Spatial-temporal variability of soil water content in a cropland-shelterbelt-desert site in an arid inland river basin of Northwest China

NASA Astrophysics Data System (ADS)

Shen, Qin; Gao, Guangyao; Hu, Wei; Fu, Bojie

2016-09-01

Knowledge of the spatial-temporal variability of soil water content (SWC) is critical for understanding a range of hydrological processes. In this study, the spatial variance and temporal stability of SWC were investigated in a cropland-shelterbelt-desert site at the oasis-desert ecotone in the middle of the Heihe River Basin, China. The SWC was measured on 65 occasions to a depth of 2.8 m at 45 locations during two growing seasons from 2012 to 2013. The standard deviation of the SWC versus the mean SWC exhibited a convex upward relationship in the shelterbelt with the greatest spatial variation at the SWC of around 22.0%, whereas a linearly increasing relationship was observed for the cropland, desert, and land use pattern. The standard deviation of the relative difference was positively linearly correlated with the SWC (p < 0.05) for the land use pattern, whereas such a relationship was not found in the three land use types. The spatial pattern of the SWC was more time stable for the land use pattern, followed by desert, shelterbelt, and cropland. The spatial pattern of SWC changed dramatically among different soil layers. The locations representing the mean SWC varied with the depth, and no location could represent the whole soil profile due to different soil texture, root distribution and irrigation management. The representative locations of each soil layer could be used to estimate the mean SWC well. The statistics of temporal stability of the SWC could be presented equally well with a low frequency of observation (30-day interval) as with a high frequency (5-day interval). Sampling frequency had little effect on the selection of the representative locations of the field mean SWC. This study provides useful information for designing the optimal strategy for sampling SWC at the oasis-desert ecotone in the arid inland river basin.

Soil seed bank in different habitats of the Eastern Desert of Egypt.

PubMed

Gomaa, Nasr H

2012-04-01

The floristic composition and species diversity of the germinable soil seed bank were studied in three different habitats (desert salinized land, desert wadi, and reclaimed land) in the Eastern Desert of Egypt. Moreover, the degree of similarity between the seed bank and the above-ground vegetation was determined. The seed bank was studied in 40 stands representing the three habitats. Ten soil samples (each 25 × 20 cm and 5 cm depth) were randomly taken per stand. The seed bank was investigated by the seedling emergence method. Some 61 species belonging to 21 families and 54 genera were identified in the germinable seed bank. The recorded species include 43 annuals and 18 perennials. Ordination of stands by Detrended Correspondence Analysis (DCA) indicates that the stands of the three habitats are markedly distinguishable and show a clear pattern of segregation on the ordination planes. This indicates variations in the species composition among habitats. The results also demonstrate significant associations between the floristic composition of the seed bank and edaphic factors such as CaCO3, electrical conductivity, organic carbon and soil texture. The reclaimed land has the highest values of species richness, Shannon-index of diversity and the density of the germinable seed bank followed by the habitats of desert wadi and desert salinized land. Motyka's similarity index between the seed bank and the above-ground vegetation is significantly higher in reclaimed land (75.1%) compared to desert wadi (38.4%) and desert salinized land (36.5%).

Properties of Subsurface Soil Cores from Four Geologic Provinces Surrounding Mars Desert Research Station, Utah: Characterizing Analog Martian Soil in a Human Exploration Scenario

NASA Technical Reports Server (NTRS)

Stoker, C. R.; Clarke, J. D. A.; Direito, S.; Foing, B.

2011-01-01

The DOMEX program is a NASA-MMAMA funded project featuring simulations of human crews on Mars focused on science activities that involve collecting samples from the subsurface using both manual and robotic equipment methods and analyzing them in the field and post mission. A crew simulating a human mission to Mars performed activities focused on subsurface science for 2 weeks in November 2009 at Mars Desert Research Station near Hanksville, Utah --an important chemical and morphological Mars analog site. Activities performed included 1) survey of the area to identify geologic provinces, 2) obtaining soil and rock samples from each province and characterizing their mineralogy, chemistry, and biology; 3) site selection and reconnaissance for a future drilling mission; 4) deployment and testing of Mars Underground Mole, a percussive robotic soil sampling device; and 5) recording and analyzing how crew time was used to accomplish these tasks. This paper summarizes results from analysis of soil cores

Microbiome of Yermic Regosol in southern Kazakhstan

NASA Astrophysics Data System (ADS)

Kutovaya, Olga; Lebedeva, Marina; Tkhakakhova, Azida

2014-05-01

Biological activity is of utmost importance for the genesis of extremely arid desert soils. The soil surface in arid regions is often covered by biofilms representing a complex biocenosis of algae, bacteria, micromycetes, and, sometimes, mosses or lichens. Biofilms of extremely arid soils form a significant part of the living matter in the desert ecosystems and play the central role in their dynamics. Study of the genetic material recovered directly from the soil samples is the main approach in soil metagenomics. Modern sequencing methods were used to describe the diversity of the microorganisms in soil samples. For the first time, such data were obtained for the extremely arid desert soil (Yermic Regosol) in southern Kazakhstan (flat alluvial plain; 43° 42'53.2" N; 79°25'29.1" E; 615 m asl). Taxonomic identification of nucleotide sequences and comparative analysis of microbial communities were performed using VAMPS. The classification of the sequences was performed using RDP. As the primers used were based on the sequences of 16S-rRNA gene of bacteria and archaea, we could analyze the prokaryotic community. Along with bacteria and archaea with established systematic position, all soil samples contained unidentified sequences (5.2-5.3%). Bacteria predominated at the domain level (65.9-74.9%), although their portion was much lower in comparison with that in less arid soils, where it reached 94-100%. Archaea were present as minor components (0.3-0.5%). Dominant groups of bacteria were represented by Proteobacteria (43.9-50.8%), Actinobacteria (9.5-10%), Firmicutes (0.8-2.4%), Verrucomicrobia (1.1-3%), Acidobacteria (1.1-2%), Bacteroidetes (1.2-1.4%). The portion of other phyla was less than 1%. Thus, bacterial phyla Proteobacteria, Actinobacteria and Acidobacteria constitute the core component of the microbiome. Archaea are represented by phylum Crenarchaeota. A key feature of the extremely arid soils is the presence of large numbers (24.7-33.6%) of cyanobacteria in the composition of DNA of the microbial community. Cyanobacteria play the major role in immobilization of carbon in the course of their photosynthetic activity. The biogenome of the studied soil consists of 27 families including dominant: Cyanobacteria (24.7-33.6%), Enterobacteriaceae from the class Gammaproteobacteria (13.0-15.6%), Pseudomonadaceae (1.6-11.7%), order Myxococcales (0.9-13.2%), which is found only in desert soils, and Moraxellaceae (0.7-8.1%) and Acetobacteraceae (2.9-3.2%) (also endemic organisms). Unclassified (at family level) bacteria from the order Burkholderiales were found in the soil samples (36 and 54 sequences, or 1.2-2.1%). We suppose that these are DNA of iron bacteria Leptothrix, whose presence in the soils was identified using the method of fouling glasses. The data on the biodiversity and genomic characterization of extremely arid desert soils in Kazakhstan reflect the actual species diversity of soil microorganisms. This study was supported by the Russian Foundation for Basic Research, project no. 12-04-00990a.

Dynamics of cover, UV-protective pigments, and quantum yield in biological soil crust communities of an undisturbed Mojave Desert shrubland

USGS Publications Warehouse

Belnap, Jayne; Phillips, Susan L.; Smith, Stanley D.

2007-01-01

Biological soil crusts are an integral part of dryland ecosystems. We monitored the cover of lichens and mosses, cyanobacterial biomass, concentrations of UV-protective pigments in both free-living and lichenized cyanobacteria, and quantum yield in the soil lichen species Collema in an undisturbed Mojave Desert shrubland. During our sampling time, the site received historically high and low levels of precipitation, whereas temperatures were close to normal. Lichen cover, dominated by Collema tenax and C. coccophorum, and moss cover, dominated by Syntrichia caninervis, responded to both increases and decreases in precipitation. This finding for Collema spp. at a hot Mojave Desert site is in contrast to a similar study conducted at a cool desert site on the Colorado Plateau in SE Utah, USA, where Collema spp. cover dropped in response to elevated temperatures, but did not respond to changes in rainfall. The concentrations of UV-protective pigments in free-living cyanobacteria at the Mojave Desert site were also strongly and positively related to rainfall received between sampling times (R2 values ranged from 0.78 to 0.99). However, pigment levels in the lichenized cyanobacteria showed little correlation with rainfall. Quantum yield in Collema spp. was closely correlated with rainfall. Climate models in this region predict a 3.5–4.0 °C rise in temperature and a 15–20% decline in winter precipitation by 2099. Based on our data, this rise in temperature is unlikely to have a strong effect on the dominant species of the soil crusts. However, the predicted drop in precipitation will likely lead to a decrease in soil lichen and moss cover, and high stress or mortality in soil cyanobacteria as levels of UV-protective pigments decline. In addition, surface-disturbing activities (e.g., recreation, military activities, fire) are rapidly increasing in the Mojave Desert, and these disturbances quickly remove soil lichens and mosses. These stresses combined are likely to lead to shifts in species composition and the local extirpation of some lichen or moss species. As these organisms are critical components of nutrient cycling, soil fertility, and soil stability, such changes are likely to reverberate throughout these ecosystems.

Spatial Variability and Stocks of Soil Organic Carbon in the Gobi Desert of Northwestern China

PubMed Central

Zhang, Pingping; Shao, Ming'an

2014-01-01

Soil organic carbon (SOC) plays an important role in improving soil properties and the C global cycle. Limited attention, though, has been given to assessing the spatial patterns and stocks of SOC in desert ecosystems. In this study, we quantitatively evaluated the spatial variability of SOC and its influencing factors and estimated SOC storage in a region (40 km2) of the Gobi desert. SOC exhibited a log-normal depth distribution with means of 1.6, 1.5, 1.4, and 1.4 g kg−1 for the 0–10, 10–20, 20–30, and 30–40 cm layers, respectively, and was moderately variable according to the coefficients of variation (37–42%). Variability of SOC increased as the sampling area expanded and could be well parameterized as a power function of the sampling area. Significant correlations were detected between SOC and soil physical properties, i.e. stone, sand, silt, and clay contents and soil bulk density. The relatively coarse fractions, i.e. sand, silt, and stone contents, had the largest effects on SOC variability. Experimental semivariograms of SOC were best fitted by exponential models. Nugget-to-sill ratios indicated a strong spatial dependence for SOC concentrations at all depths in the study area. The surface layer (0–10 cm) had the largest spatial dependency compared with the other layers. The mapping revealed a decreasing trend of SOC concentrations from south to north across this region of the Gobi desert, with higher levels close to an oasis and lower levels surrounded by mountains and near the desert. SOC density to depths of 20 and 40 cm for this 40 km2 area was estimated at 0.42 and 0.68 kg C m−2, respectively. This study provides an important contribution to understanding the role of the Gobi desert in the global carbon cycle. PMID:24733073

Research on chemical characteristics of soil salt crusts with saline groundwater drip-irrigation in the Tarim Desert Highway Shelterbelt.

PubMed

Zhang, Jianguo; Xu, Xinwen; Lei, Jiaqiang; Li, Shengyu

2013-01-01

Soil salt crusts are special layers at soil surface which are widely distributed in the Trim Desert Highway Shelterbelt under drip-irrigation with high salinity groundwater. In order to reveal annual variation of their chemical characteristics, soil salt crusts in shelterbelt of different ages in hinterland of the Taklimakan Desert were sampled. SOM, total salt, inions and pH were analyzed. Following results were obtained. SOM of salt crusts increased with the shelterbelt ages, but increasing trend became lower gradually. Total salt, ions, and pH of salt crusts reduced gradually with the shelterbelt ages. Total salt of salt crusts in shelterbelt of different ages was much higher than shifting sandy land. Ions were higher than shifting sandy land, Cl(-), Na(+), and SO4 (2-) increased more obvious, then Mg(2+), K(+), Ca(2+) and HCO3 (-), CO3 (2-) was little and nearly had no change. pH was all alkaline, pH of salt crusts in shelterbelt of 11 years was even lower than shifting sandy land. We can include that the quality of shallow soil (0~30 cm) in the Trim Desert Highway Shelterbelt becomes better gradually.

Desert farming benefits from microbial potential in arid soils and promotes diversity and plant health.

PubMed

Köberl, Martina; Müller, Henry; Ramadan, Elshahat M; Berg, Gabriele

2011-01-01

To convert deserts into arable, green landscapes is a global vision, and desert farming is a strong growing area of agriculture world-wide. However, its effect on diversity of soil microbial communities, which are responsible for important ecosystem services like plant health, is still not known. We studied the impact of long-term agriculture on desert soil in one of the most prominent examples for organic desert farming in Sekem (Egypt). Using a polyphasic methodological approach to analyse microbial communities in soil as well as associated with cultivated plants, drastic effects caused by 30 years of agriculture were detected. Analysing bacterial fingerprints, we found statistically significant differences between agricultural and native desert soil of about 60%. A pyrosequencing-based analysis of the 16S rRNA gene regions showed higher diversity in agricultural than in desert soil (Shannon diversity indices: 11.21/7.90), and displayed structural differences. The proportion of Firmicutes in field soil was significantly higher (37%) than in the desert (11%). Bacillus and Paenibacillus play the key role: they represented 96% of the antagonists towards phytopathogens, and identical 16S rRNA sequences in the amplicon library and for isolates were detected. The proportion of antagonistic strains was doubled in field in comparison to desert soil (21.6%/12.4%); disease-suppressive bacteria were especially enriched in plant roots. On the opposite, several extremophilic bacterial groups, e.g., Acidimicrobium, Rubellimicrobium and Deinococcus-Thermus, disappeared from soil after agricultural use. The N-fixing Herbaspirillum group only occurred in desert soil. Soil bacterial communities were strongly driven by the a-biotic factors water supply and pH. After long-term farming, a drastic shift in the bacterial communities in desert soil was observed. Bacterial communities in agricultural soil showed a higher diversity and a better ecosystem function for plant health but a loss of extremophilic bacteria. Interestingly, we detected that indigenous desert microorganisms promoted plant health in desert agro-ecosystems.

Validation of SWEEP for creep, saltation, and suspension in a desert-oasis ecotone

NASA Astrophysics Data System (ADS)

Pi, H.; Sharratt, B.; Feng, G.; Lei, J.; Li, X.; Zheng, Z.

2016-03-01

Wind erosion in the desert-oasis ecotone can accelerate desertification, but little is known about the susceptibility of the ecotone to wind erosion in the Tarim Basin despite being a major source of windblown dust in China. The objective of this study was to test the performance of the Single-event Wind Erosion Evaluation Program (SWEEP) in simulating soil loss as creep, saltation, and suspension in a desert-oasis ecotone. Creep, saltation, and suspension were measured and simulated in a desert-oasis ecotone of the Tarim Basin during discrete periods of high winds in spring 2012 and 2013. The model appeared to adequately simulate total soil loss (ranged from 23 to 2272 g m-2 across sample periods) according to the high index of agreement (d = 0.76). The adequate agreement of the SWEEP in simulating total soil loss was due to the good performance of the model (d = 0.71) in simulating creep plus saltation. The SWEEP model, however, inadequately simulated suspension based upon a low d (⩽0.43). The slope estimates of the regression between simulated and measured suspension and difference of mean suggested that the SWEEP underestimated suspension. The adequate simulation of creep plus saltation thus provides reasonable estimates of total soil loss using SWEEP in a desert-oasis environment.

[Characteristics of soil nematode community along an age sequence of sandy desert soil cultivation in a marginal oasis of middle reaches of Heihe River].

PubMed

Wang, Xue-Feng; Su, Yong-Zhong; Yang, Rong

2010-08-01

This paper studied the characteristics of soil nematode community following the conversion of native sandy desert soil to irrigated farmland in a marginal oasis of the middle reaches of Heihe River basin, aimed to approach the bioindicating function of soil nematodes in soil evolution process. A total of 27921 soil nematode individuals were captured, belonging to 25 families and 34 genera. The total number of nematodes increased gradually with increasing age of cultivation. At all sampling sites, bacterivores and plant parasites were the dominant trophic groups, and made up the main parts of nematode community in oasis farmland. Through the analysis of the evenness index (J) and dominance index (lambda) of nematode community, the ecosystems were found to be fragile for the farmlands having cultivated for 0, 10, and > 50 years. The maturity index MI2-5 and MMI decreased with increasing cultivation age, suggesting that the practice of agricultural use enhanced the disturbance on farmland. The soil properties changed significantly after 10 years of cultivation, which was at a significant change stage for the structure stability of soil ecosystems. The characteristics of soil nematode community could be used as the bioindicator of soil evolution following the conversion of native desert soil to irrigated farmland.

Epifluorescent direct counts of bacteria and viruses from topsoil of various desert dust storm regions

USGS Publications Warehouse

Gonzalez-Martin, Cristina; Teigell-Perez, Nuria; Lyles, Mark; Valladares, Basilio; Griffin, Dale W.

2013-01-01

Topsoil from arid regions is the main source of dust clouds that move through the earth's atmosphere, and microbial communities within these soils can survive long-range dispersion. Microbial abundance and chemical composition were analyzed in topsoil from various desert regions. Statistical analyses showed that microbial direct counts were strongly positively correlated with calcium concentrations and negatively correlated with silicon concentrations. While variance between deserts was expected, it was interesting to note differences between sample sites within a given desert region, illustrating the 'patchy' nature of microbial communities in desert environments.

Bacterial community structure in the hyperarid core of the Atacama Desert, Chile

USGS Publications Warehouse

Drees, Kevin P.; Neilson, Julia W.; Betancourt, Julio L.; Quade, Jay; Henderson, David A.; Pryor, Barry M.; Maier, Raina M.

2006-01-01

Soils from the hyperarid Atacama Desert of northern Chile were sampled along an east-west elevational transect (23.75 to 24.70 degrees S) through the driest sector to compare the relative structure of bacterial communities. Analysis of denaturing gradient gel electrophoresis (DGGE) profiles from each of the samples revealed that microbial communities from the extreme hyperarid core of the desert clustered separately from all of the remaining communities. Bands sequenced from DGGE profiles of two samples taken at a 22-month interval from this core region revealed the presence of similar populations dominated by bacteria from the Gemmatimonadetes and Planctomycetes phyla.

Evidence for photochemical production of reactive oxygen species in desert soils.

PubMed

Georgiou, Christos D; Sun, Henry J; McKay, Christopher P; Grintzalis, Konstantinos; Papapostolou, Ioannis; Zisimopoulos, Dimitrios; Panagiotidis, Konstantinos; Zhang, Gaosen; Koutsopoulou, Eleni; Christidis, George E; Margiolaki, Irene

2015-05-11

The combination of intense solar radiation and soil desiccation creates a short circuit in the biogeochemical carbon cycle, where soils release significant amounts of CO2 and reactive nitrogen oxides by abiotic oxidation. Here we show that desert soils accumulate metal superoxides and peroxides at higher levels than non-desert soils. We also show the photogeneration of equimolar superoxide and hydroxyl radical in desiccated and aqueous soils, respectively, by a photo-induced electron transfer mechanism supported by their mineralogical composition. Reactivity of desert soils is further supported by the generation of hydroxyl radical via aqueous extracts in the dark. Our findings extend to desert soils the photogeneration of reactive oxygen species by certain mineral oxides and also explain previous studies on desert soil organic oxidant chemistry and microbiology. Similar processes driven by ultraviolet radiation may be operating in the surface soils on Mars.

Autochthonous bioaugmentation with environmental samples rich in hydrocarbonoclastic bacteria for bench-scale bioremediation of oily seawater and desert soil.

PubMed

Ali, Nedaa; Dashti, Narjes; Salamah, Samar; Al-Awadhi, Husain; Sorkhoh, Naser; Radwan, Samir

2016-05-01

Oil-contaminated seawater and desert soil batches were bioaugmented with suspensions of pea (Pisum sativum) rhizosphere and soil with long history of oil pollution. Oil consumption was measured by gas-liquid chromatography. Hydrocarbonoclastic bacteria in the bioremediation batches were counted using a mineral medium with oil vapor as a sole carbon source and characterized by their 16S ribosomal RNA (rRNA)-gene sequences. Most of the oil was consumed during the first 2-4 months, and the oil-removal rate decreased or ceased thereafter due to nutrient and oxygen depletion. Supplying the batches with NaNO3 (nitrogen fertilization) at a late phase of bioremediation resulted in reenhanced oil consumption and bacterial growth. In the seawater batches bioaugmented with rhizospheric suspension, the autochthonous rhizospheric bacterial species Microbacterium oxidans and Rhodococcus spp. were established and contributed to oil-removal. The rhizosphere-bioaugmented soil batches selectively favored Arthrobacter nitroguajacolicus, Caulobacter segnis, and Ensifer adherens. In seawater batches bioaugmented with long-contaminated soil, the predominant oil-removing bacterium was the marine species Marinobacter hydrocarbonoclasticus. In soil batches on the other hand, the autochthonous inhabitants of the long-contaminated soil, Pseudomonas and Massilia species were established and contributed to oil removal. It was concluded that the use of rhizospheric bacteria for inoculating seawater and desert soil and of bacteria in long-contaminated soil for inoculating desert soil follows the concept of "autochthonous bioaugmentation." Inoculating seawater with bacteria in long-contaminated soil, on the other hand, merits the designation "allochthonous bioaugmentation."

Abiotic factors shape microbial diversity in Sonoran Desert soils.

PubMed

Andrew, David R; Fitak, Robert R; Munguia-Vega, Adrian; Racolta, Adriana; Martinson, Vincent G; Dontsova, Katerina

2012-11-01

High-throughput, culture-independent surveys of bacterial and archaeal communities in soil have illuminated the importance of both edaphic and biotic influences on microbial diversity, yet few studies compare the relative importance of these factors. Here, we employ multiplexed pyrosequencing of the 16S rRNA gene to examine soil- and cactus-associated rhizosphere microbial communities of the Sonoran Desert and the artificial desert biome of the Biosphere2 research facility. The results of our replicate sampling approach show that microbial communities are shaped primarily by soil characteristics associated with geographic locations, while rhizosphere associations are secondary factors. We found little difference between rhizosphere communities of the ecologically similar saguaro (Carnegiea gigantea) and cardón (Pachycereus pringlei) cacti. Both rhizosphere and soil communities were dominated by the disproportionately abundant Crenarchaeota class Thermoprotei, which comprised 18.7% of 183,320 total pyrosequencing reads from a comparatively small number (1,337 or 3.7%) of the 36,162 total operational taxonomic units (OTUs). OTUs common to both soil and rhizosphere samples comprised the bulk of raw sequence reads, suggesting that the shared community of soil and rhizosphere microbes constitute common and abundant taxa, particularly in the bacterial phyla Proteobacteria, Actinobacteria, Planctomycetes, Firmicutes, Bacteroidetes, Chloroflexi, and Acidobacteria. The vast majority of OTUs, however, were rare and unique to either soil or rhizosphere communities and differed among locations dozens of kilometers apart. Several soil properties, particularly soil pH and carbon content, were significantly correlated with community diversity measurements. Our results highlight the importance of culture-independent approaches in surveying microbial communities of extreme environments.

Abiotic Factors Shape Microbial Diversity in Sonoran Desert Soils

PubMed Central

Fitak, Robert R.; Munguia-Vega, Adrian; Racolta, Adriana; Martinson, Vincent G.; Dontsova, Katerina

2012-01-01

High-throughput, culture-independent surveys of bacterial and archaeal communities in soil have illuminated the importance of both edaphic and biotic influences on microbial diversity, yet few studies compare the relative importance of these factors. Here, we employ multiplexed pyrosequencing of the 16S rRNA gene to examine soil- and cactus-associated rhizosphere microbial communities of the Sonoran Desert and the artificial desert biome of the Biosphere2 research facility. The results of our replicate sampling approach show that microbial communities are shaped primarily by soil characteristics associated with geographic locations, while rhizosphere associations are secondary factors. We found little difference between rhizosphere communities of the ecologically similar saguaro (Carnegiea gigantea) and cardón (Pachycereus pringlei) cacti. Both rhizosphere and soil communities were dominated by the disproportionately abundant Crenarchaeota class Thermoprotei, which comprised 18.7% of 183,320 total pyrosequencing reads from a comparatively small number (1,337 or 3.7%) of the 36,162 total operational taxonomic units (OTUs). OTUs common to both soil and rhizosphere samples comprised the bulk of raw sequence reads, suggesting that the shared community of soil and rhizosphere microbes constitute common and abundant taxa, particularly in the bacterial phyla Proteobacteria, Actinobacteria, Planctomycetes, Firmicutes, Bacteroidetes, Chloroflexi, and Acidobacteria. The vast majority of OTUs, however, were rare and unique to either soil or rhizosphere communities and differed among locations dozens of kilometers apart. Several soil properties, particularly soil pH and carbon content, were significantly correlated with community diversity measurements. Our results highlight the importance of culture-independent approaches in surveying microbial communities of extreme environments. PMID:22885757

Distribution and Diversity of Organic and Biological Signatures in Soils From the Atacama Desert

NASA Technical Reports Server (NTRS)

Sharma, Aditi

2005-01-01

The Atacama Desert is amongst the driest places on Earth. It is considered to be a suitable analog for the Martian surface in which to conduct studies of life and life detection. Soil samples were collected in June 2005 from the Atacama Desert and analyzed in the lab for amino acid content. HPLC was the primary tool used to analyze samples. The amino acids of interest are aspartic acid, serine, glutamic acid, glycine, and alanine. D and L isomers of each amino acid (except for glycine) were separated through HPLC. The purpose of this study is to find correlations between location of the sample collection sites and amino acid content as well as D/L isomer ratios in order to formulate theories of how different types of environments may affect the abundance and distribution of life forms. Initial analysis of data shows a general lack of or slight correlation between location and amino acid content. Some data appears to contradict the hypothesis that harsher environments would have lower amino acid content than less harsh environments. Further analysis of data is needed to come up with a more conclusive report of the distribution of amino acids in the Atacama Desert.

Insights into microbial involvement in desert varnish formation retrieved from metagenomic analysis.

PubMed

Lang-Yona, Naama; Maier, Stefanie; Macholdt, Dorothea S; Müller-Germann, Isabell; Yordanova, Petya; Rodriguez-Caballero, Emilio; Jochum, Klaus P; Al-Amri, Abdullah; Andreae, Meinrat O; Fröhlich-Nowoisky, Janine; Weber, Bettina

2018-02-28

Desert varnishes are dark rock coatings observed in arid environments and might resemble Mn-rich coatings found on Martian rocks. Their formation mechanism is not fully understood and the possible microbial involvement is under debate. In this study, we applied DNA metagenomic Shotgun sequencing of varnish and surrounding soil to evaluate the composition of the microbial community and its potential metabolic function. We found that the α diversity was lower in varnish compared to soil samples (p value < 0.05), suggesting distinct populations with significantly higher abundance of Actinobacteria, Proteobacteria and Cyanobacteria within the varnish. Additionally, we observed increased levels of transition metal metabolic processes in varnish compared to soil samples. Nevertheless, potentially relevant enzymes for varnish formation were detected at low to insignificant levels in both niches, indicating no current direct microbial involvement in Mn oxidation. This finding is supported by quantitative genomic analysis, elemental analysis, fluorescence imaging and scanning transmission X-ray microscopy. We thus conclude that the distinct microbial communities detected in desert varnish originate from settled Aeolian microbes, which colonized this nutrient-enriched niche, and discuss possible indirect contributions of microorganisms to the formation of desert varnish. © 2018 Society for Applied Microbiology and John Wiley & Sons Ltd.

Desert Farming Benefits from Microbial Potential in Arid Soils and Promotes Diversity and Plant Health

PubMed Central

Köberl, Martina; Müller, Henry; Ramadan, Elshahat M.; Berg, Gabriele

2011-01-01

Background To convert deserts into arable, green landscapes is a global vision, and desert farming is a strong growing area of agriculture world-wide. However, its effect on diversity of soil microbial communities, which are responsible for important ecosystem services like plant health, is still not known. Methodology/Principal Findings We studied the impact of long-term agriculture on desert soil in one of the most prominent examples for organic desert farming in Sekem (Egypt). Using a polyphasic methodological approach to analyse microbial communities in soil as well as associated with cultivated plants, drastic effects caused by 30 years of agriculture were detected. Analysing bacterial fingerprints, we found statistically significant differences between agricultural and native desert soil of about 60%. A pyrosequencing-based analysis of the 16S rRNA gene regions showed higher diversity in agricultural than in desert soil (Shannon diversity indices: 11.21/7.90), and displayed structural differences. The proportion of Firmicutes in field soil was significantly higher (37%) than in the desert (11%). Bacillus and Paenibacillus play the key role: they represented 96% of the antagonists towards phytopathogens, and identical 16S rRNA sequences in the amplicon library and for isolates were detected. The proportion of antagonistic strains was doubled in field in comparison to desert soil (21.6%/12.4%); disease-suppressive bacteria were especially enriched in plant roots. On the opposite, several extremophilic bacterial groups, e.g., Acidimicrobium, Rubellimicrobium and Deinococcus-Thermus, disappeared from soil after agricultural use. The N-fixing Herbaspirillum group only occurred in desert soil. Soil bacterial communities were strongly driven by the a-biotic factors water supply and pH. Conclusions/Significance After long-term farming, a drastic shift in the bacterial communities in desert soil was observed. Bacterial communities in agricultural soil showed a higher diversity and a better ecosystem function for plant health but a loss of extremophilic bacteria. Interestingly, we detected that indigenous desert microorganisms promoted plant health in desert agro-ecosystems. PMID:21912695

Long-Term Effects of Xerophytic Shrub Haloxylon ammodendron Plantations on Soil Properties and Vegetation Dynamics in Northwest China

PubMed Central

Fan, Baoli; Zhang, Aiping; Yang, Yi; Ma, Quanlin; Li, Xuemin; Zhao, Changming

2016-01-01

The xerophytic desert shrub Haloxylon ammodendron (C. A. Mey.) Bunge. is distributed naturally in Asian and African deserts, and is widely used for vegetation restoration in the desert regions of Northern China. However, there are limited long-term chrono-sequence studies on the impact of changed soil properties and vegetation dynamics following establishment of this shrub on mobile sand dunes. In Minqin County, Gansu Province, we investigated soil properties and herbaceous vegetation development of 10, 20, 30, 40, 50-year-old H. ammodendron plantations on mobile sand dunes. Soil sampling at two depths (0–5 and 5–20 cm) under the shrubs determined SOC, nutrition and soil physical characteristics. The results showed that: establishment of H. ammodendron had improved soil physio-chemical properties, increased thickness of soil crusts and coverage of biological soil crusts (BSCs), and promoted development of topsoil over an extended period of 5 decades. Soil texture and soil nutrition improved along the chrono-sequence according to three distinct phases: i) an initial fast development from 0 to 10 years, ii) a stabilizing phase from 10 to 30 years followed by iii) a relatively marked restoration development in 40 and 50-year-old plantations. Meanwhile, herbaceous community coverage also markedly increased in 30-year-old plantations. However, both soil and vegetation restoration were very slow due to low annual precipitation in Minqin county compared to other Northern China sand afforestation sites. Canonical Correspondence Analysis results demonstrated that herbaceous plant development was closely associated with changes in soil texture (increased clay and silt percentage) and availability of soil nutrients. Thus our results indicated that selection of the long-lived shrub H. ammodendron is an essential and effective tool in arid desert re-vegetation. PMID:27992458

How do humans restructure the biodiversity of the Sonoran Desert?

Treesearch

Diane Hope; Corinna Gries; Paige Warren; Madhu Katti; Glenn Stuart; Jake Oleson; Jason Kaye

2005-01-01

We studied patterns of biodiversity across the entire urban, suburban, agricultural, and surrounding Sonoran Desert landscape of central Arizona-Phoenix. A probability-based extensive integrated field inventory was used to survey perennial plants, pollen, birds, and sample soil chemistry, supplemented by monthly or quarterly monitoring of arthropod and bird communities...

Unique Microbial Phylotypes in Namib Desert Dune and Gravel Plain Fairy Circle Soils.

PubMed

van der Walt, Andries J; Johnson, Riegardt M; Cowan, Don A; Seely, Mary; Ramond, Jean-Baptiste

2016-08-01

Fairy circles (FCs) are barren circular patches of soil surrounded by grass species. Their origin is poorly understood. FCs feature in both the gravel plains and the dune fields of the Namib Desert. While a substantial number of hypotheses to explain the origin and/or maintenance of fairy circles have been presented, none are completely consistent with either their properties or their distribution. In this study, we investigated the hypothesis that FC formation in dunes and gravel plains is due to microbial phytopathogenesis. Surface soils from five gravel plain and five dune FCs, together with control soil samples, were analyzed using high-throughput sequencing of bacterial/archaeal (16S rRNA gene) and fungal (internal transcribed spacer [ITS] region) phylogenetic markers. Our analyses showed that gravel plain and dune FC microbial communities are phylogenetically distinct and that FC communities differ from those of adjacent vegetated soils. Furthermore, various soil physicochemical properties, particularly the pH, the Ca, P, Na, and SO4 contents, the soil particle size, and the percentage of carbon, significantly influenced the compositions of dune and gravel plain FC microbial communities, but none were found to segregate FC and vegetated soil communities. Nevertheless, 9 bacterial, 1 archaeal, and 57 fungal phylotypes were identified as FC specific, since they were present within the gravel plain and dune FC soils only, not in the vegetated soils. Some of these FC-specific phylotypes were assigned to taxa known to harbor phytopathogenic microorganisms. This suggests that these FC-specific microbial taxa may be involved in the formation and/or maintenance of Namib Desert FCs. Fairy circles (FCs) are mysterious barren circular patches of soil found within a grass matrix in the dune fields and gravel plains of the Namib Desert. Various hypotheses attempting to explain this phenomenon have been proposed. To date, however, none have been successful in fully explaining the etiology of FCs, particularly since gravel plain FCs have been largely ignored. In this study, we investigated the hypothesis that microorganisms could be involved in the FC phenomenon through phytopathogenesis. We show that the microbial communities in FC and control vegetated soil samples were significantly different. Furthermore, we detected 67 FC-specific microbial phylotypes, i.e., phylotypes present solely in both gravel plain and dune FC soils, some of which were closely related to known phytopathogens. Our results, therefore, demonstrate that microorganisms may play a role in the formation and/or maintenance of Namib Desert FCs, possibly via phytopathogenic activities. Copyright © 2016, American Society for Microbiology. All Rights Reserved.

Regional prediction of carbon isotopes in soil carbonates for Asian dust source tracer

NASA Astrophysics Data System (ADS)

Chen, Bing; Cui, Xinjuan; Wang, Yaqiang

2016-10-01

Dust particles emitted from deserts and semi-arid lands in northern China cause particulate pollution that increases the burden of disease particularly for urban population in East Asia. The stable carbon isotopes (δ13C) of carbonates in soils and dust aerosols in northern China were investigated. We found that the δ13C of carbonates in surface soils in northern China showed clearly the negative correlation (R2 = 0.73) with Normalized Difference Vegetation Index (NDVI). Using Moderate Resolution Imaging Spectroradiometer (MODIS) satellite-derived NDVI, we predicted the regional distribution of δ13C of soil carbonates in deserts, sandy lands, and steppe areas. The predictions show the mean δ13C of -0.4 ± 0.7‰ in soil carbonates in Taklimakan Desert and Gobi Deserts, and the isotope values decrease to -3.3 ± 1.1‰ in sandy lands. The increase in vegetation coverage depletes 13C in soil carbonates, thus the steppe areas are predicted by the lowest δ13C levels (-8.1 ± 1.7‰). The measurements of atmospheric dust samples at eight sites showed that the Asian dust sources were well assigned by the 13C mapping in surface soils. Predicting 13C in large geographical areas with fine resolution offers a cost-effective tracer to monitor dust emissions from sandy lands and steppe areas which show an increasing role in Asian dust loading driven by climate change and human activities.

Cryptogamic communities in biological soil crusts in arid deserts of China: Diversity and their relationships to habitats in different scales

NASA Astrophysics Data System (ADS)

Li, X. R.; He, M. Z.; Li, X. J.; Jia, R. L.

2012-04-01

Biological soil crusts (BSCs) are widespread communities of various diminutive organisms, including cryptogams such as cyanobacteria, algae, lichens and mosses, and other invisible organisms that are closely integrated with particles of topsoil. Few studies have considered their diversity and distribution pattern as related to environmental and climatic factors at different scales - in particular, little is known concerning the factors inducing the differences in crustal floral diversity for arid deserts in China. We investigated the distribution and characteristics of crustal communities with a total of 350 soil samplings in the main desert regions of northern China: the Horqin Sandland, Mu Us Sandland-Ordos Plateau, Tengger-Alxa Plateau, Qaidam Desert and Guerbantunggut Desert, which present a precipitation gradient, reducing from 450 mm in eastern to 80-100 mm in western deserts. The maximum cryptogamic species richness in crustal communities was 66, 42, 56, 22 and 54, respectively, in the above deserts. In general, species richness and biomass of crustal mosses were positive related with precipitation, while that of cyanobacteria and algae, as well as lichens were negative at a landscape scale. The results indicated topsoil physiochemical properties largely influenced the distribution pattern of crustal communities at the regional scale. Fine-textured and gypsum soils and soils with higher pH were favorable for various lichens, which were restricted by soils with higher total salt content. Moss species and biomass were closely related with soil water content rather than other properties, whereas there was higher diversity in cyanobacteria and algae at the site with relatively dry topsoil. In addition, the cover and biomass of mosses was positive correlated with the cover of C3 plants such as xerophytic shrubs due to providing shade. However, cover and biomass of lichens, cyanobacteria and algae were closely correlated with C4 plants, especially annuals, possibly as they created a relative stable and safe site for seed germination and survival in an aeolian environment, and increased carbon and nitrogen input into these nutrient-poor sandy substrates. At a small scale, diversity and biomass of crustal communities were largely determined by surface micro-geomorphology. Complex micro-geomorphology, such as small shrub-soil mounds and different location of stabilized dunes, has created various habitats that facilitate the maintaining of higher species diversity in BSCs due to re-allocation of dustfall deposition and surface water regime. These findings suggested that any disturbances will induce changes in cryptogamic diversity at the small scale. Variation of rainfall regime in future will result in conversion amongst the different types of BSCs, and may contribute to changes in desert ecosystem structure and function. Keywords: cryptogam species; distribution characteristics; precipitation gradient; soil physiochemical properties; different scale; Chinese deserts

Is the Taklimakan Desert Highway Shelterbelt Sustainable to Long-Term Drip Irrigation with High Saline Groundwater?

PubMed Central

Zhang, Jianguo; Xu, Xinwen; Li, Shengyu; Zhao, Ying; Zhang, Afeng; Zhang, Tibin; Jiang, Rui

2016-01-01

Freshwater resources are scarce in desert regions. Highly saline groundwater of different salinity is being used to drip irrigate the Taklimakan Desert Highway Shelterbelt with a double-branch-pipe system controlling the irrigation cycles. In this study, to evaluate the dynamics of soil moisture and salinity under the current irrigation system, soil samples were collected to a 2-m depth in the shelterbelt planted for different years and irrigated with different groundwater salinities, and soil moisture and salinity were analyzed. The results showed that both depletion of soil moisture and increase of topsoil salinity occurred simultaneously during one irrigation cycle. Soil moisture decreased from 27.4% to 2.4% for a 15-day irrigation cycle and from 26.4% to 2.7% for a 10-day-cycle, respectively. Topsoil electrical conductivity (EC) increased from 0.64 to 3.32 dS/m and 0.70 to 3.99 dS/m for these two irrigation cycles. With increased shelterbelt age, profiled average soil moisture (0–200 cm) reduced from 12.8% (1-year) to 7.1% (10-year); however, soil moisture in 0–20-cm increased, while topsoil salinity decreased. In addition, irrigation salinity mainly affected soil salinity in the 0–20-cm range. We conclude that water supply with the double-branch-pipe is a feasible irrigation method for the Taklimakan Desert Highway Shelterbelt, and our findings provide a model for shelterbelt construction and sustainable management when using highly saline water for irrigation in analogous habitats. PMID:27711244

Effects of temporally persistent ant nests of soil protozoan communities and the abundance of morphological types of amoeba

USDA-ARS?s Scientific Manuscript database

We compared soil protozoan communities near ant nests with soil protozoans in reference soils 5m from the edge of any mounds. We sampled three species of Chihuahuan Desert ants that construct nests that persist for more than a decade: a seed harvester, Pogonomymex rugosus, a liquid feeding honey-po...

Post-fire soil nutrient redistribution in northern Chihuahuan Desert

NASA Astrophysics Data System (ADS)

Wang, G.; Li, J. J.; Ravi, S.; Sankey, J. B.; Duke, D.; Gonzales, H. B.; Van Pelt, S.

2016-12-01

The desert grassland in the southwestern US has undergone dramatic land degradation with woody shrub encroachment over the last 150 years. Wind erosion and periodic fires are major drivers of vegetation dynamics in these ecosystems. Due to climate change and anthropogenic disturbances, many drylands are undergoing changes in fire regimes, which can largely alter the nutrient loss rate as well as the soil resource heterogeneity. In this study, we used manipulative field experiments, laboratory and geostatistical analyses to investigate the distribution of fertile islands, nutrient loss rate and spatial variation. Replicated burned and control experimental plots were set up in a desert grassland in northern Chihuahuan Desert in March 2016. Windblown sediments were monitored by multiple MWAC sediment collectors on each plot. Surface soil samples, with their locations accurately recorded (i.e., under shrub, under grass, and bare interspace) were collected twice per year in spring and again in summer after the experimental setup. Our preliminary results show that the spatial heterogeneity of soil C and N in the burned plots has changed notably compared to the control plots. Our results further demonstrated that areas with burned shrubs is most vulnerable to wind erosion, therefore the soil nutrient loss is most significant, almost five times of the nutrient loss rate of bare areas. Interspace bare areas is in the lowest micro-land and some of the surface has caliche, which makes the surface resistant to wind erosion. And areas with burned grass receive the lightest wind erosion and nutrient loss, around one third of the erosion on bare areas, because burned grasses still cover the surface and the dead bodies can eliminate wind erosion to a large extent. Hence, periodic fire in desert grassland favors the evenness distribution of soil nutrients and can retard the shrub encroachment process.

Subcritical Water Extraction of Amino Acids from Atacama Desert Soils

NASA Technical Reports Server (NTRS)

Amashukeli, Xenia; Pelletier, Christine C.; Kirby, James P.; Grunthaner, Frank J.

2007-01-01

Amino acids are considered organic molecular indicators in the search for extant and extinct life in the Solar System. Extraction of these molecules from a particulate solid matrix, such as Martian regolith, will be critical to their in situ detection and analysis. The goals of this study were to optimize a laboratory amino acid extraction protocol by quantitatively measuring the yields of extracted amino acids as a function of liquid water temperature and sample extraction time and to compare the results to the standard HCl vapor- phase hydrolysis yields for the same soil samples. Soil samples from the Yungay region of the Atacama Desert ( Martian regolith analog) were collected during a field study in the summer of 2005. The amino acids ( alanine, aspartic acid, glutamic acid, glycine, serine, and valine) chosen for analysis were present in the samples at concentrations of 1 - 70 parts- per- billion. Subcritical water extraction efficiency was examined over the temperature range of 30 - 325 degrees C, at pressures of 17.2 or 20.0 MPa, and for water- sample contact equilibration times of 0 - 30 min. None of the amino acids were extracted in detectable amounts at 30 degrees C ( at 17.2 MPa), suggesting that amino acids are too strongly bound by the soil matrix to be extracted at such a low temperature. Between 150 degrees C and 250 degrees C ( at 17.2 MPa), the extraction efficiencies of glycine, alanine, and valine were observed to increase with increasing water temperature, consistent with higher solubility at higher temperatures, perhaps due to the decreasing dielectric constant of water. Amino acids were not detected in extracts collected at 325 degrees C ( at 20.0 MPa), probably due to amino acid decomposition at this temperature. The optimal subcritical water extraction conditions for these amino acids from Atacama Desert soils were achieved at 200 degrees C, 17.2 MPa, and a water- sample contact equilibration time of 10 min.

Floral diversity in desert ecosystems: Comparing field sampling to image analyses in assessing species cover

PubMed Central

2013-01-01

Background Developing a quick and reliable technique to estimate floral cover in deserts will assist in monitoring and management. The present attempt was to estimate plant cover in the UAE desert using both digital photography and field sampling. Digital photographs were correlated with field data to estimate floral cover in moderately (Al-Maha) and heavily (DDCR) grazed areas. The Kruskal-Wallis test was also used to assess compatibility between the two techniques within and across grazing intensities and soil substrates. Results Results showed that photographs could be a reliable technique within the sand dune substrate under moderate grazing (r = 0.69). The results were very poorly correlated (r =−0.24) or even inversely proportional (r =−0.48) when performed within DDCR. Overall, Chi-square values for Al-Maha and DDCR were not significant at P > 0.05, indicating similarities between the two methods. At the soil type level, the Kruskal-Wallis analysis was not significant (P > 0.05), except for gravel plains (P < 0.05). Across grazing intensities and soil substrates, the two techniques were in agreement in ranking most plant species, except for Lycium shawii. Conclusions Consequently, the present study has proven that digital photography could not be used reliably to asses floral cover, while further testing is required to support such claim. An image-based sampling approach of plant cover at the species level, across different grazing and substrate variations in desert ecosystems, has its uses, but results are to be cautiously interpreted. PMID:23758667

[Correlation Among Soil Organic Carbon, Soil Inorganic Carbon and the Environmental Factors in a Typical Oasis in the Southern Edge of the Tarim Basin].

PubMed

Gong, Lu; Zhu, Mei-ling; Liu, Zeng-yuan; Zhang, Xue-ni; Xie, Li-na

2016-04-15

We analyzed the differentiation among the environmental factors and soil organic/inorganic carbon contents of irrigated desert soil, brown desert soil, saline soil and aeolian sandy soil by classical statistics methods, and studied the correlation between soil carbon contents and the environmental factor by redundancy analysis (RDA) in a typical oasis of Yutian in the southern edge of the Tarim Basin. The results showed that the average contents of soil organic carbon and soil inorganic carbon were 2.51 g · kg⁻¹ and 25.63 g · kg⁻¹ respectively. The soil organic carbon content of the irrigated desert soil was significantly higher than those of brown desert soil, saline soil and aeolian sandy soil, while the inorganic carbon content of aeolian sandy soil was significantly higher than those of other soil types. The soil moisture and nutrient content were the highest in the irrigated desert soil and the lowest in the aeolian sandy sail. All soil types had high degree of salinization except the irrigated desert soil. The RDA results showed that the impacts of environmental factors on soil carbon contents ranked in order of importance were total nitrogen > available phosphorus > soil moisture > ground water depth > available potassium > pH > total salt. The soil carbon contents correlated extremely significantly with total nitrogen, available phosphorus, soil moisture and ground water depth (P < 0.01), and it correlated significantly with available potassium and pH (P < 0.05). There was no significant correlation between soil carbon contents and other environmental factors (P > 0.05).

Differences in ice nucleation behavior of arable and desert soil dust in deposition nucleation regime

NASA Astrophysics Data System (ADS)

Ullrich, Romy; Vogel, Franziska; Möhler, Ottmar; Höhler, Kristina; Schiebel, Thea

2017-04-01

Soil dust from arid and semi-arid regions is one of the most abundant aerosol types in the atmosphere with emission rates of about 1600 Tg per year (Andreae et al. (2009)). Therewith, soil dust plays an important role for the atmospheric radiative transfer and also for the formation of clouds. Soil dust refers to dust sampled from agricultural used areas, to dust from bare soil as well as to dust from desert regions. By mass-spectrometric measurements of the chemical composition of ice residuals, mineral dust as component of soil dust was found to be the major heterogeneous ice nucleating particle (INP) type (e.g. Cziczo et al. (2013)), in particular in the upper troposphere. Also in laboratory studies the ice nucleation efficiency of the different soil dusts was investigated. It was shown that desert dusts (Ullrich et al. (2017)) as well as soil dusts from arable regions (O'Sullivan et al. (2014), Tobo et al. (2014)) are efficient INP. However, there is still a lack of data for ice nucleation on soil dusts for temperatures below about 220 K. With the AIDA (Aerosol Interactions and Dynamics in the Atmosphere) cloud chamber, we are able to characterize the ice nucleation efficiency for different aerosol types to temperatures down to 180 K and high ice supersaturations. In order to extend the already existing AIDA data base for deposition nucleation on desert dusts and agricultural soil dusts, new experiments were done in the upper tropospheric temperature regime. This contribution will show the results of the new experiments with desert dust in comparison to existing data for higher temperatures. The first data analysis confirms the temperature dependent trend of the ice nucleation activity as discussed and parameterized in a recent paper by Ullrich et al. (2017). Furthermore, the update and extension of the recently published parameterization of deposition nucleation for desert dust to lower temperatures will be discussed. The experiments with agricultural soil dust will be compared to existing AIDA experiments at higher temperatures published by Steinke et al. (2016). Finally, the ice nucleation activity of both desert dust and agricultural soil dust will be compared for the upper tropospheric temperature regime. Andreae et al. (2009), Sources and Nature of Atmospheric Aerosols, in Aerosol Pollution Impact on Precipitation - A Scientific Review, Ch.3, Springer Netherlands, 45-89 Cziczo et al. (2013), Clarifying the Dominant Sources and Mechanisms of Cirrus Cloud Formation, Science, 340, 1320-1324 O'Sullivan et al. (2014), Ice nucleation by fertile soil dusts: relative importance of mineral and biogenic components, Atmos. Chem. Phys., 14, 1853-1867 Steinke et al. (2016), Ice nucleation activity of agricultural soil dust aerosols from Mongolia, Argentina and Germany, J. Geophys. Res., 121 Tobo et al. (2014), Organic matter matters for ice nuclei of agricultural soil origin, Atmos. Chem. Phys., 14, 8521-8531 Ullrich et al. (2017), A new ice nucleation active site parametrization for desert dust and soot, J. Atmos. Sci., in press

Soil fertility in deserts: a review on the influence of biological soil crusts and the effect of soil surface disturbance on nutrient inputs and losses

USGS Publications Warehouse

Reynolds, R.; Phillips, S.; Duniway, M.; Belnap, J.

