrocatalysts. Fe complexes were homogeneously deposited (HD) on graphene oxide through in situ hydrolysis of urea, followed by two-step pyrolysis under Ar and NH3 atmospheres, resulting in formation of Fe- and N-functionalized graphene (HD-FeN/G). The morphology, crystalline structure and elemental composition of HD-FeN/G were characterized. ORR activity was evaluated by using a rotary disk electrode (RDE) electrochemical system. HD improved the loading and distribution of the Fe-Nx composites on graphene. The ORR activity of the as-prepared HD-FeN/G in neutral medium was comparable to that of the state-of-the-art commercial Pt/C and significantly superior to a FeN/G counterpart produced via traditional approach. The ORR electron transfer number of HD-FeN/G was as high as 3.83 ± 0.08, which suggested that ORR catalysis proceeds through a four-electron pathway. HD-FeN/G was used as a cathodic electrocatalyst in microbial fuel cells (MFCs), and the resultant HD-FeN/G-MFC showed comparable voltage output and maximum power density to those of Pt/C-MFC. The HD-FeN/G-MFC achieved a maximum power density of 885 mW m-2, which was much higher than that of FeN/G-MFC (708 mW m-2). These findings demonstrate that HD-FeN/G produced through the novel synthesis strategy proposed in this work would be a good candidate as cathodic electrocatalyst in MFCs.

  2. 5. VIEW OF UPPER AND LOWER CASCADE BRIDGES AND CASCADE ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    5. VIEW OF UPPER AND LOWER CASCADE BRIDGES AND CASCADE CREEK FROM 100 YARDS WEST OF THE ROSTRUM (ROCK FORMATION ON SOUTH SIDE OF MERCED RIVER). HIGHWAY 140 IS AT BOTTOM OF FRAME. HIGHWAY 120, THE BIG OAK FLAT ROAD CROSSES FRAME JUST ABOVE CENTER. - Cascade Creek Bridge, Spanning Cascade Creek on New Big Oak Flat Road, Yosemite Village, Mariposa County, CA

  3. The nitrogen cascade

    SciTech Connect

    Galloway J.N.; Aber J.D.; Erisman J.W.; Seitzinger S.P.; Howarth R.W.; Cowling E.B.; Cosby B.J.

    2003-04-01

    Human production of food and energy is the dominant continental process that breaks the triple bond in molecular nitrogen (N{sub 2}) and creates reactive nitrogen (Nr) species. Circulation of anthropogenic Nr in Earth's atmosphere, hydrosphere, and biosphere has a wide variety of consequences, which are magnified with time as Nr moves along its biogeochemical pathway. The same atom of Nr can cause multiple effects in the atmosphere, in terrestrial ecosystems, in freshwater and marine systems, and on human health. We call this sequence of effects the nitrogen cascade. As the cascade progresses, the origin of Nr becomes unimportant. Reactive nitrogen does not cascade at the same rate through all environmental systems; some systems have the ability to accumulate Nr, which leads to lag times in the continuation of the cascade. These lags slow the cascade and result in Nr accumulation in certain reservoirs, which in turn can enhance the effects of Nr on that environment. The only way to eliminate Nr accumulation and stop the cascade is to convert Nr back to nonreactive N{sub 2}.

  4. Tracking Earthquake Cascades

    NASA Astrophysics Data System (ADS)

    Jordan, T. H.

    2011-12-01

    In assessing their risk to society, earthquakes are best characterized as cascades that can propagate from the natural environment into the socio-economic (built) environment. Strong earthquakes rarely occur as isolated events; they usually cluster in foreshock-mainshock-aftershock sequences, seismic swarms, and extended sequences of large earthquakes that propagate along major fault systems. These cascades are regulated by stress-mediated interactions among faults driven by tectonic loading. Within these cascades, each large event can itself cause a chain reaction in which the primary effects of faulting and ground shaking induce secondary effects, including tsunami, landslides, liquefaction, and set off destructive processes within the built environment, such as fires and radiation leakage from nuclear plants. Recent earthquakes have demonstrated how the socio-economic effects of large earthquakes can reverberate for many years. To reduce earthquake risk and improve the resiliency of communities to earthquake damage, society depends on five geotechnologies for tracking earthquake cascades: long-term probabilistic seismic hazard analysis (PSHA), short-term (operational) earthquake forecasting, earthquake early warning, tsunami warning, and the rapid production of post-event information for response and recovery (see figure). In this presentation, I describe how recent advances in earthquake system science are leading to improvements in this geotechnology pipeline. In particular, I will highlight the role of earthquake simulations in predicting strong ground motions and their secondary effects before and during earthquake cascades

  5. Hadron cascades produced by electromagnetic cascades

    SciTech Connect

    Nelson, W.R.; Jenkins, T.M.; Ranft, J.

    1986-12-01

    A method for calculating high energy hadron cascades induced by multi-GeV electron and photon beams is described. Using the EGS4 computer program, high energy photons in the EM shower are allowed to interact hadronically according to the vector meson dominance (VMD) model, facilitated by a Monte Carlo version of the dual multistring fragmentation model which is used in the hadron cascade code FLUKA. The results of this calculation compare very favorably with experimental data on hadron production in photon-proton collisions and on the hadron production by electron beams on targets (i.e., yields in secondary particle beam lines). Electron beam induced hadron star density contours are also presented and are compared with those produced by proton beams. This FLUKA-EGS4 coupling technique could find use in the design of secondary beams, in the determination high energy hadron source terms for shielding purposes, and in the estimation of induced radioactivity in targets, collimators and beam dumps.

  6. Resonant Cascaded Downconversion

    SciTech Connect

    Weedbrook, Christian; Parrett, Ben; Kheruntsyan, Karen; Drummond, Peter; Pooser, Raphael C; Pfister, Olivier

    2012-01-01

    We analyze an optical parametric oscillator (OPO) in which cascaded down-conversion occurs inside a cavity resonant for all modes but the initial pump. Due to the resonant cascade design, the OPO presents two {chi}{sup (2)}-level oscillation thresholds that are therefore much lower than for a {chi}{sup (3)} OPO. This is promising for reaching the regime of an effective third-order nonlinearity well above both thresholds. Such a {chi}{sup (2)} cascaded device also has potential applications in frequency conversion to far-infrared regimes. But, most importantly, it can generate novel multipartite quantum correlations in the output radiation, which represent a step beyond squeezed or entangled light. The output can be highly non-Gaussian and therefore not describable by any semiclassical model. In this paper, we derive quantum stochastic equations in the positive-P representation and undertake an analysis of steady-state and dynamical properties of this system.

  7. Cascades Volcano Observatory

    USGS Publications Warehouse

    Venezky, Dina Y.; Driedger, Carolyn; Pallister, John

    2008-01-01

    Washington's Mount St. Helens volcano reawakens explosively on October 1, 2004, after 18 years of quiescence. Scientists at the U.S. Geological Survey's Cascades Volcano Observatory (CVO) study and observe Mount St. Helens and other volcanoes of the Cascade Range in Washington, Oregon, and northern California that hold potential for future eruptions. CVO is one of five USGS Volcano Hazards Program observatories that monitor U.S. volcanoes for science and public safety. Learn more about Mount St. Helens and CVO at http://vulcan.wr.usgs.gov/.

  8. Triangular rogue wave cascades.

    PubMed

    Kedziora, David J; Ankiewicz, Adrian; Akhmediev, Nail

    2012-11-01

    By numerically applying the recursive Darboux transformation technique, we study high-order rational solutions of the nonlinear Schrödinger equation that appear spatiotemporally as triangular arrays of Peregrine solitons. These can be considered as rogue wave cascades and complement previously discovered circular cluster forms. In this analysis, we reveal a general parametric restriction for their existence and investigate the interplay between cascade and cluster forms. As a result, we demonstrate how to generate many more hybrid rogue wave solutions, including semicircular clusters that resemble claws.

  9. Cascaded thermoacoustic devices

    DOEpatents

    Swift, Gregory W.; Backhaus, Scott N.; Gardner, David L.

    2003-12-09

    A thermoacoustic device is formed with a resonator system defining at least one region of high specific acoustic impedance in an acoustic wave within the resonator system. A plurality of thermoacoustic units are cascaded together within the region of high specific acoustic impedance, where at least one of the thermoacoustic units is a regenerator unit.

  10. 'Cascade Gold' raspberry

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cascade Gold’ is a new gold fruited, floricane fruiting raspberry cultivar (Rubus idaeus L.) jointly released by Washington State University (WSU), Oregon State University (OSU) and the U.S. Department of Agriculture (USDA). It has been evaluated at Puyallup, Wash. in plantings from 1988 to 2008. ...

  11. Howling about Trophic Cascades

    ERIC Educational Resources Information Center

    Kowalewski, David

    2012-01-01

    Following evolutionary theory and an agriculture model, ecosystem research has stressed bottom-up dynamics, implying that top wild predators are epiphenomenal effects of more basic causes. As such, they are assumed expendable. A more modern co-evolutionary and wilderness approach--trophic cascades--instead suggests that top predators, whose…

  12. Quantum Cascade Lasers

    DTIC Science & Technology

    2007-11-02

    predicted small linewidth enhancement factor of QC lasers was measured in outside collaboration ( Prof . Shun-Lien Chuang at UIUC) and confirmed to be...Gmachl, Michael C. Wanke, Federico Capasso, Albert L. Hutchinson, Deborah L. Sivco, Sung- Nee G. Chu, and Alfred Y. Cho “Surface plasmon quantum cascade

  13. Integrated Broadband Quantum Cascade Laser

    NASA Technical Reports Server (NTRS)

    Mansour, Kamjou (Inventor); Soibel, Alexander (Inventor)

    2016-01-01

    A broadband, integrated quantum cascade laser is disclosed, comprising ridge waveguide quantum cascade lasers formed by applying standard semiconductor process techniques to a monolithic structure of alternating layers of claddings and active region layers. The resulting ridge waveguide quantum cascade lasers may be individually controlled by independent voltage potentials, resulting in control of the overall spectrum of the integrated quantum cascade laser source. Other embodiments are described and claimed.

  14. Linking Microbial Phylogeny to Metabolic Activity at the Single-Cell Level by Using Enhanced Element Labeling-Catalyzed Reporter Deposition Fluorescence In Situ Hybridization (EL-FISH) and NanoSIMS▿ †

    PubMed Central

    Behrens, Sebastian; Lösekann, Tina; Pett-Ridge, Jennifer; Weber, Peter K.; Ng, Wing-On; Stevenson, Bradley S.; Hutcheon, Ian D.; Relman, David A.; Spormann, Alfred M.

    2008-01-01

    To examine phylogenetic identity and metabolic activity of individual cells in complex microbial communities, we developed a method which combines rRNA-based in situ hybridization with stable isotope imaging based on nanometer-scale secondary-ion mass spectrometry (NanoSIMS). Fluorine or bromine atoms were introduced into cells via 16S rRNA-targeted probes, which enabled phylogenetic identification of individual cells by NanoSIMS imaging. To overcome the natural fluorine and bromine backgrounds, we modified the current catalyzed reporter deposition fluorescence in situ hybridization (FISH) technique by using halogen-containing fluorescently labeled tyramides as substrates for the enzymatic tyramide deposition. Thereby, we obtained an enhanced element labeling of microbial cells by FISH (EL-FISH). The relative cellular abundance of fluorine or bromine after EL-FISH exceeded natural background concentrations by up to 180-fold and allowed us to distinguish target from non-target cells in NanoSIMS fluorine or bromine images. The method was optimized on single cells of axenic Escherichia coli and Vibrio cholerae cultures. EL-FISH/NanoSIMS was then applied to study interrelationships in a dual-species consortium consisting of a filamentous cyanobacterium and a heterotrophic alphaproteobacterium. We also evaluated the method on complex microbial aggregates obtained from human oral biofilms. In both samples, we found evidence for metabolic interactions by visualizing the fate of substrates labeled with 13C-carbon and 15N-nitrogen, while individual cells were identified simultaneously by halogen labeling via EL-FISH. Our novel approach will facilitate further studies of the ecophysiology of known and uncultured microorganisms in complex environments and communities. PMID:18359832

  15. Information cascade on networks

    NASA Astrophysics Data System (ADS)

    Hisakado, Masato; Mori, Shintaro

    2016-05-01

    In this paper, we discuss a voting model by considering three different kinds of networks: a random graph, the Barabási-Albert (BA) model, and a fitness model. A voting model represents the way in which public perceptions are conveyed to voters. Our voting model is constructed by using two types of voters-herders and independents-and two candidates. Independents conduct voting based on their fundamental values; on the other hand, herders base their voting on the number of previous votes. Hence, herders vote for the majority candidates and obtain information relating to previous votes from their networks. We discuss the difference between the phases on which the networks depend. Two kinds of phase transitions, an information cascade transition and a super-normal transition, were identified. The first of these is a transition between a state in which most voters make the correct choices and a state in which most of them are wrong. The second is a transition of convergence speed. The information cascade transition prevails when herder effects are stronger than the super-normal transition. In the BA and fitness models, the critical point of the information cascade transition is the same as that of the random network model. However, the critical point of the super-normal transition disappears when these two models are used. In conclusion, the influence of networks is shown to only affect the convergence speed and not the information cascade transition. We are therefore able to conclude that the influence of hubs on voters' perceptions is limited.

  16. Cascade ICF power reactor

    SciTech Connect

    Hogan, W.J.; Pitts, J.H.

    1986-05-20

    The double-cone-shaped Cascade reaction chamber rotates at 50 rpm to keep a blanket of ceramic granules in place against the wall as they slide from the poles to the exit slots at the equator. The 1 m-thick blanket consists of layers of carbon, beryllium oxide, and lithium aluminate granules about 1 mm in diameter. The x rays and debris are stopped in the carbon granules; the neutrons are multiplied and moderated in the BeO and breed tritium in the LiAlO/sub 2/. The chamber wall is made up of SiO tiles held in compression by a network of composite SiC/Al tendons. Cascade operates at a 5 Hz pulse rate with 300 MJ in each pulse. The temperature in the blanket reaches 1600 K on the inner surface and 1350 K at the outer edge. The granules are automatically thrown into three separate vacuum heat exchangers where they give up their energy to high pressure helium. The helium is used in a Brayton cycle to obtain a thermal-to-electric conversion efficiency of 55%. Studies have been done on neutron activation, debris recovery, vaporization and recondensation of blanket material, tritium control and recovery, fire safety, and cost. These studies indicate that Cascade appears to be a promising ICF reactor candidate from all standpoints. At the 1000 MWe size, electricity could be made for about the same cost as in a future fission reactor.

  17. Mount Rainier active cascade volcano

    NASA Technical Reports Server (NTRS)

    1994-01-01

    Mount Rainier is one of about two dozen active or recently active volcanoes in the Cascade Range, an arc of volcanoes in the northwestern United States and Canada. The volcano is located about 35 kilometers southeast of the Seattle-Tacoma metropolitan area, which has a population of more than 2.5 million. This metropolitan area is the high technology industrial center of the Pacific Northwest and one of the commercial aircraft manufacturing centers of the United States. The rivers draining the volcano empty into Puget Sound, which has two major shipping ports, and into the Columbia River, a major shipping lane and home to approximately a million people in southwestern Washington and northwestern Oregon. Mount Rainier is an active volcano. It last erupted approximately 150 years ago, and numerous large floods and debris flows have been generated on its slopes during this century. More than 100,000 people live on the extensive mudflow deposits that have filled the rivers and valleys draining the volcano during the past 10,000 years. A major volcanic eruption or debris flow could kill thousands of residents and cripple the economy of the Pacific Northwest. Despite the potential for such danger, Mount Rainier has received little study. Most of the geologic work on Mount Rainier was done more than two decades ago. Fundamental topics such as the development, history, and stability of the volcano are poorly understood.

  18. Simultaneous monitoring of biofilm growth, microbial activity, and inorganic deposits on surfaces with an in situ, online, real-time, non-destructive, optical sensor.

    PubMed

    Strathmann, Martin; Mittenzwey, Klaus-Henrik; Sinn, Gert; Papadakis, Wassilios; Flemming, Hans-Curt

    2013-01-01

    Deposits on surfaces in water-bearing systems, also known as 'fouling', can lead to substantial losses in the performance of industrial processes as well as a decreased product quality. Early detection and localization of such deposits can, to a considerable extent, save such losses. However, most of the surfaces that become fouled, for example, in process water pipes, membrane systems, power plants, and food and beverage industries, are difficult to access and analyses conducted on the water phase do not reveal the site or extent of deposits. Furthermore, it is of interest to distinguish biological from non-biological deposits. Although they usually occur together, different countermeasures are necessary. Therefore, sensors are required that indicate the development of surface fouling in real-time, non-destructively, and in situ, preferably allowing for discrimination between chemical and/or biological deposits. In this paper, an optical deposit sensor is presented which fulfills these requirements. Based on multiple fluorescence excitation emission matrix analysis, it detects autofluorescence of amino acids as indicators of biomass. Autofluorescence of nicotinamide adenine dinucleotide + hydrogen is interpreted as an indicator of biological activity, thus it acts as a viability marker, making the method suited for assessing the efficacy of disinfection treatments. Scattering signals from abiotic deposits such as calcium carbonate or corrosion products can clearly be distinguished from biotic substances and monitored separately. The sensor provides an early warning of fouling, allowing for timely countermeasures to be deployed. It also provides an assessment of the success of cleaning treatments and is a promising tool for integrated antifouling strategies.

  19. The Ufm1 Cascade

    PubMed Central

    Daniel, Jens; Liebau, Eva

    2014-01-01

    The ubiquitin-fold modifier 1 (Ufm1) is a posttranslational modifier that belongs to the ubiquitin-like protein (UBL) family. Ufm1 is present in nearly all eukaryotic organisms, with the exception of fungi. It resembles ubiquitin in its ability to be ligated to other proteins, as well as in the mechanism of ligation. While the Ufm1 cascade has been implicated in endoplasmic reticulum functions and cell cycle control, its biological role still remains poorly understood. In this short review, we summarize the current state of Ufm1 research and its potential role in human diseases, like diabetes, ischemic heart disease and cancer. PMID:24921187

  20. COMPACT CASCADE IMPACTS

    DOEpatents

    Lippmann, M.

    1964-04-01

    A cascade particle impactor capable of collecting particles and distributing them according to size is described. In addition the device is capable of collecting on a pair of slides a series of different samples so that less time is required for the changing of slides. Other features of the device are its compactness and its ruggedness making it useful under field conditions. Essentially the unit consists of a main body with a series of transverse jets discharging on a pair of parallel, spaced glass plates. The plates are capable of being moved incremental in steps to obtain the multiple samples. (AEC)

  1. Crossover behavior in driven cascades.

    PubMed

    Burridge, James

    2013-09-01

    We propose a model which explains how power-law crossover behavior can arise in a system which is capable of experiencing cascading failure. In our model the susceptibility of the system to cascades is described by a single number, the propagation power, which measures the ease with which cascades propagate. Physically, such a number could represent the density of unstable material in a system, its internal connectivity, or the mean susceptibility of its component parts to failure. We assume that the propagation power follows an upward drifting Brownian motion between cascades, and drops discontinuously each time a cascade occurs. Cascades are described by a continuous state branching process with distributional properties determined by the value of the propagation power when they occur. In common with many cascading models, pure power-law behavior is exhibited at a critical level of propagation power, and the mean cascade size diverges. This divergence constrains large systems to the subcritical region. We show that as a result, crossover behavior appears in the cascade distribution when an average is performed over the distribution of propagation power. We are able to analytically determine the exponents before and after the crossover.

  2. Bacterial deposition in a parallel plate and a stagnation point flow chamber: microbial adhesion mechanisms depend on the mass transport conditions.

    PubMed

    Bakker, Dewi P; Busscher, Henk J; van der Mei, Henny C

    2002-02-01

    Deposition onto glass in a parallel plate (PP) and in a stagnation point (SP) flow chamber of Marinobacter hydrocarbonoclasticus, Psychrobacter sp. and Halomonas pacifica, suspended in artificial seawater, was compared in order to determine the influence of methodology on bacterial adhesion mechanisms. The three strains had different cell surface hydrophobicities, with water contact angles on bacterial lawns ranging from 18 to 85 degrees. Bacterial zeta potentials in artificial seawater were essentially zero. The three strains showed different adhesion kinetics and the hydrophilic bacterium H. pacifica had the greatest affinity for hydrophilic glass. On average, initial deposition rates were two- to threefold higher in the SP than in the PP flow chamber, possibly due to the convective fluid flow toward the substratum surface in the SP flow chamber causing more intimate contact between a substratum and a bacterial cell surface than the gentle collisions in the PP flow chamber. The ratios between the experimental deposition rates and theoretically calculated deposition rates based on mass transport equations not only differed among the strains, but were also different for the two flow chambers, indicating different mechanisms under the two modes of mass transport. The efficiencies of deposition were higher in the SP flow chamber than in the PP flow chamber: 62+/-4 and 114+/-28% respectively. Experiments in the SP flow chamber were more reproducible than those in the PP flow chamber, with standard deviations over triplicate runs of 8% in the SP and 23% in the PP flow chamber. This is probably due to better-controlled convective mass transport in the SP flow chamber, as compared with the diffusion-controlled mass transport in the PP flow chamber. In conclusion, this study shows that bacterial adhesion mechanisms depend on the prevailing mass transport conditions in the experimental set-up used, which makes it essential in the design of experiments that a methodology is

  3. Cascade Distillation System Development

    NASA Technical Reports Server (NTRS)

    Callahan, Michael R.; Sargushingh, Miriam; Shull, Sarah

    2014-01-01

    NASA's Advanced Exploration Systems (AES) Life Support System (LSS) Project is chartered with de-veloping advanced life support systems that will ena-ble NASA human exploration beyond low Earth orbit (LEO). The goal of AES is to increase the affordabil-ity of long-duration life support missions, and to re-duce the risk associated with integrating and infusing new enabling technologies required to ensure mission success. Because of the robust nature of distillation systems, the AES LSS Project is pursuing develop-ment of the Cascade Distillation Subsystem (CDS) as part of its technology portfolio. Currently, the system is being developed into a flight forward Generation 2.0 design.

  4. Unsteady turbulence cascades.

    PubMed

    Goto, Susumu; Vassilicos, J C

    2016-11-01

    We have run a total of 311 direct numerical simulations (DNSs) of decaying three-dimensional Navier-Stokes turbulence in a periodic box with values of the Taylor length-based Reynolds number up to about 300 and an energy spectrum with a wide wave-number range of close to -5/3 power-law dependence at the higher Reynolds numbers. On the basis of these runs, we have found a critical time when (i) the rate of change of the square of the integral length scale turns from increasing to decreasing, (ii) the ratio of interscale energy flux to high-pass filtered turbulence dissipation changes from decreasing to very slowly increasing in the inertial range, (iii) the signature of large-scale coherent structures disappears in the energy spectrum, and (iv) the scaling of the turbulence dissipation changes from the one recently discovered in DNSs of forced unsteady turbulence and in wind tunnel experiments of turbulent wakes and grid-generated turbulence to the classical scaling proposed by G. I. Taylor [Proc. R. Soc. London, Ser. A 151, 421 (1935)1364-502110.1098/rspa.1935.0158] and A. N. Kolmogorov [Dokl. Akad. Nauk SSSR 31, 538 (1941)]. Even though the customary theoretical basis for this Taylor-Kolmogorov scaling is a statistically stationary cascade where large-scale energy flux balances dissipation, this is not the case throughout the entire time range of integration in all our DNS runs. The recently discovered dissipation scaling can be reformulated physically as a situation in which the dissipation rates of the small and large scales evolve together. We advance two hypotheses that may form the basis of a theoretical approach to unsteady turbulence cascades in the presence of large-scale coherent structures.

  5. Unsteady turbulence cascades

    NASA Astrophysics Data System (ADS)

    Goto, Susumu; Vassilicos, J. C.

    2016-11-01

    We have run a total of 311 direct numerical simulations (DNSs) of decaying three-dimensional Navier-Stokes turbulence in a periodic box with values of the Taylor length-based Reynolds number up to about 300 and an energy spectrum with a wide wave-number range of close to -5 /3 power-law dependence at the higher Reynolds numbers. On the basis of these runs, we have found a critical time when (i) the rate of change of the square of the integral length scale turns from increasing to decreasing, (ii) the ratio of interscale energy flux to high-pass filtered turbulence dissipation changes from decreasing to very slowly increasing in the inertial range, (iii) the signature of large-scale coherent structures disappears in the energy spectrum, and (iv) the scaling of the turbulence dissipation changes from the one recently discovered in DNSs of forced unsteady turbulence and in wind tunnel experiments of turbulent wakes and grid-generated turbulence to the classical scaling proposed by G. I. Taylor [Proc. R. Soc. London, Ser. A 151, 421 (1935), 10.1098/rspa.1935.0158] and A. N. Kolmogorov [Dokl. Akad. Nauk SSSR 31, 538 (1941)]. Even though the customary theoretical basis for this Taylor-Kolmogorov scaling is a statistically stationary cascade where large-scale energy flux balances dissipation, this is not the case throughout the entire time range of integration in all our DNS runs. The recently discovered dissipation scaling can be reformulated physically as a situation in which the dissipation rates of the small and large scales evolve together. We advance two hypotheses that may form the basis of a theoretical approach to unsteady turbulence cascades in the presence of large-scale coherent structures.

  6. Error bounds in cascading regressions

    USGS Publications Warehouse

    Karlinger, M.R.; Troutman, B.M.

    1985-01-01

    Cascading regressions is a technique for predicting a value of a dependent variable when no paired measurements exist to perform a standard regression analysis. Biases in coefficients of a cascaded-regression line as well as error variance of points about the line are functions of the correlation coefficient between dependent and independent variables. Although this correlation cannot be computed because of the lack of paired data, bounds can be placed on errors through the required properties of the correlation coefficient. The potential meansquared error of a cascaded-regression prediction can be large, as illustrated through an example using geomorphologic data. ?? 1985 Plenum Publishing Corporation.

  7. Terahertz quantum cascade lasers

    NASA Astrophysics Data System (ADS)

    Koehler, Ruedeger; Tredicucci, Alessandro; Beltram, Fabio; Beere, Harvey E.; Linfield, Edmund H.; Davies, A. G.; Ritchie, David A.

    2003-07-01

    The terahertz region (1-10 THz) of the electromagnetic spectrum offers ample opportunities in spectroscopy, free space communications, remote sensing and medical imaging. Yet, the use of THz radiation in all these fields has been hampered by the lack of appropriate, convenient sources. We here report on unipolar semiconductor injection lasers that emit at THz frequencies (4.3 THz, λ ~ 69μm and 3.5 THz, λ ~ 85μm) and possess the potential for device-like implementation. They are based on the quantum cascade scheme employing interminiband transitions in the technologically mature AlGaAs/GaAs material system and feature a novel kind of waveguide loosely relying on the surface plasmon concpt. Continuous-wave laser emission is achieved with low thresholds of a few hundred A/cm2 up to 45 K heat sink temperature and maximum output powers of more than 4mW. Under pulsed excitation, peak output powers of 4.5mW at low temperatures and still 1 mW at 65 K are measured. The amximum operating temperature is 67 K.

  8. Trophic cascades across ecosystems.

    PubMed

    Knight, Tiffany M; McCoy, Michael W; Chase, Jonathan M; McCoy, Krista A; Holt, Robert D

    2005-10-06

    Predation can be intense, creating strong direct and indirect effects throughout food webs. In addition, ecologists increasingly recognize that fluxes of organisms across ecosystem boundaries can have major consequences for community dynamics. Species with complex life histories often shift habitats during their life cycles and provide potent conduits coupling ecosystems. Thus, local interactions that affect predator abundance in one ecosystem (for example a larval habitat) may have reverberating effects in another (for example an adult habitat). Here we show that fish indirectly facilitate terrestrial plant reproduction through cascading trophic interactions across ecosystem boundaries. Fish reduce larval dragonfly abundances in ponds, leading to fewer adult dragonflies nearby. Adult dragonflies consume insect pollinators and alter their foraging behaviour. As a result, plants near ponds with fish receive more pollinator visits and are less pollen limited than plants near fish-free ponds. Our results confirm that strong species interactions can reverberate across ecosystems, and emphasize the importance of landscape-level processes in driving local species interactions.

  9. Cascading Effects Following Intervention

    PubMed Central

    Patterson, Gerald R.; Forgatch, Marion S.; DeGarmo, David S.

    2010-01-01

    Four different sources for cascade effects were examined using 9-year process and outcome data from a randomized controlled trial (RCT) of a preventive intervention using Parent Management Training – Oregon Model (PMTO™). The social interaction learning (SIL) model of child antisocial behavior serves as one basis for predicting change. A second source addresses the issue of comorbid relationships among clinical diagnoses. The third source, collateral changes, describes events in which changes in one family member correlate with changes in another. The fourth component is based on the long-term effects of reducing coercion and increasing positive interpersonal processes within the family. New findings from the 9-year follow-up show that mothers experienced benefits as measured by standard of living (i.e., income, occupation, education, and financial stress) and frequency of police arrests. It is assumed that PMTO reduces the level of coercion, which sets the stage for a massive increase in positive social interaction. In effect, PMTO alters the family environment and thereby opens doors to healthy new social environments. PMID:20883592

  10. Cascade redox flow battery systems

    DOEpatents

    Horne, Craig R.; Kinoshita, Kim; Hickey, Darren B.; Sha, Jay E.; Bose, Deepak

    2014-07-22

    A reduction/oxidation ("redox") flow battery system includes a series of electrochemical cells arranged in a cascade, whereby liquid electrolyte reacts in a first electrochemical cell (or group of cells) before being directed into a second cell (or group of cells) where it reacts before being directed to subsequent cells. The cascade includes 2 to n stages, each stage having one or more electrochemical cells. During a charge reaction, electrolyte entering a first stage will have a lower state-of-charge than electrolyte entering the nth stage. In some embodiments, cell components and/or characteristics may be configured based on a state-of-charge of electrolytes expected at each cascade stage. Such engineered cascades provide redox flow battery systems with higher energy efficiency over a broader range of current density than prior art arrangements.

  11. Ultrarelativistic cascades and strangeness production

    SciTech Connect

    Kahana, D.E.; Kahana, S.H.

    1998-02-01

    A two phase cascade, LUCIFER II, developed for the treatment of ultra high energy Ion-Ion collisions is applied to the production of strangeness at SPS energies. This simulation is able to simultaneously describe both hard processes such as Drell-Yan and slower, soft processes such as the production of light mesons by separating the dynamics into two steps, a fast cascade involving only the nucleons in the original colliding relativistic ions followed, after an appropriate delay, by a normal multiscattering of the resulting excited baryons and mesons produced virtually in the first step. No energy loss can take place in the short time interval over which the first cascade takes place. The chief result is a reconciliation of the important Drell-Yan measurements with the apparent success of standard cascades to describe the nucleon stopping and meson production in heavy ion experiments at the CERN SPS.

  12. The cascade high productivity language

    NASA Technical Reports Server (NTRS)

    Callahan, David; Chamberlain, Branford L.; Zima, Hans P.

    2004-01-01

    This paper describes the design of Chapel, the Cascade High Productivity Language, which is being developed in the DARPA-funded HPCS project Cascade led by Cray Inc. Chapel pushes the state-of-the-art in languages for HEC system programming by focusing on productivity, in particular by combining the goal of highest possible object code performance with that of programmability offered by a high-level user interface.

  13. Stochastic background of atmospheric cascades

    SciTech Connect

    Wilk, G. ); Wlodarczyk, Z. )

    1993-06-15

    Fluctuations in the atmospheric cascades developing during the propagation of very high energy cosmic rays through the atmosphere are investigated using stochastic branching model of pure birth process with immigration. In particular, we show that the multiplicity distributions of secondaries emerging from gamma families are much narrower than those resulting from hadronic families. We argue that the strong intermittent like behaviour found recently in atmospheric families results from the fluctuations in the cascades themselves and are insensitive to the details of elementary interactions.

  14. Computation of inverse magnetic cascades

    NASA Technical Reports Server (NTRS)

    Montgomery, D.

    1981-01-01

    Inverse cascades of magnetic quantities for turbulent incompressible magnetohydrodynamics are reviewed, for two and three dimensions. The theory is extended to the Strauss equations, a description intermediate between two and three dimensions appropriate to Tokamak magnetofluids. Consideration of the absolute equilibrium Gibbs ensemble for the system leads to a prediction of an inverse cascade of magnetic helicity, which may manifest itself as a major disruption. An agenda for computational investigation of this conjecture is proposed.

  15. Aeroelasticity in Turbomachine-Cascades.

    DTIC Science & Technology

    1982-11-10

    STABLE -180 UNSTABLE -360 ’ - ’ - -180 0. 󈧖O DIAGRAM 3 AERODYNAMIC LIFT (OENT)COEFFICIENTI AND PHASE LEADS IN DEPENDANCE OF FLOM GUANTATIES AND CASCADE...ABL -0.8 0.0 -5 0. -5 DIAGRAM ’. AERODYNAMIC NORK AND DAMPING COEFFICIENTS (FOR A RIGID NOTION) IN DEPENDANCE OF FLOW OURNTATIES AND CASCADE GEOMETRY...coefficients on blades + blade vibration + vizualization in the transonic flow domain (Schlieren) + instability dependance on flow conditions, blade

  16. Cascading gravity is ghost free

    SciTech Connect

    Rham, Claudia de; Khoury, Justin; Tolley, Andrew J.

    2010-06-15

    We perform a full perturbative stability analysis of the 6D cascading gravity model in the presence of 3-brane tension. We demonstrate that for sufficiently large tension on the (flat) 3-brane, there are no ghosts at the perturbative level, consistent with results that had previously only been obtained in a specific 5D decoupling limit. These results establish the cascading gravity framework as a consistent infrared modification of gravity.

  17. High Efficiency Cascade Solar Cells

    SciTech Connect

    Shuguang Deng, Seamus Curran, Igor Vasiliev

    2010-09-28

    This report summarizes the main work performed by New Mexico State University and University of Houston on a DOE sponsored project High Efficiency Cascade Solar Cells. The main tasks of this project include materials synthesis, characterization, theoretical calculations, organic solar cell device fabrication and test. The objective of this project is to develop organic nano-electronic-based photovoltaics. Carbon nanotubes and organic conjugated polymers were used to synthesize nanocomposites as the new active semiconductor materials that were used for fabricating two device architectures: thin film coating and cascade solar cell fiber. Chemical vapor deposition technique was employed to synthesized a variety of carbon nanotubes (single-walled CNT, doubled-walled CNT, multi-walled CNT, N-doped SWCNT, DWCNT and MWCNT, and B-doped SWCNT, DWCNT and MWCNT) and a few novel carbon structures (CNT-based nanolance, nanocross and supported graphene film) that have potential applications in organic solar cells. Purification procedures were developed for removing amorphous carbons from carbon nanotubes, and a controlled oxidation method was established for partial truncation of fullerene molecules. Carbon nanotubes (DWCNT and DWCNT) were functionalized with fullerenes and dyes covalently and used to form nanocomposites with conjugated polymers. Biologically synthesized Tellurium nanotubes were used to form composite with the conjugated polymers as well, which generated the highest reported optical limiting values from composites. Several materials characterization technique including SEM/TEM, Raman, AFM, UV-vis, adsorption and EDS were employed to characterize the physical and chemical properties of the carbon nanotubes, the functionalized carbon nanotubes and the nanocomposites synthesized in this project. These techniques allowed us to have a spectroscopic and morphological control of the composite formation and to understand the materials assembled. A parallel 136-CPU

  18. Microbial reduction of uranium

    USGS Publications Warehouse

    Lovley, D.R.; Phillips, E.J.P.; Gorby, Y.A.; Landa, E.R.

    1991-01-01

    REDUCTION of the soluble, oxidized form of uranium, U(VI), to insoluble U(IV) is an important mechanism for the immobilization of uranium in aquatic sediments and for the formation of some uranium ores1-10. U(VI) reduction has generally been regarded as an abiological reaction in which sulphide, molecular hydrogen or organic compounds function as the reductant1,2,5,11. Microbial involvement in U(VI) reduction has been considered to be limited to indirect effects, such as microbial metabolism providing the reduced compounds for abiological U(VI) reduction and microbial cell walls providing a surface to stimulate abiological U(VI) reduction1,12,13. We report here, however, that dissimilatory Fe(III)-reducing microorganisms can obtain energy for growth by electron transport to U(VI). This novel form of microbial metabolism can be much faster than commonly cited abiological mechanisms for U(VI) reduction. Not only do these findings expand the known potential terminal electron acceptors for microbial energy transduction, they offer a likely explanation for the deposition of uranium in aquatic sediments and aquifers, and suggest a method for biological remediation of environments contaminated with uranium.

  19. Interband Cascade Photovoltaic Cells

    SciTech Connect

    Yang, Rui Q.; Santos, Michael B.; Johnson, Matthew B.

    2014-09-24

    In this project, we are performing basic and applied research to systematically investigate our newly proposed interband cascade (IC) photovoltaic (PV) cells [1]. These cells follow from the great success of infrared IC lasers [2-3] that pioneered the use of quantum-engineered IC structures. This quantum-engineered approach will enable PV cells to efficiently convert infrared radiation from the sun or other heat source, to electricity. Such cells will have important applications for more efficient use of solar energy, waste-heat recovery, and power beaming in combination with mid-infrared lasers. The objectives of our investigations are to: achieve extensive understanding of the fundamental aspects of the proposed PV structures, develop the necessary knowledge for making such IC PV cells, and demonstrate prototype working PV cells. This research will focus on IC PV structures and their segments for utilizing infrared radiation with wavelengths from 2 to 5 μm, a range well suited for emission by heat sources (1,000-2,000 K) that are widely available from combustion systems. The long-term goal of this project is to push PV technology to longer wavelengths, allowing for relatively low-temperature thermal sources. Our investigations address material quality, electrical and optical properties, and their interplay for the different regions of an IC PV structure. The tasks involve: design, modeling and optimization of IC PV structures, molecular beam epitaxial growth of PV structures and relevant segments, material characterization, prototype device fabrication and testing. At the end of this program, we expect to generate new cutting-edge knowledge in the design and understanding of quantum-engineered semiconductor structures, and demonstrate the concepts for IC PV devices with high conversion efficiencies.

  20. Flow characteristics of the Cascade granular blanket

    SciTech Connect

    Pitts, J.H.; Walton, O.R.

    1985-07-01

    Analysis of a single granule on a rotating cone shows that for the 35/sup 0/ half-angle, double-cone-shaped Cascade chamber, blanket granules will stay against the chamber wall if the rotational speed is 50 rpm or greater. The granules move axially down the wall with a slight (5-mm or less) sinusoidal oscillation in the circumferential direction. Granule chute-flow experiments confirm that two-layered flow can be obtained when the chute is inclined slightly above the granular material angle of repose. The top surface layer is thin and fast moving (supercritical flow). A thick bottom layer moves more slowly (subcritical flow controlled at the exit) with a velocity that increases with distance from the bottom of the chute. This is a desirable velocity profile because in the Cascade chamber about one-third of the fusion energy is deposited in the form of x rays and fusion-fuel-pellet debris in the top surface (inner-radius) layer.

  1. Flow characteristics of the Cascade granular blanket

    SciTech Connect

    Pitts, J.H.; Walton, O.R.

    1985-04-15

    Analysis of a single granule on a rotating cone shows that for the 35/sup 0/ half-angle, double-cone-shaped Cascade chamber, blanket granules will stay against the chamber wall if the rotational speed is 50 rpm or greater. The granules move axially down the wall with a slight (5-mm or less) sinusoidal oscillation in the circumferential direction. Granule chute-flow experiments confirm that two-layered flow can be obtained when the chute is inclined slightly above the granular material angle of repose. The top surface layer is thin and fast moving (supercritical flow). A thick bottom layer moves more slowly (subcritical flow controlled at the exit) with a velocity that increases with distance from the bottom of the chute. This is a desirable velocity profile because in the Cascade chamber about one-third of the fusion energy is deposited in the form of x rays and fusion-fuel-pellet debris in the top surface (inner-radius) layer.

  2. Cascaded-cladding-pumped cascaded Raman fiber amplifier.

    PubMed

    Jiang, Huawei; Zhang, Lei; Feng, Yan

    2015-06-01

    The conversion efficiency of double-clad Raman fiber laser is limited by the cladding-to-core area ratio. To get high conversion efficiency, the inner-cladding-to-core area ratio has to be less than about 8, which limits the brightness enhancement. To overcome the problem, a cascaded-cladding-pumped cascaded Raman fiber laser with multiple-clad fiber as the Raman gain medium is proposed. A theoretical model of Raman fiber amplifier with multiple-clad fiber is developed, and numerical simulation proves that the proposed scheme can improve the conversion efficiency and brightness enhancement of cladding pumped Raman fiber laser.

  3. Cascade Reservoirs Floodwater Resources Utilization

    NASA Astrophysics Data System (ADS)

    Wang, Y.

    2015-12-01

    A reasonable floodwater resources utilization method is put forward by dynamic controlling of cascade reservoirs flood control limited level in this paper. According to the probability distribution of the beginning time of the first flood and the ending time of the final flood from July to September, the Fuzzy Statistic Analysis was used to divide the main flood season. By fitting the flood season membership functions of each period, the cascade reservoirs flood control limited water level for each period were computed according to the characteristic data of reservoirs. In terms of the benefit maximization and risk minimum principle, the reasonable combination of flood control limited water level of cascade reservoirs was put forward.

  4. Autoregressive cascades on random networks

    NASA Astrophysics Data System (ADS)

    Iyer, Srikanth K.; Vaze, Rahul; Narasimha, Dheeraj

    2016-04-01

    A network cascade model that captures many real-life correlated node failures in large networks via load redistribution is studied. The considered model is well suited for networks where physical quantities are transmitted, e.g., studying large scale outages in electrical power grids, gridlocks in road networks, and connectivity breakdown in communication networks, etc. For this model, a phase transition is established, i.e., existence of critical thresholds above or below which a small number of node failures lead to a global cascade of network failures or not. Theoretical bounds are obtained for the phase transition on the critical capacity parameter that determines the threshold above and below which cascade appears or disappears, respectively, that are shown to closely follow numerical simulation results.

  5. Nanowire terahertz quantum cascade lasers

    SciTech Connect

    Grange, Thomas

    2014-10-06

    Quantum cascade lasers made of nanowire axial heterostructures are proposed. The dissipative quantum dynamics of their carriers is theoretically investigated using non-equilibrium Green functions. Their transport and gain properties are calculated for varying nanowire thickness, from the classical-wire regime to the quantum-wire regime. Our calculation shows that the lateral quantum confinement provided by the nanowires allows an increase of the maximum operation temperature and a strong reduction of the current density threshold compared to conventional terahertz quantum cascade lasers.

  6. Cascading dynamics in modular networks

    NASA Astrophysics Data System (ADS)

    Galstyan, Aram; Cohen, Paul

    2007-03-01

    In this paper we study a simple cascading process in a structured heterogeneous population, namely, a network composed of two loosely coupled communities. We demonstrate that under certain conditions the cascading dynamics in such a network has a two-tiered structure that characterizes activity spreading at different rates in the communities. We study the dynamics of the model using both simulations and an analytical approach based on annealed approximation and obtain good agreement between the two. Our results suggest that network modularity might have implications in various applications, such as epidemiology and viral marketing.

  7. Unsteady transonic flow in cascades

    NASA Technical Reports Server (NTRS)

    Surampudi, S. P.; Adamczyk, J. J.

    1984-01-01

    There is a need for methods to predict the unsteady air loads associated with flutter of turbomachinery blading at transonic speeds. The results of such an analysis in which the steady relative flow approaching a cascade of thin airfoils is assumed to be transonic, irrotational, and isentropic is presented. The blades in the cascade are allowed to undergo a small amplitude harmonic oscillation which generates a small unsteady flow superimposed on the existing steady flow. The blades are assumed to oscillate with a prescribed motion of constant amplitude and interblade phase angle. The equations of motion are obtained by linearizing about a uniform flow the inviscid nonheat conducting continuity and momentum equations. The resulting equations are solved by employing the Weiner Hopf technique. The solution yields the unsteady aerodynamic forces acting on the cascade at Mach number equal to 1. Making use of an unsteady transonic similarity law, these results are compared with the results obtained from linear unsteady subsonic and supersonic cascade theories. A parametric study is conducted to find the effects of reduced frequency, solidity, stagger angle, and position of pitching axis on the flutter.

  8. Engineering Light: Quantum Cascade Lasers

    ScienceCinema

    Claire Gmachl

    2016-07-12

    Quantum cascade lasers are ideal for environmental sensing and medical diagnostic applications. Gmachl discusses how these lasers work, and their applications, including their use as chemical trace gas sensors. As examples of these applications, she briefly presents results from her field campaign at the Beijing Olympics, and ongoing campaigns in Texas, Maryland, and Ghana.

  9. Applications of cascade multilevel inverters.

    PubMed

    Peng, Fang-zen; Qian, Zhao-ming

    2003-01-01

    Cascade multilevel inverters have been developed for electric utility applications. A cascade M-level inverter consists of (M-1)/2 H-bridges in which each bridge's dc voltage is supported by its own dc capacitor. The new inverter can: (1) generate almost sinusoidal waveform voltage while only switching one time per fundamental cycle; (2) dispense with multi-pulse inverters' transformers used in conventional utility interfaces and static var compensators; (3) enables direct parallel or series transformer-less connection to medium- and high-voltage power systems. In short, the cascade inverter is much more efficient and suitable for utility applications than traditional multi-pulse and pulse width modulation (PWM) inverters. The authors have experimentally demonstrated the superiority of the new inverter for power supply, (hybrid) electric vehicle (EV) motor drive, reactive power (var) and harmonic compensation. This paper summarizes the features, feasibility, and control schemes of the cascade inverter for utility applications including utility interface of renewable energy, voltage regulation, var compensation, and harmonic filtering in power systems. Analytical, simulated, and experimental results demonstrated the superiority of the new inverters.

  10. CASCADE: Introducing AI into CBT.

    ERIC Educational Resources Information Center

    Hendley, R. J.; Jurascheck, N.

    1992-01-01

    Discusses changes in training requirements of commerce and industry in the United Kingdom and describes a project, CASCADE, that was developed to investigate and implement the introduction of artificial intelligence (AI) techniques into computer-based training (CBT). An overview of pilot projects in higher education settings is provided. (eight…

  11. Activation Cascading in Sign Production

    ERIC Educational Resources Information Center

    Navarrete, Eduardo; Peressotti, Francesca; Lerose, Luigi; Miozzo, Michele

    2017-01-01

    In this study, we investigated how activation unfolds in sign production by examining whether signs that are not produced have their representations activated by semantics (cascading of activation). Deaf signers were tested with a picture-picture interference task. Participants were presented with pairs of overlapping pictures and named the green…

  12. The Microbial Opsin Family of Optogenetic Tools

    SciTech Connect

    Zhang, Feng; Vierock, Johannes; Yizhar, Ofer; Fenno, Lief E.; Tsunoda, Satoshi; Kianianmomeni, Arash; Prigge, Matthias; Berndt, Andre; Cushman, John C.; Polle, Juergen E.; Magnuson, Jon K.; Hegemann, Peter; Deisseroth, Karl

    2011-12-23

    The capture and utilization of light is an exquisitely evolved process. The single-component microbial opsins, although more limited than multicomponent cascades in processing, display unparalleled compactness and speed. Recent advances in understanding microbial opsins have been driven by molecular engineering for optogenetics and by comparative genomics. Here we provide a Primer on these light-activated ion channels and pumps, describe a group of opsins bridging prior categories, and explore the convergence of molecular engineering and genomic discovery for the utilization and understanding of these remarkable molecular machines.

  13. Dynamics robustness of cascading systems.

    PubMed

    Young, Jonathan T; Hatakeyama, Tetsuhiro S; Kaneko, Kunihiko

    2017-03-01

    A most important property of biochemical systems is robustness. Static robustness, e.g., homeostasis, is the insensitivity of a state against perturbations, whereas dynamics robustness, e.g., homeorhesis, is the insensitivity of a dynamic process. In contrast to the extensively studied static robustness, dynamics robustness, i.e., how a system creates an invariant temporal profile against perturbations, is little explored despite transient dynamics being crucial for cellular fates and are reported to be robust experimentally. For example, the duration of a stimulus elicits different phenotypic responses, and signaling networks process and encode temporal information. Hence, robustness in time courses will be necessary for functional biochemical networks. Based on dynamical systems theory, we uncovered a general mechanism to achieve dynamics robustness. Using a three-stage linear signaling cascade as an example, we found that the temporal profiles and response duration post-stimulus is robust to perturbations against certain parameters. Then analyzing the linearized model, we elucidated the criteria of when signaling cascades will display dynamics robustness. We found that changes in the upstream modules are masked in the cascade, and that the response duration is mainly controlled by the rate-limiting module and organization of the cascade's kinetics. Specifically, we found two necessary conditions for dynamics robustness in signaling cascades: 1) Constraint on the rate-limiting process: The phosphatase activity in the perturbed module is not the slowest. 2) Constraints on the initial conditions: The kinase activity needs to be fast enough such that each module is saturated even with fast phosphatase activity and upstream changes are attenuated. We discussed the relevance of such robustness to several biological examples and the validity of the above conditions therein. Given the applicability of dynamics robustness to a variety of systems, it will provide a

  14. Cascaded Bragg scattering in fiber optics.

    PubMed

    Xu, Y Q; Erkintalo, M; Genty, G; Murdoch, S G

    2013-01-15

    We report on a theoretical and experimental study of cascaded Bragg scattering in fiber optics. We show that the usual energy-momentum conservation of Bragg scattering can be considerably relaxed via cascade-induced phase-matching. Experimentally we demonstrate frequency translation over six- and 11-fold cascades, in excellent agreement with derived phase-matching conditions.

  15. Eruptive history of South Sister, Oregon Cascades

    USGS Publications Warehouse

    Fierstein, J.; Hildreth, W.; Calvert, A.T.

    2011-01-01

    South Sister is southernmost and highest of the Three Sisters, three geologically dissimilar stratovolcanoes that together form a spectacular 20km reach along the Cascade crest in Oregon. North Sister is a monotonously mafic edifice as old as middle Pleistocene, Middle Sister a basalt-andesite-dacite cone built between 48 and 14ka, and South Sister is a basalt-free edifice that alternated rhyolitic and intermediate modes from 50ka to 2ka (largely contemporaneous with Middle Sister). Detailed mapping, 330 chemical analyses, and 42 radioisotopic ages show that the oldest exposed South Sister lavas were initially rhyolitic ~50ka. By ~37ka, rhyolitic lava flows and domes (72-74% SiO2) began alternating with radially emplaced dacite (63-68% SiO2) and andesite (59-63% SiO2) lava flows. Construction of a broad cone of silicic andesite-dacite (61-64% SiO2) culminated ~30ka in a dominantly explosive sequence that began with crater-forming andesitic eruptions that left fragmental deposits at least 200m thick. This was followed at ~27ka by growth of a steeply dipping summit cone of agglutinate-dominated andesite (56-60.5% SiO2) and formation of a summit crater ~800m wide. This crater was soon filled and overtopped by a thick dacite lava flow and then by >150m of dacitic pyroclastic ejecta. Small-volume dacite lavas (63-67% SiO2) locally cap the pyroclastic pile. A final sheet of mafic agglutinate (54-56% SiO2) - the most mafic product of South Sister - erupted from and drapes the small (300-m-wide) present-day summit crater, ending a summit-building sequence that lasted until ~22ka. A 20kyr-long-hiatus was broken by rhyolite eruptions that produced (1) the Rock Mesa coulee, tephra, and satellite domelets (73.5% SiO2) and (2) the Devils Chain of ~20 domes and short coulees (72.3-72.8% SiO2) from N-S vent alignments on South Sister's flanks. The compositional reversal from mafic summit agglutinate to recent rhyolites epitomizes the frequently changing compositional modes of the

  16. [Problems related to the deposition of microorganisms in the patent procedure].

    PubMed

    Bondarenko, N G; Korovkin

    1983-07-01

    Some practical aspects concerning deposition of microbial strains in connection with patenting are discussed. In particular, situations requiring deposition of individual strains, mixed cultures or associants are analysed. Problems of patent legislation pertinent to deposition of microorganisms are discussed.

  17. Alzheimer's Disease and the Amyloid Cascade Hypothesis: A Critical Review

    PubMed Central

    Reitz, Christiane

    2012-01-01

    Since 1992, the amyloid cascade hypothesis has played the prominent role in explaining the etiology and pathogenesis of Alzheimer's disease (AD). It proposes that the deposition of β-amyloid (Aβ) is the initial pathological event in AD leading to the formation of senile plaques (SPs) and then to neurofibrillary tangles (NFTs), neuronal cell death, and ultimately dementia. While there is substantial evidence supporting the hypothesis, there are also limitations: (1) SP and NFT may develop independently, and (2) SPs and NFTs may be the products rather than the causes of neurodegeneration in AD. In addition, randomized clinical trials that tested drugs or antibodies targeting components of the amyloid pathway have been inconclusive. This paper provides a critical overview of the evidence for and against the amyloid cascade hypothesis in AD and provides suggestions for future directions. PMID:22506132

  18. Cascade aeroacoustics including steady loading effects

    NASA Astrophysics Data System (ADS)

    Chiang, Hsiao-Wei D.; Fleeter, Sanford

    A mathematical model is developed to analyze the effects of airfoil and cascade geometry, steady aerodynamic loading, and the characteristics of the unsteady flow field on the discrete frequency noise generation of a blade row in an incompressible flow. The unsteady lift which generates the noise is predicted with a complex first-order cascade convected gust analysis. This model was then applied to the Gostelow airfoil cascade and variations, demonstrating that steady loading, cascade solidity, and the gust direction are significant. Also, even at zero incidence, the classical flat plate cascade predictions are unacceptable.

  19. Microbial mercury methylation in Antarctic sea ice.

    PubMed

    Gionfriddo, Caitlin M; Tate, Michael T; Wick, Ryan R; Schultz, Mark B; Zemla, Adam; Thelen, Michael P; Schofield, Robyn; Krabbenhoft, David P; Holt, Kathryn E; Moreau, John W

    2016-08-01

    Atmospheric deposition of mercury onto sea ice and circumpolar sea water provides mercury for microbial methylation, and contributes to the bioaccumulation of the potent neurotoxin methylmercury in the marine food web. Little is known about the abiotic and biotic controls on microbial mercury methylation in polar marine systems. However, mercury methylation is known to occur alongside photochemical and microbial mercury reduction and subsequent volatilization. Here, we combine mercury speciation measurements of total and methylated mercury with metagenomic analysis of whole-community microbial DNA from Antarctic snow, brine, sea ice and sea water to elucidate potential microbially mediated mercury methylation and volatilization pathways in polar marine environments. Our results identify the marine microaerophilic bacterium Nitrospina as a potential mercury methylator within sea ice. Anaerobic bacteria known to methylate mercury were notably absent from sea-ice metagenomes. We propose that Antarctic sea ice can harbour a microbial source of methylmercury in the Southern Ocean.

  20. Spontaneous mirror-symmetry breaking induces inverse energy cascade in 3D active fluids

    PubMed Central

    Słomka, Jonasz; Dunkel, Jörn

    2017-01-01

    Classical turbulence theory assumes that energy transport in a 3D turbulent flow proceeds through a Richardson cascade whereby larger vortices successively decay into smaller ones. By contrast, an additional inverse cascade characterized by vortex growth exists in 2D fluids and gases, with profound implications for meteorological flows and fluid mixing. The possibility of a helicity-driven inverse cascade in 3D fluids had been rejected in the 1970s based on equilibrium-thermodynamic arguments. Recently, however, it was proposed that certain symmetry-breaking processes could potentially trigger a 3D inverse cascade, but no physical system exhibiting this phenomenon has been identified to date. Here, we present analytical and numerical evidence for the existence of an inverse energy cascade in an experimentally validated 3D active fluid model, describing microbial suspension flows that spontaneously break mirror symmetry. We show analytically that self-organized scale selection, a generic feature of many biological and engineered nonequilibrium fluids, can generate parity-violating Beltrami flows. Our simulations further demonstrate how active scale selection controls mirror-symmetry breaking and the emergence of a 3D inverse cascade. PMID:28193853

  1. Cascade Chaotic System With Applications.

    PubMed

    Zhou, Yicong; Hua, Zhongyun; Pun, Chi-Man; Chen, C L Philip

    2015-09-01

    Chaotic maps are widely used in different applications. Motivated by the cascade structure in electronic circuits, this paper introduces a general chaotic framework called the cascade chaotic system (CCS). Using two 1-D chaotic maps as seed maps, CCS is able to generate a huge number of new chaotic maps. Examples and evaluations show the CCS's robustness. Compared with corresponding seed maps, newly generated chaotic maps are more unpredictable and have better chaotic performance, more parameters, and complex chaotic properties. To investigate applications of CCS, we introduce a pseudo-random number generator (PRNG) and a data encryption system using a chaotic map generated by CCS. Simulation and analysis demonstrate that the proposed PRNG has high quality of randomness and that the data encryption system is able to protect different types of data with a high-security level.

  2. Bankruptcy Cascades in Interbank Markets

    PubMed Central

    Tedeschi, Gabriele; Mazloumian, Amin; Gallegati, Mauro; Helbing, Dirk

    2012-01-01

    We study a credit network and, in particular, an interbank system with an agent-based model. To understand the relationship between business cycles and cascades of bankruptcies, we model a three-sector economy with goods, credit and interbank market. In the interbank market, the participating banks share the risk of bad debits, which may potentially spread a bank’s liquidity problems through the network of banks. Our agent-based model sheds light on the correlation between bankruptcy cascades and the endogenous economic cycle of booms and recessions. It also demonstrates the serious trade-off between, on the one hand, reducing risks of individual banks by sharing them and, on the other hand, creating systemic risks through credit-related interlinkages of banks. As a result of our study, the dynamics underlying the meltdown of financial markets in 2008 becomes much better understandable. PMID:23300760

  3. Cascade Mountain Range in Oregon

    USGS Publications Warehouse

    Sherrod, David R.

    2016-01-01

    Along its Oregon segment, the Cascade Range is almost entirely volcanic in origin. The volcanoes and their eroded remnants are the visible magmatic expression of the Cascadia subduction zone, where the offshore Juan de Fuca tectonic plate is subducted beneath North America. Subduction occurs as two lithospheric plates collide, and an underthrusted oceanic plate is commonly dragged into the mantle by the pull of gravity, carrying ocean-bottom rock and sediment down to where heat and pressure expel water. As this water rises, it lowers the melting temperature in the overlying hot mantle rocks, thereby promoting melting. The molten rock supplies the volcanic arcs with heat and magma. Cascade Range volcanoes are part of the Ring of Fire, a popular term for the numerous volcanic arcs that encircle the Pacific Ocean.

  4. Bankruptcy cascades in interbank markets.

    PubMed

    Tedeschi, Gabriele; Mazloumian, Amin; Gallegati, Mauro; Helbing, Dirk

    2012-01-01

    We study a credit network and, in particular, an interbank system with an agent-based model. To understand the relationship between business cycles and cascades of bankruptcies, we model a three-sector economy with goods, credit and interbank market. In the interbank market, the participating banks share the risk of bad debits, which may potentially spread a bank's liquidity problems through the network of banks. Our agent-based model sheds light on the correlation between bankruptcy cascades and the endogenous economic cycle of booms and recessions. It also demonstrates the serious trade-off between, on the one hand, reducing risks of individual banks by sharing them and, on the other hand, creating systemic risks through credit-related interlinkages of banks. As a result of our study, the dynamics underlying the meltdown of financial markets in 2008 becomes much better understandable.

  5. Lens Coupled Quantum Cascade Laser

    NASA Technical Reports Server (NTRS)

    Hu, Qing (Inventor); Lee, Alan Wei Min (Inventor)

    2013-01-01

    Terahertz quantum cascade (QC) devices are disclosed that can operate, e.g., in a range of about 1 THz to about 10 THz. In some embodiments, QC lasers are disclosed in which an optical element (e.g., a lens) is coupled to an output facet of the laser's active region to enhance coupling of the lasing radiation from the active region to an external environment. In other embodiments, terahertz amplifier and tunable terahertz QC lasers are disclosed.

  6. Dynamics robustness of cascading systems

    PubMed Central

    Kaneko, Kunihiko

    2017-01-01

    A most important property of biochemical systems is robustness. Static robustness, e.g., homeostasis, is the insensitivity of a state against perturbations, whereas dynamics robustness, e.g., homeorhesis, is the insensitivity of a dynamic process. In contrast to the extensively studied static robustness, dynamics robustness, i.e., how a system creates an invariant temporal profile against perturbations, is little explored despite transient dynamics being crucial for cellular fates and are reported to be robust experimentally. For example, the duration of a stimulus elicits different phenotypic responses, and signaling networks process and encode temporal information. Hence, robustness in time courses will be necessary for functional biochemical networks. Based on dynamical systems theory, we uncovered a general mechanism to achieve dynamics robustness. Using a three-stage linear signaling cascade as an example, we found that the temporal profiles and response duration post-stimulus is robust to perturbations against certain parameters. Then analyzing the linearized model, we elucidated the criteria of when signaling cascades will display dynamics robustness. We found that changes in the upstream modules are masked in the cascade, and that the response duration is mainly controlled by the rate-limiting module and organization of the cascade’s kinetics. Specifically, we found two necessary conditions for dynamics robustness in signaling cascades: 1) Constraint on the rate-limiting process: The phosphatase activity in the perturbed module is not the slowest. 2) Constraints on the initial conditions: The kinase activity needs to be fast enough such that each module is saturated even with fast phosphatase activity and upstream changes are attenuated. We discussed the relevance of such robustness to several biological examples and the validity of the above conditions therein. Given the applicability of dynamics robustness to a variety of systems, it will provide a

  7. Turbulence: Does Energy Cascade Exist?

    NASA Astrophysics Data System (ADS)

    Josserand, Christophe; Le Berre, Martine; Lehner, Thierry; Pomeau, Yves

    2016-11-01

    To answer the question whether a cascade of energy exists or not in turbulence, we propose a set of correlation functions able to test if there is an irreversible transfert of energy, step by step, from large to small structures. These tests are applied to real Eulerian data of a turbulent velocity flow, taken in the wind grid tunnel of Modane, and also to a prototype model equation for wave turbulence. First we demonstrate the irreversible character of the flow by using multi-time correlation function at a given point of space. Moreover the unexpected behavior of the test function leads us to connect irreversibility and finite time singularities (intermittency). Secondly we show that turbulent cascade exists, and is a dynamical process, by using a test function depending on time and frequency. The cascade shows up only in the inertial domain where the kinetic energy is transferred more rapidly (on average) from the wavenumber k1 to k2 than from k1 to k'2 larger than k2.

  8. Demixing cascades in cluster crystals.

    PubMed

    Wilding, Nigel B; Sollich, Peter

    2014-09-07

    In a cluster crystal, each lattice site is occupied by multiple soft-core particles. As the number density is increased at zero temperature, a "cascade" of isostructural phase transitions can occur between states whose site occupancy differs by unity. For low but finite temperature, each of these transitions terminates in a critical point. Using tailored Monte Carlo simulation techniques, we have studied such demixing cascades in systems of soft particles interacting via potentials of the generalized exponential form u(r) = ε exp [-(r/σ)(n)]. We have estimated the critical parameters of the first few transitions in the cascade as a function of the softness parameter n. The critical temperature and pressure exhibit non-monotonic behavior as n is varied, although the critical chemical potential remains monotonic. The trends for the pressure and chemical potential are confirmed by cell model calculations at zero temperature. As n → 2(+), all the transitions that we have observed are preempted by melting although we cannot rule out that clustering transitions survive at high density.

  9. Enantioselective organo-cascade catalysis.

    PubMed

    Huang, Yong; Walji, Abbas M; Larsen, Catharine H; MacMillan, David W C

    2005-11-02

    A new strategy for organocatalysis based on the biochemical blueprints of biosynthesis has enabled a new laboratory approach to cascade catalysis. Imidazolidinone-based catalytic cycles, involving iminium and enamine activation, have been successfully combined to allow a large diversity of nucleophiles (furans, thiophenes, indoles, butenolides, hydride sources, tertiary amino lactone equivalents) and electrophiles (fluorinating and chlorinating reagents) to undergo sequential addition with a wide array of alpha,beta-unsaturated aldehydes. These new cascade catalysis protocols allow the invention of enantioselective transformations that were previously unknown, including the asymmetric catalytic addition of the elements of HF across a trisubstituted olefin. Importantly, these domino catalysis protocols can be mediated by a single imidazolidinone catalyst or using cycle-specific amine catalysts. In the latter case, cascade catalysis pathways can be readily modulated to provide a required diastereo- and enantioselective outcome via the judicious selection of the enantiomeric series of the amine catalysts. A central benefit of combining multiple asymmetric organocatalytic events into one sequence is the intrinsic requirement for enantioenrichment in the second induction cycle, as demonstrated by the enantioselectivities obtained throughout this study (>/=99% ee in all cases).

  10. Microbial naphthenic Acid degradation.

    PubMed

    Whitby, Corinne

    2010-01-01

    Naphthenic acids (NAs) are an important group of trace organic pollutants predominantly comprising saturated aliphatic and alicyclic carboxylic acids. NAs are ubiquitous; occurring naturally in hydrocarbon deposits (petroleum, oil sands, bitumen, and crude oils) and also have widespread industrial uses. Consequently, NAs can enter the environment from both natural and anthropogenic processes. NAs are highly toxic, recalcitrant compounds that persist in the environment for many years, and it is important to develop efficient bioremediation strategies to decrease both their abundance and toxicity in the environment. However, the diversity of microbial communities involved in NA-degradation, and the mechanisms by which NAs are biodegraded, are poorly understood. This lack of knowledge is mainly due to the difficulties in identifying and purifying individual carboxylic acid compounds from complex NA mixtures found in the environment, for microbial biodegradation studies. This paper will present an overview of NAs, their origin and fate in the environment, and their toxicity to the biota. The review describes the microbial degradation of both naturally occurring and chemically synthesized NAs. Proposed pathways for aerobic NA biodegradation, factors affecting NA biodegradation rates, and possible bioremediation strategies are also discussed.

  11. High-performance recombinant protein production with Escherichia coli in continuously operated cascades of stirred-tank reactors.

    PubMed

    Schmideder, Andreas; Weuster-Botz, Dirk

    2017-03-01

    The microbial expression of intracellular, recombinant proteins in continuous bioprocesses suffers from low product concentrations. Hence, a process for the intracellular production of photoactivatable mCherry with Escherichia coli in a continuously operated cascade of two stirred-tank reactors was established to separate biomass formation (first reactor) and protein expression (second reactor) spatially. Cascades of miniaturized stirred-tank reactors were implemented, which enable the 24-fold parallel characterization of cascade processes and the direct scale-up of results to the liter scale. With PAmCherry concentrations of 1.15 g L(-1) cascades of stirred-tank reactors improved the process performance significantly compared to production processes in chemostats. In addition, an optimized fed-batch process was outperformed regarding space-time yield (149 mg L(-1) h(-1)). This study implicates continuous cascade processes to be a promising alternative to fed-batch processes for microbial protein production and demonstrates that miniaturized stirred-tank reactors can reduce the timeline and costs for cascade process characterization.

  12. Ecology, Microbial

    SciTech Connect

    Konopka, Allan

    2009-03-19

    Microbial ecology is a relatively young discipline within the field of microbiology. Its modern history spans just the past 60 years, and the field is defined by its emphasis on understanding the interactions of microbes with their environment, rather than their behavior under artificial laboratory conditions. Because microbes are ubiquitous, microbial ecologists study a broad diversity of habitats that range from aquatic to terrestrial to plant- or animal-associated. This has made it a challenge to identify unifying principles within the field. One approach is to recognize that although the activity of microbes in nature have effects at the macroscale, they interact with their physical, chemical and biological milieu at a scale of micrometers. At this scale, several different microbial ecosystems can be defined, based upon association with particles, the presence of environmental gradients and the continuous availability of water. Principles applicable to microbial ecology reflect not only their population ecology and physiological ecology, but also their broad versatility and quantitative importance in the biosphere as biogeochemical catalysts and capacity for rapid physiological and evolutionary responses.

  13. Ecology, Microbial

    SciTech Connect

    Konopka, Allan

    2009-05-15

    Microbial ecology is a relatively young discipline within the field of microbiology. Its modern history spans just the past 60 years, and the field is defined by its emphasis on understanding the interactions of microbes with their environment, rather than their behavior under artificial laboratory conditions. Because microbes are ubiquitous, microbial ecologists study a broad diversity of habitats that range from aquatic to terrestrial to plant- or animal-associated. This has made it a challenge to identify unifying principles within the field. One approach is to recognize that although the activity of microbes in nature have effects at the macroscale, they interact with their physical, chemical and biological milieu at a scale of micrometers. At this scale, several different microbial ecosystems can be defined, based upon association with particles, the presence of environmental gradients and the continuous availability of water. Principles applicable to microbial ecology reflect not only their population ecology and physiological ecology, but also their broad versatility and quantitative importance in the biosphere as biogeochemical catalysts and capacity for rapid physiological and evolutionary responses.

  14. Shotgun metagenomic analysis of metabolic diversity and microbial community structure in experimental vernal pools subjected to nitrate pulse

    PubMed Central

    2013-01-01

    Background Human activities have greatly increased nitrogen (N) levels in natural habitats through atmospheric N deposition and nutrient leaching, which can have large effects on N cycling and other ecosystem processes. Because of the significant role microorganisms play in N cycling, high inputs of nitrogenous compounds, such as nitrate (NO3-), into natural ecosystems could have cascading effects on microbial community structure and the metabolic processes that microbes perform. To investigate the multiple effects of NO3- pollution on microbial communities, we created two shotgun metagenomes from vernal pool microcosms that were either enriched with a solution of 10 mg NO3--N (+NO3-) or received distilled water as a control (−N). Results After only 20 hours of exposure to NO3-, the initial microbial community had shifted toward one containing a higher proportional abundance of stress tolerance and fermentation environmental gene tags (EGTs). Surprisingly, we found no changes to N metabolism EGTs, even though large shifts in denitrification rates were seen between the +NO3- and –N microcosms. Thus, in the absence of NO3- addition, it is plausible that the microbes used other respiratory pathways for energy. Respiratory pathways involving iron may have been particularly important in our –N microcosms, since iron acquisition EGTs were proportionally higher in the –N metagenome. Additionally, we noted a proportional increase in Acidobacteria and Alphaproteobacteria EGTs in response to NO3- addition. These community shifts in were not evident with TRFLP, suggesting that metagenomic analyses may detect fine-scale changes not possible with community profiling techniques. Conclusions Our results suggest that the vernal pool microbial communities profiled here may rely on their metabolic plasticity for growth and survival when certain resources are limiting. The creation of these metagenomes also highlights how little is known about the effects of NO3

  15. Cascade photo production at CLAS

    SciTech Connect

    Goetz, John; Hicks, Kenneth H.

    2014-09-01

    The famous discovery of the Omega in 1964 put the quark model on firm ground and since then a lot of effort has been spent on mapping out the baryonic and mesonic states. Over the following decades, many excited baryons with light quarks (up, down and strange) have been measured, but by most predictions, only a small percentage of those expected have been found. In this talk, I will discuss a newly developing technique using an (unflavored) photon beam to excite protons to doubly-strange "Cascade" (Xi) states. Advantages of such an experiment and associated difficulties will be presented, along with recent results from the CLAS detector at Jefferson Lab in Virginia.

  16. Cascades on clique-based graphs.

    PubMed

    Hackett, Adam; Gleeson, James P

    2013-06-01

    We present an analytical approach to determining the expected cascade size in a broad range of dynamical models on the class of highly clustered random graphs introduced by Gleeson [J. P. Gleeson, Phys. Rev. E 80, 036107 (2009)]. A condition for the existence of global cascades is also derived. Applications of this approach include analyses of percolation, and Watts's model. We show how our techniques can be used to study the effects of in-group bias in cascades on social networks.

  17. Power Grid Defense Against Malicious Cascading Failure

    DTIC Science & Technology

    2014-05-01

    Power Grid Defense Against Malicious Cascading Failure Paulo Shakarian Dept. EECS and Network Science Center U.S. Military Academy West Point, NY...adversary looking to disrupt a power grid may look to target certain substations and sources of power genera- tion to initiate a cascading failure that...graph and introduce the cascad - ing failure game in which both the defender and attacker choose a subset of power stations such as to minimize (max

  18. Hydraulic machine with non-uniform cascade

    NASA Astrophysics Data System (ADS)

    Haluza, M.; Pochylý, F.; Habán, V.

    2012-11-01

    In this article is introduced the sentence of an extension of operational zone of hydraulic machines. The problems of its extending is based on the design of non-uniform cascade. The non-uniform cascade is connected with other factors. The change of own frequency of the runner of a hydraulic machine and pressure pulsations. The suitable construction of non-uniform cascade is introduced on the results of computational simulation and experiment.

  19. A rice fungal MAMP-responsive MAPK cascade regulates metabolic flow to antimicrobial metabolite synthesis

    PubMed Central

    Kishi-Kaboshi, Mitsuko; Okada, Kazunori; Kurimoto, Leona; Murakami, Shinya; Umezawa, Toshiaki; Shibuya, Naoto; Yamane, Hisakazu; Miyao, Akio; Takatsuji, Hiroshi; Takahashi, Akira; Hirochika, Hirohiko

    2010-01-01

    Plants recognize potential microbial pathogens through microbial-associated molecular patterns (MAMPs) and activate a series of defense responses, including cell death and the production of reactive oxygen species (ROS) and diverse anti-microbial secondary metabolites. Mitogen-activated protein kinase (MAPK) cascades are known to play a pivotal role in mediating MAMP signals; however, the signaling pathway from a MAPK cascade to the activation of defense responses is poorly understood. Here, we found in rice that the chitin elicitor, a fungal MAMP, activates two rice MAPKs (OsMPK3 and OsMPK6) and one MAPK kinase (OsMKK4). OsMPK6 was essential for the chitin elicitor-induced biosynthesis of diterpenoid phytoalexins. Conditional expression of the active form of OsMKK4 (OsMKK4DD) induced extensive alterations in gene expression, which implied dynamic changes of metabolic flow from glycolysis to secondary metabolite biosynthesis while suppressing basic cellular activities such as translation and cell division. OsMKK4DD also induced various defense responses, such as cell death, biosynthesis of diterpenoid phytoalexins and lignin but not generation of extracellular ROS. OsMKK4DD-induced cell death and expression of diterpenoid phytoalexin pathway genes, but not that of phenylpropanoid pathway genes, were dependent on OsMPK6. Collectively, the OsMKK4–OsMPK6 cascade plays a crucial role in reprogramming plant metabolism during MAMP-triggered defense responses. PMID:20525005

  20. Contingency Analysis of Cascading Line Outage Events

    SciTech Connect

    Thomas L Baldwin; Magdy S Tawfik; Miles McQueen

    2011-03-01

    As the US power systems continue to increase in size and complexity, including the growth of smart grids, larger blackouts due to cascading outages become more likely. Grid congestion is often associated with a cascading collapse leading to a major blackout. Such a collapse is characterized by a self-sustaining sequence of line outages followed by a topology breakup of the network. This paper addresses the implementation and testing of a process for N-k contingency analysis and sequential cascading outage simulation in order to identify potential cascading modes. A modeling approach described in this paper offers a unique capability to identify initiating events that may lead to cascading outages. It predicts the development of cascading events by identifying and visualizing potential cascading tiers. The proposed approach was implemented using a 328-bus simplified SERC power system network. The results of the study indicate that initiating events and possible cascading chains may be identified, ranked and visualized. This approach may be used to improve the reliability of a transmission grid and reduce its vulnerability to cascading outages.

  1. Dynamics of cavitating cascades and inducer pumps

    NASA Technical Reports Server (NTRS)

    Brennen, C. E.; Acosta, A. J.

    1981-01-01

    Report chronicles advances in understanding and predicting unsteady dynamic characteristics of cavitating cascades and inducer pumps. It includes bibliography of 19 papers authored between 1972 and 1980.

  2. [Microbial geochemical calcium cycle].

    PubMed

    Zavarzin, G A

    2002-01-01

    The participation of microorganisms in the geochemical calcium cycle is the most important factor maintaining neutral conditions on the Earth. This cycle has profound influence on the fate of inorganic carbon, and, thereby, on the removal of CO2 from the atmosphere. The major part of calcium deposits was formed in the Precambrian, when prokaryotic biosphere predominated. After that, calcium recycling based on biogenic deposition by skeletal organisms became the main process. Among prokaryotes, only a few representatives, e.g., cyanobacteria, exhibit a special calcium function. The geochemical calcium cycle is made possible by the universal features of bacteria involved in biologically mediated reactions and is determined by the activities of microbial communities. In the prokaryotic system, the calcium cycle begins with the leaching of igneous rock predominantly through the action of the community of organotrophic organisms. The release of carbon dioxide to the soil air by organotrophic aerobes leads to leaching with carbonic acid and soda salinization. Under anoxic conditions, of major importance is the organic acid production by primary anaerobes (fermentative microorganisms). Calcium carbonate is precipitated by secondary anaerobes (sulfate reducers) and to a smaller degree by methanogens. The role of the cyanobacterial community in carbonate deposition is exposed by stromatolites, which are the most common organo-sedimentary Precambrian structures. Deposition of carbonates in cyanobacterial mats as a consequence of photoassimilation of CO2 does not appear to be a significant process. It is argued that carbonates were deposited at the boundary between the "soda continent", which emerged as a result of subaerial leaching with carbonic acid, and the ocean containing Ca2+. Such ecotones provided favorable conditions for the development of the benthic cyanobacterial community, which was a precursor of stromatolites.

  3. Lifespans of Cascade Arc volcanoes

    NASA Astrophysics Data System (ADS)

    Calvert, A. T.

    2015-12-01

    Compiled argon ages reveal inception, eruptive episodes, ages, and durations of Cascade stratovolcanoes and their ancestral predecessors. Geologic mapping and geochronology show that most Cascade volcanoes grew episodically on multiple scales with periods of elevated behavior lasting hundreds of years to ca. 100 kyr. Notable examples include the paleomag-constrained, few-hundred-year-long building of the entire 15-20 km3 Shastina edifice at Mt. Shasta, the 100 kyr-long episode that produced half of Mt. Rainier's output, and the 30 kyr-long episode responsible for all of South and Middle Sister. Despite significant differences in timing and rates of construction, total durations of active and ancestral volcanoes at discrete central-vent locations are similar. Glacier Peak, Mt. Rainier, Mt. Adams, Mt. Hood, and Mt. Mazama all have inception ages of 400-600 ka. Mt. St. Helens, Mt. Jefferson, Newberry Volcano, Mt. Shasta and Lassen Domefield have more recent inception ages of 200-300 ka. Only the Sisters cluster and Mt. Baker have established eruptive histories spanning less than 50 kyr. Ancestral volcanoes centered 5-20 km from active stratocones appear to have similar total durations (200-600 kyr), but are less well exposed and dated. The underlying mechanisms governing volcano lifecycles are cryptic, presumably involving tectonic and plumbing changes and perhaps circulation cycles in the mantle wedge, but are remarkably consistent along the arc.

  4. Microbial methanogenesis in subsurface oil and coal.

    PubMed

    Meslé, Margaux; Dromart, Gilles; Oger, Philippe

    2013-11-01

    It is now clear that active methanogens are present in the deep-subsurface. This paper reviews microbial population structures and the biodegradation of organic compounds to methane in situ within oil reservoirs and coal deposits. It summarizes our current knowledge of methanogenes and methanogenesis, fermenters, synthrophs and microbial metabolism of complex organic compounds in these two widely occurring organic-rich subsurface environments. This review is not intended to be an exhaustive report of microbial diversity. Rather, it illustrates the similarities and differences between the two environments with specific examples, from the nature of the organic molecules to the methanogenic metabolic pathways and the structure of the microbial populations to demonstrate that widely diverging microbial populations show surprisingly similar metabolic capabilities.

  5. Cascading costs: an economic nitrogen cycle.

    PubMed

    Moomaw, William R; Birch, Melissa B L

    2005-12-01

    The chemical nitrogen cycle is becoming better characterized in terms of fluxes and reservoirs on a variety of scales. Galloway has demonstrated that reactive nitrogen can cascade through multiple ecosystems causing environmental damage at each stage before being denitrified to N2. We propose to construct a parallel economic nitrogen cascade (ENC) in which economic impacts of nitrogen fluxes can be estimated by the costs associated with each stage of the chemical cascade. Using economic data for the benefits of damage avoided and costs of mitigation in the Chesapeake Bay basin, we have constructed an economic nitrogen cascade for the region. Since a single tonne of nitrogen can cascade through the system, the costs also cascade. Therefore evaluating the benefits of mitigating a tonne of reactive nitrogen released needs to consider the damage avoided in all of the ecosystems through which that tonne would cascade. The analysis reveals that it is most cost effective to remove a tonne of nitrogen coming from combustion since it has the greatest impact on human health and creates cascading damage through the atmospheric, terrestrial, aquatic and coastal ecosystems. We will discuss the implications of this analysis for determining the most cost effective policy option for achieving environmental quality goals.

  6. Cascading costs: an economic nitrogen cycle.

    PubMed

    Moomaw, William R; Birch, Melissa B L

    2005-09-01

    The chemical nitrogen cycle is becoming better characterized in terms of fluxes and reservoirs on a variety of scales. Galloway has demonstrated that reactive nitrogen can cascade through multiple ecosystems causing environmental damage at each stage before being denitrified to N(2). We propose to construct a parallel economic nitrogen cascade (ENC) in which economic impacts of nitrogen fluxes can be estimated by the costs associated with each stage of the chemical cascade. Using economic data for the benefits of damage avoided and costs of mitigation in the Chesapeake Bay basin, we have constructed an economic nitrogen cascade for the region. Since a single ton of nitrogen can cascade through the system, the costs also cascade. Therefore evaluating the benefits of mitigating a ton of reactive nitrogen released needs to consider the damage avoided in all of the ecosystems through which that ton would cascade. The analysis reveals that it is most cost effective to remove a ton of nitrogen coming from combustion since it has the greatest impact on human health and creates cascading damage through the atmospheric, terrestrial, aquatic and coastal ecosystems. We will discuss the implications of this analysis for determining the most cost effective policy option for achieving environmental quality goals.

  7. Geothermal Resources of the Cascades: USGS Workshop

    NASA Astrophysics Data System (ADS)

    Guffanti, Marianne; Muffler, Patrick

    Since 1979, the Geothermal Research Program of the U.S. Geological Survey (USGS) has carried out a multidisciplinary research effort in the Cascade Range. The goal of this effort is to understand the tectonics, geology, and hydrology of the Cascades as a framework for characterizing and quantifying its geothermal resources. In May 1985, 5 years after an initial USGS-sponsored Cascades conference [Bacon, 1980], the Geothermal Research Program again sponsored a workshop on geothermal resources of the Cascade Range. Motivation for the workshop came primarily from the conviction within the Geothermal Research Program that the Cascade effort had advanced sufficiently that a forum with an explicitly geothermal focus was needed to promote the synthesis of ideas from diverse research projects. In addition, it was thought that research drilling plans in the Cascades that were being formulated by various other agencies also could benefit from the examination and evaluation that a workshop would foster. Accordingly, the workshop was designed to develop a common understanding of the status of various investigations among USGS and other scientists working in the Cascades, to stimulate renewed interest in understanding the geothermal regime of this volcanic chain, and to encourage the tectonic, geologic, and hydrologic synthesis necessary for a quantitative assessment of geothermal resources of the Cascades, a major objective of the USGS Geothermal Research Program.

  8. Cascade Harvest’ red raspberry

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cascade Harvest’ is a new floricane fruiting raspberry cultivar (Rubus idaeus L.) jointly released by Washington State University (WSU), Oregon State University (OSU) and the U.S. Department of Agriculture (USDA). ‘Cascade Harvest’ produces a high yield of large, firm fruit suited to machine harves...

  9. Microbial Metalloproteomics

    PubMed Central

    Hagedoorn, Peter-Leon

    2015-01-01

    Metalloproteomics is a rapidly developing field of science that involves the comprehensive analysis of all metal-containing or metal-binding proteins in a biological sample. The purpose of this review is to offer a comprehensive overview of the research involving approaches that can be categorized as inductively coupled plasma (ICP)-MS based methods, X-ray absorption/fluorescence, radionuclide based methods and bioinformatics. Important discoveries in microbial proteomics will be reviewed, as well as the outlook to new emerging approaches and research areas. PMID:28248278

  10. Microbial Metabolomics

    PubMed Central

    Tang, Jane

    2011-01-01

    Microbial metabolomics constitutes an integrated component of systems biology. By studying the complete set of metabolites within a microorganism and monitoring the global outcome of interactions between its development processes and the environment, metabolomics can potentially provide a more accurate snap shot of the actual physiological state of the cell. Recent advancement of technologies and post-genomic developments enable the study and analysis of metabolome. This unique contribution resulted in many scientific disciplines incorporating metabolomics as one of their “omics” platforms. This review focuses on metabolomics in microorganisms and utilizes selected topics to illustrate its impact on the understanding of systems microbiology. PMID:22379393

  11. Cascades in interdependent flow networks

    NASA Astrophysics Data System (ADS)

    Scala, Antonio; De Sanctis Lucentini, Pier Giorgio; Caldarelli, Guido; D'Agostino, Gregorio

    2016-06-01

    In this manuscript, we investigate the abrupt breakdown behavior of coupled distribution grids under load growth. This scenario mimics the ever-increasing customer demand and the foreseen introduction of energy hubs interconnecting the different energy vectors. We extend an analytical model of cascading behavior due to line overloads to the case of interdependent networks and find evidence of first order transitions due to the long-range nature of the flows. Our results indicate that the foreseen increase in the couplings between the grids has two competing effects: on the one hand, it increases the safety region where grids can operate without withstanding systemic failures; on the other hand, it increases the possibility of a joint systems' failure.

  12. The Geant4 Bertini Cascade

    SciTech Connect

    Wright, D. H.; Kelsey, M. H.

    2015-12-01

    One of the medium energy hadron–nucleus interaction models in the Geant4 simulation toolkit is based partly on the Bertini intranuclear cascade model. Since its initial appearance in the toolkit, this model has been largely re-written in order to extend its physics capabilities and to reduce its memory footprint. Physics improvements include extensions in applicable energy range and incident particle types, and improved hadron–nucleon cross-sections and angular distributions. Interfaces have also been developed which allow the model to be coupled with other Geant4 models at lower and higher energies. The inevitable speed reductions due to enhanced physics have been mitigated by memory and CPU efficiency improvements. Details of these improvements, along with selected comparisons of the model to data, are discussed.

  13. Cascade Joule-Thomson refrigerators

    NASA Technical Reports Server (NTRS)

    Tward, E.; Steyert, W. A.

    1983-01-01

    The design criteria for cascade Joule-Thomson refrigerators for cooling in the temperature range from 300 K to 4.2 K were studied. The systems considered use three or four refrigeration stages with various working gases to achieve the low temperatures. Each stage results in cooling to a progressively lower temperature and provides cooling at intermediate temperatures to remove the substantial amount of parasitic heat load encountered in a typical dewar. With careful dewar design considerable cooling can be achieved with moderate gas flows. For many applications, e.g., in the cooling of sensitive sensors, the fact that the refrigerator contains no moving parts and may be remotely located from the gas source is of considerable advantage. A small compressor suitable for providing the gas flows required was constructed.

  14. Physics of cosmological cascades and observable properties

    NASA Astrophysics Data System (ADS)

    Fitoussi, T.; Belmont, R.; Malzac, J.; Marcowith, A.; Cohen-Tanugi, J.; Jean, P.

    2017-04-01

    TeV photons from extragalactic sources are absorbed in the intergalactic medium and initiate electromagnetic cascades. These cascades offer a unique tool to probe the properties of the universe at cosmological scales. We present a new Monte Carlo code dedicated to the physics of such cascades. This code has been tested against both published results and analytical approximations, and is made publicly available. Using this numerical tool, we investigate the main cascade properties (spectrum, halo extension and time delays), and study in detail their dependence on the physical parameters (extragalactic magnetic field, extragalactic background light, source redshift, source spectrum and beaming emission). The limitations of analytical solutions are emphasized. In particular, analytical approximations account only for the first generation of photons and higher branches of the cascade tree are neglected.

  15. Stochastic annealing simulation of cascades in metals

    SciTech Connect

    Heinisch, H.L.

    1996-04-01

    The stochastic annealing simulation code ALSOME is used to investigate quantitatively the differential production of mobile vacancy and SIA defects as a function of temperature for isolated 25 KeV cascades in copper generated by MD simulations. The ALSOME code and cascade annealing simulations are described. The annealing simulations indicate that the above Stage V, where the cascade vacancy clusters are unstable,m nearly 80% of the post-quench vacancies escape the cascade volume, while about half of the post-quench SIAs remain in clusters. The results are sensitive to the relative fractions of SIAs that occur in small, highly mobile clusters and large stable clusters, respectively, which may be dependent on the cascade energy.

  16. Petrologic, tectonic, and metallogenic evolution of the Ancestral Cascades magmatic arc, Washington, Oregon, and northern California

    USGS Publications Warehouse

    du Bray, Edward A.; John, David A.

    2011-01-01

    reflects extensional tectonics that dominated during these periods of arc magmatism. Mineral deposits associated with ancestral Cascades arc rocks are uncommon; most are small and low grade relative to those found in other continental magmatic arcs. The small size, low grade, and dearth of deposits, especially in the southern two-thirds of the ancestral arc, probably reflect many factors, the most important of which may be the prevalence of extensional tectonics within this arc domain during this magmatic episode. Progressive clockwise rotation of the forearc block west of the evolving Oregon part of the ancestral Cascades magmatism produced an extensional regime that did not foster significant mineral deposit formation. In contrast, the Washington arc domain developed in a transpressional to mildly compressive regime that was more conducive to magmatic processes and hydrothermal fluid channeling critical to deposit formation. Small, low-grade porphyry copper deposits in the northern third of the ancestral Cascades arc segment also may be a consequence of more mature continental crust, including a Mesozoic component, beneath Washington north of Mount St. Helens.

  17. The body size dependence of trophic cascades.

    PubMed

    DeLong, John P; Gilbert, Benjamin; Shurin, Jonathan B; Savage, Van M; Barton, Brandon T; Clements, Christopher F; Dell, Anthony I; Greig, Hamish S; Harley, Christopher D G; Kratina, Pavel; McCann, Kevin S; Tunney, Tyler D; Vasseur, David A; O'Connor, Mary I

    2015-03-01

    Trophic cascades are indirect positive effects of predators on resources via control of intermediate consumers. Larger-bodied predators appear to induce stronger trophic cascades (a greater rebound of resource density toward carrying capacity), but how this happens is unknown because we lack a clear depiction of how the strength of trophic cascades is determined. Using consumer resource models, we first show that the strength of a trophic cascade has an upper limit set by the interaction strength between the basal trophic group and its consumer and that this limit is approached as the interaction strength between the consumer and its predator increases. We then express the strength of a trophic cascade explicitly in terms of predator body size and use two independent parameter sets to calculate how the strength of a trophic cascade depends on predator size. Both parameter sets predict a positive effect of predator size on the strength of a trophic cascade, driven mostly by the body size dependence of the interaction strength between the first two trophic levels. Our results support previous empirical findings and suggest that the loss of larger predators will have greater consequences on trophic control and biomass structure in food webs than the loss of smaller predators.

  18. Tracking multiple sediment cascades at the river network scale identifies controls and emerging patterns of sediment connectivity

    NASA Astrophysics Data System (ADS)

    Schmitt, Rafael J. P.; Bizzi, Simone; Castelletti, Andrea

    2016-05-01

    Sediment connectivity in fluvial networks results from the transfer of sediment between multiple sources and sinks. Connectivity scales differently between all sources and sinks as a function of distance, source grain size and sediment supply, network topology and topography, and hydrologic forcing. In this paper, we address the challenge of quantifying sediment connectivity and its controls at the network scale. We expand the concept of a single, catchment-scale sediment cascade toward representing sediment transport from each source as a suite of individual cascading processes. We implement this approach in the herein presented CAtchment Sediment Connectivity And DElivery (CASCADE) modeling framework. In CASCADE, each sediment cascade establishes connectivity between a specific source and its multiple sinks. From a source perspective, the fate of sediment is controlled by its detachment and downstream transport capacity, resulting in a specific trajectory of transfer and deposition. From a sink perspective, the assemblage of incoming cascades defines provenance, sorting, and magnitude of sediment deliveries. At the network scale, this information reveals emerging patterns of connectivity and the location of bottlenecks, where disconnectivity occurs. In this paper, we apply CASCADE to quantitatively analyze the sediment connectivity of a major river system in SE Asia. The approach provides a screening model that can support analyses of large, poorly monitored river systems. We test the sensitivity of CASCADE to various parameters and identify the distribution of energy between the multiple, simultaneously active sediment cascades as key control behind network sediment connectivity. To conclude, CASCADE enables a quantitative, spatially explicit analysis of network sediment connectivity with potential applications in both river science and management.

  19. Source Tracking of Nitrous Oxide using A Quantum Cascade ...

    EPA Pesticide Factsheets

    Nitrous oxide is an important greenhouse gas and ozone depleting substance. Nitrification and denitrification are two major biological pathways that are responsible for soil emissions of N2O. However, source tracking of in-situ or laboratory N2O production is still challenging to soil scientists. The objective of this study was to introduce the use of a new technology, quantum cascade laser (QCL) spectroscopy, which allows for significantly improved accuracy and precision to continuously measure real-time N2O for source tracking. This data provides important emission inventory information to air quality and atmospheric chemistry models. The task demonstrated that QCL spectroscopy can measure the flux of nitrous oxide at ambient and well as elevated concentrations in real time. The fractionation of the nitrous oxide produced by microbial processing of nitrate can be measured and characterized as isotopic signatures related to the nitrifying or denitrifying state of the microbial communities. This has important implications for monitoring trace gases in the atmosphere. The data produced by this system will provide clients including the air quality and climate change communities with needed information on the sources and strengths of N2O emissions for modeling and research into mitigation strategies to reduce overall GHG emissions in agricultural systems.

  20. Living With Volcanic Risk in the Cascades

    USGS Publications Warehouse

    Dzurisin, Daniel; Stauffer, Peter H.; Hendley, James W.

    1997-01-01

    The Cascade Range of the Pacific Northwest has more than a dozen potentially active volcanoes. Cascade volcanoes tend to erupt explosively, and on average two eruptions occur per century?the most recent were at Mount St. Helens, Washington (1980?86 and 2004?8), and Lassen Peak, California (1914?17). To help protect the Pacific Northwest?s rapidly expanding population, USGS scientists at the Cascades Volcano Observatory in Vancouver, Washington, monitor and assess the hazards posed by the region?s volcanoes.

  1. Cascades on clique-based graphs

    NASA Astrophysics Data System (ADS)

    Hackett, Adam; Gleeson, James P.

    2013-06-01

    We present an analytical approach to determining the expected cascade size in a broad range of dynamical models on the class of highly clustered random graphs introduced by Gleeson [J. P. Gleeson, Phys. Rev. EPLEEE81539-375510.1103/PhysRevE.80.036107 80, 036107 (2009)]. A condition for the existence of global cascades is also derived. Applications of this approach include analyses of percolation, and Watts's model. We show how our techniques can be used to study the effects of in-group bias in cascades on social networks.

  2. Cascade Screening in Familial Hypercholesterolemia: Advancing Forward.

    PubMed

    Santos, Raul D; Frauches, Thiago S; Chacra, Ana P M

    2015-01-01

    Familial hypercholesterolemia is a genetic disorder associated with elevated LDL-cholesterol and high lifetime cardiovascular risk. Both clinical and molecular cascade screening programs have been implemented to increase early definition and treatment. In this systematic review, we discuss the main issues found in 65 different articles related to cascade screening and familial hypercholesterolemia, covering a range of topics including different types/strategies, considerations both positive and negative regarding cascade screening in general and associated with the different strategies, cost and coverage consideration, direct and indirect contact with patients, public policy around life insurance and doctor-patient confidentiality, the "right to know," and public health concerns regarding familial hypercholesterolemia.