2003-01-01

Sources of desert soil fertility include parent material weathering, aeolian deposition, and on-site C and N biotic fixation. While parent materials provide many soil nutrients, aeolian deposition can provide up to 75% of plant-essential nutrients including N, P, K, Mg, Na, Mn, Cu, and Fe. Soil surface biota are often sticky, and help retain wind-deposited nutrients, as well as providing much of the N inputs. Carbon inputs are from both plants and soil surface biota. Most desert soils are protected by cyanobacterial-lichen-moss soil crusts, chemical crusts and/or desert pavement. Experimental disturbances applied in US deserts show disruption of soil surfaces result in decreased N and C inputs from soil biota by up to 100%. The ability to glue aeolian deposits in place is compromised, and underlying soils are exposed to erosion. The ability to withstand wind increases with biological and physical soil crust development. While most undisturbed sites show little sediment production, disturbance by vehicles or livestock produce up to 36 times more sediment production, with soil movement initiated at wind velocities well below commonly-occurring wind speeds. Soil fines and flora are often concentrated in the top 3 mm of the soil surface. Winds across disturbed areas can quickly remove this material from the soil surface, thereby potentially removing much of current and future soil fertility. Thus, disturbances of desert soil surfaces can both reduce fertility inputs and accelerate fertility losses.

Characterizing dust aerosols in the atmospheric boundary layer over the deserts in Northwest China: monitoring network and field observation

NASA Astrophysics Data System (ADS)

He, Q.; Matimin, A.; Yang, X.

2016-12-01

TheTaklimakan, Gurbantunggut and BadainJaran Deserts with the total area of 43.8×104 km2 in Northwest China are the major dust emission sources in Central Asia. Understanding Central Asian dust emissions and the interaction with the atmospheric boundary layer has an important implication for regional and global climate and environment changes. In order to explore these scientific issues, a monitoring network of 63 sites was established over the vast deserts (Taklimakan Desert, Gurbantunggut Desert and Badain Jaran Desert) in Northwest China for the comprehensive measurements of dust aerosol emission, transport and deposition as well as the atmospheric boundary layer including the meteorological parameters of boundary layer, surface radiation, surface heat fluxes, soil parameters, dust aerosol properties, water vapor profiles, and dust emission. Based on the monitoring network, the field experiments have been conducted to characterize dust aerosols and the atmospheric boundary layer over the deserts. The experiment observation indicated that depth of the convective boundary layer can reach 5000m on summer afternoons. In desert regions, the diurnal mean net radiation was effected significantly by dust weather, and sensible heat was much greater than latent heat accounting about 40-50% in the heat balance of desert. The surface soil and dust size distributions of Northwest China Deserts were obtained through widely collecting samples, results showed that the dominant dust particle size was PM100within 80m height, on average accounting for 60-80% of the samples, with 0.9-2.5% for PM0-2.5, 3.5-7.0% for PM0-10 and 5.0-14.0% for PM0-20. The time dust emission of Taklimakan Desert, Gurbantunggut Desert and Badain Jaran Desert accounted for 0.48%, 7.3%×10-5and 1.9% of the total time within a year, and the threshold friction velocity for dust emission were 0.22-1.06m/s, 0.29-1.5m/s and 0.21-0.59m/s, respectively.

Factors influencing the rates, processes and magnitude of accumulation of carbon in desert soils

NASA Technical Reports Server (NTRS)

Mcfadden, Leslie D.

1994-01-01

This report summarizes research funded through NASA's Soil Landscape Climate Program which includes studies of the systematics of carbon storage and flux in the terrestrial environment, specifically terrestrial soils. Efforts focussed on the nature of carbon behavior in arid environments, where the majority of the carbon is present as inorganic carbon stored as pedogenic carbonate in desert calcic soils. Studies were supported of soils in two areas of western North America's major deserts: the Mojave Desert and the Chihuahuan Desert. Part 1 of this report summarizes the results of research conducted in the area of the Providence Mountains, California in the eastern Mojave Desert. Part 2 of this report summarizes the results of research in the Sevilleta Wildlife Refuge in central New Mexico, one of the sites of the UMN Biology Department's Long Term Ecological Research.

Monitoring ecosystem quality and function in arid settings of the Mojave Desert

USGS Publications Warehouse

Belnap, Jayne; Webb, Robert H.; Miller, Mark E.; Miller, David M.; DeFalco, Lesley A.; Medica, Philip A.; Brooks, Matthew L.; Esque, Todd C.; Bedford, Dave

2008-01-01

Monitoring ecosystem quality and function in the Mojave Desert is both a requirement of state and Federal government agencies and a means for determining potential long-term changes induced by climatic fluctuations and land use. Because it is not feasible to measure every attribute and process in the desert ecosystem, the choice of what to measure and where to measure it is the most important starting point of any monitoring program. In the Mojave Desert, ecosystem function is strongly influenced by both abiotic and biotic factors, and an understanding of the temporal and spatial variability induced by climate and landform development is needed to determine where site-specific measurements should be made. We review a wide variety of techniques for sampling, assessing, and measuring climatic variables, desert soils, biological soil crusts, annual and perennial vegetation, reptiles, and small mammals. The complete array of ecosystem attributes and processes that we describe are unlikely to be measured or monitored at any given location, but the array of possibilities allows for the development of specific monitoring protocols, which can be tailored to suit the needs of land-management agencies.

EFFECTS OF REPEATED DROUGHTS ON SOIL MICROARTHROPOD COMMUNITIES IN THE NORTHERN CHIHUHUAN DESERT

EPA Science Inventory

Soil microarthropods were sampled in plots centered on creosotebushes(Larrea tridentata) and in plots centered on mesquite(Prosopis glandulosa) coppice dunes. Nine plots in each area were covered by rain-out shelters with greenhouse plastic roofs which excluded natural rainfall a...

Soil texture drives responses of soil respiration to precipitation pulses in the sonoran desert: Implications for climate change

USGS Publications Warehouse

Cable, J.M.; Ogle, K.; Williams, D.G.; Weltzin, J.F.; Huxman, T. E.

2008-01-01

Climate change predictions for the desert southwestern U.S. are for shifts in precipitation patterns. The impacts of climate change may be significant, because desert soil processes are strongly controlled by precipitation inputs ('pulses') via their effect on soil water availability. This study examined the response of soil respiration-an important biological process that affects soil carbon (C) storage-to variation in pulses representative of climate change scenarios for the Sonoran Desert. Because deserts are mosaics of different plant cover types and soil textures-which create patchiness in soil respiration-we examined how these landscape characteristics interact to affect the response of soil respiration to pulses. Pulses were applied to experimental plots of bare and vegetated soil on contrasting soil textures typical of Sonoran Desert grasslands. The data were analyzed within a Bayesian framework to: (1) determine pulse size and antecedent moisture (soil moisture prior to the pulse) effects on soil respiration, (2) quantify soil texture (coarse vs. fine) and cover type (bare vs. vegetated) effects on the response of soil respiration and its components (plant vs. microbial) to pulses, and (3) explore the relationship between long-term variation in pulse regimes and seasonal soil respiration. Regarding objective (1), larger pulses resulted in higher respiration rates, particularly from vegetated fine-textured soil, and dry antecedent conditions amplified respiration responses to pulses (wet antecedent conditions dampened the pulse response). Regarding (2), autotrophic (plant) activity was a significant source (???60%) of respiration and was more sensitive to pulses on coarse- versus fine-textured soils. The sensitivity of heterotrophic (microbial) respiration to pulses was highly dependent on antecedent soil water. Regarding (3), seasonal soil respiration was predicted to increase with both growing season precipitation and mean pulse size (but only for pulses between 7 and 25 mm). Thus, the heterogeneity of the desert landscape and the timing or the number of medium-sized pulses is expected to significantly impact desert soil C loss with climate change. ?? 2008 Springer Science+Business Media, LLC.

Biophysical Controls over Carbon and Nitrogen Stocks in Desert Playa Wetlands

NASA Astrophysics Data System (ADS)

McKenna, O. P.; Sala, O. E.

2014-12-01

Playas are ephemeral desert wetlands situated at the bottom of closed catchments. Desert playas in the Southwestern US have not been intensively studied despite their potential importance for the functioning of desert ecosystems. We want to know which geomorphic and ecological variables control of the stock size of soil organic carbon, and soil total nitrogen in playas. We hypothesize that the magnitude of carbon and nitrogen stocks depends on: (a) catchment size, (b) catchment slope, (d) catchment vegetation cover, (e) bare-ground patch size, and (f) catchment soil texture. We chose thirty playas from across the Jornada Basin (Las Cruces, NM) ranging from 0.5-60ha in area and with varying catchment characteristics. We used the available 5m digital elevation map (DEM) to calculate the catchment size and catchment slope for these thirty playas. We measured percent cover, and patch size using the point-intercept method with three 10m transects in each catchment. We used the Bouyoucos-hydrometer soil particle analysis to determine catchment soil texture. Stocks of organic carbon and nitrogen were measured from soil samples at four depths (0-10 cm, 10-30 cm, 30-60 cm, 60-100 cm) using C/N combustion analysis. In terms of nitrogen and organic carbon storage, we found soil nitrogen values in the top 10cm ranging from 41.963-214.365 gN/m2, and soil organic carbon values in the top 10cm ranging from 594.339-2375.326 gC/m2. The results of a multiple regression analysis show a positive relationship between catchment slope and both organic carbon and nitrogen stock size (nitrogen: y= 56.801 +47.053, R2=0.621; organic carbon: y= 683.200 + 499.290x, R2= 0.536). These data support our hypothesis that catchment slope is one of factors controlling carbon and nitrogen stock in desert playas. We also applied our model to the 69 other playas of the Jornada Basin and estimated stock sizes (0-10cm) between 415.07-447.97 Mg for total soil nitrogen and 4627.99-5043.51 Mg for soil organic carbon.

Colonization patterns of soil microbial communities in the Atacama Desert.

PubMed

Crits-Christoph, Alexander; Robinson, Courtney K; Barnum, Tyler; Fricke, W Florian; Davila, Alfonso F; Jedynak, Bruno; McKay, Christopher P; Diruggiero, Jocelyne

2013-11-20

The Atacama Desert is one of the driest deserts in the world and its soil, with extremely low moisture, organic carbon content, and oxidizing conditions, is considered to be at the dry limit for life. Analyses of high throughput DNA sequence data revealed that bacterial communities from six geographic locations in the hyper-arid core and along a North-South moisture gradient were structurally and phylogenetically distinct (ANOVA test for observed operating taxonomic units at 97% similarity (OTU0.03), P <0.001) and that communities from locations in the hyper-arid zone displayed the lowest levels of diversity. We found bacterial taxa similar to those found in other arid soil communities with an abundance of Rubrobacterales, Actinomycetales, Acidimicrobiales, and a number of families from the Thermoleophilia. The extremely low abundance of Firmicutes indicated that most bacteria in the soil were in the form of vegetative cells. Integrating molecular data with climate and soil geochemistry, we found that air relative humidity (RH) and soil conductivity significantly correlated with microbial communities' diversity metrics (least squares linear regression for observed OTU0.03 and air RH and soil conductivity, P <0.001; UniFrac PCoA Spearman's correlation for air RH and soil conductivity, P <0.0001), indicating that water availability and salt content are key factors in shaping the Atacama soil microbiome. Mineralization studies showed communities actively metabolizing in all soil samples, with increased rates in soils from the southern locations. Our results suggest that microorganisms in the driest soils of the Atacama Desert are in a state of stasis for most of the time, but can potentially metabolize if presented with liquid water for a sufficient duration. Over geological time, rare rain events and physicochemical factors potentially played a major role in selecting micro-organisms that are most adapted to extreme desiccating conditions.

Colonization patterns of soil microbial communities in the Atacama Desert

PubMed Central

2013-01-01

Background The Atacama Desert is one of the driest deserts in the world and its soil, with extremely low moisture, organic carbon content, and oxidizing conditions, is considered to be at the dry limit for life. Results Analyses of high throughput DNA sequence data revealed that bacterial communities from six geographic locations in the hyper-arid core and along a North-South moisture gradient were structurally and phylogenetically distinct (ANOVA test for observed operating taxonomic units at 97% similarity (OTU0.03), P <0.001) and that communities from locations in the hyper-arid zone displayed the lowest levels of diversity. We found bacterial taxa similar to those found in other arid soil communities with an abundance of Rubrobacterales, Actinomycetales, Acidimicrobiales, and a number of families from the Thermoleophilia. The extremely low abundance of Firmicutes indicated that most bacteria in the soil were in the form of vegetative cells. Integrating molecular data with climate and soil geochemistry, we found that air relative humidity (RH) and soil conductivity significantly correlated with microbial communities’ diversity metrics (least squares linear regression for observed OTU0.03 and air RH and soil conductivity, P <0.001; UniFrac PCoA Spearman’s correlation for air RH and soil conductivity, P <0.0001), indicating that water availability and salt content are key factors in shaping the Atacama soil microbiome. Mineralization studies showed communities actively metabolizing in all soil samples, with increased rates in soils from the southern locations. Conclusions Our results suggest that microorganisms in the driest soils of the Atacama Desert are in a state of stasis for most of the time, but can potentially metabolize if presented with liquid water for a sufficient duration. Over geological time, rare rain events and physicochemical factors potentially played a major role in selecting micro-organisms that are most adapted to extreme desiccating conditions. PMID:24451153

Measuring Low Concentrations of Liquid Water in Soil

NASA Technical Reports Server (NTRS)

Buehler, Martin

2009-01-01

An apparatus has been developed for measuring the low concentrations of liquid water and ice in relatively dry soil samples. Designed as a prototype of instruments for measuring the liquidwater and ice contents of Lunar and Martian soils, the apparatus could also be applied similarly to terrestrial desert soils and sands. The apparatus is a special-purpose impedance spectrometer: Its design is based on the fact that the electrical behavior of a typical soil sample is well approximated by a network of resistors and capacitors in which resistances decrease and capacitances increase (and, hence, the magnitude of impedance decreases) with increasing water content.

Carbon stock and its responses to climate change in Central Asia.

PubMed

Li, Chaofan; Zhang, Chi; Luo, Geping; Chen, Xi; Maisupova, Bagila; Madaminov, Abdullo A; Han, Qifei; Djenbaev, Bekmamat M

2015-05-01

Central Asia has a land area of 5.6 × 10(6) km(2) and contains 80-90% of the world's temperate deserts. Yet it is one of the least characterized areas in the estimation of the global carbon (C) stock/balance. This study assessed the sizes and spatiotemporal patterns of C pools in Central Asia using both inventory (based on 353 biomass and 284 soil samples) and process-based modeling approaches. The results showed that the C stock in Central Asia was 31.34-34.16 Pg in the top 1-m soil with another 10.42-11.43 Pg stored in deep soil (1-3 m) of the temperate deserts. They amounted to 18-24% of the global C stock in deserts and dry shrublands. The C stock was comparable to that of the neighboring regions in Eurasia or major drylands around the world (e.g. Australia). However, 90% of Central Asia C pool was stored in soil, and the fraction was much higher than in other regions. Compared to hot deserts of the world, the temperate deserts in Central Asia had relatively high soil organic carbon density. The C stock in Central Asia is under threat from dramatic climate change. During a decadal drought between 1998 and 2008, which was possibly related to protracted La Niña episodes, the dryland lost approximately 0.46 Pg C from 1979 to 2011. The largest C losses were found in northern Kazakhstan, where annual precipitation declined at a rate of 90 mm decade(-1) . The regional C dynamics were mainly determined by changes in the vegetation C pool, and the SOC pool was stable due to the balance between reduced plant-derived C influx and inhibited respiration. © 2015 John Wiley & Sons Ltd.

Climate and soil salinity in the deserts of Central Asia

NASA Astrophysics Data System (ADS)

Pankova, E. I.; Konyushkova, M. V.

2013-07-01

A comparative analysis of climatic and soil salinity characteristics of the deserts of Central Asia, including deserts of the Turan Depression, the Gobi Desert, and deserts of the Dzungar and Tarim depressions was performed. The climatic characteristics—the degree of aridity, the degree of continentality, and the amount and regime of precipitation—are different in these deserts. No direct relationships between the areas occupied by the automorphic salt-affected soils and the aridity of the climate are observed in the studied regions. In the automorphic landscapes of Asian deserts, the degree and chemistry of the soil salinization and the distribution of salt-affected soils are controlled by the history of the particular territories rather than by their modern climatic conditions. The presence and properties of the salt-bearing rocks and the eolian migration of salts play the most significant role. The deficit of moisture in the modern climate favors the preservation of salt accumulations in places of their origin. The specific features of the climate, including the regime of precipitation, affect the redistribution of salts in the profiles of automorphic salt-affected soils. An increase in the degree of climatic continentality is accompanied by the decrease in the intensity of weathering and initial accumulation of salts. A different situation is observed in the soils of hydromorphic desert landscapes, in which the degree of salinity of the surface horizons and the area occupied by salt-affected soils are directly influenced by the modern climatic conditions.

Bacterial Diversity within the Extreme Arid Atacama Desert Soils of the Yungay Region, Chile

NASA Astrophysics Data System (ADS)

Connon, S. A.; Lester, E. D.; Shafaat, H. S.; Obenhuber, D. C.; Ponce, A.

2006-12-01

Surface and subsurface soil samples analyzed for this study were collected from the hyper-arid Yungay region of the Atacama Desert, Chile. This is the first report of microbial diversity from DNA extracted directly from these extremely desiccated soils. Our data shows that 94% of the 16S rRNA genes cloned from these soils belong to the Actinobacteria phylum. A 24-hour time course series showed a diurnal water activity (aw) cycle that peaked at 0.52 in the early predawn hours, and ranged from 0.08 0.01 during the day. All measured water activity values were below the level required for microbial growth or enzyme activity. Total organic carbon (TOC) levels in this region were just above the limits of detection and ranged from 220 660 μg/g of soil. Phospholipid fatty acid (PLFA) levels indicated cellular biomass ranging from 2 ×105 to 7 ×106 cell equivalents per gram of soil. The culturable counts were low with most samples showing no growth on standard plates of R2A medium; the highest single count was 47 colony forming units (CFU) per gram.

Cyanobacterial Diversity in Biological Soil Crusts along a Precipitation Gradient, Northwest Negev Desert, Israel.

PubMed

Hagemann, Martin; Henneberg, Manja; Felde, Vincent J M N L; Drahorad, Sylvie L; Berkowicz, Simon M; Felix-Henningsen, Peter; Kaplan, Aaron

2015-07-01

Cyanobacteria occur worldwide but play an important role in the formation and primary activity of biological soil crusts (BSCs) in arid and semi-arid ecosystems. The cyanobacterial diversity in BSCs of the northwest Negev desert of Israel was surveyed at three fixed sampling stations situated along a precipitation gradient in the years 2010 to 2012. The three stations also are characterized by marked differences in soil features such as soil carbon, nitrogen, or electrical conductivity. The cyanobacterial biodiversity was analyzed by sequencing inserts of clone libraries harboring partial 16S rRNA gene sequences obtained with cyanobacteria-specific primers. Filamentous, non-diazotrophic strains (subsection III), particularly Microcoleus-like, dominated the cyanobacterial community (30% proportion) in all years. Specific cyanobacterial groups showed increased (e.g., Chroococcidiopsis, Leptolyngbya, and Nostoc strains) or decreased (e.g., unicellular strains belonging to the subsection I and Scytonema strains) abundances with declining water availability at the most arid, southern station, whereas many cyanobacterial strains were frequently found in the soils of all three stations. The cyanobacterial diversity at the three sampling stations appears dependent on the available precipitation, whereas the differences in soil chemistry were of lower importance.

Oxygen-17 anomaly in soil nitrate: A new precipitation proxy for desert landscapes

NASA Astrophysics Data System (ADS)

Wang, Fan; Ge, Wensheng; Luo, Hao; Seo, Ji-Hye; Michalski, Greg

2016-03-01

The nitrogen cycle in desert soil ecosystems is particularly sensitive to changes in precipitation, even of relatively small magnitude and short duration, because it is already under water stress. This suggests that desert soils may have preserved past evidence of small variations in continental precipitation. We have measured nitrate (NO3-) concentrations in soils from the Atacama (Chile), Kumtag (China), Mojave (US), and Thar (India) deserts, and stable nitrogen and oxygen isotope (15N, 17O, and 18O) abundances of the soil NO3-. 17O anomalies (Δ17O), the deviations from the mass-independent isotopic fractionation, were detected in soil NO3- from almost all sites of these four deserts. There was a strong negative correlation between the mean annual precipitation (MAP) and soil NO3- Δ17O values (Δ

Spectral Exploration of Calcium Accumulation in Organic Matter in Gray Desert Soil from Northwest China

PubMed Central

Wang, Ping; Ma, Yucui; Wang, Xihe; Jiang, Hong; Liu, Hua; Ran, Wei; Shen, Qirong

2016-01-01

Little attention has been paid to the accumulation of soil organic matter (SOM) in the fringes of the mid-latitude desert. In this paper, soil samples from a long-term field experiment conducted from 1990 to 2013 at a research station in Urumqi, China by different fertilizer treatments, were used to determine soil properties and soil dissolved organic matter (DOM) by chemical analysis, fluorescence excitation emission matrix (EEM) spectroscopy, and high resolution-transmission electron microscopy (HR-TEM). The binding features of DOM under the addition of Ca2+ were analyzed using a two-dimensional (2D) Fourier transform infrared (FTIR) spectrometer further to explore the response of the DOM to increasing concentrations of Ca2+. Long-term application of chemical fertilizers and goat manure increased soil organic carbon (SOC) by 1.34- and 1.86-fold, respectively, relative to the non-fertilized control (8.95g.kg-1). Compared with the control, application of chemical fertilizers and manure significantly increased the concentrations of Ca, Mg, Si, humic and fulvic acid-like substances in DOM but decreased the amounts of trivalent metals (Al and Fe) and protein-like substances. Although crystalline Al/Fe nanoparticles and amorphous or short-range-order Si/Al nanoparticles existed in all DOM samples, crystalline Ca/Si nanoparticles were predominant in the samples treated with goat manure. Although organic matter and Si-O-containing nanoparticles were involved in the binding of Ca2+ to DOM, application of chemical fertilizers weakened Ca2+ association with components of the amide II group (1510 cm-1) and Si-O linkage (1080 cm-1), whereas application of goat manure enhanced the affinity of Ca2+ for Si-O linkage. Our results suggested that the enrichment of Ca in gray desert soil possibly helps accumulate SOM by forming crystalline Ca/Si nanoparticles in addition to Ca2+ and organic matter complexes. PMID:26751962

Spectral Exploration of Calcium Accumulation in Organic Matter in Gray Desert Soil from Northwest China.

PubMed

Wang, Ping; Ma, Yucui; Wang, Xihe; Jiang, Hong; Liu, Hua; Ran, Wei; Shen, Qirong

2016-01-01

Little attention has been paid to the accumulation of soil organic matter (SOM) in the fringes of the mid-latitude desert. In this paper, soil samples from a long-term field experiment conducted from 1990 to 2013 at a research station in Urumqi, China by different fertilizer treatments, were used to determine soil properties and soil dissolved organic matter (DOM) by chemical analysis, fluorescence excitation emission matrix (EEM) spectroscopy, and high resolution-transmission electron microscopy (HR-TEM). The binding features of DOM under the addition of Ca(2+) were analyzed using a two-dimensional (2D) Fourier transform infrared (FTIR) spectrometer further to explore the response of the DOM to increasing concentrations of Ca(2+). Long-term application of chemical fertilizers and goat manure increased soil organic carbon (SOC) by 1.34- and 1.86-fold, respectively, relative to the non-fertilized control (8.95 g.kg(-1)). Compared with the control, application of chemical fertilizers and manure significantly increased the concentrations of Ca, Mg, Si, humic and fulvic acid-like substances in DOM but decreased the amounts of trivalent metals (Al and Fe) and protein-like substances. Although crystalline Al/Fe nanoparticles and amorphous or short-range-order Si/Al nanoparticles existed in all DOM samples, crystalline Ca/Si nanoparticles were predominant in the samples treated with goat manure. Although organic matter and Si-O-containing nanoparticles were involved in the binding of Ca(2+) to DOM, application of chemical fertilizers weakened Ca(2+) association with components of the amide II group (1510 cm(-1)) and Si-O linkage (1080 cm(-1)), whereas application of goat manure enhanced the affinity of Ca(2+) for Si-O linkage. Our results suggested that the enrichment of Ca in gray desert soil possibly helps accumulate SOM by forming crystalline Ca/Si nanoparticles in addition to Ca(2+) and organic matter complexes.

Effects of altered temperature and precipitation on desert protozoa associated with biological soil crusts

USGS Publications Warehouse

Darby, B.J.; Housman, D.C.; Zaki, A.M.; Shamout, Y.; Adl, S.M.; Belnap, J.; Neher, D.A.

2006-01-01

Biological soil crusts are diverse assemblages of bacteria, cyanobacteria, algae, fungi, lichens, and mosses that cover much of arid land soils. The objective of this study was to quantify protozoa associated with biological soil crusts and test the response of protozoa to increased temperature and precipitation as is predicted by some global climate models. Protozoa were more abundant when associated with cyanobacteria/lichen crusts than with cyanobacteria crusts alone. Amoebae, flagellates, and ciliates originating from the Colorado Plateau desert (cool desert, primarily winter precipitation) declined 50-, 10-, and 100-fold, respectively, when moved in field mesocosms to the Chihuahuan Desert (hot desert, primarily summer rain). However, this was not observed in protozoa collected from the Chihuahuan Desert and moved to the Sonoran desert (hot desert, also summer rain, but warmer than Chihuahuan Desert). Protozoa in culture began to encyst at 37??C. Cysts survived the upper end of daily temperatures (37-55??C), and could be stimulated to excyst if temperatures were reduced to 15??C or lower. Results from this study suggest that cool desert protozoa are influenced negatively by increased summer precipitation during excessive summer temperatures, and that desert protozoa may be adapted to a specific desert's temperature and precipitation regime. ?? 2006 by the International Society of Protistologists.

Effects of Fire on the Plant-Soil Interactions in Northern Chihuahuan Desert

NASA Astrophysics Data System (ADS)

Wang, G.; Li, J. J.; Ravi, S.; Sankey, J. B.; Theiling, B. P.; Dukes, D.; Gonzales, H. B.; Van Pelt, R. S.

2017-12-01

Desert grasslands in the southwestern US have undergone dramatic land degradation with woody shrub encroachment over the last 150 years. Soil carbon (C), nitrogen (N) and other soil nutrients are redistributed among shrubs, grasses, and bare interspaces during encroachment. Several studies suggest that periodic fire favors the homogenization of soil resources and can provide a certain form of reversibility for the shrub-grass transition. In this study, we used manipulative field experiments to investigate the influence of fire on the isotope composition of C (δ13C) and N (δ15N) in bare interspace, grass and shrub microsites. Replicated burned and control (unburned) experimental plots (5 m × 5 m) were set up in a desert grassland in northern Chihuahuan Desert in March 2016. In each plot, a total of 50 randomly-distributed surface soil samples, with their microsite types accurately recorded, were collected twice per year in March and June (before and after the windy season). δ13C and δ15N in the soil samples were analyzed. Our results show that fire has changed soil δ13C and δ15N after two windy seasons, especially in the shrub microsite. For example, δ13C increased from -18.8‰ to -17.0‰ after a windy season in soils under burned shrub canopies, and increased to -14.3‰ in Mar. 2017, one year after the prescribed fire. In contrast, it changed notably from -14.6‰ to -17.6‰ under shrub canopies in the control plot during the same period of time. For soil δ15N, it decreased slightly from 6.1‰ to 5.6‰ within a year after the prescribed fire in shrub microsite, and a comparable decline was also observed in the same type of microsite of the control plot. Because the average δ13C value of C4 plant tissue (-12‰) is distinct from C3 plants (-26‰), the increase of soil δ13C suggests that the relative contribution of soil organic matter under shrub canopies from shrubs (C3 plants) decreased after a burning event compared to grasses (C4 plants). The insignificant change of soil δ15N in shrub microsite indicates that soil mineralization rates and plant N uptake under shrub canopies may not be substantially altered by the prescribed fire. Our results highlighted that fire can change the resource interactions between soil and plants, which may further affect the shrub encroachment process as well as the dynamics of grassland-shrubland ecosystem.

Extensive goniometric spectral measurements at desert sites for military engineering

NASA Astrophysics Data System (ADS)

Berry, T. E.; Morgan, J. C.; Furey, J. S.; DeMoss, T. A.; Kelley, J. R.; McKenna, J. R.

2012-10-01

Remote-sensing technology designed to exploit disturbed earth signatures has become extremely useful in the detection of disturbed soil in military areas of operation. Soil reflectance can be exploited for this purpose and is dependent on atmospheric conditions. An understanding of the in situ soil background is vital to any type of change detection. Researchers from the Engineering Research and Development Center (ERDC) conducted OCONUS soil spectral measurements at ten sites in Afghanistan from July to November, 2011. Sampling sites were chosen on the basis of geomorphic setting, surface-soil characteristics, and field-expedient conditions. Goniometric spectral measurements at these sites have provided high quality bi-directional reflectance data, and their analyses are presented in the context of threat recognition and discrimination. These data can also provide the basis for BDRF model validation. Most spectral data were acquired under ambient solar lighting, but other data were collected at night and under artificial illumination conditions. Bidirectional measurements of soil reflectance in the VIS/NIR and SWIR were taken using the University of Lethbridge Goniometer System (ULGS) at dawn, mid-day, dusk and after sunset with a light. Soil surface roughness and reflectance varied, depending on the presence of desert varnish and desert pavement at some sites. Sun angle and dust and smoke in the atmosphere impacted soil reflectance and noise in the SWIR part of the light spectrum, in particular. The presence of minerals such as calcium carbonate, gypsum, and oxidized iron in the subsurface directly impacted reflectance measurements in disturbed soil.

Soil respiration sensitivities to water and temperature in a revegetated desert

NASA Astrophysics Data System (ADS)

Zhang, Zhi-Shan; Dong, Xue-Jun; Xu, Bing-Xin; Chen, Yong-Le; Zhao, Yang; Gao, Yan-Hong; Hu, Yi-Gang; Huang, Lei

2015-04-01

Soil respiration in water-limited ecosystems is affected intricately by soil water content (SWC), temperature, and soil properties. Eight sites on sand-fixed dunes that revegetated in different years since 1950s, with several topographical positions and various biological soil crusts (BSCs) and soil properties, were selected, as well as a moving sand dune (MSD) and a reference steppe in the Tengger Desert of China. Intact soil samples of 20 cm in depth were taken and incubated randomly at 12 levels of SWC (0 to 0.4 m3 m-3) and at 9 levels of temperature (5 to 45°C) in a growth chamber; additionally, cryptogamic and microbial respirations (RM) were measured. Total soil respiration (RT, including cryptogamic, microbial, and root respiration) was measured for 2 years at the MSD and five sites of sand-fixed dunes. The relationship between RM and SWC under the optimal SWC condition (0.25 m3 m-3) is linear, as is the entire range of RT and SWC. The slope of linear function describes sensitivity of soil respiration to water (SRW) and reflects to soil water availability, which is related significantly to soil physical properties, BSCs, and soil chemical properties, in decreasing importance. Inversely, Q10 for RM is related significantly to abovementioned factors in increasing importance. However, Q10 for RT and respiration rate at 20°C are related significantly to soil texture and depth of BSCs and subsoil only. In conclusion, through affecting SRW, soil physical properties produce significant influences on soil respiration, especially for RT. This indicates that a definition of the biophysical meaning of SRW is necessary, considering the water-limited and coarse-textured soil in most desert ecosystems.

Cross-biome metagenomic analyses of soil microbial communities and their functional attributes.

PubMed

Fierer, Noah; Leff, Jonathan W; Adams, Byron J; Nielsen, Uffe N; Bates, Scott Thomas; Lauber, Christian L; Owens, Sarah; Gilbert, Jack A; Wall, Diana H; Caporaso, J Gregory

2012-12-26

For centuries ecologists have studied how the diversity and functional traits of plant and animal communities vary across biomes. In contrast, we have only just begun exploring similar questions for soil microbial communities despite soil microbes being the dominant engines of biogeochemical cycles and a major pool of living biomass in terrestrial ecosystems. We used metagenomic sequencing to compare the composition and functional attributes of 16 soil microbial communities collected from cold deserts, hot deserts, forests, grasslands, and tundra. Those communities found in plant-free cold desert soils typically had the lowest levels of functional diversity (diversity of protein-coding gene categories) and the lowest levels of phylogenetic and taxonomic diversity. Across all soils, functional beta diversity was strongly correlated with taxonomic and phylogenetic beta diversity; the desert microbial communities were clearly distinct from the nondesert communities regardless of the metric used. The desert communities had higher relative abundances of genes associated with osmoregulation and dormancy, but lower relative abundances of genes associated with nutrient cycling and the catabolism of plant-derived organic compounds. Antibiotic resistance genes were consistently threefold less abundant in the desert soils than in the nondesert soils, suggesting that abiotic conditions, not competitive interactions, are more important in shaping the desert microbial communities. As the most comprehensive survey of soil taxonomic, phylogenetic, and functional diversity to date, this study demonstrates that metagenomic approaches can be used to build a predictive understanding of how microbial diversity and function vary across terrestrial biomes.

Trace elements assessment in agricultural and desert soils of Aswan area, south Egypt: Geochemical characteristics and environmental impacts

NASA Astrophysics Data System (ADS)

Darwish, Mohamed Abdallah Gad; Pöllmann, Hebert

2015-12-01

Determination of chemical elements, Al, Cd, Co, Cr, Cu, Fe, Li, Mn, Mo, Ni, P, Pb, Sc, Sr, Ti, Y, and Zn have been performed in agricultural and desert soils and alfalfa (Medicago sativa) at Aswan area. Consequently, the pollution indices, univariate and multivariate statistical methods have been applied, in order to assess the geochemical characteristics of these elements and their impact on soil environmental quality and plant, and to reach for their potential input sources. The investigation revealed that the mean and range values of all element concentrations in agricultural soil are higher than those in desert soil. Furthermore, the agricultural soil displayed various degrees of enrichment and pollution of Cd, Zn, Mo, Co, P, Ti, Pb. The geochemical pattern of integrated pollution indices gave a clear image of extreme and strong pollution in the agricultural soil stations, their poor quality with high risk to human health and considered as a tocsin for an alert. In contrast, the desert soil is the good environmental quality and safe for plant, animal and human health. Alfalfa is tolerant plant and considered as a biomarker for P and Mo in polluted agricultural soil. Four geochemical associations of analyzing elements in agricultural soil and three ones in desert soil have been generated, and their enhancements were essentially caused by various anthropogenic activities and geogenic sources. The investigation also revealed that the broad extended desert soil is fruitful and promising as cultivable lands for agricultural processes in the futures.

Phytoremediation for Oily Desert Soils

NASA Astrophysics Data System (ADS)

Radwan, Samir

This chapter deals with strategies for cleaning oily desert soils through rhizosphere technology. Bioremediation involves two major approaches; seeding with suitable microorganisms and fertilization with microbial growth enhancing materials. Raising suitable crops in oil-polluted desert soils fulfills both objectives. The rhizosphere of many legume and non-legume plants is richer in oil-utilizing micro-organisms than non-vegetated soils. Furthermore, these rhizospheres also harbour symbiotic and asymbiotic nitrogen-fixing bacteria, and are rich in simple organic compounds exuded by plant roots. Those exudates are excellent nutrients for oil-utilizing microorganisms. Since many rhizospheric bacteria have the combined activities of hydrocarbon-utilization and nitrogen fixation, phytoremediation provides a feasible and environmentally friendly biotechnology for cleaning oil-polluted soils, especially nitrogen-poor desert soils.

Diversity and Activity of Denitrifiers of Chilean Arid Soil Ecosystems

PubMed Central

Orlando, Julieta; Carú, Margarita; Pommerenke, Bianca; Braker, Gesche

2012-01-01

The Chilean sclerophyllous matorral is a Mediterranean semiarid ecosystem affected by erosion, with low soil fertility, and limited by nitrogen. However, limitation of resources is even more severe for desert soils such as from the Atacama Desert, one of the most extreme arid deserts on Earth. Topsoil organic matter, nitrogen and moisture content were significantly higher in the semiarid soil compared to the desert soil. Although the most significant loss of biologically preferred nitrogen from terrestrial ecosystems occurs via denitrification, virtually nothing is known on the activity and composition of denitrifier communities thriving in arid soils. In this study we explored denitrifier communities from two soils with profoundly distinct edaphic factors. While denitrification activity in the desert soil was below detection limit, the semiarid soil sustained denitrification activity. To elucidate the genetic potential of the soils to sustain denitrification processes we performed community analysis of denitrifiers based on nitrite reductase (nirK and nirS) genes as functional marker genes for this physiological group. Presence of nirK-type denitrifiers in both soils was demonstrated but failure to amplify nirS from the desert soil suggests very low abundance of nirS-type denitrifiers shedding light on the lack of denitrification activity. Phylogenetic analysis showed a very low diversity of nirK with only three distinct genotypes in the desert soil which conditions presumably exert a high selection pressure. While nirK diversity was also limited to only few, albeit distinct genotypes, the semiarid matorral soil showed a surprisingly broad genetic variability of the nirS gene. The Chilean matorral is a shrub land plant community which form vegetational patches stabilizing the soil and increasing its nitrogen and carbon content. These islands of fertility may sustain the development and activity of the overall microbial community and of denitrifiers in particular. PMID:22493591

Impacts of off-road vehicles on nitrogen cycles in biological soil crusts: Resistance in different U.S. deserts

USGS Publications Warehouse

Belnap, Jayne

2002-01-01

Biological soil crusts are an important component of desert ecosystems, as they influence soil stability and fertility. This study examined and compared the short-term vehicular impacts on lichen cover and nitrogenase activity (NA) of biological soil crusts. Experimental disturbance was applied to different types of soil in regions throughout the western U.S. (Great Basin, Colorado Plateau, Sonoran, Chihuahuan, and Mojave deserts). Results show that pre-disturbance cover of soil lichens is significantly correlated with the silt content of soils, and negatively correlated with sand and clay. While disturbance appeared to reduce NA at all sites, differences were statistically significant at only 12 of the 26 sites. Cool desert sites showed a greater decline than hot desert sites, which may indicate non-heterocystic cyanobacterial species are more susceptible to disturbance than non-heterocystic species. Sandy soils showed greater reduction of NA as sand content increased, while fine-textured soils showed a greater decline as sand content increased. At all sites, higher NA before the disturbance resulted in less impact to NA post-disturbance. These results may be useful in predicting the impacts of off-road vehicles in different regions and different soils.

The response of soil microbial communities to variation in annual precipitation depends on soil nutritional status in an oligotrophic desert

PubMed Central

Montiel-González, Cristina; Tapia-Torres, Yunuen; Souza, Valeria

2017-01-01

Background Soil microbial communities (SMC) play a central role in the structure and function of desert ecosystems. However, the high variability of annual precipitation could results in the alteration of SMC and related biological processes depending on soil water potential. The nature of the physiological adjustments made by SMC in order to obtain energy and nutrients remains unclear under different soil resource availabilities in desert ecosystems. In order to examine this dynamic, the present study examined the effects of variation in annual precipitation on physiological adjustments by the SMC across two vegetation-soil systems of different soil organic matter input in an oligotrophic desert ecosystem. Methods We collected soil samples in the Cuatro Ciénegas Basin (Mexico) under two vegetation covers: rosetophylous scrub (RS) and grassland (G), that differ in terms of quantity and quality of organic matter. Collections were conducted during the years 2011, 2012, 2013 and 2014, over which a noticeable variation in the annual precipitation occurred. The ecoenzymatic activity involved in the decomposition of organic matter, and the concentration of dissolved, available and microbial biomass nutrients, were determined and compared between sites and years. Results In 2011, we observed differences in bacterial taxonomic composition between the two vegetation covers. The lowest values of dissolved, available and microbial nutrients in both cover types were found in 2012. The G soil showed higher values of dissolved and available nutrients in the wet years. Significant positive correlations were detected between precipitation and the ratios Cmic:Nmic and Cmic:Pmic in the RS soil and Cmic:Pmic and Nmic:Pmic in the G soil. The slopes of the regression with Cmic and Nmic were higher in the G soil and lower in the RS soil. Moreover, the SMC under each vegetation cover were co-limited by different nutrients and responded to the sum of water stress and nutrient limitation. Discussion Soil community within both sites (RS and G) may be vulnerable to drought. However, the community of the site with lower resources (RS) is well adapted to acquire P resources by ecoenzyme upregulation during years with adequate precipitation, suggesting that this community is resilient after drought occurs. Under the Global Climate Change scenarios for desert ecosystems that predict reduced annual precipitation and an increased intensity and frequency of torrential rains and drought events, the soil microbial communities of both sites could be vulnerable to drought through C and P co-limitation and reallocation of resources to physiological acclimatization strategies in order to survive. PMID:29134149

The response of soil microbial communities to variation in annual precipitation depends on soil nutritional status in an oligotrophic desert.

PubMed

Montiel-González, Cristina; Tapia-Torres, Yunuen; Souza, Valeria; García-Oliva, Felipe

2017-01-01

Soil microbial communities (SMC) play a central role in the structure and function of desert ecosystems. However, the high variability of annual precipitation could results in the alteration of SMC and related biological processes depending on soil water potential. The nature of the physiological adjustments made by SMC in order to obtain energy and nutrients remains unclear under different soil resource availabilities in desert ecosystems. In order to examine this dynamic, the present study examined the effects of variation in annual precipitation on physiological adjustments by the SMC across two vegetation-soil systems of different soil organic matter input in an oligotrophic desert ecosystem. We collected soil samples in the Cuatro Ciénegas Basin (Mexico) under two vegetation covers: rosetophylous scrub (RS) and grassland (G), that differ in terms of quantity and quality of organic matter. Collections were conducted during the years 2011, 2012, 2013 and 2014, over which a noticeable variation in the annual precipitation occurred. The ecoenzymatic activity involved in the decomposition of organic matter, and the concentration of dissolved, available and microbial biomass nutrients, were determined and compared between sites and years. In 2011, we observed differences in bacterial taxonomic composition between the two vegetation covers. The lowest values of dissolved, available and microbial nutrients in both cover types were found in 2012. The G soil showed higher values of dissolved and available nutrients in the wet years. Significant positive correlations were detected between precipitation and the ratios Cmic:Nmic and Cmic:Pmic in the RS soil and Cmic:Pmic and Nmic:Pmic in the G soil. The slopes of the regression with Cmic and Nmic were higher in the G soil and lower in the RS soil. Moreover, the SMC under each vegetation cover were co-limited by different nutrients and responded to the sum of water stress and nutrient limitation. Soil community within both sites (RS and G) may be vulnerable to drought. However, the community of the site with lower resources (RS) is well adapted to acquire P resources by ecoenzyme upregulation during years with adequate precipitation, suggesting that this community is resilient after drought occurs. Under the Global Climate Change scenarios for desert ecosystems that predict reduced annual precipitation and an increased intensity and frequency of torrential rains and drought events, the soil microbial communities of both sites could be vulnerable to drought through C and P co-limitation and reallocation of resources to physiological acclimatization strategies in order to survive.

Seasonal and soil-type dependent emissions of nitrous oxide from irrigated desert soils amended with digested poultry manures.

PubMed

Posmanik, Roy; Nejidat, Ali; Dahan, Ofer; Gross, Amit

2017-09-01

Expansion of dryland agriculture requires intensive supplement of organic fertilizers to improve the fertility of nutrient-poor desert soils. The environmental impact of organic supplements in hot desert climates is not well understood. We report on seasonal emissions of nitrous oxide (N 2 O) from sand and loess soils, amended with limed and non-limed anaerobic digestate of poultry manure in the Israeli Negev desert. All amended soils had substantially higher N 2 O emissions, particularly during winter applications, compared to unammended soils. Winter emissions from amended loess (10-175mgN 2 Om -2 day -1 ) were markedly higher than winter emissions from amended sand (2-7mgN 2 Om -2 day -1 ). Enumeration of marker genes for nitrification and denitrification suggested that both have contributed to N 2 O emissions according to prevailing environmental conditions. Lime treatment of digested manure inhibited N 2 O emissions regardless of season or soil type, thus reducing the environmental impact of amending desert soils with manure digestate. Copyright © 2017 Elsevier B.V. All rights reserved.

Effects of added Zn, Ni and Cd on desert shrubs grown in desert soil

DOE Office of Scientific and Technical Information (OSTI.GOV)

Patel, P.M.; Wallace, A.; Romney, E.M.

1980-01-01

Desert shrubs - Ambrosia dumosa, Lycium andersonii, Larrea tridenata, and Ephedra nevadensis wre grown in a glasshouse in desert (calcarous) soil with different levels of added Zn, Ni, and Cd. The objective was to study effects of the metals on growth and yield and uptake and translocation of metals in desert plant species which are common in the Mojave Desert (areas of Nevada and southeast California). Zinc and Cd considerably decreased yields of all four species. Yields of E. nevadensis were increased by Ni at 250 and 500 mg/kg applied to desert soil. Ephedra nevadensis was more tolerant of Nimore » than were the other three desert shrubs. Some interactions were observed among various elements: manganese concentration was increased in shrubs by Zn. Particularly, application of Ni reduced the concentrations of Zn and Mn over the control.« less

Biogeochemical Heterogeneity in Mars Analog Soils from the Atacama Desert

NASA Astrophysics Data System (ADS)

Claire, M.; Shirey, B.; Brown, M.; Anderson, D.; Van Mourik, M.

2014-12-01

Water is ubiquitous on Earth and plays a fundamental role in all aspects of biogeochemical cycling. Our existence on an aqua planet hampers our ability to interpret a planet like Mars where it may not have rained for a billion years. Soils from the hyperarid core of Chile's Atacama Desert may represent the closest geochemical analog to Martian soils, as this region has the lowest precipitation on Earth. The extreme lack of rainfall (a few mm per decade) limits both weathering and biological activity to the point where soils are effectively sterile. Oxidized end products of atmospheric chemistry such as nitrate and perchlorate build up to values approaching those measured on Mars by NASA's Phoenix Lander. In June 2012, we collected soil samples from 8 locations along an aridity gradient from the hyperarid core of the Atacama (rainfall < 1 mm/yr) towards the arid (5-100 mm/yr) surrounding areas where microbial community activity is sufficient to support the hardiest of desert plant species. Field observations indicate that microbial activity and geochemical heterogeneity are anti-correlated. We will present our quantitative results coupling geochemical heterogeneity (salt concentrations, org C/N, trace metals) and microbial community activity (TRFLP, nitrogen cycling) along this transect, and argue that geochemical heterogeneity (which could be measured by a rover or lander on Mars) may be a proxy for lifeless soils.