  3. Nonlocal effects and countermeasures in cascading failures.

    PubMed

    Witthaut, Dirk; Timme, Marc

    2015-09-01

    We study the propagation of cascading failures in complex supply networks with a focus on nonlocal effects occurring far away from the initial failure. It is shown that a high clustering and a small average path length of a network generally suppress nonlocal overloads. These properties are typical for many real-world networks, often called small-world networks, such that cascades propagate mostly locally in these networks. Furthermore, we analyze the spatial aspects of countermeasures based on the intentional removal of additional edges. Nonlocal actions are generally required in networks that have a low redundancy and are thus especially vulnerable to cascades.

  4. Gust Response Analysis of a Turbine Cascade

    NASA Technical Reports Server (NTRS)

    Gorla, R. S. R.; Reddy, T. S. R.; Reddy, D. R.; Kurkov, A. P.

    2001-01-01

    A study was made of the gust response of an annular turbine cascade using a two-dimensional Navier Stokes code. The time-marching CFD code, NPARC, was used to calculate the unsteady forces due to the fluid flow. The computational results were compared with a previously published experimental data for the annular cascade reported in the literature. Reduced frequency, Mach number and angle of incidence were varied independently and the gust velocity was sinusoidal. For the high inlet velocity case, the cascade was nearly choked.

  5. Cascading blockages in channel bundles.

    PubMed

    Barré, C; Talbot, J

    2015-11-01

    Flow in channel networks may involve a redistribution of flux following the blockage or failure of an individual link. Here we consider a simplified model consisting of N(c) parallel channels conveying a particulate flux. Particles enter these channels according to a homogeneous Poisson process and an individual channel blocks if more than N particles are simultaneously present. The behavior of the composite system depends strongly on how the flux of entering particles is redistributed following a blockage. We consider two cases. In the first, the intensity on each open channel remains constant while in the second the total intensity is evenly redistributed over the open channels. We obtain exact results for arbitrary N(c) and N for a system of independent channels and for arbitrary N(c) and N=1 for coupled channels. For N>1 we present approximate analytical as well as numerical results. Independent channels block at a decreasing rate due to a simple combinatorial effect, while for coupled channels the interval between successive blockages remains constant for N=1 but decreases for N>1. This accelerating cascade is due to the nonlinear dependence of the mean blocking time of a single channel on the entering particle flux that more than compensates for the decrease in the number of active channels.

  6. Cascading blockages in channel bundles

    NASA Astrophysics Data System (ADS)

    Barré, C.; Talbot, J.

    2015-11-01

    Flow in channel networks may involve a redistribution of flux following the blockage or failure of an individual link. Here we consider a simplified model consisting of Nc parallel channels conveying a particulate flux. Particles enter these channels according to a homogeneous Poisson process and an individual channel blocks if more than N particles are simultaneously present. The behavior of the composite system depends strongly on how the flux of entering particles is redistributed following a blockage. We consider two cases. In the first, the intensity on each open channel remains constant while in the second the total intensity is evenly redistributed over the open channels. We obtain exact results for arbitrary Nc and N for a system of independent channels and for arbitrary Nc and N =1 for coupled channels. For N >1 we present approximate analytical as well as numerical results. Independent channels block at a decreasing rate due to a simple combinatorial effect, while for coupled channels the interval between successive blockages remains constant for N =1 but decreases for N >1 . This accelerating cascade is due to the nonlinear dependence of the mean blocking time of a single channel on the entering particle flux that more than compensates for the decrease in the number of active channels.

  7. Quantum Cascade Laser Frequency Combs

    NASA Astrophysics Data System (ADS)

    Faist, Jérôme; Villares, Gustavo; Scalari, Giacomo; Rösch, Markus; Bonzon, Christopher; Hugi, Andreas; Beck, Mattias

    2016-06-01

    It was recently demonstrated that broadband quantum cascade lasers can operate as frequency combs. As such, they operate under direct electrical pumping at both mid-infrared and THz frequencies, making them very attractive for dual-comb spectroscopy. Performance levels are continuously improving, with average powers over 100mW and frequency coverage of 100 cm-1 in the mid-infrared region. In the THz range, 10mW of average power and 600 GHz of frequency coverage are reported. As a result of the very short upper state lifetime of the gain medium, the mode proliferation in these sources arises from four-wave mixing rather than saturable absorption. As a result, their optical output is characterized by the tendency of small intensity modulation of the output power, and the relative phases of the modes to be similar to the ones of a frequency modulated laser. Recent results include the proof of comb operation down to a metrological level, the observation of a Schawlow-Townes broadened linewidth, as well as the first dual-comb spectroscopy measurements. The capability of the structure to integrate monothically nonlinear optical elements as well as to operate as a detector shows great promise for future chip integration of dual-comb systems.

  8. Cascade-able spin torque logic gates with input-output isolation

    NASA Astrophysics Data System (ADS)

    Nikonov, Dmitri E.; Manipatruni, Sasikanth; Young, Ian A.

    2015-06-01

    Spin torque majority gate (STMG) is one of the promising options for beyond-complementary metal-oxide-semiconductor non-volatile logic circuits for normally-off computing. Modeling of prior schemes demonstrated logic completeness using majority operation and nonlinear transfer characteristics. However significant problems arose with cascade-ability and input output isolation manifesting as domain walls (DWs) stopping, reflecting off ends of wires or propagating back to the inputs. We introduce a new scheme to enable cascade-ability and isolation based on (a) in-plane DW automotion in interconnects, (b) exchange coupling of magnetization between two FM layers, and (c) ‘round-about’ topology for the majority gate. We performed micro-magnetic simulations that demonstrate switching operation of this STMG scheme. These circuits were verified to enable isolation of inputs from output signals and to be cascade-able without limitations.

  9. Modeling and analysis of cascade solar cells

    NASA Technical Reports Server (NTRS)

    Ho, F. D.

    1986-01-01

    A brief review is given of the present status of the development of cascade solar cells. It is known that photovoltaic efficiencies can be improved through this development. The designs and calculations of the multijunction cells, however, are quite complicated. The main goal is to find a method which is a compromise between accuracy and simplicity for modeling a cascade solar cell. Three approaches are presently under way, among them (1) equivalent circuit approach, (2) numerical approach, and (3) analytical approach. Here, the first and the second approaches are discussed. The equivalent circuit approach using SPICE (Simulation Program, Integrated Circuit Emphasis) to the cascade cells and the cascade-cell array is highlighted. The methods of extracting parameters for modeling are discussed.

  10. Displacement Cascade Damage Production in Metals

    SciTech Connect

    Stoller, Roger E; Malerba, Lorenzo; Nordlund, Kai

    2015-01-01

    Radiation-induced changes in microstructure and mechanical properties in structural materials are the result of a complex set of physical processes initiated by the collision between an energetic particle (neutron or ion) and an atom in the lattice. This primary damage event is called an atomic displacement cascade. The simplest description of a displacement cascade is to view it as a series of many billiard-ball-like elastic collisions among the atoms in the material. This chapter describes the formation and evolution of this primary radiation damage mechanism to provide an overview of how stable defects are formed by displacement cascades, as well as the nature and morphology of the defects themselves. The impact of the relevant variables such as cascade energy and irradiation temperature is discussed, and defect formation in different materials is compared.

  11. Network effects, cascades and CCP interoperability

    NASA Astrophysics Data System (ADS)

    Feng, Xiaobing; Hu, Haibo; Pritsker, Matthew

    2014-03-01

    To control counterparty risk, financial regulations such as the Dodd Frank Act are increasingly requiring standardized derivatives trades to be cleared by central counterparties (CCPs). It is anticipated that in the near-term future, CCPs across the world will be linked through interoperability agreements that facilitate risk-sharing but also serve as a conduit for transmitting shocks. This paper theoretically studies a network with CCPs that are linked through interoperability arrangements, and studies the properties of the network that contribute to cascading failures. The magnitude of the cascading is theoretically related to the strength of network linkages, the size of the network, the logistic mapping coefficient, a stochastic effect and CCP's defense lines. Simulations indicate that larger network effects increase systemic risk from cascading failures. The size of the network N raises the threshold value of shock sizes that are required to generate cascades. Hence, the larger the network, the more robust it will be.

  12. On Asymmetric Classifier Training for Detector Cascades

    SciTech Connect

    Gee, Timothy Felix

    2006-01-01

    This paper examines the Asymmetric AdaBoost algorithm introduced by Viola and Jones for cascaded face detection. The Viola and Jones face detector uses cascaded classifiers to successively filter, or reject, non-faces. In this approach most non-faces are easily rejected by the earlier classifiers in the cascade, thus reducing the overall number of computations. This requires earlier cascade classifiers to very seldomly reject true instances of faces. To reflect this training goal, Viola and Jones introduce a weighting parameter for AdaBoost iterations and show it enforces a desirable bound. During their implementation, a modification to the proposed weighting was introduced, while enforcing the same bound. The goal of this paper is to examine their asymmetric weighting by putting AdaBoost in the form of Additive Regression as was done by Friedman, Hastie, and Tibshirani. The author believes this helps to explain the approach and adds another connection between AdaBoost and Additive Regression.

  13. Secondary factors influencing cascade damage formation

    NASA Astrophysics Data System (ADS)

    Stoller, Roger E.; Guiriec, Sylvain G.

    2004-08-01

    Primary cascade damage production in iron has been extensively investigated by molecular dynamics, and the average defect production as a function of cascade energy and temperature is well characterized. However, preliminary results indicate several factors alter `normal' cascade evolution, leading to quite different defect production behavior. Further investigation of three such factors has been carried out: (1) primary knock-on atom (PKA) direction, (2) nearby free surfaces, and (3) pre-existing effects. Results of the investigation confirm these factors significantly impact damage production. Effects include: enhanced defect survival for PKA directions lying in close-packed {1 1 0} planes, increased point defect clustering and larger defect clusters in cascades initiated near a surface, and reduced defect survival in material containing defects. The origin and implications of these effects are discussed relative to the interpretation of certain experimental observations and parameters used in other modeling studies.

  14. Spatial filtering by using cascading plasmonic gratings.

    PubMed

    Wang, Chih-Ming; Chang, Yia-Chung; Tsai, Din Ping

    2009-04-13

    In this study, the optical properties of a plasmonic multilayer structure, consisting of two longitudinally cascaded gratings with a half pitch off-set, are investigated. The proposed structure, which is a system mixing extended and localized surface plasmon, forms transversely cascaded metal/insulator/metal cavities. The angle dependent reflection spectrum of the proposed structure displays a resonance peak at a specific angle. The full-width at half maximum (FWHM) of the resonant peak is smaller than 3 degrees. The angular dispersion of the cascading plasmonic gratings is about d theta/d lambda =0.15 degrees/nm. The cascading plasmonic gratings can be used as a spatial filter to improve the spatial coherence of a light source.

  15. Determining the direction of a turbulent cascade

    NASA Astrophysics Data System (ADS)

    Goldburg, Walter; Cerbus, Rory

    2015-11-01

    In two-dimensional (2D) turbulence, one expects a cascade of energy to larger spatial scales, while the enstrophy cascade is to smaller ones. Here we present a new tool to study cascades using simple ideas borrowed from information theory. It is entirely unrelated to the Navier-Stoke's equations or any scaling arguments. We use the conditional entropy (conditioned uncertainty) of velocity fluctuations on one scale conditioned on another larger or smaller scale. If the entropy is larger after conditioning on larger scales rather than smaller ones, then the cascade is to smaller scales. By varying the scale of the velocity fluctuations used in the conditioning, we can test both direction and locality. We use these tools on experimental data taken from a flowing soap film, an approximately 2D turbulent flow. The Reynolds number is varied over a wide range to determine the entropy's scaling with Reynolds number OIST.

  16. Innovation cascades: artefacts, organization and attributions

    PubMed Central

    2016-01-01

    Innovation cascades inextricably link the introduction of new artefacts, transformations in social organization, and the emergence of new functionalities and new needs. This paper describes a positive feedback dynamic, exaptive bootstrapping, through which these cascades proceed, and the characteristics of the relationships in which the new attributions that drive this dynamic are generated. It concludes by arguing that the exaptive bootstrapping dynamic is the principal driver of our current Innovation Society. PMID:26926284

  17. Cascaded Second-Order Nonlinearities in Waveguides.

    NASA Astrophysics Data System (ADS)

    Sundheimer, Michael Lee

    The cascaded second-order nonlinearity arising from the second-harmonic generation process in noncentrosymmetric media is a novel approach to achieving the nonlinear phase shifts required for all-optical signal processing. The research presented in this dissertation demonstrated and measured the cascaded second-order nonlinearity for the first time in viable integrated optical waveguide formats. Cascaded self-phase modulation was measured in potassium titanyl phosphate (KTiOPO_4 or KTP) segmented quasi-phasematched waveguides at wavelengths near 855 nm and in the optical fiber telecommunications window near 1.585 μm using picosecond and femtosecond pulses, respectively. Spectral modulation and broadening were observed on the output fundamental spectrum and compared to predictions from pulsed second -harmonic generation theory under conditions of group-velocity mismatch (temporal walk-off) and group-velocity dispersion. Peak cascaded phase shifts of the fundamental of approximately pi at 855 nm were inferred with 690 W of peak guided power. Peak cascaded phase shifts of approximately pi/2 were inferred at 1.585 μm with 760 W of peak power in the guide. Direct interferometric measurements of the magnitude and sign of the cascaded nonlinear phase shift of the fundamental were performed in temperature-tuned lithium niobate (LiNbO _3) channel waveguides at 1.32 mum. The cascaded phase shift was shown to change sign upon passing through the phasematching condition, as required by theory. Peak cascaded phase shifts of +0.53 pi and -0.13 pi were measured for 86 W peak power in these waveguides. A non-uniform temperature profile along the waveguide led to a non-uniform wavevector-mismatch along the guide, resulting in an enhanced positive phase shift and an increased temperature bandwidth for the phase shift. The phase shifts achieved in this research are large enough to be suitable for some all-optical signal processing functions.

  18. Supersonic Chordwise Bending Flutter in Cascades

    DTIC Science & Technology

    1975-05-31

    such a flutter boundary can be made by utilizing the trend lines predicted from a supersonic analysis based on supersonic cascade theory (Appendix I...bonding agent was injected via hypodermic needles after the blade tabs were properly inserted, The integrity and repeatability of the mounting of the indi...in conjunction with NASTRAN predictions and supersonic cascade aerodynamic computa- tions. Comparisons between theory and experiment are discussed. DD

  19. Experimental determination of unsteady blade element aerodynamics in cascades. Volume 2: Translation mode cascade

    NASA Technical Reports Server (NTRS)

    Riffel, R. E.; Rothrock, M. D.

    1980-01-01

    A two dimensional cascade of harmonically oscillating airfoils was designed to model a near tip section from a rotor which was known to have experienced supersonic translational model flutter. This five bladed cascade had a solidity of 1.52 and a setting angle of 0.90 rad. Unique graphite epoxy airfoils were fabricated to achieve the realistic high reduced frequency level of 0.15. The cascade was tested over a range of static pressure ratios approximating the blade element operating conditions of the rotor along a constant speed line which penetrated the flutter boundary. The time steady and time unsteady flow field surrounding the center cascade airfoil were investigated.

  20. Emergence of event cascades in inhomogeneous networks

    NASA Astrophysics Data System (ADS)

    Onaga, Tomokatsu; Shinomoto, Shigeru

    2016-09-01

    There is a commonality among contagious diseases, tweets, and neuronal firings that past events facilitate the future occurrence of events. The spread of events has been extensively studied such that the systems exhibit catastrophic chain reactions if the interaction represented by the ratio of reproduction exceeds unity; however, their subthreshold states are not fully understood. Here, we report that these systems are possessed by nonstationary cascades of event-occurrences already in the subthreshold regime. Event cascades can be harmful in some contexts, when the peak-demand causes vaccine shortages, heavy traffic on communication lines, but may be beneficial in other contexts, such that spontaneous activity in neural networks may be used to generate motion or store memory. Thus it is important to comprehend the mechanism by which such cascades appear, and consider controlling a system to tame or facilitate fluctuations in the event-occurrences. The critical interaction for the emergence of cascades depends greatly on the network structure in which individuals are connected. We demonstrate that we can predict whether cascades may emerge, given information about the interactions between individuals. Furthermore, we develop a method of reallocating connections among individuals so that event cascades may be either impeded or impelled in a network.

  1. Emergence of event cascades in inhomogeneous networks

    PubMed Central

    Onaga, Tomokatsu; Shinomoto, Shigeru

    2016-01-01

    There is a commonality among contagious diseases, tweets, and neuronal firings that past events facilitate the future occurrence of events. The spread of events has been extensively studied such that the systems exhibit catastrophic chain reactions if the interaction represented by the ratio of reproduction exceeds unity; however, their subthreshold states are not fully understood. Here, we report that these systems are possessed by nonstationary cascades of event-occurrences already in the subthreshold regime. Event cascades can be harmful in some contexts, when the peak-demand causes vaccine shortages, heavy traffic on communication lines, but may be beneficial in other contexts, such that spontaneous activity in neural networks may be used to generate motion or store memory. Thus it is important to comprehend the mechanism by which such cascades appear, and consider controlling a system to tame or facilitate fluctuations in the event-occurrences. The critical interaction for the emergence of cascades depends greatly on the network structure in which individuals are connected. We demonstrate that we can predict whether cascades may emerge, given information about the interactions between individuals. Furthermore, we develop a method of reallocating connections among individuals so that event cascades may be either impeded or impelled in a network. PMID:27625183

  2. Microbial Communities Associated with Biogenic Iron Oxide Mineralization in Circumneutral pH Environments

    NASA Astrophysics Data System (ADS)

    Chan, C. S.; Banfield, J. F.

    2002-12-01

    Lithotrophic growth on iron is a metabolism that has been found in a variety of neutral pH environments and is likely important in sustaining life in microaerophilic solutions, especially those low in organics. The composition of the microbial communities, especially the organisms that are responsible for iron oxidation, and carbon and nitrogen fixation, are not known, yet the ability to recognize these contributions is vital to our understanding of iron cycling in natural environments. Our approach has been to study the microbial community structure, mineralogy, and geochemistry of ~20 cm thick, 100's meters long, fluffy iron oxide-encrusted biological mats growing in the Piquette Mine tunnel, and to compare the results to those from geochemically similar environments. In situ measurements (Hydrolab) and geochemical characterization of bulk water samples and peepers (dialysis sampling vials) indicate that the environment is microaerobic, with micromolar levels of iron, high carbonate and sulfate, and typical groundwater nitrate and nitrite concentrations. 16S rDNA clone libraries show that the microbial mat and water contain communities with considerable diversity within the Bacterial domain, a large proportion of Nitrospira and Betaproteobacteria, and no Archaea. Because clone library data are not necessarily indicative of actual abundance, fluorescence in-situ hybridization (FISH) was performed on water, mat, and sediment samples from the Piquette mine and two circumneutral iron- and carbonate-rich springs in the Oregon Cascade Range. Domain- and phylum-level probes were chosen based on the clone library results (Nitrospira, Beta- and Gammaproteobacteria, Acidobacteria, Actinobacteria, Chloroflexi, and Planctomyces). FISH data reveal spatial associations between specific microbial groups and mineralized structures. The organisms responsible for making the mineralized sheaths that compose the bulk of the iron oxide mat are Betaproteobacteria (probably Leptothrix

  3. Duality cascade in brane inflation

    SciTech Connect

    Bean, Rachel; Chen Xingang; Hailu, Girma; Henry Tye, S-H; Xu Jiajun E-mail: xgchen@mit.edu E-mail: tye@lepp.cornell.edu

    2008-03-15

    We show that brane inflation is very sensitive to tiny sharp features in extra dimensions, including those in the potential and in the warp factor. This can show up as observational signatures in the power spectrum and/or non-Gaussianities of the cosmic microwave background radiation (CMBR). One general example of such sharp features is a succession of small steps in a warped throat, caused by Seiberg duality cascade using gauge/gravity duality. We study the cosmological observational consequences of these steps in brane inflation. Since the steps come in a series, the prediction of other steps and their properties can be tested by future data and analysis. It is also possible that the steps are too close to be resolved in the power spectrum, in which case they may show up only in the non-Gaussianity of the CMB temperature fluctuations and/or EE polarization. We study two cases. In the slow-roll scenario, where steps appear in the inflaton potential, the sensitivity of brane inflation to the height and width of the steps is increased by several orders of magnitude compared to that in previously studied large field models. In the IR DBI scenario, where steps appear in the warp factor, we find that the glitches in the power spectrum caused by these sharp features are generally small or even unobservable, but associated distinctive non-Gaussianity can be large. Together with its large negative running of the power spectrum index, this scenario clearly illustrates how rich and different a brane inflationary scenario can be when compared to generic slow-roll inflation. Such distinctive stringy features may provide a powerful probe of superstring theory.

  4. Efficiency and spatial resolution of the CASCADE thermal neutron detector

    NASA Astrophysics Data System (ADS)

    Köhli, M.; Allmendinger, F.; Häußler, W.; Schröder, T.; Klein, M.; Meven, M.; Schmidt, U.

    2016-08-01

    We report on the CASCADE project - a detection system, which has been designed for the purposes of neutron Spin Echo spectroscopy and which is continuously further developed and adapted to various applications. It features 2D spatially resolved detection of thermal neutrons at high rates. The CASCADE detector is composed of a stack of solid 10B coated Gas Electron Multiplier foils, which serve both as a neutron converter and as an amplifier for the primary ionization deposited in the standard counting gas environment. This multi-layer setup efficiently increases the detection efficiency and by extracting the signal of the charge traversing the stack the conversion layer can be identified allowing a precise determination of the time-of-flight. The spatial resolution is found by optical contrast determination to be σ =(1.39 ± 0.05) mm and by divergence corrected aperture measurements σ =(1.454 ± 0.007) mm , which is in agreement with the simulated detector model. Furthermore this enabled to investigate and describe the non-Gaussian resolution function. At the HEiDi diffractometer the absolute detection efficiency has been studied. At 0.6 Å for the 6 layer detector, which is currently part of the RESEDA spectrometer, an efficiency of 7.8% has been measured, which by means of Monte Carlo simulations translates to (21.0±1.5)% for thermal neutrons at 1.8 Å and (46.9±3.3)% at 5.4 Å.

  5. CASCADE - a multi-layer Boron-10 neutron detection system

    NASA Astrophysics Data System (ADS)

    Köhli, M.; Klein, M.; Allmendinger, F.; Perrevoort, A.-K.; Schröder, T.; Martin, N.; Schmidt, C. J.; Schmidt, U.

    2016-09-01

    The globally increased demand for helium-3 along with the limited availability of this gas calls for the development of alternative technologies for the large ESS instrumentation pool. We report on the CASCADE Project - a novel detection system, which has been developed for the purposes of neutron spin echo spectroscopy. It features 2D spatially resolved detection of thermal neutrons at high rates. The CASCADE detector is composed of a stack of solid 10B coated Gas Electron Multiplier foils, which serve both as a neutron converter and as an amplifier for the primary ionization deposited in the standard Argon-CO2 counting gas environment. This multi-layer setup efficiently increases the detection efficiency and serves as a helium-3 alternative. It has furthermore been possible to extract the signal of the charge traversing the stack to identify the very thin conversion layer of about 1 micrometer. This allows the precise determination of the time-of-flight, necessary for the application in MIEZE spin echo techniques.

  6. Snow chemistry of the Cascade-Sierra Nevada Mountains

    USGS Publications Warehouse

    Laird, L.B.; Taylor, H.E.; Kennedy, V.C.

    1986-01-01

    This investigation assesses geographic variations in atmospheric deposition in Washington, Oregon, and California using snow cores from the Cascade-Sierra Nevada Mountains, collected from late February to mid-March 1983. A statistical analysis of the analytical and sampling precision was made. The snowpack in the higher Cascades and Sierra Nevada is not strongly influenced by anthropogenic activities at present. The pH of snow samples ranges from 5.11 to 5.88. Sulfate and nitrate correlate with H+ in some segments of the sample traverse. The SO4 data show apparent influence from major source areas in Washington and California; nitrate does not. An apparent decrease in NH4 in snow in Washington and California suggests atmospheric interactions resulting in the removal of NH4. The NH4 reduction raises questions about nutrient supply to the mountain vegetation. Heavy-metal correlations included Cd, Cu, and Fe with Pb, and Mn with K and DOC, among others. No correlation was found between constituents and snow-water content.

  7. Snow chemistry of the Cascade-Sierra Nevada Mountains

    SciTech Connect

    Laird, L.B.; Taylor, H.E.; Kennedy, V.C.

    1986-03-01

    This investigation assesses geographic variations in atmospheric deposition in Washington, Oregon, and California using snow cores from the Cascade-Sierra Nevada Mountains, collected from late February to mid-March 1983. A statistical analysis of the analytical and sampling precision was made. The snowpack in the higher Cascades and Sierra Nevada is not strongly influenced by anthropogenic activities at present. The pH of snow samples ranges from 5.11 to 5.88. Sulfate and nitrate correlate with H/sup +/ in some segments of the sample traverse. The SO/sub 4/ data show apparent influence from major source areas in Washington and California; nitrate does not. An apparent decrease in NH/sub 4/ in snow in Washington and California suggests atmospheric interactions resulting in the removal of NH/sub 4/. The NH/sub 4/ reduction raises questions about nutrient supply in the mountain vegetation. Heavy-metal correlations included Cd, Cu, and Fe with Pb, and Mn with K and DOC, among others. No correlation was found between constituents and snow-water content. 47 references, 11 figures, 7 tables.

  8. Lead-isotopic data from sulfide minerals from the Cascade Range, Oregon and Washington

    USGS Publications Warehouse

    Church, S.E.; LeHuray, A.P.; Grant, A.R.; Delevaux, M.H.; Gray, J.E.

    1986-01-01

    Lead-isotopic studies of mineral deposits associated with Tertiary plutons found in the Cascade Range of Oregon and Washington demonstrate a rather uniform isotopic composition in various sulfide minerals ( 206Pb 204Pb = 18.84 to 19.05; 207Pb 204Pb = 15.57 to 15.62; 208Pb 204Pb = 38.49 to 38.74), show less variation than data from the volcanic rocks of the Cascade Range and fall within the mixing array defined by the MORB regression line and continental sediments. An evaluation of the role of crustal assimilation by hydrothermal convection during emplacement was made on five sulfide deposits associated with a single composite batholith, the Cloudy Pass pluton. The Pb-isotopic data and mass balance calculations suggest that only minor amounts of the lead were derived from the overlying Precambrian (?) Swakane Biotite Gneiss during emplacement. The bulk of the metal that occurs in sulfide deposits in the Cascade mineral belt appears to have been derived from subducted continental detritus. The variation of the Pb-isotopic signature of Sulfides from specific districts or deposits suggests that there is a correlation with age and structure of the crust. 206Pb 204Pb is greater than 18.92 in northern Washington and southern Oregon where deposits have intruded Mesozoic or older crust. However, the ore deposits between the northern Oregon border and central Oregon, south of Eugene, have intruded younger crust composed largely of mafic and andesitic volcanic rocks and 206Pb 204Pb lies between 18.84 and 18.92. This region, previously called the Columbia embayment, appears to be underlain by Tertiary volcanic rocks. Lead-isotopic data may be used to define the boundaries between discontinuous blocks of Mesozoic crust and Tertiary volcanic cover. ?? 1986.

  9. Harmonic cascade FEL designs for LUX

    SciTech Connect

    Penn, G.; Reinsch, M.; Wurtele, J.; Corlett, J.N.; Fawley, W.M.; Zholents, A.; Wan, W.

    2004-07-16

    LUX is a design concept for an ultrafast X-ray science facility, based on an electron beam accelerated to GeV energies in are circulating linac. Included in the design are short duration (200 fs or shorter FWHM) light sources using multiple stages of higher harmonic generation, seeded by a 200-250 nm laser of similar duration. This laser modulates the energy of a group of electrons within the electron bunch; this section of the electron bunch then produces radiation at a higher harmonic after entering a second, differently tuned undulator. Repeated stages in a cascade yield increasing photon energies up to 1 keV. Most of the undulators in the cascade operate in the low-gain FEL regime. Harmonic cascades have been designed for each pass of the recirculating linac up to a final electron beam energy of 3.1 GeV. For a given cascade, the photon energy can be selected over a wide range by varying the seed laser frequency and the field strength in the undulators. We present simulation results using the codes GENESIS and GINGER, as well as the results of analytical models which predict FEL performance. We discuss lattice considerations pertinent for harmonic cascade FELs, as well as sensitivity studies and requirements on the electron beam.

  10. Janus spectra: cascades without local isotropy

    NASA Astrophysics Data System (ADS)

    Liu, Chien-Chia; Cerbus, Rory; Chakraborty, Pinaki

    2016-11-01

    Two-dimensional turbulent flows host two disparate cascades: of enstrophy and of energy. The phenomenological theory of turbulence, which provides the theoretical underpinning of these cascades, assumes local isotropy. This assumption has been amply verified via computational, experimental and field data amassed to date. Local isotropy mandates that the streamwise (u) and transverse (v) velocity fluctuations partake in the same cascade; consequently, the attendant spectral exponents (αu and αv) of the turbulent energy spectra are the same, αu =αv . Here we report experiments in soap-film flows where αu corresponds to the energy cascade, but concurrently αv corresponds to the enstrophy cascade, as if two mutually independent turbulent fields of disparate dynamics were concurrently active within the flow. This species of turbulent energy spectra, which we term the Janus spectra, has never been observed or predicted theoretically. Remarkably, the tools of phenomenological theory can be invoked to elucidate this manifestly anisotropic flow. Okinawa Institute of Science and Technology.

  11. Cascade reactions catalyzed by metal organic frameworks.

    PubMed

    Dhakshinamoorthy, Amarajothi; Garcia, Hermenegildo

    2014-09-01

    Cascade or tandem reactions where two or more individual reactions are carried out in one pot constitute a clear example of process intensification, targeting the maximization of spatial and temporal productivity with mobilization of minimum resources. In the case of catalytic reactions, cascade processes require bi-/multifunctional catalysts that contain different classes of active sites. Herein, we show that the features and properties of metal-organic frameworks (MOFs) make these solids very appropriate materials for the development of catalysts for cascade reactions. Due to composition and structure, MOFs can incorporate different types of sites at the metal nodes, organic linkers, or at the empty internal pores, allowing the flexible design and synthesis of multifunctional catalysts. After some introductory sections on the relevance of cascade reactions from the point of view of competitiveness, sustainability, and environmental friendliness, the main part of the text provides a comprehensive review of the literature reporting the use of MOFs as heterogeneous catalysts for cascade reactions including those that combine in different ways acid/base, oxidation/reduction, and metal-organic centers. The final section summarizes the current state of the art, indicating that the development of a first commercial synthesis of a high-added-value fine chemical will be a crucial milestone in this area.

  12. Petrology and stratigraphy of Paleogene nonmarine sandstones, Cascade Range, Washington

    USGS Publications Warehouse

    Frizzell, Virgil A.

    1979-01-01

    The Cascade Range of Washington north of 47? latitude is composed of probable Paleozoic and Mesozoic metamorphic rocks and Mesozoic and Tertiary plutonic rocks. Several Paleogene nonmarine arkosic sandstone units fringe and in part occur within the complex crystalline core. The early to middle Eocene Chuckanut Formation is present on the west side of the crystalline core in the western foothills of the Cascades. The early to middle Eocene Swauk Formation partially encircles the Mt. Stuart massif of the central Cascades. In the western foothills of the Cascades, between the main body of Chuckanut Formation near Bellingham and the main outcrop area of the Swauk Formation south of Mt. Stuart, many smaller bodies of arkosic sandstone have variously been referred to either the Swauk or Chuckanut Formations. The early Eocene Manastash Formation occurs locally in an area south of the Yakima River. The middle to late Eocene Chumstick Formation is mostly confined to the Chiwaukum graben within the crystalline core and is separated from the Swauk Formation on the southwest by the Leavenworth Fault. The Oligocene Wenatchee Formation unconformably over lies the Chumstick Formation near Wenatchee. The middle to late Eocene Roslyn Formation crops out north of the Yakima River and is underlain by the Teanaway Basalt which separates the Roslyn from the older Swauk Formation. The middle Eocene to early Oligocene Naches Formation forms a north-trending body that crosses the Yakima River and is in fault contact with both the Swauk and Manastash Formations. The middle to late Eocene Puget Group underlies the Quaternary deposits of the Puget Lowland southeast of Seattle on the western flank of the Cascades. The various formations are all composed predominantly of fine- to medium-grained sandstones with lesser amounts of interbedded shale, conglomerate and coal. Compositionally, the units are predominantly either feldspathic or litho-feldspathic subquartzose sandstones. Volcanic rocks

  13. Bifurcations analysis of turbulent energy cascade

    SciTech Connect

    Divitiis, Nicola de

    2015-03-15

    This note studies the mechanism of turbulent energy cascade through an opportune bifurcations analysis of the Navier–Stokes equations, and furnishes explanations on the more significant characteristics of the turbulence. A statistical bifurcations property of the Navier–Stokes equations in fully developed turbulence is proposed, and a spatial representation of the bifurcations is presented, which is based on a proper definition of the fixed points of the velocity field. The analysis first shows that the local deformation can be much more rapid than the fluid state variables, then explains the mechanism of energy cascade through the aforementioned property of the bifurcations, and gives reasonable argumentation of the fact that the bifurcations cascade can be expressed in terms of length scales. Furthermore, the study analyzes the characteristic length scales at the transition through global properties of the bifurcations, and estimates the order of magnitude of the critical Taylor-scale Reynolds number and the number of bifurcations at the onset of turbulence.

  14. Sample Selection for Training Cascade Detectors

    PubMed Central

    Vállez, Noelia; Deniz, Oscar; Bueno, Gloria

    2015-01-01

    Automatic detection systems usually require large and representative training datasets in order to obtain good detection and false positive rates. Training datasets are such that the positive set has few samples and/or the negative set should represent anything except the object of interest. In this respect, the negative set typically contains orders of magnitude more images than the positive set. However, imbalanced training databases lead to biased classifiers. In this paper, we focus our attention on a negative sample selection method to properly balance the training data for cascade detectors. The method is based on the selection of the most informative false positive samples generated in one stage to feed the next stage. The results show that the proposed cascade detector with sample selection obtains on average better partial AUC and smaller standard deviation than the other compared cascade detectors. PMID:26197221

  15. Cascaded Microinverter PV System for Reduced Cost

    SciTech Connect

    Bellus, Daniel R.; Ely, Jeffrey A.

    2013-04-29

    In this project, a team led by Delphi will develop and demonstrate a novel cascaded photovoltaic (PV) inverter architecture using advanced components. This approach will reduce the cost and improve the performance of medium and large-sized PV systems. The overall project objective is to develop, build, and test a modular 11-level cascaded three-phase inverter building block for photovoltaic applications and to develop and analyze the associated commercialization plan. The system will be designed to utilize photovoltaic panels and will supply power to the electric grid at 208 VAC, 60 Hz 3-phase. With the proposed topology, three inverters, each with an embedded controller, will monitor and control each of the cascade sections, reducing costs associated with extra control boards. This report details the final disposition on this project.

  16. Seeded QED cascades in counterpropagating laser pulses

    NASA Astrophysics Data System (ADS)

    Grismayer, T.; Vranic, M.; Martins, J. L.; Fonseca, R. A.; Silva, L. O.

    2017-02-01

    The growth rates of seeded QED cascades in counterpropagating lasers are calculated with first-principles two- and three-dimensional QED-PIC (particle-in-cell) simulations. The dependence of the growth rate on the laser polarization and intensity is compared with analytical models that support the findings of the simulations. The models provide insight regarding the qualitative trend of the cascade growth when the intensity of the laser field is varied. A discussion about the cascade's threshold is included, based on the analytical and numerical results. These results show that relativistic pair plasmas and efficient conversion from laser photons to γ rays can be observed with the typical intensities planned to operate on future ultraintense laser facilities such as ELI or Vulcan.

  17. Seeded QED cascades in counterpropagating laser pulses.

    PubMed

    Grismayer, T; Vranic, M; Martins, J L; Fonseca, R A; Silva, L O

    2017-02-01

    The growth rates of seeded QED cascades in counterpropagating lasers are calculated with first-principles two- and three-dimensional QED-PIC (particle-in-cell) simulations. The dependence of the growth rate on the laser polarization and intensity is compared with analytical models that support the findings of the simulations. The models provide insight regarding the qualitative trend of the cascade growth when the intensity of the laser field is varied. A discussion about the cascade's threshold is included, based on the analytical and numerical results. These results show that relativistic pair plasmas and efficient conversion from laser photons to γ rays can be observed with the typical intensities planned to operate on future ultraintense laser facilities such as ELI or Vulcan.

  18. Cascade collapse in copper and nickel

    SciTech Connect

    Vetrano, J.S.; Robertson, I.M.; Averback, R.S. . Dept. of Materials Science and Engineering); Kirk, M.A. )

    1990-04-01

    In-situ TEM studies of the development of the damage structure produced by heavy ion irradiations have been performed in copper and nickel to investigate the possibility that melting occurs in local regions within displacement cascades. These experiments reveal that as the ion dose increases additional loops form from isolated displacement cascades, but more surprisingly some fo the pre-existing loops are annihilated, change position, size and/or Burgers vector. It was also found that the probability for loop formation and the defect image size are greater in copper than in nickel even at temperatures well below stage 3. It will be demonstrated that these observations provide supporting evidence, albeit indirect, that local melting occurs within the cascade core. These results will be compared to the molecular dynamic computer simulations of the damage created by low energy self-ions in copper and nickel. 15 refs., 4 figs.

  19. Cascade enzymatic reactions for efficient carbon sequestration.

    PubMed

    Xia, Shunxiang; Zhao, Xueyan; Frigo-Vaz, Benjamin; Zheng, Wenyun; Kim, Jungbae; Wang, Ping

    2015-04-01

    Thermochemical processes developed for carbon capture and storage (CCS) offer high carbon capture capacities, but are generally hampered by low energy efficiency. Reversible cascade enzyme reactions are examined in this work for energy-efficient carbon sequestration. By integrating the reactions of two key enzymes of RTCA cycle, isocitrate dehydrogenase and aconitase, we demonstrate that intensified carbon capture can be realized through such cascade enzymatic reactions. Experiments show that enhanced thermodynamic driving force for carbon conversion can be attained via pH control under ambient conditions, and that the cascade reactions have the potential to capture 0.5 mol carbon at pH 6 for each mole of substrate applied. Overall it manifests that the carbon capture capacity of biocatalytic reactions, in addition to be energy efficient, can also be ultimately intensified to approach those realized with chemical absorbents such as MEA.

  20. Tandem Mass Spectrum Identification via Cascaded Search

    PubMed Central

    2016-01-01

    Accurate assignment of peptide sequences to observed fragmentation spectra is hindered by the large number of hypotheses that must be considered for each observed spectrum. A high score assigned to a particular peptide–spectrum match (PSM) may not end up being statistically significant after multiple testing correction. Researchers can mitigate this problem by controlling the hypothesis space in various ways: considering only peptides resulting from enzymatic cleavages, ignoring possible post-translational modifications or single nucleotide variants, etc. However, these strategies sacrifice identifications of spectra generated by rarer types of peptides. In this work, we introduce a statistical testing framework, cascade search, that directly addresses this problem. The method requires that the user specify a priori a statistical confidence threshold as well as a series of peptide databases. For instance, such a cascade of databases could include fully tryptic, semitryptic, and nonenzymatic peptides or peptides with increasing numbers of modifications. Cascaded search then gradually expands the list of candidate peptides from more likely peptides toward rare peptides, sequestering at each stage any spectrum that is identified with a specified statistical confidence. We compare cascade search to a standard procedure that lumps all of the peptides into a single database, as well as to a previously described group FDR procedure that computes the FDR separately within each database. We demonstrate, using simulated and real data, that cascade search identifies more spectra at a fixed FDR threshold than with either the ungrouped or grouped approach. Cascade search thus provides a general method for maximizing the number of identified spectra in a statistically rigorous fashion. PMID:26084232

  1. Road guide to volcanic deposits of Mount St. Helens and vicinity, Washington

    SciTech Connect

    Doukas, M.P.

    1990-01-01

    Mount St. Helens, the most recently active and most intensively studied Cascade volcano, is located in southwestern Washington. The volcano is a superb outdoor laboratory for studying volcanic processes, deposits of observed events, and deposits whose origins are inferred by classic geologic techniques, including analogy to Recent deposits. This road log is a guide to Mount St. Helens Volcano, with emphasis on effects and deposits of the 1980 eruption.

  2. Robustness of network controllability in cascading failure

    NASA Astrophysics Data System (ADS)

    Chen, Shi-Ming; Xu, Yun-Fei; Nie, Sen

    2017-04-01

    It is demonstrated that controlling complex networks in practice needs more inputs than that predicted by the structural controllability framework. Besides, considering the networks usually faces to the external or internal failure, we define parameters to evaluate the control cost and the variation of controllability after cascades, exploring the effect of number of control inputs on the controllability for random networks and scale-free networks in the process of cascading failure. For different topological networks, the results show that the robustness of controllability will be stronger through allocating different control inputs and edge capacity.

  3. Cascade morphology transition in bcc metals.

    PubMed

    Setyawan, Wahyu; Selby, Aaron P; Juslin, Niklas; Stoller, Roger E; Wirth, Brian D; Kurtz, Richard J

    2015-06-10

    Energetic atom collisions in solids induce shockwaves with complex morphologies. In this paper, we establish the existence of a morphological transition in such cascades. The order parameter of the morphology is defined as the exponent, b, in the defect production curve as a function of cascade energy (N(F) ~ E(MD)(b)). Response of different bcc metals can be compared in a consistent energy domain when the energy is normalized by the transition energy, μ, between the high- and the low-energy regime. Using Cr, Fe, Mo and W data, an empirical formula of μ as a function of displacement threshold energy, E(d), is presented for bcc metals.

  4. GRAVITY STUDIES IN THE CASCADE RANGE.

    USGS Publications Warehouse

    Finn, Carol; Williams, David

    1983-01-01

    A compatible set of gravity data has been compiled for the entire Cascade Range. From this data set a series of interpretive color gravity maps have been prepared, including a free air anomaly map, Bouguer anomaly map at a principle, and an alternate reduction density, and filtered and derivative versions of the Bouguer anomaly map. The regional anomaly pattern and gradients outline the various geological provinces adjacent to the Cascade Range and delineate major structural elements in the range. The more local anomalies and gradients may delineate low density basin and caldera fill, faults, and shallow plutons. Refs.

  5. Optimal digital redesign of cascaded analogue controllers

    NASA Technical Reports Server (NTRS)

    Shieh, L. S.; Decrocq, B. B.; Zhang, J. L.

    1991-01-01

    This paper presents a new, optimal digital redesign technique for finding an optimal cascaded digital controller from the given continuous-time counterpart by minimizing a quadratic performance index. The control gains can be obtained by solving a set of Liapunov equations. The developed optimal cascaded digital controller enables the state and/or outputs of the digitally controlled closed-loop sampled-data system to optimally match those of the original continuous-time closed-loop system at any instant between sampling periods. The developed control law can be implemented using inexpensive and reliable digital electronics with a relatively long sampling period.

  6. Self-organized model of cascade spreading

    NASA Astrophysics Data System (ADS)

    Gualdi, S.; Medo, M.; Zhang, Y.-C.

    2011-01-01

    We study simultaneous price drops of real stocks and show that for high drop thresholds they follow a power-law distribution. To reproduce these collective downturns, we propose a minimal self-organized model of cascade spreading based on a probabilistic response of the system elements to stress conditions. This model is solvable using the theory of branching processes and the mean-field approximation. For a wide range of parameters, the system is in a critical state and displays a power-law cascade-size distribution similar to the empirically observed one. We further generalize the model to reproduce volatility clustering and other observed properties of real stocks.

  7. Cascading failure and robustness in metabolic networks.

    PubMed

    Smart, Ashley G; Amaral, Luis A N; Ottino, Julio M

    2008-09-09

    We investigate the relationship between structure and robustness in the metabolic networks of Escherichia coli, Methanosarcina barkeri, Staphylococcus aureus, and Saccharomyces cerevisiae, using a cascading failure model based on a topological flux balance criterion. We find that, compared to appropriate null models, the metabolic networks are exceptionally robust. Furthermore, by decomposing each network into rigid clusters and branched metabolites, we demonstrate that the enhanced robustness is related to the organization of branched metabolites, as rigid cluster formations in the metabolic networks appear to be consistent with null model behavior. Finally, we show that cascading in the metabolic networks can be described as a percolation process.

  8. Design of supercritical cascades with high solidity

    NASA Technical Reports Server (NTRS)

    Sanz, J. M.

    1982-01-01

    The method of complex characteristics of Garabedian and Korn was successfully used to design shockless cascades with solidities of up to one. A code was developed using this method and a new hodograph transformation of the flow onto an ellipse. This code allows the design of cascades with solidities of up to two and larger turning angles. The equations of potential flow are solved in a complex hodograph like domain by setting a characteristic initial value problem and integrating along suitable paths. The topology that the new mapping introduces permits a simpler construction of these paths of integration.

  9. Design of supercritical cascades with high solidity

    NASA Technical Reports Server (NTRS)

    Sanz, J. M.

    1982-01-01

    The method of complex characteristics of Garabedian and Korn has been successfully used to design shockless cascades with solidities of up to one. A new code has been developed using this method and a new hodograph transformation of the flow onto an ellipse. This new code allows the design of cascades with solidities of up to two and larger turning angles. The equations of potential flow are solved in a complex hodograph-like domain by setting a characteristic initial value problem and integrating along suitable paths. The topology that the new mapping introduces permits a simpler construction of these paths of integration.

  10. Microfluidics and microbial engineering.

    PubMed

    Kou, Songzi; Cheng, Danhui; Sun, Fei; Hsing, I-Ming

    2016-02-07

    The combination of microbial engineering and microfluidics is synergistic in nature. For example, microfluidics is benefiting from the outcome of microbial engineering and many reported point-of-care microfluidic devices employ engineered microbes as functional parts for the microsystems. In addition, microbial engineering is facilitated by various microfluidic techniques, due to their inherent strength in high-throughput screening and miniaturization. In this review article, we firstly examine the applications of engineered microbes for toxicity detection, biosensing, and motion generation in microfluidic platforms. Secondly, we look into how microfluidic technologies facilitate the upstream and downstream processes of microbial engineering, including DNA recombination, transformation, target microbe selection, mutant characterization, and microbial function analysis. Thirdly, we highlight an emerging concept in microbial engineering, namely, microbial consortium engineering, where the behavior of a multicultural microbial community rather than that of a single cell/species is delineated. Integrating the disciplines of microfluidics and microbial engineering opens up many new opportunities, for example in diagnostics, engineering of microbial motors, development of portable devices for genetics, high throughput characterization of genetic mutants, isolation and identification of rare/unculturable microbial species, single-cell analysis with high spatio-temporal resolution, and exploration of natural microbial communities.

  11. Nested Canalyzing, Unate Cascade, and Polynomial Functions.

    PubMed

    Jarrah, Abdul Salam; Raposa, Blessilda; Laubenbacher, Reinhard

    2007-09-15

    This paper focuses on the study of certain classes of Boolean functions that have appeared in several different contexts. Nested canalyzing functions have been studied recently in the context of Boolean network models of gene regulatory networks. In the same context, polynomial functions over finite fields have been used to develop network inference methods for gene regulatory networks. Finally, unate cascade functions have been studied in the design of logic circuits and binary decision diagrams. This paper shows that the class of nested canalyzing functions is equal to that of unate cascade functions. Furthermore, it provides a description of nested canalyzing functions as a certain type of Boolean polynomial function. Using the polynomial framework one can show that the class of nested canalyzing functions, or, equivalently, the class of unate cascade functions, forms an algebraic variety which makes their analysis amenable to the use of techniques from algebraic geometry and computational algebra. As a corollary of the functional equivalence derived here, a formula in the literature for the number of unate cascade functions provides such a formula for the number of nested canalyzing functions.

  12. Staged energy cascades for the LUX FEL

    SciTech Connect

    Penn, G.

    2004-07-27

    Designs and simulation studies for harmonic cascades, consisting of multiple stages of harmonic generation in free electron lasers (FELs), are presented as part of the LUX R&D project to design ultrafast, high photon energy light sources for basic science. Beam energies of 1.1, 2.1, and 3.1 GeV, corresponding to each pass through a recirculating linac, have independent designs for the harmonic cascade. Simulations were performed using the GENESIS FEL code, to obtain predictions for the performance of these cascades over a wide range of photon energies in terms of the peak power and laser profile. The output laser beam consists of photon energies of up to 1 keV, with durations of the order of 200 fs or shorter. The contribution of shot noise to the laser output is minimal, however fluctuations in the laser and electron beam properties can lead to variations in the FEL output. The sensitivity of the cascade to electron beam properties and misalignments is studied, taking advantage of the fact that GENESIS is a fully 3-dimensional code.

  13. Modeling and simulation of cascading contingencies

    NASA Astrophysics Data System (ADS)

    Zhang, Jianfeng

    This dissertation proposes a new approach to model and study cascading contingencies in large power systems. The most important contribution of the work involves the development and validation of a heuristic analytic model to assess the likelihood of cascading contingencies, and the development and validation of a uniform search strategy. We model the probability of cascading contingencies as a function of power flow and power flow changes. Utilizing logistic regression, the proposed model is calibrated using real industry data. This dissertation analyzes random search strategies for Monte Carlo simulations and proposes a new uniform search strategy based on the Metropolis-Hastings Algorithm. The proposed search strategy is capable of selecting the most significant cascading contingencies, and it is capable of constructing an unbiased estimator to provide a measure of system security. This dissertation makes it possible to reasonably quantify system security and justify security operations when economic concerns conflict with reliability concerns in the new competitive power market environment. It can also provide guidance to system operators about actions that may be taken to reduce the risk of major system blackouts. Various applications can be developed to take advantage of the quantitative security measures provided in this dissertation.

  14. Geothermal research, Oregon Cascades: Final technical report

    SciTech Connect

    Priest, G.R.; Black, G.L.

    1988-10-27

    Previous USDOE-funded geothermal studies have produced an extensive temperature gradient and heat flow data base for the State of Oregon. One of the important features identified as a result of these studies is a rapid transition from heat flow values on the order of 40 mW/m/sup 2/ in the Willamette Valley and Western Cascades to values of greater than or equal to100 mW/m/sup 2/ in the High Cascades and the eastern portion of the Western Cascades. These data indicate that the Cascade Range in Oregon has potential as a major geothermal province and stimulated much of the later work completed by government agencies and private industry. Additional data generated as a result of this grant and published in DOGAMI Open-File Report 0-86-2 further define the location and magnitude of this transition zone. In addition, abundant data collected from the vicinity of Breitenbush and Austin Hot Springs have permitted the formulation of relatively detailed models of these hydrothermal systems. These models are published in DOGAMI Open-File Report 0-88-5. Task 1.2 of the Deliverables section of Amendment M001 is fulfilled by DOGAMI publication GMS-48, Geologic map of the McKenzie Bridge quadrangle, Lane County, Oregon. This map was printed in October, 1988, and is part of the final submission to USDOE. 8 refs.

  15. A High Frequency Model of Cascade Noise

    NASA Technical Reports Server (NTRS)

    Envia, Edmane

    1998-01-01

    Closed form asymptotic expressions for computing high frequency noise generated by an annular cascade in an infinite duct containing a uniform flow are presented. There are two new elements in this work. First, the annular duct mode representation does not rely on the often-used Bessel function expansion resulting in simpler expressions for both the radial eigenvalues and eigenfunctions of the duct. In particular, the new representation provides an explicit approximate formula for the radial eigenvalues obviating the need for solutions of the transcendental annular duct eigenvalue equation. Also, the radial eigenfunctions are represented in terms of exponentials eliminating the numerical problems associated with generating the Bessel functions on a computer. The second new element is the construction of an unsteady response model for an annular cascade. The new construction satisfies the boundary conditions on both the cascade and duct walls simultaneously adding a new level of realism to the noise calculations. Preliminary results which demonstrate the effectiveness of the new elements are presented. A discussion of the utility of the asymptotic formulas for calculating cascade discrete tone as well as broadband noise is also included.

  16. Cascade enzyme-linked immunosorbent assay (CELISA).

    PubMed

    Lee, Young-mi; Jeong, Yujin; Kang, Hyo Jin; Chung, Sang J; Chung, Bong Hyun

    2009-10-15

    Immunoassays are representative biochemical detection methods. Among them, sandwich-type immunoassays, typified by sandwich ELISA, have used in disease diagnosis or biochemical detection with high target selectivity. Horseradish peroxidase and alkaline phosphatase have been typically used for signal amplification in ELISA. Recently developed sandwich-type immunoassays such as biobarcode immunoassays, immuno-PCR, and immuno-RCA have improved sensitivity by changing mainly the signal amplification method. To develop a novel amplification method in ELISA, an enzyme-cascading system was incorporated into an ELISA, and the new assay is termed a cascading enzyme-linked immunosorbent assay (CELISA). This CELISA includes a trypsinogen-enterokinase combination as the cascading enzyme system, and was used to detect alpha-fetoprotein (AFP), which is a liver cancer marker, and prostate-specific antigen (PSA). Using a colorimetric reagent for signal generation, CELISA had 0.1-10pM limits-of-detection for AFP and PSA in whole human serum and assay buffers, depending on the platform, well plate, or microbead type used. This study represents the first example that incorporated an enzyme cascading step in an ELISA system, resulting in successful signal amplification with sensitive detection of pathogenic antigens in serum.

  17. Catastrophic cascade of failures in interdependent networks.

    PubMed

    Buldyrev, Sergey V; Parshani, Roni; Paul, Gerald; Stanley, H Eugene; Havlin, Shlomo

    2010-04-15

    Complex networks have been studied intensively for a decade, but research still focuses on the limited case of a single, non-interacting network. Modern systems are coupled together and therefore should be modelled as interdependent networks. A fundamental property of interdependent networks is that failure of nodes in one network may lead to failure of dependent nodes in other networks. This may happen recursively and can lead to a cascade of failures. In fact, a failure of a very small fraction of nodes in one network may lead to the complete fragmentation of a system of several interdependent networks. A dramatic real-world example of a cascade of failures ('concurrent malfunction') is the electrical blackout that affected much of Italy on 28 September 2003: the shutdown of power stations directly led to the failure of nodes in the Internet communication network, which in turn caused further breakdown of power stations. Here we develop a framework for understanding the robustness of interacting networks subject to such cascading failures. We present exact analytical solutions for the critical fraction of nodes that, on removal, will lead to a failure cascade and to a complete fragmentation of two interdependent networks. Surprisingly, a broader degree distribution increases the vulnerability of interdependent networks to random failure, which is opposite to how a single network behaves. Our findings highlight the need to consider interdependent network properties in designing robust networks.

  18. Electrically Tunable Terahertz Quantum-Cascade Lasers

    NASA Technical Reports Server (NTRS)

    Gunapala, Sarath; Soidel, Alexander; Mansour, Kamjou

    2006-01-01

    Improved quantum-cascade lasers (QCLs) are being developed as electrically tunable sources of radiation in the far infrared spectral region, especially in the frequency range of 2 to 5 THz. The structures of QCLs and the processes used to fabricate them have much in common with those of multiple- quantum-well infrared photodetectors.

  19. Cascaded frequency doublers for broadband laser radiation

    SciTech Connect

    Andreev, N F; Vlasova, K V; Davydov, V S; Kulikov, S M; Makarov, A I; Sukharev, Stanislav A; Freidman, Gennadii I; Shubin, S V

    2012-10-31

    A new scheme of a cascaded converter of the first harmonic of broadband cw laser radiation into the second harmonic (SH) with compensation for the group walk-off in cascades is proposed and investigated. The conditions under which high conversion coefficients of broadband ({approx}33 cm{sup -1}) single-mode fibre laser radiation with low peak power ({approx}300 W) into the SH are determined for frequency doublers based on the most promising LBO crystal. Conversion of cw radiation with an average power of 300 W and efficiency {eta} = 4.5 % into the SH is obtained in a single LBO crystal. Effect of coherent addition of SH radiation excited in different cascades is demonstrated for two- and three-stage schemes. The expected conversion efficiencies, calculated disregarding loss but taking into account real aberrations of elements, are 18 % and 38 %, respectively. The effect of pumping depletion begins to manifest itself in the third cascade of a three-stage converter; it may reduce the latter value to {approx}30 %. (nonlinear optical phenomena)

  20. Forecasting Social Unrest Using Activity Cascades

    PubMed Central

    Cadena, Jose; Korkmaz, Gizem; Kuhlman, Chris J.; Marathe, Achla; Ramakrishnan, Naren; Vullikanti, Anil

    2015-01-01

    Social unrest is endemic in many societies, and recent news has drawn attention to happenings in Latin America, the Middle East, and Eastern Europe. Civilian populations mobilize, sometimes spontaneously and sometimes in an organized manner, to raise awareness of key issues or to demand changes in governing or other organizational structures. It is of key interest to social scientists and policy makers to forecast civil unrest using indicators observed on media such as Twitter, news, and blogs. We present an event forecasting model using a notion of activity cascades in Twitter (proposed by Gonzalez-Bailon et al., 2011) to predict the occurrence of protests in three countries of Latin America: Brazil, Mexico, and Venezuela. The basic assumption is that the emergence of a suitably detected activity cascade is a precursor or a surrogate to a real protest event that will happen “on the ground.” Our model supports the theoretical characterization of large cascades using spectral properties and uses properties of detected cascades to forecast events. Experimental results on many datasets, including the recent June 2013 protests in Brazil, demonstrate the effectiveness of our approach. PMID:26091012

  1. The Attention Cascade Model and Attentional Blink

    ERIC Educational Resources Information Center

    Shih, Shui-I

    2008-01-01

    An attention cascade model is proposed to account for attentional blinks in rapid serial visual presentation (RSVP) of stimuli. Data were collected using single characters in a single RSVP stream at 10 Hz [Shih, S., & Reeves, A. (2007). "Attentional capture in rapid serial visual presentation." "Spatial Vision", 20(4), 301-315], and single words,…

  2. OVERALL VIEW OF CASCADE CANAL COMPANY CRIB DAM, LOOKING UPSTREAM ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    OVERALL VIEW OF CASCADE CANAL COMPANY CRIB DAM, LOOKING UPSTREAM FROM DIRECTION OF KACHESS DAM. VIEW TO NORTH - Kachess Dam, 1904 Cascade Canal Company Crib Dam, Kachess River, 1.5 miles north of Interstate 90, Easton, Kittitas County, WA

  3. Experimental determination of unsteady blade element aerodynamics in cascades. Volume 1: Torsion mode cascade

    NASA Technical Reports Server (NTRS)

    Riffel, R. E.; Rothrock, M. D.

    1980-01-01

    A two dimensional cascade of harmonically oscillating airfoils was designed to model a near tip section from a rotor which was known to have experienced supersonic torsional flutter. This five bladed cascade had a solidity of 1.17 and a setting angle of 1.07 rad. Graphite epoxy airfoils were fabricated to achieve the realistically high reduced frequency level of 0.44. The cascade was tested over a range of static pressure ratios approximating the blade element operating conditions of the rotor along a constant speed line which penetrated the flutter boundary. The time-steady and time-unsteady flow field surrounding the center cascade airfoil were investigated. The effects of reduced solidity and decreased setting angle on the flow field were also evaluated.

  4. Component criticality in failure cascade processes of network systems.

    PubMed

    Zio, Enrico; Sansavini, Giovanni

    2011-08-01

    In this work, specific indicators are used to characterize the criticality of components in a network system with respect to their contribution to failure cascade processes. A realistic-size network is considered as reference case study. Three different models of cascading failures are analyzed, differing both on the failure load distribution logic and on the cascade triggering event. The criticality indicators are compared to classical measures of topological centrality to identify the one most characteristic of the cascade processes considered.

  5. DETAILED COMPARISON BETWEEN PARTON CASCADE AND HADRONIC CASCADE AT SPS AND RHIC.

    SciTech Connect

    NARA,Y.

    1998-10-23

    The authors study the importance of the partonic phase produced in relativistic heavy ion collision by comparing the parton cascade model and the hadronic cascade model. Hadron yield, baryon stopping and transverse momentum distribution are calculated with JAM and discussions are given comparing with VNI. Both of these models give good description of experimental data. They also discuss the strangeness production mechanism and the directed transverse flow.

  6. Geochemical Database for Igneous Rocks of the Ancestral Cascades Arc - Southern Segment, California and Nevada

    USGS Publications Warehouse

    du Bray, Edward A.; John, David A.; Putirka, Keith; Cousens, Brian L.

    2009-01-01

    Volcanic rocks that form the southern segment of the Cascades magmatic arc are an important manifestation of Cenozoic subduction and associated magmatism in western North America. Until recently, these rocks had been little studied and no systematic compilation of existing composition data had been assembled. This report is a compilation of all available chemical data for igneous rocks that constitute the southern segment of the ancestral Cascades magmatic arc and complement a previously completed companion compilation that pertains to rocks that constitute the northern segment of the arc. Data for more than 2,000 samples from a diversity of sources were identified and incorporated in the database. The association between these igneous rocks and spatially and temporally associated mineral deposits is well established and suggests a probable genetic relationship. The ultimate goal of the related research is an evaluation of the time-space-compositional evolution of magmatism associated with the southern Cascades arc segment and identification of genetic associations between magmatism and mineral deposits in this region.

  7. Multiperiod quantum-cascade nanoheterostructures: Epitaxy and diagnostics

    SciTech Connect

    Egorov, A. Yu. Brunkov, P. N.; Nikitina, E. V.; Pirogov, E. V.; Sobolev, M. S.; Lazarenko, A. A.; Baidakova, M. V.; Kirilenko, D. A.; Konnikov, S. G.

    2014-12-15

    Advances in the production technology of multiperiod nanoheterostructures of quantum-cascade lasers with 60 cascades by molecular-beam epitaxy (MBE) on an industrial multiple-substrate MBE machine are discussed. The results obtained in studying the nanoheterostructures of quantum-cascade lasers by transmission electron microscopy, high-resolution X-ray diffraction analysis, and photoluminescence mapping are presented.

  8. Applications of quantum cascade lasers in plasma diagnostics: a review

    NASA Astrophysics Data System (ADS)

    Röpcke, J.; Davies, P. B.; Lang, N.; Rousseau, A.; Welzel, S.

    2012-10-01

    Over the past few years mid-infrared absorption spectroscopy based on quantum cascade lasers operating over the region from 3 to 12 µm and called quantum cascade laser absorption spectroscopy or QCLAS has progressed considerably as a powerful diagnostic technique for in situ studies of the fundamental physics and chemistry of molecular plasmas. The increasing interest in processing plasmas containing hydrocarbons, fluorocarbons, nitrogen oxides and organo-silicon compounds has led to further applications of QCLAS because most of these compounds and their decomposition products are infrared active. QCLAS provides a means of determining the absolute concentrations of the ground states of stable and transient molecular species at time resolutions below a microsecond, which is of particular importance for the investigation of reaction kinetics and dynamics. Information about gas temperature and population densities can also be derived from QCLAS measurements. Since plasmas with molecular feed gases are used in many applications such as thin film deposition, semiconductor processing, surface activation and cleaning, and materials and waste treatment, this has stimulated the adaptation of QCLAS techniques to industrial requirements including the development of new diagnostic equipment. The recent availability of external cavity (EC) QCLs offers a further new option for multi-component detection. The aim of this paper is fourfold: (i) to briefly review spectroscopic issues arising from applying pulsed QCLs, (ii) to report on recent achievements in our understanding of molecular phenomena in plasmas and at surfaces, (iii) to describe the current status of industrial process monitoring in the mid-infrared and (iv) to discuss the potential of advanced instrumentation based on EC-QCLs for plasma diagnostics.

  9. MFC-cascade stacks maximise COD reduction and avoid voltage reversal under adverse conditions.

    PubMed

    Ledezma, Pablo; Greenman, John; Ieropoulos, Ioannis

    2013-04-01

    Six continuous-flow Microbial Fuel Cells (MFCs) configured as a vertical cascade and tested under different electrical connections are presented. When in parallel, stable operation and higher power and current densities than individual MFCs were observed, despite substrate imbalances. The cascading dynamic allowed for a cumulative COD reduction of >95% in approximately 5.7h, equivalent to 7.97 kg COD m(-3) d(-1). Under a series configuration, the stack exhibited considerable losses until correct fluidic/electrical insulation of the units was applied, upon which the stack also exhibited superior performance. In both electrical configurations, the 6 MFC system was systematically starved for up to 15 d, with no significant performance degradation. The results from the 14-month trials, demonstrate that cascade-stacking of small units can result in enhanced electricity production (vs single large units) and treatment rates without using expensive catalysts. It is also demonstrated that substrate imbalances and starvation do not necessarily result in cell-voltage reversal.

  10. Microbial limitation in a changing world: A stoichiometric approach for predicting microbial resource limitation and fluxes

    NASA Astrophysics Data System (ADS)

    Midgley, M.; Phillips, R.

    2014-12-01

    Microbes mediate fluxes of carbon (C), nitrogen (N), and phosphorus (P) in soils depending on ratios of available C, N, and P relative to microbial demand. Hence, characterizing microbial C and nutrient limitation in soils is critical for predicting how ecosystems will respond to human alterations of climate and nutrient availability. Here, we take a stoichiometric approach to assessing microbial C, N, and P limitation by using threshold element ratios (TERs). TERs enable shifting resource limitation to be assessed by matching C, N and P ratios from microbial biomass, extracellular enzyme activities, and soil nutrient concentrations. We assessed microbial nutrient limitation in temperate forests dominated by trees that associate with one of two mycorrhizal symbionts: arbsucular mycorrhizal (AM) or ectomycorrhizal (ECM) fungi. We found that both ECM and AM microbial communities were co-limited by C and N, supporting conventional wisdom that microbes are C-limited and temperate forests are N-limited. However, AM microbial communities were relatively more C-limited than ECM communities (P=0.001). In response to chronic field N fertilization, both AM and ECM communities became relatively more P-limited (P=0.011), but they remained N- and C-limited overall. Thus, realistic levels of N deposition may not dampen microbial N limitation. Reflecting differences in relative limitation, N mineralization rates were higher in AM soils than in ECM soils (P=0.004) while C mineralization rates were higher in ECM soils than in AM soils (P=0.023). There were no significant differences in P flux between AM and ECM soils or detectable mineralization responses to N addition, indicating that mineralization rates are closely tied to C and nutrient limitation. Overall, we found that 1) microbial resource limitation can be detected without resource addition; and 2) TERs and ratios of labile resources are viable tools for predicting mineralization responses to resource additions.

  11. Slab melting and magma formation beneath the southern Cascade arc

    NASA Astrophysics Data System (ADS)

    Walowski, K. J.; Wallace, P. J.; Clynne, M. A.; Rasmussen, D. J.; Weis, D.

    2016-07-01

    The processes that drive magma formation beneath the Cascade arc and other warm-slab subduction zones have been debated because young oceanic crust is predicted to largely dehydrate beneath the forearc during subduction. In addition, geochemical variability along strike in the Cascades has led to contrasting interpretations about the role of volatiles in magma generation. Here, we focus on the Lassen segment of the Cascade arc, where previous work has demonstrated across-arc geochemical variations related to subduction enrichment, and H-isotope data suggest that H2O in basaltic magmas is derived from the final breakdown of chlorite in the mantle portion of the slab. We use naturally glassy, olivine-hosted melt inclusions (MI) from the tephra deposits of eight primitive (MgO > 7 wt%) basaltic cinder cones to quantify the pre-eruptive volatile contents of mantle-derived melts in this region. The melt inclusions have B concentrations and isotope ratios that are similar to mid-ocean ridge basalt (MORB), suggesting extensive dehydration of the downgoing plate prior to reaching sub-arc depths and little input of slab-derived B into the mantle wedge. However, correlations of volatile and trace element ratios (H2O/Ce, Cl/Nb, Sr/Nd) in the melt inclusions demonstrate that geochemical variability is the result of variable addition of a hydrous subduction component to the mantle wedge. Furthermore, correlations between subduction component tracers and radiogenic isotope ratios show that the subduction component has less radiogenic Sr and Pb than the Lassen sub-arc mantle, which can be explained by melting of subducted Gorda MORB beneath the arc. Agreement between pMELTS melting models and melt inclusion volatile, major, and trace element data suggests that hydrous slab melt addition to the mantle wedge can produce the range in primitive compositions erupted in the Lassen region. Our results provide further evidence that chlorite-derived fluids from the mantle portion of the

  12. Microbial communities associated with wet flue gas desulfurization systems

    PubMed Central

    Brown, Bryan P.; Brown, Shannon R.; Senko, John M.

    2012-01-01

    Flue gas desulfurization (FGD) systems are employed to remove SOx gasses that are produced by the combustion of coal for electric power generation, and consequently limit acid rain associated with these activities. Wet FGDs represent a physicochemically extreme environment due to the high operating temperatures and total dissolved solids (TDS) of fluids in the interior of the FGD units. Despite the potential importance of microbial activities in the performance and operation of FGD systems, the microbial communities associated with them have not been evaluated. Microbial communities associated with distinct process points of FGD systems at several coal-fired electricity generation facilities were evaluated using culture-dependent and -independent approaches. Due to the high solute concentrations and temperatures in the FGD absorber units, culturable halothermophilic/tolerant bacteria were more abundant in samples collected from within the absorber units than in samples collected from the makeup waters that are used to replenish fluids inside the absorber units. Evaluation of bacterial 16S rRNA genes recovered from scale deposits on the walls of absorber units revealed that the microbial communities associated with these deposits are primarily composed of thermophilic bacterial lineages. These findings suggest that unique microbial communities develop in FGD systems in response to physicochemical characteristics of the different process points within the systems. The activities of the thermophilic microbial communities that develop within scale deposits could play a role in the corrosion of steel structures in FGD systems. PMID:23226147

  13. Microbial communities associated with wet flue gas desulfurization systems.

    PubMed

    Brown, Bryan P; Brown, Shannon R; Senko, John M

    2012-01-01

    Flue gas desulfurization (FGD) systems are employed to remove SO(x) gasses that are produced by the combustion of coal for electric power generation, and consequently limit acid rain associated with these activities. Wet FGDs represent a physicochemically extreme environment due to the high operating temperatures and total dissolved solids (TDS) of fluids in the interior of the FGD units. Despite the potential importance of microbial activities in the performance and operation of FGD systems, the microbial communities associated with them have not been evaluated. Microbial communities associated with distinct process points of FGD systems at several coal-fired electricity generation facilities were evaluated using culture-dependent and -independent approaches. Due to the high solute concentrations and temperatures in the FGD absorber units, culturable halothermophilic/tolerant bacteria were more abundant in samples collected from within the absorber units than in samples collected from the makeup waters that are used to replenish fluids inside the absorber units. Evaluation of bacterial 16S rRNA genes recovered from scale deposits on the walls of absorber units revealed that the microbial communities associated with these deposits are primarily composed of thermophilic bacterial lineages. These findings suggest that unique microbial communities develop in FGD systems in response to physicochemical characteristics of the different process points within the systems. The activities of the thermophilic microbial communities that develop within scale deposits could play a role in the corrosion of steel structures in FGD systems.

  14. APP processing and the APP-KPI domain involvement in the amyloid cascade.

    PubMed

    Menéndez-González, M; Pérez-Pinera, P; Martínez-Rivera, M; Calatayud, M T; Blázquez Menes, B

    2005-01-01

    Alternative APP mRNA splicing can generate isoforms of APP containing a Kunitz protease inhibitor (KPI) domain. KPI is one of the main serine protease inhibitors. Protein and mRNA KPI(+)APP levels are elevated in Alzheimer's disease (AD) brain and are associated with increased amyloid beta deposition. In the last years increasing evidence on multiple points in the amyloid cascade where KPI(+)APP is involved has been accumulated, admitting an outstanding position in the pathogenesis of AD to the KPI domain. This review focuses on the APP processing, the molecular activity of KPI and its physiological and pathological roles and the KPI involvement in the amyloid cascade through the nerve growth factor, the lipoprotein receptor-related protein, the tumor necrosis factor-alpha converting enzyme and the Notch1 protein.

  15. Cascading failures in bi-partite graphs: model for systemic risk propagation.

    PubMed

    Huang, Xuqing; Vodenska, Irena; Havlin, Shlomo; Stanley, H Eugene

    2013-01-01

    As economic entities become increasingly interconnected, a shock in a financial network can provoke significant cascading failures throughout the system. To study the systemic risk of financial systems, we create a bi-partite banking network model composed of banks and bank assets and propose a cascading failure model to describe the risk propagation process during crises. We empirically test the model with 2007 US commercial banks balance sheet data and compare the model prediction of the failed banks with the real failed banks after 2007. We find that our model efficiently identifies a significant portion of the actual failed banks reported by Federal Deposit Insurance Corporation. The results suggest that this model could be useful for systemic risk stress testing for financial systems. The model also identifies that commercial rather than residential real estate assets are major culprits for the failure of over 350 US commercial banks during 2008-2011.

  16. Cascading Failures in Bi-partite Graphs: Model for Systemic Risk Propagation

    PubMed Central

    Huang, Xuqing; Vodenska, Irena; Havlin, Shlomo; Stanley, H. Eugene

    2013-01-01

    As economic entities become increasingly interconnected, a shock in a financial network can provoke significant cascading failures throughout the system. To study the systemic risk of financial systems, we create a bi-partite banking network model composed of banks and bank assets and propose a cascading failure model to describe the risk propagation process during crises. We empirically test the model with 2007 US commercial banks balance sheet data and compare the model prediction of the failed banks with the real failed banks after 2007. We find that our model efficiently identifies a significant portion of the actual failed banks reported by Federal Deposit Insurance Corporation. The results suggest that this model could be useful for systemic risk stress testing for financial systems. The model also identifies that commercial rather than residential real estate assets are major culprits for the failure of over 350 US commercial banks during 2008–2011. PMID:23386974

  17. Succession in a microbial mat community - A Gaian perspective

    NASA Technical Reports Server (NTRS)

    Stolz, J. F.

    1984-01-01

    The contribution of prokaryotes to Gaian control systems is discussed. The survival of the Microcoleus-dominated stratified microbial community at Laguna Figueroa, after heavy rains flooded the evaporite flat with up to 3 m of water and deposited 5-10 cm of allocthonous sediment, demonstrates the resiliency of these communities to short-term perturbations while the microbial fossil record attests to their persistence over geologic time. It is shown that the great diversity of microbial species and their short generation time make them uniquely suited for Gaian mechanisms.

  18. Analytical model for electromagnetic cascades in rotating electric field

    SciTech Connect

    Nerush, E. N.; Bashmakov, V. F.; Kostyukov, I. Yu.

    2011-08-15

    Electromagnetic cascades attract a lot of attention as an important quantum electrodynamics effect that will reveal itself in various electromagnetic field configurations at ultrahigh intensities. We study cascade dynamics in rotating electric field analytically and numerically. The kinetic equations for the electron-positron plasma and gamma-quanta are formulated. The scaling laws are derived and analyzed. For the cascades arising far above the threshold the dependence of the cascade parameters on the field frequency is derived. The spectra of high-energy cascade particles are calculated. The analytical results are verified by numerical simulations.

  19. Microbial Diversity of Impact-Generated Habitats.

    PubMed

    Pontefract, Alexandra; Osinski, Gordon R; Cockell, Charles S; Southam, Gordon; McCausland, Phil J A; Umoh, Joseph; Holdsworth, David W

    2016-10-01

    Impact-generated lithologies have recently been identified as viable and important microbial habitats, especially within cold and arid regions such as the polar deserts on Earth. These unique habitats provide protection from environmental stressors, such as freeze-thaw events, desiccation, and UV radiation, and act to trap aerially deposited detritus within the fissures and pore spaces, providing necessary nutrients for endoliths. This study provides the first culture-independent analysis of the microbial community structure within impact-generated lithologies in a Mars analog environment, involving the analysis of 44,534 16S rRNA sequences from an assemblage of 21 rock samples that comprises three shock metamorphism categories. We find that species diversity increases (H = 2.4-4.6) with exposure to higher shock pressures, which leads to the development of three distinct populations. In each population, Actinobacteria were the most abundant (41%, 65%, and 59%), and the dominant phototrophic taxa came from the Chloroflexi. Calculated porosity (a function of shock metamorphism) for these samples correlates (R(2) = 0.62) with inverse Simpson indices, accounting for overlap in populations in the higher shock levels. The results of our study show that microbial diversity is tied to the amount of porosity in the target substrate (as a function of shock metamorphism), resulting in the formation of distinct microbial populations. Key Words: Microbial diversity-Endoliths-Impact melt-rocks-Mars-Astrobiology. Astrobiology 16, 775-786.

  20. Microbial Properties Database Editor Tutorial

    EPA Science Inventory

    A Microbial Properties Database Editor (MPDBE) has been developed to help consolidate microbial-relevant data to populate a microbial database and support a database editor by which an authorized user can modify physico-microbial properties related to microbial indicators and pat...

  1. Why Microbial Communities?

    ScienceCinema

    Fredrickson, Jim (PNNL)

    2016-07-12

    The Microbial Communities Initiative is a 5-year investment by Pacific Northwest National Laboratory that integrates biological/ecological experimentation, analytical chemistry, and simulation modeling. The objective is to create transforming technologies, elucidate mechanistic forces, and develop theoretical frameworks for the analysis and predictive understanding of microbial communities. Dr. Fredrickson introduces the symposium by defining microbial communities and describing their scientific relevance as they relate to solving problems in energy, climate, and sustainability.

  2. Microbial Mechanisms Enhancing Soil C Storage

    SciTech Connect

    Zak, Donald

    2015-09-24

    Human activity has globally increased the amount of nitrogen (N) entering ecosystems, which could foster higher rates of C sequestration in the N-limited forests of the Northern Hemisphere. Presently, these ecosystems are a large global sink for atmospheric CO2, the magnitude of which could be influenced by the input of human-derived N from the atmosphere. Nevertheless, empirical studies and simulation models suggest that anthropogenic N deposition could have either an important or inconsequential effect on C storage in forests of the Northern Hemisphere, a set of observations that continues to fuel scientific discourse. Although a relatively simple set of physiological processes control the C balance of terrestrial ecosystems, we still fail to understand how these processes directly and indirectly respond to greater N availability in the environment. The uptake of anthropogenic N by N-limited forest trees and a subsequent enhancement of net primary productivity have been the primary mechanisms thought to increase ecosystem C storage in Northern Hemisphere forests. However, there are reasons to expect that anthropogenic N deposition could slow microbial activity in soil, decrease litter decay, and increase soil C storage. Fungi dominate the decay of plant detritus in forests and, under laboratory conditions, high inorganic N concentrations can repress the transcription of genes coding for enzymes which depolymerize lignin in plant detritus; this observation presents the possibility that anthropogenic N deposition could elicit a similar effect under field conditions. In our 18-yr-long field experiment, we have been able to document that simulated N deposition, at a rate expected in the near future, resulted in a significant decline in cellulolytic and lignolytic microbial activity, slowed plant litter decay, and increased soil C storage (+10%); this response is not portrayed in any biogeochemical model simulating the effect of atmospheric N deposition on ecosystem C

  3. Gamma ray pulsars. [electron-photon cascades

    NASA Technical Reports Server (NTRS)

    Oegelman, H.; Ayasli, S.; Hacinliyan, A.

    1977-01-01

    Data from the SAS-2 high-energy gamma-ray experiment reveal the existence of four pulsars emitting photons above 35 MeV. An attempt is made to explain the gamma-ray emission from these pulsars in terms of an electron-photon cascade that develops in the magnetosphere of the pulsar. Although there is very little material above the surface of the pulsar, the very intense magnetic fields (10 to the 12th power gauss) correspond to many radiation lengths which cause electrons to emit photons by magnetic bremsstrahlung and which cause these photons to pair-produce. The cascade develops until the mean photon energy drops below the pair-production threshold which is in the gamma-ray range; at this stage, the photons break out from the source.

  4. Cascade morphology transition in bcc metals

    DOE PAGES

    Setyawan, Wahyu; Selby, Aaron P.; Juslin, Niklas; ...

    2015-01-01

    Energetic atom collisions in solids induce shockwaves with complex morphologies. In this paper, we establish the existence of a morphological transition in such cascades. The order parameter of the morphology is defined as the exponent, b, in the defect production curve as a function of cascade energy (N-F similar to E-MD(b)). Response of different bcc metals can be compared in a consistent energy domain when the energy is normalized by the transition energy, mu, between the high-and the low-energy regime. Using Cr, Fe, Mo and W data, an empirical formula of mu as a function of displacement threshold energy, E-d,more » is presented for bcc metals.« less

  5. Cascade morphology transition in bcc metals

    SciTech Connect

    Setyawan, Wahyu; Selby, A.; Juslin, Niklas; Stoller, Roger E.; Wirth, Brian D.; Kurtz, Richard J.

    2015-06-10

    Energetic atom collisions in solids induce shockwaves with complex morphologies. In this paper, we establish the existence of a morphological transition in such cascades. The order parameter of the morphology is defined as the exponent, $b$, in the defect production curve as a function of cascade energy ($N_F$$ \\sim$$E_{MD}^b$). Response of different bcc metals can be compared in a consistent energy domain when the energy is normalized by the transition energy, $\\mu$, between the high- and the low-energy regime. Using Cr, Fe, Mo and W data, an empirical formula of $\\mu$ as a function of displacement threshold energy, $E_d$, is presented for bcc metals.

  6. Cascade morphology transition in bcc metals

    SciTech Connect

    Setyawan, Wahyu; Selby, Aaron P.; Juslin, Niklas; Stoller, Roger E.; Wirth, Brian D.; Kurtz, Richard J.

    2015-01-01

    Energetic atom collisions in solids induce shockwaves with complex morphologies. In this paper, we establish the existence of a morphological transition in such cascades. The order parameter of the morphology is defined as the exponent, b, in the defect production curve as a function of cascade energy (N-F similar to E-MD(b)). Response of different bcc metals can be compared in a consistent energy domain when the energy is normalized by the transition energy, mu, between the high-and the low-energy regime. Using Cr, Fe, Mo and W data, an empirical formula of mu as a function of displacement threshold energy, E-d, is presented for bcc metals.

  7. Cascade models of synaptically stored memories.

    PubMed

    Fusi, Stefano; Drew, Patrick J; Abbott, L F

    2005-02-17

    Storing memories of ongoing, everyday experiences requires a high degree of plasticity, but retaining these memories demands protection against changes induced by further activity and experience. Models in which memories are stored through switch-like transitions in synaptic efficacy are good at storing but bad at retaining memories if these transitions are likely, and they are poor at storage but good at retention if they are unlikely. We construct and study a model in which each synapse has a cascade of states with different levels of plasticity, connected by metaplastic transitions. This cascade model combines high levels of memory storage with long retention times and significantly outperforms alternative models. As a result, we suggest that memory storage requires synapses with multiple states exhibiting dynamics over a wide range of timescales, and we suggest experimental tests of this hypothesis.

  8. Cascade Apartments: Deep Energy Multifamily Retrofit

    SciTech Connect

    Gordon, A.; Mattheis, L.; Kunkle, R.; Howard, L.; Lubliner, M.

    2014-02-01

    In December of 2009-10, King County Housing Authority (KCHA) implemented energy retrofit improvements in the Cascade multifamily community, located in Kent, Washington (marine climate.)This research effort involved significant coordination from stakeholders KCHA, WA State Department of Commerce, utility Puget Sound Energy, and Cascade tenants. This report focuses on the following three primary BA research questions: 1. What are the modeled energy savings using DOE low income weatherization approved TREAT software? 2. How did the modeled energy savings compare with measured energy savings from aggregate utility billing analysis? 3. What is the Savings to Investment Ratio (SIR) of the retrofit package after considering utility window incentives and KCHA capitol improvement funding.

  9. Cascade Apartments: Deep Energy Multifamily Retrofit

    SciTech Connect

    Gordon, A.; Mattheis, L.; Kunkle, R.; Howard, L.; Lubliner, M.

    2014-02-01

    In December of 2009-10, King County Housing Authority (KCHA) implemented energy retrofit improvements in the Cascade multifamily community, located in Kent, Washington (marine climate.)This research effort involved significant coordination from stakeholders KCHA, WA State Department of Commerce, utility Puget Sound Energy, and Cascade tenants. This report focuses on the following three primary BA research questions : 1. What are the modeled energy savings using DOE low income weatherization approved TREAT software? 2. How did the modeled energy savings compare with measured energy savings from aggregate utility billing analysis? 3. What is the Savings to Investment Ratio (SIR) of the retrofit package after considering utility window incentives and KCHA capitol improvement funding.

  10. Multiplicative-cascade dynamics in pole balancing.

    PubMed

    Harrison, Henry S; Kelty-Stephen, Damian G; Vaz, Daniela V; Michaels, Claire F

    2014-06-01

    Pole balancing is a key task for probing the prospective control that organisms must engage in for purposeful action. The temporal structure of pole-balancing behaviors will reflect the on-line operation of control mechanisms needed to maintain an upright posture. In this study, signatures of multifractality are sought and found in time series of the vertical angle of a pole balanced on the fingertip. Comparisons to surrogate time series reveal multiplicative-cascade dynamics and interactivity across scales. In addition, simulations of a pole-balancing model generating on-off intermittency [J. L. Cabrera and J. G. Milton, Phys. Rev. Lett. 89, 158702 (2002)] were analyzed. Evidence of multifractality is also evident in simulations, though comparing simulated and participant series reveals a significantly greater contribution of cross-scale interactivity for the latter. These findings suggest that multiplicative-cascade dynamics are an extension of on-off intermittency and play a role in prospective coordination.

  11. Inverse energy cascade in rotational turbulence

    NASA Astrophysics Data System (ADS)

    Yu, Huidan (Whitney); Chen, Rou; Wang, Hengjie

    2012-11-01

    Rotation influences large-scale motions in the Earth's atmosphere and oceans and it is also important in many industrial applications such as turbo machinery, rotor-craft, and rotating channel etc. We study rotation effects on decaying isotropic turbulence through direct numerical simulation using lattice Boltzmann method. A Coriolis force characterized by the angular velocity of the frame of reference Ω is included in the lattice Boltzmann equations. The effects of rotation on fundamental turbulence features such as kinetic energy and enstrophy decay, energy spectrum, etc. are studied. The decay laws are quantitatively captured. Inverse energy cascade are observed in the 3D turbulence with and without rotation. The scaling of the inverse energy cascade and its relation to initial energy spectrum are explored. Indiana University-Purdue University Indianapolis (IUPUI).

  12. Environmental solid particle effects on compressor cascade performance

    NASA Technical Reports Server (NTRS)

    Tabakoff, W.; Balan, C.

    1982-01-01

    The effect of suspended solid particles on the performance of the compressor cascade was investigated experimentally in a specially built cascade tunnel, using quartz sand particles. The cascades were made of NACA 65(10)10 airfoils. Three cascades were tested, one accelerating cascade and two diffusing cascades. The theoretical analysis assumes inviscid and incompressible two dimensional flow. The momentum exchange between the fluid and the particle is accounted for by the interphase force terms in the fluid momentum equation. The modified fluid phase momentum equations and the continuity equation are reduced to the conventional stream function vorticity formulation. The method treats the fluid phase in the Eulerian system and the particle phase in Lagrangian system. The experimental results indicate a small increase in the blade surface static pressures, while the theoretical results indicate a small decrease. The theoretical analysis, also predicts the loss in total pressure associated with the particulate flow through the cascade.

  13. Electrophilic and nucleophilic enzymatic cascade reactions in biosynthesis.

    PubMed

    Ueberbacher, Barbara T; Hall, Mélanie; Faber, Kurt

    2012-03-01

    The biosynthesis of cyclic terpenoids and polyethers involves enzyme-initiated cascade reactions for ring formation. While the former are obtained by electrophilic cascades through carbenium ions as intermediates, cyclic polyethers are formed by nucleophilic cascade reactions of (poly)epoxide precursors. These mechanistically complementary pathways follow common principles via (i) triggering of the cascade by forming a reactive intermediate ('initiation'), (ii) sequential 'proliferation' of the cyclization and finally (iii) 'termination' of the cascade. As analyzed in this concept paper, the multiplicity of precursors, combined with various initiation and termination routes and kinetically favored or disfavored cyclization modes accounts for the enormous diversity in cyclic terpenoid and polyether scaffolds. Although the essential role of enzymes in the triggering of these cascades is reasonably well understood, remarkably little is known about their influence in proliferation reactions, especially those implying kinetically disfavored (anti-Markovnikov and anti-Baldwin) routes. Mechanistic analysis of enzymatic cascade reactions provides biomimetic strategies for natural product synthesis.

  14. Cascading failure in the wireless sensor scale-free networks

    NASA Astrophysics Data System (ADS)

    Liu, Hao-Ran; Dong, Ming-Ru; Yin, Rong-Rong; Han, Li

    2015-05-01

    In the practical wireless sensor networks (WSNs), the cascading failure caused by a failure node has serious impact on the network performance. In this paper, we deeply research the cascading failure of scale-free topology in WSNs. Firstly, a cascading failure model for scale-free topology in WSNs is studied. Through analyzing the influence of the node load on cascading failure, the critical load triggering large-scale cascading failure is obtained. Then based on the critical load, a control method for cascading failure is presented. In addition, the simulation experiments are performed to validate the effectiveness of the control method. The results show that the control method can effectively prevent cascading failure. Project supported by the Natural Science Foundation of Hebei Province, China (Grant No. F2014203239), the Autonomous Research Fund of Young Teacher in Yanshan University (Grant No. 14LGB017) and Yanshan University Doctoral Foundation, China (Grant No. B867).

  15. Evolution of Vertebrate Phototransduction: Cascade Activation

    PubMed Central

    Lamb, Trevor D.; Patel, Hardip; Chuah, Aaron; Natoli, Riccardo C.; Davies, Wayne I. L.; Hart, Nathan S.; Collin, Shaun P.; Hunt, David M.

    2016-01-01

    We applied high-throughput sequencing to eye tissue from several species of basal vertebrates (a hagfish, two species of lamprey, and five species of gnathostome fish), and we analyzed the mRNA sequences for the proteins underlying activation of the phototransduction cascade. The molecular phylogenies that we constructed from these sequences are consistent with the 2R WGD model of two rounds of whole genome duplication. Our analysis suggests that agnathans retain an additional representative (that has been lost in gnathostomes) in each of the gene families we studied; the evidence is strong for the G-protein α subunit (GNAT) and the cGMP phosphodiesterase (PDE6), and indicative for the cyclic nucleotide-gated channels (CNGA and CNGB). Two of the species (the hagfish Eptatretus cirrhatus and the lamprey Mordacia mordax) possess only a single class of photoreceptor, simplifying deductions about the composition of cascade protein isoforms utilized in their photoreceptors. For the other lamprey, Geotria australis, analysis of the ratios of transcript levels in downstream and upstream migrant animals permits tentative conclusions to be drawn about the isoforms used in four of the five spectral classes of photoreceptor. Overall, our results suggest that agnathan rod-like photoreceptors utilize the same GNAT1 as gnathostomes, together with a homodimeric PDE6 that may be agnathan-specific, whereas agnathan cone-like photoreceptors utilize a GNAT that may be agnathan-specific, together with the same PDE6C as gnathostomes. These findings help elucidate the evolution of the vertebrate phototransduction cascade from an ancestral chordate phototransduction cascade that existed prior to the vertebrate radiation. PMID:27189541

  16. Transonic Cascade Measurements to Support Analytical Modeling

    DTIC Science & Technology

    2007-11-02

    RECEIVED JUL 0 12005 FINAL REPORT FOR: AFOSR GRANT F49260-02-1-0284 TRANSONIC CASCADE MEASUREMENTS TO SUPPORT ANALYTICAL MODELING Paul A. Durbin ...PAD); 650-723-1971 (JKE) durbin @vk.stanford.edu; eaton@vk.stanford.edu submitted to: Attn: Dr. John Schmisseur Air Force Office of Scientific Research...both spline and control points for subsequent wall shape definitions. An algebraic grid generator was used to generate the grid for the blade-wall

  17. A cascaded coding scheme for error control

    NASA Technical Reports Server (NTRS)

    Shu, L.; Kasami, T.

    1985-01-01

    A cascade coding scheme for error control is investigated. The scheme employs a combination of hard and soft decisions in decoding. Error performance is analyzed. If the inner and outer codes are chosen properly, extremely high reliability can be attained even for a high channel bit-error-rate. Some example schemes are evaluated. They seem to be quite suitable for satellite down-link error control.

  18. Cascade solar cell having conductive interconnects

    DOEpatents

    Borden, Peter G.; Saxena, Ram R.

    1982-10-26

    Direct ohmic contact between the cells in an epitaxially grown cascade solar cell is obtained by means of conductive interconnects formed through grooves etched intermittently in the upper cell. The base of the upper cell is directly connected by the conductive interconnects to the emitter of the bottom cell. The conductive interconnects preferably terminate on a ledge formed in the base of the upper cell.

  19. Unsteady Pressure Distributions on Airfoils in Cascade.

    DTIC Science & Technology

    1980-04-01

    of thin airfoil theory has been used by Henderson (-ftj’ and Bruce (1-7-)’to derive expressions for the unsteady response which includes the cascade...model in conjunction with the assumptions of thin airfoil theory has been used by Henderson (16) and Bruce (17) to derive expressions for the unsteady...effect, that is, a sharp change in the unsteady lift when the disturbance wavelength equals the blade spacing. Bruce (19) further extends this theory to

  20. Cascade flutter analysis with transient response aerodynamics

    NASA Technical Reports Server (NTRS)

    Bakhle, Milind A.; Mahajan, Aparajit J.; Keith, Theo G., Jr.; Stefko, George L.

    1991-01-01

    Two methods for calculating linear frequency domain aerodynamic coefficients from a time marching Full Potential cascade solver are developed and verified. In the first method, the Influence Coefficient, solutions to elemental problems are superposed to obtain the solutions for a cascade in which all blades are vibrating with a constant interblade phase angle. The elemental problem consists of a single blade in the cascade oscillating while the other blades remain stationary. In the second method, the Pulse Response, the response to the transient motion of a blade is used to calculate influence coefficients. This is done by calculating the Fourier Transforms of the blade motion and the response. Both methods are validated by comparison with the Harmonic Oscillation method and give accurate results. The aerodynamic coefficients obtained from these methods are used for frequency domain flutter calculations involving a typical section blade structural model. An eigenvalue problem is solved for each interblade phase angle mode and the eigenvalues are used to determine aeroelastic stability. Flutter calculations are performed for two examples over a range of subsonic Mach numbers.

  1. High power, electrically tunable quantum cascade lasers

    NASA Astrophysics Data System (ADS)

    Slivken, Steven; Razeghi, Manijeh

    2016-02-01

    Mid-infrared laser sources (3-14 μm wavelengths) which have wide spectral coverage and high output power are attractive for many applications. This spectral range contains unique absorption fingerprints of most molecules, including toxins, explosives, and nerve agents. Infrared spectroscopy can also be used to detect important biomarkers, which can be used for medical diagnostics by means of breath analysis. The challenge is to produce a broadband midinfrared source which is small, lightweight, robust, and inexpensive. We are currently investigating monolithic solutions using quantum cascade lasers. A wide gain bandwidth is not sufficient to make an ideal spectroscopy source. Single mode output with rapid tuning is desirable. For dynamic wavelength selection, our group is developing multi-section laser geometries with wide electrical tuning (hundreds of cm-1). These devices are roughly the same size as a traditional quantum cascade lasers, but tuning is accomplished without any external optical components. When combined with suitable amplifiers, these lasers are capable of multi-Watt single mode output powers. This manuscript will describe our current research efforts and the potential for high performance, broadband electrical tuning with the quantum cascade laser.

  2. Trophic cascade alters ecosystem carbon exchange.

    PubMed

    Strickland, Michael S; Hawlena, Dror; Reese, Aspen; Bradford, Mark A; Schmitz, Oswald J

    2013-07-02

    Trophic cascades--the indirect effects of carnivores on plants mediated by herbivores--are common across ecosystems, but their influence on biogeochemical cycles, particularly the terrestrial carbon cycle, are largely unexplored. Here, using a (13)C pulse-chase experiment, we demonstrate how trophic structure influences ecosystem carbon dynamics in a meadow system. By manipulating the presence of herbivores and predators, we show that even without an initial change in total plant or herbivore biomass, the cascading effects of predators in this system begin to affect carbon cycling through enhanced carbon fixation by plants. Prolonged cascading effects on plant biomass lead to slowing of carbon loss via ecosystem respiration and reallocation of carbon among plant aboveground and belowground tissues. Consequently, up to 1.4-fold more carbon is retained in plant biomass when carnivores are present compared with when they are absent, owing primarily to greater carbon storage in grass and belowground plant biomass driven largely by predator nonconsumptive (fear) effects on herbivores. Our data highlight the influence that the mere presence of predators, as opposed to direct consumption of herbivores, can have on carbon uptake, allocation, and retention in terrestrial ecosystems.