Physiological Conjunction of Allelochemicals and Desert Plants

PubMed Central

Dudai, Nativ; Rachmilevitch, Shimon

2013-01-01

Plants exchange signals with other physical and biological entities in their habitat, a form of communication termed allelopathy. The underlying principles of allelopathy and secondary-metabolite production are still poorly understood, especially in desert plants. The coordination and role of secondary metabolites were examined as a cause of allelopathy in plants thriving under arid and semiarid soil conditions. Desert plant species, Origanum dayi, Artemisia sieberi and Artemisia judaica from two different sources (cultivar cuttings and wild seeds) were studied in their natural habitats. Growth rate, relative water content, osmotic potential, photochemical efficiency, volatile composition and vital factors of allelopathy were analyzed at regular intervals along four seasons with winter showing optimum soil water content and summer showing water deficit conditions. A comprehensive analysis of the volatile composition of the leaves, ambient air and soil in the biological niche of the plants under study was carried out to determine the effects of soil water conditions and sample plants on the surrounding flora. Significant morpho-physiological changes were observed across the seasons and along different soil water content. Metabolic analysis showed that water deficit was the key for driving selective metabolomic shifts. A. judaica showed the least metabolic shifts, while A. sieberi showed the highest shifts. All the species exhibited high allelopathic effects; A. judaica displayed relatively higher growth-inhibition effects, while O. dayi showed comparatively higher germination-inhibition effects in germination assays. The current study may help in understanding plant behavior, mechanisms underlying secondary-metabolite production in water deficit conditions and metabolite-physiological interrelationship with allelopathy in desert plants, and can help cull economic benefits from the produced volatiles. PMID:24339945

Thermal and Evolved Gas Analysis (TEGA) of hyperarid soils doped with microorganisms from the Atacama Desert in southern Peru (Pampas de la Joya): Implications for the Phoenix Mission

NASA Astrophysics Data System (ADS)

Valdivia-Silva, Julio E.; Navarro-Gonzalez, Rafael; McKay, Chris

TEGA is one of several instruments on board of the Phoenix Lander that will perform differential scanning calorimetry and evolved gas analysis of soil samples and ice, collected from the surface and subsurface at a northern landing site on Mars. TEGA is a combination of a high-temperature furnace and a mass spectrometer that will be use to analyze samples delivered to instrument via a robotic arm. The samples will be heated at a programmed ramp rate up to 1000° C and the power required for heating will be carefully and continuously monitored (scanning calorimetry). The evolved gases generated during the process will be analyzed with the evolved-gas analyzer (a magnetic sector mass spectrometer) in order to determine the composition of gases released as a function of temperature. Our laboratory has developed a sample characterization method using a pyrolizer integrated to a quadrupole mass spectrometer to support the interpretations of TEGA data. Here we examine the thermal and evolved gas properties of six types of hyperarid soils from the Pampas de La Joya southern Peru, a possible analog to Mars, which has been previously enriched with microorganisms (Salmonella thypimurium, Micrococcus luteus, and Candida albicans) to investigate the effect of soil matrix over TEGA response. Between 20 to 40 mg of soil pre-treated to 500° C for 24 hours to remove traces of organics, was mixed with or without 5mg biomass lyophilized (dry weight). Additionally 20 mg of each one microorganism were analyzed. The samples were placed in the pyrolizer that reached 1200° C at 1 hour. The volatiles released were transferred to the MS using helium as a carrier gas. The quadrupole MS was ran in scan mode from 40-350m/z. As expected, there were significant differences in the evolved gas behaviors for microorganism samples with or without a soil matrix under similar heating conditions. In addition, samples belonging to the most arid environments had significant differences compared with less arid soils. Organic C in the form of CO2 (ion 44 m/z) for microorganisms evolved between 326±19.5° C showing characteristic patterns for each one. Others ions such as 41, 78 and 91 m/z were found too. Interestingly, the release of CO2 increased and ions previously found disappeared, demonstrating a high-oxidant activity in the soil matrix when it is subjected to temperature. Samples of soil pre-treated show CO2 evolved up to 650° C suggesting thermal decomposition of carbonates. Finally in hyperarid soils, ion 44 began its release to 330±30° C while the less arid soils to 245±45° C. These results indicate that some organics (mixed with soils) are oxidized to CO2, and that carbonates present in hyperarid soils also decompose into CO2. The nature of oxidant(s) present in the soils from Pampas de La Joya is still unknown. Key words: Thermal analysis, TEGA, Atacama desert, La Joya desert, hyperarid soils.

A New Method for Estimating Bacterial Abundances in Natural Samples using Sublimation

NASA Technical Reports Server (NTRS)

Glavin, Daniel P.; Cleaves, H. James; Schubert, Michael; Aubrey, Andrew; Bada, Jeffrey L.

2004-01-01

We have developed a new method based on the sublimation of adenine from Escherichia coli to estimate bacterial cell counts in natural samples. To demonstrate this technique, several types of natural samples including beach sand, seawater, deep-sea sediment, and two soil samples from the Atacama Desert were heated to a temperature of 500 C for several seconds under reduced pressure. The sublimate was collected on a cold finger and the amount of adenine released from the samples then determined by high performance liquid chromatography (HPLC) with UV absorbance detection. Based on the total amount of adenine recovered from DNA and RNA in these samples, we estimated bacterial cell counts ranging from approx. l0(exp 5) to l0(exp 9) E. coli cell equivalents per gram. For most of these samples, the sublimation based cell counts were in agreement with total bacterial counts obtained by traditional DAPI staining. The simplicity and robustness of the sublimation technique compared to the DAPI staining method makes this approach particularly attractive for use by spacecraft instrumentation. NASA is currently planning to send a lander to Mars in 2009 in order to assess whether or not organic compounds, especially those that might be associated with life, are present in Martian surface samples. Based on our analyses of the Atacama Desert soil samples, several million bacterial cells per gam of Martian soil should be detectable using this sublimation technique.

Microwave penetration and attenuation in desert soil - A field experiment with the Shuttle Imaging Radar

NASA Technical Reports Server (NTRS)

Farr, T. G.; Elachi, C.; Hartl, P.; Chowdhury, K.

1986-01-01

Receivers buried in the Nevada desert were used with the Shuttle Imaging Radar to measure microwave attenuation as a function of soil moisture in situ. Results agree closely with laboratory measurements of attenuation and suggest that penetration of tens of centimeters in desert soils is common for L-band (1.2-GHz) radar.

Faunalpedturbation effects on soil microarthropods in the Negev Desert

USDA-ARS?s Scientific Manuscript database

Soil microarthropod communities in seed-harvester ant-nest (Messor spp.) soils and pits excavated by porcupines (Hystrix indica) were examined on a hill-slope catena in the Negev Desert to test the hypothesis that animal-produced soil disturbances increase abundance and diversity of soil biota. Ther...

Soil N retention and nitrate leaching in three types of dunes in the Mu Us desert of China.

PubMed

Jin, Zhao; Zhu, Yajuan; Li, Xiangru; Dong, Yunshe; An, Zhisheng

2015-09-15

A large reservoir of soil nitrate in desert subsoil zones has been demonstrated in previous studies; however, information on the subsoil nitrate reservoir and its distribution characteristics in the deserts of China is still limited. This study investigated the distribution patterns of soil total nitrogen (N), nitrate, ammonium, and stable isotopic ratios of (15)N (δ(15)N) in shallow (1 m) and subsoil (5 m) profiles in three types of dunes in the Mu Us desert of China. We found that soil N retention of the fixed and semi-fixed dunes followed a progressive nutrient depletion pattern in shallow soil profiles, whereas the subsoil nitrate of the fixed, semi-fixed and mobile dunes maintained a conservative accumulation pattern. The results indicate that the subsoil of the Mu Us desert may act as a reservoir of available nitrate. Furthermore, a soil δ(15)N analysis indicate that the nitrate content of the fixed dune is likely derived from soil nitrification, whereas the nitrate content in the mobile dune is derived from atmospheric nitrate deposition. Within the context of looming climate change and intensifying human activities, the subsoil nitrate content in the deserts of northern China could become mobilized and increase environmental risks to groundwater.

Soil Susceptibility to Macropore Flow Across a Desert-Oasis Ecotone of the Hexi Corridor, Northwest China

NASA Astrophysics Data System (ADS)

Zhang, Yongyong; Zhao, Wenzhi; He, Jianhua; Fu, Li

2018-02-01

Macropore flow not only provides a fast pathway for water and solute transport and increases the risks of water and nutrient loss but also enhances soil aeration and groundwater recharge. However, macropore flow characteristics in irrigated oasis soils subject to continuous crop cultivation are poorly understood. This study was to investigate the effect of continuous cultivation on soil properties and macropore flow and to quantify the changes in macropore flow characteristics in an old oasis field (>50 years of cultivation, OOF), young oasis field (20 years, YOF), and adjacent uncultivated sandy area (0 year, USL) in Northwest China. Triplicate soil samples were collected from each site to investigate soil properties. Dye tracer experiments with also three replicates were conducted at each site. The degree of macropore flow (i.e., parameters of macropore flow) was highest at the OOF, intermediate at the YOF, and minimal at the USL. The macropore flow fraction (i.e., fraction of total infiltration flows through macropore flow pathways) at the OOF was 3.4 times greater than at the USL. The heterogeneous infiltration pattern at the OOF was dominated by macropore flow, while funnel flow was predominant at the USL. Long-term irrigation with silt-laden river water has increased silt + clay contents of the oasis soils. Irrigation and high-input crop cultivation also increased organic matter. These changes in soil properties contributed to the interaggregate voids formation. The conversion of native desert soils to irrigated croplands increases the degree of macropore flow, which might enhance groundwater recharge in the desert-oasis ecotone.

The role of fire on soil mounds and surface roughness in the Mojave Desert

USGS Publications Warehouse

Soulard, Christopher E.; Esque, Todd C.; Bedford, David R.; Bond, Sandra

2013-01-01

A fundamental question in arid land management centers on understanding the long-term effects of fire on desert ecosystems. To assess the effects of fire on surface topography, soil roughness, and vegetation, we used terrestrial (ground-based) LiDAR to quantify the differences between burned and unburned surfaces by creating a series of high-resolution vegetation structure and bare-earth surface models for six sample plots in the Grand Canyon-Parashant National Monument, Arizona. We find that 11 years following prescribed burns, mound volumes, plant heights, and soil-surface roughness were significantly lower on burned relative to unburned plots. Results also suggest a linkage between vegetation and soil mounds, either through accretion or erosion mechanisms such as wind and/or water erosion. The biogeomorphic implications of fire-induced changes are significant. Reduced plant cover and altered soil surfaces from fire likely influence seed residence times, inhibit seed germination and plant establishment, and affect other ecohydrological processes.

Salts in the dry valleys of Antartica

NASA Technical Reports Server (NTRS)

Gibson, E. K., Jr.; Presley, B. J.; Hatfield, J.

1984-01-01

The Dry Valleys of Antarctica are examples of polar deserts which are rare geological features on the Earth. Such deserts typically have high salinities associated with their closed-basin waters and on many surficial materials throughout them. In order to examine the possible sources for the salts observed in association with the soils in the Dry Valleys. The chloride and bromide concentrations of the water leachates from 58 soils and core samples were measured. The Cl/Br ratio for seawater is 289 and ratios measured for most of the 58 soils studied (greater than 85% of the soils studied) was larger than the seawater ratio (ratios typically were greater than 1000 and ranged up to 50,000). The enrichment in Cl relative to Br is strong evidence that the alts present within the soils were derived from seawater during ordinary evaporation processes, and not from the deposition of Cl and Br from aerosols or from rock weathering as has often been suggested.

Leaf nitrogen and phosphorus of temperate desert plants in response to climate and soil nutrient availability

PubMed Central

He, Mingzhu; Dijkstra, Feike A.; Zhang, Ke; Li, Xinrong; Tan, Huijuan; Gao, Yanhong; Li, Gang

2014-01-01

In desert ecosystems, plant growth and nutrient uptake are restricted by availability of soil nitrogen (N) and phosphorus (P). The effects of both climate and soil nutrient conditions on N and P concentrations among desert plant life forms (annual, perennial and shrub) remain unclear. We assessed leaf N and P levels of 54 desert plants and measured the corresponding soil N and P in shallow (0–10 cm), middle (10–40 cm) and deep soil layers (40–100 cm), at 52 sites in a temperate desert of northwest China. Leaf P and N:P ratios varied markedly among life forms. Leaf P was higher in annuals and perennials than in shrubs. Leaf N and P showed a negative relationship with mean annual temperature (MAT) and no relationship with mean annual precipitation (MAP), but a positive relationship with soil P. Leaf P of shrubs was positively related to soil P in the deep soil. Our study indicated that leaf N and P across the three life forms were influenced by soil P. Deep-rooted plants may enhance the availability of P in the surface soil facilitating growth of shallow-rooted life forms in this N and P limited system, but further research is warranted on this aspect. PMID:25373739

Leaf nitrogen and phosphorus of temperate desert plants in response to climate and soil nutrient availability

NASA Astrophysics Data System (ADS)

He, Mingzhu; Dijkstra, Feike A.; Zhang, Ke; Li, Xinrong; Tan, Huijuan; Gao, Yanhong; Li, Gang

2014-11-01

In desert ecosystems, plant growth and nutrient uptake are restricted by availability of soil nitrogen (N) and phosphorus (P). The effects of both climate and soil nutrient conditions on N and P concentrations among desert plant life forms (annual, perennial and shrub) remain unclear. We assessed leaf N and P levels of 54 desert plants and measured the corresponding soil N and P in shallow (0-10 cm), middle (10-40 cm) and deep soil layers (40-100 cm), at 52 sites in a temperate desert of northwest China. Leaf P and N:P ratios varied markedly among life forms. Leaf P was higher in annuals and perennials than in shrubs. Leaf N and P showed a negative relationship with mean annual temperature (MAT) and no relationship with mean annual precipitation (MAP), but a positive relationship with soil P. Leaf P of shrubs was positively related to soil P in the deep soil. Our study indicated that leaf N and P across the three life forms were influenced by soil P. Deep-rooted plants may enhance the availability of P in the surface soil facilitating growth of shallow-rooted life forms in this N and P limited system, but further research is warranted on this aspect.

Finding Paleoclimates Using Pedogenic Carbonates

NASA Astrophysics Data System (ADS)

Garapaty, C.; Bella Pratt, K.; Blisniuk, K.

2016-12-01

Carbonate rinds naturally form on the undersides of clasts in desert soil. These carbonate rinds can be used to determine past climates in these environments because they contain certain radioactive isotopes and stable isotopes. Radioactive isotopes can provide the age of soil formation because carbonate rinds only form after the soil. When the carbonates are forming on the rock, in desert soil, they trap miniscule amounts of uranium which will radioactively decay into thorium. Therefore, the uranium to thorium ratio found when the carbonates are analyzed can accurately give you the date of the sample. On the other hand stable isotopes help determine the average temperature at the time the carbonate was formed. The oxygen in the CO3- (carbonate) are usually 16O and 18O. The ratio of 16O to 18O can give you the temperature of the environment when the carbonates formed. This ratio depends on temperature because water with 16O evaporates first since it is lighter and 18O precipitates more easily because it is heavier. Evaporation, precipitation, and temperature change, easily alters the concentration of the ratio of 16O to 18O so it is easy to calculate the temperature, in that area and at that time, from it. The samples I worked on are from the Sonoran Desert in Southern California. I used a microscope, tweezers and a small pick to remove the carbonate from the clast and remove the biotite and other contamination from the carbonate. Later, we wash the samples by hand and by using an ultrasonic machine to make them even cleaner by washing away any loose material. We had to remove the biotite and wash away the loose material because the carbonates need to be clean in order for us to analyze it accurately.

[Fractal features of soil particle size in the process of desertification in desert grassland of Ningxia, China].

PubMed

Yan, Xin; An, Hui

2017-10-01

The variation of soil properties, the fractal dimension of soil particle size, and the relationships between fractal dimension of soil particle size and soil properties in the process of desertification in desert grassland of Ningxia were discussed. The results showed that the fractal dimension (D) at different desertification stages in desert grassland varied greatly, the value of D was between 1.69 and 2.62. Except for the 10-20 cm soil layer, the value of D gradually declined with increa sing desertification of desert grassland at 0-30 cm soil layer. In the process of desertification in de-sert grassland, the grassland had the highest values of D , the volume percentage of clay and silt, and the lowest values of the volume percentage of very fine sand and fine sand. However, the mobile dunes had the lowest value of D , the volume percentage of clay and silt, and the highest value of the volume percentage of very fine sand and fine sand. There was a significant positive correlation between the soil fractal dimension value and the volume percentage of soil particles <50 μm, and a significant negative correlation between the soil fractal dimension value and the volume percentage of soil particles >50 μm. The grain size of 50 μm was the critical value for deciding the relationship between the soil particle fractal dimension and the volume percentage. Soil organic matter (SOM) and total nitrogen (TN) decreased gradually with increasing desertification of desert grassland, but soil bulk density increased gradually. Qualitative change from fixed dunes to semi fixed dunes with the rapid decrease of the volume percentage of clay and silt, SOM, TN and the rapid increase of volume percentage of very fine sand and fine sand, soil bulk density. Fractal dimension was significantly correlated to SOM, TN and soil bulk density. Fractal dimension 2.58 was a critical value of fixed dunes and semi fixed dunes. So, the fractal dimension of 2.58 could be taken as the desertification indicator of desert grassland.

Water regime history drives responses of soil Namib Desert microbial communities to wetting events

NASA Astrophysics Data System (ADS)

Frossard, Aline; Ramond, Jean-Baptiste; Seely, Mary; Cowan, Don A.

2015-07-01

Despite the dominance of microorganisms in arid soils, the structures and functional dynamics of microbial communities in hot deserts remain largely unresolved. The effects of wetting event frequency and intensity on Namib Desert microbial communities from two soils with different water-regime histories were tested over 36 days. A total of 168 soil microcosms received wetting events mimicking fog, light rain and heavy rainfall, with a parallel “dry condition” control. T-RFLP data showed that the different wetting events affected desert microbial community structures, but these effects were attenuated by the effects related to the long-term adaptation of both fungal and bacterial communities to soil origins (i.e. soil water regime histories). The intensity of the water pulses (i.e. the amount of water added) rather than the frequency of wetting events had greatest effect in shaping bacterial and fungal community structures. In contrast to microbial diversity, microbial activities (enzyme activities) showed very little response to the wetting events and were mainly driven by soil origin. This experiment clearly demonstrates the complexity of microbial community responses to wetting events in hyperarid hot desert soil ecosystems and underlines the dynamism of their indigenous microbial communities.

Water regime history drives responses of soil Namib Desert microbial communities to wetting events.

PubMed

Frossard, Aline; Ramond, Jean-Baptiste; Seely, Mary; Cowan, Don A

2015-07-21

Despite the dominance of microorganisms in arid soils, the structures and functional dynamics of microbial communities in hot deserts remain largely unresolved. The effects of wetting event frequency and intensity on Namib Desert microbial communities from two soils with different water-regime histories were tested over 36 days. A total of 168 soil microcosms received wetting events mimicking fog, light rain and heavy rainfall, with a parallel "dry condition" control. T-RFLP data showed that the different wetting events affected desert microbial community structures, but these effects were attenuated by the effects related to the long-term adaptation of both fungal and bacterial communities to soil origins (i.e. soil water regime histories). The intensity of the water pulses (i.e. the amount of water added) rather than the frequency of wetting events had greatest effect in shaping bacterial and fungal community structures. In contrast to microbial diversity, microbial activities (enzyme activities) showed very little response to the wetting events and were mainly driven by soil origin. This experiment clearly demonstrates the complexity of microbial community responses to wetting events in hyperarid hot desert soil ecosystems and underlines the dynamism of their indigenous microbial communities.

Microorganisms, Organic Carbon, and Their Relationship with Oxidant Activity in Hyper-Arid Mars-Like Soils: Implications for Soil Habitability

NASA Technical Reports Server (NTRS)

Valdivia-Silva, Julio E.; Karouia, Fathi; Navarro-Gonzalez, Rafael; McKay, Christopher

2016-01-01

Soil samples from the hyper-arid region in the Atacama 23 Desert in Southern Peru (La Joya Desert) were analyzed for total and labile organic carbon (TOC & LOC), phospholipid fatty acids analysis (PLFA), quantitative real time polymerase chain reaction (qRT-PCR), 4',6- diamidino-2-phenylindole (DAPI)-fluorescent microscopy, culturable microorganisms, and oxidant activity, in order to understand the relationship between the presence of organic matter and microorganisms in these types of soils. TOC content levels were similar to the labile pool of carbon suggesting the absence of recalcitrant carbon in these soils. The range of LOC was from 2 to 60 micro-g/g of soil. PLFA analysis indicated a maximum of 2.3 x 10(exp 5) cell equivalents/g. Culturing of soil extracts yielded 1.1 x 10(exp 2)-3.7 x 10(exp 3) CFU/g. qRT-PCR showed between 1.0 x 10(exp 2) and 8 x 10(exp 3) cells/g; and DAPI fluorescent staining indicated bacteria counts up to 5 x 104 cells/g. Arid and semiarid samples (controls) showed values between 10(exp 7) and 10(exp 11) cells/g with all of the methods used. Importantly, the concentration of microorganisms in hyper-arid soils did not show any correlation with the organic carbon content; however, there was a significant dependence on the oxidant activity present in these soil samples evaluated as the capacity to decompose sodium formate in 10 hours. We suggest that the analysis of oxidant activity could be a useful indicator of the microbial habitability in hyper-arid soils, obviating the need to measure water activity over time. This approach could be useful in astrobiological studies on other worlds.

Effects of Simulated Nitrogen Deposition on Soil Respiration in a Populus euphratica Community in the Ebinur Lake Area, a Desert Ecosystem of Northwestern China.

PubMed

He, Xuemin; Lv, Guanghui; Qin, Lu; Chang, Shunli; Yang, Min; Yang, Jianjun; Yang, Xiaodong

2015-01-01

One of the primary limiting factors for biological activities in desert ecosystems is nitrogen (N). This study therefore examined the effects of N and investigated the responses of an arid ecosystem to global change. We selected the typical desert plant Populus euphratica in a desert ecosystem in the Ebinur Lake area to evaluate the effects of N deposition on desert soil respiration. Three levels of N deposition (0, 37.5 and 112.5 kg·N·ha-1·yr-1) were randomly artificially provided to simulate natural N deposition. Changes in the soil respiration rates were measured from July to September in both 2010 and 2013, after N deposition in April 2010. The different levels of N deposition affected the total soil N, soil organic matter, soil C/N ratio, microorganism number, and microbial community structure and function. However, variable effects were observed over time in relation to changes in the magnitude of N deposition. Simulated high N deposition significantly reduced the soil respiration rate by approximately 23.6±2.5% (P<0.05), whereas low N deposition significantly increased the soil respiration rate by approximately 66.7±2.7% (P<0.05). These differences were clearer in the final growth stage (September). The different levels of N deposition had little effect on soil moisture, whereas N deposition significantly increased the soil temperature in the 0-5 cm layer (P<0.05). These results suggest that in the desert ecosystem of the Ebinur Lake area, N deposition indirectly changes the soil respiration rate by altering soil properties.

Effects of Simulated Nitrogen Deposition on Soil Respiration in a Populus euphratica Community in the Ebinur Lake Area, a Desert Ecosystem of Northwestern China

PubMed Central

He, Xuemin; Lv, Guanghui; Qin, Lu; Chang, Shunli; Yang, Min; Yang, Jianjun; Yang, Xiaodong

2015-01-01

One of the primary limiting factors for biological activities in desert ecosystems is nitrogen (N). This study therefore examined the effects of N and investigated the responses of an arid ecosystem to global change. We selected the typical desert plant Populus euphratica in a desert ecosystem in the Ebinur Lake area to evaluate the effects of N deposition on desert soil respiration. Three levels of N deposition (0, 37.5 and 112.5 kg·N·ha-1·yr-1) were randomly artificially provided to simulate natural N deposition. Changes in the soil respiration rates were measured from July to September in both 2010 and 2013, after N deposition in April 2010. The different levels of N deposition affected the total soil N, soil organic matter, soil C/N ratio, microorganism number, and microbial community structure and function. However, variable effects were observed over time in relation to changes in the magnitude of N deposition. Simulated high N deposition significantly reduced the soil respiration rate by approximately 23.6±2.5% (P<0.05), whereas low N deposition significantly increased the soil respiration rate by approximately 66.7±2.7% (P<0.05). These differences were clearer in the final growth stage (September). The different levels of N deposition had little effect on soil moisture, whereas N deposition significantly increased the soil temperature in the 0–5 cm layer (P<0.05). These results suggest that in the desert ecosystem of the Ebinur Lake area, N deposition indirectly changes the soil respiration rate by altering soil properties. PMID:26379186

Biological soil crusts as an integral component of desert environments

USGS Publications Warehouse

Belnap, Jayne; Weber, Bettina

2013-01-01

The biology and ecology of biological soil crusts, a soil surface community of mosses, lichens, cyanobacteria, green algae, fungi, and bacteria, have only recently been a topic of research. Most efforts began in the western U.S. (Cameron, Harper, Rushforth, and St. Clair), Australia (Rogers), and Israel (Friedmann, Evenari, and Lange) in the late 1960s and 1970s (e.g., Friedmann et al. 1967; Evenari 1985reviewed in Harper and Marble 1988). However, these groups worked independently of each other and, in fact, were often not aware of each other’s work. In addition, biological soil crust communities were seen as more a novelty than a critical component of dryland ecosystems. Since then, researchers have investigated many different aspects of these communities and have shown that although small to microscopic, biological soil crusts are critical in many ecological processes of deserts. They often cover most of desert soil surfaces and substantially mediate inputs and outputs from desert soils (Belnap et al. 2003). They can be a large source of biodiversity for deserts, as they can contain more species than the surrounding vascular plant community (Rosentreter 1986). These communities are important in reducing soil erosion and increasing soil fertility through the capture of dust and the fixation of atmospheric nitrogen and carbon into forms available to other life forms (Elbert et al. 2012). Because of their many effects on soil characteristics, such as external and internal morphological characteristics, aggregate stability, soil moisture, and permeability, they also affect seed germination and establishment and local hydrological cycles. Covering up to 70% of the surface area in many arid and semi-arid regions around the world (Belnap and Lange 2003), biological soil crusts are a key component within desert environments.

Ice nucleation activity of agricultural soil dust aerosols from Mongolia, Argentina, and Germany

NASA Astrophysics Data System (ADS)

Steinke, I.; Funk, R.; Busse, J.; Iturri, A.; Kirchen, S.; Leue, M.; Möhler, O.; Schwartz, T.; Schnaiter, M.; Sierau, B.; Toprak, E.; Ullrich, R.; Ulrich, A.; Hoose, C.; Leisner, T.

2016-11-01

Soil dust particles emitted from agricultural areas contain considerable mass fractions of organic material. Also, soil dust particles may act as carriers for potentially ice-active biological particles. In this work, we present ice nucleation experiments conducted in the Aerosol Interaction and Dynamics in the Atmosphere (AIDA) cloud chamber. We investigated the ice nucleation efficiency of four types of soil dust from different regions of the world. The results are expressed as ice nucleation active surface site (INAS) densities and presented for the immersion freezing and the deposition nucleation mode. For immersion freezing occurring at 254 K, samples from Argentina, China, and Germany show ice nucleation efficiencies which are by a factor of 10 higher than desert dusts. On average, the difference in ice nucleation efficiencies between agricultural and desert dusts becomes significantly smaller at temperatures below 247 K. In the deposition mode the soil dusts showed higher ice nucleation activity than Arizona Test Dust over a temperature range between 232 and 248 K and humidities RHice up to 125%. INAS densities varied between 109 and 1011 m-2 for these thermodynamic conditions. For one soil dust sample (Argentinian Soil), the effect of treatments with heat was investigated. Heat treatments (383 K) did not affect the ice nucleation efficiency observed at 249 K. This finding presumably excludes proteinaceous ice-nucleating entities as the only source of the increased ice nucleation efficiency.

Organic Components and Elemental Carbon in Soils and Ambient Particles near Phoenix, AZ

NASA Astrophysics Data System (ADS)

Fraser, M. P.; Jia, Y.; Clements, A.

2008-12-01

In the desert southwest, fugitive dust emissions contribute significantly to ambient aerosol concentrations. Wind erosion from the arid land is a primary contributor to ambient particulate matter (PM) concentrations but, in regions including Central Arizona, desert lands have been converted for agriculture use and thus agriculture processes constitute another contributor. As the metropolitan Phoenix region expands into these agricultural lands, urban sources and construction also contributes to the ambient PM load. In an effort to identify and access relative contribution of these and other major PM sources in the region, a series of ambient PM samples and soil samples were collected near Higley, AZ, a suburb of Phoenix which has seen rapid urbanization onto agricultural lands between January and May 2008. The soil samples collected were resuspended and samples of resuspended dust were collected to represent particles smaller than 2.5 microns and 10 microns in aerodynamic diameter (PM2.5 and PM10 respectively). The size segregated soil and ambient PM samples were analyzed for bulk mass, elemental and organic carbon content, and a number of specific compounds including ions, metals, alkanes, organic acids, polycyclic aromatic hydrocarbons, and saccharides. The saccharide contribution to soil organic carbon has been studied to elucidate key factors in the soil carbon balance and markers have been developed for tracing fungal metabolites, plant growth and budding and organic matter decay. Using organic markers, the contribution of various sources to PM10 and PM2.5 levels have been determined by positive matrix factorization (PMF) of the ambient aerosol marker concentrations quantified from PM samples. Subsequently, samples of local soil from native and agricultural fields and local roadways wers size- segregated and analyzed in an effort to create a source profile for the dust in the area. A chemical mass balance model has been used to compare with the PMF results where sampled and resuspended agricultural soil, native soil and road dusts are used to characterize direct emissions of these sources to ambient fine and coarse particulate matter.

Disturbance to desert soil ecosystems contributes to dust-mediated impacts at regional scales

USGS Publications Warehouse

Pointing, Stephen B.; Belnap, Jayne

2014-01-01

This review considers the regional scale of impacts arising from disturbance to desert soil ecosystems. Deserts occupy over one-third of the Earth’s terrestrial surface, and biological soil covers are critical to stabilization of desert soils. Disturbance to these can contribute to massive destabilization and mobilization of dust. This results in dust storms that are transported across inter-continental distances where they have profound negative impacts. Dust deposition at high altitudes causes radiative forcing of snowpack that leads directly to altered hydrological regimes and changes to freshwater biogeochemistry. In marine environments dust deposition impacts phytoplankton diazotrophy, and causes coral reef senescence. Increasingly dust is also recognized as a threat to human health.

Characterization of natural habitats and diversity of Libyan desert truffles.

PubMed

Bouzadi, Mozidi; Grebenc, Tine; Turunen, Ossi; Kraigher, Hojka; Taib, Hassan; Alafai, Abdulhafied; Sbissi, Imed; Assad, Mamdouh El Haj; Bedade, Dattatray; Shamekh, Salem

2017-10-01

Desert truffles have traditionally been used as food in Libya. Desert truffle grows and gives fruit sporadically when adequate and properly distributed rainfall occurs with existence of suitable soil and mycorrhizal host plant. The present study aimed to identify and characterize two kinds of wild desert truffles from ecological and nutritional points that were collected from the studied area. The truffle samples were identified as Terfezia (known as red or black truffle) and Tirmania (known as white truffle). The nutritional values (protein, lipid and carbohydrate) of both Libyan wild truffle ( Terfezia and Tirmania) were determined on a dry weight basis and result showed that Tirmania and Terfezia contained 16.3 and 18.5% protein, 6.2 and 5.9% lipid, 67.2 and 65% carbohydrate, respectively, in ascocarp biomass. The soil pH of the upper and lower regions of the Hamada Al-Hamra ranged between 8.2 and 8.5 giving suitable conditions for fructification. The plants, Helianthemum kahiricum and Helianthemum lippii were the dominant plants in Hamada Al-Hamra region found to form a mycorrhiza with desert truffles. The phylogenetic analysis of the genomic rDNA ITS region showed that, out of five collections three represented Tirmania pinoyi (Maire) Malencon, one Tirmania nivea (Desf.) Trappe, and one Terfezia boudieri Chatin.

Transpiration and CO/sub 2/ fixation of selected desert shrubs as related to soil-water potential

DOE Office of Scientific and Technical Information (OSTI.GOV)

Clark, S.B.; Letey, J. Jr.; Lunt, O.R.

1980-01-01

In desert plants, transpiration rates decreased before photosynthetic rates when plants were entering a period of water stress. This may have adaptive consequences. A difference of -5 bars in the soil-moisture potential had considerable importance in reducing the rate of transpiration. In Helianthus annuus L. (sunflower) the photosynthetic rate decreased before the transpiration rate in contrast to Great Basin-Mojave Desert plants, and the changes occurred with a -1 bar difference in soil-moisture potential. Morphological changes in three desert plant species (Artemisia tridentata Nutt., Ambrosia dumosa (Gray) Payne, Larrea tridentata (Ses. Moc. ex DC) Cov.) as the soil-moisture potential decreased aremore » given. With a mesic species, H. annuus, 20% reduction in photosynthesis and transpiration was reached at higher soil-moisture potentials than with the desert plants. Loss of net photosynthesis occurred in A. dumosa (a summer deciduous shrub) as PSI soil reached -48 bars in the field, whereas L. tridentata (an evergreen shrub) at the same time was able to maintain a water potential difference between soil and plant of -10 to -15 bars and continue net CO/sub 2/ gain well into the summer months.« less

Preservation of Lipid Biomarkers Under Prolonged and Extreme Hyperaridity in Atacama Desert Soils

NASA Technical Reports Server (NTRS)

Wilhelm, Mary Beth

2015-01-01

Molecular biomarkers are the most direct biosignatures of life on early Earth and a key target in the search for life on Mars. Lipid biomarkers are of particular interest given their ability to survive oxidative degradation and record microbial presence and activity of microorganisms that occurred billions of years ago (Eigenbrode, 2008). Environmental conditions that suspend biotic and abiotic degradative processes prior to lithification can lead to enhanced biomolecular preservation over geological time-scales. The hyperarid core of the Atacama Desert in northern Chile offers a unique environment to investigate lipid biomarker taphonomy under extreme and prolonged dryness. We investigated the accumulation and degree of preservation of lipid biomarkers in million-year-old hyperarid soils where primarily abiotic conditions influence their taphonomy. Soils were extracted and free and membrane bound lipids were analyzed across a vertical profile of 2.5 meters in the Yungay hyper-arid core of the Atacama Desert. Due to the extremely low inventory of biomass in Atacama soils, samples were collected by scientists wearing cleanroom suits to minimize anthropogenic contamination during sampling. Fatty acids were found to be well preserved in Yungay soils, and were most abundant in the clay-rich soils at approx.2 m depth (approx.750 ng of fatty acid methyl ester/g of soil). These buried clays layers were fluvially deposited approximately 2 million years ago, and have been excluded from exposure to rainwater and modern surficial processes since their emplacement (Ewing et al., 2008). Monocarboxylic fatty acid, monohydroxy fatty acid, glycerol tetraether, and n-alkane hydrocarbon content was found to change with depth. Lipid biomarker content in deeper soil layers is suggestive of soils having been formed at a time when environmental conditions were capable of supporting active microbial communities and plants. In short, total lipid extracts reveal a remarkable degree of lipid biomarker preservation even in the oldest soils analyzed (ca. 2 Myr) indicating that typical diagenetic processes of lipid destruction are arrested under extreme dryness. This result has implications for the search for molecular biomarkers on Mars, which could have experienced millions to billions of years of extreme hyperaridity.

Preservation of Lipid Biomarkers Under Prolonged and Extreme Hyperaridity in Atacama Desert Soils

NASA Astrophysics Data System (ADS)

Wilhelm, M. B.; Davila, A. F.; Eigenbrode, J. L.; Parenteau, M. N.; Jahnke, L. L.; Summons, R. E.; Liu, X.; Wray, J. J.; Stamos, B.; O'Reilly, S. S.; Williams, A. J.

2015-12-01

Molecular biomarkers are the most direct biosignatures of life on early Earth and a key target in the search for life on Mars. Lipid biomarkers are of particular interest given their ability to survive oxidative degradation and record microbial presence and activity of microorganisms that occurred billions of years ago (Eigenbrode, 2008). Environmental conditions that suspend biotic and abiotic degradative processes prior to lithification can lead to enhanced biomolecular preservation over geological time-scales. The hyperarid core of the Atacama Desert in northern Chile offers a unique environment to investigate lipid biomarker taphonomy under extreme and prolonged dryness. We investigated the accumulation and degree of preservation of lipid biomarkers in million-year-old hyperarid soils where primarily abiotic conditions influence their taphonomy. Soils were extracted and free and membrane bound lipids were analyzed across a vertical profile of 2.5 meters in the Yungay hyper-arid core of the Atacama Desert. Due to the extremely low inventory of biomass in Atacama soils, samples were collected by scientists wearing cleanroom suits to minimize anthropogenic contamination during sampling. Fatty acids were found to be well preserved in Yungay soils, and were most abundant in the clay-rich soils at ~2 m depth (~750 ng of fatty acid methyl ester/g of soil). These buried clays layers were fluvially deposited approximately 2 million years ago, and have been excluded from exposure to rainwater and modern surficial processes since their emplacement (Ewing et al., 2008). Monocarboxylic fatty acid, monohydroxy fatty acid, glycerol tetraether, and n-alkane hydrocarbon content was found to change with depth. Lipid biomarker content in deeper soil layers is suggestive of soils having been formed at a time when environmental conditions were capable of supporting active microbial communities and plants. In short, total lipid extracts reveal a remarkable degree of lipid biomarker preservation even in the oldest soils analyzed (ca. 2 Myr) indicating that typical diagenetic processes of lipid destruction are arrested under extreme dryness. This result has implications for the search for molecular biomarkers on Mars, which could have experienced millions to billions of years of extreme hyperaridity.

Changes in soil aggregate dynamics following 18 years of experimentally increased precipitation in a cold desert ecosystem

NASA Astrophysics Data System (ADS)

De Graaff, M.; vanderVeen, J.; Germino, M. J.

2011-12-01

Climate change is expected to alter the amount and timing of precipitation in semiarid ecosystems of the intermountain west, which can alter soil carbon dynamics. Specifically, an increase in precipitation in arid ecosystems promotes microbial activity, which can increase soil aggregate formation and enhance sequestration of soil organic carbon within stable aggregates. This study was conducted to assess: (1) how precipitation shifts affect soil aggregate formation and associated soil organic carbon contents in semi arid ecosystems, and (2) how plants mediate precipitation impacts on soil aggregate dynamics. Soil samples were collected from a long-term ecohydrology study located in the cold desert of the Idaho National Lab, USA. Precipitation treatments delivered during the previous 18 years consist of three regimes: (1) a control (ambient precipitation), (2) 200 mm irrigation added during the growing season, and (3) 200 mm irrigation added during the cold dormant season. Experimental plots were planted with a diverse native mix of big sagebrush (Artemisia tridentate) and associated shrubs, grasses, and forbs, but had also become invaded by crested wheatgrass (Agropyron cristatum). Soils were collected in February (2011) with a 4.8 cm diameter soil corer to a depth of 15 cm. Across all precipitation treatments we sampled both directly beneath sagebrush and crested wheatgrass and from relatively bare plant-interspaces. Subsamples (100 g) were sieved (4.75 mm) and air dried. Then, the soils were fractionated into (1) macro aggregates (> 250 μm), (2) free micro aggregates (53-250 μm) and (3) free silt and clay fractions (<53 μm), using a wet sieving protocol. Further, macro aggregates were separated into particulate organic matter (POM), micro aggregates and silt and clay fractions using a micro aggregate isolator. Soil fractions were analyzed for soil organic carbon contents after removal of soil carbonates using sulfurous acid. Our preliminary results indicate that supplemental precipitation enhanced macro aggregate formation by 20% under plants and by 70% in plant interspaces. In contrast, free silt and clay fractions decreased in response to supplemental precipitation. These preliminary findings suggest that increased precipitation in a cold desert ecosystem may significantly enhance soil structure, particularly in the interspaces separating plants where surface crusting, poor infiltration and reduced fertility otherwise prevail.

Diversity and Ecology of Viruses in Hyperarid Desert Soils

PubMed Central

Zablocki, Olivier; Adriaenssens, Evelien M.

2015-01-01

In recent years, remarkable progress has been made in the field of virus environmental ecology. In marine ecosystems, for example, viruses are now thought to play pivotal roles in the biogeochemical cycling of nutrients and to be mediators of microbial evolution through horizontal gene transfer. The diversity and ecology of viruses in soils are poorly understood, but evidence supports the view that the diversity and ecology of viruses in soils differ substantially from those in aquatic systems. Desert biomes cover ∼33% of global land masses, and yet the diversity and roles of viruses in these dominant ecosystems remain poorly understood. There is evidence that hot hyperarid desert soils are characterized by high levels of bacterial lysogens and low extracellular virus counts. In contrast, cold desert soils contain high extracellular virus titers. We suggest that the prevalence of microbial biofilms in hyperarid soils, combined with extreme thermal regimens, exerts strong selection pressures on both temperate and virulent viruses. Many desert soil virus sequences show low values of identity to virus genomes in public databases, suggesting the existence of distinct and as-yet-uncharacterized soil phylogenetic lineages (e.g., cyanophages). We strongly advocate for amplification-free metavirome analyses while encouraging the classical isolation of phages from dominant and culturable microbial isolates in order to populate sequence databases. This review provides an overview of recent advances in the study of viruses in hyperarid soils and of the factors that contribute to viral abundance and diversity in hot and cold deserts and offers technical recommendations for future studies. PMID:26590289

Abundance and distribution of selected elements in soils, stream sediments, and selected forage plants from desert tortoise habitats in the Mojave and Colorado deserts, USA

USGS Publications Warehouse

Chaffee, M.A.; Berry, K.H.

2006-01-01

A baseline and background chemical survey was conducted in southeastern California, USA, to identify potential sources of toxicants in natural and anthropogenically-altered habitats of the threatened desert tortoise (Gopherus agassizii). Soil, stream sediment, and plant samples were collected from six tortoise habitat study areas in the Mojave and Colorado deserts and analysed for up to 66 different elements. The chemical analyses provided new information on the abundances and distributions of selected elements in this region. Soil, stream-sediment, and plant analyses showed distinct variations in bulk chemistries from locality to locality. Variations were, in general, consistent with the many types of exposed rock units in the region, their highly variable bulk mineralogies, and chemical contents. Of elements in soils that might have been toxic to tortoises, only As seemed to be anomalous region-wide. Some soil and plant anomalies were clearly anthropogenic. In the Rand and Atolia mining districts, soil anomalies for As, Au, Cd, Hg, Sb, and(or) W and plant anomalies for As, Sb, and(or) W extend as far as ???15 km outward from the present area of mining; soils containing anomalous Hg were found at least 6 km away from old piles of tailings. The anomalous concentrations of As and Hg may have been the source of elevated levels of these elements found in ill tortoises from the region. In the Goldstone mining district, soil anomalies extended several km from the mining area. These areas probably represented anthropogenic surface contamination of dust redistributed by wind, vehicles, and rainfall. One of two study areas transected by a paved road (Chemehuevi Valley) showed weakly elevated levels of Pb, which extended as far as ???22 m from the pavement edge and were probably related to vehicle exhaust. No soil or plant samples from historically used military areas (Goldstone, Goffs, Chemehuevi Valley, Chuckwalla Bench) contained anomalous concentrations of the elements As, Cu, Cr, Fe, Pb, or Zn that could be ascribed to military maneuvers, vehicles, or ordnance. For future studies, the distribution and abundance of elements in the tortoise forage plants need to be evaluated for the respective roles of dust and systemic uptake. Additional chemical data from tortoise necropsies and nutritional studies are needed to determine the effects of potentially toxic elements in tortoise habitats on their health. ?? 2006 Elsevier Ltd. All rights reserved.

Recovery of compacted soils in Mojave Desert ghost towns.

USGS Publications Warehouse

Webb, R.H.; Steiger, J.W.; Wilshire, H.G.

1986-01-01

Residual compaction of soils was measured at seven sites in five Mojave Desert ghost towns. Soils in these Death Valley National Monument townsites were compacted by vehicles, animals, and human trampling, and the townsites had been completely abandoned and the buildings removed for 64 to 75 yr. Recovery times extrapolated using a linear recovery model ranged from 80 to 140 yr and averaged 100 yr. The recovery times were related to elevation, suggesting freeze-thaw loosening as an important factor in ameliorating soil compaction in the Mojave Desert. -from Authors

Dry Acid Deposition and Accumulation on the Surface of Mars and in the Atacama Desert, Chile

NASA Technical Reports Server (NTRS)

Quinn, R. C.; Zent, A. P.; Ehrenfruend, P.; Taylor, C. L.; McKay, C. P.; Garry, J. R. C.

2005-01-01

It has been discovered recently that soils from certain regions of the Chilean Atacama Desert have some characteristics that are similar to the surface materials tested by the Viking Landers. Navarro-Gonzalez et al. demonstrated that the quantity and diversity of heterotrophic bacteria increase as a function of local water availability in the Atacama, and that for some soil samples collected in the driest regions, no culturable bacteria could be isolated. Additionally, Navarro-Gonzalez et al. reported that pyrolysis-GCMS analysis of soils collected from these regions revealed extremely low levels of organic matter. Although the mechanism resulting in the low level of organics in these regions was not established by Navarro-Gonzalez, the condition of organic-depleted, near-sterile soil offers an interesting Earth analog of the martian surface material, as the Viking Gas Exchange (GEx) experiment and Labeled Release (LR) experiment were unable to demonstrate the presence of culturable bacteria, and the Viking pyrolysis- GCMS was unable to detect organic compounds.

Microbial Diversity in Soil, Sand Dune and Rock Substrates of the Thar Monsoon Desert, India.

PubMed

Rao, Subramanya; Chan, Yuki; Bugler-Lacap, Donnabella C; Bhatnagar, Ashish; Bhatnagar, Monica; Pointing, Stephen B

2016-03-01

A culture-independent diversity assessment of archaea, bacteria and fungi in the Thar Desert in India was made. Six locations in Ajmer, Jaisalmer, Jaipur and Jodhupur included semi-arid soils, arid soils, arid sand dunes, plus arid cryptoendolithic substrates. A real-time quantitative PCR approach revealed that bacteria dominated soils and cryptoendoliths, whilst fungi dominated sand dunes. The archaea formed a minor component of all communities. Comparison of rRNA-defined community structure revealed that substrate and climate rather than location were the most parsimonious predictors. Sequence-based identification of 1240 phylotypes revealed that most taxa were common desert microorganisms. Semi-arid soils were dominated by actinobacteria and alpha proteobacteria, arid soils by chloroflexi and alpha proteobacteria, sand dunes by ascomycete fungi and cryptoendoliths by cyanobacteria. Climatic variables that best explained this distribution were mean annual rainfall and maximum annual temperature. Substrate variables that contributed most to observed diversity patterns were conductivity, soluble salts, Ca(2+) and pH. This represents an important addition to the inventory of desert microbiota, novel insight into the abiotic drivers of community assembly, and the first report of biodiversity in a monsoon desert system.

Astrobiology Results from ILEWG EuroMoonMars Analogue Field Research

NASA Astrophysics Data System (ADS)

Foing, Bernard H.

We give an update on the astrobiology results from a series of field research campaigns (ILEWG EuroMoonMars) in the extreme environment of the Utah desert. These are relevant to prepare future lunar landers and polar sample return missions, interpret Moon-Mars data (eg SMART1, LRO, Mars Express, MRO, MER, MSL), study habitability and astrobiology in Moon-Mars environments, or to test human-robotic surface EVA or base operations. In the frame of ILEWG EuroMoonMars campaigns (2009 to 2013) we deployed at Mars Desert Research station near Hanksville Utah, a suite of instruments and techniques [0, 1, 2, 9-11] including sample collection, context imaging from re-mote to local and microscale, drilling, spectrometers and life sensors. We analyzed how geological and geo-chemical evolution affected local parameters (mineralogy, organics content, environment variations) and the habitability and signature of organics and biota. Results: Among the important findings are the diversity in the composition of soil samples even when collected in close proximity, the low abundances of detectable PAHs and amino acids and the presence of biota of all three domains of life with significant heterogeneity. An extraordinary variety of putative extremophiles was observed [3,4,9]. A dominant factor seems to be soil porosity and lower clay-sized particle content [6-8]. A protocol was developed for sterile sampling, contamination issues, and the diagnostics of biodiversity via PCR and DGGE analysis in soils and rocks samples [10, 11]. We compare the 2009 campaign results [0-9] to new measurements from 2010-2013 campaigns relevant to: comparison between remote sensing and in-situ measurements; the study of minerals; the detection of organics and signs of life. We acknowledge team members and supporting institutes: B.H. Foing (1, 2, 6), C. Stoker (3), P. Ehrenfreund (4, 5), I. Rammos (2), L. Rodrigues (2), A. Svendsen (2), D. Oltheten (2), I. Schlacht (2), K. Nebergall (6), M. Battler (6, 7), H. v’t Houd (8), A. Bruneau (6,9), M. Cross (6,7), V. Maivald (10), C. Orgel (6), A. Elsaesser (4), S.O.L. Direito (2,4), W.F.M. Röling (2), G.R. Davies (2); EuroGeoMars2009 Team, DOMMEX-ILEWG EuroMoonMars 2010-2013 Teams (1) ESA/ ESTEC, Postbus 299, 2200 AG Noordwik, NL; (2) Vrije Universiteit, Amsterdam, Faculty of Earth & Life Sciences, De Boelelaan 1085, 1081 HV Amsterdam, NL; (3) NASA Ames Research Centre; US; (4) Leiden Institute of Chemistry, NL; (5) Space Policy Institute, GWU, Washington D.C., USA; (6) ILEWG; (7) CPSX; (8) Cerberus Blackshore, ESIC Noordwijk, NL; (9) ENSC Bordeaux; (10) DLR, Bremen References: Foing, Stoker & Ehrenfreund (Editors, 2011) “Astrobiology field Research in Moon/Mars Analogue Environments”, Special Issue of International Journal of Astrobiology , IJA 2011, 10, vol.3. 137-305; [1] Foing B. et al. (2011) Field astrobiology research at Moon-Mars analogue site: Instruments and methods, IJA 2011, 10 (3), 141; [2] Clarke, J., Stoker, C. Concretions in exhumed & inverte channels near Hanksville Utah: implications for Mars, (IJA 2011, 10 (3), 162; [3] Thiel et al., (2011) PCR-based analysis of microbial communities during the EuroGeoMars campaign at Mars Desert Research Station, Utah. (IJA 2011, 10 (3), 177; [4] Direito et al. (2011). A wide variety of putative extremophiles and large beta-diversity at the Mars Desert Research Station (Utah). (IJA 2011, 10 (3), 191; [5] Orzechowska, G. et al (20110 analysis of Mars Analog soils using solid Phase Microextraction, Organics solvent extraction and GCMS, (IJA 2011, 10 (3), 209; [6] Kotler et al. (2011). Analysis of mineral matrices of planetary soils analogs from the Utah Desert. (IJA 2011, 10 (3), 221; [7] Martins et al. (2011). Extraction of amino acids from soils close to the Mars Desert Research Station (MDRS), Utah. (IJA 2011, 10 (3), 231; [8] Ehrenfreund et al. (2011) Astrobiology and habitability studies in preparation for future Mars missions: trends from investigating minerals, organics and biota. (IJA 2011, 10 (3), 239; [9] Stoker C. et al (2011) Mineralogical, Chemical, Organic & Microbial Properties of Subsurface Soil Cores from Mars Desert Research Station, a Phyllosilicate and Sulfate Rich Mars Analog Site, IJA 2011, 10 (3), 269; [10-11] Rodrigues L. et al (2014, in preparation)

Namib Desert edaphic bacterial, fungal and archaeal communities assemble through deterministic processes but are influenced by different abiotic parameters.

PubMed

Johnson, Riegardt M; Ramond, Jean-Baptiste; Gunnigle, Eoin; Seely, Mary; Cowan, Don A

2017-03-01

The central Namib Desert is hyperarid, where limited plant growth ensures that biogeochemical processes are largely driven by microbial populations. Recent research has shown that niche partitioning is critically involved in the assembly of Namib Desert edaphic communities. However, these studies have mainly focussed on the Domain Bacteria. Using microbial community fingerprinting, we compared the assembly of the bacterial, fungal and archaeal populations of microbial communities across nine soil niches from four Namib Desert soil habitats (riverbed, dune, gravel plain and salt pan). Permutational multivariate analysis of variance indicated that the nine soil niches presented significantly different physicochemistries (R 2  = 0.8306, P ≤ 0.0001) and that bacterial, fungal and archaeal populations were soil niche specific (R 2  ≥ 0.64, P ≤ 0.001). However, the abiotic drivers of community structure were Domain-specific (P < 0.05), with P, clay and sand fraction, and NH 4 influencing bacterial, fungal and archaeal communities, respectively. Soil physicochemistry and soil niche explained over 50% of the variation in community structure, and communities displayed strong non-random patterns of co-occurrence. Taken together, these results demonstrate that in central Namib Desert soil microbial communities, assembly is principally driven by deterministic processes.

Transition from arid to hyper-arid environment in the southern Levant deserts as recorded by early Pleistocene cummulic Aridisols

NASA Astrophysics Data System (ADS)

Amit, Rivka; Simhai, Ori; Ayalon, Avner; Enzel, Yehouda; Matmon, Ari; Crouvi, Onn; Porat, Naomi; McDonald, Eric

2011-02-01

The time at which deserts established their current arid or hyper-arid conditions remains a fundamental question regarding the history of Earth. Cosmogenic isotope exposure ages of desert pavement and welded, calcic-gypsic-salic Reg soils that developed on relatively flat alluvial surfaces ˜2 Ma ago in the Negev Desert indicate long geomorphic stability under extremely dry conditions. Over a short interval during their initial stage of development between 1-2 Ma, these cumulative soils are characterized by calcic soils reaching maximum stage III of carbonate morphology. This interval is the only period when calcic soil horizons formed on stable abandoned alluvial surfaces in the southern Negev Desert. Since ˜1 Ma pedogenesis changed toward more arid soil environment and the formation of gypsic-salic soil horizons that were later followed by dust accumulation. The dichotomy of only moderately-developed calcic soil (stages II-III) during a relatively long time interval (10 5-10 6 years) indicates an arid environment that does not support continuous development but only occasional calcic soil formation. The very low δ18O and relatively high δ13C values of these early pedogenic carbonates support soil formation under arid climatic conditions. Such an environment was probably characterized by rare and relatively longer duration rainstorms which occasionally allowed deeper infiltration of rainwater and longer retention of soil moisture. This, in turn enabled the growth of sparse vegetation that enhanced deposition of pedogenic carbonate. At ˜1 Ma these rare events of slightly wetter conditions ceased and less atmospheric moisture reached the southern Negev Desert leading to deposition of soluble salts and dust deposited in the soils. The combination of long-term hyperaridity, scarcity of vegetation and lack of bioturbation, salts cementation, dust accumulation and tight desert pavement cover, has protected the surfaces from erosion forming one of the most remarkably stable landscapes on Earth, a landscape that essentially has not eroded, but accumulated salt and dust for more than 10 6 yr.

Soil formation in the Tsauchab Valley, Namibia

NASA Astrophysics Data System (ADS)

Eden, Marie; Bens, Oliver; Ramisch, Arne; Schwindt, Daniel; Völkel, Jörg

2016-04-01

The BMBF-funded project GeoArchives (Spaces) investigates soils and sediments in Southern Africa. A focus area lies on the Tsauchab Valley (Namibia), South of the Naukluft mountain range (24°26'40'' S, 16°10'40'' E). On a gently sloping alluvial fan facing East towards the river, the surface is characterized by a desert pavement covering soils used as farmland. The landscape units were mapped and the area at the lower slope of a hill was divided into three units: a rinsing surface and a gravel plain, separated by a channel. On these surfaces soil profiles were excavated. Profile description followed the German system (Bodenkundliche Kartieranleitung KA 5) and disturbed samples were taken at various depths and analysed in the lab. Undisturbed soil cores with a volume of 100 cm³ were taken just below the surface at a depth of ~1-6 cm. Lab analyses included texture and gravel content, colour, pH, electrical conductivity, carbonates, CNS, cation exchange capacity, pedogenic oxides, main and trace elements (XRF), and clay mineral distribution (XRD). Undisturbed samples were used to determine soil water retention curve, air permeability and bulk density. The profiles revealed moderately developed cambic soils rich in clay minerals and with total carbon contents ranging up to 1.8 %, bearing shrubs and after episodic rainfall a dense grass vegetation. Their genesis is discussed and interpreted in the context of the landscape and climate history of this semi-desert environment.

Habitability & Astrobiology Research in Mars Terrestrial Analogues

NASA Astrophysics Data System (ADS)

Foing, Bernard

2014-05-01

We performed a series of field research campaigns (ILEWG EuroMoonMars) in the extreme Utah desert relevant to Mars environments, and in order to help in the interpretation of Mars missions measurements from orbit (MEX, MRO) or from the surface (MER, MSL), or Moon geochemistry (SMART-1, LRO). We shall give an update on the sample analysis in the context of habitability and astrobiology. Methods & Results: In the frame of ILEWG EuroMoonMars campaigns (2009 to 2013) we deployed at Mars Desert Research station, near Hanksville Utah, a suite of instruments and techniques [A, 1, 2, 9-11] including sample collection, context imaging from remote to local and microscale, drilling, spectrometers and life sensors. We analyzed how geological and geochemical evolution affected local parameters (mineralogy, organics content, environment variations) and the habitability and signature of organics and biota. Among the important findings are the diversity in the composition of soil samples even when collected in close proximity, the low abundances of detectable PAHs and amino acids and the presence of biota of all three domains of life with significant heterogeneity. An extraordinary variety of putative extremophiles was observed [3,4,9]. A dominant factor seems to be soil porosity and lower clay-sized particle content [6-8]. A protocol was developed for sterile sampling, contamination issues, and the diagnostics of biodiversity via PCR and DGGE analysis in soils and rocks samples [10, 11]. We compare the 2009 campaign results [1-9] to new measurements from 2010-2013 campaigns [10-12] relevant to: comparison between remote sensing and in-situ measurements; the study of minerals; the detection of organics and signs of life. Keywords: field analogue research, astrobiology, habitability, life detection, Earth-Moon-Mars, organics References [A] Foing, Stoker & Ehrenfreund (Editors, 2011) "Astrobiology field Research in Moon/Mars Analogue Environments", Special Issue of International Journal of Astrobiology , IJA 2011, 10, vol. 3. 137-305 [1] Foing B. et al. (2011) Field astrobiology research at Moon-Mars analogue site: Instruments and methods, IJA 2011, 10 (3), 141;[2] Clarke, J., Stoker, C. Concretions in exhumed & inverted channels near Hanksville Utah: implications for Mars, (IJA 2011, 10 (3), 162;[3] Thiel et al., (2011) PCR-based analysis of microbial communities during the EuroGeoMars campaign at Mars Desert Research Station, Utah. (IJA 2011, 10 (3), 177;[4] Direito et al. (2011). A wide variety of putative extremophiles and large beta-diversity at the Mars Desert Research Station (Utah). (IJA 2011, 10 (3), 191;[5] Orzechowska, G. et al (20110 analysis of Mars Analog soils using solid Phase Microextraction, Organics solvent extraction and GCMS, (IJA 2011, 10 (3), 209; [6] Kotler et al. (2011). Analysis of mineral matrices of planetary soils analogs from the Utah Desert. (IJA 2011, 10 (3), 221; [7] Martins et al. (2011). Extraction of amino acids from soils close to the Mars Desert Research Station (MDRS), Utah. (IJA 2011, 10 (3), 231; [8] Ehrenfreund et al. (2011) Astrobiology and habitability studies in preparation for future Mars missions: trends from investigating minerals, organics and biota. (IJA 2011, 10 (3), 239; [9] Stoker C. et al (2011) Mineralogical, Chemical, Organic & Microbial Properties of Subsurface Soil Cores from Mars Desert Research Station, a Phyllosilicate and Sulfate Rich Mars Analog Site, IJA 2011, 10 (3), 269; [10] Rodrigues L. et al (2014, in preparation) Preventing biocontamination during sterile sampling; [11] Rodrigues L. et al (2014, in preparation) Microbial diversity in MDRS rocks and soils; [12] ILEWG EuroMoonMars Team, (2014, special issue in preparation) Results from ILEWG EuroMoonMars campaign 2013 **Acknowledgements: B.H.Foing (1, 2, 6), C. Stoker (3), P. Ehrenfreund (4, 5), I. Rammos (2), L. Rodrigues (2), A. Svendsen (2), D. Oltheten (2), K. Nebergall (6), M. Battler (6, 7), H. v't Houd (8), A. Bruneau (6,9), M. Cross (6,7), V. Maivald (10), C. Orgel (6), A. Elsaesser (4), S.O.L. Direito (2,4), W.F.M. Röling (2), G.R. Davies (2); EuroGeoMars2009 Team, DOMMEX-ILEWG EuroMoonMars 2010-2013 Teams (1) ESA/ ESTEC, Postbus 299, 2200 AG Noordwik, NL; (2) Vrije Universiteit, Amsterdam, NL; (3) NASA Ames Research Centre; US; (4) Leiden U. , NL; (5) Space Policy Institute, GWU, Washington D.C., USA; (6) ILEWG; (7) CPSX; (8) Cerberus Blackshore, ESIC Noordwijk, NL; (9) ENSC Bordeaux; (10) DLR, Bremen

Significant Impacts of Increasing Aridity on the Arid Soil Microbiome.

PubMed

Neilson, Julia W; Califf, Katy; Cardona, Cesar; Copeland, Audrey; van Treuren, Will; Josephson, Karen L; Knight, Rob; Gilbert, Jack A; Quade, Jay; Caporaso, J Gregory; Maier, Raina M

2017-01-01

Global deserts occupy one-third of the Earth's surface and contribute significantly to organic carbon storage, a process at risk in dryland ecosystems that are highly vulnerable to climate-driven ecosystem degradation. The forces controlling desert ecosystem degradation rates are poorly understood, particularly with respect to the relevance of the arid-soil microbiome. Here we document correlations between increasing aridity and soil bacterial and archaeal microbiome composition along arid to hyperarid transects traversing the Atacama Desert, Chile. A meta-analysis reveals that Atacama soil microbiomes exhibit a gradient in composition, are distinct from a broad cross-section of nondesert soils, and yet are similar to three deserts from different continents. Community richness and diversity were significantly positively correlated with soil relative humidity (SoilRH). Phylogenetic composition was strongly correlated with SoilRH, temperature, and electrical conductivity. The strongest and most significant correlations between SoilRH and phylum relative abundance were observed for Acidobacteria , Proteobacteria , Planctomycetes , Verrucomicrobia , and Euryarchaeota (Spearman's rank correlation [ r s ] = >0.81; false-discovery rate [ q ] = ≤0.005), characterized by 10- to 300-fold decreases in the relative abundance of each taxon. In addition, network analysis revealed a deterioration in the density of significant associations between taxa along the arid to hyperarid gradient, a pattern that may compromise the resilience of hyperarid communities because they lack properties associated with communities that are more integrated. In summary, results suggest that arid-soil microbiome stability is sensitive to aridity as demonstrated by decreased community connectivity associated with the transition from the arid class to the hyperarid class and the significant correlations observed between soilRH and both diversity and the relative abundances of key microbial phyla typically dominant in global soils. IMPORTANCE We identify key environmental and geochemical factors that shape the arid soil microbiome along aridity and vegetation gradients spanning over 300 km of the Atacama Desert, Chile. Decreasing average soil relative humidity and increasing temperature explain significant reductions in the diversity and connectivity of these desert soil microbial communities and lead to significant reductions in the abundance of key taxa typically associated with fertile soils. This finding is important because it suggests that predicted climate change-driven increases in aridity may compromise the capacity of the arid-soil microbiome to sustain necessary nutrient cycling and carbon sequestration functions as well as vegetative cover in desert ecosystems, which comprise one-third of the terrestrial biomes on Earth.

Role of biological soil crusts in desert hydrology and geomorphology: Implications for military training operations

Treesearch

Steven D. Warren

2014-01-01

Biological soil crusts, composed of soil surfaces stabilized by a consortium of cyanobacteria, algae, fungi, lichens, and/or bryophytes, are common in most deserts and perform functions of primary productivity, nitrogen fixation, nutrient cycling, water redistribution, and soil stabilization. The crusts are highly susceptible to disturbance. The degree of perturbation...

Investigation of microbial diversity in a desert Mars-like environment: Mars Desert Research Station (MDRS), Utah

NASA Astrophysics Data System (ADS)

Direito, Maria Susana; Staats, Martijn; Foing, Bernard H.; Ehrenfreund, Pascale; Roling, Wilfred

The Utah Mars Desert Research Station (MDRS) harbours geo-morphology and geo-processes analogues to the planet Mars. Soil samples were collected during the EuroGeoMars campaign (from 24 January to 1 March 2009) from different locations and depths [1]. Samples were distributed among scientific collaborator institutes for analysis of microbial diversity, amino acid content and degradation, content of PAH or larger organic molecules, and respective soil properties. Our sample analysis had the objective of characterizing the microbial communities in this Mars analogue: DNA isolation, PCR (Polymerase Chain Reaction) using primers for DNA amplification of Bacteria, Archaea and Eukarya ribosomal RNA (rRNA) gene fragments, DGGE (Denaturing Gradient Gel Electrophoresis) and clone library construction with the final aim of sequencing. Results indicate that life is present in all the three domains of life (Archaea, Bacteria and Eukarya), while the most diversity was found in the domain Bacteria. Microorgan-isms are heterogeneously present and their identities are currently investigated. The obtained information will be later related to the other scientific analysis in order to obtain a better understanding of this Mars analogue site, which in turn will provide important information for the search for life on Mars. [1] Foing, B.H. et al . (2009). Exogeolab lander/rover instruments and EuroGeoMars MDRS campaign. LPI, 40, 2567.

Analysing the mechanisms of soil water and vapour transport in the desert vadose zone of the extremely arid region of northern China

NASA Astrophysics Data System (ADS)

Du, Chaoyang; Yu, Jingjie; Wang, Ping; Zhang, Yichi

2018-03-01

The transport of water and vapour in the desert vadose zone plays a critical role in the overall water and energy balances of near-surface environments in arid regions. However, field measurements in extremely dry environments face many difficulties and challenges, so few studies have examined water and vapour transport processes in the desert vadose zone. The main objective of this study is to analyse the mechanisms of soil water and vapour transport in the desert vadose zone (depth of ∼350 cm) by using measured and modelled data in an extremely arid environment. The field experiments are implemented in an area of the Gobi desert in northwestern China to measure the soil properties, daily soil moisture and temperature, daily water-table depth and temperature, and daily meteorological records from DOYs (Days of Year) 114-212 in 2014 (growing season). The Hydrus-1D model, which simulates the coupled transport of water, vapour and heat in the vadose zone, is employed to simulate the layered soil moisture and temperature regimes and analyse the transport processes of soil water and vapour. The measured results show that the soil water and temperatures near the land surface have visible daily fluctuations across the entire soil profile. Thermal vapour movement is the most important component of the total water flux and the soil temperature gradient is the major driving factor that affects vapour transport in the desert vadose zone. The most active water and heat exchange occurs in the upper soil layer (depths of 0-25 cm). The matric potential change from the precipitation mainly re-draws the spatio-temporal distribution of the isothermal liquid water in the soil near the land surface. The matric potential has little effect on the isothermal vapour and thermal liquid water flux. These findings offer new insights into the liquid water and vapour movement processes in the extremely arid environment.

Consumption of atmospheric methane by desert soils

USGS Publications Warehouse

Striegl, Robert G.; McConnaughey, T.A.; Thorstenson, D.C.; Weeks, E.P.; Woodward, J.C.

1992-01-01

ATMOSPHERIC concentrations of methane, a greenhouse gas, are increasing at a rate of about 1% yr-1 (refs 1-4). Oxidation by methylotrophic bacteria in soil is the largest terrestrial sink for atmospheric CH4, and is estimated to consume about 30?? 1012 g CH4 yr-1 (refs 4-6). Spatial and temporal variability in the rate of soil CH4 consumption are incompletely understood6-19, as are the apparent inhibitory12,13,18 or enhancing20 effects of changes in land use. Dry deserts, which constitute 20% of total land surface, are not currently included in global soil uptake estimates. Here we describe measurements of the rate of uptake of atmospheric CH4 by undisturbed desert soils. We observed rates as great as 4.38 mg CH4 m-2 day-1; 50% of the measured rates were between 0.24 and 0.92 mg CH4 m2 d-1. Uptake of CH4 by desert soil is enhanced by rainfall after an initial soil-drainage period - opposite to the response of temperate forest soils12. Methane is consumed to a depth of about 2 m, allowing for deep removal of atmospheric CH4 if near-surface conditions are unfavourable for consumption. On the basis of an annual average CH4 consumption rate of 0.66 mg CH4 m-2 d-1, we estimate that the global CH4 sink term needs to be increased by about 7 ?? 1012 g yr-1 to account for the contribution of desert soils.

Masten Space Systems’ Completes Test of Surface Sampling Technology

NASA Image and Video Library

2018-06-13

Honeybee Robotics in Pasadena, California, flight tested its pneumatic sampler collection system, PlanetVac, on Masten Space Systems’ Xodiac rocket on May 24, launching from Mojave, California, and landing to collect a sample of more than 320 grams of top soil from the surface of the desert floor. NASA Flight Opportunities program funded the test flight.

Soil water availability and microsite mediate fungal and bacterial phospholipid fatty acid biomarker abundances in Mojave Desert soils exposed to elevated atmospheric CO2

NASA Astrophysics Data System (ADS)

Jin, V. L.; Schaeffer, S. M.; Ziegler, S. E.; Evans, R. D.

2011-06-01

Changes in the rates of nitrogen (N) cycling, microbial carbon (C) substrate use, and extracellular enzyme activities in a Mojave Desert ecosystem exposed to elevated atmospheric CO2 suggest shifts in the size and/or functional characteristics of microbial assemblages in two dominant soil microsites: plant interspaces and under the dominant shrub Larrea tridentata. We used ester-linked phospholipid fatty acid (PLFA) biomarkers as a proxy for microbial biomass to quantify spatial and temporal differences in soil microbial communities from February 2003 to May 2005. Further, we used the 13C signature of the fossil CO2 source for elevated CO2 plots to trace recent plant C inputs into soil organic matter (SOM) and broad microbial groups using δ13C (‰). Differences between individual δ13CPLFA and δ13CSOM for fungal biomarkers indicated active metabolism of newer C in elevated CO2 soils. Total PLFA-C was greater in shrub microsites compared to plant interspaces, and CO2 treatment differences within microsites increased under higher soil water availability. Total, fungal, and bacterial PLFA-C increased with decreasing soil volumetric water content (VWC) in both microsites, suggesting general adaptations to xeric desert conditions. Increases in fungal-to-bacterial PLFA-C ratio with decreasing VWC reflected functional group-specific responses to changing soil water availability. While temporal and spatial extremes in resource availability in desert ecosystems contribute to the difficulty in identifying common trends or mechanisms driving microbial responses in less extreme environments, we found that soil water availability and soil microsite interacted with elevated CO2 to shift fungal and bacterial biomarker abundances in Mojave Desert soils.

Tritium in water vapor in the shallow unsaturated zone at the Amargosa Desert Research Site

USGS Publications Warehouse

Healy, Richard W.; Striegl, Robert G.; Michel, Robert L.; Prudic, David E.; Andraski, Brian J.; Morganwalp, David W.; Buxton, Herbert T.

1999-01-01

Samples of water vapor in soil gas were obtained at the U.S. Geological Survey's Amargosa Desert Research Site in 1997 and 1998 from a depth of 1.5 m (meters) within a 300 m by 300 m grid that lies immediately to the south and west of a low-level radioactive-waste disposal site. The gas samples were analyzed for tritium. Fifty-eight samples were collected in May 1997; 61 samples were collected in June 1998. Measured tritium concentrations ranged from 16 ± 9 TU (tritium units) to 36,900 ± 300 TU in 1997, and from 6 ± 6 TU to 37,360 ± 450 TU in 1998. Concentrations decreased from northeast to southwest across the grid. In general, there was very little difference in tritium concentrations between the two sampling periods.

Transitory microbial habitat in the hyperarid Atacama Desert

PubMed Central

Schulze-Makuch, Dirk; Wagner, Dirk; Mangelsdorf, Kai; Devine, Kevin G.; de Vera, Jean-Pierre; Parro, Victor; Kaupenjohann, Martin; Galy, Albert; Schneider, Beate; Airo, Alessandro; Frösler, Jan; Davila, Alfonso F.; Arens, Felix L.; Cáceres, Luis; Cornejo, Francisco Solís; Carrizo, Daniel; Dartnell, Lewis; DiRuggiero, Jocelyne; Ganzert, Lars; Gessner, Mark O.; Grathwohl, Peter; Guan, Lisa; Heinz, Jacob; Hess, Matthias; Keppler, Frank; Maus, Deborah; McKay, Christopher P.; Meckenstock, Rainer U.; Montgomery, Wren; Oberlin, Elizabeth A.; Probst, Alexander J.; Sáenz, Johan S.; Sattler, Tobias; Schirmack, Janosch; Sephton, Mark A.; Schloter, Michael; Uhl, Jenny; Valenzuela, Bernardita; Vestergaard, Gisle; Wörmer, Lars; Zamorano, Pedro

2018-01-01

Traces of life are nearly ubiquitous on Earth. However, a central unresolved question is whether these traces always indicate an active microbial community or whether, in extreme environments, such as hyperarid deserts, they instead reflect just dormant or dead cells. Although microbial biomass and diversity decrease with increasing aridity in the Atacama Desert, we provide multiple lines of evidence for the presence of an at times metabolically active, microbial community in one of the driest places on Earth. We base this observation on four major lines of evidence: (i) a physico-chemical characterization of the soil habitability after an exceptional rain event, (ii) identified biomolecules indicative of potentially active cells [e.g., presence of ATP, phospholipid fatty acids (PLFAs), metabolites, and enzymatic activity], (iii) measurements of in situ replication rates of genomes of uncultivated bacteria reconstructed from selected samples, and (iv) microbial community patterns specific to soil parameters and depths. We infer that the microbial populations have undergone selection and adaptation in response to their specific soil microenvironment and in particular to the degree of aridity. Collectively, our results highlight that even the hyperarid Atacama Desert can provide a habitable environment for microorganisms that allows them to become metabolically active following an episodic increase in moisture and that once it decreases, so does the activity of the microbiota. These results have implications for the prospect of life on other planets such as Mars, which has transitioned from an earlier wetter environment to today’s extreme hyperaridity. PMID:29483268

Transitory microbial habitat in the hyperarid Atacama Desert.

PubMed

Schulze-Makuch, Dirk; Wagner, Dirk; Kounaves, Samuel P; Mangelsdorf, Kai; Devine, Kevin G; de Vera, Jean-Pierre; Schmitt-Kopplin, Philippe; Grossart, Hans-Peter; Parro, Victor; Kaupenjohann, Martin; Galy, Albert; Schneider, Beate; Airo, Alessandro; Frösler, Jan; Davila, Alfonso F; Arens, Felix L; Cáceres, Luis; Cornejo, Francisco Solís; Carrizo, Daniel; Dartnell, Lewis; DiRuggiero, Jocelyne; Flury, Markus; Ganzert, Lars; Gessner, Mark O; Grathwohl, Peter; Guan, Lisa; Heinz, Jacob; Hess, Matthias; Keppler, Frank; Maus, Deborah; McKay, Christopher P; Meckenstock, Rainer U; Montgomery, Wren; Oberlin, Elizabeth A; Probst, Alexander J; Sáenz, Johan S; Sattler, Tobias; Schirmack, Janosch; Sephton, Mark A; Schloter, Michael; Uhl, Jenny; Valenzuela, Bernardita; Vestergaard, Gisle; Wörmer, Lars; Zamorano, Pedro

2018-03-13

Traces of life are nearly ubiquitous on Earth. However, a central unresolved question is whether these traces always indicate an active microbial community or whether, in extreme environments, such as hyperarid deserts, they instead reflect just dormant or dead cells. Although microbial biomass and diversity decrease with increasing aridity in the Atacama Desert, we provide multiple lines of evidence for the presence of an at times metabolically active, microbial community in one of the driest places on Earth. We base this observation on four major lines of evidence: ( i ) a physico-chemical characterization of the soil habitability after an exceptional rain event, ( ii ) identified biomolecules indicative of potentially active cells [e.g., presence of ATP, phospholipid fatty acids (PLFAs), metabolites, and enzymatic activity], ( iii ) measurements of in situ replication rates of genomes of uncultivated bacteria reconstructed from selected samples, and ( iv ) microbial community patterns specific to soil parameters and depths. We infer that the microbial populations have undergone selection and adaptation in response to their specific soil microenvironment and in particular to the degree of aridity. Collectively, our results highlight that even the hyperarid Atacama Desert can provide a habitable environment for microorganisms that allows them to become metabolically active following an episodic increase in moisture and that once it decreases, so does the activity of the microbiota. These results have implications for the prospect of life on other planets such as Mars, which has transitioned from an earlier wetter environment to today's extreme hyperaridity. Copyright © 2018 the Author(s). Published by PNAS.

Transitory microbial habitat in the hyperarid Atacama Desert

NASA Astrophysics Data System (ADS)

Schulze-Makuch, Dirk; Wagner, Dirk; Kounaves, Samuel P.; Mangelsdorf, Kai; Devine, Kevin G.; de Vera, Jean-Pierre; Schmitt-Kopplin, Philippe; Grossart, Hans-Peter; Parro, Victor; Kaupenjohann, Martin; Galy, Albert; Schneider, Beate; Airo, Alessandro; Frösler, Jan; Davila, Alfonso F.; Arens, Felix L.; Cáceres, Luis; Solís Cornejo, Francisco; Carrizo, Daniel; Dartnell, Lewis; DiRuggiero, Jocelyne; Flury, Markus; Ganzert, Lars; Gessner, Mark O.; Grathwohl, Peter; Guan, Lisa; Heinz, Jacob; Hess, Matthias; Keppler, Frank; Maus, Deborah; McKay, Christopher P.; Meckenstock, Rainer U.; Montgomery, Wren; Oberlin, Elizabeth A.; Probst, Alexander J.; Sáenz, Johan S.; Sattler, Tobias; Schirmack, Janosch; Sephton, Mark A.; Schloter, Michael; Uhl, Jenny; Valenzuela, Bernardita; Vestergaard, Gisle; Wörmer, Lars; Zamorano, Pedro

2018-03-01

Traces of life are nearly ubiquitous on Earth. However, a central unresolved question is whether these traces always indicate an active microbial community or whether, in extreme environments, such as hyperarid deserts, they instead reflect just dormant or dead cells. Although microbial biomass and diversity decrease with increasing aridity in the Atacama Desert, we provide multiple lines of evidence for the presence of an at times metabolically active, microbial community in one of the driest places on Earth. We base this observation on four major lines of evidence: (i) a physico-chemical characterization of the soil habitability after an exceptional rain event, (ii) identified biomolecules indicative of potentially active cells [e.g., presence of ATP, phospholipid fatty acids (PLFAs), metabolites, and enzymatic activity], (iii) measurements of in situ replication rates of genomes of uncultivated bacteria reconstructed from selected samples, and (iv) microbial community patterns specific to soil parameters and depths. We infer that the microbial populations have undergone selection and adaptation in response to their specific soil microenvironment and in particular to the degree of aridity. Collectively, our results highlight that even the hyperarid Atacama Desert can provide a habitable environment for microorganisms that allows them to become metabolically active following an episodic increase in moisture and that once it decreases, so does the activity of the microbiota. These results have implications for the prospect of life on other planets such as Mars, which has transitioned from an earlier wetter environment to today’s extreme hyperaridity.

Ecological restoration and recovery in the wind-blown sand hazard areas of northern China: relationship between soil water and carrying capacity for vegetation in the Tengger Desert.

PubMed

Li, XingRong; Zhang, ZhiShan; Tan, HuiJuan; Gao, YanHong; Liu, LiChao; Wang, XingPing

2014-05-01

The main prevention and control area for wind-blown sand hazards in northern China is about 320000 km(2) in size and includes sandlands to the east of the Helan Mountain and sandy deserts and desert-steppe transitional regions to the west of the Helan Mountain. Vegetation recovery and restoration is an important and effective approach for constraining wind-blown sand hazards in these areas. After more than 50 years of long-term ecological studies in the Shapotou region of the Tengger Desert, we found that revegetation changed the hydrological processes of the original sand dune system through the utilization and space-time redistribution of soil water. The spatiotemporal dynamics of soil water was significantly related to the dynamics of the replanted vegetation for a given regional precipitation condition. The long-term changes in hydrological processes in desert areas also drive replanted vegetation succession. The soil water carrying capacity of vegetation and the model for sand fixation by revegetation in aeolian desert areas where precipitation levels are less than 200 mm are also discussed.

[Deuterium isotope characteristics of precipitation infiltrated in the West Ordos Desert of Inner Mongolia, China].

PubMed

Chen, Jie; Xu, Qing; Gao, De Qiang; Ma, Ying Bin; Zhang, Bei Bei; Hao, Yu Guang

2017-07-18

Understanding the soil-profile temporal and spatial distribution of rainwater in arid and semiarid regions provides a scientific basis for the restoration and maintenance of degraded desert ecosystems in the West Ordos Desert of Inner Mongolia, China. In this study, the deuterium isotope (δD) value of rainwater, soil water, and groundwater were examined in the West Ordos Desert. The contribution of precipitation to soil water in each layer of the soil profile was calculated with two-end linear mixed model. In addition, the temporal and spatial distribution of δD of soil water in the soil profile was analyzed under different-intensity precipitation. The results showed that small rainfall events (0-10 mm) affected the soil moisture and the δD value of soil water in surface soil (0-10 cm). About 30.3% to 87.9% of rainwater was kept in surface soil for nine days following the rainfall event. Medium rainfall events (10-20 mm) influenced the soil moisture and the δD value of soil water at soil depth of 0-40 cm. About 28.2% to 80.8% of rainwater was kept in soil layer of 0-40 cm for nine days following the medium rainfall event. Large (20-30 mm) and extremely large (＞30 mm) rainfall events considerably influenced the soil moisture and δD value of soil water in each of the soil layers, except for the 100-150 cm layer. The δD value of soil water was between those δD values of rainwater and groundwater, which suggested that precipitation and groundwater were the sources of soil water in the West Ordos Desert. Under the same intensity rainfall, the δD value of surface soil water (0-10 cm) was directly affected by δD of rainwater. With increasing soil depth, the variation of soil water δD decreased, and the soil water of 100-150 cm kept stable. With increasing intensity of precipitation, the influence of precipitation on soil water δD lasted for a longer duration and occurred at a deeper soil depth.

Cyanobacterial composition and spatial distribution based on pyrosequencing data in the Gurbantunggut Desert, Northwestern China.

PubMed

Zhang, Bingchang; Li, Renhui; Xiao, Peng; Su, Yangui; Zhang, Yuanming

2016-03-01

Cyanobacteria are the primary colonizers and form a dominant component of soil photosynthetic communities in biological soil crusts. They are crucial in improving soil environments, namely accumulating soil carbon and nitrogen. Many classical studies have examined cyanobacterial diversity in desert crusts, but relatively few comprehensive molecular surveys have been conducted. We used 454 pyrosequencing of 16S rRNA to investigate cyanobacterial composition and distribution on regional scales in the Gurbantunggut Desert. The relationship between cyanobacterial distribution and environmental factors was also explored. A total of 24,973 cyanobacteria partial 16S rRNA gene sequences were obtained, and 507OTUs were selected, as most OTUs had very few reads. Among these, 347 OTU sequences were of cyanobacteria origin, belonging to Oscillatoriales, Nostocales, Chroococcales, and uncultured cyanobacterium clone, respectively. Microcoleus vaginatus, Chroococcidiopsis spp. and M. steenstrupii were the dominant species in most areas of the Gurbantunggut Desert. Compared with other desert, the Gurbantunggut Desert differed in the prominence of Chroococcidiopsis spp. and lack of Pseudanabaenales. Species composition and abundance of cyanobacteria also showed distinct variations. Soil texture, precipitation, and nutrients and salt levels affected cyanobacterial distribution. Increased precipitation was helpful in improving cyanobacterial diversity. A higher content of coarse sand promoted the colonization and growth of Oscillatoriales and some phylotypes of Chroococcales. The fine-textured soil with higher nutrients and salts supported more varied populations of cyanobacteria, namely some heterocystous cyanobacteria. The results suggested that the Gurbantunggut Desert was rich in cyanobacteria and that precipitation was a primary regulating factor for cyanobacterial composition on a regional scale. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Water and vapor transfer in vadose zone of Gobi desert and riparian in the hyper arid environment of Ejina, China

NASA Astrophysics Data System (ADS)

Du, C.; Yu, J.; Sun, F.; Liu, X.

2015-12-01

To reveal how water and vapor transfer in vadose zone affect evapotranspiration in Gobi desert and riparian in hyper arid region is important for understanding eco-hydrological process. Field studies and numerical simulations were imported to evaluate the water and vapor movement processes under non isothermal and lower water content conditions. The soil profiles (12 layers) in Gobi desert and riparian sites of Ejina were installed with sensors to monitor soil moisture and temperature for 1 year. The meteorological conditions and water table were measured by micro weather stations and mini-Divers respectively in the two sites. Soil properties, including particles composition, moisture, bulk density, water retention curve, and saturated hydraulic conductivity of two site soil profiles, was measured. The observations showed that soil temperatures for the two sites displayed large diurnal and seasonal fluctuations. Temperature gradients with depth resulted in a downward in summer and upward in winter and became driving force for thermal vapor movement. Soil moistures in Gobi desert site were very low and varied slowly with time. While the soil moistures in riparian site were complicated due to root distribution but water potentials remained uniform with time. The hydrus-1D was employed to simulate evapotranspiration processes. The simulation results showed the significant difference of evaporation rate in the Gobi desert and riparian sites.

Biological soil crusts in deserts: A short review of their role in soil fertility, stabilization, and water relations

USGS Publications Warehouse

Belnap, Jayne

2003-01-01

Cyanobacteria and cyanolichens dominate most desert soil surfaces as the major component of biological soil crusts (BSC). BSCs contribute to soil fertility in many ways. BSC can increase weathering of parent materials by up to 100 times. Soil surface biota are often sticky, and help retain dust falling on the soil surface; this dust provides many plant-essential nutrients including N, P, K, Mg, Na, Mn, Cu, and Fe. BSCs also provide roughened soil surfaces that slow water runoff and aid in retaining seeds and organic matter. They provide inputs of newly-fixed carbon and nitrogen to soils. They are essential in stabilizing soil surfaces by linking soil particles together with filamentous sheaths, enabling soils to resist both water and wind erosion. These same sheaths are important in keeping soil nutrients from becoming bound into plant-unavailable forms. Experimental disturbances applied in US deserts show soil surface impacts decrease N and C inputs from soil biota by up to 100%. The ability to hold aeolian deposits in place is compromised, and underlying soils are exposed to erosion. While most undisturbed sites show little sediment production, disturbance by vehicles or livestock produces up to 36 times more sediment production, with soil movement initiated at wind velocities well below commonly-occurring wind speeds. Winds across disturbed areas can quickly remove this material from the soil surface, thereby potentially removing much of current and future soil fertility. Thus, reduction in the cover of cyanophytes in desert soils can both reduce fertility inputs and accelerate fertility losses.

Are biological effects of desert shrubs more important than physical effects on soil microorganisms?

PubMed

Berg, Naama; Steinberger, Yosef

2010-01-01

Vegetation cover plays a major role in providing organic matter and in acting as a physical barrier, with both together contributing to the formation of "fertile islands," which play an active role in prolonging biological activity in desert ecosystems. By undertaking this study, a longterm research, we designed an experiment to separate the two components-the physical and biotic parts of the perennial plants-and to identify the factor that contributes the most to the ecosystem. The study site was located in the northern Negev Desert, Israel, where 50 Hammada scoparia shrubs and 50 artificial plants were randomly marked. Soil samples were collected monthly over 3 years of research at three locations: under the canopy of H. scoparia shrubs, in the vicinity of the artificial plants, and between the shrubs (control). The contribution to microbial activity was measured by evaluation of the microbial community functions in soil. The functional aspects of the microbial community that were measured were CO2 evolution, microbial biomass, microbial functional diversity, and the physiological profile of the community. The results of this study are presented in two ways: (1) according to the three locations/treatments; and (2) according to the phenological situation of the vegetation (annual and perennial plants) in the research field: the growing phase, the drying process, and the absence of annual plants. The only parameters that were found to affect microbial activity were the contribution of the organic matter of perennial shrubs and the growth of vegetation (annual and perennial) during the growing seasons. The physical component was found to have no effect on soil microbial functional diversity, which elucidates the important contribution of the desert shrub in enhancing biological multiplicity and activity.

[Soil infiltration of snowmelt water in the southern Gurbantunggut Desert, Xinjiang, China].

PubMed

Hu, Shun-jun; Chen, Yong-bao; Zhu, Hai

2015-04-01

Soil infiltration of snow-melt water is an important income item of water balance in arid desert. The soil water content in west slope, east slope and interdune of sand dune in the southern Gurbantunggut Desert was monitored before snowfall and after snow melting during the winters of 2012-2013 and 2013-2014. According to the principle of water balance, soil infiltration of snow-melt in the west slope, east slope, interdune and landscape scale was calculated, and compared with the results measured by cylinder method. The results showed that the soil moisture recharge from unfrozen layer of unsaturated soil to surface frozen soil was negligible because the soil moisture content before snowfall was lower, soil infiltration of snow-melt water was the main source of soil water of shallow soil, phreatic water did not evaporate during freezing period, and did not get recharge after the snow melting. Snowmelt water in the west slope, east slope, interdune and landscape scale were 20-43, 27-43, 32-45, 26-45 mm, respectively.

Variations in water balance and recharge potential at three western desert sites

USGS Publications Warehouse

Gee, G.W.; Wierenga, P.J.; Andraski, Brian J.; Young, M.H.; Fayer, M.J.; Rockhold, M.L.

1994-01-01

Radioactive and hazardous waste landfills exist at numerous desert locations in the USA. At these locations, annual precipitation is low and soils are generally dry, yet little is known about recharge of water and transport of contaminants to the water table. Recent water balance measurements made at three desert locations, Las Cruces, NM, Beatty, NV, and the U.S. Department of Energy's Hanford Site in the state of Washington, provide information on recharge potential under three distinctly different climate and soil conditions. All three sites show water storage increases with time when soils are coarse textured and plants are removed from the surface, the rate of increase being influenced by climatic variables such as precipitation, radiation, temperature, and wind. Lysimeter data from Hanford and Las Cruces indicate that deep drainage (recharge) from bare, sandy soils can range from 10 to >50% of the annual precipitation. At Hanford, when desert plants are present on sandy or gravelly surface soils, deep drainage is reduced but not eliminated. When surface soils are silt loams, deep drainage is eliminated whether plants are present or not. At Las Cruces and Beatty, the presence of plants eliminated deep drainage at the measurement sites. Differences in water balance between sites are attributed to precipitation quantity and distribution and to soil and vegetation types. The implication for waste management at desert locations is that surface soil properties and plant characteristics must be considered in waste site design in order to minimize recharge potential.

VARIABILITY IN SOILS AND VEGETATION ASSOCIATED WITH HARVESTER ANT (POGONOMYRMEX RUGOSUS) NESTS ON A CHIHUAHUAN DESERT WATERSHED

EPA Science Inventory

The effects of harvester ant (Pogonomyrmex rugosus) nests on the density and cover of spring annual plants and on soil characteristics were measured at three locations characterized by different soils and dominant vegetation on a desert watershed. There were few differences in ve...

Landscape position moderates how ant nests affect hydrology and soil chemistry across a Chihuahuan Desert watershed

USDA-ARS?s Scientific Manuscript database

Ants moderate the supply of critical resources such as water and nutrients in desert environments by changing the physical arrangement of soils during nest construction. We measured water infiltration and soil physical and chemical properties on and off the nests of two ant species (Pogonomyrmex rug...

Soil stabilization by a prokaryotic desert crust - Implications for Precambrian land biota

NASA Technical Reports Server (NTRS)

Campbell, S. E.

1979-01-01

The ecology of the cyanophyte-dominated stromatolitic mat forming the ground cover over desert areas of Utah and Colorado is investigated and implications for the formation of mature Precambrian soils are discussed. The activation of the growth of the two species of filamentous cyanophyte identified and the mobility of their multiple trichromes upon wetting are observed, accompanied by the production and deposition of a sheath capable of accreting and stabilizing sand and clay particles. The formation of calcium carbonate precipitates upon the repeated wetting and drying of desert crust is noted, and it is suggested that the desert crust community may appear in fossil calcrete deposits as lithified microscopic tubes and cellular remains of algal trichromes. The invasion of dry land by both marine and freshwater algae on the model of the desert crust is proposed to be responsible for the accumulation, stabilization and biogenic modification of mature Precambrian soils.

The spatial distribution and temporal variation of desert riparian forests and their influencing factors in the downstream Heihe River basin, China

NASA Astrophysics Data System (ADS)

Ding, Jingyi; Zhao, Wenwu; Daryanto, Stefani; Wang, Lixin; Fan, Hao; Feng, Qiang; Wang, Yaping

2017-05-01

Desert riparian forests are the main restored vegetation community in Heihe River basin. They provide critical habitats and a variety of ecosystem services in this arid environment. Since desert riparian forests are also sensitive to disturbance, examining the spatial distribution and temporal variation of these forests and their influencing factors is important to determine the limiting factors of vegetation recovery after long-term restoration. In this study, field experiment and remote sensing data were used to determine the spatial distribution and temporal variation of desert riparian forests and their relationship with the environmental factors. We classified five types of vegetation communities at different distances from the river channel. Community coverage and diversity formed a bimodal pattern, peaking at the distances of 1000 and 3000 m from the river channel. In general, the temporal normalized difference vegetation index (NDVI) trend from 2000 to 2014 was positive at different distances from the river channel, except for the region closest to the river bank (i.e. within 500 m from the river channel), which had been undergoing degradation since 2011. The spatial distribution of desert riparian forests was mainly influenced by the spatial heterogeneity of soil properties (e.g. soil moisture, bulk density and soil particle composition). Meanwhile, while the temporal variation of vegetation was affected by both the spatial heterogeneity of soil properties (e.g. soil moisture and soil particle composition) and to a lesser extent, the temporal variation of water availability (e.g. annual average and variability of groundwater, soil moisture and runoff). Since surface (0-30 cm) and deep (100-200 cm) soil moisture, bulk density and the annual average of soil moisture at 100 cm obtained from the remote sensing data were regarded as major determining factors of community distribution and temporal variation, conservation measures that protect the soil structure and prevent soil moisture depletion (e.g. artificial soil cover and water conveyance channels) were suggested to better protect desert riparian forests under climate change and intensive human disturbance.

High bacterial diversity of biological soil crusts in water tracks over permafrost in the high arctic polar desert.

PubMed

Steven, Blaire; Lionard, Marie; Kuske, Cheryl R; Vincent, Warwick F

2013-01-01

In this study we report the bacterial diversity of biological soil crusts (biocrusts) inhabiting polar desert soils at the northern land limit of the Arctic polar region (83° 05 N). Employing pyrosequencing of bacterial 16S rRNA genes this study demonstrated that these biocrusts harbor diverse bacterial communities, often as diverse as temperate latitude communities. The effect of wetting pulses on the composition of communities was also determined by collecting samples from soils outside and inside of permafrost water tracks, hill slope flow paths that drain permafrost-affected soils. The intermittent flow regime in the water tracks was correlated with altered relative abundance of phylum level taxonomic bins in the bacterial communities, but the alterations varied between individual sampling sites. Bacteria related to the Cyanobacteria and Acidobacteria demonstrated shifts in relative abundance based on their location either inside or outside of the water tracks. Among cyanobacterial sequences, the proportion of sequences belonging to the family Oscillatoriales consistently increased in relative abundance in the samples from inside the water tracks compared to those outside. Acidobacteria showed responses to wetting pulses in the water tracks, increasing in abundance at one site and decreasing at the other two sites. Subdivision 4 acidobacterial sequences tended to follow the trends in the total Acidobacteria relative abundance, suggesting these organisms were largely responsible for the changes observed in the Acidobacteria. Taken together, these data suggest that the bacterial communities of these high latitude polar biocrusts are diverse but do not show a consensus response to intermittent flow in water tracks over high Arctic permafrost.

Fungal endophytes in aboveground tissues of desert plants: infrequent in culture, but highly diverse and distinctive symbionts.

PubMed

Massimo, Nicholas C; Nandi Devan, M M; Arendt, Kayla R; Wilch, Margaret H; Riddle, Jakob M; Furr, Susan H; Steen, Cole; U'Ren, Jana M; Sandberg, Dustin C; Arnold, A Elizabeth

2015-07-01

In hot deserts, plants cope with aridity, high temperatures, and nutrient-poor soils with morphological and biochemical adaptations that encompass intimate microbial symbioses. Whereas the root microbiomes of arid-land plants have received increasing attention, factors influencing assemblages of symbionts in aboveground tissues have not been evaluated for many woody plants that flourish in desert environments. We evaluated the diversity, host affiliations, and distributions of endophytic fungi associated with photosynthetic tissues of desert trees and shrubs, focusing on nonsucculent woody plants in the species-rich Sonoran Desert. To inform our strength of inference, we evaluated the effects of two different nutrient media, incubation temperatures, and collection seasons on the apparent structure of endophyte assemblages. Analysis of >22,000 tissue segments revealed that endophytes were isolated four times more frequently from photosynthetic stems than leaves. Isolation frequency was lower than expected given the latitude of the study region and varied among species a function of sampling site and abiotic factors. However, endophytes were very species-rich and phylogenetically diverse, consistent with less arid sites of a similar latitudinal position. Community composition differed among host species, but not as a function of tissue type, sampling site, sampling month, or exposure. Estimates of abundance, diversity, and composition were not influenced by isolation medium or incubation temperature. Phylogenetic analyses of the most commonly isolated genus (Preussia) revealed multiple evolutionary origins of desert-plant endophytism and little phylogenetic structure with regard to seasonality, tissue preference, or optimal temperatures and nutrients for growth in vitro. Together, these results provide insight into endophytic symbioses in desert-plant communities and can be used to optimize strategies for capturing endophyte biodiversity at regional scales.