  3. Cascade laser applications: trends and challenges

    NASA Astrophysics Data System (ADS)

    d'Humières, B.; Margoto, Éric; Fazilleau, Yves

    2016-03-01

    When analyses need rapid measurements, cost effective monitoring and miniaturization, tunable semiconductor lasers can be very good sources. Indeed, applications like on-field environmental gas analysis or in-line industrial process control are becoming available thanks to the advantage of tunable semiconductor lasers. Advances in cascade lasers (CL) are revolutionizing Mid-IR spectroscopy with two alternatives: interband cascade lasers (ICL) in the 3-6μm spectrum and quantum cascade lasers (QCL), with more power from 3 to 300μm. The market is getting mature with strong players for driving applications like industry, environment, life science or transports. CL are not the only Mid-IR laser source. In fact, a strong competition is now taking place with other technologies like: OPO, VCSEL, Solid State lasers, Gas, SC Infrared or fiber lasers. In other words, CL have to conquer a share of the Mid-IR application market. Our study is a market analysis of CL technologies and their applications. It shows that improvements of components performance, along with the progress of infrared laser spectroscopy will drive the CL market growth. We compare CL technologies with other Mid-IR sources and estimate their share in each application market.

  4. Quantifying and Tracing Information Cascades in Swarms

    PubMed Central

    Wang, X. Rosalind; Miller, Jennifer M.; Lizier, Joseph T.; Prokopenko, Mikhail; Rossi, Louis F.

    2012-01-01

    We propose a novel, information-theoretic, characterisation of cascades within the spatiotemporal dynamics of swarms, explicitly measuring the extent of collective communications. This is complemented by dynamic tracing of collective memory, as another element of distributed computation, which represents capacity for swarm coherence. The approach deals with both global and local information dynamics, ultimately discovering diverse ways in which an individual’s spatial position is related to its information processing role. It also allows us to contrast cascades that propagate conflicting information with waves of coordinated motion. Most importantly, our simulation experiments provide the first direct information-theoretic evidence (verified in a simulation setting) for the long-held conjecture that the information cascades occur in waves rippling through the swarm. Our experiments also exemplify how features of swarm dynamics, such as cascades’ wavefronts, can be filtered and predicted. We observed that maximal information transfer tends to follow the stage with maximal collective memory, and principles like this may be generalised in wider biological and social contexts. PMID:22808095

  5. A cascade feedback control approach for hypnosis.

    PubMed

    Puebla, Hector; Alvarez-Ramírez, José

    2005-10-01

    This article studies the problem of controlling the drug administration during an anesthesia process, where muscle relaxation, analgesia, and hypnosis are regulated by means of monitored administration of specific drugs. On the basis of a seventh-order nonlinear pharmacokinetic-pharmacodynamic representation of the hypnosis process dynamics, a cascade (master/slave) feedback control structure for controlling the bispectral index (BIS) is proposed. The master controller compares the measured BIS with its reference value to provide the expired isoflurane concentration reference to the slave controller. In turn, the slave controller manipulates the anesthetic isoflurane concentration entering the anesthetic system to achieve the reference from the master controller. The advantage of the proposed cascade control structure with respect to its noncascade counterpart is that the former provides operation protection against BIS measurement failures. In fact, under a BIS measurement fault, the master control feedback is broken and the slave controller operates under a safe reference value. Extensive numerical simulations are used to illustrate the functioning of the proposed cascade control structure.

  6. Prediction of Cascading Failures in Spatial Networks.

    PubMed

    Shunkun, Yang; Jiaquan, Zhang; Dan, Lu

    2016-01-01

    Cascading overload failures are widely found in large-scale parallel systems and remain a major threat to system reliability; therefore, they are of great concern to maintainers and managers of different systems. Accurate cascading failure prediction can provide useful information to help control networks. However, for a large, gradually growing network with increasing complexity, it is often impractical to explore the behavior of a single node from the perspective of failure propagation. Fortunately, overload failures that propagate through a network exhibit certain spatial-temporal correlations, which allows the study of a group of nodes that share common spatial and temporal characteristics. Therefore, in this study, we seek to predict the failure rates of nodes in a given group using machine-learning methods. We simulated overload failure propagations in a weighted lattice network that start with a center attack and predicted the failure percentages of different groups of nodes that are separated by a given distance. The experimental results of a feedforward neural network (FNN), a recurrent neural network (RNN) and support vector regression (SVR) all show that these different models can accurately predict the similar behavior of nodes in a given group during cascading overload propagation.

  7. Cascading failures in ac electricity grids.

    PubMed

    Rohden, Martin; Jung, Daniel; Tamrakar, Samyak; Kettemann, Stefan

    2016-09-01

    Sudden failure of a single transmission element in a power grid can induce a domino effect of cascading failures, which can lead to the isolation of a large number of consumers or even to the failure of the entire grid. Here we present results of the simulation of cascading failures in power grids, using an alternating current (AC) model. We first apply this model to a regular square grid topology. For a random placement of consumers and generators on the grid, the probability to find more than a certain number of unsupplied consumers decays as a power law and obeys a scaling law with respect to system size. Varying the transmitted power threshold above which a transmission line fails does not seem to change the power-law exponent q≈1.6. Furthermore, we study the influence of the placement of generators and consumers on the number of affected consumers and demonstrate that large clusters of generators and consumers are especially vulnerable to cascading failures. As a real-world topology, we consider the German high-voltage transmission grid. Applying the dynamic AC model and considering a random placement of consumers, we find that the probability to disconnect more than a certain number of consumers depends strongly on the threshold. For large thresholds the decay is clearly exponential, while for small ones the decay is slow, indicating a power-law decay.

  8. Analysis of cascading failure in gene networks.

    PubMed

    Sun, Longxiao; Wang, Shudong; Li, Kaikai; Meng, Dazhi

    2012-01-01

    It is an important subject to research the functional mechanism of cancer-related genes make in formation and development of cancers. The modern methodology of data analysis plays a very important role for deducing the relationship between cancers and cancer-related genes and analyzing functional mechanism of genome. In this research, we construct mutual information networks using gene expression profiles of glioblast and renal in normal condition and cancer conditions. We investigate the relationship between structure and robustness in gene networks of the two tissues using a cascading failure model based on betweenness centrality. Define some important parameters such as the percentage of failure nodes of the network, the average size-ratio of cascading failure, and the cumulative probability of size-ratio of cascading failure to measure the robustness of the networks. By comparing control group and experiment groups, we find that the networks of experiment groups are more robust than that of control group. The gene that can cause large scale failure is called structural key gene. Some of them have been confirmed to be closely related to the formation and development of glioma and renal cancer respectively. Most of them are predicted to play important roles during the formation of glioma and renal cancer, maybe the oncogenes, suppressor genes, and other cancer candidate genes in the glioma and renal cancer cells. However, these studies provide little information about the detailed roles of identified cancer genes.

  9. Cascading failures in ac electricity grids

    NASA Astrophysics Data System (ADS)

    Rohden, Martin; Jung, Daniel; Tamrakar, Samyak; Kettemann, Stefan

    2016-09-01

    Sudden failure of a single transmission element in a power grid can induce a domino effect of cascading failures, which can lead to the isolation of a large number of consumers or even to the failure of the entire grid. Here we present results of the simulation of cascading failures in power grids, using an alternating current (AC) model. We first apply this model to a regular square grid topology. For a random placement of consumers and generators on the grid, the probability to find more than a certain number of unsupplied consumers decays as a power law and obeys a scaling law with respect to system size. Varying the transmitted power threshold above which a transmission line fails does not seem to change the power-law exponent q ≈1.6 . Furthermore, we study the influence of the placement of generators and consumers on the number of affected consumers and demonstrate that large clusters of generators and consumers are especially vulnerable to cascading failures. As a real-world topology, we consider the German high-voltage transmission grid. Applying the dynamic AC model and considering a random placement of consumers, we find that the probability to disconnect more than a certain number of consumers depends strongly on the threshold. For large thresholds the decay is clearly exponential, while for small ones the decay is slow, indicating a power-law decay.

  10. Catastrophic cascade of failures in interdependent networks

    NASA Astrophysics Data System (ADS)

    Buldyrev, Sergey V.; Havlin, Shlomo; Parshani, Roni; Paul, Gerald; Stanley, H. Eugene

    2010-03-01

    Many complex systems are coupled together and therefore should be modeled by multiple interdependent networks. For example, a power network in which the nodes are power stations and a communication network in which the nodes are computers, are interdependent. In interdependent networks, failure of nodes in one network, cause failure of dependent nodes in another network. This may happen recursively and can lead to a cascade of failures: a failure of a very small fraction of nodes in one network may lead to the complete fragmentation of a system. We provide a framework for understanding the robustness of interacting networks subject to such cascading failures and provide a basic analytic approach that may be useful in future work. We present exact analytical solutions for the critical fraction of nodes that upon removal will lead to a failure cascade and to a complete fragmentation of two randomly connected interdependent networks in terms of the generating functions of their degree distributions. Surprisingly, networks with broad degree distributions are more vulnerable to random failures than networks with narrow degree distributions.

  11. HIV treatment cascade in tuberculosis patients

    PubMed Central

    Lessells, Richard J.; Swaminathan, Soumya; Godfrey-Faussett, Peter

    2015-01-01

    Purpose of review Globally, the number of deaths associated with tuberculosis (TB) and HIV coinfection remains unacceptably high. We review the evidence around the impact of strengthening the HIV treatment cascade in TB patients and explore recent findings about how best to deliver integrated TB/HIV services. Recent findings There is clear evidence that the timely provision of antiretroviral therapy (ART) reduces mortality in TB/HIV coinfected adults. Despite this, globally in 2013, only around a third of known HIV-positive TB cases were treated with ART. Although there is some recent evidence exploring the barriers to achieve high coverage of HIV testing and ART initiation in TB patients, our understanding of which factors are most important and how best to address these within different health systems remains incomplete. There are some examples of good practice in the delivery of integrated TB/HIV services to improve the HIV treatment cascade. However, evidence of the impact of such strategies is of relatively low quality for informing integrated TB/HIV programming more broadly. In most settings, there remain barriers to higher-level organizational and functional integration. Summary There remains a need for commitment to patient-centred integrated TB/HIV care in countries affected by the dual epidemic. There is a need for better quality evidence around how best to deliver integrated services to strengthen the HIV treatment cascade in TB patients, both at primary healthcare level and within community settings. PMID:26352390

  12. Microbial Cretaceous park: biodiversity of microbial fossils entrapped in amber

    NASA Astrophysics Data System (ADS)

    Martín-González, Ana; Wierzchos, Jacek; Gutiérrez, Juan C.; Alonso, Jesús; Ascaso, Carmen

    2009-05-01

    Microorganisms are the most ancient cells on this planet and they include key phyla for understanding cell evolution and Earth history, but, unfortunately, their microbial records are scarce. Here, we present a critical review of fossilized prokaryotic and eukaryotic microorganisms entrapped in Cretaceous ambers (but not exclusively from this geological period) obtained from deposits worldwide. Microbiota in ambers are rather diverse and include bacteria, fungi, and protists. We comment on the most important microbial records from the last 25 years, although it is not an exhaustive bibliographic compilation. The most frequently reported eukaryotic microfossils are shells of amoebae and protists with a cell wall or a complex cortex. Likewise, diverse dormant stages (palmeloid forms, resting cysts, spores, etc.) are abundant in ambers. Besides, viral and protist pathogens have been identified inside insects entrapped in amber. The situation regarding filamentous bacteria and fungi is quite confusing because in some cases, the same record was identified consecutively as a member of these phylogenetically distant groups. To avoid these identification errors in the future, we propose to apply a more resolute microscopic and analytical method in amber studies. Also, we discuss the most recent findings about ancient DNA repair and bacterial survival in remote substrates, which support the real possibility of ancient DNA amplification and bacterial resuscitation from Cretaceous resins.

  13. Microbial Cretaceous park: biodiversity of microbial fossils entrapped in amber.

    PubMed

    Martín-González, Ana; Wierzchos, Jacek; Gutiérrez, Juan C; Alonso, Jesús; Ascaso, Carmen

    2009-05-01

    Microorganisms are the most ancient cells on this planet and they include key phyla for understanding cell evolution and Earth history, but, unfortunately, their microbial records are scarce. Here, we present a critical review of fossilized prokaryotic and eukaryotic microorganisms entrapped in Cretaceous ambers (but not exclusively from this geological period) obtained from deposits worldwide. Microbiota in ambers are rather diverse and include bacteria, fungi, and protists. We comment on the most important microbial records from the last 25 years, although it is not an exhaustive bibliographic compilation. The most frequently reported eukaryotic microfossils are shells of amoebae and protists with a cell wall or a complex cortex. Likewise, diverse dormant stages (palmeloid forms, resting cysts, spores, etc.) are abundant in ambers. Besides, viral and protist pathogens have been identified inside insects entrapped in amber. The situation regarding filamentous bacteria and fungi is quite confusing because in some cases, the same record was identified consecutively as a member of these phylogenetically distant groups. To avoid these identification errors in the future, we propose to apply a more resolute microscopic and analytical method in amber studies. Also, we discuss the most recent findings about ancient DNA repair and bacterial survival in remote substrates, which support the real possibility of ancient DNA amplification and bacterial resuscitation from Cretaceous resins.

  14. Deep-Subterranean Microbial Habitats in the Hishikari Epithermal Gold Mine: Active Thermophilic Microbial Communities and Endolithic Ancient Microbial Relicts.

    NASA Astrophysics Data System (ADS)

    Hirayama, H.; Takai, K.; Inagaki, F.; Horikoshi, K.

    2001-12-01

    Deep subterranean microbial community structures in an epithermal gold-silver deposit, Hishikari gold mine, southern part of Kyusyu Japan, were evaluated through the combined use of enrichment culture methods and culture-independent molecular surveys. The geologic setting of the Hishikari deposit is composed of three lithologies; basement oceanic sediments of the Cretaceous Shimanto Supergroup, Quaternary andesites, and auriferous quartz vein. We studied the drilled core rock of these, and the geothermal hot waters from the basement aquifers collected by means of the dewatering system located at the deepest level in the mining sites. Culture-independent molecular phylogenetic analyses of PCR-amplified ribosomal DNA (rDNA) recovered from drilled cores suggested that the deep-sea oceanic microbial communities were present as ancient indigenous relicts confined in the Shimanto basement. On the other hand, genetic signals of active thermophilic microbial communities, mainly consisting of thermophilic hydrogen-oxidizer within Aquificales, thermophilic methanotroph within g-Proteobacteria and yet-uncultivated bacterium OPB37 within b-Proteobacteria, were detected with these of oceanic relicts from the subterranean geothermal hot aquifers (temp. 70-100ºC). Successful cultivation and FISH analyses strongly supported that these thermophilic lithotrophic microorganisms could be exactly active and they grew using geochemically produced hydrogen and methane gasses as nutrients. Based on these results, the deep-subsurface biosphere occurring in the Hishikari epithermal gold mine was delineated as endolithic ancient microbial relicts and modern habitats raising active lithotrophic thermophiles associated with the geological and geochemical features of the epithermal gold deposit.

  15. Correlation of Pleistocene deposits in the Northwestern US

    SciTech Connect

    Easterbrook, D.J.

    1985-01-01

    The discover that the age of the Salmon Springs Drift at its type locality was early Pleistocene, rather than early Wisconsin (Easterbrook, Briggs, Westgate, and Gorton, 1981), invalidated correlations of the penultimate glaciation at many localities in the Pacific Northwest and resulted in confusion over deposits previously designated as Salmon Springs Drift. Some of these deposits are much younger than the type Salmon Springs Drift and are correlated with the Possession or Double Bluff Drifts. The Orting Drift in the Pudget Lowland, the Wedekind Creek Fm. and early Donkey Creek Drift in the Olympic Mountains and the Logan Hill Fm. in the Cascade Mountains are all deeply weathered, suggesting great antiquity and possible correlation. The reversely magnetized Orting Drift was deposited during the Matuyama reversed Epoch and might be as old as two million years. Stuck Drift in the Puget Lowland is correlated with the Helm Creek Drift and part of the Donkey Creek Drift in the Olympic Mountains, and the Wingate Hill Drift in the Cascades. Lower Salmon Springs Drift is correlated with Park Creek Drift in the Olympic Mountains and pre-Thorp Drift in the Cascades. Double Bluff Drift, considered Illinoian in age on the basis of amino acid analyses, is correlated with the McCleary Drift, Mobray Drift, part of the Humptulips Drift, and drift previously mapped as Salmon Springs in the Olympic Mountains. The Hayden Creek Drift and part of the Kittitas Drift are possible correlatives in the Cascades.

  16. Age and structure of a model vapour-deposited glass

    PubMed Central

    Reid, Daniel R.; Lyubimov, Ivan; Ediger, M. D.; de Pablo, Juan J.

    2016-01-01

    Glass films prepared by a process of physical vapour deposition have been shown to have thermodynamic and kinetic stability comparable to those of ordinary glasses aged for thousands of years. A central question in the study of vapour-deposited glasses, particularly in light of new knowledge regarding anisotropy in these materials, is whether the ultra-stable glassy films formed by vapour deposition are ever equivalent to those obtained by liquid cooling. Here we present a computational study of vapour deposition for a two-dimensional glass forming liquid using a methodology, which closely mimics experiment. We find that for the model considered here, structures that arise in vapour-deposited materials are statistically identical to those observed in ordinary glasses, provided the two are compared at the same inherent structure energy. We also find that newly deposited hot molecules produce cascades of hot particles that propagate far into the film, possibly influencing the relaxation of the material. PMID:27762262

  17. EVAPORITE MICROBIAL FILMS, MATS, MICROBIALITES AND STROMATOLITES

    SciTech Connect

    Brigmon, R; Penny Morris, P; Garriet Smith, G

    2008-01-28

    Evaporitic environments are found in a variety of depositional environments as early as the Archean. The depositional settings, microbial community and mineralogical composition vary significantly as no two settings are identical. The common thread linking all of the settings is that evaporation exceeds precipitation resulting in elevated concentrations of cations and anions that are higher than in oceanic systems. The Dead Sea and Storrs Lake are examples of two diverse modern evaporitic settings as the former is below sea level and the latter is a coastal lake on an island in the Caribbean. Each system varies in water chemistry as the Dead Sea dissolved ions originate from surface weathered materials, springs, and aquifers while Storrs Lake dissolved ion concentration is primarily derived from sea water. Consequently some of the ions, i.e., Sr, Ba are found at significantly lower concentrations in Storrs Lake than in the Dead Sea. The origin of the dissolved ions are ultimately responsible for the pH of each system, alkaline versus mildly acidic. Each system exhibits unique biogeochemical properties as the extreme environments select certain microorganisms. Storrs Lake possesses significant biofilms and stromatolitic deposits and the alkalinity varies depending on rainfall and storm activity. The microbial community Storrs Lake is much more diverse and active than those observed in the Dead Sea. The Dead Sea waters are mildly acidic, lack stromatolites, and possess a lower density of microbial populations. The general absence of microbial and biofilm fossilization is due to the depletion of HCO{sub 3} and slightly acidic pH.

  18. Biofilms: A microbial home

    PubMed Central

    Chandki, Rita; Banthia, Priyank; Banthia, Ruchi

    2011-01-01

    Microbial biofilms are mainly implicated in etiopathogenesis of caries and periodontal disease. Owing to its properties, these pose great challenges. Continuous and regular disruption of these biofilms is imperative for prevention and management of oral diseases. This essay provides a detailed insight into properties, mechanisms of etiopathogenesis, detection and removal of these microbial biofilms. PMID:21976832

  19. Inflight microbial analysis technology

    NASA Technical Reports Server (NTRS)

    Pierson, Duane L.; Brown, Harlan D.

    1987-01-01

    This paper provides an assessment of functional characteristics needed in the microbial water analysis system being developed for Space Station. Available technology is reviewed with respect to performing microbial monitoring, isolation, or identification functions. An integrated system composed of three different technologies is presented.

  20. Survey of tools for risk assessment of cascading outages

    SciTech Connect

    Papic, Milorad; Bell, Keith; Chen, Yousu; Dobson, Ian; Fonte, Louis; Haq, Enamul; Hines, Paul; Kirschen, Daniel; Luo, Xiaochuan; Miller, Stephen; Samaan, Nader A.; Vaiman, Marianna; Varghese, Matthew; Zhang, Pei

    2011-10-01

    Abstract-This paper is a result of ongoing activity carried out by Understanding, Prediction, Mitigation and Restoration of Cascading Failures Task Force under IEEE Computer Analytical Methods Subcommittee (CAMS). The task force's previous papers [1, 2] are focused on general aspects of cascading outages such as understanding, prediction, prevention and restoration from cascading failures. This is the second of two new papers, which extend this previous work to summarize the state of the art in cascading failure risk analysis methodologies and modeling tools. The first paper reviews the state of the art in methodologies for performing risk assessment of potential cascading outages [3]. This paper describes the state of the art in cascading failure modeling tools, documenting the view of experts representing utilities, universities and consulting companies. The paper is intended to constitute a valid source of information and references about presently available tools that deal with prediction of cascading failure events. This effort involves reviewing published literature and other documentation from vendors, universities and research institutions. The assessment of cascading outages risk evaluation is in continuous evolution. Investigations to gain even better understanding and identification of cascading events are the subject of several research programs underway aimed at solving the complexity of these events that electrical utilities face today. Assessing the risk of cascading failure events in planning and operation for power transmission systems require adequate mathematical tools/software.

  1. Energy flow along the medium-induced parton cascade

    SciTech Connect

    Blaizot, J.-P.

    2016-05-15

    We discuss the dynamics of parton cascades that develop in dense QCD matter, and contrast their properties with those of similar cascades of gluon radiation in vacuum. We argue that such cascades belong to two distinct classes that are characterized respectively by an increasing or a constant (or decreasing) branching rate along the cascade. In the former class, of which the BDMPS, medium-induced, cascade constitutes a typical example, it takes a finite time to transport a finite amount of energy to very soft quanta, while this time is essentially infinite in the latter case, to which the DGLAP cascade belongs. The medium induced cascade is accompanied by a constant flow of energy towards arbitrary soft modes, leading eventually to the accumulation of the initial energy of the leading particle at zero energy. It also exhibits scaling properties akin to wave turbulence. These properties do not show up in the cascade that develops in vacuum. There, the energy accumulates in the spectrum at smaller and smaller energy as the cascade develops, but the energy never flows all the way down to zero energy. Our analysis suggests that the way the energy is shared among the offsprings of a splitting gluon has little impact on the qualitative properties of the cascades, provided the kernel that governs the splittings is not too singular.

  2. Data on snow chemistry of the Cascade-Sierra Nevada Mountains

    USGS Publications Warehouse

    Laird, L.B.; Taylor, H.E.; Lombard, R.E.

    1986-01-01

    Snow chemistry data were measured for solutes found in snow core samples collected from the Cascade-Sierra Nevada Mountains from late February to mid-March 1983. The data are part of a study to assess geographic variations in atmospheric deposition in Washington, Oregon, and California. The constituents and properties include pH and concentrations of hydrogen ion, calcium, magnesium, sodium, potassium, chloride, sulfate, nitrate, fluoride, phosphate, ammonium, iron, aluminum, manganese, copper, cadmium, lead, and dissolved organic carbon. Concentrations of arsenic and bromide were below the detection limit. (USGS)

  3. Low-loss hollow waveguide fibers for mid-infrared quantum cascade laser sensing applications.

    PubMed

    Patimisco, Pietro; Spagnolo, Vincenzo; Vitiello, Miriam S; Scamarcio, Gaetano; Bledt, Carlos M; Harrington, James A

    2013-01-21

    We report on single mode optical transmission of hollow core glass waveguides (HWG) coupled with an external cavity mid-IR quantum cascade lasers (QCLs). The QCL mode results perfectly matched to the hybrid HE(11) waveguide mode and the higher losses TE-like modes have efficiently suppressed by the deposited inner dielectric coating. Optical losses down to 0.44 dB/m and output beam divergence of ~5 mrad were measured. Using a HGW fiber with internal core size of 300 µm we obtained single mode laser transmission at 10.54 µm and successful employed it in a quartz enhanced photoacoustic gas sensor setup.

  4. Cave speleothems as repositories of microbial biosignatures

    NASA Astrophysics Data System (ADS)

    Miller, Ana Z.; Jurado, Valme; Pereira, Manuel F. C.; Fernández, Octavio; Calaforra, José M.; Dionísio, Amélia; Saiz-Jimenez, Cesareo

    2015-04-01

    The need to better understand the biodiversity, origins of life on Earth and on other planets, and the wide applications of the microbe-mineral interactions have led to a rapid expansion of interest in subsurface environments. Recently reported results indicated signs of an early wet Mars and rather recent volcanic activity which suggest that Mars's subsurface can house organic molecules or traces of microbial life, making the search for microbial life on Earth's subsurface even more compelling. Caves on Earth are windows into the subsurface that harbor a wide variety of mineral-utilizing microorganisms, which may contribute to the formation of biominerals and unusual microstructures recognized as biosignatures. These environments contain a wide variety of redox interfaces and stable physicochemical conditions, which enhance secondary mineral precipitation and microbial growth under limited organic nutrient inputs. Enigmatic microorganisms and unusual mineral features have been found associated with secondary mineral deposits or speleothems in limestone caves and lava tubes. In this study, Field Emission Scanning Electron Microscopy (FESEM) and Energy Dispersive X-ray spectroscopy (EDS) analyses were conducted on cave speleothem samples to assess microbe-mineral interactions, evaluate biogenicity, as well as to describe unusual mineral formations and microbial features. Microbial mats, extracellular polymeric substances, tubular empty sheaths, mineralized cells, filamentous fabrics, as well as "cell-sized" etch pits or microborings produced by bacterial cells were observed on minerals. These features evidence microbe-mineral interactions and may represent mineralogical signatures of life. We can thus consider that caves on Earth are plausible repositories of terrestrial biosignatures where we can look for microbial signatures. Acknowledgments: AZM acknowledges the support from the Marie Curie Intra-European Fellowship within the 7th European Community Framework

  5. Heat cascading regenerative sorption heat pump

    NASA Technical Reports Server (NTRS)

    Jones, Jack A. (Inventor)

    1995-01-01

    A simple heat cascading regenerative sorption heat pump process with rejected or waste heat from a higher temperature chemisorption circuit (HTCC) powering a lower temperature physisorption circuit (LTPC) which provides a 30% total improvement over simple regenerative physisorption compression heat pumps when ammonia is both the chemisorbate and physisorbate, and a total improvement of 50% or more for LTPC having two pressure stages. The HTCC contains ammonia and a chemisorbent therefor contained in a plurality of canisters, a condenser-evaporator-radiator system, and a heater, operatively connected together. The LTPC contains ammonia and a physisorbent therefor contained in a plurality of compressors, a condenser-evaporator-radiator system, operatively connected together. A closed heat transfer circuit (CHTC) is provided which contains a flowing heat transfer liquid (FHTL) in thermal communication with each canister and each compressor for cascading heat from the HTCC to the LTPC. Heat is regenerated within the LTPC by transferring heat from one compressor to another. In one embodiment the regeneration is performed by another CHTC containing another FHTL in thermal communication with each compressor. In another embodiment the HTCC powers a lower temperature ammonia water absorption circuit (LTAWAC) which contains a generator-absorber system containing the absorbent, and a condenser-evaporator-radiator system, operatively connected together. The absorbent is water or an absorbent aqueous solution. A CHTC is provided which contains a FHTL in thermal communication with the generator for cascading heat from the HTCC to the LTAWAC. Heat is regenerated within the LTAWAC by transferring heat from the generator to the absorber. The chemical composition of the chemisorbent is different than the chemical composition of the physisorbent, and the absorbent. The chemical composition of the FHTL is different than the chemisorbent, the physisorbent, the absorbent, and ammonia.

  6. A stochastic model of cascades in two-dimensional turbulence

    NASA Astrophysics Data System (ADS)

    Ditlevsen, Peter D.

    2012-10-01

    The dual cascade of energy and enstrophy in 2D turbulence cannot easily be understood in terms of an analog to the Richardson-Kolmogorov scenario describing the energy cascade in 3D turbulence. The coherent upscale and downscale fluxes point to non-locality of interactions in spectral space, and thus the specific spatial structure of the flow could be important. Shell models, which lack spatial structure and have only local interactions in spectral space, indeed fail in reproducing the correct scaling for the inverse cascade of energy. In order to exclude the possibility that non-locality of interactions in spectral space is crucial for the dual cascade, we introduce a stochastic spectral model of the cascades which is local in spectral space and which shows the correct scaling for both the direct enstrophy and the inverse energy cascade.

  7. Atomistic Simulation of Displacement Cascades in Zircon

    SciTech Connect

    Devanathan, Ram; Weber, William J.; Corrales, Louis R.; BP McGrail and GA Cragnolino

    2002-05-06

    Low energy displacement cascades in zircon (ZrSiO4) initiated by a Zr primary knock-on atom have been investigated by molecular dynamics simulations using a Coulombic model for long-range interactions, Buckingham potential for short-range interactions and Ziegler-Biersack potentials for close pair interactions. Displacements were found to occur mainly in the O sublattice, and O replacements by a ring mechanism were predominant. Clusters containing Si interstitials bridged by O interstitials, vacancy clusters and anti-site defects were found to occur. This Si-O-Si bridging is considerable in quenched liquid ZrSiO4.

  8. Cascade impactor and jet plate for same

    DOEpatents

    Dahlin, Robert S.; Farthing, William E.; Landham Jr., Edward C.

    2004-02-03

    A sampling system and method for sampling particulate matter from a high-temperature, high-pressure gas stream. A cyclone sampler for use at high temperatures and pressures, and having threadless sacrificial connectors is disclosed. Also disclosed is an improved cascade impactor including jet plates with integral spacers, and alignment features provided for aligning the jet plates with their associated collection substrates. An activated bauxite alkali collector is disclosed, and includes an alumina liner. The sampling system can be operated remotely or locally, and can be permanently installed or configured as a portable system.

  9. Cascaded proton acceleration by collisionless electrostatic shock

    SciTech Connect

    Xu, T. J.; Shen, B. F. E-mail: zhxm@siom.ac.cn; Zhang, X. M. E-mail: zhxm@siom.ac.cn; Yi, L. Q.; Wang, W. P.; Zhang, L. G.; Xu, J. C.; Zhao, X. Y.; Shi, Y.; Liu, C.; Pei, Z. K.

    2015-07-15

    A new scheme for proton acceleration by cascaded collisionless electrostatic shock (CES) is proposed. By irradiating a foil target with a moderate high-intensity laser beam, a stable CES field can be induced, which is employed as the accelerating field for the booster stage of proton acceleration. The mechanism is studied through simulations and theoretical analysis, showing that a 55 MeV seed proton beam can be further accelerated to 265 MeV while keeping a good energy spread. This scheme offers a feasible approach to produce proton beams with energy of hundreds of MeV by existing available high-intensity laser facilities.

  10. Photonic crystal slab quantum cascade detector

    SciTech Connect

    Reininger, Peter Schwarz, Benedikt; Harrer, Andreas; Zederbauer, Tobias; Detz, Hermann; Maxwell Andrews, Aaron; Gansch, Roman; Schrenk, Werner; Strasser, Gottfried

    2013-12-09

    In this Letter, we demonstrate the design, fabrication, and characterization of a photonic crystal slab quantum cascade detector (PCS-QCD). By employing a specifically designed resonant cavity, the performance of the photodetector is improved in three distinct ways. The PCS makes the QCD sensitive to surface normal incident light. It resonantly enhances the photon lifetime inside the active zone, thus increasing the photocurrent significantly. And, the construction form of the device inherently decreases the noise. Finally, we compare the characteristics of the PCS-QCD to a PCS - quantum well infrared photodetector and outline the advantages for certain fields of applications.

  11. Chronic traumatic encephalopathy and the availability cascade.

    PubMed

    Solomon, Gary S; Sills, Allen

    2014-09-01

    Chronic traumatic encephalopathy (CTE) in sports has been known for > 85 years, and has experienced a resurgence of interest over the past decade, both in the media and in the scientific community. However, there appears to be a disconnection between the public's perception of CTE and the currently available scientific data. The cognitive bias known as the "availability cascade" has been suggested as a reason to explain this rift in knowledge. This review summarizes and updates the history of CTE in sports, discusses recent epidemiological and autopsy studies, summarizes the evidence base related to CTE in sports, and offers recommendations for future directions.

  12. Auto-tuning of cascade control systems.

    PubMed

    Song, Sihai; Cai, Wenjian; Wang, Ya-Gang

    2003-01-01

    In this paper, a novel auto-tuning method for a cascade control system is proposed. By employing a simple relay feedback test, both inner and outer loop model parameters can be simultaneously identified. Consequently, well-established proportional-integral-derivative (PID) tuning rules can be applied to tune both loops. Compared with existing methods, the new method is simpler and yet more effective. It can be directly integrated into commercially available industrial auto-tuning systems. Some examples are given to illustrate the effectiveness and robustness of the proposed method.

  13. The Cascade of Non-Stationarity

    NASA Astrophysics Data System (ADS)

    Belmont, P.; Kumarasamy, K.; Kelly, S. A.; Schaffrath, K. R.; Beach, T. J.

    2014-12-01

    Landscapes and channel networks are dynamic systems, often characterized by immense variability in time and space. Systematic shifts in hydrologic, geomorphic, or ecologic drivers can cause a cascade of changes within the system, which may fundamentally alter the way the system itself functions. Due to variability in resilience and resisting forces throughout the landscape, this cascade of changes may manifest in different ways within any given system. Humans may also exert considerable influence, often amplifying or damping system response. We illustrate the cascading effects of non-stationary hydrology and geomorphology in the Minnesota River Basin (MRB), a 44,000 km2 natural laboratory in which pervasive landscape disturbance has been triggered by several well-documented events. Rapid base-level lowering 13,400 YBP along the mainstem Minnesota River created a wave of incision, which continues to propagate up tributary channel networks. Temperature and precipitation have changed significantly in the MRB over the past century with rising temperatures, shifting precipitation patterns and an increase in heavy rainfall events. Streamflow has changed drastically and variably throughout the basin with 5% exceedance flows increasing 60-100% in recent decades, as increases in precipitation have been amplified by land management and artificial drainage. Increases in channel width and depth have occurred variably in the mainstem Minnesota River, the actively incising lower (knick zone) reaches of tributaries, and the low gradient, passively meandering reaches above the knick zones. Altered hydrologic regimes and channel morphologies, combined with increased sedimentation and nutrient loading have adversely affected aquatic biota via disruption of life cycles and habitat degradation. Existing landscape, water quality, and flood risk models are poorly equipped to deal with the cascading effects of non-stationarity and therefore may grossly over- or under

  14. Atmospheric deposition fluxes to Monetary Bay

    NASA Astrophysics Data System (ADS)

    Gray, E.; Paytan, A.; Ryan, J.

    2008-12-01

    Atmospheric deposition has been widely recognized as a source of pollutants and nutrients to coastal ecosystems. Specifically, deposition includes nitrogen compounds, sulfur compounds, mercury, pesticides, phosphate, trace metals and other toxic compounds that can travel great distances. Sources of these components include both natural (volcanoes, mineral dust, forest fires) and anthropogenic (fossil fuels, chemical byproducts, incineration of waste) sources, which may contribute to harmful health and environmental impacts such as eutrophication, contaminated fish and harmful algal blooms. This study looks at the flux of aerosol deposition (TSP - total suspended particle load) to Monterey Bay, California. Samples are collected on a cascade impactor aerosol sampler (size fractions PM 2.5 and PM 10) every 48 hours continuously. Preliminary results indicate that the TSP for PM 10 ranged from 0.026 to 0.104 mg m-3 of air and for PM 2.5 from 0.014 to 0.046 mg m-3 of air. Using a deposition velocity of 2 cm s-1 for the large fraction (PM10 - PM 2.5) and a deposition velocity of 0.7 cm s-1 for the fine fraction (PM 2.5) deposition rates are 13 and 86 mg m-2 d-1 respectively.

  15. Large phase shift via polarization-coupling cascading.

    PubMed

    Huo, Juan; Chen, Xianfeng

    2012-06-04

    Herein, we propose a phenomenon of "polarization-coupling (PC) cascading" generated in MgO doped periodically poled lithium niobate crystal (PPMgLN). PC cascading contributes to the effective electro-optical (EO) Kerr effect that is several orders of magnitude stronger than the classical ones. Experiment of Newton's rings demonstrates the large phase accumulation during the PC cascaded processes, and the experimental data is identical with the theoretical simulation.

  16. Independent Stage Control of a Cascade Injector (Postprint)

    DTIC Science & Technology

    2006-10-01

    AFRL-PR-WP-TP-2006-264 INDEPENDENT STAGE CONTROL OF A CASCADE INJECTOR (POSTPRINT) H.L. Meicenheimer, E.J. Gutmark, M.R. Gruber, D.R...SUBTITLE INDEPENDENT STAGE CONTROL OF A CASCADE INJECTOR (POSTPRINT) 5c. PROGRAM ELEMENT NUMBER 61102F 5d. PROJECT NUMBER 2308 5e. TASK NUMBER AI...whether the number of active stages in the cascade injector could be used to control penetration and mixing characteristics. The injector was tested at

  17. Independent Stage Control of a Cascade Injector (Postprint)

    DTIC Science & Technology

    2005-07-01

    AFRL-PR-WP-TP-2006-250 INDEPENDENT STAGE CONTROL OF A CASCADE INJECTOR (POSTPRINT) Heidi L. Meicenheimer, Ephraim J. Gutmark, Campbell D...house 5b. GRANT NUMBER 4. TITLE AND SUBTITLE INDEPENDENT STAGE CONTROL OF A CASCADE INJECTOR (POSTPRINT) 5c. PROGRAM ELEMENT NUMBER 62203F 5d...investigation was to determine whether the number of active stages in the cascade injector could be used to control penetration and mixing characteristics

  18. Stopping pions in high-energy nuclear cascades.

    NASA Technical Reports Server (NTRS)

    Jones, W. V.; Johnson, D. P.; Thompson, J. A.

    1973-01-01

    Results of Monte Carlo calculations for the number and energy spectra of charged pions from nuclear-electromagnetic cascades developing in rock are presented for primary hadron energies ranging from 3 to 3000 GeV. These spectra are given as functions of the longitudinal depth in the absorber and the lateral distance from the cascade axis. The number of charged pions which stop in the absorber increases with the primary energy of the hadron initiating the cascade.

  19. Estimating Failure Propagation in Models of Cascading Blackouts

    SciTech Connect

    Dobson, Ian; Carreras, Benjamin A; Lynch, Vickie E; Nkei, Bertrand; Newman, David E

    2005-09-01

    We compare and test statistical estimates of failure propagation in data from versions of a probabilistic model of loading-dependent cascading failure and a power systems blackout model of cascading transmission line overloads. The comparisons suggest mechanisms affecting failure propagation and are an initial step towards monitoring failure propagation from practical system data. Approximations to the probabilistic model describe the forms of probability distributions of cascade sizes.

  20. Diffraction Limited 3.15 Microns Cascade Diode Lasers

    DTIC Science & Technology

    2014-06-01

    carriers recycling by the cascade pumping . The narrow ridge 6- m-wide waveguides were defined by inductively coupled plasma (ICP) reactive ion etching...diffraction limited, diode lasers, cascade pumping REPORT DOCUMENTATION PAGE 11. SPONSOR/MONITOR’S REPORT NUMBER(S) 10. SPONSOR/MONITOR’S ACRONYM(S...of GaSb-based type-I QW diode lasers by utilizing cascade pumping scheme4. The carriers were recycled with 100% efficiency between two gain stages

  1. Microbial diversity in nonsulfur, sulfur and iron geothermal steam vents.

    PubMed

    Benson, Courtney A; Bizzoco, Richard W; Lipson, David A; Kelley, Scott T

    2011-04-01

    Fumaroles, commonly called steam vents, are ubiquitous features of geothermal habitats. Recent studies have discovered microorganisms in condensed fumarole steam, but fumarole deposits have proven refractory to DNA isolation. In this study, we report the development of novel DNA isolation approaches for fumarole deposit microbial community analysis. Deposit samples were collected from steam vents and caves in Hawaii Volcanoes National Park, Yellowstone National Park and Lassen Volcanic National Park. Samples were analyzed by X-ray microanalysis and classified as nonsulfur, sulfur or iron-dominated steam deposits. We experienced considerable difficulty in obtaining high-yield, high-quality DNA for cloning: only half of all the samples ultimately yielded sequences. Analysis of archaeal 16S rRNA gene sequences showed that sulfur steam deposits were dominated by Sulfolobus and Acidianus, while nonsulfur deposits contained mainly unknown Crenarchaeota. Several of these novel Crenarchaeota lineages were related to chemoautotrophic ammonia oxidizers, indicating that fumaroles represent a putative habitat for ammonia-oxidizing Archaea. We also generated archaeal and bacterial enrichment cultures from the majority of the deposits and isolated members of the Sulfolobales. Our results provide the first evidence of Archaea in geothermal steam deposits and show that fumaroles harbor diverse and novel microbial lineages.

  2. Compounding artefacts with uncertainty, and an amyloid cascade hypothesis that is 'too big to fail'.

    PubMed

    Castellani, Rudy J; Smith, Mark A

    2011-06-01

    With each failure of anti-amyloid-β therapy in clinical trials, new trials are initiated with no hint of slowing down. This may be due, in part, to the fact that the amyloid cascade hypothesis has been so modified over time that it is now impossible to confirm or deny. The hypothesis now states, in effect, that invisible molecules target invisible structures. Still relevant, however, are multiple factors that surely cast some doubt but have either been rationalized or overlooked. Among these are the poor correlation between amyloid-β deposits and disease, the substantial differences between familial and sporadic disease, pathological assessment that indicates the secondary nature of lesions/proteins/cascades, the fact that soluble species are poorly reproducible laboratory phenomena, and the irrelevance of synaptic assessment to pathological interpretation. Although not yet dogma, the premature addition of mild cognitive impairment as the implied in vivo homologue to the soluble toxin-synapse interaction is also problematic. In either case, the amyloid cascade hypothesis continues to dominate the Alzheimer's disease literature and grant applications. The more the neuroscience community perseverates along these lines in the face of accumulating outcome data to the contrary, the more one is left to wonder whether the hypothesis is too big to fail.

  3. The comparison of extraction of energy in two-cascade and one-cascade targets

    SciTech Connect

    Dolgoleva, G. V.; Ponomarev, I. V.

    2016-01-15

    The paper is devoted to numerical designing of cylindrical microtargets on the basis of shock-free compression. When designing microtargets for the controlled thermonuclear fusion, the core tasks are to select geometry and make-up of layers, and the law of energy embedding as well, which allow receiving of “burning” of deuterium- tritium mix, that is, the existence of thermonuclear reactions of working area. Yet, the energy yield as a result of thermonuclear reactions has to be more than the embedded energy (the coefficient of amplification is more than a unit). So, an important issue is the value of the embedded energy. The purpose of the present paper is to study the extraction of energy by working DT area in one-cascade and two-cascade targets. A bigger extraction of energy will contribute to a better burning of DT mix and a bigger energy yield as a result of thermonuclear reactions. The comparison of analytical results to numerical calculations is carried out. The received results show advantages of a two-cascade target compared to a one-cascade one.

  4. Boise Cascade Mill Energy Assessment (Boise Cascade Mill, International Falls, MN)

    SciTech Connect

    2000-12-01

    An integrated effluent heat reduction and water conservation study was performed at the Boise Cascade plant in International Falls, MN. The implementation of 4 projects and 2 process modifications are projected to remove 45.6 Btu/hr from the effluent.

  5. Expansion of Microbial Forensics

    PubMed Central

    Schmedes, Sarah E.; Sajantila, Antti

    2016-01-01

    Microbial forensics has been defined as the discipline of applying scientific methods to the analysis of evidence related to bioterrorism, biocrimes, hoaxes, or the accidental release of a biological agent or toxin for attribution purposes. Over the past 15 years, technology, particularly massively parallel sequencing, and bioinformatics advances now allow the characterization of microorganisms for a variety of human forensic applications, such as human identification, body fluid characterization, postmortem interval estimation, and biocrimes involving tracking of infectious agents. Thus, microbial forensics should be more broadly described as the discipline of applying scientific methods to the analysis of microbial evidence in criminal and civil cases for investigative purposes. PMID:26912746

  6. Large-scale separation and hysteresis in cascades

    NASA Technical Reports Server (NTRS)

    Rothmayer, A. P.; Smith, F. T.

    1985-01-01

    An approach using a two-dimensional thin aerofoil, allied with the theory of viscous bluff-body separation, is used to study the initial cross-over from massive separation to an attached flow in a single-row unstaggered cascade. Analytic solutions are developed for the limit of small cascade-spacing. From the analytic solutions several interesting features of the cascade are examined, including multiple-solution branches and multiple regions of hysteresis. In addition, numerical results are presented for several selected aerofoils. Some of the aerofoils are found to contain markedly enlarged regions of hysteresis for certain critical cascade spacings.

  7. Survey of Tools for Risk Assessment of Cascading Outages

    SciTech Connect

    Papic, Milorad; Bell, Keith; Chen, Yousu; Dobson, Ian; Fonte, Louis; Haq, Enamul; Hines, Paul; Kirschen, Daniel; Luo, Xiaochuan; Miller, Stephen; Samaan, Nader A.; Vaiman, Marianna; Varghese, Matthew; Zhang, Pei

    2011-10-17

    Cascading failure can cause large blackouts, and a variety of methods are emerging to study this challenging topic. In parts 1 and 2 of this paper, the IEEE task force on cascading failure seeks to consolidate and review the progress of the field towards methods and tools of assessing the risk of cascading failure. Part 2 summarizes and discusses the state of the art in the available cascading failure modeling tools. The discussion integrates industry and research perspectives from a variety of institutions. Strengths, weaknesses, and gaps in current approaches are indicated.

  8. Langmuir Decay Instability Cascade in Laser-Plasma Experiments

    NASA Astrophysics Data System (ADS)

    Depierreux, S.; Labaune, C.; Fuchs, J.; Pesme, D.; Tikhonchuk, V. T.; Baldis, H. A.

    2002-07-01

    Thomson scattering has been used to investigate the nonlinear evolution of electron plasma waves (EPWs) generated by stimulated Raman scattering (SRS). Two complementary diagnostics demonstrate the occurrence of the cascade of Langmuir decay instabilities (LDI). The EPW wave-number spectrum displays an asymmetric broadening towards small wave numbers, interpreted as a signature of the secondary EPWs produced in the LDI cascade. The number of cascade steps is in agreement with the broadening of the associated ion-acoustic-waves' spectra. The total energy transferred in the EPWs cascade is found to be either less than or of the same order of magnitude as the energy of the primary EPW.

  9. Langmuir decay instability cascade in laser-plasma experiments.

    PubMed

    Depierreux, S; Labaune, C; Fuchs, J; Pesme, D; Tikhonchuk, V T; Baldis, H A

    2002-07-22

    Thomson scattering has been used to investigate the nonlinear evolution of electron plasma waves (EPWs) generated by stimulated Raman scattering (SRS). Two complementary diagnostics demonstrate the occurrence of the cascade of Langmuir decay instabilities (LDI). The EPW wave-number spectrum displays an asymmetric broadening towards small wave numbers, interpreted as a signature of the secondary EPWs produced in the LDI cascade. The number of cascade steps is in agreement with the broadening of the associated ion-acoustic-waves' spectra. The total energy transferred in the EPWs cascade is found to be either less than or of the same order of magnitude as the energy of the primary EPW.

  10. Microbial Diversity of Impact-Generated Habitats

    NASA Astrophysics Data System (ADS)

    Pontefract, Alexandra; Osinski, Gordon R.; Cockell, Charles S.; Southam, Gordon; McCausland, Phil J. A.; Umoh, Joseph; Holdsworth, David W.