Fungal endophytes in above-ground tissues of desert plants: infrequent in culture, but highly diverse and distinctive symbionts

PubMed Central

Massimo, Nicholas C.; Nandi Devan, MM; Arendt, Kayla R.; Wilch, Margaret H.; Riddle, Jakob M.; Furr, Susan H.; Steen, Cole; U'Ren, Jana M.; Sandberg, Dustin C.; Arnold, A. Elizabeth

2015-01-01

In hot deserts, plants cope with aridity, high temperatures, and nutrient-poor soils with morphological and biochemical adaptations that encompass intimate microbial symbioses. Whereas the root microbiomes of arid-land plants have received increasing attention, factors influencing assemblages of symbionts in above-ground tissues have not been evaluated for many woody plants that flourish in desert environments. We evaluated the diversity, host affiliations, and distributions of endophytic fungi associated with photosynthetic tissues of desert trees and shrubs, focusing on non-succulent woody plants in the species-rich Sonoran Desert. To inform our strength of inference, we evaluated the effects of two different nutrient media, incubation temperatures, and collection seasons on the apparent structure of endophyte assemblages. Analysis of >22,000 tissue segments revealed that endophytes were isolated four times more frequently from photosynthetic stems than leaves. Isolation frequency was lower than expected given the latitude of the study region, and varied among species a function of sampling site and abiotic factors. However, endophytes were very species-rich and phylogenetically diverse, consistent with less-arid sites of a similar latitudinal position. Community composition differed among host species, but not as a function of tissue type, sampling site, sampling month, or exposure. Estimates of abundance, diversity and composition were not influenced by isolation medium or incubation temperature. Phylogenetic analyses of the most commonly isolated genus (Preussia) revealed multiple evolutionary origins of desert-plant endophytism and little phylogenetic structure with regard to seasonality, tissue preference, or optimal temperatures and nutrients for growth in vitro. Together, these results provide insight into endophytic symbioses in desert plant communities, and can be used to optimize strategies for capturing endophyte biodiversity at regional scales. PMID:25645243

Soil Water Adsorption and Evaporation During the Dry Season in an Arid Zone

NASA Astrophysics Data System (ADS)

Agam, N.; Berliner, P. R.

2004-12-01

The purpose of this study was to describe the daily pattern of changes in water content in the upper soil layers of a bare loess soil in the Negev desert throughout the dry season and to assess the corresponding relative magnitude of latent heat flux density. The measurements were carried out in the Northern Negev, Israel, over a bare loess soil, during nine 24-h field campaigns throughout the dry season of 2002. In addition to a micrometeorological station that was set up in the research site, an improved micro-lysimeter was installed. During each campaign, the 100-mm topsoil was sampled hourly, and water content at ten mm increments was obtained. A clear discernible daily cycle of water content in the upper soil layers was observed due to direct adsorption of water vapor by the soil and consequent evaporation. Although the water content of the uppermost soil is significantly lower than the wilting point, for which most of the commonly used meteorological models would assume no latent heat flux, the latter was ˜20% of the net-radiation during the night and 10-15% during the day. It is, therefore, concluded that latent heat flux plays a major role in the dissipation of the net radiation during the dry season in the Negev desert.

Playa Soil Moisture and Evaporation Dynamics During the MATERHORN Field Program

NASA Astrophysics Data System (ADS)

Hang, Chaoxun; Nadeau, Daniel F.; Jensen, Derek D.; Hoch, Sebastian W.; Pardyjak, Eric R.

2016-06-01

We present an analysis of field data collected over a desert playa in western Utah, USA in May 2013, the most synoptically active month of the year, as part of the Mountain Terrain Atmospheric Modeling and Observations (MATERHORN) program. The results show that decreasing surface albedo, decreasing Bowen ratio and increasing net radiation with increasing soil moisture sustained a powerful positive feedback mechanism promoting large evaporation rates immediately following rain events. Additionally, it was found that, while nocturnal evaporation was negligible during dry periods, it was quite significant (up to 30 % of the daily cumulative flux) during nights following rain events. Our results further show that the highest spatial variability in surface soil moisture is found under dry conditions. Finally, we report strong spatial heterogeneities in evaporation rates following a rain event. The cumulative evaporation for the different sampling sites over a five-day period varied from ≈ 0.1 to ≈ 6.6 mm. Overall, this study allows us to better understand the mechanisms underlying soil moisture dynamics of desert playas as well as evaporation following occasional rain events.

NNSS Soils Monitoring: Plutonium Valley (CAU 366) FY2013 and FY2014

DOE Office of Scientific and Technical Information (OSTI.GOV)

Miller, Julianne J.; Nikolich, George; Mizell, Steve

The Desert Research Institute (DRI) is conducting a field assessment of the potential for contaminated soil transport from the Plutonium Valley Contamination Area (CA) as a result of wind transport and storm runoff in support of Nevada Nuclear Security Administration (NNSA) efforts to complete regulatory closure of the contamination areas. The DRI work is intended to confirm the likely mechanism(s) of transport and determine the meteorological conditions that might cause movement of contaminated soils. Emphasis is given to collecting sediment transported by channelized storm runoff at the Plutonium Valley investigation sites. These data will inform closure plans that are beingmore » developed, which will facilitate appropriate closure design and postclosure monitoring. Desert Research Institute installed two meteorological monitoring stations south (station number 1) and north (station number 2) of the Plutonium Valley CA and a runoff sediment sampling station within the CA in 2011. Temperature, wind speed, wind direction, relative humidity, precipitation, solar radiation, barometric pressure, soil temperature, and airborne particulate concentration are collected at both meteorological stations. The maximum, minimum, and average or total (as appropriate) for each of these parameters is recorded for each 10-minute interval. The sediment sampling station includes an automatically activated ISCO sampling pump with collection bottles for suspended sediment, which is activated when sufficient flow is present in the channel, and passive traps for bedload material that is transported down the channel during runoff events. This report presents data collected from these stations during FY2013 and FY2014.« less

Taxonomic and functional profiles of soil samples from Atlantic forest and Caatinga biomes in northeastern Brazil

PubMed Central

Pacchioni, Ralfo G; Carvalho, Fabíola M; Thompson, Claudia E; Faustino, André L F; Nicolini, Fernanda; Pereira, Tatiana S; Silva, Rita C B; Cantão, Mauricio E; Gerber, Alexandra; Vasconcelos, Ana T R; Agnez-Lima, Lucymara F

2014-01-01

Although microorganisms play crucial roles in ecosystems, metagenomic analyses of soil samples are quite scarce, especially in the Southern Hemisphere. In this work, the microbial diversity of soil samples from an Atlantic Forest and Caatinga was analyzed using a metagenomic approach. Proteobacteria and Actinobacteria were the dominant phyla in both samples. Among which, a significant proportion of stress-resistant bacteria associated to organic matter degradation was found. Sequences related to metabolism of amino acids, nitrogen, and DNA and stress resistance were more frequent in Caatinga soil, while the forest sample showed the highest occurrence of hits annotated in phosphorous metabolism, defense mechanisms, and aromatic compound degradation subsystems. The principal component analysis (PCA) showed that our samples are close to the desert metagenomes in relation to taxonomy, but are more similar to rhizosphere microbiota in relation to the functional profiles. The data indicate that soil characteristics affect the taxonomic and functional distribution; these characteristics include low nutrient content, high drainage (both are sandy soils), vegetation, and exposure to stress. In both samples, a rapid turnover of organic matter with low greenhouse gas emission was suggested by the functional profiles obtained, reinforcing the importance of preserving natural areas. PMID:24706600

Desert Perennial Shrubs Shape the Microbial-Community Miscellany in Laimosphere and Phyllosphere Space.

PubMed

Martirosyan, Varsik; Unc, Adrian; Miller, Gad; Doniger, Tirza; Wachtel, Chaim; Steinberger, Yosef

2016-10-01

Microbial function, composition, and distribution play a fundamental role in ecosystem ecology. The interaction between desert plants and their associated microbes is expected to greatly affect their response to changes in this harsh environment. Using comparative analyses, we studied the impact of three desert shrubs, Atriplex halimus (A), Artemisia herba-alba (AHA), and Hammada scoparia (HS), on soil- and leaf-associated microbial communities. DNA extracted from the leaf surface and soil samples collected beneath the shrubs were used to study associated microbial diversity using a sequencing survey of variable regions of bacterial 16S rRNA and fungal ribosomal internal transcribed spacer (ITS1). We found that the composition of bacterial and fungal orders is plant-type-specific, indicating that each plant type provides a suitable and unique microenvironment. The different adaptive ecophysiological properties of the three plant species and the differential effect on their associated microbial composition point to the role of adaptation in the shaping of microbial diversity. Overall, our findings suggest a link between plant ecophysiological adaptation as a "temporary host" and the biotic-community parameters in extreme xeric environments.

Influence of shrubs on soil chemical properties in Alxa desert steppe, China

Treesearch

Hua Fu; Shifang Pei; Yaming Chen; Changgui Wan

2007-01-01

Alxa desert steppe is one of severely the degraded rangelands in the Northwest China. Shrubs, as the dominant life form in the desert steppe, play an important role in protecting this region from further desertification. Chemical properties of three soil layers (0 to 10, 10 to 20 and 20 to 30 cm) at three locations (the clump center [A], in the periphery of shrub...

Impact of biological soil crusts and desert plants on soil microfaunal community composition

USGS Publications Warehouse

Darby, B.J.; Neher, D.A.; Belnap, J.

2010-01-01

Carbon and nitrogen are supplied by a variety of sources in the desert food web; both vascular and non-vascular plants and cyanobacteria supply carbon, and cyanobacteria and plant-associated rhizosphere bacteria are sources of biological nitrogen fixation. The objective of this study was to compare the relative influence of vascular plants and biological soil crusts on desert soil nematode and protozoan abundance and community composition. In the first experiment, biological soil crusts were removed by physical trampling. Treatments with crust removed had fewer nematodes and a greater relative ratio of bacterivores to microphytophages than treatments with intact crust. However, protozoa composition was similar with or without the presence of crusts. In a second experiment, nematode community composition was characterized along a spatial gradient away from stems of grasses or shrubs. Although nematodes generally occurred in increasing abundance nearer to plant stems, some genera (such as the enrichment-type Panagrolaimus) increased disproportionately more than others (such as the stress-tolerant Acromoldavicus). We propose that the impact of biological soil crusts and desert plants on soil microfauna, as reflected in the community composition of microbivorous nematodes, is a combination of carbon input, microclimate amelioration, and altered soil hydrology. ?? Springer Science + Business Media B.V. 2009.

Plant-based plume-scale mapping of tritium contamination in desert soils

USGS Publications Warehouse

Andraski, Brian J.; Stonestrom, David A.; Michel, R.L.; Halford, K.J.; Radyk, J.C.

2005-01-01

Plant-based techniques were tested for field-scale evaluation of tritium contamination adjacent to a low-level radioactive waste (LLRW) facility in the Amargosa Desert, Nevada. Objectives were to (i) characterize and map the spatial variability of tritium in plant water, (ii) develop empirical relations to predict and map subsurface contamination from plant-water concentrations, and (iii) gain insight into tritium migration pathways and processes. Plant sampling [creosote bush, Larrea tridentata (Sessé & Moc. ex DC.) Coville] required one-fifth the time of soil water vapor sampling. Plant concentrations were spatially correlated to a separation distance of 380 m; measurement uncertainty accounted for <0.1% of the total variability in the data. Regression equations based on plant tritium explained 96 and 90% of the variation in root-zone and sub-root-zone soil water vapor concentrations, respectively. The equations were combined with kriged plant-water concentrations to map subsurface contamination. Mapping showed preferential lateral movement of tritium through a dry, coarse-textured layer beneath the root zone, with concurrent upward movement through the root zone. Analysis of subsurface fluxes along a transect perpendicular to the LLRW facility showed that upward diffusive-vapor transport dominates other transport modes beneath native vegetation. Downward advective-liquid transport dominates at one endpoint of the transect, beneath a devegetated road immediately adjacent to the facility. To our knowledge, this study is the first to document large-scale subsurface vapor-phase tritium migration from a LLRW facility. Plant-based methods provide a noninvasive, cost-effective approach to mapping subsurface tritium migration in desert areas.

Spectral identification and quantification of salts in the Atacama Desert

NASA Astrophysics Data System (ADS)

Harris, J. K.; Cousins, C. R.; Claire, M. W.

2016-10-01

Salt minerals are an important natural resource. The ability to quickly and remotely identify and quantify salt deposits and salt contaminated soils and sands is therefore a priority goal for the various industries and agencies that utilise salts. The advent of global hyperspectral imagery from instruments such as Hyperion on NASA's Earth-Observing 1 satellite has opened up a new source of data that can potentially be used for just this task. This study aims to assess the ability of Visible and Near Infrared (VNIR) spectroscopy to identify and quantify salt minerals through the use of spectral mixture analysis. The surface and near-surface soils of the Atacama Desert in Chile contain a variety of well-studied salts, which together with low cloud coverage, and high aridity, makes this region an ideal testbed for this technique. Two forms of spectral data ranging 0.35 - 2.5 μm were collected: laboratory spectra acquired using an ASD FieldSpec Pro instrument on samples from four locations in the Atacama desert known to have surface concentrations of sulfates, nitrates, chlorides and perchlorates; and images from the EO-1 satellite's Hyperion instrument taken over the same four locations. Mineral identifications and abundances were confirmed using quantitative XRD of the physical samples. Spectral endmembers were extracted from within the laboratory and Hyperion spectral datasets and together with additional spectral library endmembers fed into a linear mixture model. The resulting identification and abundances from both dataset types were verified against the sample XRD values. Issues of spectral scale, SNR and how different mineral spectra interact are considered, and the utility of VNIR spectroscopy and Hyperion in particular for mapping specific salt concentrations in desert environments is established. Overall, SMA was successful at estimating abundances of sulfate minerals, particularly calcium sulfate, from both hyperspectral image and laboratory sample spectra, while abundance estimation of other salt phase spectral end-members was achieved with a higher degree of error.

Effects of Desert Dust on Nutrient Cycling in the San Juan Mountains, Colorado

NASA Astrophysics Data System (ADS)

Neff, J. C.; Farmer, L.; Painter, T. H.; Landry, C.; Reynolds, R.

2005-12-01

The San Juan Mountains of southwestern Colorado lie downwind from several major deserts and experience several dust-deposition events each year. These events appear related to storms that erode soils in the deserts of the western US and then deposit atmospheric dust from these soils during or after snowfall during large late winter and spring deposition events. To evaluate the biogeochemical implications of eolian deposition, we collected dust from distinct layers deposited into the seasonal snowpack. We also sampled soils and lake sediments in a high-elevation catchment in the San Juan Mountains. Atmospheric dust was characterized by measurements of chemical composition, Sr isotopic content and analysis of the organic and inorganic constituents of deposited eolian material. The origins of snowpack dust in the San Juans were analyzed using atmospheric tracer transport modeling. These analyses suggest that many dust events originate in southern Utah and northern Arizona, areas that have undergone substantial land use change through the 20th century and that experience severe wind erosion of soils during periodic severe droughts. Analyses of 87Sr/86Sr isotope ratios dust, soils, bedrock, and sediments suggest that eolian dust may compose as much as 90% of the near-surface soil (top 5 cm). In alpine lake sediments, Sr isotopes suggest a relatively recent (20th century) increase in the fraction of sediments derived from dust (relative to bedrock) and a similarly large contribution of dust to surface sediments. Sediment chemistry in two small alpine tarns show changes in Ca, Mg, Al, and Fe concentrations that imply increasing dust (vs. bedrock) contributions to lake sediments over the past 100-200 years. Increasing loading of Ca, Mg and P to alpine basins may have implications for alpine and sub-alpine biogeochemical cycling including water quality and plant nutrient use.

"Modeled and measured carbon cycling in Mojave Desert soils: toward present and projected greenhouse gas budgets for arid regions

NASA Astrophysics Data System (ADS)

Maurer, G. E.; Amundson, R.; Lammers, L. N.; Mills, J.; Oerter, E.

2017-12-01

Drylands comprise roughly 35% of the Earth's surface, store globally significant amounts of carbon, and cycle this carbon at rates that vary greatly from year to year. Consequently, drylands are thought to contribute to inter-annual changes in the global atmospheric CO2 budget. Sparse measurements and limited process-based modeling have made quantifying dryland carbon cycling at regional or larger scales a major challenge. We parameterized and ran the DayCent model, an ecosystem model that simulates soil C and N cycling and greenhouse gas (GHG) fluxes, using long-term regional climate, soil, and vegetation data for the Mojave Desert region (southwest USA). DayCent predicted somewhat greater soil organic C than was observed in a database of 186 measured Mojave soil survey samples, but successfully recreated climate-driven patterns in soil carbon storage across the landscape. Modeled soil organic carbon storage increased by between 4.1 and 5.1 kg/m2 per km of elevation gained, while Mojave soil survey data indicated an increase of 4.6 kg/m2. Model predictions of soil CO2 flux were validated and calibrated against field observations from ten Mojave soil gas profile studies sampled intermittently between 1986 and the present. DayCent had a tendency to overestimate soil respiration measured at some sites by up to 600% compared to profile measurements. Modeled soil CO2 fluxes increased by between 1280 and 4141 kg/ha/yr per km of elevation gained.This elevational pattern did not match well with landscape-level changes in observed soil profile CO2 flux data, indicating further calibration of DayCent will be needed to produce regional estimates of GHG flux. This ongoing synthesis of modeling and measurements extends the current knowledge of the Mojave's contribution to the global GHG budget and will provide a basis from which to project future emissions from the Mojave and other dryland regions.

Growth responses of five desert plants as influenced by biological soil crusts from a temperate desert, China

USGS Publications Warehouse

Zhang, Yuanming; Belnap, Jayne

2015-01-01

In almost all dryland systems, biological soil crusts (biocrusts) coexist alongside herbaceous and woody vegetation, creating landscape mosaics of vegetated and biocrusted patches. Results from past studies on the interaction between biocrusts and vascular plants have been contradictory. In the Gurbantunggut desert, a large temperate desert in northwestern China, well-developed lichen-dominated crusts dominate the areas at the base and between the sand dunes. We examined the influence of these lichen-dominated biocrusts on the germination, growth, biomass accumulation, and elemental content of five common plants in this desert: two shrubs (Haloxylon persicum, Ephedra distachya) and three herbaceous plants (Ceratocarpus arenarius, Malcolmia africana and Lappula semiglabra) under greenhouse conditions. The influence of biocrusts on seed germination was species-specific. Biocrusts did not affect percent germination in plants with smooth seeds, but inhibited germination of seeds with appendages that reduced or eliminated contact with the soil surface or prevented seeds from slipping into soil cracks. Once seeds had germinated, biocrusts had different influences on growth of shrub and herbaceous plants. The presence of biocrusts increased concentrations of nitrogen but did not affect phosphorus or potassium in tissue of all tested species, while the uptake of the other tested nutrients was species-specific. Our study showed that biocrusts can serve as a biological filter during seed germination and also can influence growth and elemental uptake. Therefore, they may be an important trigger for determining desert plant diversity and community composition in deserts.

Influence of Disturbance on Soil Respiration in Biologically Crusted Soil during the Dry Season

PubMed Central

Feng, Wei; Zhang, Yu-qing; Wu, Bin; Zha, Tian-shan; Jia, Xin; Qin, Shu-gao; Shao, Chen-xi; Liu, Jia-bin; Lai, Zong-rui; Fa, Ke-yu

2013-01-01

Soil respiration (Rs) is a major pathway for carbon cycling and is a complex process involving abiotic and biotic factors. Biological soil crusts (BSCs) are a key biotic component of desert ecosystems worldwide. In desert ecosystems, soils are protected from surface disturbance by BSCs, but it is unknown whether Rs is affected by disturbance of this crust layer. We measured Rs in three types of disturbed and undisturbed crusted soils (algae, lichen, and moss), as well as bare land from April to August, 2010, in Mu Us desert, northwest China. Rs was similar among undisturbed soils but increased significantly in disturbed moss and algae crusted soils. The variation of Rs in undisturbed and disturbed soil was related to soil bulk density. Disturbance also led to changes in soil organic carbon and fine particles contents, including declines of 60–70% in surface soil C and N, relative to predisturbance values. Once BSCs were disturbed, Q 10 increased. Our findings indicate that a loss of BSCs cover will lead to greater soil C loss through respiration. Given these results, understanding the disturbance sensitivity impact on Rs could be helpful to modify soil management practices which promote carbon sequestration. PMID:24453845

Enhancing and restoring habitat for the desert tortoise

USGS Publications Warehouse

Abella, Scott R.; Berry, Kristin H.

2016-01-01

Habitat has changed unfavorably during the past 150 y for the desert tortoise Gopherus agassizii, a federally threatened species with declining populations in the Mojave Desert and western Sonoran Desert. To support recovery efforts, we synthesized published information on relationships of desert tortoises with three habitat features (cover sites, forage, and soil) and candidate management practices for improving these features for tortoises. In addition to their role in soil health and facilitating recruitment of annual forage plants, shrubs are used by desert tortoises for cover and as sites for burrows. Outplanting greenhouse-grown seedlings, protected from herbivory, has successfully restored (>50% survival) a variety of shrubs on disturbed desert soils. Additionally, salvaging and reapplying topsoil using effective techniques is among the more ecologically beneficial ways to initiate plant recovery after severe disturbance. Through differences in biochemical composition and digestibility, some plant species provide better-quality forage than others. Desert tortoises selectively forage on particular annual and herbaceous perennial species (e.g., legumes), and forage selection shifts during the year as different plants grow or mature. Nonnative grasses provide low-quality forage and contribute fuel to spreading wildfires, which damage or kill shrubs that tortoises use for cover. Maintaining a diverse “menu” of native annual forbs and decreasing nonnative grasses are priorities for restoring most desert tortoise habitats. Reducing herbivory by nonnative animals, carefully timing herbicide applications, and strategically augmenting annual forage plants via seeding show promise for improving tortoise forage quality. Roads, another disturbance, negatively affect habitat in numerous ways (e.g., compacting soil, altering hydrology). Techniques such as recontouring road berms to reestablish drainage patterns, vertical mulching (“planting” dead plant material), and creating barriers to prevent trespasses can assist natural recovery on decommissioned backcountry roads. Most habitat enhancement efforts to date have focused on only one factor at a time (e.g., providing fencing) and have not included proactive restoration activities (e.g., planting native species on disturbed soils). A research and management priority in recovering desert tortoise habitats is implementing an integrated set of restorative habitat enhancements (e.g., reducing nonnative plants, improving forage quality, augmenting native perennial plants, and ameliorating altered hydrology) and monitoring short- and long-term indicators of habitat condition and the responses of desert tortoises to habitat restoration.

[Rainfall and soil moisture redistribution induced by xerophytic shrubs in an arid desert ecosystem].

PubMed

Wang, Zheng Ning; Wang, Xin Ping; Liu, Bo

2016-03-01

Rainfall partitioning by desert shrub canopy modifies the redistribution of incident rainfall under the canopy, and may affect the distribution pattern of soil moisture around the plant. This study examined the distribution of rainfall and the response of soil moisture beneath the canopy of two dominant desert shrubs, Caragana korshinskii and Artemisia ordosica, in the revegetation area at the southeastern edge of the Tengger Desert. The results showed that throughfall and stemflow ave-ragely occupied 74.4%, 11.3% and 61.8%, 5.5% of the gross precipitation for C. korshinskii and A. ordosica, respectively. The mean coefficients of variation (CV) of throughfall were 0.25 and 0.30, respectively. C. korshinski were more efficient than A. ordosica on stemflow generation. The depth of soil wetting front around the stem area was greater than other areas under shrub canopy for C. korshinski, and it was only significantly greater under bigger rain events for A. ordosica. The shrub canopy could cause the unevenness of soil wetting front under the canopy in consequence of rainfall redistribution induced by xerophytic shrub.

Does protection of desert tortoise habitat generate other ecological benefits in the Mojave Desert?

Treesearch

Matthew L. Brooks

2000-01-01

This paper summarizes the ecological effects of fenced habitat protection for the desert tortoise (Gopherus agassizii) at the Desert Tortoise Research Natural Area in the Mojave Desert. The following were higher inside than outside the natural area: (1) annual and perennial plant biomass, cover, diversity and dominance by natives, (2) soil seed...

Soil nematode communities are ecologically more mature beneath late- than early-successional stage biological soil crusts

USGS Publications Warehouse

Darby, B.J.; Neher, D.A.; Belnap, J.

2007-01-01

Biological soil crusts are key mediators of carbon and nitrogen inputs for arid land soils and often represent a dominant portion of the soil surface cover in arid lands. Free-living soil nematode communities reflect their environment and have been used as biological indicators of soil condition. In this study, we test the hypothesis that nematode communities are successionally more mature beneath well-developed, late-successional stage crusts than immature, early-successional stage crusts. We identified and enumerated nematodes by genus from beneath early- and late-stage crusts from both the Colorado Plateau, Utah (cool, winter rain desert) and Chihuahuan Desert, New Mexico (hot, summer rain desert) at 0-10 and 10-30 cm depths. As hypothesized, nematode abundance, richness, diversity, and successional maturity were greater beneath well-developed crusts than immature crusts. The mechanism of this aboveground-belowground link between biological soil crusts and nematode community composition is likely the increased food, habitat, nutrient inputs, moisture retention, and/or environmental stability provided by late-successional crusts. Canonical correspondence analysis of nematode genera demonstrated that nematode community composition differed greatly between geographic locations that contrast in temperature, precipitation, and soil texture. We found unique assemblages of genera among combinations of location and crust type that reveal a gap in scientific knowledge regarding empirically derived characterization of dominant nematode genera in deserts soils and their functional role in a crust-associated food web. ?? 2006 Elsevier B.V. All rights reserved.

Bioremediation of Crude Oil Contaminated Desert Soil: Effect of Biostimulation, Bioaugmentation and Bioavailability in Biopile Treatment Systems

PubMed Central

Benyahia, Farid; Embaby, Ahmed Shams

2016-01-01

This work was aimed at evaluating the relative merits of bioaugmentation, biostimulation and surfactant-enhanced bioavailability of a desert soil contaminated by crude oil through biopile treatment. The results show that the desert soil required bioaugmentation and biostimulation for bioremediation of crude oil. The bioaugmented biopile system led to a total petroleum hydrocarbon (TPH) reduction of 77% over 156 days while the system with polyoxyethylene (20) sorbitan monooleate (Tween 80) gave a 56% decrease in TPH. The biostimulated system with indigenous micro-organisms gave 23% reduction in TPH. The control system gave 4% TPH reduction. The addition of Tween 80 led to a respiration rate that peaked in 48 days compared to 88 days for the bioaugmented system and respiration declined rapidly due to nitrogen depletion. The residual hydrocarbon in the biopile systems studied contained polyaromatics (PAH) in quantities that may be considered as hazardous. Nitrogen was found to be a limiting nutrient in desert soil bioremediation. PMID:26891314

Bioremediation of Crude Oil Contaminated Desert Soil: Effect of Biostimulation, Bioaugmentation and Bioavailability in Biopile Treatment Systems.

PubMed

Benyahia, Farid; Embaby, Ahmed Shams

2016-02-15

This work was aimed at evaluating the relative merits of bioaugmentation, biostimulation and surfactant-enhanced bioavailability of a desert soil contaminated by crude oil through biopile treatment. The results show that the desert soil required bioaugmentation and biostimulation for bioremediation of crude oil. The bioaugmented biopile system led to a total petroleum hydrocarbon (TPH) reduction of 77% over 156 days while the system with polyoxyethylene (20) sorbitan monooleate (Tween 80) gave a 56% decrease in TPH. The biostimulated system with indigenous micro-organisms gave 23% reduction in TPH. The control system gave 4% TPH reduction. The addition of Tween 80 led to a respiration rate that peaked in 48 days compared to 88 days for the bioaugmented system and respiration declined rapidly due to nitrogen depletion. The residual hydrocarbon in the biopile systems studied contained polyaromatics (PAH) in quantities that may be considered as hazardous. Nitrogen was found to be a limiting nutrient in desert soil bioremediation.

Few apparent short-term effects of elevated soil temperature and increased frequency of summer precipitation on the abundance and taxonomic diversity of desert soil micro- and meso-fauna

USGS Publications Warehouse

Darby, B.J.; Neher, D.A.; Housman, D.C.; Belnap, J.

2011-01-01

Frequent hydration and drying of soils in arid systems can accelerate desert carbon and nitrogen mobilization due to respiration, microbial death, and release of intracellular solutes. Because desert microinvertebrates can mediate nutrient cycling, and the autotrophic components of crusts are known to be sensitive to rapid desiccation due to elevated temperatures after wetting events, we studied whether altered soil temperature and frequency of summer precipitation can also affect the composition of food web consumer functional groups. We conducted a two-year field study with experimentally-elevated temperature and frequency of summer precipitation in the Colorado Plateau desert, measuring the change in abundance of nematodes, protozoans, and microarthropods. We hypothesized that microfauna would be more adversely affected by the combination of elevated temperature and frequency of summer precipitation than either effect alone, as found previously for phototrophic crust biota. Microfauna experienced normal seasonal fluctuations in abundance, but the effect of elevated temperature and frequency of summer precipitation was statistically non-significant for most microfaunal groups, except amoebae. The seasonal increase in abundance of amoebae was reduced with combined elevated temperature and increased frequency of summer precipitation compared to either treatment alone, but comparable with control (untreated) plots. Based on our findings, we suggest that desert soil microfauna are relatively more tolerant to increases in ambient temperature and frequency of summer precipitation than the autotrophic components of biological soil crust at the surface.

High Bacterial Diversity of Biological Soil Crusts in Water Tracks over Permafrost in the High Arctic Polar Desert

DOE PAGES

Steven, Blaire; Lionard, Marie; Kuske, Cheryl R.; ...

2013-08-13

In this paper we report the bacterial diversity of biological soil crusts (biocrusts) inhabiting polar desert soils at the northern land limit of the Arctic polar region (83° 05 N). Employing pyrosequencing of bacterial 16S rRNA genes this study demonstrated that these biocrusts harbor diverse bacterial communities, often as diverse as temperate latitude communities. The effect of wetting pulses on the composition of communities was also determined by collecting samples from soils outside and inside of permafrost water tracks, hill slope flow paths that drain permafrost-affected soils. The intermittent flow regime in the water tracks was correlated with altered relativemore » abundance of phylum level taxonomic bins in the bacterial communities, but the alterations varied between individual sampling sites. Bacteria related to the Cyanobacteria and Acidobacteria demonstrated shifts in relative abundance based on their location either inside or outside of the water tracks. Among cyanobacterial sequences, the proportion of sequences belonging to the family Oscillatoriales consistently increased in relative abundance in the samples from inside the water tracks compared to those outside. Acidobacteria showed responses to wetting pulses in the water tracks, increasing in abundance at one site and decreasing at the other two sites. Subdivision 4 acidobacterial sequences tended to follow the trends in the total Acidobacteria relative abundance, suggesting these organisms were largely responsible for the changes observed in the Acidobacteria. Finally, taken together, these data suggest that the bacterial communities of these high latitude polar biocrusts are diverse but do not show a consensus response to intermittent flow in water tracks over high Arctic permafrost.« less

High Bacterial Diversity of Biological Soil Crusts in Water Tracks over Permafrost in the High Arctic Polar Desert

PubMed Central

Steven, Blaire; Lionard, Marie; Kuske, Cheryl R.; Vincent, Warwick F.

2013-01-01

In this study we report the bacterial diversity of biological soil crusts (biocrusts) inhabiting polar desert soils at the northern land limit of the Arctic polar region (83° 05 N). Employing pyrosequencing of bacterial 16S rRNA genes this study demonstrated that these biocrusts harbor diverse bacterial communities, often as diverse as temperate latitude communities. The effect of wetting pulses on the composition of communities was also determined by collecting samples from soils outside and inside of permafrost water tracks, hill slope flow paths that drain permafrost-affected soils. The intermittent flow regime in the water tracks was correlated with altered relative abundance of phylum level taxonomic bins in the bacterial communities, but the alterations varied between individual sampling sites. Bacteria related to the Cyanobacteria and Acidobacteria demonstrated shifts in relative abundance based on their location either inside or outside of the water tracks. Among cyanobacterial sequences, the proportion of sequences belonging to the family Oscillatoriales consistently increased in relative abundance in the samples from inside the water tracks compared to those outside. Acidobacteria showed responses to wetting pulses in the water tracks, increasing in abundance at one site and decreasing at the other two sites. Subdivision 4 acidobacterial sequences tended to follow the trends in the total Acidobacteria relative abundance, suggesting these organisms were largely responsible for the changes observed in the Acidobacteria. Taken together, these data suggest that the bacterial communities of these high latitude polar biocrusts are diverse but do not show a consensus response to intermittent flow in water tracks over high Arctic permafrost. PMID:23967218

Microbial ecology and biogeochemistry of continental Antarctic soils.

PubMed

Cowan, Don A; Makhalanyane, Thulani P; Dennis, Paul G; Hopkins, David W

2014-01-01

The Antarctica Dry Valleys are regarded as the coldest hyperarid desert system on Earth. While a wide variety of environmental stressors including very low minimum temperatures, frequent freeze-thaw cycles and low water availability impose severe limitations to life, suitable niches for abundant microbial colonization exist. Antarctic desert soils contain much higher levels of microbial diversity than previously thought. Edaphic niches, including cryptic and refuge habitats, microbial mats and permafrost soils all harbor microbial communities which drive key biogeochemical cycling processes. For example, lithobionts (hypoliths and endoliths) possess a genetic capacity for nitrogen and carbon cycling, polymer degradation, and other system processes. Nitrogen fixation rates of hypoliths, as assessed through acetylene reduction assays, suggest that these communities are a significant input source for nitrogen into these oligotrophic soils. Here we review aspects of microbial diversity in Antarctic soils with an emphasis on functionality and capacity. We assess current knowledge regarding adaptations to Antarctic soil environments and highlight the current threats to Antarctic desert soil communities.

Ecosystem responses to warming and watering in typical and desert steppes.

PubMed

Xu, Zhenzhu; Hou, Yanhui; Zhang, Lihua; Liu, Tao; Zhou, Guangsheng

2016-10-10

Global warming is projected to continue, leading to intense fluctuations in precipitation and heat waves and thereby affecting the productivity and the relevant biological processes of grassland ecosystems. Here, we determined the functional responses to warming and altered precipitation in both typical and desert steppes. The results showed that watering markedly increased the aboveground net primary productivity (ANPP) in a typical steppe during a drier year and in a desert steppe over two years, whereas warming manipulation had no significant effect. The soil microbial biomass carbon (MBC) and the soil respiration (SR) were increased by watering in both steppes, but the SR was significantly decreased by warming in the desert steppe only. The inorganic nitrogen components varied irregularly, with generally lower levels in the desert steppe. The belowground traits of soil total organic carbon (TOC) and the MBC were more closely associated with the ANPP in the desert than in the typical steppes. The results showed that the desert steppe with lower productivity may respond strongly to precipitation changes, particularly with warming, highlighting the positive effect of adding water with warming. Our study implies that the habitat- and year-specific responses to warming and watering should be considered when predicting an ecosystem's functional responses under climate change scenarios.

Ecosystem responses to warming and watering in typical and desert steppes

PubMed Central

Xu, Zhenzhu; Hou, Yanhui; Zhang, Lihua; Liu, Tao; Zhou, Guangsheng

2016-01-01

Global warming is projected to continue, leading to intense fluctuations in precipitation and heat waves and thereby affecting the productivity and the relevant biological processes of grassland ecosystems. Here, we determined the functional responses to warming and altered precipitation in both typical and desert steppes. The results showed that watering markedly increased the aboveground net primary productivity (ANPP) in a typical steppe during a drier year and in a desert steppe over two years, whereas warming manipulation had no significant effect. The soil microbial biomass carbon (MBC) and the soil respiration (SR) were increased by watering in both steppes, but the SR was significantly decreased by warming in the desert steppe only. The inorganic nitrogen components varied irregularly, with generally lower levels in the desert steppe. The belowground traits of soil total organic carbon (TOC) and the MBC were more closely associated with the ANPP in the desert than in the typical steppes. The results showed that the desert steppe with lower productivity may respond strongly to precipitation changes, particularly with warming, highlighting the positive effect of adding water with warming. Our study implies that the habitat- and year-specific responses to warming and watering should be considered when predicting an ecosystem’s functional responses under climate change scenarios. PMID:27721480

Ecosystem responses to warming and watering in typical and desert steppes

NASA Astrophysics Data System (ADS)

Xu, Zhenzhu; Hou, Yanhui; Zhang, Lihua; Liu, Tao; Zhou, Guangsheng

2016-10-01

Global warming is projected to continue, leading to intense fluctuations in precipitation and heat waves and thereby affecting the productivity and the relevant biological processes of grassland ecosystems. Here, we determined the functional responses to warming and altered precipitation in both typical and desert steppes. The results showed that watering markedly increased the aboveground net primary productivity (ANPP) in a typical steppe during a drier year and in a desert steppe over two years, whereas warming manipulation had no significant effect. The soil microbial biomass carbon (MBC) and the soil respiration (SR) were increased by watering in both steppes, but the SR was significantly decreased by warming in the desert steppe only. The inorganic nitrogen components varied irregularly, with generally lower levels in the desert steppe. The belowground traits of soil total organic carbon (TOC) and the MBC were more closely associated with the ANPP in the desert than in the typical steppes. The results showed that the desert steppe with lower productivity may respond strongly to precipitation changes, particularly with warming, highlighting the positive effect of adding water with warming. Our study implies that the habitat- and year-specific responses to warming and watering should be considered when predicting an ecosystem’s functional responses under climate change scenarios.

Weathering and genesis of Soils from Ellsworth Mountains, East Antarctica

NASA Astrophysics Data System (ADS)

Karoline Delpupo Souza, Katia; Schaefer, Carlos Ernesto; Michel, Roberto; Monari, Julia; Machado, Vania

2015-04-01

Knowledge on Antarctic soils from the Ellsworth Mountains (EM) are patchy comparatively with Dry Valleys soils from the Transantartic Mountains, and could help understand the genesis of cryogenic soils under extreme dry, cold desert conditions. The EM are a slightly arcuate 350-km-long north-northwest-trending mountain chain is bordered on the west by the polar plateau of West Antarctica and on the east by Ronne Ice Shelf. The range is as much as 90 km wide and constitutes one of the largest areas of exposed bedrock in West Antarctica. The stratigraphic succession in the EM includes strata from Cambriam to Permian in age. The objective of this study is to analyze the properties of soils from EM in order to identify the main factors and processes involved in soil formation under cold desert conditions in Antarctica. The sampling design aimed to represent the different geological substrates (marble-clast conglomerate, graywacke, argillite, conglomerate, black shale, marble and quartzite) as well as altitudinal levels and landforms within the same substrate. We characterized soils from EM regarding their morphological, physics and chemical properties. Soil samples were air dried and passed through 2 mm sieves. After removal of water soluble salts, the samples were submitted to chemical and physical analyses such as: pH in water, potential acidity (H + Al), exchangeable bases, total organic carbon, electric conductivity, soil texture and color. The soils classify, for the most part, in weathering stages 1 to 2. Only in the upper parts of ridges were there traces of soils at weathering stage 3. This indicates that much of the present icefree topography has been overridden by ice within the last few hundred thousand years. Cryoturbation is a widespread phenomenon in this area resulting in intense cryoclastic weathering and patterned ground, forming sorted circles, stripes and gelifluxion lobes. The soil show low horizontation, discrete patches of salt on the surface, and salt crusts beneath the rock fragments. Despite of the low weathering stage of the soil, they have yellowish hue and high chroma values from influence by sulfide material. Boulders on moraines show staining, pitting, spalling, and some striations. All soil are alkaline in reaction, with pHs at the range between 7.5-9.2. Cryptogamic (lichens or mosses) crusts are absent, and the organic matter contents were invariably very low, ranging between 0.13 and 0.38%. Permafrost is continuous and occurs close to the surface, at between 5-15 cm down the top. The available P background is also very low (< 5.3 mg/kg), exchangeable K and Na levels are surprisingly low for Polar Desert soils. Soils are all skelletic, with a predominance of coarse materials. CEC is medium to high, and Ca-dominated, as a result of a strong limestone influence in the moraine parent materials. The main salts present are Ca and Na-sulphate forms, and less cloride forms, and clay sized materials are dominated by salts in all soils, especially below 5 cm depth.

Abiotic gas formation drives nitrogen loss from a desert ecosystem.

PubMed

McCalley, Carmody K; Sparks, Jed P

2009-11-06

In arid environments such as deserts, nitrogen is often the most limiting nutrient for biological activity. The majority of the ecosystem nitrogen flux is typically thought to be driven by production and loss of reactive nitrogen species by microorganisms in the soil. We found that high soil-surface temperatures (greater than 50 degrees C), driven by solar radiation, are the primary cause of nitrogen loss in Mojave Desert soils. This abiotic pathway not only enables the balancing of arid ecosystem nitrogen budgets, but also changes our view of global nitrogen cycling and the predicted impact of climate change and increased temperatures on nitrogen bioavailability.

Ice Nucleation Activity of Various Agricultural Soil Dust Aerosol Particles

NASA Astrophysics Data System (ADS)

Schiebel, Thea; Höhler, Kristina; Funk, Roger; Hill, Thomas C. J.; Levin, Ezra J. T.; Nadolny, Jens; Steinke, Isabelle; Suski, Kaitlyn J.; Ullrich, Romy; Wagner, Robert; Weber, Ines; DeMott, Paul J.; Möhler, Ottmar

2016-04-01

Recent investigations at the cloud simulation chamber AIDA (Aerosol Interactions and Dynamics in the Atmosphere) suggest that agricultural soil dust has an ice nucleation ability that is enhanced up to a factor of 10 compared to desert dust, especially at temperatures above -26 °C (Steinke et al., in preparation for submission). This enhancement might be caused by the contribution of very ice-active biological particles. In addition, soil dust aerosol particles often contain a considerably higher amount of organic matter compared to desert dust particles. To test agricultural soil dust as a source of ice nucleating particles, especially for ice formation in warm clouds, we conducted a series of laboratory measurements with different soil dust samples to extend the existing AIDA dataset. The AIDA has a volume of 84 m3 and operates under atmospherically relevant conditions over wide ranges of temperature, pressure and humidity. By controlled adiabatic expansions, the ascent of an air parcel in the troposphere can be simulated. As a supplement to the AIDA facility, we use the INKA (Ice Nucleation Instrument of the KArlsruhe Institute of Technology) continuous flow diffusion chamber based on the design by Rogers (1988) to expose the sampled aerosol particles to a continuously increasing saturation ratio by keeping the aerosol temperature constant. For our experiments, soil dust was dry dispersed into the AIDA vessel. First, fast saturation ratio scans at different temperatures were performed with INKA, sampling soil dust aerosol particles directly from the AIDA vessel. Then, we conducted the AIDA expansion experiment starting at a preset temperature. The combination of these two different methods provides a robust data set on the temperature-dependent ice activity of various agriculture soil dust aerosol particles with a special focus on relatively high temperatures. In addition, to extend the data set, we investigated the role of biological and organic matter in more detail to gain additional information on the trigger of the enhanced ice nucleation activity of soil dust. References Rogers (1988): Development of a continuous flow thermal gradient diffusion chamber for ice nucleation studies Steinke et al. (In preparation for submission): Ice nucleation activity of agricultural soil dust aerosols from Mongolia, Argentina and Germany

Recovery of severely compacted soils in the Mojave Desert, California, USA

USGS Publications Warehouse

Webb, R.H.

2002-01-01

Often as a result of large-scale military maneuvers in the past, many soils in the Mojave Desert are highly vulnerable to soil compaction, particularly when wet. Previous studies indicate that natural recovery of severely compacted desert soils is extremely slow, and some researchers have suggested that subsurface compaction may not recover. Poorly sorted soils, particularly those with a loamy sand texture, are most vulnerable to soil compaction, and these soils are the most common in alluvial fans of the Mojave Desert. Recovery of compacted soil is expected to vary as a function of precipitation amounts, wetting-and-drying cycles, freeze-thaw cycles, and bioturbation, particularly root growth. Compaction recovery, as estimated using penetration depth and bulk density, was measured at 19 sites with 32 site-time combinations, including the former World War II Army sites of Camps Ibis, Granite, Iron Mountain, Clipper, and Essex. Although compaction at these sites was caused by a wide variety of forces, ranging from human trampling to tank traffic, the data do not allow segregation of differences in recovery rates for different compaction forces. The recovery rate appears to be logarithmic, with the highest rate of change occurring in the first few decades following abandonment. Some higher-elevation sites have completely recovered from soil compaction after 70 years. Using a linear model of recovery, the full recovery time ranges from 92 to 100 years; using a logarithmic model, which asymptotically approaches full recovery, the time required for 85% recovery ranges from 105-124 years.

Taxonomic and functional profiles of soil samples from Atlantic forest and Caatinga biomes in northeastern Brazil.

PubMed

Pacchioni, Ralfo G; Carvalho, Fabíola M; Thompson, Claudia E; Faustino, André L F; Nicolini, Fernanda; Pereira, Tatiana S; Silva, Rita C B; Cantão, Mauricio E; Gerber, Alexandra; Vasconcelos, Ana T R; Agnez-Lima, Lucymara F

2014-06-01

Although microorganisms play crucial roles in ecosystems, metagenomic analyses of soil samples are quite scarce, especially in the Southern Hemisphere. In this work, the microbial diversity of soil samples from an Atlantic Forest and Caatinga was analyzed using a metagenomic approach. Proteobacteria and Actinobacteria were the dominant phyla in both samples. Among which, a significant proportion of stress-resistant bacteria associated to organic matter degradation was found. Sequences related to metabolism of amino acids, nitrogen, and DNA and stress resistance were more frequent in Caatinga soil, while the forest sample showed the highest occurrence of hits annotated in phosphorous metabolism, defense mechanisms, and aromatic compound degradation subsystems. The principal component analysis (PCA) showed that our samples are close to the desert metagenomes in relation to taxonomy, but are more similar to rhizosphere microbiota in relation to the functional profiles. The data indicate that soil characteristics affect the taxonomic and functional distribution; these characteristics include low nutrient content, high drainage (both are sandy soils), vegetation, and exposure to stress. In both samples, a rapid turnover of organic matter with low greenhouse gas emission was suggested by the functional profiles obtained, reinforcing the importance of preserving natural areas. © 2014 The Authors. MicrobiologyOpen published by John Wiley & Sons Ltd.

Variation of Desert Soil Hydraulic Properties with Pedogenic Maturity

NASA Astrophysics Data System (ADS)

Nimmo, J. R.; Perkins, K. S.; Mirus, B. B.; Schmidt, K. M.; Miller, D. M.; Stock, J. D.; Singha, K.

2006-12-01

Older alluvial desert soils exhibit greater pedogenic maturity, having more distinct desert pavements, vesicular (Av) horizons, and more pronounced stratification from processes such as illuviation and salt accumulation. These and related effects strongly influence the soil hydraulic properties. Older soils have been observed to have lower saturated hydraulic conductivity, and possibly greater capacity to retain water, but the quantitative effect of specific pedogenic features on the soil water retention or unsaturated hydraulic conductivity (K) curves is poorly known. With field infiltration/redistribution experiments on three different-aged soils developed within alluvial wash deposits in the Mojave National Preserve, we evaluated effective hydraulic properties over a scale of several m horizontally and to 1.5 m depth. We then correlated these properties with pedogenic features. The selected soils are (1) recently deposited sediments, (2) a soil of early Holocene age, and (3) a highly developed soil of late Pleistocene age. In each experiment we ponded water in a 1-m-diameter infiltration ring for 2.3 hr. For several weeks we monitored subsurface water content and matric pressure using surface electrical resistance imaging, dielectric-constant probes, heat-dissipation probes, and tensiometers. Analysis of these data using an inverse modeling technique gives the water retention and K properties needed for predictive modeling. Some properties show a consistent trend with soil age. Progressively more developed surface and near-surface features such as desert pavement and Av horizons are the likely cause of an observed consistent decline of infiltration capacity with soil age. Other properties, such as vertical flow retardation by layer contrasts, appear to have a more complicated soil-age dependence. The wash deposits display distinct depositional layering that has a retarding effect on vertical flow, an effect that may be less pronounced in the older Holocene soil, where the original depositional structure has a relatively modest influence. Anisotropy at the scale of centimeters is of major importance in the Pleistocene soil, with developed horizons that tend to hold water within about 0.5 m of the surface for a longer duration than in the two younger soils. Correlation of these and related pedogenic features with soil hydraulic properties is a first step toward the estimation of effective hydraulic properties of widely varying Mojave Desert soils, as needed for large-scale evaluation of soil moisture dynamics in relation to ecological habitat quality.

Wind erodibility of soils at Fort Irwin, California (Mojave Desert), USA, before and after trampling disturbance: Implications for land management

USGS Publications Warehouse

Belnap, J.; Phillips, S.L.; Herrick, J.E.; Johansen, J.R.

2007-01-01

Recently disturbed and 'control' (i.e. less recently disturbed) soils in the Mojave Desert were compared for their vulnerability to wind erosion, using a wind tunnel, before and after being experimentally trampled. Before trampling, control sites had greater cyanobacterial biomass, soil surface stability, threshold friction velocities (TFV, i.e. the wind speed required to move soil particles), and sediment yield than sites that had been more recently disturbed by military manoeuvres. After trampling, all sites showed a large drop in TFVs and a concomitant increase in sediment yield. Simple correlation analyses showed that the decline in TFVs and the rise in sediment yield were significantly related to cyanobacterial biomass (as indicated by soil chlorophyll a). However, chlorophyll a amounts were very low compared to chlorophyll a amounts found at cooler desert sites, where chlorophyll a is often the most important factor in determining TFV and sediment yield. Multiple regression analyses showed that other factors at Fort Irwin were more important than cyanobacterial biomass in determining the overall site susceptibility to wind erosion. These factors included soil texture (especially the fine, medium and coarse sand fractions), rock cover, and the inherent stability of the soil (as indicated by subsurface soil stability tests). Thus, our results indicate that there is a threshold of biomass below which cyanobacterial crusts are not the dominant factor in soil vulnerability to wind erosion. Most undisturbed soil surfaces in the Mojave Desert region produce very little sediment, but even moderate disturbance increases soil loss from these sites. Because current weathering rates and dust inputs are very low, soil formation rates are low as well. Therefore, soil loss in this region is likely to have long-term effects.

[Diurnal and Seasonal Dynamic Variation of Soil Respiration and Its Influencing Factors of Different Fenced Enclosure Years in Desert Steppec].

PubMed

Cui, Hai; Zhang, Ya-hong

2016-04-15

The fenced measures could improve the ecological environment of degraded grassland, it's a main measure for restoration of degraded grassland vegetation in China. Soil respiration (Rs) is an important component of an ecosystem's carbon cycle and the main pathway for carbon moving from the ecosystem to the atmosphere. In order to explore soil respiration characteristics and influencing factors of the different fenced years in arid desert grassland, we continuously observed Rs rate and environmental factors in the growing season of fenced enclosure 11a, 7a and no fenced (CK) desert steppe in Ningxia. The results showed that: (1) Both the diurnal andseasonal variations of Rs rate showed a single asymmetric peak changing in fenced enclosure of 11 years, 7 years, CK desert steppe. On the daily scale, the maximum and minimum values of Rs rate were found in the periods of 12:00-16:00 and 00:00-06:00,respectively. On the seasonal variation scale, the maximum value of Rs rate occurred in August with suitable precipitation and temperature conditions. And the Rs rate of the growing season of different fenced enclosure years was in the order of 11a [0.143 g · (m² · h)⁻¹] > 7a [0.138 g · (m² · h)⁻¹] > CK [0.106 g · (m2 - h)⁻¹]. (2) According to statistical analysis, it indicated that R² rate had a significant exponential positive relationship with air and soil temperature in fenced enclosure of 11 years, 7 years, CK desert steppe (P < 0.01). The order of the correlation of Rs rate and temperature was shown as soil surface temperature (R²: 0.408-0.413) > air temperature (R2: 0.355-0.376) > 5-20 cm soil temperature (R2: 0.263-0.394). The temperature sensitivity coefficient Q, increased gradually with the soil depth, and Q1, of different fenced enclosure years was showed as 11 a (2.728) > 7a (2.436) > CK (2.086). (3) A significant quadratic function model (P < 0.05) was observed for the relationship between Rs rate and relative air humidity, soil moisture content of fenced enclosure 11a, 7a and CK desert steppe in the whole growing season. Rs rate had a significant linear negative correlation with air carbon dioxide concentration (P < 0.01), a linear positive correlation with the windspeed (P < 0.05), and a significant weak linear positive correlation with light intensity (P < 0.01). (4) It showed that Rs increasedwith increasing fenced closure years in arid desert steppe, and temperature sensitivity coefficient Q₁₀ also increased with increasing fenced enclosure years. To sum up, 0-20 cm soil temperature and moisture were the main influencing factors of soil respiration of desert steppe. This study has important implications to understand the role that different fenced enclosure years play in carbon emission. Such information will lay a foundation for assessing carbon source or carbon sequestration of different fenced enclosure years in desert steppe. Therefore, our research results have important function for better managing grassland in desert steppe in Ningxia and other arid and semiarid areas of North China.

Geochemistry, geomorphology, and soil petrology of the Mars-like soils from Pampas de la Joya hyper-arid desert

NASA Astrophysics Data System (ADS)

Valdivia-Silva, Julio E.; Ortega-Gutierrez, Fernando; Bonaccorsi, Rosalba

2016-07-01

Mars-like environments on Earth are used as a model to guide the investigation of possible habitable Martian environments. In this work we evaluate and analyze the geology, geomorphology and soil petrology of the Pampas de La Joya Desert in southern Peru, in order to understand the processes that transformed the region into a Mars-like environment. Using a multidisciplinary approach, we analyze the different soils that compose the floor of the desert, as well as describe and interpret the post-Oligocene landscape emphasizing some Mars-like features with respect to its acting geologic processes, the habitability potential under very low levels of nutrients and water, and its suitability to sustain microorganisms or their remains. Importantly, this work is part of a bigger project that use Mars-like soils, looking for new crops capable to grow in extreme environments.

Evidence of heat-resistant microorganisms with a special emphasis on filamentous Actinomycetes in hyper-arid soils of Gandom Beryan area, Lut Desert, Iran.

PubMed

Mazkour, Somaye; Hosseinzadeh, Saeid; Shekarforoush, Seyed Shahram

2017-12-01

In the present study, the Lut Desert, Iran was chosen as one of the hottest places in the world (with the recorded temperature of 70.7°C during 2003-2009) to find out whether any heat-resistant microorganisms were present in the soil. The samples were collected from surface and depth of three identified places of Gandom Beryan in the Lut Desert. Chemical analysis and enumeration of the total bacteria, yeasts and molds were performed. Four selective culture media were employed to isolate the filamentous actinomycetes. The suspected colonies were further confirmed using PCR assay. Then the culture cell-free-supernatants (CFS) of isolates were used to investigate their antimicrobial activity against Staphylococcus aureus, Bacillus cereus, Salmonella Typhimurium and Escherichia coli . Chemical analysis of the samples included moisture (0.2-0.9%), ash (85-91%), organic materials (8.3-14.4%), pH (7.59-9.40) and electrical conductivity (380-2000 μS/cm). The number of isolated bacteria and molds varied from 0-20 to 0-40 CFU/g, respectively. Number of Actinomycetes isolated from the soil samples were between 0-12.2 CFU/g. Nine isolated colonies were identified as filamentous Actinomycetes. To determine the possibility of antimicrobial peptides, the CFS (cell-free supernatant) was firstly neutralized by NaOH and catalase. The results showed that none of the CFS of the isolates was effective against E. coli, S. Typhimurium and S. aureus , while the maximum inhibitory effect was investigated on B. cereus , which was 33.1%±1.19% (mean ± SD). The results of the current study imply the presence of rare heat-resistant microorganisms in the soil of Gandom Beryan which may be further used to find out more about the function of natural bioactive compounds. Actinomycetes, as extremophile microorganisms, have shown the greatest genomic and metabolic diversity, as such the discovery of the novel Actinomycetes as a source of secondary metabolites is essential.

Soil characteristics of semidesert soils along a precipitation gradient in the Negev (Israel)

NASA Astrophysics Data System (ADS)

Steckenmesser, Daniel; Drahorad, Sylvie; Felix-Henningsen, Peter

2010-05-01

The sand dunes of the north-western Negev desert (Israel) show a unique precipitation gradient on a short distance. This area is build up by the same parent material and suited to investigate the influence of changes in rainfall on soil characteristics in semi-desert ecosystems. The study site is the western extension of the Sinai sand field, the sand dunes are stabilised by biological soil crusts and perennial vegetation like Retama raetam. Along this precipitation gradient the three investigation areas Nizzana South (90mm ^a-), Nizzana 84 (130mm ^a-1) and Nizzana 69 (170mm ^a-1) are situated. At every study site two soil profiles were investigated, each under the legume Retama raetam and in the bare interspace covered by biological soil crusts. The soil samples were taken at the interdune positions at every study site. The soil sampling included the biological soil crust, the topsoil and the subsoil up to 1,5 m. The narrow sampling of 20cm wide steps allow a mapping of the distribution of nutrients, carbonates and soluble salts of in order to show the impact of perennial plants and rainfall on soil properties. Soluble salts and nutrients were measured in a 1:5 water extraction, calcium carbonate was determined according to Scheibler. The data shows a strong influence of perennial shrubs on the deposition of dust and the redistribution of nutrients compared to the bare interspace. The distribution of highly and less soluble salts below the perennial shrub proofs a shallower water infiltration than in the comparable interspace area. The interspace between the plants is covered by a biological soil crust, which also strongly influences the matter fluxes by nutrient-fixation, creation of runoff and stabilization of the soil surface. These biological soil crusts show higher amounts of elements than the subsoils. The comparison of the three areas along the rainfall gradient shows higher inputs of soluble salts with increasing precipitation due to wet deposition, while carbonate contents are negatively correlated with decreasing precipitation. This is related to a higher dust input in the southern study site, which was generated in the lime stone Negev. Higher amounts of rainfall introduce higher element leaching. Perennial plants cover the surface and reduce infiltration. Inputs into the soils through dust have to be evaluated for every location to separate between effects of deposition and rainfall.

Soil compartment is a major determinant of the impact of simulated rainfall on desert microbiota.

PubMed

Aslam, Shazia N; Dumbrell, Alex J; Sabir, Jamal S; Mutwakil, Mohammed H Z; Baeshen, Mohammed M N; Abo-Aba, Salah E M; Clark, Dave R; Yates, Steven A; Baeshen, Nabih A; Underwood, Graham J C; McGenity, Terry J

2016-12-01

Although desert soils support functionally important microbial communities that affect plant growth and influence many biogeochemical processes, the impact of future changes in precipitation patterns on the microbiota and their activities is largely unknown. We performed in-situ experiments to investigate the effect of simulated rainfall on bacterial communities associated with the widespread perennial shrub, Rhazya stricta in Arabian desert soils. The bacterial community composition was distinct between three different soil compartments: surface biological crust, root-attached, and the broader rhizosphere. Simulated rainfall had no significant effect on the overall bacterial community composition, but some population-level responses were observed, especially in soil crusts where Betaproteobacteria, Sphingobacteria, and Bacilli became more abundant. Bacterial biomass in the nutrient-rich crust increased three-fold one week after watering, whereas it did not change in the rhizosphere, despite its much higher water retention. These findings indicate that between rainfall events, desert-soil microbial communities enter into stasis, with limited species turnover, and reactivate rapidly and relatively uniformly when water becomes available. However, microbiota in the crust, which was relatively enriched in nutrients and organic matter, were primarily water-limited, compared with the rhizosphere microbiota that were co-limited by nutrients and water. © 2016 The Authors. Environmental Microbiology published by Society for Applied Microbiology and John Wiley & Sons Ltd.

Patton's tracks in the Mojave Desert, USA: An ecological legacy

USGS Publications Warehouse

Belnap, Jayne; Warren, Steven D.

2002-01-01

Recovery of soil properties from World War II-era military training exercises in the Mojave Desert was measured approximately 55 years following disturbance. Tracks from military vehicles were still visible, particularly in areas of desert pavement. Soil penetrability was much lower in visible tracks than outside the tracks. Soils in tracks had fewer rocks in the top 10cm of the soil profile than adjacent untracked soils. Larger particles (> 4.8mm) formed a moderately well-developed pavement outside of the tracks, while smaller, loose particles ( h 4.8mm) dominated the surface of the tracks. The time required to restore the desert pavement is likely to be measured in centuries. Based on biomass estimates, the cyanobacterial component of biological soil crusts had recovered 46-65% in tracks, compared to outside the tracks. Overall recovery of lichen cover has been much slower. Under plant canopies, cover of Collema tenax was not significantly different between areas inside and outside the tracks; however, recovery of Catapyrenium squamulosum was only 36%. In plant interspaces with less favorable moisture and temperature conditions, C. tenax showed a 6% recovery and C. squamulosum a 3% recovery. Assuming recovery of the biological soil crust is linear, and complete only when the most sensitive species (C. squamulosum) has fully recovered in the most limiting microhabitats (plant interspaces), it may require almost two millennia for full recovery of these areas.

The stable isotope composition of halite and sulfate of hyperarid soils and its relation to aqueous transport

NASA Astrophysics Data System (ADS)

Amundson, Ronald; Barnes, Jaime D.; Ewing, Stephanie; Heimsath, Arjun; Chong, Guillermo

2012-12-01

Halite (NaCl) and gypsum or anhydrite (CaSO4) are water-soluble minerals found in soils of the driest regions of Earth, and only modest attention has been given to the hydrological processes that distribute these salts vertically in soil profiles. The two most notable chloride and sulfate-rich deserts on earth are the Dry Valleys of Antarctica and the Atacama Desert of Chile. While each is hyperarid, they possess very different hydrological regimes. We first show, using previously published S and O isotope data for sulfate minerals, that downward migration of water and sulfate is the primary mechanism responsible for depth profiles of sulfate concentration, and S and O isotopes, in both deserts. In contrast, we found quite different soluble Cl concentration and Cl isotope profiles between the two deserts. For Antarctic soils with an ice layer near the soil surface, the Cl concentrations increase with decreasing soil depth, whereas the ratio of 37Cl/35Cl increases. Based on previous field observations by others, we found that thermally driven upward movement of brine during the winter, described by an advection/diffusion model, qualitatively mimics the observed profiles. In contrast, in the Atacama Desert where rare but relatively large rains drive Cl downward through the profiles, Cl concentrations and 37Cl/35Cl ratios increased with depth. The depth trends in Cl isotopes are more closely explained by a Rayleigh-like model of downward fluid flow. The isotope profiles, and our modeling, reveal the similarities and differences between these two very arid regions on Earth, and are relevant for constraining models of fluid flow in arid zone soil and vadose zone hydrology.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Halvorson, J.J.; Bolton, H. Jr.; Smith, J.L.

Artemisia tridentata is a prominent shrub of cool deserts that affects the soil in which it grows. We sampled adjacent burned and unburned sites to see if resource islands persisted in locations where shrubs had been removed by fire. The concentrations of soil variables near the location of burned Artemisia tridentata were smaller than under live Artemisia tridentata and did not vary as much with distance away from the plant axis. However, the patterns of soil variables in these remnant resource islands were still substantial. Significantly higher concentrations of total N and soil microbial C, and significantly higher electrical conductivitymore » were observed at the location of a burned Artemisia tridentata stem than at distances further away. The differences between burned and unburned soil were greatest in samples collected near the plant. In contrast, samples of burned or unburned soil were not distinguishable from each other at locations greater than about 50 cm away from a live Artemisia tridentata axis or a burned stump indicating that the resource island effect was most affected by removal of the plant and not by the fire.« less

Short-term effects of experimental fires on a Mojave Desert seed bank

USGS Publications Warehouse

Esque, Todd C.; Young, James A.; Tracy, C. Richard

2010-01-01

A Mojave Desert shrub community was experimentally burned to understand changes in seed bank of desert annual plant species in response to wildfire. Seed mortality ranged from 55 to 80%, and fire caused significant losses of native and alien annual seeds. Schismus arabicus, Schismus barbatus, Bromus madritensis, Bromus tectorum, Erodium cicutarium and Plantago spp. made up >95% of the seed bank. Bromus spp. and Plantago spp. had proportionately greater mortality of seeds than did Schismus spp. and E. cicutarium. Schismus spp. can be lodged into soil cracks thus avoiding lethal temperatures. E. cicutarium has a self-drilling mechanism that places the seeds at greater depth in the soil. Greater seed mortality occurred beneath shrub canopies than interspaces for most species (Plantago, spp., Bromus spp., and E. cicutarium), but microsite had little effect on Schismus spp. Fire reduced the perennial Ambrosia dumosa densities under canopies. Fire reduced the mean number of species found in samples by about one species per plot and no species was extirpated on experimental plots. The relative abundances of common species did not change dramatically as a result of fire or microsite, however; seed densities varied by treatment and affected interpretations of species compositions.

Quadrulella texcalense sp. nov. from a Mexican desert: An unexpected new environment for hyalospheniid testate amoebae.

PubMed

Pérez-Juárez, Horacio; Serrano-Vázquez, Angélica; Kosakyan, Anush; Mitchell, Edward A D; Rivera Aguilar, Víctor M; Lahr, Daniel J G; Hernández Moreno, Mayra M; Cuellar, Humberto Macías; Eguiarte, Luis E; Lara, Enrique

2017-10-01

Quadrulella (Amoebozoa, Arcellinida, Hyalospheniidae) is a genus of testate amoebae with unmistakable morphology, which secretes characteristic square plates to reinforce the test. They are mainly known from fens and freshwater habitats and have never been documented in deserts. We describe a new species, Quadrulella texcalense, from biological soil crusts in the intertropical desert of Tehuacán (state of Puebla, Mexico). Quadrulella texcalense occurred only at altitudes between 2140 and 2221m.a.s.l., together with the bryophyte genera Pseudocrossidium, Weissia, Bryum, Didymodon, Neohyophyla and Aloina. The soil was extremely dry (moisture of 1.97-2.6%), which contrasts sharply with previous reports for the Quadrulella genus. Single cell mitochondrial cytochrome oxidase I (COI) barcoding of thirteen isolated cells showed an important morphological variability despite having all the same COI barcode sequence. Quadrulella texcalense was placed in a tree containing other Hyalsopheniidae, including a newly barcoded South African species, Q. elegans. Q. texcalense unambiguously branched within genus Quadrulella in a compact clade but with a long branch, suggesting accelerated evolution due to a transition towards a new environment and/or under-sampling. Copyright © 2017 Elsevier GmbH. All rights reserved.

Impacts of LUCC on soil properties in the riparian zones of desert oasis with remote sensing data: a case study of the middle Heihe River basin, China.

PubMed

Jiang, Penghui; Cheng, Liang; Li, Manchun; Zhao, Ruifeng; Duan, Yuewei

2015-02-15

Large-scale changes in land use and land cover over long timescales can induce significant variations in soil physicochemical properties, particularly in the riparian zones of arid regions. Frequent reclamation of wetlands and grasslands and intensive agricultural activity have induced significant changes in both land use/cover and soil physicochemical properties in the riparian zones of the middle Heihe River basin of China. The present study aims to explore whether land use/land cover change (LUCC) can well explain the variations in soil properties in the riparian zones of the middle Heihe River basin. To achieve this, we mapped LUCC and quantified the type of land use change using remote sensing images, topographic maps, and GIS analysis techniques. Forty-two sites were selected for soil and vegetation sampling. Then, physical and chemical experiments were employed to determine soil moisture, soil bulk density, soil pH, soil organic carbon, total nitrogen, total potassium, total phosphorous, available nitrogen, available potassium, and available phosphorous. The Independent-Samples Kruskal-Wallis Test, principal component analysis, and a scatter matrix were used to analyze the effects of LUCC on soil properties. The results indicate that the majority of the parameters investigated were affected significantly by LUCC. In particular, soil moisture and soil organic carbon can be explained well by land cover change and land use change, respectively. Furthermore, changes in soil moisture could be attributed primarily to land cover changes. Changes in soil organic carbon were correlated closely with the following land use change types: wetlands-arable, forest-grasslands, and grasslands-desert. Other parameters, including pH and total K, were also found to exhibit significant correlations with LUCC. However, changes in soil nutrients were shown to be induced most probably by human agricultural activity (i.e. fertilize, irrigation, tillage, etc.), rather than by simple conversions from one land use/cover types to the others. Copyright © 2014 Elsevier B.V. All rights reserved.

Community Characteristics and Leaf Stoichiometric Traits of Desert Ecosystems Regulated by Precipitation and Soil in an Arid Area of China.

PubMed

Zhang, Xiaolong; Guan, Tianyu; Zhou, Jihua; Cai, Wentao; Gao, Nannan; Du, Hui; Jiang, Lianhe; Lai, Liming; Zheng, Yuanrun

2018-01-10

Precipitation is a key environmental factor determining plant community structure and function. Knowledge of how community characteristics and leaf stoichiometric traits respond to variation in precipitation is crucial for assessing the effects of global changes on terrestrial ecosystems. In this study, we measured community characteristics, leaf stoichiometric traits, and soil properties along a precipitation gradient (35-209 mm) in a desert ecosystem of Northwest China to explore the drivers of these factors. With increasing precipitation, species richness, aboveground biomass, community coverage, foliage projective cover (FPC), and leaf area index (LAI) all significantly increased, while community height decreased. The hyperarid desert plants were characterized by lower leaf carbon (C) and nitrogen/phosphorus (N/P) levels, and stable N and P, and these parameters did not change significantly with precipitation. The growth of desert plants was limited more by N than P. Soil properties, rather than precipitation, were the main drivers of desert plant leaf stoichiometric traits, whereas precipitation made the biggest contribution to vegetation structure and function. These results test the importance of precipitation in regulating plant community structure and composition together with soil properties, and provide further insights into the adaptive strategy of communities at regional scale in response to global climate change.

Community Characteristics and Leaf Stoichiometric Traits of Desert Ecosystems Regulated by Precipitation and Soil in an Arid Area of China

PubMed Central

Guan, Tianyu; Zhou, Jihua; Cai, Wentao; Gao, Nannan; Du, Hui; Jiang, Lianhe; Lai, Liming; Zheng, Yuanrun

2018-01-01

Precipitation is a key environmental factor determining plant community structure and function. Knowledge of how community characteristics and leaf stoichiometric traits respond to variation in precipitation is crucial for assessing the effects of global changes on terrestrial ecosystems. In this study, we measured community characteristics, leaf stoichiometric traits, and soil properties along a precipitation gradient (35–209 mm) in a desert ecosystem of Northwest China to explore the drivers of these factors. With increasing precipitation, species richness, aboveground biomass, community coverage, foliage projective cover (FPC), and leaf area index (LAI) all significantly increased, while community height decreased. The hyperarid desert plants were characterized by lower leaf carbon (C) and nitrogen/phosphorus (N/P) levels, and stable N and P, and these parameters did not change significantly with precipitation. The growth of desert plants was limited more by N than P. Soil properties, rather than precipitation, were the main drivers of desert plant leaf stoichiometric traits, whereas precipitation made the biggest contribution to vegetation structure and function. These results test the importance of precipitation in regulating plant community structure and composition together with soil properties, and provide further insights into the adaptive strategy of communities at regional scale in response to global climate change. PMID:29320458

Soil microbial diversity in the vicinity of desert shrubs.

PubMed

Saul-Tcherkas, Vered; Unc, Adrian; Steinberger, Yosef

2013-04-01

Water and nutrient availability are the major limiting factors of biological activity in arid and semiarid ecosystems. Therefore, perennial plants have developed different ecophysiological adaptations to cope with harsh conditions. The chemical profile of the root exudates varies among plant species and this can induce variability in associated microbial populations. We examined the influence of two shrubs species, Artemisia sieberi and Noaea mucronata, on soil microbial diversity. Soil samples were collected monthly, from December 2006 to November 2007, near canopies of both shrubs (0-10-cm depth). Samples were used for abiotic tests and determination of soil bacterial diversity. No significant differences were found in the abiotic variables (soil moisture, total organic matter, and total soluble nitrogen (TSN)) between soil samples collected from under the two shrubs during the study period. No obvious differences in the Shannon-Weaver index, evenness values, or total phylogenetic distances were found for the soil microbial communities. However, detailed denaturing gradient gel electrophoresis (DGGE) clustering as well as taxonomic diversity analyses indicated clear shifts in the soil microbial community composition. These shifts were governed by seasonal variability in water availability and, significantly, by plant species type.

Soil wind erosion in ecological olive trees in the Tabernas desert (southeastern Spain): a wind tunnel experiment

NASA Astrophysics Data System (ADS)

Asensio, Carlos; Lozano, Francisco Javier; Gallardo, Pedro; Giménez, Antonio

2016-08-01

Wind erosion is a key component of the soil degradation processes. The purpose of this study is to find out the influence of material loss from wind on soil properties for different soil types and changes in soil properties in olive groves when they are tilled. The study area is located in the north of the Tabernas Desert, in the province of Almería, southeastern Spain. It is one of the driest areas in Europe, with a semiarid thermo-Mediterranean type of climate. We used a new wind tunnel model over three different soil types (olive-cropped Calcisol, Cambisol and Luvisol) and studied micro-plot losses and deposits detected by an integrated laser scanner. We also studied the image processing possibilities for examining the particles attached to collector plates located at the end of the tunnel to determine their characteristics and whether they were applicable to the setup. Samples collected in the traps at the end of the tunnel were analyzed. We paid special attention to the influence of organic carbon, carbonate and clay contents because of their special impact on soil crusting and the wind-erodible fraction. A principal components analysis (PCA) was carried out to find any relations on generated dust properties and the intensity and behavior of those relationships. Component 1 separated data with high N and OC contents from samples high in fine silt, CO3= and available K content. Component 2 separated data with high coarse silt and clay contents from data with high fine sand content. Component 3 was an indicator of available P2O5 content. Analysis of variance (ANOVA) was carried out to analyze the effect of soil type and sampling height on different properties of trapped dust. Calculations based on tunnel data showed overestimation of erosion in soil types and calculation of the fraction of soil erodible by wind done by other authors for Spanish soils. As the highest loss was found in Cambisols, mainly due to the effect on soil crusting and the wind-erodible fraction aggregation of CaCO3, a Stevia rebaudiana cover crop was planted between the rows in this soil type and this favored retention of particles in vegetation.

[Effects of the grain size and thickness of dust deposits on soil water and salt movement in the hinterland of the Taklimakan Desert].

PubMed

Sun, Yan-Wei; Li, Sheng-Yu; Xu, Xin-Wen; Zhang, Jian-Guo; Li, Ying

2009-08-01

By using mcirolysimeter, a laboratory simulation experiment was conducted to study the effects of the grain size and thickness of dust deposits on the soil water evaporation and salt movement in the hinterland of the Taklimakan Desert. Under the same initial soil water content and deposition thickness condition, finer-textured (<0.063 mm) deposits promoted soil water evaporation, deeper soil desiccation, and surface soil salt accumulation, while coarse-textured (0.063-2 mm) deposits inhibited soil water evaporation and decreased deeper soil water loss and surface soil salt accumulation. The inhibition effect of the grain size of dust deposits on soil water evaporation had an inflection point at the grain size 0.20 mm, i. e., increased with increasing grain size when the grain size was 0.063-0.20 mm but decreased with increasing grain size when the grain size was > 0.20 mm. With the increasing thickness of dust deposits, its inhibition effect on soil water evaporation increased, and there existed a logarithmic relationship between the dust deposits thickness and water evaporation. Surface soil salt accumulation had a negative correlation with dust deposits thickness. In sum, the dust deposits in study area could affect the stability of arid desert ecosystem.

Saccharide Composition in Fine and Coarse Particulate Matter and Soils in Central Arizona and Use of Saccharides as Molecular Markers for Source Apportionment

NASA Astrophysics Data System (ADS)

Jia, Y.; Clements, A.; Fraser, M.

2009-04-01

The desert southwestern United States routinely exceeds health-based standards for coarse particulate matter [1]. PM10 concentrations are high in both urban and rural areas and are believed to originate from fugitive dust emissions from agricultural fields and roads and soil erosion from the surrounding desert locations. Soil together with its associated biota contains a complex mixture of biogenic detritus, including plant detritus, airborne microbes comprised of bacteria, viruses, spores of lichens and fungi, small algae, and protozoan cysts [4][5], which can mostly become airborne when winds are strong enough and soil dry enough to be re-entrained into the atmosphere [3]. Other potential sources to PM10 may include primary biological aerosol particles (PBAPs), given a multitude of flower, grass, and fungal species that thrive in the Sonoran desert and actively release pollens and spores throughout the year [2]. However, because soil and fugitive dust is also believed to contain a large number of these biological particles and is considered as a secondary host of PBAPs [3] [4], the role and contribution of PBAPs as a direct ambient PM source in the desert southwest have not been clearly stated or investigated. In an effort to identify and assess the relative contribution of these and other major PM sources in the southwestern US region, and particularly to assess the contribution from soil and fugitive dust, a series of ambient PM samples and soil samples were collected in Higley, AZ, USA, a suburb of the Phoenix metropolitan area which has seen rapid urban sprawl onto agricultural lands. Because of their suggested ability to track biologically important organic materials from natural environment [4][6][7][8][9][10], saccharides were chosen as the key compounds to trace the release of soil dusts into the atmosphere, and to elucidate other major sources that contribute to the PM levels in this location in the arid southwestern US. To this end, saccharide compounds were analyzed in size segregated soil and ambient PM samples at Higley; intra- and inter- comparisons were made between the ambient PM and three types of soil dust samples (agricultural soil, native soil, road dust) based on the particle size (fine vs. coarse), seasonality, and relative composition of 12 saccharide compounds. Based on the ambient concentrations of major saccharides and a number of other specific compounds (including elemental and organic carbon, ions, metals, alkanes, organic acids, and polycyclic aromatic hydrocarbons) that are simultaneously resolved in Higley PM samples, a Positive Matrix Factorization (PMF) model was performed to determine the key contributors to PM10 and PM2.5 levels. Six distinct factors were isolated, with two factors dominated by the enrichment of saccharide compounds. There was not consistency between the source profiles of these two saccharide rich source factors with the saccharide composition of the local size-segregated soil samples, which implies that there may be other major sources contributing to ambient PM saccharides. One possible alternative is that PBAPs that are injected directly into the atmosphere instead of residing in the surface soil and being re-entrained through soil erosion or agricultural processing. To our knowledge, this study is the first of its kind to compare the saccharide composition between the fine and coarse fraction of different soils types in two seasons, and to relate the contribution from soil dust to ambient PM using saccharide species. REFERENCE [1] AirData: Access to Air Pollution data. [cited 2009 Jan 11, 2009]; Available from: http://www.epa.gov/air/data/index.html [2] Allergy and Asthma in the Southwestern United States. [cited 2009 Jan 11, 2009]; Available from: http://allergy.peds.arizona.edu/southwest/swpollen.html [3] Cox, C.S., Wathes, C.M., 1995. Bioaerosols Handbook, Lewis Publishers, NY [4] Simoneit, B.R.T., Elias, V.O., et al., 2004. "Sugars - Dominant water-soluble organic compounds in soils and characterization as tracers in atmospheric particulate matter", Environmental Science and Technology (38): 5939-5949. [5] Simoneit, B.R.T., Mazurek, M.A., 1981. "Air Pollution - the Organic-Components", Crc Critical Reviews in Environmental Control (11): 219-276. [6] Medeiros, P.M., Simoneit, B.R.T, 2007. "Analysis of sugars in environmental samples by gas chromatography-mass spectrometry", Jouranl of Chromatography A (1141): 271-278. [7] Rogge, W.F., Medeiros, P.M, et al., 2007. ‘Organic marker compounds in surface soils of crop fields from the San Joaquin Valley fugitive dust characterization study", Atmospheric Environment (41): 8183-8204. [8] Bauer, H., Claeys, M., et al., 2008. "Arabitol and mannitol as tracers for the quantification of airborne fungal spores", Atmospheric Environment (42): 588-593. [9] Elbert, W., Taylor, P.E., et al., 2007. "Contribution of fungi to primary biogenic aerosols in the atmosphere: wet and dry discharged spores, carbohydrates, and inorganic ions", Atmospheric Chemistry and Physics (7): 4569-4588. [10] Graham, B., Guyon, P., et al., 2003. "Organic compounds present in the natural Amazonian aerosol: Characterization by gas chromatography-mass spectrometry", Journal of Geophysical Research (108): 4766, doi:10.1029/2003JD003990.

Pedological and geological relationships with soil lichen and moss distribution in the eastern Mojave Desert, CA, USA

USGS Publications Warehouse

Belnap, Jayne; Miller, David M.; Bedford, David R.; Phillips, Susan L.

2014-01-01

Biological soil crusts (biocrusts) are ubiquitous in drylands globally. Lichens and mosses are essential biocrust components and provide a variety of ecosystem services, making their conservation and management of interest. Accordingly, understanding what factors are correlated with their distribution is important to land managers. We hypothesized that cover would be related to geologic and pedologic factors. We sampled 32 sites throughout the eastern Mojave Desert, stratifying by parent material and the age of the geomorphic surfaces. The cover of lichens and mosses on ‘available ground’ (L + Mav; available ground excludes ground covered by rocks or plant stems) was higher on limestone and quartzite-derived soils than granite-derived soils. Cover was also higher on moderately younger-aged geomorphic surfaces (Qya2, Qya3, Qya4) and cutbanks than on very young (Qya1), older-aged surfaces (Qia1, Qia2), or soils associated with coppice mounds or animal burrowing under Larrea tridentata. When all sites and parent materials were combined, soil texture was the most important factor predicting the occurrence of L + Mav, with cover positively associated with higher silt, very fine sand, and fine sand fractions and negatively associated with the very coarse sand fraction. When parent materials were examined separately, nutrients such as available potassium, iron, and calcium became the most important predictors of L + Mav cover.

Comparison of trailside degradation across a gradient of trail use in the Sonoran Desert.

PubMed

Rowe, Helen Ivy; Tluczek, Melanie; Broatch, Jennifer; Gruber, Dan; Jones, Steve; Langenfeld, Debbie; McNamara, Peggy; Weinstein, Leona

2018-02-01

As recreational visitation to the Sonoran Desert increases, the concern of scientists, managers and advocates who manage its natural resources deepens. Although many studies have been conducted on trampling of undisturbed vegetation and the effects of trails on adjacent plant and soil communities, little such research has been conducted in the arid southwest. We sampled nine 450-m trail segments with different visitation levels in Scottsdale's McDowell Sonoran Preserve over three years to understand the effects of visitation on soil erosion, trailside soil crusts and plant communities. Soil crust was reduced by 27-34% near medium and high use trails (an estimated peak rate of 13-70 visitors per hour) compared with control plots, but there was less than 1% reduction near low use trails (peak rate of two to four visitors per hour). We did not detect soil erosion in the center 80% of the trampled area of any of the trails. The number of perennial plant species dropped by less than one plant species on average, but perennial plant cover decreased by 7.5% in trailside plots compared with control plots 6 m off-trail. At the current levels of visitation, the primary management focus should be keeping people on the originally constructed trail tread surface to reduce impact to adjacent soil crusts. Copyright © 2017 Elsevier Ltd. All rights reserved.

Effects of seasonal grazing, drought, fire, and carbon enrichment on soil microarthropods in a desert grassland

USDA-ARS?s Scientific Manuscript database

This study was designed to test hypotheses about the combined effects of short-term, seasonal grazing with seasonal drought, fire, and carbon enrichment on soil microarthropod communities in a Chihuahuan Desert grassland. The study was conducted in eighteen 0.5 ha plots following three consecutive y...

Impact of elevated precipitation, nitrogen deposition and warming on soil respiration in a temperate desert

NASA Astrophysics Data System (ADS)

Yue, Ping; Cui, Xiaoqing; Gong, Yanming; Li, Kaihui; Goulding, Keith; Liu, Xuejun

2018-04-01

Soil respiration (Rs) is the most important source of carbon dioxide emissions from soil to atmosphere. However, it is unclear what the interactive response of Rs would be to environmental changes such as elevated precipitation, nitrogen (N) deposition and warming, especially in unique temperate desert ecosystems. To investigate this an in situ field experiment was conducted in the Gurbantunggut Desert, northwest China, from September 2014 to October 2016. The results showed that precipitation and N deposition significantly increased Rs, but warming decreased Rs, except in extreme precipitation events, which was mainly through its impact on the variation of soil moisture at 5 cm depth. In addition, the interactive response of Rs to combinations of the factors was much less than that of any single-factor, and the main response was a positive effect, except for the response from the interaction of increased precipitation and high N deposition (60 kg N ha-1 yr-1). Although Rs was found to show a unimodal change pattern with the variation of soil moisture, soil temperature and soil NH4+-N content, and it was significantly positively correlated to soil dissolved organic carbon (DOC) and pH, a structural equation model found that soil temperature was the most important controlling factor. Those results indicated that Rs was mainly interactively controlled by the soil multi-environmental factors and soil nutrients, and was very sensitive to elevated precipitation, N deposition and warming. However, the interactions of multiple factors largely reduced between-year variation of Rs more than any single-factor, suggesting that the carbon cycle in temperate deserts could be profoundly influenced by positive carbon-climate feedback.

Variability of lipid constituents of the coil cyanobacterium Microcoleus vaginatus from the Dead Sea basin and Negev desert.

PubMed

Dembitsky, V M; Dor, I; Shkrob, I

2000-12-01

A study of lipids of the soil cyanobacterium Microcoleus vaginatus, which was isolated from microbial crusts collected in the Dead Sea basin and in the Negev desert, was performed. Twenty-six hydrocarbons and fatty acids were separated and identified by GC/MS using serially coupled capillary columns of different polarity. Changes in the lipid composition were evaluated by comparison of samples collected from different locations. Heptadecane, 1-heptadecene, 6- and 7-methylheptadecane, hexadecanoic and 9(Z)-octadecenoic acids were identified as the major constituents. Biochemical mechanisms of production of the different lipid compounds under UV irradiation are proposed.

Spatial variation in edaphic characteristics is a stronger control than nitrogen inputs in regulating soil microbial effects on a desert grass

DOE Office of Scientific and Technical Information (OSTI.GOV)

Chung, Y. Anny; Sinsabaugh, Robert L.; Kuske, Cheryl Rae

Increased atmospheric nitrogen (N) deposition can have wide-ranging effects on plant community structure and ecosystem function, some of which may be indirectly mediated by soil microbial responses to an altered biogeochemical environment. In this study, soils from a field N fertilization experiment that spanned a soil texture gradient were used as inocula in the greenhouse to assess the indirect effects of soil microbial communities on growth of a desert grass. Plant performance and interaction with soil microbiota were evaluated via plant above- and belowground biomass, leaf N concentration, and root fungal colonization. Nitrogen fertilization in the field increased the benefitsmore » of soil microbial inoculation to plant leaf N concentration, but did not alter the effect of soil microbes on plant growth. Plant-microbe interaction outcomes differed most strongly among sites with different soil textures, where the soil microbial community from the sandiest site was most beneficial to host plant growth. In conclusion, the findings of this study suggest that in a desert grassland, increases in atmospheric N deposition may exert a more subtle influence on plant-microbe interactions by altering plant nutrient status, whereas edaphic factors can alter the whole-plant growth response to soil microbial associates.« less

Spatial variation in edaphic characteristics is a stronger control than nitrogen inputs in regulating soil microbial effects on a desert grass

DOE PAGES

Chung, Y. Anny; Sinsabaugh, Robert L.; Kuske, Cheryl Rae; ...

2017-03-22

Increased atmospheric nitrogen (N) deposition can have wide-ranging effects on plant community structure and ecosystem function, some of which may be indirectly mediated by soil microbial responses to an altered biogeochemical environment. In this study, soils from a field N fertilization experiment that spanned a soil texture gradient were used as inocula in the greenhouse to assess the indirect effects of soil microbial communities on growth of a desert grass. Plant performance and interaction with soil microbiota were evaluated via plant above- and belowground biomass, leaf N concentration, and root fungal colonization. Nitrogen fertilization in the field increased the benefitsmore » of soil microbial inoculation to plant leaf N concentration, but did not alter the effect of soil microbes on plant growth. Plant-microbe interaction outcomes differed most strongly among sites with different soil textures, where the soil microbial community from the sandiest site was most beneficial to host plant growth. In conclusion, the findings of this study suggest that in a desert grassland, increases in atmospheric N deposition may exert a more subtle influence on plant-microbe interactions by altering plant nutrient status, whereas edaphic factors can alter the whole-plant growth response to soil microbial associates.« less

Spatial variation in edaphic characteristics is a stronger control than nitrogen inputs in regulating soil microbial effects on a desert grass

USGS Publications Warehouse

Chung, Y. Anny; Sinsabaugh, Robert L; Kuske, Cheryl R.; Reed, Sasha C.; Rudgers, Jennifer A.

2017-01-01

Increased atmospheric nitrogen (N) deposition can have wide-ranging effects on plant community structure and ecosystem function, some of which may be indirectly mediated by soil microbial responses to an altered biogeochemical environment. In this study, soils from a field N fertilization experiment that spanned a soil texture gradient were used as inocula in the greenhouse to assess the indirect effects of soil microbial communities on growth of a desert grass. Plant performance and interaction with soil microbiota were evaluated via plant above- and belowground biomass, leaf N concentration, and root fungal colonization. Nitrogen fertilization in the field increased the benefits of soil microbial inoculation to plant leaf N concentration, but did not alter the effect of soil microbes on plant growth. Plant-microbe interaction outcomes differed most strongly among sites with different soil textures, where the soil microbial community from the sandiest site was most beneficial to host plant growth. The findings of this study suggest that in a desert grassland, increases in atmospheric N deposition may exert a more subtle influence on plant-microbe interactions by altering plant nutrient status, whereas edaphic factors can alter the whole-plant growth response to soil microbial associates.

Molecular analysis of stomach contents reveals important grass seeds in the winter diet of Baird's and Grasshopper sparrows, two declining grassland bird species

PubMed Central

Melgoza-Castillo, Alicia; Panjabi, Arvind O.; Sanchez-Flores, Alejandro; Martínez-Guerrero, José Hugo; Macías-Duarte, Alberto; Fernandez, Jesús A.

2017-01-01

We analyzed the diet of Baird’s Sparrow (Ammodramus bairdii) and Grasshopper Sparrow (A. savannarum) in three different sites and sampling periods across the Chihuahuan Desert in northern Mexico. DNA from seeds in regurgitated stomach contents was sequenced using NGS technology and identified with a barcoding approach using the P6 loop of the trnL intron as genetic marker. During each sampling period, we collected random soil samples to estimate seed availability in the soil seed bank. Due to the variability and size of the genetic marker, the resolution was limited to a family level resolution for taxonomic classification of seeds, but in several cases a genus level was achieved. Diets contained a high diversity of seeds but were dominated by a limited number of genera/families. Seeds from Panicoideae (from the genera Panicum, Setaria, Eriochloa, Botriochloa, and Hackelochloa) contributed for the largest part to the diets (53 ± 19%), followed by Bouteloua (10 ± 12%). Depending on the site and sampling period, other important seeds in the diets were Eragrostideae, Pleuraphis, Asteraceae, Verbena, and Amaranthus. The most abundant seeds were not always preferred. Aristida and Chloris were common in the soil seed bank but these seeds were avoided by both bird species. Baird’s and Grasshopper sparrows did not differ in seed preferences. This work highlights the importance of range management practices that favor seed production of Panicoideae and Bouteloua grasses to enhance winter habitat use and survival of Baird’s and Grasshopper sparrows in the Chihuahuan Desert. PMID:29261732

Molecular analysis of stomach contents reveals important grass seeds in the winter diet of Baird's and Grasshopper sparrows, two declining grassland bird species.

PubMed

Titulaer, Mieke; Melgoza-Castillo, Alicia; Panjabi, Arvind O; Sanchez-Flores, Alejandro; Martínez-Guerrero, José Hugo; Macías-Duarte, Alberto; Fernandez, Jesús A

2017-01-01

We analyzed the diet of Baird's Sparrow (Ammodramus bairdii) and Grasshopper Sparrow (A. savannarum) in three different sites and sampling periods across the Chihuahuan Desert in northern Mexico. DNA from seeds in regurgitated stomach contents was sequenced using NGS technology and identified with a barcoding approach using the P6 loop of the trnL intron as genetic marker. During each sampling period, we collected random soil samples to estimate seed availability in the soil seed bank. Due to the variability and size of the genetic marker, the resolution was limited to a family level resolution for taxonomic classification of seeds, but in several cases a genus level was achieved. Diets contained a high diversity of seeds but were dominated by a limited number of genera/families. Seeds from Panicoideae (from the genera Panicum, Setaria, Eriochloa, Botriochloa, and Hackelochloa) contributed for the largest part to the diets (53 ± 19%), followed by Bouteloua (10 ± 12%). Depending on the site and sampling period, other important seeds in the diets were Eragrostideae, Pleuraphis, Asteraceae, Verbena, and Amaranthus. The most abundant seeds were not always preferred. Aristida and Chloris were common in the soil seed bank but these seeds were avoided by both bird species. Baird's and Grasshopper sparrows did not differ in seed preferences. This work highlights the importance of range management practices that favor seed production of Panicoideae and Bouteloua grasses to enhance winter habitat use and survival of Baird's and Grasshopper sparrows in the Chihuahuan Desert.

Biological Soil Crusts: Webs of Life in the Desert

USGS Publications Warehouse

Belnap, Jayne

2001-01-01

Although the soil surface may look like dirt to you, it is full of living organisms that are a vital part of desert ecosystems. This veneer of life is called a biological soil crust. These crusts are found throughout the world, from hot deserts to polar regions. Crusts generally cover all soil spaces not occupied by green plants. In many areas, they comprise over 70% of the living ground cover and are key in reducing erosion, increasing water retention, and increasing soil fertility. In most dry regions, these crusts are dominated by cyanobacteria (previously called blue-green algae), which are one of the oldest known life forms. Communities of soil crusts also include lichens, mosses, microfungi, bacteria, and green algae. These living organisms and their by-products create a continuous crust on the soil surface. The general color, surface appearance, and amount of coverage of these crusts vary depending on climate and disturbance patterns. Immature crusts are generally flat and the color of the soil, which makes them difficult to distinguish from bare ground. Mature crusts, in contrast, are usually bumpy and dark-colored due to the presence of lichens, mosses, and high densities of cyanobacteria and other organisms.

The use of spatial empirical models to estimate soil erosion in arid ecosystems.

PubMed

Abdullah, Meshal; Feagin, Rusty; Musawi, Layla

2017-02-01

The central objective of this project was to utilize geographical information systems and remote sensing to compare soil erosion models, including Modified Pacific South-west Inter Agency Committee (MPSIAC), Erosion Potential Method (EPM), and Revised Universal Soil Loss Equation (RUSLE), and to determine their applicability for arid regions such as Kuwait. The northern portion of Umm Nigga, containing both coastal and desert ecosystems, falls within the boundaries of the de-militarized zone (DMZ) adjacent to Iraq and has been fenced off to restrict public access since 1994. Results showed that the MPSIAC and EPM models were similar in spatial distribution of erosion, though the MPSIAC had a more realistic spatial distribution of erosion and presented finer level details. The RUSLE presented unrealistic results. We then predicted the amount of soil loss between coastal and desert areas and fenced and unfenced sites for each model. In the MPSIAC and EPM models, soil loss was different between fenced and unfenced sites at the desert areas, which was higher at the unfenced due to the low vegetation cover. The overall results implied that vegetation cover played an important role in reducing soil erosion and that fencing is much more important in the desert ecosystems to protect against human activities such as overgrazing. We conclude that the MPSIAC model is best for predicting soil erosion for arid regions such as Kuwait. We also recommend the integration of field-based experiments with lab-based spatial analysis and modeling in future research.

Soil microbial diversity, site conditions, shelter forest land, saline water drip-irrigation, drift desert.

PubMed

Jin, Zhengzhong; Lei, Jiaqiang; Li, Shengyu; Xu, Xinwen

2013-10-01

Soil microbes in forest land are crucial to soil development in extreme areas. In this study, methods of conventional culture, PLFA and PCR-DGGE were utilized to analyze soil microbial quantity, fatty acids and microbial DNA segments of soils subjected to different site conditions in the Tarim Desert Highway forest land. The main results were as follows: the soil microbial amount, diversity indexes of fatty acid and DNA segment differed significantly among sites with different conditions (F < F0.05 ). Specifically, the values were higher in the middle and base of dunes than the top part of dunes and hardened flat sand, but all values for dunes were higher than for drift sand. Bacteria was dominant in the soil microbial community (>84%), followed by actinomycetes and then fungi (<0.05%). Vertical differences in the soil microbial diversity were insignificant at 0-35 cm. Correlation analysis indicated that the forest trees grew better as the soil microbial diversity index increased. Therefore, construction of the Tarim Desert Highway shelter-forest promoted soil biological development; however, for enhancing sand control efficiency and promoting sand development, we should consider the effects of site condition in the construction and regeneration of shelter-forest ecological projects. © 2013 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Spatial distribution of heavy metal contamination in soils near a primitive e-waste recycling site.