    2016-10-01

    Impact-generated lithologies have recently been identified as viable and important microbial habitats, especially within cold and arid regions such as the polar deserts on Earth. These unique habitats provide protection from environmental stressors, such as freeze-thaw events, desiccation, and UV radiation, and act to trap aerially deposited detritus within the fissures and pore spaces, providing necessary nutrients for endoliths. This study provides the first culture-independent analysis of the microbial community structure within impact-generated lithologies in a Mars analog environment, involving the analysis of 44,534 16S rRNA sequences from an assemblage of 21 rock samples that comprises three shock metamorphism categories. We find that species diversity increases (H = 2.4-4.6) with exposure to higher shock pressures, which leads to the development of three distinct populations. In each population, Actinobacteria were the most abundant (41%, 65%, and 59%), and the dominant phototrophic taxa came from the Chloroflexi. Calculated porosity (a function of shock metamorphism) for these samples correlates (R2 = 0.62) with inverse Simpson indices, accounting for overlap in populations in the higher shock levels. The results of our study show that microbial diversity is tied to the amount of porosity in the target substrate (as a function of shock metamorphism), resulting in the formation of distinct microbial populations.

  11. High efficiency quantum cascade laser frequency comb

    PubMed Central

    Lu, Quanyong; Wu, Donghai; Slivken, Steven; Razeghi, Manijeh

    2017-01-01

    An efficient mid-infrared frequency comb source is of great interest to high speed, high resolution spectroscopy and metrology. Here we demonstrate a mid-IR quantum cascade laser frequency comb with a high power output and narrow beatnote linewidth at room temperature. The active region was designed with a strong-coupling between the injector and the upper lasing level for high internal quantum efficiency and a broadband gain. The group velocity dispersion was engineered for efficient, broadband mode-locking via four wave mixing. The comb device exhibits a narrow intermode beatnote linewidth of 50.5 Hz and a maximum wall-plug efficiency of 6.5% covering a spectral coverage of 110 cm−1 at λ ~ 8 μm. The efficiency is improved by a factor of 6 compared with previous demonstrations. The high power efficiency and narrow beatnote linewidth will greatly expand the applications of quantum cascade laser frequency combs including high-precision remote sensing and spectroscopy. PMID:28262834

  12. High efficiency quantum cascade laser frequency comb.

    PubMed

    Lu, Quanyong; Wu, Donghai; Slivken, Steven; Razeghi, Manijeh

    2017-03-06

    An efficient mid-infrared frequency comb source is of great interest to high speed, high resolution spectroscopy and metrology. Here we demonstrate a mid-IR quantum cascade laser frequency comb with a high power output and narrow beatnote linewidth at room temperature. The active region was designed with a strong-coupling between the injector and the upper lasing level for high internal quantum efficiency and a broadband gain. The group velocity dispersion was engineered for efficient, broadband mode-locking via four wave mixing. The comb device exhibits a narrow intermode beatnote linewidth of 50.5 Hz and a maximum wall-plug efficiency of 6.5% covering a spectral coverage of 110 cm(-1) at λ ~ 8 μm. The efficiency is improved by a factor of 6 compared with previous demonstrations. The high power efficiency and narrow beatnote linewidth will greatly expand the applications of quantum cascade laser frequency combs including high-precision remote sensing and spectroscopy.

  13. INVERSE CASCADE IN IMBALANCED ELECTRON MAGNETOHYDRODYNAMIC TURBULENCE

    SciTech Connect

    Kim, Hoonkyu; Cho, Jungyeon E-mail: jcho@cnu.ac.kr

    2015-03-10

    Electron magnetohydrodynamics (EMHD) provides a fluid-like description of small-scale magnetized plasmas. Balanced EMHD turbulence has been studied for a long time. However, driven imbalanced EMHD turbulence, in which waves moving in one direction (dominant waves) have higher amplitudes than waves moving in the other direction (sub-dominant waves), has not been well studied. In this paper, we numerically study driven three-dimensional imbalanced weak EMHD turbulence. We find the following results. First, in driven imbalanced EMHD turbulence, we clearly observe inverse cascade of magnetic helicity, as well as magnetic energy. This is because magnetic helicity is a conserved quantity and non-zero magnetic helicity is injected into the system in driven imbalanced EMHD turbulence. Second, the magnetic energy spectrum of the dominant waves on scales larger than the energy injection scale does not show a single power-law spectrum, which indicates that the inverse cascade is not a self-similar process. The peak of the spectrum roughly follows a k {sup –3/2} spectrum, which can be explained by a Kolmogorov-type argument for weak turbulence. Third, a small amount of sub-dominant waves is induced by the dominant waves on large scales and the ratio of helicity densities of the dominant and the sub-dominant waves on large scales seems to converge to a certain value.

  14. Cascade Distiller System Performance Testing Interim Results

    NASA Technical Reports Server (NTRS)

    Callahan, Michael R.; Pensinger, Stuart; Sargusingh, Miriam J.

    2014-01-01

    The Cascade Distillation System (CDS) is a rotary distillation system with potential for greater reliability and lower energy costs than existing distillation systems. Based upon the results of the 2009 distillation comparison test (DCT) and recommendations of the expert panel, the Advanced Exploration Systems (AES) Water Recovery Project (WRP) project advanced the technology by increasing reliability of the system through redesign of bearing assemblies and improved rotor dynamics. In addition, the project improved the CDS power efficiency by optimizing the thermoelectric heat pump (TeHP) and heat exchanger design. Testing at the NASA-JSC Advanced Exploration System Water Laboratory (AES Water Lab) using a prototype Cascade Distillation Subsystem (CDS) wastewater processor (Honeywell d International, Torrance, Calif.) with test support equipment and control system developed by Johnson Space Center was performed to evaluate performance of the system with the upgrades as compared to previous system performance. The system was challenged with Solution 1 from the NASA Exploration Life Support (ELS) distillation comparison testing performed in 2009. Solution 1 consisted of a mixed stream containing human-generated urine and humidity condensate. A secondary objective of this testing is to evaluate the performance of the CDS as compared to the state of the art Distillation Assembly (DA) used in the ISS Urine Processor Assembly (UPA). This was done by challenging the system with ISS analog waste streams. This paper details the results of the AES WRP CDS performance testing.

  15. Multistage WDM access architecture employing cascaded AWGs

    NASA Astrophysics Data System (ADS)

    El-Nahal, F. I.; Mears, R. J.

    2009-03-01

    Here we propose passive/active arrayed waveguide gratings (AWGs) with enhanced performance for system applications mainly in novel access architectures employing cascaded AWG technology. Two technologies were considered to achieve space wavelength switching in these networks. Firstly, a passive AWG with semiconductor optical amplifiers array, and secondly, an active AWG. Active AWG is an AWG with an array of phase modulators on its arrayed-waveguides section, where a programmable linear phase-profile or a phase hologram is applied across the arrayed-waveguide section. This results in a wavelength shift at the output section of the AWG. These architectures can address up to 6912 customers employing only 24 wavelengths, coarsely separated by 1.6 nm. Simulation results obtained here demonstrate that cascaded AWGs access architectures have a great potential in future local area networks. Furthermore, they indicate for the first time that active AWGs architectures are more efficient in routing signals to the destination optical network units than passive AWG architectures.

  16. Regimes of turbulence without an energy cascade

    NASA Astrophysics Data System (ADS)

    Barenghi, C. F.; Sergeev, Y. A.; Baggaley, A. W.

    2016-10-01

    Experiments and numerical simulations of turbulent 4He and 3He-B have established that, at hydrodynamic length scales larger than the average distance between quantum vortices, the energy spectrum obeys the same 5/3 Kolmogorov law which is observed in the homogeneous isotropic turbulence of ordinary fluids. The importance of the 5/3 law is that it points to the existence of a Richardson energy cascade from large eddies to small eddies. However, there is also evidence of quantum turbulent regimes without Kolmogorov scaling. This raises the important questions of why, in such regimes, the Kolmogorov spectrum fails to form, what is the physical nature of turbulence without energy cascade, and whether hydrodynamical models can account for the unusual behaviour of turbulent superfluid helium. In this work we describe simple physical mechanisms which prevent the formation of Kolmogorov scaling in the thermal counterflow, and analyze the conditions necessary for emergence of quasiclassical regime in quantum turbulence generated by injection of vortex rings at low temperatures. Our models justify the hydrodynamical description of quantum turbulence and shed light into an unexpected regime of vortex dynamics.

  17. High efficiency quantum cascade laser frequency comb

    NASA Astrophysics Data System (ADS)

    Lu, Quanyong; Wu, Donghai; Slivken, Steven; Razeghi, Manijeh

    2017-03-01

    An efficient mid-infrared frequency comb source is of great interest to high speed, high resolution spectroscopy and metrology. Here we demonstrate a mid-IR quantum cascade laser frequency comb with a high power output and narrow beatnote linewidth at room temperature. The active region was designed with a strong-coupling between the injector and the upper lasing level for high internal quantum efficiency and a broadband gain. The group velocity dispersion was engineered for efficient, broadband mode-locking via four wave mixing. The comb device exhibits a narrow intermode beatnote linewidth of 50.5 Hz and a maximum wall-plug efficiency of 6.5% covering a spectral coverage of 110 cm‑1 at λ ~ 8 μm. The efficiency is improved by a factor of 6 compared with previous demonstrations. The high power efficiency and narrow beatnote linewidth will greatly expand the applications of quantum cascade laser frequency combs including high-precision remote sensing and spectroscopy.

  18. Nonlinear modeling of thermoacoustically driven energy cascade

    NASA Astrophysics Data System (ADS)

    Gupta, Prateek; Scalo, Carlo; Lodato, Guido

    2016-11-01

    We present an investigation of nonlinear energy cascade in thermoacoustically driven high-amplitude oscillations, from the initial weakly nonlinear regime to the shock wave dominated limit cycle. We develop a first principle based quasi-1D model for nonlinear wave propagation in a canonical minimal unit thermoacoustic device inspired by the experimental setup of Biwa et al.. Retaining up to quadratic nonlinear terms in the governing equations, we develop model equations for nonlinear wave propagation in the proximity of differentially heated no-slip boundaries. Furthermore, we discard the effects of acoustic streaming in the present study and focus on nonlinear energy cascade due to high amplitude wave propagation. Our model correctly predicts the observed exponential growth of the thermoacoustically amplified second harmonic, as well as the energy transfer rate to higher harmonics causing wave steepening. Moreover, we note that nonlinear coupling of local pressure with heat transfer reduces thermoacoustic amplification gradually thus causing the system to reach limit cycle exhibiting shock waves. Throughout, we verify the results from the quasi-1D model with fully compressible Navier-Stokes simulations.

  19. Cascaded clocks measurement and simulation findings

    NASA Technical Reports Server (NTRS)

    Chislow, Don; Zampetti, George

    1994-01-01

    This paper will examine aspects related to network synchronization distribution and the cascading of timing elements. Methods of timing distribution have become a much debated topic in standards forums and among network service providers (both domestically and internationally). Essentially these concerns focus on the need to migrate their existing network synchronization plans (and capabilities) to those required for the next generation of transport technologies (namely, the Synchronous Digital Hierarchy (SDH), Synchronous Optical Networks (SONET), and Asynchronous Transfer Mode (ATM). The particular choices for synchronization distribution network architectures are now being evaluated and are demonstrating that they can indeed have a profound effect on the overall service performance levels that will be delivered to the customer. The salient aspects of these concerns reduce to the following: (1) identifying that the devil is in the details of the timing element specifications and the distribution of timing information (i.e., small design choices can have a large performance impact); (2) developing a standardized method of performance verification that will yield unambiguous results; and (3) presentation of those results. Specifically, this will be done for two general cases: an ideal input, and a noisy input to a cascaded chain of slave clocks.

  20. Kinase cascades regulating entry into apoptosis.

    PubMed Central

    Anderson, P

    1997-01-01

    All cells are constantly exposed to conflicting environment cues that signal cell survival or cell death. Survival signals are delivered by autocrine or paracrine factors that actively suppress a default death pathway. In addition to survival factor withdrawal, cell death can be triggered by environmental stresses such as heat, UV light, and hyperosmolarity or by dedicated death receptors (e.g., FAS/APO-1 and tumor necrosis factor [TNF] receptors) that are counterparts of growth factor or survival receptors at the cell surface. One of the ways that cells integrate conflicting exogenous stimuli is by phosphorylation (or dephosphorylation) of cellular constituents by interacting cascades of serine/threonine and tyrosine protein kinases (and phosphatases). Survival factors (e.g., growth factors and mitogens) activate receptor tyrosine kinases and selected mitogen-activated, cyclin-dependent, lipid-activated, nucleic acid-dependent, and cyclic AMP-dependent kinases to promote cell survival and proliferation, whereas environmental stress (or death factors such as FAS/APO-1 ligand and TNF-alpha) activates different members of these kinase families to inhibit cell growth and, under some circumstances, promote apoptotic cell death. Because individual kinase cascades can interact with one another, they are able to integrate conflicting exogenous stimuli and provide a link between cell surface receptors and the biochemical pathways leading to cell proliferation or cell death. PMID:9106363

  1. Regimes of turbulence without an energy cascade

    PubMed Central

    Barenghi, C. F.; Sergeev, Y. A.; Baggaley, A. W.

    2016-01-01

    Experiments and numerical simulations of turbulent 4He and 3He-B have established that, at hydrodynamic length scales larger than the average distance between quantum vortices, the energy spectrum obeys the same 5/3 Kolmogorov law which is observed in the homogeneous isotropic turbulence of ordinary fluids. The importance of the 5/3 law is that it points to the existence of a Richardson energy cascade from large eddies to small eddies. However, there is also evidence of quantum turbulent regimes without Kolmogorov scaling. This raises the important questions of why, in such regimes, the Kolmogorov spectrum fails to form, what is the physical nature of turbulence without energy cascade, and whether hydrodynamical models can account for the unusual behaviour of turbulent superfluid helium. In this work we describe simple physical mechanisms which prevent the formation of Kolmogorov scaling in the thermal counterflow, and analyze the conditions necessary for emergence of quasiclassical regime in quantum turbulence generated by injection of vortex rings at low temperatures. Our models justify the hydrodynamical description of quantum turbulence and shed light into an unexpected regime of vortex dynamics. PMID:27761005

  2. Frequency division using a micromechanical resonance cascade

    NASA Astrophysics Data System (ADS)

    Qalandar, K. R.; Strachan, B. S.; Gibson, B.; Sharma, M.; Ma, A.; Shaw, S. W.; Turner, K. L.

    2014-12-01

    A coupled micromechanical resonator array demonstrates a mechanical realization of multi-stage frequency division. The mechanical structure consists of a set of N sequentially perpendicular microbeams that are connected by relatively weak elastic elements such that the system vibration modes are localized to individual microbeams and have natural frequencies with ratios close to 1:2:⋯:2N. Conservative (passive) nonlinear inter-modal coupling provides the required energy transfer between modes and is achieved by finite deformation kinematics. When the highest frequency beam is excited, this arrangement promotes a cascade of subharmonic resonances that achieve frequency division of 2j at microbeam j for j = 1, …, N. Results are shown for a capacitively driven three-stage divider in which an input signal of 824 kHz is passively divided through three modal stages, producing signals at 412 kHz, 206 kHz, and 103 kHz. The system modes are characterized and used to delineate the range of AC input voltages and frequencies over which the cascade occurs. This narrow band frequency divider has simple design rules that are scalable to higher frequencies and can be extended to a larger number of modal stages.

  3. Cascade Processes and Fully Developed Turbulence.

    NASA Astrophysics Data System (ADS)

    Saucier, Antoine

    The energy cascade process in turbulent flows is studied. Kolmogorov inertial range theories are critically reviewed and the multifractal characterization is discussed. Multiplicative cascade models are compared to the energy dissipation field (EDF) measured in the atmosphere. Landau's objection to the 1941 Kolmogorov theory is extended to the predictions of statistical fluid mechanics. The hypothesis Delta v(lambda L) {buildrel {d}over=} lambda^ {1/3} Delta v(L) is rejected with a statistical test. The moments <( logvarepsilon(L))^{p}>, where varepsilon(L) denotes the EDF averaged over a volume of size L, are shown to be gaussian. For the EDF: Convergence tests showed that the exponents tau(q) were not reliable for q < 0; the correlations obey <(mu_{x}(delta)) ^{p}(mu_{x+delta }(delta))^{q}> ~ delta^{gamma(p,q)} but gamma does not always equal the value obtained with a multinomial measure; a privileged scale ration r ~ 1/2 is suggested by the prefactor oscillations of the correlation function. The implications of these results for the modelling of the EDF are discussed.

  4. Inverse Energy Cascades in Rotating Turbulence

    NASA Astrophysics Data System (ADS)

    Rosenberg, D. L.; Marino, R.; Mininni, P.; Pouquet, A.

    2013-12-01

    We present the results of direct numerical simulations (DNS) of rapidly rotating turbulent flows on grids of 20483 grid points that are forced at intermediate scales. Injection of energy at such scales at small Rossby numbers (~0.04) leads to a direct cascade toward small scales and an inverse cascade toward large scales. These results essentially validate those obtained using large eddy simulation (LES) (Sen et al., PRE 86:036319 (2012)): for a (helical) forcing that injects energy largely in 2D modes, the large scale energy spectrum scales as kperp-5/3, consistent with Kolmogorov-Kraichnan-Batchelor-Leith phenomenology; for a nonhelical isotropic forcing, the large scale energy spectrum scales as kperp-3. The (helical) anisotropic forcing DNS solution, like that of the LES models, shows a k-1 isotropic energy spectrum, which Sen et al. attribute to a large scale shear. The higher resolution of the DNS runs allows us to carry out probability distribution and conditional analyses that show that this interpretation may, in fact, be consistent with wall-bounded turbulent shear flow.

  5. Microbial Sulfur Cycling in an Acid Mine Lake

    NASA Astrophysics Data System (ADS)

    Bernier, L.; Warren, L. A.

    2004-12-01

    Geochemical dynamics of a tailings impacted lake in Northern Ontario were investigated over a three-year period, in which active pyrrhotite slurry disposal was initiated in year two. A strong seasonal trend of decreasing epilimnetic pH with significant diurnal acid production, pre-, during and post slurry deposition was observed with high rates observed compared to pre-slurry. Slurry deposition occurred at the surface of the lake and acted as a reaction stimulant for acid generation. Over the diurnal timescale investigated, the highest rates of acid production occurred not at the lake surface but within the metaliminetic region of the lake. This region was exemplified by strong decreasing oxygen gradients, and thus observed high rates of acid generation are more consistent with microbial pathways of sulfur oxidation than with abiotic, oxygen catalyzed pathways. Consistent with microbial catalysis, metalimnetic rates of acid generation were highest during June and July when microbial populations and metabolic rates were maximal. These results indicate that microbial oxidation of sulfur species play a major role in acid generation in this system. Further, observed rates of acid generation exceed those predicted by published abiotic rates of pyrrhotite oxidation, but are consistent with literature estimates of acid generation catalyzed by microbial activity. Acidithiobacilli accounted for up to 50% of the microbial community pre slurry, but were absent post slurry deposition. These results are the first to demonstrate quantitatively that microbial sulfur oxidation can play a predominant role in acid generation within mine tailings impacted systems. They further highlight the need to evaluate the more complex pathways by which microorganisms process sulfur as the conditions, controls and process rates differ from those observed for abiotic reactions.

  6. Quaternary Magmatism in the Cascades - Geologic Perspectives

    USGS Publications Warehouse

    Hildreth, Wes

    2007-01-01

    Foreward The Cascade magmatic arc is a belt of Quaternary volcanoes that extends 1,250 km from Lassen Peak in northern California to Meager Mountain in Canada, above the subduction zone where the Juan de Fuca Plate plunges beneath the North American Plate. This Professional Paper presents a synthesis of the entire volcanic arc, addressing all 2,300 known Quaternary volcanoes, not just the 30 or so visually prominent peaks that comprise the volcanic skyline. Study of Cascade volcanoes goes back to the geological explorers of the late 19th century and the seminal investigations of Howel Williams in the 1920s and 1930s. However, major progress and application of modern scientific methods and instrumentation began only in the 1970s with the advent of systematic geological, geophysical, and geochemical studies of the entire arc. Initial stimulus from the USGS Geothermal Research Program was enhanced by the USGS Volcano Hazards Program following the 1980 eruption of Mount St. Helens. Together, these two USGS Programs have provided more than three decades of stable funding, staffing, and analytical support. This Professional Paper summarizes the resultant USGS data sets and integrates them with the parallel contributions of other investigators. The product is based upon an all-encompassing and definitive geological database, including chemical and isotopic analyses to characterize the rocks and geochronology to provide the critical time constraints. Until now, this massive amount of data has not been summarized, and a systematic and uniform interpretation firmly grounded in geological fact has been lacking. Herein lies the primary utility of this Cascade volume. It not only will be the mandatory starting point for new workers, but also will provide essential geological context to broaden the perspectives of current investigators of specific Cascade volcanoes. Wes Hildreth's insightful understanding of volcanic processes and his uncompromising scientific integrity make him

  7. Microbial safety in space

    NASA Astrophysics Data System (ADS)

    Krooneman, Janneke; Harmsen, Hermie; Landini, Paolo; Zinn, Manfred; Munaut, Françoise; van der Meer, Walter; Beimfohr, Claudia; Reichert, Bas; Preuß, Andrea

    2005-10-01

    Microbial hygiene is important in our daily lives; preventing and combating microbial infections is increasingly important in society. In hospitals, strict monitoring and control is exercised for people and infrastructure alike. In modern buildings, air-conditioning system are screened for harmful bacteria such as Legionella. More recently, concerns about SARS (virus) and anthrax (bacteria) have added pressure on the scientific community to come up with adequate monitoring and control techniques to assure microbial hygiene. Additionally, the use of biotechnological recycling and cleaning processes for sustainability brings the need for reliable monitoring tools and preventive or riks-reducing strategies. In the manned space environment, similar problems need to be solved and efforts have already been made to study the behaviour of micro-organisms and microbial hygiene onboard space stations.

  8. Microbial Source Tracking

    EPA Science Inventory

    Bacterial indicators of fecal contamination provide the basis for assessing the microbial quality of environmental waters. While the indicator concept has overall helped reduce waterborne outbreaks in recreational waters, the public health value of currently used indicator bacter...

  9. The Orbis Cascade Merger and Its Impact on Patron-Initiated Borrowing

    ERIC Educational Resources Information Center

    Munson, Doris M.; Milton, Suzanne

    2009-01-01

    In 2000, Eastern Washington University became part of the Cascade Consortium and participated in consortial borrowing through the Cascade Union Catalog. In 2003, the Orbis and Cascade consortia merged into the Orbis Cascade Alliance, which manages the Summit Union Catalog. Since 2000, Cascade or Summit consortial borrowing has increased while…

  10. Sequencing Intractable DNA to Close Microbial Genomes

    SciTech Connect

    Hurt, Jr., Richard Ashley; Brown, Steven D; Podar, Mircea; Palumbo, Anthony Vito; Elias, Dwayne A

    2012-01-01

    Advancement in high throughput DNA sequencing technologies has supported a rapid proliferation of microbial genome sequencing projects, providing the genetic blueprint for for in-depth studies. Oftentimes, difficult to sequence regions in microbial genomes are ruled intractable resulting in a growing number of genomes with sequence gaps deposited in databases. A procedure was developed to sequence such difficult regions in the non-contiguous finished Desulfovibrio desulfuricans ND132 genome (6 intractable gaps) and the Desulfovibrio africanus genome (1 intractable gap). The polynucleotides surrounding each gap formed GC rich secondary structures making the regions refractory to amplification and sequencing. Strand-displacing DNA polymerases used in concert with a novel ramped PCR extension cycle supported amplification and closure of all gap regions in both genomes. These developed procedures support accurate gene annotation, and provide a step-wise method that reduces the effort required for genome finishing.

  11. Microbially induced corrosion of carbon steel in deep groundwater environment

    PubMed Central

    Rajala, Pauliina; Carpén, Leena; Vepsäläinen, Mikko; Raulio, Mari; Sohlberg, Elina; Bomberg, Malin

    2015-01-01

    The metallic low and intermediate level radioactive waste generally consists of carbon steel and stainless steels. The corrosion rate of carbon steel in deep groundwater is typically low, unless the water is very acidic or microbial activity in the environment is high. Therefore, the assessment of microbially induced corrosion of carbon steel in deep bedrock environment has become important for evaluating the safety of disposal of radioactive waste. Here we studied the corrosion inducing ability of indigenous microbial community from a deep bedrock aquifer. Carbon steel coupons were exposed to anoxic groundwater from repository site 100 m depth (Olkiluoto, Finland) for periods of 3 and 8 months. The experiments were conducted at both in situ temperature and room temperature to investigate the response of microbial population to elevated temperature. Our results demonstrate that microorganisms from the deep bedrock aquifer benefit from carbon steel introduced to the nutrient poor anoxic deep groundwater environment. In the groundwater incubated with carbon steel the planktonic microbial community was more diverse and 100-fold more abundant compared to the environment without carbon steel. The betaproteobacteria were the most dominant bacterial class in all samples where carbon steel was present, whereas in groundwater incubated without carbon steel the microbial community had clearly less diversity. Microorganisms induced pitting corrosion and were found to cluster inside the corrosion pits. Temperature had an effect on the species composition of microbial community and also affected the corrosion deposits layer formed on the surface of carbon steel. PMID:26257707

  12. Electrode assemblies composed of redox cascades from microbial respiratory electron transfer chains

    SciTech Connect

    Gates, Andrew J.; Marritt, Sophie; Bradley, Justin; Shi, Liang; McMillan, Duncan G.; Jeuken, Lars J.; Richardson, David; Butt, Julea N.

    2013-10-01

    Respiratory and photosynthetic electron transfer chains are dependent on vectorial electron transfer through a series of redox proteins. Examples include electron transfer from NapC to NapAB nitrate reductase in Paracoccus denitrificans and from CymA to Fcc3 (flavocytochrome c3) fumarate reductase in Shewanella oneidensis MR-1. In the present article, we demonstrate that graphite electrodes can serve as surfaces for the stepwise adsorption of NapC and NapAB, and the stepwise adsorption of CymA and Fcc3. Aspects of the catalytic properties of these assemblies are different from those of NapAB and Fcc3 adsorbed in isolation. We propose that this is due to the formation of NapC-NapAB and of CymA-Fcc3 complexes that are capable of supporting vectorial electron transfer.

  13. Seeking the northern boundary of the Cascade strawberry

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Fragaria cascadensis K.E. Hummer, an endemic decaploid strawberry species, was described from the Oregon Cascade Mountains in the Pacific North-western United States. Its range occurs near Mt. Hood, the highest peak in the northern Oregon Cascades, in a band of higher elevation sites southwards to n...

  14. RECONFIGURING POWER SYSTEMS TO MINIMIZE CASCADING FAILURES: MODELS AND ALGORITHMS

    SciTech Connect

    Bienstock, Daniel

    2014-04-11

    the main goal of this project was to develop new scientific tools, based on optimization techniques, with the purpose of controlling and modeling cascading failures of electrical power transmission systems. We have developed a high-quality tool for simulating cascading failures. The problem of how to control a cascade was addressed, with the aim of stopping the cascade with a minimum of load lost. Yet another aspect of cascade is the investigation of which events would trigger a cascade, or more appropriately the computation of the most harmful initiating event given some constraint on the severity of the event. One common feature of the cascade models described (indeed, of several of the cascade models found in the literature) is that we study thermally-induced line tripping. We have produced a study that accounts for exogenous randomness (e.g. wind and ambient temperature) that could affect the thermal behavior of a line, with a focus on controlling the power flow of the line while maintaining safe probability of line overload. This was done by means of a rigorous analysis of a stochastic version of the heat equation. we incorporated a model of randomness in the behavior of wind power output; again modeling an OPF-like problem that uses chance-constraints to maintain low probability of line overloads; this work has been continued so as to account for generator dynamics as well.

  15. 36 CFR 7.66 - North Cascades National Park.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... 36 Parks, Forests, and Public Property 1 2011-07-01 2011-07-01 false North Cascades National Park. 7.66 Section 7.66 Parks, Forests, and Public Property NATIONAL PARK SERVICE, DEPARTMENT OF THE INTERIOR SPECIAL REGULATIONS, AREAS OF THE NATIONAL PARK SYSTEM § 7.66 North Cascades National Park....

  16. 36 CFR 7.66 - North Cascades National Park.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... 36 Parks, Forests, and Public Property 1 2012-07-01 2012-07-01 false North Cascades National Park. 7.66 Section 7.66 Parks, Forests, and Public Property NATIONAL PARK SERVICE, DEPARTMENT OF THE INTERIOR SPECIAL REGULATIONS, AREAS OF THE NATIONAL PARK SYSTEM § 7.66 North Cascades National Park....

  17. 36 CFR 7.66 - North Cascades National Park.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... 36 Parks, Forests, and Public Property 1 2014-07-01 2014-07-01 false North Cascades National Park. 7.66 Section 7.66 Parks, Forests, and Public Property NATIONAL PARK SERVICE, DEPARTMENT OF THE INTERIOR SPECIAL REGULATIONS, AREAS OF THE NATIONAL PARK SYSTEM § 7.66 North Cascades National Park....

  18. 36 CFR 7.66 - North Cascades National Park.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 36 Parks, Forests, and Public Property 1 2010-07-01 2010-07-01 false North Cascades National Park. 7.66 Section 7.66 Parks, Forests, and Public Property NATIONAL PARK SERVICE, DEPARTMENT OF THE INTERIOR SPECIAL REGULATIONS, AREAS OF THE NATIONAL PARK SYSTEM § 7.66 North Cascades National Park....

  19. Cascades for hydrogen isotope separation using metal hydrides

    SciTech Connect

    Hill, F.B.; Grzetic, V.

    1982-01-01

    Designs are presented for continuous countercurrent hydrogen isotope separation cascades based on the use of metal hydrides. The cascades are made up of pressure swing adsorption (PSA) or temperature swing adsorption (TSA) stages. The designs were evolved from consideration of previously conducted studies of the separation performance of four types of PSA and TSA processes.

  20. Cascade vulnerability for risk analysis of water infrastructure.

    PubMed

    Sitzenfrei, R; Mair, M; Möderl, M; Rauch, W

    2011-01-01

    One of the major tasks in urban water management is failure-free operation for at least most of the time. Accordingly, the reliability of the network systems in urban water management has a crucial role. The failure of a component in these systems impacts potable water distribution and urban drainage. Therefore, water distribution and urban drainage systems are categorized as critical infrastructure. Vulnerability is the degree to which a system is likely to experience harm induced by perturbation or stress. However, for risk assessment, we usually assume that events and failures are singular and independent, i.e. several simultaneous events and cascading events are unconsidered. Although failures can be causally linked, a simultaneous consideration in risk analysis is hardly considered. To close this gap, this work introduces the term cascade vulnerability for water infrastructure. Cascade vulnerability accounts for cascading and simultaneous events. Following this definition, cascade risk maps are a merger of hazard and cascade vulnerability maps. In this work cascade vulnerability maps for water distribution systems and urban drainage systems based on the 'Achilles-Approach' are introduced and discussed. It is shown, that neglecting cascading effects results in significant underestimation of risk scenarios.

  1. Quantum cascade lasers with an integrated polarization mode converter.

    PubMed

    Dhirhe, D; Slight, T J; Holmes, B M; Hutchings, D C; Ironside, C N

    2012-11-05

    We discuss the design, fabrication and characterization of waveguide polarization mode converters for quantum cascade lasers operating at 4.6 μm. We have fabricated a quantum cascade laser with integrated polarization mode converter that emits light of 69% Transverse Electrical (TE) polarization from one facet and 100% Transverse Magnetic (TM) polarization from the other facet.

  2. 36 CFR 7.66 - North Cascades National Park.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... 36 Parks, Forests, and Public Property 1 2013-07-01 2013-07-01 false North Cascades National Park. 7.66 Section 7.66 Parks, Forests, and Public Property NATIONAL PARK SERVICE, DEPARTMENT OF THE INTERIOR SPECIAL REGULATIONS, AREAS OF THE NATIONAL PARK SYSTEM § 7.66 North Cascades National Park....

  3. Energy deposition calculated by PHITS code in Pb spallation target

    NASA Astrophysics Data System (ADS)

    Yu, Quanzhi

    2016-01-01

    Energy deposition in a Pb spallation target irradiated by high energetic protons was calculated by PHITS2.52 code. The validation of the energy deposition and neutron production calculated by PHITS code was performed. Results show good agreements between the simulation results and the experimental data. Detailed comparison shows that for the total energy deposition, PHITS simulation result was about 15% overestimation than that of the experimental data. For the energy deposition along the length of the Pb target, the discrepancy mainly presented at the front part of the Pb target. Calculation indicates that most of the energy deposition comes from the ionizations of the primary protons and the produced secondary particles. With the event generator mode of PHITS, the deposit energy distribution for the particles and the light nulclei is presented for the first time. It indicates that the primary protons with energy more than 100 MeV are the most contributors to the total energy deposition. The energy depositions peaking at 10 MeV and 0.1 MeV, are mainly caused by the electrons, pions, d, t, 3He and also α particles during the cascade process and the evaporation process, respectively. The energy deposition density caused by different proton beam profiles are also calculated and compared. Such calculation and analyses are much helpful for better understanding the physical mechanism of energy deposition in the spallation target, and greatly useful for the thermal hydraulic design of the spallation target.

  4. Microbial Biosignatures in High Iron Thermal Springs

    NASA Astrophysics Data System (ADS)

    Parenteau, M. N.; Embaye, T.; Jahnke, L. L.; Cady, S. L.

    2003-12-01

    . The mat also contained abundant n,n-wax esters of C32 to C37, characteristic of Chloroflexus. 10-Methyl-C16 was also detected, indicative of sulfate reducing bacteria (SRB). The narrow Oscillatoria mat was dominated by the aforementioned cyanobacterial biomarkers as well as iso-C17:1, a biomarker for some groups of SRB. Unusual dimethyl fatty acids were also detected. The goal of this research is to provide an initial dataset that will illustrate the maximum amount of paleobiological and paleoenvironmental information expected to form in these types of iron deposits. Insights from our research may help elucidate the role of phototrophs in the deposition of BIFs on Earth, and may assist in the search for evidence of fossilized microbial life in iron deposits on Mars. Pierson, B.K., M.N. Parenteau, and B.M. Griffin, Phototrophs in high-iron-concentration microbial mats: Ecology of phototrophs in an iron-depositing hot spring, Appl. Environ. Microbiol., 65, 5474-5483, 1999. Pierson, B.K., and M.N. Parenteau, Phototrophs in high iron microbial mats: Microstructure of mats in iron-depositing hot springs, FEMS Microbiology Ecology 32, 181-196, 2000. Trouwborst, R., G. Koch, G. Luther, and B.K. Pierson, Photosynthesis and iron in hot spring microbial mats (abstract), NAI General Meeting, Astrobiology 2(4), 206, 2003.

  5. Lung deposition of droplet aerosols in monkeys.

    PubMed

    Cheng, Y S; Irshad, H; Kuehl, P; Holmes, T D; Sherwood, R; Hobbs, C H

    2008-09-01

    Nonhuman primates are often the animal models of choice to study the infectivity and therapy of inhaled infectious agents. Most animal models for inhaled infectious diseases use aerosol/droplets generated by an atomization technique such as a Collison nebulizer that produces particles in the size range of 1 to 3 microm in diameter. There are few data in the literature on deposition patterns in monkeys. Our study was designed to measure the deposition pattern in monkeys using droplets having diameters of 2 and 5 microm using an exposure system designed to expose monkeys to aerosols of infectious agents. Six cynomolgus monkeys were exposed to droplets. The aerosol solution was generated from a Vero cell supernate containing DMEM + 10% fetal bovine serum tagged with Tc-99m radiolabel. Collison and Retec nebulizers were used to generate small and large droplets, respectively. The particle size (as determined from a cascade impactor) showed an activity median aerodynamic diameter (AMAD) of 2.3 and 5.1 microm for the Collison and Retec nebulizer, respectively. The animals were anesthetized, placed in a plethysmography box, and exposed to the aerosol. The deposition pattern was determined using a gamma camera. Deposition in the head airways was 39% and 58% for 2.3- and 5.1-microm particle aerosols, respectively, whereas the deposition in the deep lung was 12% and 8%, respectively. This information will be useful in developing animal models for inhaled infectious agents.

  6. Control of Cascaded Induction Generator Systems.

    DTIC Science & Technology

    1984-12-13

    itC itt N ’. . .3Z’ - - Zt it If - IA. 3 s - ~ J -~~~~ % 2. s 7a7. X- 0 -- -r u z A U. u 0 . * * c ~ ~ 4 -1 j L* _j *c AZOU + A , 4 .11* XX *- -1# X01X...34- . . . . . . . . SECURITY CLASSIFICATION OF THIS PAGE (, bateEntered). , REPORT DOCUMENTATION PAGE g~oREAD UIsDRucoI BEFORE COMPLETING FORM s -i’r 12 9 12 GVT ACCESSION...NO0 3. RECIPIENT’S CATALOG NME 4. TITLE (and Subtitle) S . TYPE OF REPORT & PERIOD COVERED 9/1/83 - 8/30/84 --. / Control of Cascaded Induction

  7. Atomistic Simulation of Collision Cascades in Zircon

    SciTech Connect

    Devanathan, Ram; Corrales, Louis R.; Weber, William J.; Chartier, Alain; Meis, Constantin

    2006-09-01

    Defect production in energetic collision cascades in zircon has been studied by molecular dynamics simulation using a partial charge model combined with the Ziegler-Biersack-Littmark potential. Energy dissipation, defect accumulation, Si-O-Si polymerization, and Zr coordination number were examined for 10 keV and 30 keV U recoils simulated in the constant NVE ensemble. For both energies an amorphous core was produced with features similar to that of melt quenched zircon. Disordered Si ions in this core were polymerized with an average degree of polymerization of 1.5, while disordered Zr ions showed a coordination number of about 6 in agreement with EXAFS results. These results suggest that nano-scale phase separation into silica- and zirconia-rich regions occurs in the amorphous core.

  8. Cascaded multiple classifiers for secondary structure prediction.

    PubMed Central

    Ouali, M.; King, R. D.

    2000-01-01

    We describe a new classifier for protein secondary structure prediction that is formed by cascading together different types of classifiers using neural networks and linear discrimination. The new classifier achieves an accuracy of 76.7% (assessed by a rigorous full Jack-knife procedure) on a new nonredundant dataset of 496 nonhomologous sequences (obtained from G.J. Barton and J.A. Cuff). This database was especially designed to train and test protein secondary structure prediction methods, and it uses a more stringent definition of homologous sequence than in previous studies. We show that it is possible to design classifiers that can highly discriminate the three classes (H, E, C) with an accuracy of up to 78% for beta-strands, using only a local window and resampling techniques. This indicates that the importance of long-range interactions for the prediction of beta-strands has been probably previously overestimated. PMID:10892809

  9. Mechanical gating of a mechanochemical reaction cascade

    NASA Astrophysics Data System (ADS)

    Wang, Junpeng; Kouznetsova, Tatiana B.; Boulatov, Roman; Craig, Stephen L.

    2016-11-01

    Covalent polymer mechanochemistry offers promising opportunities for the control and engineering of reactivity. To date, covalent mechanochemistry has largely been limited to individual reactions, but it also presents potential for intricate reaction systems and feedback loops. Here we report a molecular architecture, in which a cyclobutane mechanophore functions as a gate to regulate the activation of a second mechanophore, dichlorocyclopropane, resulting in a mechanochemical cascade reaction. Single-molecule force spectroscopy, pulsed ultrasonication experiments and DFT-level calculations support gating and indicate that extra force of >0.5 nN needs to be applied to a polymer of gated gDCC than of free gDCC for the mechanochemical isomerization gDCC to proceed at equal rate. The gating concept provides a mechanism by which to regulate stress-responsive behaviours, such as load-strengthening and mechanochromism, in future materials designs.

  10. Cascade Electronic Refrigerator Using Superconducting Tunnel Junctions

    NASA Astrophysics Data System (ADS)

    Nguyen, H. Q.; Peltonen, J. T.; Meschke, M.; Pekola, J. P.

    2016-11-01

    Microrefrigerators that operate in the subkelvin regime are key devices in quantum technology. A well-studied candidate, an electronic cooler using normal-metal-insulator-superconductor (N -I -S ) tunnel junctions, offers substantial performance and power. However, its superconducting electrodes are severely overheated due to exponential suppression of their thermal conductance towards low temperatures, and the cooler performs unsatisfactorily—especially in powerful devices needed for practical applications. We employ a second N -I -S cooling stage to thermalize the hot superconductor at the backside of the main N -I -S cooler. Not only providing a lower bath temperature, the second-stage cooler actively evacuates quasiparticles out of the hot superconductor, especially in the low-temperature limit. We demonstrate the apparent advantage of our approach. This cascade design can also be employed to manage excess heat in other cryoelectronic devices.

  11. Quantum cascade laser FM spectroscopy of explosives

    NASA Astrophysics Data System (ADS)

    Gutmann, Zach; Clasp, Trocia; Lue, Chris; Johnson, Tiffani; Ingle, Taylor; Jamison, Janet; Buchanan, Roger; Reeve, Scott

    2013-05-01

    Polyisobutylene is an industrial polymer that is widely used in a number of applications including the manufacture of military grade explosives. We have examined the vapor emanating from a series of different molecular weight samples of polyisobutylene using high resolution Quantum Cascade Laser FM spectroscopy. The vapor phase spectra all exhibit a rovibrational structure similar to that for the gas phase isobutylene molecule. We have assigned the structure in the 890 cm-1 and 1380 cm-1 regions to the isobutylene ν28 and ν7 fundamental bands respectively. These spectroscopic signatures may prove useful for infrared sensing applications. Here we will present the infrared signatures along with recent GCMS data from a sample of C4, utilizing solid-phase microextraction vapor collection fibers, which confirm the presence of isobutylene as one of the volatile bouquet species in RDX-based explosives.

  12. Cascade inertial-confinement-fusion power plant

    SciTech Connect

    Pitts, J.H.; Maya, I.

    1985-11-13

    The Cascade reactor is double-cone shaped with a maximum radius of 5 m. It rotates at 50 rpm. The average temperature of a three-material flowing granular blanket leaving the reactor is 1440 K. Heat from the blanket is transferred to helium gas in a shell- and ceramic-tube-type heat exchanger that has a separate region for each blanket material. Diffusion of tritium from the blanket granules through the heat exchanger is only 25 Ci/d, so no intermediate loop is needed for isolation. We selected a simple once-through, regenerative, 5-MPa helium gas-turbine (Brayton) cycle for power conversion because of its simplicity and high efficiency. Fusion power is 1500 MW; this is multiplied to 1670 MW/sub t/ in the blanket. Power conversion efficiency is 55%. Net electric power is 815 MW/sub e/, produced with a net plant efficiency of 49%.

  13. Cascading ecological effects of eliminating fishery discards

    PubMed Central

    Heath, Michael R.; Cook, Robin M.; Cameron, Angus I.; Morris, David J.; Speirs, Douglas C.

    2014-01-01

    Discarding by fisheries is perceived as contrary to responsible harvesting. Legislation seeking to end the practice is being introduced in many jurisdictions. However, discarded fish are food for a range of scavenging species; so, ending discarding may have ecological consequences. Here we investigate the sensitivity of ecological effects to discarding policies using an ecosystem model of the North Sea—a region where 30–40% of trawled fish catch is currently discarded. We show that landing the entire catch while fishing as usual has conservation penalties for seabirds, marine mammals and seabed fauna, and no benefit to fish stocks. However, combining landing obligations with changes in fishing practices to limit the capture of unwanted fish results in trophic cascades that can benefit birds, mammals and most fish stocks. Our results highlight the importance of considering the broader ecosystem consequences of fishery management policy, since species interactions may dissipate or negate intended benefits. PMID:24820200

  14. Electrical derivative measurement of quantum cascade lasers

    NASA Astrophysics Data System (ADS)

    Guo, Dingkai; Cheng, Liwei; Chen, Xing; Choa, Fow-Sen; Fan, Jenyu; Worchesky, Terry

    2011-02-01

    The electrical derivative characteristics of quantum cascade lasers (QCLs) are investigated to test the QCL threshold, leakage current, and possibly explore carrier transport. QCL thresholds can be identified by searching for the slope peak of the first derivative of the I-V curves and can be further confirmed with its alignment to the peak of the second derivative of the I-V curves. Leakage current in QCLs with oxide-blocked ridge waveguides and buried heterostructure (BH) waveguides are studied and compared. The oxide-blocking structures provide the lowest leakage current although the capped-mesa-BH (CMBH) QCLs provide the toughest durability under highly stressful operations. The leakage current of CMBH QCLs are also compared at different temperatures.

  15. Monolithic cascade-type solar cells

    NASA Technical Reports Server (NTRS)

    Yamamoto, S.; Shibukawa, A.; Yamaguchi, M.

    1985-01-01

    Solar cells consist of a semiconductor base, a bottom cell with a band-gap energy of E1, and a top cell with a band-gap energy of E2, and 0.96 E1 1.36 eV and (0.80 E + 0.77) eV E2 (0.80 E1 + 0.92) eV. A monolithic cascade-type solar cell was prepared with an n(+)-type GaAs base, a GaInAs bottom solar cell, and a GaAiInAs top solar cell. The surface of the cell is coated with a SiO antireflection film. The efficiency of the cell is 32%.

  16. Congestion and cascades in payment systems

    NASA Astrophysics Data System (ADS)

    Beyeler, Walter E.; Glass, Robert J.; Bech, Morten L.; Soramäki, Kimmo

    2007-10-01

    We develop a parsimonious model of the interbank payment system. The model incorporates an endogenous instruction arrival process, a scale-free topology of payments between banks, a fixed total liquidity which limits banks’ capacity to process arriving instructions, and a global market that distributes liquidity. We find that at low liquidity the system becomes congested and payment settlement loses correlation with payment instruction arrival, becoming coupled across the network. The onset of congestion is evidently related to the relative values of three characteristic times: the time for banks’ net position to return to 0, the time for a bank to exhaust its liquidity endowment, and the liquidity market relaxation time. In the congested regime settlement takes place in cascades having a characteristic length scale. A global liquidity market substantially attenuates congestion, requiring only a small fraction of the payment-induced liquidity flow to achieve strong beneficial effects.

  17. High brightness angled cavity quantum cascade lasers

    SciTech Connect

    Heydari, D.; Bai, Y.; Bandyopadhyay, N.; Slivken, S.; Razeghi, M.

    2015-03-02

    A quantum cascade laser (QCL) with an output power of 203 W is demonstrated in pulsed mode at 283 K with an angled cavity. The device has a ridge width of 300 μm, a cavity length of 5.8 mm, and a tilt angle of 12°. The back facet is high reflection coated, and the front facet is anti-reflection coated. The emitting wavelength is around 4.8 μm. In distinct contrast to a straight cavity broad area QCL, the lateral far field is single lobed with a divergence angle of only 3°. An ultrahigh brightness value of 156 MW cm{sup −2 }sr{sup −1} is obtained, which marks the brightest QCL to date.

  18. Novel trophic cascades: apex predators enable coexistence.

    PubMed

    Wallach, Arian D; Ripple, William J; Carroll, Scott P

    2015-03-01

    Novel assemblages of native and introduced species characterize a growing proportion of ecosystems worldwide. Some introduced species have contributed to extinctions, even extinction waves, spurring widespread efforts to eradicate or control them. We propose that trophic cascade theory offers insights into why introduced species sometimes become harmful, but in other cases stably coexist with natives and offer net benefits. Large predators commonly limit populations of potentially irruptive prey and mesopredators, both native and introduced. This top-down force influences a wide range of ecosystem processes that often enhance biodiversity. We argue that many species, regardless of their origin or priors, are allies for the retention and restoration of biodiversity in top-down regulated ecosystems.

  19. Hyperuniform disordered terahertz quantum cascade laser

    NASA Astrophysics Data System (ADS)

    Degl’Innocenti, R.; Shah, Y. D.; Masini, L.; Ronzani, A.; Pitanti, A.; Ren, Y.; Jessop, D. S.; Tredicucci, A.; Beere, H. E.; Ritchie, D. A.

    2016-01-01

    Laser cavities have been realized in various different photonic systems. One of the forefront research fields regards the investigation of the physics of amplifying random optical media. The random laser is a fascinating concept because, further to the fundamental research investigating light transport into complex media, it allows us to obtain non-conventional spectral distribution and angular beam emission patterns not achievable with conventional approaches. Even more intriguing is the possibility to engineer a priori the optical properties of a disordered distribution in an amplifying medium. We demonstrate here the realization of a terahertz quantum cascade laser in an isotropic hyperuniform disordered distribution exhibiting unique features, such as the presence of a photonic band gap, low threshold current density, unconventional angular emission and optical bistability.