PubMed

Quan, Sheng-Xiang; Yan, Bo; Yang, Fan; Li, Ning; Xiao, Xian-Ming; Fu, Jia-Mo

2015-01-01

The total concentrations of 12 heavy metals in surface soils (SS, 0-20 cm), middle soils (MS, 30-50 cm) and deep soils (DS, 60-80 cm) from an acid-leaching area, a deserted paddy field and a deserted area of Guiyu were measured. The results showed that the acid-leaching area was heavily contaminated with heavy metals, especially in SS. The mean concentrations of Ni, Cu, Zn, Cd, Sn, Sb and Pb in SS from the acid-leaching area were 278.4, 684.1, 572.8, 1.36, 3,472, 1,706 and 222.8 mg/kg, respectively. Heavy metal pollution in the deserted paddy field was mainly concentrated in SS and MS. The average values of Sb in SS and MS from the deserted paddy field were 16.3 and 20.2 mg/kg, respectively. However, heavy metal contamination of the deserted area was principally found in the DS. Extremely high concentrations of heavy metals were also observed at some special research sites, further confirming that the level of heavy metal pollution was very serious. The geoaccumulation index (Igeo) values revealed that the acid-leaching area was severely polluted with heavy metals in the order of Sb > Sn > Cu > Cd > Ni > Zn > Pb, while deserted paddy field was contaminated predominately by metals in the order of Sb > Sn > Cu. It was obvious that the concentrations of some uncommon contaminants, such as Sb and Sn, were higher than principal contaminants, such as Ni, Cu, Zn and Pb, suggesting that particular attention should be directed to Sn and Sb contamination in the future research of heavy metals in soils from e-waste-processing areas. Correlation analysis suggested that Li and Be in soils from the acid-leaching area and its surrounding environment might have originated from other industrial activities and from batteries, whereas Ni, Cu, Zn, Cd, Pb, Sn and Sb contamination was most likely caused by uncontrolled electronic waste (e-waste) processing. These results indicate the significant need for optimisation of e-waste-dismantling technologies and remediation of polluted soil environment.

Effects of sand burial and wind disturbances on moss soil crusts in a revegetated area of the Tennger Desert, Northern China

NASA Astrophysics Data System (ADS)

Jia, R. L.; Li, X. R.; Liu, L. C.; Gao, Y. H.

2012-04-01

Sand burial and wind are two predominant natural disturbances in the desert ecosystems worldwide. However, the effects of sand burial and wind disturbances on moss soil crusts are still largely unexplored. In this study, two sets of experiments were conducted separately to evaluated the effects of sand burial (sand depth of 0, 1, 2, 3 and 4 mm) and wind blowing (wind speed of 0.2, 3, 6 and 9ms-1) on ecophysiological variables of two moss soil crusts collected from a revegetated area of the Tengger Desert, Northern China. Firstly, the results from the sand burial experiment revealed that respiration rate was significantly decreased and that moss shoot elongation was significantly increased after burial. In addition, Bryum argenteum crust showed the fastest speed of emergence and highest tolerance index, followed by Didymodon vinealis crust. This sequence was consistent with the successional order of the two moss crusts that happened in our study area, indicating that differential sand burial tolerance explains their succession sequence. Secondly, the results from the wind experiment showed that CO2 exchange, PSII photochemical efficiency, photosynthetic pigments, shoot upgrowth, productivity and regeneration potential of the two moss soil crust mentioned above were all substantially depressed. Furthermore, D. vinealis crust exhibited stronger wind resistance than B. argenteum crust from all aspects mentioned above. And this is comparison was identical with their contrasting microhabitats with B. argenteum crust being excluded from higher wind speed microsites in the windward slopes, suggesting that the differential wind resistance of moss soil crusts explains their microdistribution pattern. In conclusion, the ecogeomorphological processes of moss soil crusts in desert ecosystems can be largely determined by natural disturbances caused by sand burial and wind blowing in desert ecosystems.

Hydroxy fatty acids in snow pit samples from Mount Tateyama in central Japan: Implications for atmospheric transport of microorganisms and plant waxes associated with Asian dust

NASA Astrophysics Data System (ADS)

Tyagi, Poonam; Kawamura, Kimitaka; Bikkina, Srinivas; Mochizuki, Tomoki; Aoki, Kazuma

2016-11-01

We report here the source apportionment of atmospheric soil microorganisms and higher plant metabolites based on chemical markers (hydroxy fatty acids: FAs) in the snowpack samples collected from Mount Tateyama in central Japan during spring 2009 (N = 6) and 2011 (N = 7). A homologous series of β-hydroxy FAs (C9-C20), constituents of Gram-negative bacteria (GNB), in snowpacks clearly suggest a long-range atmospheric transport of dust-associated bacteria followed by scavenging by snowflakes. Similarly, higher atmospheric abundances of α-(C16-C32) and ω-(C9-C30)-hydroxy FAs in the snow layers containing Asian dust revealed contributions from soil microbes and higher plant epicuticular waxes. Moreover, covariation between the concentrations of hydroxy FAs and water-soluble Ca2+ (dust tracer), together with calculated air mass backward trajectories, demonstrated their source regions such as the Taklamakan Desert, Gobi Desert, and Loess Plateau. A close match of molecular distributions of hydroxy FAs (with the predominance of ω- and β-isomers) is noteworthy between snowpack (present study) and springtime aerosols from Chichijima Island in the western North Pacific (WNP). This observation suggests a "below-cloud scavenging" of transported dust particles and associated soil microbes in the East Asian outflow by snowflakes. These distributions are, however, contrary to those observed in the fresh snow samples from Sapporo, northern Japan (predominance of α-hydroxy FAs), which could be explained by "in-cloud" microbial oxidation processes. This comparison, therefore, provides additional insights regarding the aeolian transport of soil microbes in the East Asian outflow to the WNP, which has not been available.

Statistical design and analysis of environmental studies for plutonium and other transuranics at NAEG ''safety-shot'' sites

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gilbert, R.O.; Eberhardt, L.L.; Fowler, E.B.

This paper is centered around the use of stratified random sampling for estimating the total amount (inventory) of $sup 239-240$Pu and uranium in surface soil at ten ''safety-shot'' sites on the Nevada Test Site (NTS) and Tonopah Test Range (TTR) that are currently being studied by the Nevada Applied Ecology Group (NAEG). The use of stratified random sampling has resulted in estimates of inventory at these desert study sites that have smaller standard errors than would have been the case had simple random sampling (no stratification) been used. Estimates of inventory are given for $sup 235$U, $sup 238$U, and $supmore » 239-240$Pu in soil at A Site of Area 11 on the NTS. Other results presented include average concentrations of one or more of these isotopes in soil and vegetation and in soil profile samples at depths to 25 cm. The regression relationship between soil and vegetation concentrations of $sup 235$U and $sup 238$U at adjacent sampling locations is also examined using three different models. The applicability of stratified random sampling to the estimation of concentration contours of $sup 239-240$Pu in surface soil using computer algorithms is also investigated. Estimates of such contours are obtained using several different methods. The planning of field sampling plans for estimating inventory and distribution is discussed. (auth)« less

Photosynthetic strategies of two Mojave Desert shrubs

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kleinkopf, G.E.; Hartsock, T.L.; Wallace, A.

1980-01-01

Photosynthetic production of two Mojave Desert shrubs was measured under natural growing conditions. Measurements of photosynthesis, transpiration, resistances to water vapor flux, soil moisture potential, and tissue water potential were made. Atriplex canescens (Pursh) Nutt., a member of the C/sub 4/ biochemical carbon dioxide fixation group was highly competitive in growth rate and production during conditions of adequate soil moisture. As soil moisture conditions declined to minus 40 bars, the net photosynthetic rate of Atriplex decreased to zero. However, the C/sub 3/ shrub species Larrea tridentata (Sesse and Moc. ex DC.) Cov. was able to maintain positive net photosynthetic productionmore » during conditions of high temperature and extreme low soil moisture through the major part of the season. The comparative advantages of the C/sub 4/ versus the C/sub 3/ pathway of carbon fixation was lost between these two species as the soil moisture potential declined to minus 40 bars. Desert plants have diffferent strategies for survival, one of the strategies being the C/sub 4/ biochemical carbon fixation pathway. However, many of the plants are members of the C/sub 3/ group. In this instance, the C/sub 4/ fixation pathway does not confer an added advantage to the productivity of the species in the Mojave Desert. Species distribution based on comparative photosynthetic production is discussed« less

Growing season net ecosystem CO2 exchange of two desert ecosystems with alkaline soils in Kazakhstan.

PubMed

Li, Longhui; Chen, Xi; van der Tol, Christiaan; Luo, Geping; Su, Zhongbo

2014-01-01

Central Asia is covered by vast desert ecosystems, and the majority of these ecosystems have alkaline soils. Their contribution to global net ecosystem CO2 exchange (NEE) is of significance simply because of their immense spatial extent. Some of the latest research reported considerable abiotic CO2 absorption by alkaline soil, but the rate of CO2 absorption has been questioned by peer communities. To investigate the issue of carbon cycle in Central Asian desert ecosystems with alkaline soils, we have measured the NEE using eddy covariance (EC) method at two alkaline sites during growing season in Kazakhstan. The diurnal course of mean monthly NEE followed a clear sinusoidal pattern during growing season at both sites. Both sites showed significant net carbon uptake during daytime on sunny days with high photosynthetically active radiation (PAR) but net carbon loss at nighttime and on cloudy and rainy days. NEE has strong dependency on PAR and the response of NEE to precipitation resulted in an initial and significant carbon release to the atmosphere, similar to other ecosystems. These findings indicate that biotic processes dominated the carbon processes, and the contribution of abiotic carbon process to net ecosystem CO2 exchange may be trivial in alkaline soil desert ecosystems over Central Asia.

Growing season net ecosystem CO2 exchange of two desert ecosystems with alkaline soils in Kazakhstan

PubMed Central

Li, Longhui; Chen, Xi; van der Tol, Christiaan; Luo, Geping; Su, Zhongbo

2014-01-01

Central Asia is covered by vast desert ecosystems, and the majority of these ecosystems have alkaline soils. Their contribution to global net ecosystem CO2 exchange (NEE) is of significance simply because of their immense spatial extent. Some of the latest research reported considerable abiotic CO2 absorption by alkaline soil, but the rate of CO2 absorption has been questioned by peer communities. To investigate the issue of carbon cycle in Central Asian desert ecosystems with alkaline soils, we have measured the NEE using eddy covariance (EC) method at two alkaline sites during growing season in Kazakhstan. The diurnal course of mean monthly NEE followed a clear sinusoidal pattern during growing season at both sites. Both sites showed significant net carbon uptake during daytime on sunny days with high photosynthetically active radiation (PAR) but net carbon loss at nighttime and on cloudy and rainy days. NEE has strong dependency on PAR and the response of NEE to precipitation resulted in an initial and significant carbon release to the atmosphere, similar to other ecosystems. These findings indicate that biotic processes dominated the carbon processes, and the contribution of abiotic carbon process to net ecosystem CO2 exchange may be trivial in alkaline soil desert ecosystems over Central Asia. PMID:24455157

Soil carbon storage in a small arid catchment in the Negev desert (Israel)

NASA Astrophysics Data System (ADS)

Hoffmann, Ulrike; Kuhn, Nikolaus

2010-05-01

The mineral soil represents a major pool in the global carbon cycle. The behavior of mineral soil as a carbon reservoir in global climate and environmental issues is far from fully understood and causes a serious lack of comparable data on mineral soil organic carbon (SOC) at regional scale. To improve our understanding of soil carbon sequestration, it is necessary to acquire regional estimates of soil carbon pools in different ecosystem types. So far, little attention has been given to Dryland ecosystems, but they are often considered as highly sensitive to environmental change, with large and rapid responses to even smallest changes of climate conditions. Due to this fact, Drylands, as an ecosystem with extensive surface area across the globe (6.15 billion ha), have been suggested as a potential component for major carbon storage. A priori reasoning suggests that regional spatial patterns of SOC density (kg/m²) in Drylands are mostly affected by vegetation, soil texture, landscape position, soil truncation, wind erosion/deposition and the effect of water supply. Particularly unassigned is the interaction between soil volume, geomorphic processes and SOC density on regional scale. This study aims to enhance our understanding of regional spatial variability in dependence on soil volume, topography and surface parameters in areas susceptible to environmental change. Soil samples were taken in small transects at different representative slope positions across a range of elevations, soil texture, vegetation types, and terrain positions in a small catchment (600 ha) in the Negev desert. Topographic variables were extracted from a high resolution (0.5m) digital elevation model. Subsequently, we estimated the soil volume by excavating the entire soil at the representative sampling position. The volume was then estimated by laser scanning before and after soil excavation. SOC concentration of the soil samples was determined by CHN-analyser. For each sample, carbon densities (in kg/m²) were estimated for the mineral soil layer. The results indicate a large spatial variability of the carbon contents, the soil volume and depths across the landscape. In general, topography exerts a strong control on the carbon contents and the soil depths in the study site. Lowest carbon contents are apparent at the hillslope tops with increasing contents downslope. Because of the significantly larger carbon content at the northern exposed slope, we suggest that solar radiation driven differences of soil moisture content major controls SOC. Regarding the soil depths, the differences are not that clear. Soil depths seem to be higher at the southern exposed slope, but differences with respect to the slope position are not significant. Concerning the total amount of carbon storage in the study area, the results show that soil carbon may not be neglected in arid areas. Our results should provide an indication that carbon contents in dynamic environments are more affected and controlled by surface properties (soil volume) than by climate. Concluding that hint, climate is less important than surface processes in dryland ecosystems.

Modeling Soil Moisture in Support of the Revegetation of Military Lands in Arid Regions.

NASA Astrophysics Data System (ADS)

Caldwell, T. G.; McDonald, E. V.; Young, M. H.

2003-12-01

The National Training Center (NTC), the Army's primary mechanized maneuver training facility, covers approximately 2600 km2 within the Mojave Desert in southern California, and is the subject of ongoing studies to support the sustainability of military lands in desert environments. Revegetation of these lands by the Integrated Training Areas Management (ITAM) Program requires the identification of optimum growing conditions to reestablish desert vegetation from seed and seedling, especially with regard to the timing and abundance of plant-available water. Water content, soil water potential, and soil temperature were continuously monitored and used to calibrate the Simultaneous Heat And Water (SHAW) model at 3 re-seeded sites. Modeled irrigation scenarios were used to further evaluate the most effective volume, frequency, and timing of irrigation required to maximize revegetation success and minimize water use. Surface treatments including straw mulch, gravel mulch, soil tackifier and plastic sheet

Infrared Spectroscopic Analyses of Sulfate, Nitrate, and Carbonate-bearing Atacama Desert Soils: Analogs for the Interpretation of Infrared Spectra from the Martian Surface

NASA Technical Reports Server (NTRS)

Dalton, J. B.; Dalton, J. B.; Ewing, S. A.; Amundson, R.; McKay, C. P.

2005-01-01

The Atacama Desert of northern Chile is the driest desert on Earth, receiving only a few mm of rain per decade. The Mars climate may, in the past, have been punctuated by short-lived episodes of aqueous activity. The paleo-Martian environment may have had aqueous conditions similar to the current conditions that exist in the Atacama, and Mars soils may have formed with soil chemistry and mineralogy similar to those found in the Atacama. Remote and in-situ analysis of the Martian surface using infrared technology has a long heritage. Future investigations of the subsurface mineralogy are likely to build upon this heritage, and will benefit from real life lessons to be learned from terrestrial analog studies. To that end, preliminary results from a near- and mid-infrared spectroscopic study of Atacama soil profiled at a range of depths are presented.

Soil water storage and daily dynamics of typical ecosystems in Heihe Watershed, China

NASA Astrophysics Data System (ADS)

Huang, Y.

2017-12-01

Soil water plays a key role in terrestrial ecosystems by controlling exchange processes among soil, vegetation, and atmosphere. The spatiotemporal distribution and dynamics of soil water storage (SWS) may provide information on the exchange of soil moisture among landscapes and between groundwater and surface water. The Heihe River Watershed (HRW) is a typical inland river basin located in the arid region of Northwestern China. Based on the soil water data automatically recorded every 30 min in 18 sites during the Heihe Water Allied Telemetry Experimental Research, the soil water dynamic of six typical ecosystems, i.e., alpine meadow, mountain coniferous forest, mountain steppe, temperate desert, riparian forest, and cropland, were analyzed. The 2m-depth soil water storage of cropland in growing season was highest, followed by riparian forest, alpine meadow, mountain coniferous forest, and mountain steppe, and that of temperate desert was the lowest. For alpine meadow, mountain coniferous forest, and desert ecosystems, the seasonal fluctuation of soil water content was obvious in 0-100cm depth but not in 100-200cm depth. For mountain steppe, cropland, and riparian forest ecosystems, there were obviously seasonal fluctuation in soil water content in all 0-200cm depth. In addition, the frequency distributions of 30-min soil water contents of the six ecosystems were different greatly. Together with rainfall, the soil water content was greatly affected by irrigation and seasonal frozen.

Investigating the microbial community responsible for unusually high soil N2O and NOx emissions in the Colorado Desert

NASA Astrophysics Data System (ADS)

Eberwein, J. R.; Carey, C.; Aronson, E. L.; Jenerette, D.

2016-12-01

Although the importance of soil nitrogenous emissions are well accepted in terms of local and global ecological relevance, there remain considerable knowledge gaps concerning the mechanisms regulating production, particularly in arid systems. This study aimed to connect desert soil trace gas emissions of nitrous oxide (N2O) and nitrogen oxides (NOx) with compositional changes in the microbial community. We quantified real-time soil trace gas emissions at two sites in the Colorado Desert experiencing contrasting anthropogenic nitrogen (N) deposition loads (<5 and 15 kg N ha-1 y-1). Measurements were made through 48 hours following water (to simulate a 2 cm rain event) and N additions (at 30 kg NH4NO3 ha-1). In conjunction with flux measurements, soil samples were collected for 16S rRNA gene sequencing to characterize the soil microbial community. N2O fluxes reached as high as 1200 ng N2O-N m-2 s-1, well above most published emissions, but returned to pre-wetting conditions within 12 hours. NOx emissions reached as high as 350 ng NOx-N m-2 s-1 and remained elevated past 24 hours post-wetting. Results from the 16S analysis indicate distinct differences in the microbial community composition between the high and low N deposition sites, with less than 50% of operational taxonomic units (OTUs) in common between sites. N addition had a significant effect on the soil microbial community at the low deposition site, but not at the high deposition site. Furthermore, significant shifts in the bacterial community occurred after wetting, with only one third of the community remaining constant between time points. These results suggest that gaseous N export, particularly N2O emission, is a greater form of nitrogen loss in this system than is currently assumed. Experimental N additions and anthropogenic N deposition show potential for shifting soil microbial community composition, with implications for soil N emissions. Furthermore, shifts in the microbial community can occur as quickly as 15 minutes post-wetting, representing a remarkable ability for soil microorganisms to recover from extreme water stress. As aridlands cover approximately one third of the Earth's land surface, understanding the mechanisms that contribute to soil N emissions in these systems is of important global relevance.

Geometeorological data collected by the USGS Desert Winds Project at Desert Wells, Sonoran Desert, central-west Arizona, 1981 - 1996

USGS Publications Warehouse

Helm, Paula J.; Breed, Carol S.; Tigges, Richard; Creighton, Shawn

1998-01-01

The data in this report were obtained by instruments deployed on a GOES-satellite data collection station operated by the U.S. Geological Survey Desert Winds Project at Desert Wells (latitude 33° 42' 08" N, longitude 113° 48' 40" W), La Paz County, west-central Arizona. The elevation is 344 m (1,130 ft). From January 9, 1981 through May 31, 1995 the station recorded eight parameters: wind direction, wind speed, peak gust, air temperature, precipitation, humidity, barometric pressure, and soil temperature. On June 1, 1995, the station was upgraded by adding a SENSIT sand-flux sensor, which records grain impacts concurrently with wind speed and wind direction measurements. Included with the data is descriptive text on the geology, soils, climate, vegetation, and land use at the site, as well as text on data format, date retrieval software and instructions, and metadata

Streptomyces aridus sp. nov., isolated from a high altitude Atacama Desert soil and emended description of Streptomyces noboritoensis Isono et al. 1957

USDA-ARS?s Scientific Manuscript database

A polyphasic study was undertaken to determine the taxonomic status of a Streptomyces strain which had been isolated from a high altitude Atacama Desert soil and shown to have bioactive properties. The strain, isolate H9T, was found to have chemotaxonomic, cultural, and morphological properties that...

Streptomyces asenjonii sp. nov., isolated from arid Atacama Desert soils and emended description of Streptomyces viridosporus Pridham et al. 1958

USDA-ARS?s Scientific Manuscript database

A polyphasic study was undertaken to establish the taxonomic status of Streptomyces strains isolated from arid Atacama Desert soils. Analysis of the 16S rRNA gene sequences of the isolates showed that they formed a well-defined lineage that was loosely associated with the type strains of several Str...

Bacterial communities and the nitrogen cycle in the gypsum soils of Cuatro Ciénegas Basin, coahuila: a Mars analogue.

PubMed

López-Lozano, Nguyen E; Eguiarte, Luis E; Bonilla-Rosso, Germán; García-Oliva, Felipe; Martínez-Piedragil, Celeste; Rooks, Christine; Souza, Valeria

2012-07-01

The OMEGA/Mars Express hyperspectral imager identified gypsum at several sites on Mars in 2005. These minerals constitute a direct record of past aqueous activity and are important with regard to the search of extraterrestrial life. Gale Crater was chosen as Mars Science Laboratory Curiosity's landing site because it is rich in gypsum, as are some desert soils of the Cuatro Ciénegas Basin (CCB) (Chihuahuan Desert, Mexico). The gypsum of the CCB, which is overlain by minimal carbonate deposits, was the product of magmatic activity that occurred under the Tethys Sea. To examine this Mars analogue, we retrieved gypsum-rich soil samples from two contrasting sites with different humidity in the CCB. To characterize the site, we obtained nutrient data and analyzed the genes related to the N cycle (nifH, nirS, and nirK) and the bacterial community composition by using 16S rRNA clone libraries. As expected, the soil content for almost all measured forms of carbon, nitrogen, and phosphorus were higher at the more humid site than at the drier site. What was unexpected is the presence of a rich and divergent community at both sites, with higher taxonomic diversity at the humid site and almost no taxonomic overlap. Our results suggest that the gypsum-rich soils of the CCB host a unique microbial ecosystem that includes novel microbial assemblies.

Agronomic threshold of soil available phosphorus in grey desert soils in Xinjiang, China

NASA Astrophysics Data System (ADS)

Wang, B.; Liu, H.; Hao, X. Y.; Wang, X. H.; Sun, J. S.; Li, J. M.; Ma, Y. B.

2016-08-01

Based on 23 years of data, yields of maize, wheat and cotton were modelled under different fertilizer management practices and at different levels of available phosphorus (Olsen-P) in soil. Three types of threshold models were used, namely linear-linear (LL), linear- plateau (LP), and Mitscherlich type exponential (Exp). The agronomic thresholds of available phosphorus were 25.4 mgkg-1 for cotton, 14.8 mgkg-1 for wheat, 13.1 mgkg-1 for maize and 25.4 mgkg-1 for the grey desert soil regions of Xinjiang in China as a whole.

Calorimetric studies of cryptogamic crust metabolism in response to temperature, water vapor, and liquid water

Treesearch

Dorothy A. Stradling; Tonya Thygerson; Bruce N. Smith; Lee D. Hansen; Richard S. Criddle; Rosemary L. Pendleton

2001-01-01

Cryptogamic crusts are communities composed of lichens, cyanobacteria, algae, mosses, and fungi. These integrated soil crusts are susceptible to disturbance, but if intact, appear to play a role in providing nutrients, especially nitrogen, to higher plants. It is not known how or under what conditions desert crusts can grow. Crust samples from localities on the...

Diel hysteresis between soil respiration and soil temperature in a biological soil crust covered desert ecosystem

PubMed Central

Li, Xinrong; Zhang, Peng; Chen, Yongle

2018-01-01

Soil respiration induced by biological soil crusts (BSCs) is an important process in the carbon (C) cycle in arid and semi-arid ecosystems, where vascular plants are restricted by the harsh environment, particularly the limited soil moisture. However, the interaction between temperature and soil respiration remains uncertain because of the number of factors that control soil respiration, including temperature and soil moisture, especially in BSC-dominated areas. In this study, the soil respiration in moss-dominated crusts and lichen-dominated crusts was continuously measured using an automated soil respiration system over a one-year period from November 2015 to October 2016 in the Shapotou region of the Tengger Desert, northern China. The results indicated that over daily cycles, the half-hourly soil respiration rates in both types of BSC-covered areas were commonly related to the soil temperature. The observed diel hysteresis between the half-hourly soil respiration rates and soil temperature in the BSC-covered areas was limited by nonlinearity loops with semielliptical shapes, and soil temperature often peaked later than the half-hourly soil respiration rates in the BSC-covered areas. The average lag times between the half-hourly soil respiration rates and soil temperature for both types of BSC-covered areas were two hours over the diel cycles, and they were negatively and linearly related to the volumetric soil water content. Our results highlight the diel hysteresis phenomenon that occurs between soil respiration rates and soil temperatures in BSC-covered areas and the negative response of this phenomenon to soil moisture, which may influence total C budget evaluations. Therefore, the interactive effects of soil temperature and moisture on soil respiration in BSC-covered areas should be considered in global carbon cycle models of desert ecosystems. PMID:29624606

Overview about polluted sites management by mining activities in coastal-desertic zones

NASA Astrophysics Data System (ADS)

Reyes, Arturo; Letelier, María Victoria; Arenas, Franko; Cuevas, Jacqueline; Fuentes, Bárbara

2016-04-01

In Chile the main mining operations as well as artisanal and small-scale mining (copper, gold and silver) are located in desert areas. A large number of abandoned polluted sites with heavy metals and metalloids (Hg, Pb, Cu, Sb, As) remain in coastal areas close to human centers. The aim of this work was to identify the best remediation alternatives considering the physic-chemical characteristics of the coastal-desertic soils. The concentrations of above mentioned pollutants as well as soil properties were determined. The results showed variable concentration of the pollutants, highest detected values were: Hg (46.5 mg kg-1), Pb (84.7 mg kg-1), Cu (283.0 mg kg-1), Sb (90 mg kg-1), As (2,691 mg kg-1). The soils characteristic were: high alkalinity with pH: 7.75-9.66, high electric conductivity (EC: 1.94-118 mScm-1), sodium adsorption ratio (SAR: 5.07-8.22) and low permeability of the soils. Coastal-desertic sites are potential sources of pollution for population, and for terrestrial and marine ecosystems. Exposure routes of pollution for the population include: primary, by incidental ingestion and inhalation of soil and dust and secondary, by the ingestion of marine sediments, sea food and seawater. Rehabilitation of coastal-desertic sites, by using techniques like soil washing in situ, chemical stabilization, or phytostabilization, is conditioned by physic-chemical properties of the soils. In these cases the recommendation for an appropriate management, remediation and use of the sites includes: 1) physic chemical characterization of the soils, 2) evaluation of environmental risk, 3) education of the population and 3) application of a remediation technology according to soil characteristic and the planned use of the sites. Acknowledgments: Funding for this study was supported by the Regional Council of Antofagasta under Project Estudio de ingeniería para la remediación de sitios abandonados con potencial presencia de contaminantes identificados en la comuna de Taltal-BIP N°30320122-0, and by CICITEM Continuity Project N°R10C1004 funded by CONICYT and Antofagasta GORE.

Chemical weathering and diagenesis of a cold desert soil from Wright Valley, Antarctica - An analog of Martian weathering processes

NASA Technical Reports Server (NTRS)

Gibson, E. K.; Mckay, D. S.; Wentworth, S. J.

1983-01-01

Weathering, diagenesis, and chemical alteration of a soil profile from the Dry Valleys of Antarctica are investigated as an analog to soil development within the Martian regolith. Soil samples from a soil pit one meter deep on Prospect Mesa, Wright Valley, are examined for their major element concentrations, water-soluble cations and anions, carbon, sulfur, and water concentrations, and related petrographic characteristics of weathering in a cold, dry environment. A petrographic study of the samples suggests that most silicate mineral and lithic fragments exhibit some degree of alteration. Chemical alteration occurs both in samples above and within the permanently frozen zone. The concentrations of water-soluble cations, for example, Na(+), K(+), Ca(2+), and anions, Cl(-), SO4(2-), NO3(-), are found to decrease significantly from the surface to the permanently frozen zone, suggesting a major movement of water-soluble species. It is also found that enrichments in secondary mineral abundances correlate with the water soluble ion concentrations. The formation of zeolites is seen throughout the soil column; these, it is thought, may be reservoirs for volatile storage within the regolith.

Metagenomic sequence of saline desert microbiota from wild ass sanctuary, Little Rann of Kutch, Gujarat, India.

PubMed

Patel, Rajesh; Mevada, Vishal; Prajapati, Dhaval; Dudhagara, Pravin; Koringa, Prakash; Joshi, C G

2015-03-01

We report Metagenome from the saline desert soil sample of Little Rann of Kutch, Gujarat State, India. Metagenome consisted of 633,760 sequences with size 141,307,202 bp and 56% G + C content. Metagenome sequence data are available at EBI under EBI Metagenomics database with accession no. ERP005612. Community metagenomics revealed total 1802 species belonged to 43 different phyla with dominating Marinobacter (48.7%) and Halobacterium (4.6%) genus in bacterial and archaeal domain respectively. Remarkably, 18.2% sequences in a poorly characterized group and 4% gene for various stress responses along with versatile presence of commercial enzyme were evident in a functional metagenome analysis.

Aircraft and satellite remote sensing of desert soils and landscapes

NASA Technical Reports Server (NTRS)

Petersen, G. W.; Connors, K. F.; Miller, D. A.; Day, R. L.; Gardner, T. W.

1987-01-01

Remote sensing data on desert soils and landscapes, obtained by the Landsat TM, Heat Capacity Mapping Mission (HCMM), Simulated SPOT, and Thermal IR Multispectral Scanner (TIMS) aboard an aircraft, are discussed together with the analytical techniques used in the studies. The TM data for southwestern Nevada were used to discriminate among the alluvial fan deposits with different degrees of desert pavement and varnish, and different vegetation cover. Thermal-IR data acquired from the HCMM satellite were used to map the spatial distribution of diurnal surface temperatures and to estimate mean annual soil temperatures in central Utah. Simulated SPOT data for northwestern New Mexico identified geomorphic features, such as differences in eolian sand cover and fluvial incision, while the TIMS data depicted surface geologic features of the Saline Valley in California.

Estimation of saltation emission in the Kubuqi Desert, North China.

PubMed

Du, Heqiang; Xue, Xian; Wang, Tao

2014-05-01

The Kubuqi Desert suffered more severe wind erosion hazard. Every year, a mass of aeolian sand was blown in the Ten Tributaries that are tributaries of the Yellow River. To estimate the quantity of aeolian sediment blown into the Ten Tributaries from the Kubuqi Desert, it is necessary to simulate the saltation processes of the Kubuqi Desert. A saltation submodel of the IWEMS (Integrated Wind-Erosion Modeling System) and its accompanying RS (Remote Sensing) and GIS (Geographic Information System) methods were used to model saltation emissions in the Kubuqi Desert. To calibrate the saltation submodel, frontal area of vegetation, soil moisture, wind velocity and saltation sediment were observed synchronously on several points in 2011 and 2012. In this study, a model namely BEACH (Bridge Event And Continuous Hydrological) was introduced to simulate the daily soil moisture. Using the surface parameters (frontal area of vegetation and soil moisture) along with the observed wind velocities and saltation sediments for the observed points, the saltation model was calibrated and validated. To reduce the simulate error, a subdaily wind velocity program, WINDGEN was introduced in this model to simulate the hourly wind velocity of the Kubuqi Desert. By incorporating simulated hourly wind velocity, and model variables, the saltation emission of the Kubuqi Desert was modeled. The model results show that the total sediment flow rate was 1-30.99 tons/m over the last 10years (2001-2010). The saltation emission mainly occurs in the north central part of the Kubuqi Desert in winter and spring. Integrating the wind directions, the quantity of the aeolian sediment that deposits in the Ten Tributaries was estimated. Compared with the observed data by the local government and hydrometric stations, our estimation is reasonable. Copyright © 2014 Elsevier B.V. All rights reserved.

[Characteristics of soil microorganisms and soil nutrients in different sand-fixation shrub plantations in Kubuqi Desert, China].

PubMed

Zhang, Li-Xin; Duan, Yu Xi; Wang, Bo; Wang, Wei Feng; Li, Xiao Jing; Liu, Jin Jie

2017-12-01

Three types of sand-fixation shrub plantations, including Artemisia ordosica + Hedysarum fruticosum, Caragana korshinskii and Salix psammophila, were selected in the eastern area of Kubuqi Desert to study the changes in soil microbial biomass carbon (MBC) and microbial biomass nitrogen (MBN), quantities of soil microorganisms, contents of soil nutrients and the relations among these variables under the different plantation types and shifting sandy land. The restoration effects of each plantation type on soil quality were assessed by synthetic index method. The results showed that the contents of soil organic matter, total nitrogen and phosphorus, and available nitrogen and phosphorus under different plantations were all significantly greater than those under shifting sandy land, and the order of increase was A. ordosica + H. fruticosum ＞ C. korshinskii ＞ S. psammophila. The soil nutrient contents decreased with the increase of soil depth under all plantation types. The quantities of soil microorganisms and the contents of soil MBC and MBN under the plantations were higher at different degrees than those under shifting sandy land. MBC, MBN and the relative numbers of bacteria under A. ordosica+H. fruticosum plantation were higher than those under C. korshinskii plantation and S. psammophila plantation. The relative numbers of fungi and actinobacteria decreased in the order of C. korshinskii ＞ S. psammophila ＞ A. ordosica + H. fruticosum. The relative number of bacteria, MBC and MBN under the plantations were mainly affected by the contents of soil organic matter, total nitrogen, total phosphorus, available nitrogen, available phosphorus, as well as C/N, and the relative numbers of actinobacteria and fungi were primarily affected by the contents of soil total phosphorus, available nitrogen and available phosphorus. Soil quality was ranked in the order of A. ordosica + H. fruticosum ＞ C. korshinskii ＞ S. psammophila ＞ shifting sandy land. These results demonstrated that different sand-fixation shrub plantations could improve the quality of the desert soil and the A. ordosica + H. fruticosum plantation was the best for soil restoration and quality improvement in the desert.

Warming and increased precipitation frequency on the Colorado Plateau: Implications for biological soil crusts and soil processes

DOE Office of Scientific and Technical Information (OSTI.GOV)

Zelikova TJ; Hosman DC; Grote EE

2011-03-21

Frequent hydration and drying of soils in arid systems can accelerate desert carbon and nitrogen mobilization due to respiration, microbial death, and release of intracellular solutes. Because desert microinvertebrates can mediate nutrient cycling, and the autotrophic components of crusts are known to be sensitive to rapid desiccation due to elevated temperatures after wetting events, we studied whether altered soil temperature and frequency of summer precipitation can also affect the composition of food web consumer functional groups. We conducted a two-year field study with experimentally-elevated temperature and frequency of summer precipitation in the Colorado Plateau desert, measuring the change in abundancemore » of nematodes, protozoans, and microarthropods. We hypothesized that microfauna would be more adversely affected by the combination of elevated temperature and frequency of summer precipitation than either effect alone, as found previously for phototrophic crust biota. Microfauna experienced normal seasonal fluctuations in abundance, but the effect of elevated temperature and frequency of summer precipitation was statistically non-significant for most microfaunal groups, except amoebae. The seasonal increase in abundance of amoebae was reduced with combined elevated temperature and increased frequency of summer precipitation compared to either treatment alone, but comparable with control (untreated) plots. Based on our findings, we suggest that desert soil microfauna are relatively more tolerant to increases in ambient temperature and frequency of summer precipitation than the autotrophic components of biological soil crust at the surface.« less

Soil moisture and biogeochemical factors influence the distribution of annual Bromus species

USGS Publications Warehouse

Belnap, Jayne; Stark, John Thomas; Rau, Benjamin; Allen, Edith B.; Phillips, Sue

2016-01-01

Abiotic factors have a strong influence on where annual Bromus species are found. At the large regional scale, temperature and precipitation extremes determine the boundaries of Bromusoccurrence. At the more local scale, soil characteristics and climate influence distribution, cover, and performance. In hot, dry, summer-rainfall-dominated deserts (Sonoran, Chihuahuan), little or noBromus is found, likely due to timing or amount of soil moisture relative to Bromus phenology. In hot, winter-rainfall-dominated deserts (parts of the Mojave Desert), Bromus rubens is widespread and correlated with high phosphorus availability. It also responds positively to additions of nitrogen alone or with phosphorus. On the Colorado Plateau, with higher soil moisture availability, factors limiting Bromus tectorum populations vary with life stage: phosphorus and water limit germination, potassium and the potassium/magnesium ratio affect winter performance, and water and potassium/magnesium affect spring performance. Controlling nutrients also change with elevation. In cooler deserts with winter precipitation (Great Basin, Columbia Plateau) and thus even greater soil moisture availability, B. tectorum populations are controlled by nitrogen, phosphorus, or potassium. Experimental nitrogen additions stimulate Bromus performance. The reason for different nutrients limiting in dissimilar climatic regions is not known, but it is likely that site conditions such as soil texture (as it affects water and nutrient availability), organic matter, and/or chemistry interact in a manner that regulates nutrient availability and limitations. Under future drier, hotter conditions,Bromus distribution is likely to change due to changes in the interaction between moisture and nutrient availability.

The characteristics of phosphorus adsorption and desorption in gray desert soil of Xinjiang, China

NASA Astrophysics Data System (ADS)

Wang, B.; Sun, J. S.; Liu, H.; Ma, Y. B.

2017-07-01

The characteristics of phosphorus (P) adsorption and desorption in Xinjiang gray desert soil (0 - 200 mm) of China in the long-term fertilization condition is affected by the level of soil P content which studied through an isothermal adsorption and desorption experiments of P. The results stated that within the experimental concentration range, with the increase of the amount of outer-source phosphorus, P adsorption, desorption and desorption rate increased and adsorption rate decreased gradually in different Olsen-P levels of gray desert soil in Xinjiang, China. Olsen-P content is significantly correlated with the P adsorption saturation (DPS) of gray desert soil. The maximum adsorption capacity (Xm ) of the treatments followed an extremely significant decreasing order of CK>NPK≈NPKM>PK≈NPKS. The maximum buffer capacity (MBC) and adsorption constant (K) of the NPK treatment was much higher than NPKM, NPKS, PK and CK treatments. And, MBC value of CK treatment was extremely higher than NPKS and PK, however, the differences between NPKM and CK, NPKS and PK were not significant. The comparison between NPKM, NPKS, PK and CK treatments showed no significant difference in K value, but these four showed significantly lower than NPK treatments. The value of soil easy desorption P (RDP) of NPKS and NPKM was significantly higher than NPK and PK, and the chemical fertilizer with organic fertilizer was a best way to release the phosphorus for Xinjiang agricultural production, China.

Experimental and numerical investigations of soil water balance at the hinterland of the Badain Jaran Desert for groundwater recharge estimation

NASA Astrophysics Data System (ADS)

Hou, Lizhu; Wang, Xu-Sheng; Hu, Bill X.; Shang, Jie; Wan, Li

2016-09-01

Quantification of groundwater recharge from precipitation in the huge sand dunes is an issue in accounting for regional water balance in the Badain Jaran Desert (BJD) where about 100 lakes exist between dunes. In this study, field observations were conducted on a sand dune near a large saline lake in the BJD to investigate soil water movement through a thick vadose zone for groundwater estimation. The hydraulic properties of the soils at the site were determined using in situ experiments and laboratory measurements. A HYDRUS-1D model was built up for simulating the coupling processes of vertical water-vapor movement and heat transport in the desert soil. The model was well calibrated and validated using the site measurements of the soil water and temperature at various depths. Then, the model was applied to simulate the vertical flow across a 3-m-depth soil during a 53-year period under variable climate conditions. The simulated flow rate at the depth is an approximate estimation of groundwater recharge from the precipitation in the desert. It was found that the annual groundwater recharge would be 11-30 mm during 1983-2012, while the annual precipitation varied from 68 to 172 mm in the same period. The recharge rates are significantly higher than those estimated from the previous studies using chemical information. The modeling results highlight the role of the local precipitation as an essential source of groundwater in the BJD.

Desert grassland responses to climate and soil moisture suggest divergent vulnerabilities across the southwestern US

USGS Publications Warehouse

Gremer, Jennifer; Bradford, John B.; Munson, Seth M.; Duniway, Michael C.

2015-01-01

Climate change predictions include warming and drying trends, which are expected to be particularly pronounced in the southwestern United States. In this region, grassland dynamics are tightly linked to available moisture, yet it has proven difficult to resolve what aspects of climate drive vegetation change. In part, this is because it is unclear how heterogeneity in soils affects plant responses to climate. Here, we combine climate and soil properties with a mechanistic soil water model to explain temporal fluctuations in perennial grass cover, quantify where and the degree to which incorporating soil water dynamics enhances our ability to understand temporal patterns, and explore the potential consequences of climate change by assessing future trajectories of important climate and soil water variables. Our analyses focused on long-term (20 to 56 years) perennial grass dynamics across the Colorado Plateau, Sonoran, and Chihuahuan Desert regions. Our results suggest that climate variability has negative effects on grass cover, and that precipitation subsidies that extend growing seasons are beneficial. Soil water metrics, including the number of dry days and availability of water from deeper (>30 cm) soil layers, explained additional grass cover variability. While individual climate variables were ranked as more important in explaining grass cover, collectively soil water accounted for 40 to 60% of the total explained variance. Soil water conditions were more useful for understanding the responses of C3 than C4 grass species. Projections of water balance variables under climate change indicate that conditions that currently support perennial grasses will be less common in the future, and these altered conditions will be more pronounced in the Chihuahuan Desert and Colorado Plateau. We conclude that incorporating multiple aspects of climate and accounting for soil variability can improve our ability to understand patterns, identify areas of vulnerability, and predict the future of desert grasslands.

Desert grassland responses to climate and soil moisture suggest divergent vulnerabilities across the southwestern United States.

PubMed

Gremer, Jennifer R; Bradford, John B; Munson, Seth M; Duniway, Michael C

2015-11-01

Climate change predictions include warming and drying trends, which are expected to be particularly pronounced in the southwestern United States. In this region, grassland dynamics are tightly linked to available moisture, yet it has proven difficult to resolve what aspects of climate drive vegetation change. In part, this is because it is unclear how heterogeneity in soils affects plant responses to climate. Here, we combine climate and soil properties with a mechanistic soil water model to explain temporal fluctuations in perennial grass cover, quantify where and the degree to which incorporating soil water dynamics enhances our ability to understand temporal patterns, and explore the potential consequences of climate change by assessing future trajectories of important climate and soil water variables. Our analyses focused on long-term (20-56 years) perennial grass dynamics across the Colorado Plateau, Sonoran, and Chihuahuan Desert regions. Our results suggest that climate variability has negative effects on grass cover, and that precipitation subsidies that extend growing seasons are beneficial. Soil water metrics, including the number of dry days and availability of water from deeper (>30 cm) soil layers, explained additional grass cover variability. While individual climate variables were ranked as more important in explaining grass cover, collectively soil water accounted for 40-60% of the total explained variance. Soil water conditions were more useful for understanding the responses of C3 than C4 grass species. Projections of water balance variables under climate change indicate that conditions that currently support perennial grasses will be less common in the future, and these altered conditions will be more pronounced in the Chihuahuan Desert and Colorado Plateau. We conclude that incorporating multiple aspects of climate and accounting for soil variability can improve our ability to understand patterns, identify areas of vulnerability, and predict the future of desert grasslands. Published 2015. This article is a U.S. Government work and is in the public domain in the USA.

Simplified method for detecting tritium contamination in plants and soil

USGS Publications Warehouse

Andraski, Brian J.; Sandstrom, M.W.; Michel, R.L.; Radyk, J.C.; Stonestrom, David A.; Johnson, M.J.; Mayers, C.J.

2003-01-01

Cost-effective methods are needed to identify the presence and distribution of tritium near radioactive waste disposal and other contaminated sites. The objectives of this study were to (i) develop a simplified sample preparation method for determining tritium contamination in plants and (ii) determine if plant data could be used as an indicator of soil contamination. The method entailed collection and solar distillation of plant water from foliage, followed by filtration and adsorption of scintillation-interfering constituents on a graphite-based solid phase extraction (SPE) column. The method was evaluated using samples of creosote bush [Larrea tridentata (Sessé & Moc. ex DC.) Coville], an evergreen shrub, near a radioactive disposal area in the Mojave Desert. Laboratory tests showed that a 2-g SPE column was necessary and sufficient for accurate determination of known tritium concentrations in plant water. Comparisons of tritium concentrations in plant water determined with the solar distillation–SPE method and the standard (and more laborious) toluene-extraction method showed no significant difference between methods. Tritium concentrations in plant water and in water vapor of root-zone soil also showed no significant difference between methods. Thus, the solar distillation–SPE method provides a simple and cost-effective way to identify plant and soil contamination. The method is of sufficient accuracy to facilitate collection of plume-scale data and optimize placement of more sophisticated (and costly) monitoring equipment at contaminated sites. Although work to date has focused on one desert plant, the approach may be transferable to other species and environments after site-specific experiments.

Profile Changes in the Soil Microbial Community When Desert Becomes Oasis

PubMed Central

Li, Chen-hua; Tang, Li-song; Jia, Zhong-jun; Li, Yan

2015-01-01

The conversion of virgin desert into oasis farmland creates two contrasting types of land-cover. During oasis formation with irrigation and fertilizer application, however, the changes in the soil microbial population, which play critical roles in the ecosystem, remain poorly understood. We applied high-throughput pyrosequencing to investigate bacterial and archaeal communities throughout the profile (0–3 m) in an experimental field, where irrigation and fertilization began in 1990 and cropped with winter wheat since then. To assess the effects of cultivation, the following treatments were compared with the virgin desert: CK (no fertilizer), PK, NK, NP, NPK, NPKR, and NPKM (R: straw residue; M: manure fertilizer). Irrigation had a greater impact on the overall microbial community than fertilizer application. The greatest impact occurred in topsoil (0–0.2 m), e.g., Cyanobacteria (25% total abundance) were most abundant in desert soil, while Actinobacteria (26%) were most abundant in oasis soil. The proportions of extremophilic and photosynthetic groups (e.g., Deinococcus-Thermus and Cyanobacteria) decreased, while the proportions of R-strategy (e.g., Gammaproteobacteria including Xanthomonadales), nitrifying (e.g., Nitrospirae), and anaerobic bacteria (e.g., Anaerolineae) increased throughout the oasis profile. Archaea occurred only in oasis soil. The impact of fertilizer application was mainly reflected in the non-dominant communities or finer taxonomic divisions. Oasis formation led to a dramatic shift in microbial community and enhanced soil enzyme activities. The rapidly increased soil moisture and decreased salt caused by irrigation were responsible for this shift. Furthermore, difference in fertilization and crop growth altered the organic carbon contents in the soil, which resulted in differences of microbial communities within oasis. PMID:26426279

Modelling the Impact of Climate Change on Soil Water Availability and Plant Community Shifts in the Colorado Plateau

NASA Astrophysics Data System (ADS)

Thomas, A.; Gill, R. A.

2016-12-01

Climate change with an accompanying decrease in soil moisture is expected to have a significant impact on the sensitive, water-limited ecosystems of America's southwestern deserts. Already, studies have documented shifts in the distributions of competing grasses and shrubs in this region, potentially altering ecosystem function. Of particular interest is the loss of desert grasses and the expansion of desert shrubs over the past three decades. The objective of this work is to use a process-based hydrological model to extrapolate site-level measurements to assess trends in soil moisture availability that may impact plant communities in the Colorado Plateau and surrounding regions. The model, SOILWAT, simulates the daily movement of water through plant and soil layers, incorporating precipitation, interception, evaporation, infiltration between soil layers, and absorption and transpiration by plants, as well as physical site characteristics. We applied SOILWAT to 50 sites that were stratified through the northern, central, and southern regions of Ephedra viridis. We focused on E. viridis because it has displaced desert grasses in plot-scale studies. The model was driven using spatially interpolated daily weather data from the PRISM climate model over a 34-year period. We found that across all years, average soil water content in the sandy soil of the region was higher in soil layers 40-60 cm deep than in the top 20 cm, and highest in the deepest layers down to 100 cm. The consistently higher margin of water in deeper layers may indicate the vulnerability of shallow-rooted grass to increasing evaporation and an advantage to deeply-rooted shrubs such as Ephedra.