  20. Exact coherent structures for the turbulent cascade

    NASA Astrophysics Data System (ADS)

    Eckhardt, Bruno; Zammert, Stefan

    2016-11-01

    The exact coherent structures that are connected with the transition to turbulence in interior flows usually extend across the full height of the domain. Using exact coherent states that are localized in the shear direction together with scaling ideas for the Navier-Stokes equation that combine length and Reynolds number, we show how such large scale structures can be morphed into smaller scale coherent structures. As the Reynolds number increases, more of these states with ever smaller scales appear, all the way down to the Kolmogorov scale. We present the structure and dynamical properties of several families of exact coherent solution in plane Couette flow, with different degrees of spatial localization: Some of them remain localized in the center and help to built the turbulence cascade, others are localized near the walls and contribute to shaping the boundary layer profile.

  1. Control of cascaded induction generator systems

    NASA Astrophysics Data System (ADS)

    Ortmeyer, T. H.

    1984-12-01

    This report documents an investigation of the stability and control of cascaded doubly fed machines (CDFM). These machines are brushless variable speed constant frequency electric power generators with potential for application in aircraft. A previous analytical study indicated the CDFM system would be controllable in the subsynchronous operating mode with a passive RL load. The present study contains two steps. First is an investigation of the machine operation in the supersynchronous mode. The second step is an investigation of machine operation with output capacitors providing excitation VARs for the machine and load. Step 1 results show that the machines exhibit stability characteristics in the supersynchronous mode similar to those observed in the subsynchronous mode. Step 2 results show that output capacitors degrade the system performance, particularly at light loads. The results show that output current feedback can be employed to improve the system performance.

  2. Mechanical gating of a mechanochemical reaction cascade

    PubMed Central

    Wang, Junpeng; Kouznetsova, Tatiana B.; Boulatov, Roman; Craig, Stephen L.

    2016-01-01

    Covalent polymer mechanochemistry offers promising opportunities for the control and engineering of reactivity. To date, covalent mechanochemistry has largely been limited to individual reactions, but it also presents potential for intricate reaction systems and feedback loops. Here we report a molecular architecture, in which a cyclobutane mechanophore functions as a gate to regulate the activation of a second mechanophore, dichlorocyclopropane, resulting in a mechanochemical cascade reaction. Single-molecule force spectroscopy, pulsed ultrasonication experiments and DFT-level calculations support gating and indicate that extra force of >0.5 nN needs to be applied to a polymer of gated gDCC than of free gDCC for the mechanochemical isomerization gDCC to proceed at equal rate. The gating concept provides a mechanism by which to regulate stress-responsive behaviours, such as load-strengthening and mechanochromism, in future materials designs. PMID:27848956

  3. Transonic turbine blade cascade testing facility

    NASA Technical Reports Server (NTRS)

    Verhoff, Vincent G.; Camperchioli, William P.; Lopez, Isaac

    1992-01-01

    NASA LeRC has designed and constructed a new state-of-the-art test facility. This facility, the Transonic Turbine Blade Cascade, is used to evaluate the aerodynamics and heat transfer characteristics of blade geometries for future turbine applications. The facility's capabilities make it unique: no other facility of its kind can combine the high degree of airflow turning, infinitely adjustable incidence angle, and high transonic flow rates. The facility air supply and exhaust pressures are controllable to 16.5 psia and 2 psia, respectively. The inlet air temperatures are at ambient conditions. The facility is equipped with a programmable logic controller with a capacity of 128 input/output channels. The data acquisition system is capable of scanning up to 1750 channels per sec. This paper discusses in detail the capabilities of the facility, overall facility design, instrumentation used in the facility, and the data acquisition system. Actual research data is not discussed.

  4. High brightness angled cavity quantum cascade lasers

    NASA Astrophysics Data System (ADS)

    Heydari, D.; Bai, Y.; Bandyopadhyay, N.; Slivken, S.; Razeghi, M.

    2015-03-01

    A quantum cascade laser (QCL) with an output power of 203 W is demonstrated in pulsed mode at 283 K with an angled cavity. The device has a ridge width of 300 μm, a cavity length of 5.8 mm, and a tilt angle of 12°. The back facet is high reflection coated, and the front facet is anti-reflection coated. The emitting wavelength is around 4.8 μm. In distinct contrast to a straight cavity broad area QCL, the lateral far field is single lobed with a divergence angle of only 3°. An ultrahigh brightness value of 156 MW cm-2 sr-1 is obtained, which marks the brightest QCL to date.

  5. Hyperuniform disordered terahertz quantum cascade laser

    PubMed Central

    Degl’Innocenti, R.; Shah, Y. D.; Masini, L.; Ronzani, A.; Pitanti, A.; Ren, Y.; Jessop, D. S.; Tredicucci, A.; Beere, H. E.; Ritchie, D. A.

    2016-01-01

    Laser cavities have been realized in various different photonic systems. One of the forefront research fields regards the investigation of the physics of amplifying random optical media. The random laser is a fascinating concept because, further to the fundamental research investigating light transport into complex media, it allows us to obtain non-conventional spectral distribution and angular beam emission patterns not achievable with conventional approaches. Even more intriguing is the possibility to engineer a priori the optical properties of a disordered distribution in an amplifying medium. We demonstrate here the realization of a terahertz quantum cascade laser in an isotropic hyperuniform disordered distribution exhibiting unique features, such as the presence of a photonic band gap, low threshold current density, unconventional angular emission and optical bistability. PMID:26758959

  6. A statistical analysis of mesoscale rainfall as a random cascade

    NASA Technical Reports Server (NTRS)

    Gupta, Vijay K.; Waymire, Edward C.

    1993-01-01

    The paper considers the random cascade theory for spatial rainfall. Particular attention was given to the following four areas: (1) the relationship of the random cascade theory of rainfall to the simple scaling and the hierarchical cluster-point-process theories, (2) the mathematical foundations for some of the formalisms commonly applied in the develpment of statistical cascade theory, (3) the empirical evidence for a random cascade theory of rainfall, and (4) the way of using data for making estimates of parameters and for making statistical inference within this theoretical framework. An analysis of space-time rainfall data is presented. Cascade simulations are carried out to provide a comparison with methods of analysis that are applied to the rainfall data.

  7. Geothermal segmentation of the Cascade Range in the USA

    USGS Publications Warehouse

    Guffanti, Marianne; Muffler, L.J.; Mariner, R.H.; Sherrod, D.R.; Smith, James G.; Blackwell, D.D.; Weaver, C.S.

    1990-01-01

    Characteristics of the crustal thermal regime of the Quaternary Cascades vary systematically along the range. Spatially congruent changes in volcanic vent distribution, volcanic extrusion rate, hydrothermal discharge rate, and regional conductive heat flow define 5 geothermal segments. These segments are, from north to south: (1) the Washington Cascades north of Mount Rainier, (2) the Cascades from Mount Rainier to Mount Hood, (3) the Oregon Cascades from south of Mount Hood to the California border, (4) northernmost California, including Mount Shasta and Medicine Lake volcano, and (5) the Lassen region of northern California. This segmentation indicates that geothermal resource potential is not uniform in the Cascade Range. Potential varies from high in parts of Oregon to low in Washington north of Mount Rainier.

  8. A modeling framework for system restoration from cascading failures.

    PubMed

    Liu, Chaoran; Li, Daqing; Zio, Enrico; Kang, Rui

    2014-01-01

    System restoration from cascading failures is an integral part of the overall defense against catastrophic breakdown in networked critical infrastructures. From the outbreak of cascading failures to the system complete breakdown, actions can be taken to prevent failure propagation through the entire network. While most analysis efforts have been carried out before or after cascading failures, restoration during cascading failures has been rarely studied. In this paper, we present a modeling framework to investigate the effects of in-process restoration, which depends strongly on the timing and strength of the restoration actions. Furthermore, in the model we also consider additional disturbances to the system due to restoration actions themselves. We demonstrate that the effect of restoration is also influenced by the combination of system loading level and restoration disturbance. Our modeling framework will help to provide insights on practical restoration from cascading failures and guide improvements of reliability and resilience of actual network systems.

  9. A Modeling Framework for System Restoration from Cascading Failures

    PubMed Central

    Liu, Chaoran; Li, Daqing; Zio, Enrico; Kang, Rui

    2014-01-01

    System restoration from cascading failures is an integral part of the overall defense against catastrophic breakdown in networked critical infrastructures. From the outbreak of cascading failures to the system complete breakdown, actions can be taken to prevent failure propagation through the entire network. While most analysis efforts have been carried out before or after cascading failures, restoration during cascading failures has been rarely studied. In this paper, we present a modeling framework to investigate the effects of in-process restoration, which depends strongly on the timing and strength of the restoration actions. Furthermore, in the model we also consider additional disturbances to the system due to restoration actions themselves. We demonstrate that the effect of restoration is also influenced by the combination of system loading level and restoration disturbance. Our modeling framework will help to provide insights on practical restoration from cascading failures and guide improvements of reliability and resilience of actual network systems. PMID:25474408

  10. Cascading Walks Model for Human Mobility Patterns

    PubMed Central

    Han, Xiao-Pu; Wang, Xiang-Wen; Yan, Xiao-Yong; Wang, Bing-Hong

    2015-01-01

    Background Uncovering the mechanism behind the scaling laws and series of anomalies in human trajectories is of fundamental significance in understanding many spatio-temporal phenomena. Recently, several models, e.g. the explorations-returns model (Song et al., 2010) and the radiation model for intercity travels (Simini et al., 2012), have been proposed to study the origin of these anomalies and the prediction of human movements. However, an agent-based model that could reproduce most of empirical observations without priori is still lacking. Methodology/Principal Findings In this paper, considering the empirical findings on the correlations of move-lengths and staying time in human trips, we propose a simple model which is mainly based on the cascading processes to capture the human mobility patterns. In this model, each long-range movement activates series of shorter movements that are organized by the law of localized explorations and preferential returns in prescribed region. Conclusions/Significance Based on the numerical simulations and analytical studies, we show more than five statistical characters that are well consistent with the empirical observations, including several types of scaling anomalies and the ultraslow diffusion properties, implying the cascading processes associated with the localized exploration and preferential returns are indeed a key in the understanding of human mobility activities. Moreover, the model shows both of the diverse individual mobility and aggregated scaling displacements, bridging the micro and macro patterns in human mobility. In summary, our model successfully explains most of empirical findings and provides deeper understandings on the emergence of human mobility patterns. PMID:25860140

  11. Orexin/hypocretin receptor signalling cascades.

    PubMed

    Kukkonen, J P; Leonard, C S

    2014-01-01

    Orexin (hypocretin) peptides and their two known G-protein-coupled receptors play essential roles in sleep-wake control and powerfully influence other systems regulating appetite/metabolism, stress and reward. Consequently, drugs that influence signalling by these receptors may provide novel therapeutic opportunities for treating sleep disorders, obesity and addiction. It is therefore critical to understand how these receptors operate, the nature of the signalling cascades they engage and their physiological targets. In this review, we evaluate what is currently known about orexin receptor signalling cascades, while a sister review (Leonard & Kukkonen, this issue) focuses on tissue-specific responses. The evidence suggests that orexin receptor signalling is multifaceted and is substantially more diverse than originally thought. Indeed, orexin receptors are able to couple to members of at least three G-protein families and possibly other proteins, through which they regulate non-selective cation channels, phospholipases, adenylyl cyclase, and protein and lipid kinases. In the central nervous system, orexin receptors produce neuroexcitation by postsynaptic depolarization via activation of non-selective cation channels, inhibition of K⁺ channels and activation of Na⁺/Ca²⁺ exchange, but they also can stimulate the release of neurotransmitters by presynaptic actions and modulate synaptic plasticity. Ca²⁺ signalling is also prominently influenced by these receptors, both via the classical phospholipase C-Ca²⁺ release pathway and via Ca²⁺ influx, mediated by several pathways. Upon longer-lasting stimulation, plastic effects are observed in some cell types, while others, especially cancer cells, are stimulated to die. Thus, orexin receptor signals appear highly tunable, depending on the milieu in which they are operating.

  12. Fluctuation sensitivity of a transcriptional signaling cascade

    NASA Astrophysics Data System (ADS)

    Pilkiewicz, Kevin R.; Mayo, Michael L.

    2016-09-01

    The internal biochemical state of a cell is regulated by a vast transcriptional network that kinetically correlates the concentrations of numerous proteins. Fluctuations in protein concentration that encode crucial information about this changing state must compete with fluctuations caused by the noisy cellular environment in order to successfully transmit information across the network. Oftentimes, one protein must regulate another through a sequence of intermediaries, and conventional wisdom, derived from the data processing inequality of information theory, leads us to expect that longer sequences should lose more information to noise. Using the metric of mutual information to characterize the fluctuation sensitivity of transcriptional signaling cascades, we find, counter to this expectation, that longer chains of regulatory interactions can instead lead to enhanced informational efficiency. We derive an analytic expression for the mutual information from a generalized chemical kinetics model that we reduce to simple, mass-action kinetics by linearizing for small fluctuations about the basal biological steady state, and we find that at long times this expression depends only on a simple ratio of protein production to destruction rates and the length of the cascade. We place bounds on the values of these parameters by requiring that the mutual information be at least one bit—otherwise, any received signal would be indistinguishable from noise—and we find not only that nature has devised a way to circumvent the data processing inequality, but that it must be circumvented to attain this one-bit threshold. We demonstrate how this result places informational and biochemical efficiency at odds with one another by correlating high transcription factor binding affinities with low informational output, and we conclude with an analysis of the validity of our assumptions and propose how they might be tested experimentally.

  13. Deep subsurface microbial processes

    USGS Publications Warehouse

    Lovley, D.R.; Chapelle, F.H.

    1995-01-01

    Information on the microbiology of the deep subsurface is necessary in order to understand the factors controlling the rate and extent of the microbially catalyzed redox reactions that influence the geophysical properties of these environments. Furthermore, there is an increasing threat that deep aquifers, an important drinking water resource, may be contaminated by man's activities, and there is a need to predict the extent to which microbial activity may remediate such contamination. Metabolically active microorganisms can be recovered from a diversity of deep subsurface environments. The available evidence suggests that these microorganisms are responsible for catalyzing the oxidation of organic matter coupled to a variety of electron acceptors just as microorganisms do in surface sediments, but at much slower rates. The technical difficulties in aseptically sampling deep subsurface sediments and the fact that microbial processes in laboratory incubations of deep subsurface material often do not mimic in situ processes frequently necessitate that microbial activity in the deep subsurface be inferred through nonmicrobiological analyses of ground water. These approaches include measurements of dissolved H2, which can predict the predominant microbially catalyzed redox reactions in aquifers, as well as geochemical and groundwater flow modeling, which can be used to estimate the rates of microbial processes. Microorganisms recovered from the deep subsurface have the potential to affect the fate of toxic organics and inorganic contaminants in groundwater. Microbial activity also greatly influences 1 the chemistry of many pristine groundwaters and contributes to such phenomena as porosity development in carbonate aquifers, accumulation of undesirably high concentrations of dissolved iron, and production of methane and hydrogen sulfide. Although the last decade has seen a dramatic increase in interest in deep subsurface microbiology, in comparison with the study of

  14. Cascade Reverse Osmosis Air Conditioning System: Cascade Reverse Osmosis and the Absorption Osmosis Cycle

    SciTech Connect

    2010-09-01

    BEETIT Project: Battelle is developing a new air conditioning system that uses a cascade reverse osmosis (RO)-based absorption cycle. Analyses show that this new cycle can be as much as 60% more efficient than vapor compression, which is used in 90% of air conditioners. Traditional vapor-compression systems use polluting liquids for a cooling effect. Absorption cycles use benign refrigerants such as water, which is absorbed in a salt solution and pumped as liquid—replacing compression of vapor. The refrigerant is subsequently separated from absorbing salt using heat for re-use in the cooling cycle. Battelle is replacing thermal separation of refrigerant with a more efficient reverse osmosis process. Research has shown that the cycle is possible, but further investment will be needed to reduce the number of cascade reverse osmosis stages and therefore cost.

  15. Microbial accumulation of uranium, radium, and cesium

    SciTech Connect

    Strandberg, G.W.; Shumate, S.E. II; Parrott, J.R. Jr.; North, S.E.

    1981-05-01

    Diverse microbial species varied considerably in their ability to accumulate uranium, cesium, and radium. Mechanistic differences in uranium uptake by Saccharomyces cerevisiae and Pseudomonas aeruginosa were indicated. S. serevisiae exhibited a slow (hours) surface accumulation of uranium which was subject to environmental factors, while P. aeruginosa accumulated uranium rapidly (minutes) as dense intracellular deposits and did not appear to be affected by environmental parameters. Metabolism was not required for uranium uptake by either organism. Cesium and radium were concentrated to a considerably lesser extent than uranium by the several species tested.

  16. Systematic two-dimensional cascade tests. Volume 4: Cascade test data

    NASA Technical Reports Server (NTRS)

    Murrin, T. A.; Taylor, W. E.

    1973-01-01

    The data pertaining to the performance characteristics of hydrofoils are presented. The hydrofoils are: (1) double circular arc, (2) multiple circular arc, and (3) slotted doubled circular arc. The experimental data are organized into a systematic presentation format and provided with scale factors and reference values for interpretation. The data include local pressure distributions upstream and downstream of the cascade test section, continuous records from flow angle and total pressure surveys, hydrofoil local pressure distributions, and cavitation data.

  17. Changes in microbial community characteristics and soil organic matter with nitrogen additions in two tropical forests

    SciTech Connect

    Cusack, Daniela F.; Silver, Whendee; Torn, Margaret S.; Burton, Sarah D.; Firestone, Mary

    2011-03-01

    Microbial communities and their associated enzyme activities affect the amount and chemical quality of carbon (C) in soils. Increasing nitrogen (N) deposition, particularly in N-rich tropical forests, is likely to change the composition and behavior of microbial communities and feed back on ecosystem structure and function. This study presents a novel assessment of mechanistic links between microbial responses to N deposition and shifts in soil organic matter (SOM) quality and quantity. We used phospholipid fatty acid (PLFA) analysis and microbial enzyme assays in soils to assess microbial community responses to long-term N additions in two distinct tropical rain forests. We used soil density fractionation and 13C nuclear magnetic resonance (NMR) spectroscopy to measure related changes in SOM pool sizes and chemical quality. Microbial biomass increased in response to N fertilization in both tropical forests and corresponded to declines in pools of low-density SOM. The chemical quality of this soil C pool reflected ecosystem-specific changes in microbial community composition. In the lower-elevation forest, there was an increase in gram-negative bacteria PLFA biomass, and there were significant losses of labile C chemical groups (O-alkyls). In contrast, the upper-elevation tropical forest had an increase in fungal PLFAs with N additions and declines in C groups associated with increased soil C storage (alkyls). The dynamics of microbial enzymatic activities with N addition provided a functional link between changes in microbial community structure and SOM chemistry. Ecosystem-specific changes in microbial community composition are likely to have far-reaching effects on soil carbon storage and cycling. This study indicates that microbial communities in N-rich tropical forests can be sensitive to added N, but we can expect significant variability in how ecosystem structure and function respond to N deposition among tropical forest types.

  18. Changes in microbial community characteristics and soil organic matter with nitrogen additions in two tropical forests.

    PubMed

    Cusack, Daniela F; Silver, Whendee L; Torn, Margaret S; Burton, Sarah D; Firestone, Mary K

    2011-03-01

    Microbial communities and their associated enzyme activities affect the amount and chemical quality of carbon (C) in soils. Increasing nitrogen (N) deposition, particularly in N-rich tropical forests, is likely to change the composition and behavior of microbial communities and feed back on ecosystem structure and function. This study presents a novel assessment of mechanistic links between microbial responses to N deposition and shifts in soil organic matter (SOM) quality and quantity. We used phospholipid fatty acid (PLFA) analysis and microbial enzyme assays in soils to assess microbial community responses to long-term N additions in two distinct tropical rain forests. We used soil density fractionation and 13C nuclear magnetic resonance (NMR) spectroscopy to measure related changes in SOM pool sizes and chemical quality. Microbial biomass increased in response to N fertilization in both tropical forests and corresponded to declines in pools of low-density SOM. The chemical quality of this soil C pool reflected ecosystem-specific changes in microbial community composition. In the lower-elevation forest, there was an increase in gram-negative bacteria PLFA biomass, and there were significant losses of labile C chemical groups (O-alkyls). In contrast, the upper-elevation tropical forest had an increase in fungal PLFAs with N additions and declines in C groups associated with increased soil C storage (alkyls). The dynamics of microbial enzymatic activities with N addition provided a functional link between changes in microbial community structure and SOM chemistry. Ecosystem-specific changes in microbial community composition are likely to have far-reaching effects on soil carbon storage and cycling. This study indicates that microbial communities in N-rich tropical forests can be sensitive to added N, but we can expect significant variability in how ecosystem structure and function respond to N deposition among tropical forest types.

  19. GaN-based terahertz quantum cascade lasers

    NASA Astrophysics Data System (ADS)

    Terashima, Wataru; Hirayama, Hideki

    2015-05-01

    III-nitride semiconductors having huge longitudinal optical phonon energies are promising as materials to solve a problem of "development of operational frequency range (5-12 THz)" on THz-QCLs. In this study, for the purpose of THz lasing from target subband levels, we designed unique quantum cascade (QC) structures whose active regions consisted of two quantum wells (QWs) for one period and the number of wave-functions contributed to lasing is limited to minimum 3 subband levels. (i.e., Pure 3-level laser system). We fabricated THz-QCLs with QC structures of a pure 3- level laser system (100-200 periods) through a radio-frequency molecular beam epitaxy (RF-MBE) and a metal organic chemical vapor deposition (MOCVD) on MOCVD-growth AlGaN/AlN templates grown on c-plane sapphire substrates. Clear satellite peaks in XRD analyses could be observed, indicating that layer structures were stacked with a good periodicity. By comparing data with simulation spectra, it was found that error of film thicknesses were 1-3 %. We observed sharp lasing spectra with peaks at frequencies of ~5.5 THz and ~7.0 THz whose full width at half maximum (FWHM) values were close to those of resolution of FTIR spectrometer, when we tried pulse current injection measurements into THz-QCL devices. We successfully for the first time realized GaN-based THz-QCL devices lasing at almost the same frequencies as the target ones by designing a 2QWs-type QC structure with a pure 3-level laser system. We also successfully achieved lasing at ~5.5 and ~7.0 THz, which are highest reported to date for any kinds of THz- QCLs.

  20. Unique pioneer microbial communities exposed to volcanic sulfur dioxide.

    PubMed

    Fujimura, Reiko; Kim, Seok-Won; Sato, Yoshinori; Oshima, Kenshiro; Hattori, Masahira; Kamijo, Takashi; Ohta, Hiroyuki

    2016-01-21

    Newly exposed volcanic substrates contain negligible amounts of organic materials. Heterotrophic organisms in newly formed ecosystems require bioavailable carbon and nitrogen that are provided from CO2 and N2 fixation by pioneer microbes. However, the knowledge of initial ecosystem developmental mechanisms, especially the association between microbial succession and environmental change, is still limited. This study reports the unique process of microbial succession in fresh basaltic ash, which was affected by long-term exposure to volcanic sulfur dioxide (SO2). Here we compared the microbial ecosystems among deposits affected by SO2 exposure at different levels. The results of metagenomic analysis suggested the importance of autotrophic iron-oxidizing bacteria, particularly those involved in CO2 and N2 fixation, in the heavily SO2 affected site. Changes in the chemical properties of the deposits after the decline of the SO2 impact led to an apparent decrease in the iron-oxidizer abundance and a possible shift in the microbial community structure. Furthermore, the community structure of the deposits that had experienced lower SO2 gas levels showed higher similarity with that of the control forest soil. Our results implied that the effect of SO2 exposure exerted a selective pressure on the pioneer community structure by changing the surrounding environment of the microbes.

  1. Unique pioneer microbial communities exposed to volcanic sulfur dioxide

    PubMed Central

    Fujimura, Reiko; Kim, Seok-Won; Sato, Yoshinori; Oshima, Kenshiro; Hattori, Masahira; Kamijo, Takashi; Ohta, Hiroyuki

    2016-01-01

    Newly exposed volcanic substrates contain negligible amounts of organic materials. Heterotrophic organisms in newly formed ecosystems require bioavailable carbon and nitrogen that are provided from CO2 and N2 fixation by pioneer microbes. However, the knowledge of initial ecosystem developmental mechanisms, especially the association between microbial succession and environmental change, is still limited. This study reports the unique process of microbial succession in fresh basaltic ash, which was affected by long-term exposure to volcanic sulfur dioxide (SO2). Here we compared the microbial ecosystems among deposits affected by SO2 exposure at different levels. The results of metagenomic analysis suggested the importance of autotrophic iron-oxidizing bacteria, particularly those involved in CO2 and N2 fixation, in the heavily SO2 affected site. Changes in the chemical properties of the deposits after the decline of the SO2 impact led to an apparent decrease in the iron-oxidizer abundance and a possible shift in the microbial community structure. Furthermore, the community structure of the deposits that had experienced lower SO2 gas levels showed higher similarity with that of the control forest soil. Our results implied that the effect of SO2 exposure exerted a selective pressure on the pioneer community structure by changing the surrounding environment of the microbes. PMID:26791101

  2. Unique pioneer microbial communities exposed to volcanic sulfur dioxide

    NASA Astrophysics Data System (ADS)

    Fujimura, Reiko; Kim, Seok-Won; Sato, Yoshinori; Oshima, Kenshiro; Hattori, Masahira; Kamijo, Takashi; Ohta, Hiroyuki

    2016-01-01

    Newly exposed volcanic substrates contain negligible amounts of organic materials. Heterotrophic organisms in newly formed ecosystems require bioavailable carbon and nitrogen that are provided from CO2 and N2 fixation by pioneer microbes. However, the knowledge of initial ecosystem developmental mechanisms, especially the association between microbial succession and environmental change, is still limited. This study reports the unique process of microbial succession in fresh basaltic ash, which was affected by long-term exposure to volcanic sulfur dioxide (SO2). Here we compared the microbial ecosystems among deposits affected by SO2 exposure at different levels. The results of metagenomic analysis suggested the importance of autotrophic iron-oxidizing bacteria, particularly those involved in CO2 and N2 fixation, in the heavily SO2 affected site. Changes in the chemical properties of the deposits after the decline of the SO2 impact led to an apparent decrease in the iron-oxidizer abundance and a possible shift in the microbial community structure. Furthermore, the community structure of the deposits that had experienced lower SO2 gas levels showed higher similarity with that of the control forest soil. Our results implied that the effect of SO2 exposure exerted a selective pressure on the pioneer community structure by changing the surrounding environment of the microbes.

  3. Granular Microbial Habitats Built from Iron Sulfides: Alternative Microbial Lifestyles?

    NASA Astrophysics Data System (ADS)

    Schieber, J.

    2005-03-01

    Concentrically zoned pyrite grains grew as granular microbial colonies. They stayed in the surface layer during long history of reworking and accretion and consist of marcasite and pyrite cortices with sulfide mineralized microbial remains.

  4. Tracing Hot-Spring Facies and thier Geothermally Silicified Microbial Textures into the Geologic Record: Relevance for Mars Biosignature Recognition

    NASA Astrophysics Data System (ADS)

    Campbell, K. A.; Guido, D. M.; Farmer, J. D.; Van Kranendonk, M. J.; Ruff, S. W.; Westall, F.

    2016-05-01

    Siliceous hot-spring deposits (sinters) in terrestrial volcanic terrains preserve robust microbial textures, owing to early mineralization, in the geologic record as far back as 3.48 billion years ago. Some resemble features at Columbia Hills.

  5. The Microbial Olympics

    PubMed Central

    Youle, Merry; Rohwer, Forest; Stacy, Apollo; Whiteley, Marvin; Steel, Bradley C.; Delalez, Nicolas J.; Nord, Ashley L.; Berry, Richard M.; Armitage, Judith P.; Kamoun, Sophien; Hogenhout, Saskia; Diggle, Stephen P.; Gurney, James; Pollitt, Eric J. G.; Boetius, Antje; Cary, S. Craig

    2014-01-01

    Every four years, the Olympic Games plays host to competitors who have built on their natural talent by training for many years to become the best in their chosen discipline. Similar spirit and endeavour can be found throughout the microbial world, in which every day is a competition to survive and thrive. Microorganisms are trained through evolution to become the fittest and the best adapted to a particular environmental niche or lifestyle, and to innovate when the ‘rules of the game’ are changed by alterations to their natural habitats. In this Essay, we honour the best competitors in the microbial world by inviting them to take part in the inaugural Microbial Olympics. PMID:22796885

  6. A thermal modelling of displacement cascades in uranium dioxide

    NASA Astrophysics Data System (ADS)

    Martin, G.; Garcia, P.; Sabathier, C.; Devynck, F.; Krack, M.; Maillard, S.

    2014-05-01

    The space and time dependent temperature distribution was studied in uranium dioxide during displacement cascades simulated by classical molecular dynamics (MD). The energy for each simulated radiation event ranged between 0.2 keV and 20 keV in cells at initial temperatures of 700 K or 1400 K. Spheres into which atomic velocities were rescaled (thermal spikes) have also been simulated by MD to simulate the thermal excitation induced by displacement cascades. Equipartition of energy was shown to occur in displacement cascades, half of the kinetic energy of the primary knock-on atom being converted after a few tenths of picoseconds into potential energy. The kinetic and potential parts of the system energy are however subjected to little variations during dedicated thermal spike simulations. This is probably due to the velocity rescaling process, which impacts a large number of atoms in this case and would drive the system away from a dynamical equilibrium. This result makes questionable MD simulations of thermal spikes carried out up to now (early 2014). The thermal history of cascades was compared to the heat equation solution of a punctual thermal excitation in UO2. The maximum volume brought to a temperature above the melting temperature during the simulated cascade events is well reproduced by this simple model. This volume eventually constitutes a relevant estimate of the volume affected by a displacement cascade in UO2. This definition of the cascade volume could also make sense in other materials, like iron.

  7. Out of control: Fluctuation of cascading dynamics in networks

    NASA Astrophysics Data System (ADS)

    Wang, Jianwei; Cai, Lin; Xu, Bo; Li, Peng; Sun, Enhui; Zhu, Zhiguo

    2016-11-01

    Applying two preferential selection mechanisms of flow destination, we develop two new methods to quantify the initial load of a node, where the flow is transported along the shortest path between two nodes. We propose a simple cascading model and study cascading dynamics induced by attacking the node with the highest load in some synthetic and actual networks. Surprisingly, we observe the abnormal fluctuation of cascading dynamics, i.e., more damage can be triggered if we spend significantly higher cost to protect a network. In particular, this phenomenon is independent of the initial flow distribution and the preferential selection mechanisms of flow destination. However, it remains unclear which specific structural patterns may affect the fluctuation of cascading dynamics. In this paper, we examine the local evolution of the cascading propagation by constructing some special networks. We show that revivals of some nodes in the double ring structure facilitate the transportation of the flow between two unconnected sub-networks, cause more damage and subsequently lead to the abnormal fluctuation of cascading dynamics. Compared with the traditional definition of the betweenness, we adopt two new proposed methods to further evaluate the resilience of several actual networks. We find that some real world networks reach the strongest resilience level against cascading failures in our preferential selection mechanisms of flow destination. Moreover, we explore how to use the minimum cost to maximize the resilience of the studied networks.

  8. Risk Assessment of Cascading Outages: Methodologies and Challenges

    SciTech Connect

    Vaiman, Marianna; Bell, Keith; Chen, Yousu; Chowdhury, Badrul; Dobson, Ian; Hines, Paul; Papic, Milorad; Miller, Stephen; Zhang, Pei

    2012-05-31

    Abstract- This paper is a result of ongoing activity carried out by Understanding, Prediction, Mitigation and Restoration of Cascading Failures Task Force under IEEE Computer Analytical Methods Subcommittee (CAMS). The task force's previous papers are focused on general aspects of cascading outages such as understanding, prediction, prevention and restoration from cascading failures. This is the first of two new papers, which extend this previous work to summarize the state of the art in cascading failure risk analysis methodologies and modeling tools. This paper is intended to be a reference document to summarize the state of the art in the methodologies for performing risk assessment of cascading outages caused by some initiating event(s). A risk assessment should cover the entire potential chain of cascades starting with the initiating event(s) and ending with some final condition(s). However, this is a difficult task and heuristic approaches and approximations have been suggested. This paper discusses different approaches to this and suggests directions for future development of methodologies. The second paper summarizes the state of the art in modeling tools for risk assessment of cascading outages.

  9. Factors Associated with PMTCT Cascade Completion in Four African Countries

    PubMed Central

    Welty, Thomas K.; Westfall, Andrew O.; Chi, Benjamin H.; Ekouevi, Didier Koumavi; Tih, Pius M.; Tita, Alan T. N.

    2016-01-01

    Background. Many countries are working to reduce or eliminate mother-to-child transmission (MTCT) of HIV. Prevention efforts have been conceptualized as steps in a cascade but cascade completion rates during and after pregnancy are low. Methods. A cross-sectional survey was performed across 26 communities in Cameroon, Cote d'Ivoire, South Africa, and Zambia. Women who reported a pregnancy within two years were enrolled. Participant responses were used to construct the PMTCT cascade with all of the following steps required for completion: at least one antenatal visit, HIV testing performed, HIV testing result received, initiation of maternal prophylaxis, and initiation of infant prophylaxis. Factors associated with cascade completion were identified using multivariable logistic regression modeling. Results. Of 976 HIV-infected women, only 355 (36.4%) completed the PMTCT cascade. Although most women (69.2%) did not know their partner's HIV status; awareness of partner HIV status was associated with cascade completion (aOR 1.4, 95% CI 1.01–2.0). Completion was also associated with receiving an HIV diagnosis prior to pregnancy compared with HIV diagnosis during or after pregnancy (aOR 14.1, 95% CI 5.2–38.6). Conclusions. Pregnant women with HIV infection in Africa who were aware of their partner's HIV status and who were diagnosed with HIV before pregnancy were more likely to complete the PMTCT cascade. PMID:27872760

  10. Microbial Load Monitor

    NASA Technical Reports Server (NTRS)

    Gibson, S. F.; Royer, E. R.

    1979-01-01

    The Microbial Load Monitor (MLM) is an automated and computerized system for detection and identification of microorganisms. Additionally, the system is designed to enumerate and provide antimicrobic susceptibility profiles for medically significant bacteria. The system is designed to accomplish these tasks in a time of 13 hours or less versus the traditional time of 24 hours for negatives and 72 hours or more for positives usually required for standard microbiological analysis. The MLM concept differs from other methods of microbial detection in that the system is designed to accept raw untreated clinical samples and to selectively identify each group or species that may be present in a polymicrobic sample.

  11. Flow-banded Rhyolite of the Northern Oregon Cascades: Graveyard and Gordon Buttes, Tygh Valley, Oregon

    NASA Astrophysics Data System (ADS)

    Westby, E.; Streck, M. J.

    2013-12-01

    One of the most structurally complex areas along the northeastern margin of the Oregon Cascades is in Tygh Valley. Crustal shortening produced folds and extensional tectonics resulted in rifting during the Miocene/Pliocene. Rhyolite, exposed in channel cuts and river canyon, records this transition, summarized in new, more detailed research. Tygh Valley, Oregon, is a synclinal basin bordered by the Tygh Ridge anticline to the north, Mutton Mountains to the south, and the Cascade Range (with Mt. Hood) to the west. The stratigraphy of the basin consists of epi- and volcaniclastic deposits mostly derived from the Cascades Range, in addition to ash flow tuffs and surficial basalt lava flows. Rhyolite lava flows are found at two dome complexes in the Tygh Valley area, Graveyard Butte and Gordon Butte. At Graveyard Butte, the White River has cut a winding canyon 140 meters deep, exposing at its base, a 40-meter thick outcrop of flow-banded rhyolite (73 wt.% SiO2) that laterally extends along the canyon walls for about 1 km. Stratigraphically above the flow-banded rhyolites are locally-erupted Fe-rich andesites (lava flows, agglutinate and other pyroclastic rocks as well as clastic debris), a rhyolitic ash-flow tuff (74 wt.% SiO2) and the 2.7 My basalt lava flows of Juniper Flat. At Gordon Butte, compositionally similar rhyolite lavas are exposed in channel cuts but flows are less constrained on ridge tops due to heavy vegetation. Ongoing age dating experiments will likely reveal a late Miocene/Pliocene age for these rhyolite lava flows. The rhyolite lavas flows at both buttes are chemically nearly indistinguishable but contrast with the stratigraphically younger rhyolitic ash-flow tuff at Graveyard Butte. Rhyolite lavas are richer in Nb and Zr than the younger rhyolitic tuff (Nb 30-40 versus 13 ppm; Zr 490 versus 240 ppm) and share characteristics with much older (~30 Ma) rhyolites of the Western Cascades and John Day Formation of central and eastern Oregon as well as

  12. Microbial Control News - November 2011

    Technology Transfer Automated Retrieval System (TEKTRAN)

    This is the first of a column in the Society for Invertebrate Pathology Newsletter. Entitled "Microbial Control News" this article summarizes regulatory actions in the U.S. and Canada regarding microbial insect pest control agents....

  13. Enzyme-Cascade Analysis of the Rio Tinto Subsurface Environment: A Biosensor Experiment

    NASA Technical Reports Server (NTRS)

    McKay, David S.; Lynch, Kennda; Wainwright, Norman; Child, Alice; Williams, Kendra; McKay, David; Amils, Ricardo; Gonzalez, Elena; Stoker, Carol

    2004-01-01

    The Portable Test System (PTS), designed & developed by Charles Rivers Laboratories, Inc. (Charleston, SC) is a portable instrument that was designed to perform analysis of enzymatic assays related to rapid assessment of microbial contamination (Wainwright, 2003). The enzymatic cascade of Limulus Amebocyte Lysate (LAL) is known to be one of the most sensitive techniques available for microbial detection, enabling the PTS to be evaluated as a potential life detection instrument for in situ Astrobiology missions. In the summer of 2003 the system was tested as a part of the Mars Astrobiology Research and Technology Experiment (MARTE) ground truth science campaign in the Rio Tinto Analogue environment near Nerva, Spain. The preliminary results show that the PTS analysis correlates well with the contamination control tests and the more traditional lab-based biological assays performed during the MARTE field mission. Further work will be conducted on this research during a second field campaign in 2004 and a technology demonstration of a prototype instrument that includes autonomous sample preparation will occur in 2005.

  14. Active control of light based on polarization-coupling cascading

    NASA Astrophysics Data System (ADS)

    Huo, Juan; Zheng, Yuanlin; Chen, Xianfeng

    2014-10-01

    In this letter, we proposed a novel method for optical manipulation based on polarization-coupling cascading in MgO-doped periodically poled lithium niobate crystal. Polarization-coupling cascading, a series of energy exchanges between two orthogonally polarized beams close to phase matching condition, can also lead to phase shifts, in analogy with that in cascaded second-order nonlinearities. In addition, the parameters of light such as phase, amplitude, and group velocity can be modulated by changing the relative power ratio of the incident continuous wave beams. The phase control was demonstrated by Newton's rings experiment, which was in good agreement with the theoretical prediction.

  15. Cascade generalized predictive control strategy for boiler drum level.

    PubMed

    Xu, Min; Li, Shaoyuan; Cai, Wenjian

    2005-07-01

    This paper proposes a cascade model predictive control scheme for boiler drum level control. By employing generalized predictive control structures for both inner and outer loops, measured and unmeasured disturbances can be effectively rejected, and drum level at constant load is maintained. In addition, nonminimum phase characteristic and system constraints in both loops can be handled effectively by generalized predictive control algorithms. Simulation results are provided to show that cascade generalized predictive control results in better performance than that of well tuned cascade proportional integral differential controllers. The algorithm has also been implemented to control a 75-MW boiler plant, and the results show an improvement over conventional control schemes.

  16. Optimization of Quantum Correlation in Cascaded Four-Wave Mixing

    NASA Astrophysics Data System (ADS)

    Feng, Jingliang; Jing, Jietai

    2016-12-01

    We propose a measurement strategy that can be used to optimize quantum correlation for a cascaded four-wave mixing (FWM) structure. By calculating the covariance matrix of a cascaded FWM structure, we can get all the correlations between any two parties in the outputs. We then calculate the eigenvalues and corresponding eigenmodes of the covariance matrix to find the squeezing degrees of the squeezed modes. Our theoretical model can explain our previous experimental results very well and is useful to optimize the squeezing degree in the cascaded FWM structure.

  17. Optimization of Quantum Correlation in Cascaded Four-Wave Mixing

    NASA Astrophysics Data System (ADS)

    Feng, Jingliang; Jing, Jietai

    2017-03-01

    We propose a measurement strategy that can be used to optimize quantum correlation for a cascaded four-wave mixing (FWM) structure. By calculating the covariance matrix of a cascaded FWM structure, we can get all the correlations between any two parties in the outputs. We then calculate the eigenvalues and corresponding eigenmodes of the covariance matrix to find the squeezing degrees of the squeezed modes. Our theoretical model can explain our previous experimental results very well and is useful to optimize the squeezing degree in the cascaded FWM structure.

  18. Self-organization, the cascade model, and natural hazards

    PubMed Central

    Turcotte, Donald L.; Malamud, Bruce D.; Guzzetti, Fausto; Reichenbach, Paola

    2002-01-01

    We consider the frequency-size statistics of two natural hazards, forest fires and landslides. Both appear to satisfy power-law (fractal) distributions to a good approximation under a wide variety of conditions. Two simple cellular-automata models have been proposed as analogs for this observed behavior, the forest fire model for forest fires and the sand pile model for landslides. The behavior of these models can be understood in terms of a self-similar inverse cascade. For the forest fire model the cascade consists of the coalescence of clusters of trees; for the sand pile model the cascade consists of the coalescence of metastable regions. PMID:11875206

  19. Probabilistic analysis of cascade failure dynamics in complex network

    NASA Astrophysics Data System (ADS)

    Zhang, Ding-Xue; Zhao, Dan; Guan, Zhi-Hong; Wu, Yonghong; Chi, Ming; Zheng, Gui-Lin

    2016-11-01

    The impact of initial load and tolerance parameter distribution on cascade failure is investigated. By using mean field theory, a probabilistic cascade failure model is established. Based on the model, the damage caused by certain attack size can be predicted, and the critical attack size is derived by the condition of cascade failure end, which ensures no collapse. The critical attack size is larger than the case of constant tolerance parameter for network of random distribution. Comparing three typical distributions, simulation results indicate that the network whose initial load and tolerance parameter both follow Weibull distribution performs better than others.

  20. Redundancy in information transmission in a two-step cascade

    NASA Astrophysics Data System (ADS)

    Biswas, Ayan; Banik, Suman K.

    2016-05-01

    We present a stochastic framework to study signal transmission in a generic two-step cascade S→X→Y . Starting from a set of Langevin equations obeying Gaussian noise processes we calculate the variance and covariance while considering both linear and nonlinear production terms for different biochemical species of the cascade. These quantities are then used to calculate the net synergy within the purview of partial information decomposition. We show that redundancy in information transmission is essentially an important consequence of Markovian property of the two-step cascade motif. We also show that redundancy increases fidelity of the signaling pathway.

  1. Flutter Analysis of Annular Cascades in Counter Rotation

    NASA Astrophysics Data System (ADS)

    Nishino, Ryohei; Namba, Masanobu

    The paper studies the effect of neighboring blade rows on flutter characteristics of cascading blades. For this purpose the computation program to calculate the unsteady blade loading based on the unsteady lifting surface theory for contra-rotating annular cascades was formulated and coded. Then a computation program to solve the coupled bending-torsion flutter equation for the contra-rotating annular cascades was also developed. Some results of the flutter analysis are presented. The presence of the neighboring blade row gives rise to significant change in the critical flutter condition when the main acoustic duct mode is of cut-on state.

  2. Crossover from localized to cascade relaxations in metallic glasses

    SciTech Connect

    Fan, Yue; Iwashita, Takuya; Egami, Takeshi

    2015-07-21

    Thermally activated deformation is investigated in two metallic glass systems with different cooling histories. By probing the atomic displacements and stress changes on the potential energy landscape, two deformation modes, a localized process and cascade process, have observed. The localized deformation involves fewer than 30 atoms and appears in both systems, and its size is invariant with cooling history. However, the cascade deformation is more frequently observed in the fast quenched system than in the slowly quenched system. As a result, the origin of the cascade process in the fast quenched system is attributed to the higher density of local minima on the underlying potential energy landscape.

  3. Crossover from Localized to Cascade Relaxations in Metallic Glasses

    NASA Astrophysics Data System (ADS)

    Fan, Yue; Iwashita, Takuya; Egami, Takeshi

    2015-07-01

    Thermally activated deformation is investigated in two metallic glass systems with different cooling histories. By probing the atomic displacements and stress changes on the potential energy landscape, two deformation modes, a localized process and cascade process, have observed. The localized deformation involves fewer than 30 atoms and appears in both systems, and its size is invariant with cooling history. However, the cascade deformation is more frequently observed in the fast quenched system than in the slowly quenched system. The origin of the cascade process in the fast quenched system is attributed to the higher density of local minima on the underlying potential energy landscape.

  4. Cascade focusing in the beat-wave accelerator

    SciTech Connect

    Gibbon, P.; Bell, A.R.

    1988-10-03

    The 2D wave-envelope equationf for the beat-wave--cascade system are studied analytically and numerically. An expression for the mean square width of the cascade envelope is obtained, and is used to predict the long-term behavior of the waves. The amplitude or a resonantly driven plasma wave falls significantly over a stage length due to enhanced diffraction of the cascade envelope. Conversely, detuning the pumps from the plasma frequency can lead to focusing of the envelope and a corresponding increase in plasmon amplitude of up to 200% over the same distance.

  5. Design of transonic compressor cascades using hodograph method

    NASA Technical Reports Server (NTRS)

    Chen, Zuoyi; Guo, Jingrong

    1991-01-01

    The use of the Hodograph Method in the design of a transonic compressor cascade is discussed. The design of the flow mode in the transonic compressor cascade must be as follows: the flow in the nozzle part should be uniform and smooth; the location of the sonic line should be reasonable; and the aerodynamic character of the flow canal in the subsonic region should be met. The rate through cascade may be determined by the velocity distribution in the subsonic region (i.e., by the numerical solution of the Chaplygin equation). The supersonic sections A'C' and AD are determined by the analytical solution of the Mixed-Type Hodograph equation.

  6. Recent Advances in Microbial Electrocatalysis

    DTIC Science & Technology

    2014-01-01

    Microbial electrocatalysis is a relatively new field of research in which the intrinsic metabolic capacities of various microbes are coupled with...inorganic electrodes to carryout interesting chemical conversions. Given the great diversity in microbial metabolic pathways, a wide variety of processes...past decade. A relatively new development is electrosynthesis, the electrically driven fixation of CO2 into various chemicals. Moreover, microbial

  7. Cascades Ecoregion: Chapter 11 in Status and trends of land change in the Western United States--1973 to 2000

    USGS Publications Warehouse

    Sorenson, Daniel G.

    2012-01-01

    The Cascades Ecoregion (Omernik, 1987; U.S. Environmental Protection Agency, 1997) covers approximately 46,787 km2 (18,064 mi2) in Washington, Oregon, and California (fig. 1). The main body of the ecoregion extends from Snoqualmie Pass, Washington, in the north, to Hayden Mountain, near State Highway 66 in southern Oregon. Also included in the ecoregion is a small isolated section south of Bend, Oregon, as well as a larger one around Mount Shasta, California. The ecoregion is bounded on the west by the Klamath Mountains, Willamette Valley, and Puget Lowland Ecoregions; on the north by the North Cascades Ecoregion; and on the east by the Eastern Cascades Slopes and Foothills Ecoregion. The Cascades Ecoregion is a forested, mountainous ecoregion, and it contains a large amount of Cenozoic volcanic rock and many active and inactive volcanoes, especially in the east (McNab and Avers, 1994). Elevations range from near sea level at the Columbia River to 4,390 m at Mount Rainier in Washington, with most of the ecoregion between 645 and 2,258 m. The west side of the ecoregion is characterized by long, steep ridges and wide river valleys. Subalpine meadows are present at higher elevations, and alpine glaciers have left till and outwash deposits (McNab and Avers, 1994). Precipitation in the Cascades Ecoregion ranges from 1,300 to 3,800 mm, falling mostly as rain and snow from October to June. Average annual temperatures range from –1ºC to 11ºC. The length of the growing season varies from less than 30 days to 240 days (McNab and Avers, 1994).

  8. Deposition head for laser

    DOEpatents

    Lewis, Gary K.; Less, Richard M.

    1999-01-01

    A deposition head for use as a part of apparatus for forming articles from materials in particulate form in which the materials are melted by a laser beam and deposited at points along a tool path to form an article of the desired shape and dimensions. The deposition head delivers the laser beam and powder to a deposition zone, which is formed at the tip of the deposition head. A controller comprised of a digital computer directs movement of the deposition zone along the tool path and provides control signals to adjust apparatus functions, such as the speed at which the deposition head moves along the tool path.

  9. Astronomical Forcing of Salt Marsh Biogeochemical Cascades

    NASA Astrophysics Data System (ADS)

    Morris, J. T.; Sundberg, K.

    2008-12-01

    Astronomically forced changes in the hydroperiod of a salt marsh affect the rate of marsh primary production leading to a biogeochemical cascade. For example, salt marsh primary production and biogeochemical cycles in coastal salt marshes are sensitive to the 18.6-year lunar nodal cycle, which alters the tidal amplitude by about 5 cm. For marshes that are perched high in the tidal frame, a relatively small increase in tidal amplitude and flooding lowers sediment salinity and stimulates primary production. Porewater sulfide concentrations are positively correlated with tidal amplitude and vary on the same cycle as primary production. Soluble reactive phosphate and ammonium concentrations in pore water also vary on this 18.6- year cycle. Phosphate likely responds to variation in the reaction of sulfide with iron-phosphate compounds, while the production of ammonium in sediments is coupled to the activity of diazotrophs that are carbon- limited and, therefore, are regulated by primary productivity. Ammonium also would accumulate when sulfides block nitrification. These dependencies work as a positive feedback between primary production and nutrient supply and are predictive of the near-term effects of sea-level rise.

  10. Pressure wave propagation studies for oscillating cascades

    NASA Technical Reports Server (NTRS)

    Huff, Dennis L.

    1992-01-01

    The unsteady flowfield around an oscillating cascade of flat plates is studied using a time marching Euler code. Exact solutions based on linear theory serve as model problems to study pressure wave propagation in the numerical solution. The importance of using proper unsteady boundary conditions, grid resolution, and time step is demonstrated. Results show that an approximate non-reflecting boundary condition based on linear theory does a good job of minimizing reflections from the inflow and outflow boundaries and allows the placement of the boundaries to be closer than cases using reflective boundary conditions. Stretching the boundary to dampen the unsteady waves is another way to minimize reflections. Grid clustering near the plates does a better job of capturing the unsteady flowfield than cases using uniform grids as long as the CFL number is less than one for a sufficient portion of the grid. Results for various stagger angles and oscillation frequencies show good agreement with linear theory as long as the grid is properly resolved.

  11. Pressure wave propagation studies for oscillating cascades

    NASA Technical Reports Server (NTRS)

    Huff, Dennis L.

    1992-01-01

    The unsteady flow field around an oscillating cascade of flat plates is studied using a time marching Euler code. Exact solutions based on linear theory serve as model problems to study pressure wave propagation in the numerical solution. The importance of using proper unsteady boundary conditions, grid resolution, and time step is demonstrated. Results show that an approximate non-reflecting boundary condition based on linear theory does a good job of minimizing reflections from the inflow and outflow boundaries and allows the placement of the boundaries to be closer than cases using reflective boundary conditions. Stretching the boundary to dampen the unsteady waves is another way to minimize reflections. Grid clustering near the plates does a better job of capturing the unsteady flow field than cases using uniform grids as long as the CFL number is less than one for a sufficient portion of the grid. Results for various stagger angles and oscillation frequencies show good agreement with linear theory as long as the grid is properly resolved.

  12. Oscillating cascade aerodynamics at large mean incidence

    NASA Technical Reports Server (NTRS)

    Buffum, Daniel H.; King, Aaron J.; El-Aini, Yehia M.; Capece, Vincent R.

    1996-01-01

    The aerodynamics of a cascade of airfoils oscillating in torsion about the midchord is investigated experimentally at a large mean incidence angle and, for reference, at a low mean incidence angle. The airfoil section is representative of a modern, low aspect ratio, fan blade tip section. Time-dependent airfoil surface pressure measurements were made for reduced frequencies of up to 1.2 for out-of-phase oscillations at a Mach number of 0.5 and chordal incidence angles of 0 deg and 10 deg; the Reynolds number was 0.9 x l0(exp 6). For the 10 deg chordal incidence angle, a separation bubble formed at the leading edge of the suction surface. The separated flow field was found to have a dramatic effect on the chordwise distribution of the unsteady pressure. In this region, substantial deviations from the attached flow data were found with the deviations becoming less apparent in the aft region of the airfoil for all reduced frequencies. In particular, near the leading edge the separated flow had a strong destabilizing influence while the attached flow had a strong stabilizing influence.

  13. Cooperative behavior cascades in human social networks

    PubMed Central

    Fowler, James H.; Christakis, Nicholas A.

    2010-01-01

    Theoretical models suggest that social networks influence the evolution of cooperation, but to date there have been few experimental studies. Observational data suggest that a wide variety of behaviors may spread in human social networks, but subjects in such studies can choose to befriend people with similar behaviors, posing difficulty for causal inference. Here, we exploit a seminal set of laboratory experiments that originally showed that voluntary costly punishment can help sustain cooperation. In these experiments, subjects were randomly assigned to a sequence of different groups to play a series of single-shot public goods games with strangers; this feature allowed us to draw networks of interactions to explore how cooperative and uncooperative behaviors spread from person to person to person. We show that, in both an ordinary public goods game and in a public goods game with punishment, focal individuals are influenced by fellow group members’ contribution behavior in future interactions with other individuals who were not a party to the initial interaction. Furthermore, this influence persists for multiple periods and spreads up to three degrees of separation (from person to person to person to person). The results suggest that each additional contribution a subject makes to the public good in the first period is tripled over the course of the experiment by other subjects who are directly or indirectly influenced to contribute more as a consequence. These results show experimentally that cooperative behavior cascades in human social networks. PMID:20212120

  14. Separations by supported liquid membrane cascades

    DOEpatents

    Danesi, Pier R.

    1986-01-01

    The invention describes a new separation technique which leads to multi-stage operations by the use of a series (a cascade) of alternated carrier-containing supported-liquid membranes. The membranes contain alternatively a liquid cation exchanger extractant and a liquid anion exchanger extractant (or a neutral extractant) as carrier. The membranes are spaced between alternated aqueous electrolytic solutions of different composition which alternatively provide positively charged extractable species and negatively charged (or zero charged) extractable species, of the chemical species to be separated. The alternated aqueous electrolytic solutions in addition to providing the driving force to the process, simultaneously function as a stripping solution from one type of membrane and as an extraction-promoting solution for the other type of membrane. The aqueous electrolytic solutions and the supported liquid membranes are arranged in such a way to provide a continuous process which leads to the continuous enrichment of the species which show the highest permeability coefficients. By virtue of the very high number of stages which can be arranged, even chemical species having very similar chemical behavior (and consequently very similar permeability coefficients) can be completely separated. The invention also provide a way to concentrate the separated species.

  15. Cascading reminiscence bumps in popular music.

    PubMed

    Krumhansl, Carol Lynne; Zupnick, Justin Adam

    2013-10-01

    Autobiographical memories are disproportionately recalled for events in late adolescence and early adulthood, a phenomenon called the reminiscence bump. Previous studies on music have found autobiographical memories and life-long preferences for music from this period. In the present study, we probed young adults' personal memories associated with top hits over 5-and-a-half decades, as well as the context of their memories and their recognition of, preference for, quality judgments of, and emotional reactions to that music. All these measures showed the typical increase for music released during the two decades of their lives. Unexpectedly, we found that the same measures peaked for the music of participants' parents' generation. This finding points to the impact of music in childhood and suggests that these results reflect the prevalence of music in the home environment. An earlier peak occurred for 1960s music, which may be explained by its quality or by its transmission through two generations. We refer to this pattern of musical cultural transmission over generations as cascading reminiscence bumps.

  16. Transient Rechargeable Batteries Triggered by Cascade Reactions.

    PubMed

    Fu, Kun; Liu, Zhen; Yao, Yonggang; Wang, Zhengyang; Zhao, Bin; Luo, Wei; Dai, Jiaqi; Lacey, Steven D; Zhou, Lihui; Shen, Fei; Kim, Myeongseob; Swafford, Laura; Sengupta, Louise; Hu, Liangbing

    2015-07-08

    Transient battery is a new type of technology that allows the battery to disappear by an external trigger at any time. In this work, we successfully demonstrated the first transient rechargeable batteries based on dissoluble electrodes including V2O5 as the cathode and lithium metal as the anode as well as a biodegradable separator and battery encasement (PVP and sodium alginate, respectively). All the components are robust in a traditional lithium-ion battery (LIB) organic electrolyte and disappear in water completely within minutes due to triggered cascade reactions. With a simple cut-and-stack method, we designed a fully transient device with an area of 0.5 cm by 1 cm and total energy of 0.1 J. A shadow-mask technique was used to demonstrate the miniature device, which is compatible with transient electronics manufacturing. The materials, fabrication methods, and integration strategy discussed will be of interest for future developments in transient, self-powered electronics. The demonstration of a miniature Li battery shows the feasibility toward system integration for all transient electronics.

  17. Geothermal resource potential of Cascade volcanic arc

    SciTech Connect

    Priest, G.R.

    1987-08-01

    The central and southern cascade volcanic arc has the following features that suggest a high potential for geothermal resources: (1) extensive Quaternary volcanism with some silicic to intermediate volcanoes, (2) hundreds of square kilometers with regional background heat flow in excess of 100 mW/m/sup 2/, (3) shallow (4-9 km) calculated depth to Curie point in the same areas that have heat flow in excess of 100 mW/m/sup 2/, (4) a thick pile of volcanic rock with moderate to low thermal conductivity, (5) hot springs with minimum reservoir temperatures of 174/sup 0/-186/sup 0/C (from the anhydrite geothermometer of Mariner, 1985), and (6) fault zones for fracture permeability. These features are the result of interactions between the North American plate (NAP), the Pacific plate (PP), and the subducted Gorda, Juan de Fuca, and Explorer plates (GJEP). Interactions between the NAP and the PP produce north-south compression and east-west extension, causing extensive development of north-south normal faults and partial melting episodes in upper mantle. Northeast-southwest convergence between the NAP and the GJEP produce subduction-related magmas and crustal deformation from northeast-southwest compression. NAP-GJEP interactions dominate in the northern part of the arc, whereas NAP-PP and NAP-GJEP interactions have combined in the central and southern part of the arc to produce rates of magmatism and heat flow higher than in the north.

  18. A screening cascade to identify ERβ ligands

    PubMed Central

    Filgueira, Carly S.; Benod, Cindy; Lou, Xiaohua; Gunamalai, Prem S.; Villagomez, Rosa A.; Strom, Anders; Gustafsson, Jan-Åke; Berkenstam, Anders L.; Webb, Paul

    2014-01-01

    The establishment of effective high throughput screening cascades to identify nuclear receptor (NR) ligands that will trigger defined, therapeutically useful sets of NR activities is of considerable importance. Repositioning of existing approved drugs with known side effect profiles can provide advantages because de novo drug design suffers from high developmental failure rates and undesirable side effects which have dramatically increased costs. Ligands that target estrogen receptor β (ERβ) could be useful in a variety of diseases ranging from cancer to neurological to cardiovascular disorders. In this context, it is important to minimize cross-reactivity with ERα, which has been shown to trigger increased rates of several types of cancer. Because of high sequence similarities between the ligand binding domains of ERα and ERβ, preferentially targeting one subtype can prove challenging. Here, we describe a sequential ligand screening approach comprised of complementary in-house assays to identify small molecules that are selective for ERβ. Methods include differential scanning fluorimetry, fluorescence polarization and a GAL4 transactivation assay. We used this strategy to screen several commercially-available chemical libraries, identifying thirty ERβ binders that were examined for their selectivity for ERβ versus ERα, and tested the effects of selected ligands in a prostate cancer cell proliferation assay. We suggest that this approach could be used to rapidly identify candidates for drug repurposing. PMID:25422593

  19. Magnetic reconnection from a multiscale instability cascade

    NASA Astrophysics Data System (ADS)

    Moser, Auna L.; Bellan, Paul M.

    2012-02-01

    Magnetic reconnection, the process whereby magnetic field lines break and then reconnect to form a different topology, underlies critical dynamics of magnetically confined plasmas in both nature and the laboratory. Magnetic reconnection involves localized diffusion of the magnetic field across plasma, yet observed reconnection rates are typically much higher than can be accounted for using classical electrical resistivity. It is generally proposed that the field diffusion underlying fast reconnection results instead from some combination of non-magnetohydrodynamic processes that become important on the `microscopic' scale of the ion Larmor radius or the ion skin depth. A recent laboratory experiment demonstrated a transition from slow to fast magnetic reconnection when a current channel narrowed to a microscopic scale, but did not address how a macroscopic magnetohydrodynamic system accesses the microscale. Recent theoretical models and numerical simulations suggest that a macroscopic, two-dimensional magnetohydrodynamic current sheet might do this through a sequence of repetitive tearing and thinning into two-dimensional magnetized plasma structures having successively finer scales. Here we report observations demonstrating a cascade of instabilities from a distinct, macroscopic-scale magnetohydrodynamic instability to a distinct, microscopic-scale (ion skin depth) instability associated with fast magnetic reconnection. These observations resolve the full three-dimensional dynamics and give insight into the frequently impulsive nature of reconnection in space and laboratory plasmas.

  20. Inverse turbulent cascade in swarming sperm

    NASA Astrophysics Data System (ADS)

    Creppy, Adama; Praud, Olivier; Druart, Xavier; Kohnke, Philippa; Plouraboue, Franck; Inra, Cnrs, Umr, F-37380 Nouzilly, France Team; Université de Toulouse, Inpt, Ups, Imft, Umr 5502, France Team

    2014-11-01

    Collective motion of self-sustained swarming flows has recently provided examples of small scale turbulence arising where viscosity effects are dominant. We report the first observation of an universal inverse enstrophy cascade in concentrated swarming sperm consistent with a body of evidence built from various independent measurements. We found a well-defined k-3 power-law decay of velocity field power-spectrum and relative dispersion of small beads consistent with theoretical predictions in two-dimensional turbulence. Concentrated living sperm displays long-range, correlated whirlpool structures the size of which provides turbulence's integral scale. We propose a consistent explanation for this quasi-two-dimensional turbulence based on self-structured laminated flow forced by steric interaction and alignment, a state of active matter that we call ``swarming liquid crystal.'' We develop scaling arguments consistent with this interpretation. The implication of multi-scale collective dynamics of sperm's collective motility for fertility assessment is discussed. This work has been supported by the French Agence Nationale pour la Recherche (ANR) in the frame of the Contract MOTIMO (ANR-11-MONU-009-01). We thank Pierre Degond, Eric Climent, Laurent Lacaze and Frédéric Moulin for interesting discussions.

  1. Herbivore release through cascading risk effects.

    PubMed

    Schmidt-Entling, Martin H; Siegenthaler, Eva

    2009-12-23

    Predators influence prey through consumption, and through trait-mediated effects such as emigration in response to predation risk (risk effects). We studied top-down effects of (sub-) adult wolf spiders (Lycosidae) on arthropods in a meadow. We compared risk effects with the overall top-down effect (including consumption) by gluing the chelicers of wolf spiders to prevent them from killing the prey. In a field experiment, we created three treatments that included either: (i) intact ('predation') wolf spiders; (ii) wolf spiders with glued chelicers ('risk spiders'); or (iii) no (sub-) adult wolf spiders. Young wolf spiders were reduced by their (sub-) adult congeners. Densities of sheetweb spiders (Linyphiidae), a known intraguild prey of wolf spiders, were equally reduced by the presence of risk and predation wolf spiders. Plant- and leafhoppers (Auchenorrhyncha) showed the inverse pattern of higher densities in the presence of both risk and predation wolf spiders. We conclude that (sub-) adult wolf spiders acted as top predators, which reduced densities of intermediate predators and thereby enhanced herbivores. Complementary to earlier studies that found trait-mediated herbivore suppression, our results demonstrate that herbivores can be enhanced through cascading risk effects by top predators.

  2. Steady rotation of the Cascade arc

    USGS Publications Warehouse

    Wells, Ray E.; McCaffrey, Robert

    2013-01-01

    Displacement of the Miocene Cascade volcanic arc (northwestern North America) from the active arc is in the same sense and at nearly the same rate as the present clockwise block motions calculated from GPS velocities in a North American reference frame. Migration of the ancestral arc over the past 16 m.y. can be explained by clockwise rotation of upper-plate blocks at 1.0°/m.y. over a linear melting source moving westward 1–4.5 km/m.y. due to slab rollback. Block motion and slab rollback are in opposite directions in the northern arc, but both are westerly in the southern extensional arc, where rollback may be enhanced by proximity to the edge of the Juan de Fuca slab. Similarities between post–16 Ma arc migration, paleomagnetic rotation, and modern GPS block motions indicate that the secular block motions from decadal GPS can be used to calculate long-term strain rates and earthquake hazards. Northwest-directed Basin and Range extension of 140 km is predicted behind the southern arc since 16 Ma, and 70 km of shortening is predicted in the northern arc. The GPS rotation poles overlie a high-velocity slab of the Siletzia terrane dangling into the mantle beneath Idaho (United States), which may provide an anchor for the rotations.

  3. Evaluating the Spatial Distribution of Toxic Air Contaminants in Multiple Ecosystem Indicators in the Sierra Nevada-Southern Cascades

    NASA Astrophysics Data System (ADS)

    Nanus, L.; Simonich, S. L.; Rocchio, J.; Flanagan, C.

    2013-12-01

    Toxic air contaminants originating from agricultural areas of the Central Valley in California threaten vulnerable sensitive receptors including surface water, vegetation, snow, sediments, fish, and amphibians in the Sierra Nevada-Southern Cascades region. The spatial distribution of toxic air contaminants in different ecosystem indicators depends on variation in atmospheric concentrations and deposition, and variation in air toxics accumulation in ecosystems. The spatial distribution of organic air toxics and mercury at over 330 unique sampling locations and sample types over two decades (1990-2009) in the Sierra Nevada-Southern Cascades region were compiled and maps were developed to further understand spatial patterns and linkages between air toxics deposition and ecological effects. Potential ecosystem impacts in the Sierra Nevada-Southern Cascades region include bioaccumulation of air toxics in both aquatic and terrestrial ecosystems, reproductive disruption, and immune suppression. The most sensitive ecological end points in the region that are affected by bioaccumulation of toxic air contaminants are fish. Mercury was detected in all fish and approximately 6% exceeded human consumption thresholds. Organic air toxics were also detected in fish yielding variable spatial patterns. For amphibians, which are sensitive to pesticide exposure and potential immune suppression, increasing trends in current and historic use pesticides are observed from north to south across the region. In other indicators, such as vegetation, pesticide concentrations in lichen increase with increasing elevation. Current and historic use pesticides and mercury were also observed in snowpack at high elevations in the study area. This study shows spatial patterns in toxic air contaminants, evaluates associated risks to sensitive receptors, and identifies data gaps. Future research on atmospheric modeling and information on sources is needed in order to predict which ecosystems are the

  4. Pretreatment of microbial sludges

    DOEpatents

    Rivard, C.J.; Nagle, N.J.

    1995-01-10

    Methods are described for pretreating microbial sludges to break cells and disrupt organic matter. One method involves the use of sonication, and another method involves the use of shear forces. The pretreatment of sludge enhances bioconversion of the organic fraction. This allows for efficient dewatering of the sludge and reduces the cost for final disposal of the waste.

  5. Pretreatment of microbial sludges

    DOEpatents

    Rivard, Christopher J.; Nagle, Nicholas J.

    1995-01-01

    Methods are described for pretreating microbial sludges to break cells and disrupt organic matter. One method involves the use of sonication, and another method involves the use of shear forces. The pretreatment of sludge enhances bioconversion of the organic fraction. This allows for efficient dewatering of the sludge and reduces the cost for final disposal of the waste.

  6. Microbial Weathering of Olivine

    NASA Technical Reports Server (NTRS)

    McKay, D. S.; Longazo, T. G.; Wentworth, S. J.; Southam, G.

    2002-01-01

    Controlled microbial weathering of olivine experiments displays a unique style of nanoetching caused by biofilm attachment to mineral surfaces. We are investigating whether the morphology of biotic nanoetching can be used as a biosignature. Additional information is contained in the original extended abstract.

  7. Indirect microbial detection

    NASA Technical Reports Server (NTRS)

    Wilkins, J. R.

    1980-01-01

    Indirect method for detection of microbial growth utilizes flow of charged particles across barrier that physically separated growing cells from electrodes and measures resulting difference in potential between two platinum electrodes. Technique allows simplified noncontact monitoring of all growth in highly infectious cultures or in critical biochemical studies.

  8. Automated Microbial Genome Annotation

    SciTech Connect

    Land, Miriam

    2009-05-29

    Miriam Land of the DOE Joint Genome Institute at Oak Ridge National Laboratory gives a talk on the current state and future challenges of moving toward automated microbial genome annotation at the "Sequencing, Finishing, Analysis in the Future" meeting in Santa Fe, NM

  9. SEAGRASS RHIZOSPHERE MICROBIAL COMMUNITIES

    EPA Science Inventory

    Devereux, Richard. 2005. Seagrass Rhizosphere Microbial Communities. In: Interactions Between Macro- and Microorganisms in Marine Sediments. E. Kristense, J.E. Kostka and R.H. Haese, Editors. American Geophysical Union, Washington, DC. p199-216. (ERL,GB 1213).

    Seagrasses ...

  10. A Microbial Murder Mystery.

    ERIC Educational Resources Information Center

    Mitchell, Melissa A.; Mitchell, James K.

    2002-01-01

    Proposes a microbial mystery activity to test students' knowledge of human anatomy and their ability to identify microbes. Provides an opportunity for students to develop logical deductive reasoning. Includes national science education standards related to this activity, activity sheets with whole procedures, and Internet resources. (KHR)

  11. Indirect microbial detection

    NASA Technical Reports Server (NTRS)

    Wilkins, J. R. (Inventor)

    1981-01-01

    The growth of microorganisms in a sample is detected and monitored by culturing microorganisms in a growth medium and detecting a change in potential between two electrodes, separated from the microbial growth by a barrier which is permeable to charged paticles but microorganism impermeable.

  12. Microbial solubilization of coal

    DOEpatents

    Strandberg, G.W.; Lewis, S.N.

    1988-01-21

    The present invention relates to a cell-free preparation and process for the microbial solubilization of coal into solubilized coal products. More specifically, the present invention relates to bacterial solubilization of coal into solubilized coal products and a cell-free bacterial byproduct useful for solubilizing coal. 5 tabs.

  13. Microbial Energy Conversion

    SciTech Connect

    Buckley, Merry; Wall, Judy D.

    2006-10-01

    The American Academy of Microbiology convened a colloquium March 10-12, 2006, in San Francisco, California, to discuss the production of energy fuels by microbial conversions. The status of research into various microbial energy technologies, the advantages and disadvantages of each of these approaches, research needs in the field, and education and training issues were examined, with the goal of identifying routes for producing biofuels that would both decrease the need for fossil fuels and reduce greenhouse gas emissions. Currently, the choices for providing energy are limited. Policy makers and the research community must begin to pursue a broader array of potential energy technologies. A diverse energy portfolio that includes an assortment of microbial energy choices will allow communities and consumers to select the best energy solution for their own particular needs. Funding agencies and governments alike need to prepare for future energy needs by investing both in the microbial energy technologies that work today and in the untested technologies that will serve the world’s needs tomorrow. More mature bioprocesses, such as ethanol production from starchy materials and methane from waste digestors, will find applications in the short term. However, innovative techniques for liquid fuel or biohydrogen production are among the longer term possibilities that should also be vigorously explored, starting now. Microorganisms can help meet human energy needs in any of a number of ways. In their most obvious role in energy conversion, microorganisms can generate fuels, including ethanol, hydrogen, methane, lipids, and butanol, which can be burned to produce energy. Alternatively, bacteria can be put to use in microbial fuel cells, where they carry out the direct conversion of biomass into electricity. Microorganisms may also be used some day to make oil and natural gas technologies more efficient by sequestering carbon or by assisting in the recovery of oil and

  14. Microbial load monitor

    NASA Technical Reports Server (NTRS)

    Caplin, R. S.; Royer, E. R.

    1977-01-01

    Design analysis of a microbial load monitor system flight engineering model was presented. Checkout of the card taper and media pump system was fabricated as well as the final two incubating reading heads, the sample receiving and card loading device assembly, related sterility testing, and software. Progress in these areas was summarized.

  15. Novel interconnect deposition technology

    NASA Astrophysics Data System (ADS)

    Speckman, D. M.; Wendt, J. P.

    1991-12-01

    A new series of experiments was initiated to improve current interconnect deposition technology for integrated circuits. Preliminary aluminum deposition experiments were carried out using trimethylamine(alane) as the precursor, and some mildly reflective, uniform aluminum films were successfully deposited on glass slides, suggesting that chemical vapor deposition (CVD) will be a practicable deposition technique for advanced integrated circuit interconnect films. CVD studies of aluminum and zirconium- and hafnium-diboride thin films are continuing.

  16. Deposit model for volcanogenic uranium deposits

    USGS Publications Warehouse

    Breit, George N.; Hall, Susan M.

    2011-01-01

    The International Atomic Energy Agency's tabulation of volcanogenic uranium deposits lists 100 deposits in 20 countries, with major deposits in Russia, Mongolia, and China. Collectively these deposits are estimated to contain uranium resources of approximately 500,000 tons of uranium, which amounts to 6 percent of the known global resources. Prior to the 1990s, these deposits were considered to be small (less than 10,000 tons of uranium) with relatively low to moderate grades (0.05 to 0.2 weight percent of uranium). Recent availability of information on volcanogenic uranium deposits in Asia highlighted the large resource potential of this deposit type. For example, the Streltsovskoye district in eastern Russia produced more than 100,000 tons of uranium as of 2005; with equivalent resources remaining. Known volcanogenic uranium deposits within the United States are located in Idaho, Nevada, Oregon, and Utah. These deposits produced an estimated total of 800 tons of uranium during mining from the 1950s through the 1970s and have known resources of 30,000 tons of uranium. The most recent estimate of speculative resources proposed an endowment of 200,000 tons of uranium.

  17. The biogeography of trophic cascades on US oyster reefs.

    PubMed

    Kimbro, David L; Byers, James E; Grabowski, Jonathan H; Hughes, A Randall; Piehler, Michael F

    2014-07-01

    Predators can indirectly benefit prey populations by suppressing mid-trophic level consumers, but often the strength and outcome of trophic cascades are uncertain. We manipulated oyster reef communities to test the generality of potential causal factors across a 1000-km region. Densities of oyster consumers were weakly influenced by predators at all sites. In contrast, consumer foraging behaviour in the presence of predators varied considerably, and these behavioural effects altered the trophic cascade across space. Variability in the behavioural cascade was linked to regional gradients in oyster recruitment to and sediment accumulation on reefs. Specifically, asynchronous gradients in these factors influenced whether the benefits of suppressed consumer foraging on oyster recruits exceeded costs of sediment accumulation resulting from decreased consumer activity. Thus, although predation on consumers remains consistent, predator influences on behaviour do not; rather, they interact with environmental gradients to cause biogeographic variability in the net strength of trophic cascades.

  18. Cascade ({xi}) Physics: a New Approach to Baryon Spectroscopy

    SciTech Connect

    Nefkens, B. M. K.

    2006-11-17

    Cascade hyperons have two special characteristics, which are particularly valuable as experimental and theoretical tools: cascades have strangeness minus two and their widths are quite narrow compared to the N* and {delta}+ resonances. The narrow width allows the detection by the missing mass or invariant mass techniques. The makeup of the cascade states is two ''massive'' strange and one light quark, this makes them much more amendable to Lattice Gauge calculations. Using the well established Flavor Symmetry of QCD we can use a comparison of the Cascades with the N* and {delta}* resonances to make a conclusive search for the 'Unseen Resonances' of the quark model, for Hybrid Baryons, Meson-Baryon Bound States and other Exotica. We can investigate the flavor dependence of confinement: is the string tension between two strange quarks the same as between two down quarks?.

  19. Inferring missing data in satellite chlorophyll maps using turbulent cascading

    NASA Astrophysics Data System (ADS)

    Pottier, C.; Turiel, A.; Garcon, V.

    2009-04-01

    Oceanic turbulent flows develop complicated patterns, with eddies, filaments and shear currents. Although usually referred as chaotic, their inner organization is strongly hierarchical: turbulent flows develop cascades, which transfer properties such as energy or scalar density from larger to smaller scales. We present a novel algorithm based on the cascade and able to fill data gaps in satellite images (particularly, chlorophyll concentration maps). The first step is to show that cascade processes for chlorophyll-a concentration images take a simple, explicit form when an appropriate wavelet (here Battle-Lemarié of order 3) representation is used. A reconstruction algorithm exploiting the cascade structure is then given with a detailed description. We discuss the validity and quality of this algorithm when applied to SeaWiFS and MODIS-Aqua ocean color images. An application to merging data from multiple satellite missions is presented together with a demonstration of the benefit of this algorithm over two other merging methods.

  20. Electron-positron cascades in multiple-laser optical traps

    NASA Astrophysics Data System (ADS)

    Vranic, Marija; Grismayer, Thomas; Fonseca, Ricardo A.; Silva, Luis O.

    2017-01-01

    We present an analytical and numerical study of multiple-laser QED cascades induced with linearly polarised laser pulses. We analyse different polarisation orientations and propose a configuration that maximises cascade multiplicity and favours laser absorption. We generalise the analytical estimate for the cascade growth rate previously calculated in the field of two colliding linearly polarised laser pulses and account for multiple laser interaction. The estimate is verified by a comprehensive numerical study of four-laser QED cascades across a range of different laser intensities with QED PIC module of OSIRIS. We show that by using four linearly polarised 30 fs laser pulses, one can convert more than 50% of the total energy to gamma-rays at laser intensity I≃ {{10}24}~\\text{W}~\\text{c}{{\\text{m}}-2} . In this configuration, the laser conversion efficiency is higher compared with the case with two colliding lasers.

  1. Vulnerability and Cosusceptibility Determine the Size of Network Cascades

    NASA Astrophysics Data System (ADS)

    Yang, Yang; Nishikawa, Takashi; Motter, Adilson E.

    2017-01-01

    In a network, a local disturbance can propagate and eventually cause a substantial part of the system to fail in cascade events that are easy to conceptualize but extraordinarily difficult to predict. Here, we develop a statistical framework that can predict cascade size distributions by incorporating two ingredients only: the vulnerability of individual components and the cosusceptibility of groups of components (i.e., their tendency to fail together). Using cascades in power grids as a representative example, we show that correlations between component failures define structured and often surprisingly large groups of cosusceptible components. Aside from their implications for blackout studies, these results provide insights and a new modeling framework for understanding cascades in financial systems, food webs, and complex networks in general.

  2. Statistical analysis of cascading failures in power grids

    SciTech Connect

    Chertkov, Michael; Pfitzner, Rene; Turitsyn, Konstantin

    2010-12-01

    We introduce a new microscopic model of cascading failures in transmission power grids. This model accounts for automatic response of the grid to load fluctuations that take place on the scale of minutes, when optimum power flow adjustments and load shedding controls are unavailable. We describe extreme events, caused by load fluctuations, which cause cascading failures of loads, generators and lines. Our model is quasi-static in the causal, discrete time and sequential resolution of individual failures. The model, in its simplest realization based on the Directed Current description of the power flow problem, is tested on three standard IEEE systems consisting of 30, 39 and 118 buses. Our statistical analysis suggests a straightforward classification of cascading and islanding phases in terms of the ratios between average number of removed loads, generators and links. The analysis also demonstrates sensitivity to variations in line capacities. Future research challenges in modeling and control of cascading outages over real-world power networks are discussed.

  3. Abnormal Behavior in Cascading Dynamics with Node Weight

    PubMed Central

    Wang, Jianwei; Cai, Lin; Xu, Bo; Wu, Yuedan

    2015-01-01

    Considering a preferential selection mechanism of load destination, we introduce a new method to quantify initial load distribution and subsequently construct a simple cascading model. By attacking the node with the highest load, we investigate the cascading dynamics in some synthetic networks. Surprisingly, we observe that for several networks of different structural patterns, a counterintuitive phenomenon emerges if the highest load attack is applied to the system, i.e., investing more resources to protect every node in a network inversely makes the whole network more vulnerable. We explain this ability paradox by analyzing the micro-structural components of the underlying network and therefore reveals how specific structural patterns may influence the cascading dynamics. We discover that the robustness of the network oscillates as the capacity of each node increases. The conclusion of the paper may shed lights on future investigations to avoid the demonstrated ability paradox and subsequent cascading failures in real-world networks. PMID:26451594

  4. Cascading dynamics with local weighted flow redistribution in interdependent networks

    NASA Astrophysics Data System (ADS)

    Qiu, Yuzhuo

    2013-07-01

    We study load cascading dynamics in a system composed of coupled interdependent networks while adopting a local weighted flow redistribution rule. We find that when the intra- or inter-connectivity increases, robustness against the cascade of load failures in the symmetrically coupled interdependent networks increases. In addition, when a failed link has to first split its flow asymmetrically to its neighbouring link groups according to the link types, even though there exists an optimal split, the robustness is lowered in contrast with the non-split situation. Furthermore, the optimal weighting mechanism in an isolated network no longer holds in interdependent networks. Finally, robustness against the cascade of load failures is not guaranteed to increase by making the distribution of the degree of intra-connectivity broader. We confirm these phenomena by theoretical analysis based on mean-field theory. Our findings might have great implications for preventing load-failure-induced local cascades in symmetrically coupled interdependent networks.

  5. Fragmentation of displacement cascades into subcascades: A molecular dynamics study

    SciTech Connect

    Antoshchenkova, E.; Luneville, L.; Simeone, D.; Stoller, R. E.; Hayoun, M.

    2015-01-01

    The fragmentation of displacement cascades into subcascades in copper and iron has been investigated through the molecular dynamics technique. A two-point density correlation function has been used to analyze the cascades as a function of the primary knock-on (PKA) energy. This approach is used as a tool for detecting subcascade formation. The fragmentation can already be identified at the end of the ballistic phase. Its resulting evolution in the peak damage state discriminates between unconnected and connected subcascades. The damage zone at the end of the ballistic phase is the precursor of the extended regions that contain the surviving defects. A fractal analysis of the cascade exhibits a dependence on both the stage of the cascade development and the PKA energy. This type of analysis enables the minimum and maximum displacement spike energies together with the subcascade formation threshold energy to be determined. (C) 2014 Elsevier B.V. All rights reserved.

  6. Secondary flows in cascades of highly loaded turbine blades

    SciTech Connect

    Moustapha, S.H.; Paron, G.J.; Wade, J.H.T.

    1985-10-01

    Experimental measurements of the flow field in a low-speed, large-scale, annular cascade of highly loaded turbine rotor blades are presented. The blade has a turning angle of 128.5 deg, an aspect ratio of 0.88, and a Zweifel coefficient of 1. Detailed cascade tests consisted of inlet and exit flow parameter traverses, blade passage pressure distributions, and flow visualization. The results are presented in the form of contour plots and pitch-averaged radial distributions of losses and flow angles. The measurements are compared with the results obtained for the same blade section tested in a planar cascade. Distribution of the losses and flow angles revealed the presence of two large vortices that occupied a major portion of the trailing edge plane. A large high-loss core was visible in the center of the blade passage and coincided with regions of maximum flow underturning. The measured cascade secondary losses compared well with existing correlations.

  7. OBJECT KINETIC MONTE CARLO SIMULATIONS OF CASCADE ANNEALING IN TUNGSTEN

    SciTech Connect

    Nandipati, Giridhar; Setyawan, Wahyu; Heinisch, Howard L.; Roche, Kenneth J.; Kurtz, Richard J.; Wirth, Brian D.

    2014-03-31

    The objective of this work is to study the annealing of primary cascade damage created by primary knock-on atoms (PKAs) of various energies, at various temperatures in bulk tungsten using the object kinetic Monte Carlo (OKMC) method.

  8. Oregon Cascades Play Fairway Analysis: Faults and Heat Flow maps

    SciTech Connect

    Adam Brandt

    2015-11-15

    This submission includes a fault map of the Oregon Cascades and backarc, a probability map of heat flow, and a fault density probability layer. More extensive metadata can be found within each zip file.

  9. Wind tunnel wall effects in a linear oscillating cascade

    NASA Technical Reports Server (NTRS)

    Buffum, Daniel H.; Fleeter, Sanford

    1991-01-01

    Experiments in a linear oscillating cascade reveal that the wind tunnel walls enclosing the airfoils have, in some cases, a detrimental effect on the oscillating cascade aerodynamics. In a subsonic flow field, biconvex airfoils are driven simultaneously in harmonic, torsion-mode oscillations for a range of interblade phase angle values. It is found that the cascade dynamic periodicity - the airfoil to airfoil variation in unsteady surface pressure - is good for some values of interblade phase angle but poor for others. Correlation of the unsteady pressure data with oscillating flat plate cascade predictions is generally good for conditions where the periodicity is good and poor where the periodicity is poor. Calculations based upon linearized unsteady aerodynamic theory indicate that pressure waves reflected from the wind tunnel walls are responsible for the cases where there is poor periodicity and poor correlation with the predictions.

  10. NASA’s SDO Captures Cascading Magnetic Arches

    NASA Video Gallery

    A dark solar filament above the sun's surface became unstable and erupted on Dec. 16-17, 2015, generating a cascade of magnetic arches. A small eruption to the upper right of the filament was likel...

  11. Detection of silica-rich deposits on Mars.

    PubMed

    Squyres, S W; Arvidson, R E; Ruff, S; Gellert, R; Morris, R V; Ming, D W; Crumpler, L; Farmer, J D; Marais, D J Des; Yen, A; McLennan, S M; Calvin, W; Bell, J F; Clark, B C; Wang, A; McCoy, T J; Schmidt, M E; de Souza, P A

    2008-05-23

    Mineral deposits on the martian surface can elucidate ancient environmental conditions on the planet. Opaline silica deposits (as much as 91 weight percent SiO2) have been found in association with volcanic materials by the Mars rover Spirit. The deposits are present both as light-toned soils and as bedrock. We interpret these materials to have formed under hydrothermal conditions and therefore to be strong indicators of a former aqueous environment. This discovery is important for understanding the past habitability of Mars because hydrothermal environments on Earth support thriving microbial ecosystems.

  12. Geologic Map of the North Cascade Range, Washington

    USGS Publications Warehouse

    Haugerud, Ralph A.; Tabor, Rowland W.

    2009-01-01

    The North Cascade Range, commonly referred to as the North Cascades, is the northern part of the Cascade Range that stretches from northern California into British Columbia, where it merges with the Coast Mountains of British Columbia at the Fraser River. The North Cascades are generally characterized by exposure of plutonic and metamorphic rocks in contrast to the volcanic terrain to the south. The rocks of the North Cascades are more resistant to erosion, display greater relief, and show evidence of more pronounced uplift and recent glaciation. Although the total length of the North Cascade Range, extending north from Snoqualmie Pass in Washington, is about 200 mi (320 km), this compilation map at 1:200,000 scale covers only that part (~150 mi) in the United States. The compilation map is derived mostly from eight 1:100,000-scale quadrangle maps that include all of the North Cascade Range in Washington and a bit of the mostly volcanic part of the Cascade Range to the south (fig. 1, sheet 2). Overall, the area represented by this compilation is about 12,740 mi2 (33,000 km2). The superb alpine scenery of the North Cascade Range and its proximity to major population centers has led to designation of much of the area for recreational use or wilderness preservation. A major part of the map area is in North Cascade National Park. Other restricted use areas are the Alpine Lakes, Boulder River, Clearwater, Glacier Peak, Henry M. Jackson, Lake Chelan-Sawtooth, Mount Baker, Noisy-Diobsud, Norse Peak, and Pasayten Wildernesses and the Mount Baker, Lake Chelan, and Ross Lake National Recreation Areas. The valleys traversed by Washington State Highway 20 east of Ross Lake are preserved as North Cascades Scenic Highway. The map area is traversed by three major highways: U.S. Interstate 90, crossing Snoqualmie Pass; Washington State Highway 2, crossing Stevens Pass; and Washington State Highway 20, crossing Washington Pass. Major secondary roads, as well as a network of U

  13. Elucidating carbon sources driving microbial metabolism during oil sands reclamation.

    PubMed

    Bradford, Lauren M; Ziolkowski, Lori A; Goad, Corey; Warren, Lesley A; Slater, Gregory F

    2017-03-01

    Microbial communities play key roles in remediation and reclamation of contaminated environments via biogeochemical cycling of organic and inorganic components. Understanding the trends in in situ microbial community abundance, metabolism and carbon sources is therefore a crucial component of effective site management. The focus of this study was to use radiocarbon analysis to elucidate the carbon sources driving microbial metabolism within the first pilot wetland reclamation project in the Alberta oil sands region where the observation of H2S had indicated the occurrence of microbial sulphate reduction. The reclamation project involved construction of a three compartment system consisting of a freshwater wetland on top of a sand cap overlying a composite tailings (CT) deposit. Radiocarbon analysis demonstrated that both dissolved and sediment associated organic carbon associated with the deepest compartments (the CT and sand cap) was primarily fossil (Δ(14)C = -769 to -955‰) while organic carbon in the overlying peat was hundreds to thousands of years old (Δ(14)C = -250 to -350‰). Radiocarbon contents of sediment associated microbial phospholipid fatty acids (PLFA) were consistent with the sediment bulk organic carbon pools (Peat: Δ(14)CPLFA = -257‰; Sand cap Δ(14)CPLFA = -805‰) indicating that these microbes were using sediment associated carbon. In contrast, microbial PLFA grown on biofilm units installed in wells within the deepest compartments contained much more modern carbon that the associated bulk carbon pools. This implied that the transfer of relatively more modern carbon was stimulating the microbial community at depth within the system. Correlation between cellular abundance estimates based on PLFA concentrations and the Δ(14)CPLFA indicated that the utilization of this more modern carbon was stimulating the microbial community at depth. These results highlight the importance of understanding the occurrence and potential outcomes

  14. Electroluminescence of quantum-dash-based quantum cascade laser structures

    SciTech Connect

    Liverini, V.; Bismuto, A.; Nevou, L.; Beck, M.; Faist, J.

    2011-12-23

    We developed two mid-infrared quantum cascade structures based on InAs quantum dashes. The dashes were embedded either in AlInGaAs lattice-matched to InP or in tensile-strained AlInAs. The devices emit between 7 and 11 {mu}m and are a step forward in the development of quantum cascade lasers based on 3-D confined active regions.

  15. Transient dynamics increasing network vulnerability to cascading failures.

    PubMed

    Simonsen, Ingve; Buzna, Lubos; Peters, Karsten; Bornholdt, Stefan; Helbing, Dirk

    2008-05-30

    We study cascading failures in networks using a dynamical flow model based on simple conservation and distribution laws. It is found that considering the flow dynamics may imply reduced network robustness compared to previous static overload failure models. This is due to the transient oscillations or overshooting in the loads, when the flow dynamics adjusts to the new (remaining) network structure. The robustness of networks showing cascading failures is generally given by a complex interplay between the network topology and flow dynamics.

  16. Aeroelasticity in Turbomachines. Comparison of Theoretical and Experimental Cascade Results.

    DTIC Science & Technology

    1986-01-01

    time: T = t/T o To period of a cycle s t time s v velocity m/s Vre f reference velocity for reduced frequency m/s Vref Y for compresor cascade Vref...or quasi- three-dimensional cascades. Such interesting phenomena as rotor-stator interactions, stalled flutter and fully three-dimensional effects... stall , choke, shockwaves, coupling effects between the steady and unsteady flow fields...). The distribution of the blade surface pressure difference

  17. Microbial respiration per unit microbial biomass increases with carbon-to-nutrient ratios in soils

    NASA Astrophysics Data System (ADS)

    Spohn, Marie; Chodak, Marcin

    2015-04-01

    and the litter C:N ratio resulted from an increase in respiration with the C:N ratio in combination with no significant effect of the litter C:N ratio on the soil microbial biomass C concentration. The results suggest that soil microorganisms respire more C both in absolute terms and per unit microbial biomass C when decomposing N-poor substrate. Thus, the findings indicate that atmospheric N deposition, leading to decreased litter C:N ratios, might decrease microbial respiration in soils. Together, the two studies show that the respiration rate per unit microbial biomass C is not constant but increases with the soil carbon-to-nutrient ratio. References Spohn, M; Chodak, M (2015): Microbial respiration per unit biomass increases with carbon-to-nutrient ratios in forest soils, Soil Biology & Biochemistry 81, 128-133, doi:10.1016/j.soilbio.2014.11.008 Spohn, M (2014): Microbial respiration per unit microbial biomass depends on soil litter carbon-to-nitrogen ratio, Biogeosciences Discussions 11, 15037-15051, doi:10.5194/bgd-11-15037-2014

  18. Applications of Microbial Cell Sensors

    NASA Astrophysics Data System (ADS)

    Shimomura-Shimizu, Mifumi; Karube, Isao

    Since the first microbial cell sensor was studied by Karube et al. in 1977, many types of microbial cell sensors have been developed as analytical tools. The microbial cell sensor utilizes microbes as a sensing element and a transducer. The characteristics of microbial cell sensors as sensing devices are a complete contrast to those of enzyme sensors or immunosensors, which are highly specific for the substrates of interest, although the specificity of the microbial cell sensor has been improved by genetic modification of the microbe used as the sensing element. Microbial cell sensors have the advantages of tolerance to measuring conditions, a long lifetime, and good cost performance, and have the disadvantage of a long response time. In this review, applications of microbial cell sensors are summarized.

  19. Spatial Control of Biochemical Modification Cascades and Pathways

    PubMed Central

    Alam-Nazki, Aiman; Krishnan, J.

    2015-01-01

    Information transmission in cells occurs through complex networks of proteins and genes and is relayed through cascades of biochemical modifications, which are typically studied through ordinary differential equations. However, it is becoming increasingly clear that spatial factors can strongly influence chemical information transmission in cells. In this article, we systematically disentangle the effects of space in signaling cascades. This is done by examining the effects of localization/compartmentalization and diffusion of enzymes and substrates in multiple variants of chemical modification cascades. This includes situations where the modified form of species at one stage 1) acts as an enzyme for the next stage; 2) acts as a substrate for the next stage; and 3) is involved in phosphotransfer. Our analysis reveals the multiple effects of space in signal transduction cascades. Although in some cases space plays a modulatory effect (itself of interest), in other cases, spatial regulation and control can profoundly affect the nature of information processing as a result of the subtle interplay between the patterns of localization of species, diffusion, and the nature of the modification cascades. Our results provide a platform for disentangling the role of space and spatial control in multiple cellular contexts and a basis for engineering spatial control in signaling cascades through localization/compartmentalization. PMID:26083931

  20. Damped trophic cascades driven by fishing in model marine ecosystems.

    PubMed

    Andersen, K H; Pedersen, M

    2010-03-07

    The largest perturbation on upper trophic levels of many marine ecosystems stems from fishing. The reaction of the ecosystem goes beyond the trophic levels directly targeted by the fishery. This reaction has been described either as a change in slope of the overall size spectrum or as a trophic cascade triggered by the removal of top predators. Here we use a novel size- and trait-based model to explore how marine ecosystems might react to perturbations from different types of fishing pressure. The model explicitly resolves the whole life history of fish, from larvae to adults. The results show that fishing does not change the overall slope of the size spectrum, but depletes the largest individuals and induces trophic cascades. A trophic cascade can propagate both up and down in trophic levels driven by a combination of changes in predation mortality and food limitation. The cascade is damped as it comes further away from the perturbed trophic level. Fishing on several trophic levels leads to a disappearance of the signature of the trophic cascade. Differences in fishing patterns among ecosystems might influence whether a trophic cascade is observed.