Soil surface disturbances in cold deserts: Effects on nitrogenase activity in cyanobacterial-lichen soil crusts

USGS Publications Warehouse

Belnap, Jayne

1996-01-01

CyanobacteriaMichen soil crusts can be a dominant source of nitrogen for cold-desert ecosystems. Effects of surface disturbance from footprints, bike and vehicle tracks on the nitrogenase activity in these crusts was investigated. Surface disturbances reduced nitrogenase activity by 30-100%. Crusts dominated by the cyanobacterium Microcoleus vaginatus on sandy soils were the most susceptible to disruption; crusts on gypsiferous soils were the least susceptible. Crusts where the soil lichen Collema tenax was present showed less immediate effects; however, nitrogenase activity still declined over time. Levels of nitrogenase activity reduction were affected by the degree of soil disruption and whether sites were dominated by cyanobacteria with or without heterocysts. Consequently, anthropogenic surface disturbances may have serious implications for nitrogen budgets in these ecosystems.

Micrometeorological, evapotranspiration, and soil-moisture data at the Amargosa Desert Research site in Nye County near Beatty, Nevada, 2006-11

USGS Publications Warehouse

Arthur, Jonathan M.; Johnson, Michael J.; Mayers, C. Justin; Andraski, Brian J.

2012-11-13

This report describes micrometeorological, evapotranspiration, and soil-moisture data collected since 2006 at the Amargosa Desert Research Site adjacent to a low-level radio-active waste and hazardous chemical waste facility near Beatty, Nevada. Micrometeorological data include precipitation, solar radiation, net radiation, air temperature, relative humidity, saturated and ambient vapor pressure, wind speed and direction, barometric pressure, near-surface soil temperature, soil-heat flux, and soil-water content. Evapotranspiration (ET) data include latent-heat flux, sensible-heat flux, net radiation, soil-heat flux, soil temperature, air temperature, vapor pressure, and other principal energy-budget data. Soil-moisture data include periodic measurements of volumetric water-content at experimental sites that represent vegetated native soil, devegetated native soil, and simulated waste disposal trenches - maximum measurement depths range from 5.25 to 29.25 meters. All data are compiled in electronic spreadsheets that are included with this report.

Desertification in 1957-2015 Estimated from Vegetation Coverage and Climate Conditions on the Tibetan Plateau

NASA Astrophysics Data System (ADS)

Cuo, L.

2017-12-01

Desert is an area that receives less than 25 cm precipitation in cold climate or 50 cm precipitation in hot climate (Miller, 1961). Others defined true desert as a region having no recorded precipitation in 12 consecutive months (McGinnies et al., 1968). According to Koppen-Gieger climate classification system, if mean annual precipitation is less than 50% of the value A calculated by mean annual temperature times 20 plus 280 if 70% or more precipitation falls in April-September, the region has desert climate; if the mean annual precipitation is within 50%-100% of the value A, the region has semi-arid or steppe climate. On the Tibetan Plateau, the above definitions will result in no desert at all or the majority of the region falling into the category of desert which is not consistent with reality based on field exploration. In this study, the fractional vegetation coverage (FPC), precipitation, soil moisture and extreme wind days are used as indices to define areas of various degrees of desertification which produces much more realistic distribution of desert areas on the plateau. The Lund-Potsdam-Jena Dynamic Vegetation model (LPJ) is used to simulate vegetation growth, succession and vegetation properties such as FPC and soil moisture on the Tibetan Plateau. Gridded daily climate data are generated to drive the model and to analyze the status and changes of various deserts including light desert, medium desert, severe desert, extremely severe desert and desert proned area. The study will reveal the status and changes of possible driving factors of desertification, as well as various kinds of desert on the Tibetan Plateau during 1957-2015.

Geomorphic control of radionuclide diffusion in desert soils

USGS Publications Warehouse

Pelletier, J.D.; Harrington, C.D.; Whitney, J.W.; Cline, M.; DeLong, S.B.; Keating, G.; Ebert, T.K.

2005-01-01

Diffusion is a standard model for the vertical migration of radionuclides in soil profiles. Here we show that diffusivity values inferred from fallout 137CS profiles in soils on the Fortymile Wash alluvial fan, Nye County, Nevada, have a strong inverse correlation with the age of the geomorphic surface. This result suggests that radionuclide-bound particles are predominantly transported by infiltration rather than by bulk-mixing processes such as wetting/ drying, freeze/thaw, and bioturbation. Our results provide a preliminary basis for using soil-geomorphic mapping, point-based calibration data, and the diffusion model to predict radionuclide trans desert soils within a pedotransfer-function approach. Copyright 2005 by the American Geophysical Union.

Sediment grain-size characteristics and relevant correlations to the aeolian environment in China's eastern desert region.

PubMed

Zhang, Chunlai; Shen, Yaping; Li, Qing; Jia, Wenru; Li, Jiao; Wang, Xuesong

2018-06-15

To identify characteristics of aeolian activity and the aeolian environment in China's eastern desert region, this study collected surface sediment samples from the main desert and sandy lands in this region: the Hobq Desert and the Mu Us, Otindag, Horqin, and Hulunbuir sandy lands. We analyzed the grain-size characteristics and their relationships to three key environmental indicators: drift potential, the dune mobility index, and vegetation cover. The main sediment components are fine to medium sands, with poor (Hulunbuir) to moderate (all other areas) sorting, of unimodal to bimodal distribution. This suggests that improved sorting is accomplished by the loss of both relatively coarser and finer grains. Since 2000, China's eastern desert region has generally experienced low wind energy environmental conditions, resulting in decreased dune activity. In the Hobq Desert, however, the dry climate and sparse vegetation, in conjunction with the most widely distributed mobile dune area in the eastern desert region, have led to frequent and intense aeolian activity, including wind erosion, sand transport, and deposition, resulting in conditions for good sediment sorting. In the Mu Us, Otindag, and Horqin sandy lands, mosaic distribution has resulted from wind erosion-dominated and deposition-dominated aeolian environments. In the Hulunbuir Sandy Land, high precipitation, low temperatures, and steppe vegetation have resulted in well-developed soils; however, strong winds and flat terrain have created an aeolian environment dominated by wind erosion. Copyright © 2018. Published by Elsevier B.V.

Effects of increased soil nitrogen on the dominance of alien annual plants in the Mojave Desert

USGS Publications Warehouse

Brooks, Matthew L.

2003-01-01

1. Deserts are one of the least invaded ecosystems by plants, possibly due to naturally low levels of soil nitrogen. Increased levels of soil nitrogen caused by atmospheric nitrogen deposition may increase the dominance of invasive alien plants and decrease the diversity of plant communities in desert regions, as it has in other ecosystems. Deserts should be particularly susceptible to even small increases in soil nitrogen levels because the ratio of increased nitrogen to plant biomass is higher compared with most other ecosystems.2. The hypothesis that increased soil nitrogen will lead to increased dominance by alien plants and decreased plant species diversity was tested in field experiments using nitrogen additions at three sites in the in the Mojave Desert of western North America.3. Responses of alien and native annual plants to soil nitrogen additions were measured in terms of density, biomass and species richness. Effects of nitrogen additions were evaluated during 2 years of contrasting rainfall and annual plant productivity. The rate of nitrogen addition was similar to published rates of atmospheric nitrogen deposition in urban areas adjacent to the Mojave Desert (3·2 g N m−2 year−1). The dominant alien species included the grasses Bromus madritensis ssp. rubens and Schismus spp. (S. arabicus and S. barbatus) and the forb Erodium cicutarium.4. Soil nitrogen addition increased the density and biomass of alien annual plants during both years, but decreased density, biomass and species richness of native species only during the year of highest annual plant productivity. The negative response of natives may have been due to increased competitive stress for soil water and other nutrients caused by the increased productivity of aliens.5. The effects of nitrogen additions were significant at both ends of a natural nutrient gradient, beneath creosote bush Larrea tridentata canopies and in the interspaces between them, although responses varied among individual alien species. The positive effects of nitrogen addition were highest in the beneath-canopy for B. rubens and in interspaces for Schismus spp. and E. cicutarium.6. The results indicated that increased levels of soil nitrogen from atmospheric nitrogen deposition or from other sources could increase the dominance of alien annual plants and possibly promote the invasion of new species in desert regions. Increased dominance by alien annuals may decrease the diversity of native annual plants, and increased biomass of alien annual grasses may also increase the frequency of fire.7. Although nitrogen deposition cannot be controlled by local land managers, the managers need to understand its potential effects on plant communities and ecosystem properties, in particular how these effects may interact with land-use activities that can be managed at the local scale. These interactions are currently unknown, and hinder the ability of managers to make appropriate land-use decisions related to nitrogen deposition in desert ecosystems.8. Synthesis and applications. The effects of nitrogen deposition on invasive alien plants should be considered when deciding where to locate new conservation areas, and in evaluating the full scope of ecological effects of new projects that would increase nitrogen deposition rates.

Draft Genome Sequence of Streptomyces sp. Strain Wb2n-11, a Desert Isolate with Broad-Spectrum Antagonism against Soilborne Phytopathogens

DOE PAGES

Köberl, Martina; White, Richard A.; Erschen, Sabine; ...

2015-08-06

Streptomyces sp. strain Wb2n-11, isolated from native desert soil, exhibited broad-spectrum antagonism against plant pathogenic fungi, bacteria, and nematodes. The 8.2-Mb draft genome reveals genes putatively responsible for its promising biocontrol activity and genes which enable the soil bacterium to directly interact beneficially with plants.

Interactions among climate and soil properties influence current and future geographic distribution of an invasive grass in the Chihuahuan Desert

USDA-ARS?s Scientific Manuscript database

Background/Question/Methods: Lehmann lovegrass (Eragrostis lehmanniana) is an invasive exotic perennial grass throughout the Sonoran Desert. However, in the neighboring Chihuahuan Desert, this species is generally present in low abundance, although data on its geographic distribution are scarce. Our...

Water use sources of desert riparian Populus euphratica forests.

PubMed

Si, Jianhua; Feng, Qi; Cao, Shengkui; Yu, Tengfei; Zhao, Chunyan

2014-09-01

Desert riparian forests are the main body of natural oases in the lower reaches of inland rivers; its growth and distribution are closely related to water use sources. However, how does the desert riparian forest obtains a stable water source and which water sources it uses to effectively avoid or overcome water stress to survive? This paper describes an analysis of the water sources, using the stable oxygen isotope technique and the linear mixed model of the isotopic values and of desert riparian Populus euphratica forests growing at sites with different groundwater depths and conditions. The results showed that the main water source of Populus euphratica changes from water in a single soil layer or groundwater to deep subsoil water and groundwater as the depth of groundwater increases. This appears to be an adaptive selection to arid and water-deficient conditions and is a primary reason for the long-term survival of P. euphratica in the desert riparian forest of an extremely arid region. Water contributions from the various soil layers and from groundwater differed and the desert riparian P. euphratica forests in different habitats had dissimilar water use strategies.

Surface disturbances: their role in accelerating desertification

USGS Publications Warehouse

Belnap, Jayne

1995-01-01

Maintaining soil stability and normal water and nutrient cycles in desert systems is critical to avoiding desertification. These particular ecosystem processes are threatened by trampling of livestock and people, and by off-road vehicle use. Soil compaction and disruption of cryptobiotic soil surfaces (composed of cyanobacteria, lichens, and mosses) can result in decreased water availability to vascular plants through decreased water infiltration and increased albedo with possible decreased precipitation. Surface disturbance may also cause accelerated soil loss through wind and water erosion and decreased diversity and abundance of soil biota. In addition, nutrient cycles can be altered through lowered nitrogen and carbon inputs and slowed decomposition of soil organic matter, resulting in lower nutrient levels in associated vascular plants. Some cold desert systems may be especially susceptible to these disruptions due to the paucity of surface-rooting vascular plants for soil stabilization, fewer nitrogen-fixing higher plants, and lower soil temperatures, which slow nutrient cycles. Desert soils may recover slowly from surface disturbances, resulting in increased vulnerability to desertification. Recovery from compaction and decreased soil stability is estimated to take several hundred years. Re-establishment rates for soil bacterial and fungal populations are not known. The nitrogen fixation capability of soil requires at least 50 years to recover. Recovery of crusts can be hampered by large amounts of moving sediment, and re-establishment can be extremely difficult in some areas. Given the sensitivity of these resources and slow recovery times, desertification threatens million of hectares of semiarid lands in the United States.

Ecological controls on water-cycle response to climate variability in deserts.

PubMed

Scanlon, B R; Levitt, D G; Reedy, R C; Keese, K E; Sully, M J

2005-04-26

The impact of climate variability on the water cycle in desert ecosystems is controlled by biospheric feedback at interannual to millennial timescales. This paper describes a unique field dataset from weighing lysimeters beneath nonvegetated and vegetated systems that unequivocally demonstrates the role of vegetation dynamics in controlling water cycle response to interannual climate variability related to El Nino southern oscillation in the Mojave Desert. Extreme El Nino winter precipitation (2.3-2.5 times normal) typical of the U.S. Southwest would be expected to increase groundwater recharge, which is critical for water resources in semiarid and arid regions. However, lysimeter data indicate that rapid increases in vegetation productivity in response to elevated winter precipitation reduced soil water storage to half of that in a nonvegetated lysimeter, thereby precluding deep drainage below the root zone that would otherwise result in groundwater recharge. Vegetation dynamics have been controlling the water cycle in interdrainage desert areas throughout the U.S. Southwest, maintaining dry soil conditions and upward soil water flow since the last glacial period (10,000-15,000 yr ago), as shown by soil water chloride accumulations. Although measurements are specific to the U.S. Southwest, correlations between satellite-based vegetation productivity and elevated precipitation related to El Nino southern oscillation indicate this model may be applicable to desert basins globally. Understanding the two-way coupling between vegetation dynamics and the water cycle is critical for predicting how climate variability influences hydrology and water resources in water-limited landscapes.

Living in Salt: The formation and development of extremophile habitats and biosignatures within salt crusts of the hyperarid Atacama Desert

NASA Astrophysics Data System (ADS)

Finstad, K. M.; Amundson, R.

2013-12-01

It has become increasing apparent that salt-rich deposits are present on the Martian surface and that aqueous alteration has occurred sometime during the planet's past. In the hyperarid Atacama Desert in Chile, an important Earth-based analogue to Mars, microbial life has been discovered inhabiting halite (NaCl) surface crust deposits. Is it possible that similar salt deposits on Mars once harbored microbial life? If so, what adaptations were likely necessary for survival in such an environment and what biosignatures are expected to remain? Although this fascinating ecosystem in the Atacama Desert has been recognized, neither the physical processes of halite crust formation, nor the microorganisms residing within the salts have been extensively studied. To better understand the formation and geochemical dynamics of this unique habitat, we chose two sites within the Atacama Desert which exhibit both active crust formation as well as the presence of microbial communities: one site is on a dry Holocene age lake bed, while the other is of Pleistocene age. At each site soil profiles were excavated and total geochemical analyses were performed. Field observations clearly showed that the soils exhibited transitions of carbonate to sulfate to chloride salt deposition with decreasing depth, and that the thickness and mass of halite in the surficial crust was related to the age of the soil. Isotope profiles of carbon, nitrogen, and sulfur from these soils were also analyzed. Once exposed to the atmosphere, the halite crusts reside in a dynamic state of dissolution and erosion by wind and fog, and reformation due to fog and dew. In the crust nodules, microbial communities were sampled, in centimeter increments from the surface, for carbon, nitrogen, and sulfur isotope/concentration profiles. Our analyses help elucidate the physical and geochemical processes linked to the formation and evolution of these dynamic salt crusts, and the imprint of microbial life within them. A detailed examination of this habitat provides guidelines for interpreting and understanding similar data from hyperarid environments, such as Mars, and planning for future Mars exploration.

Heterogeneity and loss of soil nutrient elements under aeolian processes in the Otindag Desert, China

NASA Astrophysics Data System (ADS)

Li, Danfeng; Wang, Xunming; Lou, Junpeng; Liu, Wenbin; Li, Hui; Ma, Wenyong; Jiao, Linlin

2018-02-01

The heterogeneity of the composition of surface soils that are affected by aeolian processes plays important roles in ecological evolution and the occurrence of aeolian desertification in fragile ecological zones, but the associated mechanisms are poorly understood. Using field investigation, wind tunnel experiments, and particle size and element analyses, we discuss the variation in the nutrient elements of surface soils that forms in the presence of aeolian processes of four vegetation species (Caragana microphylla Lam, Artemisia frigida Willd. Sp. Pl., Leymus chinensis (Trin.) Tzvel. and Stipa grandis P. Smirn) growing in the Otindag Desert, China. These four vegetation communities correspond to increasing degrees of degradation. A total of 40 macro elements, trace elements, and oxides were measured in the surface soil and in wind-transported samples. The results showed that under the different degradation stages, the compositions and concentrations of nutrients in surface soils differed for the four vegetation species. Aeolian processes may cause higher heterogeneity and higher loss of soil nutrient elements for the communities of Artemisia frigida Willd. Sp. Pl., Leymus chinensis (Trin.) Tzvel, and Stipa grandis P. Smirn than for the Caragana microphylla Lam community. There was remarkable variation in the loss of nutrients under different aeolian transportation processes. Over the past several decades, the highest loss of soil elements occurred in the 1970s, whereas the loss from 2011 to the present was generally 4.0% of that in the 1970s. These results indicate that the evident decrease in nutrient loss has played an important role in the rehabilitation that has occurred in the region recently.

Bioremediation of contaminated mixtures of desert mining soil and sawdust with fuel oil by aerated in-vessel composting in the Atacama Region (Chile).

PubMed

Godoy-Faúndez, Alex; Antizar-Ladislao, Blanca; Reyes-Bozo, Lorenzo; Camaño, Andrés; Sáez-Navarrete, César

2008-03-01

Since early 1900s, with the beginning of mining operations and especially in the last decade, small, although repetitive spills of fuel oil had occurred frequently in the Chilean mining desert industry during reparation and maintenance of machinery, as well as casual accidents. Normally, soils and sawdust had been used as cheap readily available sorbent materials of spills of fuel oil, consisting of complex mixtures of aliphatic and aromatic hydrocarbons. Chilean legislation considers these fuel oil contaminated mixtures of soil and sawdust as hazardous wastes, and thus they must be contained. It remains unknown whether it would be feasible to clean-up Chilean desert soils with high salinity and metal content, historically polluted with different commercial fuel oil, and contained during years. Thus, this study evaluated the feasibility of aerated in-vessel composting at a laboratory scale as a bioremediation technology to clean-up contaminated desert mining soils (fuel concentration>50,000 mg kg(-1)) and sawdust (fuel concentration>225,000 mg kg(-1)) in the Atacama Region. The composting reactors were operated using five soil to sawdust ratios (S:SD, 1:0, 3:1, 1:1, 1:3, 0:1, on a dry weight basis) under mesophilic temperatures (30-40 degrees C), constant moisture content (MC, 50%) and continuous aeration (16 l min(-1)) during 56 days. Fuel oil concentration and physico-chemical changes in the composting reactors were monitored following standard procedures. The highest (59%) and the lowest (35%) contaminant removals were observed in the contaminated sawdust and contaminated soil reactors after 56 days of treatment, respectively. The S:SD ratio, time of treatment and interaction between both factors had a significant effect (p<0.050) on the contaminant removal. The results of this research indicate that bioremediation of an aged contaminated mixture of desert mining soil and sawdust with fuel oil is feasible. This study recommends a S:SD ratio 1:3 and a correct nutrient balance in order to achieve a maximum overall hydrocarbon removal of fuel oil in the weathered and aged contaminated wastes.

The lasting effects of tank maneuvers on desert soils and intershrub flora

USGS Publications Warehouse

Prose, Douglas V.; Wilshire, Howard G.

2000-01-01

Mojave Desert soils and intershrub flora sustained lasting disturbances during military training maneuvers initiated by General George Patton, Jr. in the 1940s, and during Operation Desert Strike in 1964. At six sites, mean desert pavement clast size was significantly smaller by 15% to 50% in single tank tracks compared to undisturbed surfaces. The finer-grained tracks yielded significantly higher surface reflectance values at two of three sites. At one site, Patton era tank tracks cross centuries-old "intaglios" and there was no significant difference in clast size between the disturbances. Full recovery of pavement surfaces may require a change in climate since pavements formed in Pleistocene times under climatic conditions that no longer exist. Tank tracks of both ages exhibited significant levels of soil compaction, as indicated by penetrometer resistance values that were 51% to 120% greater than those in undisturbed soils to 0.3 m depth. Soil bulk density in tracks was 4% to 6% higher than in undisturbed soils. Soil compaction lowered infiltration rates in tank tracks by 24% to 55% in comparison to undisturbed soils. Compaction has prevented the intershrub flora from recovering in tank tracks. Annual and herbaceous perennial plant density was higher by 13% to 56% in tank tracks than in undisturbed soils, but compaction has restricted the growth of individual plants. This was reflected in plant cover values, which were 3% to 16% lower in tank tracks than in undisturbed soils. Soil compaction also altered the species composition. Species with long taproots, such as Chaenactis fremontii, were reduced in density and cover in tank tracks, whereas grass species with shallow, fibrous root systems had large density increases in tracks. Another important element of the intershrub flora, cryptobiotic crust, exhibited a low rate of recovery from the impact of tank travel at one site. The cover of the most well-developed component of the crusts, growing on delicate soil pedicels in undisturbed soils, was reduced by 50% in tank tracks because of destruction and compaction of the uppermost soil layers.

The structural-functional organization of thermotolerant complexes of actinomycetes in desert and volcanic soils

NASA Astrophysics Data System (ADS)

Zenova, G. M.; Kurapova, A. I.; Lysenko, A. M.; Zvyagintsev, D. G.

2009-05-01

It has been found that the number of thermotolerant actinomycetes in strongly heated soils of deserts and volcanic regions is comparable to or exceeds the number of mesophilic actinomycetes. Among the latter group, streptomyces usually predominate; among thermotolerant actinomycetes, representatives of the Micromonospora, Streptosporangium, Actinomadura, Saccharopolyspora, Microtetraspora, and Microbispora genera are identified. Thermotolerant actinomycetes display the full cycle of their development in these soils. The method of fluorescent in situ hybridization has made it possible to determine that mycelial forms predominate among the metabolically active representatives of Actinobacteria; their portion increases with the rise in the temperature of soil incubation.

Soil microbial and nutrient responses to 7 years of seasonally altered precipitation in a Chihuahuan Desert grassland.

PubMed

Bell, Colin W; Tissue, David T; Loik, Michael E; Wallenstein, Matthew D; Acosta-Martinez, Veronica; Erickson, Richard A; Zak, John C

2014-05-01

Soil microbial communities in Chihuahuan Desert grasslands generally experience highly variable spatiotemporal rainfall patterns. Changes in precipitation regimes can affect belowground ecosystem processes such as decomposition and nutrient cycling by altering soil microbial community structure and function. The objective of this study was to determine if increased seasonal precipitation frequency and magnitude over a 7-year period would generate a persistent shift in microbial community characteristics and soil nutrient availability. We supplemented natural rainfall with large events (one/winter and three/summer) to simulate increased precipitation based on climate model predictions for this region. We observed a 2-year delay in microbial responses to supplemental precipitation treatments. In years 3-5, higher microbial biomass, arbuscular mycorrhizae abundance, and soil enzyme C and P acquisition activities were observed in the supplemental water plots even during extended drought periods. In years 5-7, available soil P was consistently lower in the watered plots compared to control plots. Shifts in soil P corresponded to higher fungal abundances, microbial C utilization activity, and soil pH. This study demonstrated that 25% shifts in seasonal rainfall can significantly influence soil microbial and nutrient properties, which in turn may have long-term effects on nutrient cycling and plant P uptake in this desert grassland. © 2013 John Wiley & Sons Ltd.

A reservoir of nitrate beneath desert soils.

PubMed

Walvoord, Michelle A; Phillips, Fred M; Stonestrom, David A; Evans, R Dave; Hartsough, Peter C; Newman, Brent D; Striegl, Robert G

2003-11-07

A large reservoir of bioavailable nitrogen (up to approximately 10(4) kilograms of nitrogen per hectare, as nitrate) has been previously overlooked in studies of global nitrogen distribution. The reservoir has been accumulating in subsoil zones of arid regions throughout the Holocene. Consideration of the subsoil reservoir raises estimates of vadose-zone nitrogen inventories by 14 to 71% for warm deserts and arid shrublands worldwide and by 3 to 16% globally. Subsoil nitrate accumulation indicates long-term leaching from desert soils, impelling further evaluation of nutrient dynamics in xeric ecosystems. Evidence that subsoil accumulations are readily mobilized raises concern about groundwater contamination after land-use or climate change.

A reservoir of nitrate beneath desert soils

USGS Publications Warehouse

Walvoord, Michelle Ann; Phillips, Fred M.; Stonestrom, David A.; Evans, R. Dave; Hartsough, Peter C.; Newman, Brent D.; Striegl, Robert G.

2003-01-01

A large reservoir of bioavailable nitrogen (up to ∼104 kilograms of nitrogen per hectare, as nitrate) has been previously overlooked in studies of global nitrogen distribution. The reservoir has been accumulating in subsoil zones of arid regions throughout the Holocene. Consideration of the subsoil reservoir raises estimates of vadose-zone nitrogen inventories by 14 to 71% for warm deserts and arid shrublands worldwide and by 3 to 16% globally. Subsoil nitrate accumulation indicates long-term leaching from desert soils, impelling further evaluation of nutrient dynamics in xeric ecosystems. Evidence that subsoil accumulations are readily mobilized raises concern about groundwater contamination after land-use or climate change.

Namib Desert primary productivity is driven by cryptic microbial community N-fixation.

PubMed

Ramond, Jean-Baptiste; Woodborne, Stephan; Hall, Grant; Seely, Mary; Cowan, Don A

2018-05-02

Carbon exchange in drylands is typically low, but during significant rainfall events (wet anomalies) drylands act as a C sink. During these anomalies the limitation on C uptake switches from water to nitrogen. In the Namib Desert of southern Africa, the N inventory in soil organic matter available for mineralisation is insufficient to support the observed increase in primary productivity. The C4 grasses that flourish after rainfall events are not capable of N fixation, and so there is no clear mechanism for adequate N fixation in dryland ecosystems to support rapid C uptake. Here we demonstrate that N fixation by photoautotrophic hypolithic communities forms the basis for the N budget for plant productivity events in the Namib Desert. Stable N isotope (δ 15 N) values of Namib Desert hypolithic biomass, and surface and subsurface soils were measured over 3 years across dune and gravel plain biotopes. Hypoliths showed significantly higher biomass and lower δ 15 N values than soil organic matter. The δ 15 N values of hypoliths approach the theoretical values for nitrogen fixation. Our results are strongly indicative that hypolithic communities are the foundation of productivity after rain events in the Namib Desert and are likely to play similar roles in other arid environments.

Effect of desertification on productivity in a desert steppe.

PubMed

Tang, Zhuangsheng; An, Hui; Deng, Lei; Wang, Yingying; Zhu, Guangyu; Shangguan, Zhouping

2016-06-14

Desertification, one of the most severe types of land degradation in the world, is of great importance because it is occurring, to some degree, on approximately 40% of the global land area and is affecting more than 1 billion people. In this study, we used a space-for-time method to quantify the impact of five different desertification regimes (potential (PD), light (LD), moderate (MD), severe (SD), and very severe (VSD)) on a desert steppe ecosystem in northern China to examine the relationship between the productivity of the vegetation and soil properties and to determine the mechanism underlying the effects of desertification on productivity. Our results showed that the effects of desertification on TP (total phosphorus) and AP (available phosphorus) were not significant, and desertification decreased productivity in the desert steppe as a result of direct changes to soil physical properties, which can directly affect soil chemical properties. Therefore, intensive grassland management to improve soil quality may result in the long-term preservation of ecosystem functions and services.

Effect of desertification on productivity in a desert steppe

PubMed Central

Tang, Zhuangsheng; An, Hui; Deng, Lei; Wang, Yingying; Zhu, Guangyu; Shangguan, Zhouping

2016-01-01

Desertification, one of the most severe types of land degradation in the world, is of great importance because it is occurring, to some degree, on approximately 40% of the global land area and is affecting more than 1 billion people. In this study, we used a space-for-time method to quantify the impact of five different desertification regimes (potential (PD), light (LD), moderate (MD), severe (SD), and very severe (VSD)) on a desert steppe ecosystem in northern China to examine the relationship between the productivity of the vegetation and soil properties and to determine the mechanism underlying the effects of desertification on productivity. Our results showed that the effects of desertification on TP (total phosphorus) and AP (available phosphorus) were not significant, and desertification decreased productivity in the desert steppe as a result of direct changes to soil physical properties, which can directly affect soil chemical properties. Therefore, intensive grassland management to improve soil quality may result in the long-term preservation of ecosystem functions and services. PMID:27297202

[Spatial heterogeneity of soil salinization and its influencing factors in the typical region of the Mu Us Desert-Loess Plateau transitional zone, Northwest China].

PubMed

Zhao, Xuan; Hao, Qi Li; Sun, Ying Ying

2017-06-18

Studies on the spatial heterogeneity of saline soil in the Mu Us Desert-Loess Plateau transition zone are meaningful for understanding the mechanisms of land desertification. Taking the Mu Us Desert-Loess Plateau transition zone as the study subject, its spatial heterogeneity of pH, electrical conductivity (EC) and total salt content were analyzed by using on-site sampling followed with indoor analysis, classical statistical and geostatistical analysis. The results indicated that: 1) The average values of pH, EC and total salt content were 8.44, 5.13 mS·cm -1 and 21.66 g·kg -1 , respectively, and the coefficient of variation ranged from 6.9% to 73.3%. The pH was weakly variable, while EC and total salt content were moderately variable. 2) Results of semivariogram analysis showed that the most fitting model for spatial variability of all three indexes was spherical model. The C 0 /(C 0 +C) ratios of three indexes ranged from 8.6% to 14.3%, which suggested the spatial variability of all indexes had a strong spatial autocorrelation, and the structural factors played a more important role. The variation range decreased in order of pH

Source apportionment of PM₁₀ and PM₂.₅ in a desert region in northern Chile.

PubMed

Jorquera, Héctor; Barraza, Francisco

2013-02-01

Estimating contributions of anthropogenic sources to ambient particulate matter (PM) in desert regions is a challenging issue because wind erosion contributions are ubiquitous, significant and difficult to quantify by using source-oriented, dispersion models. A receptor modeling analysis has been applied to ambient PM(10) and PM(2.5) measured in an industrial zone ~20 km SE of Antofagasta (23.63°S, 70.39°W), a midsize coastal city in northern Chile; the monitoring site is within a desert region that extends from northern Chile to southern Perú. Integrated 24-hour ambient samples of PM(10) and PM(2.5) were taken with Harvard Impactors; samples were analyzed by X Ray Fluorescence, ionic chromatography (NO(3)(-) and SO(4)(=)), atomic absorption (Na(+), K(+)) and thermal optical transmission for elemental and organic carbon determination. Receptor modeling was carried out using Positive Matrix Factorization (US EPA Version 3.0); sources were identified by looking at specific tracers, tracer ratios, local winds and wind trajectories computed from NOAA's HYSPLIT model. For the PM(2.5) fraction, six contributions were found - cement plant, 33.7 ± 1.3%; soil dust, 22.4 ± 1.6%; sulfates, 17.8 ± 1.7%; mineral stockpiles and brine plant, 12.4 ± 1.2%; Antofagasta, 8.5 ± 1.3% and copper smelter, 5.3 ± 0.8%. For the PM(10) fraction five sources were identified - cement plant, 38.2 ± 1.5%; soil dust, 31.2 ± 2.3%; mineral stockpiles and brine plant, 12.7 ± 1.7%; copper smelter, 11.5 ± 1.6% and marine aerosol, 6.5 ± 2.4%. Therefore local sources contribute to ambient PM concentrations more than distant sources (Antofagasta, marine aerosol) do. Soil dust is enriched with deposition of marine aerosol and calcium, sulfates and heavy metals from surrounding industrial activities. The mean contribution of suspended soil dust to PM(10) is 50 μg/m(3) and the peak daily value is 104 μg/m(3). For the PM(2.5) fraction, suspended soil dust contributes with an average of 9.3 μg/m(3) and a peak daily value of 31.5 μg/m(3). Copyright © 2012 Elsevier B.V. All rights reserved.

High Resolution Mapping of Soils and Landforms for the Desert Renewable Energy Conservation Plan (DRECP)

NASA Technical Reports Server (NTRS)

Potter, Christopher S.; Li, Shuang

2014-01-01

The Desert Renewable Energy Conservation Plan (DRECP), a major component of California's renewable energy planning efforts, is intended to provide effective protection and conservation of desert ecosystems, while allowing for the sensible development of renewable energy projects. This NASA mapping report was developed to support the DRECP and the Bureau of Land Management (BLM). We outline in this document remote sensing image processing methods to deliver new maps of biological soils crusts, sand dune movements, desert pavements, and sub-surface water sources across the DRECP area. We focused data processing first on the largely unmapped areas most likely to be used for energy developments, such as those within Renewable Energy Study Areas (RESA) and Solar Energy Zones (SEZs). We used imagery (multispectral and radar) mainly from the years 2009-2011.

Contrasting diel hysteresis between soil autotrophic and heterotrophic respiration in a desert ecosystem under different rainfall scenarios

PubMed Central

Song, Weimin; Chen, Shiping; Zhou, Yadan; Wu, Bo; Zhu, Yajuan; Lu, Qi; Lin, Guanghui

2015-01-01

Diel hysteresis occurs often between soil CO2 efflux (RS) and temperature, yet, little is known if diel hysteresis occurs in the two components of RS, i.e., autotrophic respiration (RA) and heterotrophic respiration (RH), and how diel hysteresis will respond to future rainfall change. We conducted a field experiment in a desert ecosystem in northern China simulating five different scenarios of future rain regimes. Diel variations of soil CO2 efflux and soil temperature were measured on Day 6 and Day 16 following the rain addition treatments each month during the growing season. We found contrasting responses in the diel hysteresis of RA and RH to soil temperature, with a clockwise hysteresis loop for RH but a counter-clockwise hysteresis loop for RA. Rain addition significantly increased the magnitude of diel hysteresis for both RH and RA on Day 6, but had no influence on either on Day 16 when soil moisture was much lower. These findings underline the different roles of biological (i.e. plant and microbial activities) and physical-chemical (e.g. heat transport and inorganic CO2 exchange) processes in regulating the diel hysteresis of RA and RH, which should be considered when estimating soil CO2 efflux in desert regions under future rainfall regime. PMID:26615895

Spatial distribution of soil organic carbon and its influencing factors in desert grasslands of the Hexi Corridor, northwest China.

PubMed

Wang, Min; Su, Yongzhong; Yang, Xiao

2014-01-01

Knowledge of the distribution patterns of soil organic carbon (SOC) and factors that influence these patterns is crucial for understanding the carbon cycle. The objectives of this study were to determine the spatial distribution pattern of soil organic carbon density (SOCD) and the controlling factors in arid desert grasslands of northwest China. The above- and belowground biomass and SOCD in 260 soil profiles from 52 sites over 2.7×10(4) km2 were investigated. Combined with a satellite-based dataset of an enhanced vegetation index during 2011-2012 and climatic factors at different sites, the relationships between SOCD and biotic and abiotic factors were identified. The results indicated that the mean SOCD was 1.20 (SD:+/- 0.85), 1.73 (SD:+/- 1.20), and 2.69 (SD:+/- 1.91) kg m(-2) at soil depths of 0-30 cm, 0-50 cm, and 0-100 cm, respectively, which was smaller than other estimates in temperate grassland, steppe, and desert-grassland ecosystems. The spatial distribution of SOCD gradually decreased from the southeast to the northwest, corresponding to the precipitation gradient. SOCD increased significantly with vegetation biomass, annual precipitation, soil moisture, clay and silt content, and decreased with mean annual temperature and sand content. The correlation between BGB and SOCD was closer than the correlation between AGB and SOCD. Variables could together explain about 69.8%, 74.4%, and 78.9% of total variation in SOCD at 0-30 cm, 0-50 cm, and 0-100 cm, respectively. In addition, we found that mean annual temperature is more important than other abiotic factors in determining SOCD in arid desert grasslands in our study area. The information obtained in this study provides a basis for accurately estimating SOC stocks and assessing carbon (C) sequestration potential in the desert grasslands of northwest China.

Plant Mounds as Concentration and Stabilization Agents for Actinide Soil Contaminants in Nevada

DOE Office of Scientific and Technical Information (OSTI.GOV)

D.S. Shafer; J. Gommes

Plant mounds or blow-sand mounds are accumulations of soil particles and plant debris around the base of shrubs and are common features in deserts in the southwestern United States. An important factor in their formation is that shrubs create surface roughness that causes wind-suspended particles to be deposited and resist further suspension. Shrub mounds occur in some plant communities on the Nevada Test Site, the Nevada Test and Training Range (NTTR), and Tonopah Test Range (TTR), including areas of surface soil contamination from past nuclear testing. In the 1970s as part of early studies to understand properties of actinides inmore » the environment, the Nevada Applied Ecology Group (NAEG) examined the accumulation of isotopes of Pu, 241Am, and U in plant mounds at safety experiment and storage-transportation test sites of nuclear devices. Although aerial concentrations of these contaminants were highest in the intershrub or desert pavement areas, the concentration in mounds were higher than in equal volumes of intershrub or desert pavement soil. The NAEG studies found the ratio of contaminant concentration of actinides in soil to be greater (1.6 to 2.0) in shrub mounds than in the surrounding areas of desert pavement. At Project 57 on the NTTR, 17 percent of the area was covered in mounds while at Clean Slate III on the TTR, 32 percent of the area was covered in mounds. If equivalent volumes of contaminated soil were compared between mounds and desert pavement areas at these sites, then the former might contain as much as 34 and 62 percent of the contaminant inventory, respectively. Not accounting for radionuclides associated with shrub mounds would cause the inventory of contaminants and potential exposure to be underestimated. In addition, preservation of shrub mounds could be important part of long-term stewardship if these sites are closed by fencing and posting with administrative controls.« less

Polyphasic characterization of Trichocoleus desertorum sp. nov. (Pseudanabaenales, Cyanobacteria) from desert soils and phylogenetic placement of the genus Trichocoleus

Treesearch

Radka Muhlsteinova; Jeffrey R. Johansen; Nicole Pietrasiak; Michael P. Martin; Karina Osorio-Santos; Steven D. Warren

2014-01-01

Little is known about the taxonomic diversity of cyanobacteria in deserts, despite their important ecological roles in these ecosystems. In this study, cyanobacterial strains from the Atacama, Colorado, and Mojave Deserts were isolated and characterized using molecular, morphological, and ecological information. Phylogenetic placement of these strains was revealed...

Sulfate and nitrate in Asian dust particles observed in desert, coastal and marine air

NASA Astrophysics Data System (ADS)

Zhang, D.; Wu, F.; Junji, C.

2016-12-01

Sulfate and nitrate in dust particles are believed to be two key species which can largely alter the physical and chemical properties of the particles in the atmosphere, in particular under humid conditions. Their occurrence in the particles has usually been considered to be the consequence of particles' aging during their long-distance travel in the air although they are present in some crustal minerals. Our observations at two deserts in China during dust episodes revealed that there were soil-derived sulfate and background-like nitrate in atmospheric dust samples. Sulfate in dust samples was proportional to samples' mass and comprised at steady mass percentages in differently sized samples. In contrast, nitrate concentration was approximately stable and independent from dust loading. Our observations at inland and coastal areas of China during dust episodes revealed that sulfate and nitrate were hardly produced on the surface of dust particles that were originated from the deserts areas in northwestern China. This is because the dust particles were in the postfrontal air, where the temperature was low and the relative humidity was small due to the adiabatic properties of the air mass. There are a number studies reporting that sulfate and nitrate had been efficiently produced on mineral particles in inland areas of China. However, those mineral particles were more likely from the local areas rather than from the desert areas. Our observations in the coastal areas of Japan, which is located in the downstream areas of the Asian continent and surrounded by sea areas revealed that dust particles appearing there frequently contained sulfate and nitrate, indicating sulfate and nitrate had been efficiently produced on the surface of the particles when the particles traveled in the marine air between China and Japan.

Limited production of sulfate and nitrate on front-associated dust storm particles moving from desert to distant populated areas in northwestern China

NASA Astrophysics Data System (ADS)

Wu, Feng; Zhang, Daizhou; Cao, Junji; Guo, Xiao; Xia, Yao; Zhang, Ting; Lu, Hui; Cheng, Yan

2017-12-01

Sulfate and nitrate compounds can greatly increase the hygroscopicity of mineral particles in the atmosphere and consequently alter the particles' physical and chemical properties. Their uptake on long-distance-transported Asian dust particles within mainland China has been reported to be substantial in previous studies, but the production was very inefficient in other studies. We compared these two salts in particles collected from a synoptic-scale, mid-latitude, cyclone-induced dust storm plume at the Tengger Desert (38.79° N, 105.38° E) and in particles collected in a postfrontal dust plume at an urban site in Xi'an (34.22° N, 108.87° E) when a front-associated dust storm from the Tengger Desert arrived there approximately 700 km downwind. The results showed that the sulfate concentration was not considerably different at the two sites, while the nitrate concentration was slightly larger at the urban site than that at the desert site. The estimated nitrate production rate was 4-5 ng µg-1 of mineral dust per day, which was much less than that in polluted urban air. The adiabatic process of the dust-loading air was suggested to be the reason for the absence of sulfate formation, and the uptake of background HNO3 was suggested to be the reason for the small nitrate production. According to our investigation of the published literature, the significant sulfate and nitrate in dust-storm-associated samples within the continental atmosphere reported in previous studies cannot be confirmed as actually produced on desert dust particles; the contribution from locally emitted and urban mineral particles or from soil-derived sulfate was likely substantial because the weather conditions in those studies indicated that the collection of the samples was started before dust arrival, or the air from which the samples were collected was a mixture of desert dust and locally emitted mineral particles. These results suggest that the production of nitrate and sulfate on dust particles following cold fronts is likely limited when the particles move from the desert to populated areas within the continent. For an accurate quantification of sulfate and nitrate formed on long-distance-transported desert dust particles at downwind populated areas in eastern China, dust collection efforts are indispensable to minimize any possible influence by locally emitted particles or at least to ensure that the samples are collected after dust arrival.

Bacterial polyextremotolerant bioemulsifiers from arid soils improve water retention capacity and humidity uptake in sandy soil.

PubMed

Raddadi, Noura; Giacomucci, Lucia; Marasco, Ramona; Daffonchio, Daniele; Cherif, Ameur; Fava, Fabio

2018-05-31

Water stress is a critical issue for plant growth in arid sandy soils. Here, we aimed to select bacteria producing polyextremotolerant surface-active compounds capable of improving water retention and humidity uptake in sandy soils. From Tunisian desert and saline systems, we selected eleven isolates able to highly emulsify different organic solvents. The bioemulsifying activities were stable with 30% NaCl, at 4 and 120 °C and in a pH range 4-12. Applications to a sandy soil of the partially purified surface-active compounds improved soil water retention up to 314.3% compared to untreated soil. Similarly, after 36 h of incubation, the humidity uptake rate of treated sandy soil was up to 607.7% higher than untreated controls. Overall, results revealed that polyextremotolerant bioemulsifiers of bacteria from arid and desert soils represent potential sources to develop new natural soil-wetting agents for improving water retention in arid soils.

EDTA addition enhances bacterial respiration activities and hydrocarbon degradation in bioaugmented and non-bioaugmented oil-contaminated desert soils.

PubMed

Al Kharusi, Samiha; Abed, Raeid M M; Dobretsov, Sergey

2016-03-01

The low number and activity of hydrocarbon-degrading bacteria and the low solubility and availability of hydrocarbons hamper bioremediation of oil-contaminated soils in arid deserts, thus bioremediation treatments that circumvent these limitations are required. We tested the effect of Ethylenediaminetetraacetic acid (EDTA) addition, at different concentrations (i.e. 0.1, 1 and 10 mM), on bacterial respiration and biodegradation of Arabian light oil in bioaugmented (i.e. with the addition of exogenous alkane-degrading consortium) and non-bioaugmented oil-contaminated desert soils. Post-treatment shifts in the soils' bacterial community structure were monitored using MiSeq sequencing. Bacterial respiration, indicated by the amount of evolved CO2, was highest at 10 mM EDTA in bioaugmented and non-bioaugmented soils, reaching an amount of 2.2 ± 0.08 and 1.6 ± 0.02 mg-CO2 g(-1) after 14 days of incubation, respectively. GC-MS revealed that 91.5% of the C14-C30 alkanes were degraded after 42 days when 10 mM EDTA and the bacterial consortium were added together. MiSeq sequencing showed that 78-91% of retrieved sequences in the original soil belonged to Deinococci, Alphaproteobacteria, Gammaproteobacteia and Bacilli. The same bacterial classes were detected in the 10 mM EDTA-treated soils, however with slight differences in their relative abundances. In the bioaugmented soils, only Alcanivorax sp. MH3 and Parvibaculum sp. MH21 from the exogenous bacterial consortium could survive until the end of the experiment. We conclude that the addition of EDTA at appropriate concentrations could facilitate biodegradation processes by increasing hydrocarbon availability to microbes. The addition of exogenous oil-degrading bacteria along with EDTA could serve as an ideal solution for the decontamination of oil-contaminated desert soils. Copyright © 2016 Elsevier Ltd. All rights reserved.

Characteristics and functions of semi-desert soils in the Negev (Israel) depending on precipitation, relief and vegetation

NASA Astrophysics Data System (ADS)

Felde, V.; Drahorad, S.; Felix-Henningsen, P.

2009-04-01

The Negev desert in south western Israel has been the subject of several investigations concerning soil forming processes and matter fluxes in desert soils. In order to investigate the influence of the ‘global change' on semi-desert ecosystems, study sites along a steep rainfall gradient are of great advantage. The study site "Nizzana 69", which is in the focus of this study, lies about 25 km south of the Mediterranean Sea near the border between Israel and Egypt. The area has an annual rainfall of approximately 170 mm * a-1. A catena consisting of six profiles, three under the legume Retama raetam and three in the bare interspace between shrubs was investigated in order to show the impact of this perennial plant and the relief on soil properties. The results show a strong influence of the shrub due to accumulation of nutrients, carbonates and soluble salts, which were precipitated with dust and rainfall, or which derive from mineralisation of plant litter. The interspace between the plants is covered by a biological soil crust, which also strongly influences the matter fluxes by creating runoff, nitrogen-fixation and stabilizing the soil surface and protecting it against deflation. The distribution of salts and carbonates in the profiles indicate leaching processes. All soils of the study site "Nizzana 69" are weekly developed Arenosols without horizons of carbonate or salt enrichment to a depth of 1 m. The comparison with other areas along the rainfall gradient shows higher inputs of soluble salts with increasing precipitation due to wet deposition, while carbonate contents increase with decreasing precipitation due to deposition of dust, which was generated in the lime stone Negev. On the other hand leaching of soluble soil constituents decreases and accumulation in the upper soil horizon increases with decreasing annual precipitation. Furthermore the importance of local relief aspects for plant growth decreases with increasing rainfall.

Divergent variations in concentrations of chemical elements among shrub organs in a temperate desert

PubMed Central

He, Mingzhu; Song, Xin; Tian, Fuping; Zhang, Ke; Zhang, Zhishan; Chen, Ning; Li, Xinrong

2016-01-01

Desert shrubs, a dominant component of desert ecosystems, need to maintain sufficient levels of nutrients in their different organs to ensure operation of various physiological functions for the purpose of survival and reproduction. In the present study, we analyzed 10 elements in leaves, stems, and roots of 24 dominant shrub species from 52 sites across a temperate desert ecosystem in northwestern China. We found that concentrations of all 10 elements were higher in leaves than in stems and roots, that non-legumes had higher levels of leaf Na and Mg than did legumes, and that Na was more concentrated in C4 leaves than in C3 leaves. Scaling relationships of elements between the photosynthetic organ (leaf) and non-photosynthetic organs (stem and root) were allometric. Results of principal components analysis (PCA) highlighted the important role of the elements responsible for osmoregulation (K and Na) in water utilization of desert shrubs. Soil properties and taxonomy explained most variation of element concentrations in desert shrubs. Desert shrubs may not be particularly susceptible to future change in climate factors, because most elements (including N, P, K, Ca, Mn, Zn, and Cu) associated with photosynthesis, osmoregulation, enzyme activity, and water use efficiency primarily depend on soil conditions. PMID:26818575

Divergent variations in concentrations of chemical elements among shrub organs in a temperate desert.

PubMed

He, Mingzhu; Song, Xin; Tian, Fuping; Zhang, Ke; Zhang, Zhishan; Chen, Ning; Li, Xinrong

2016-01-28

Desert shrubs, a dominant component of desert ecosystems, need to maintain sufficient levels of nutrients in their different organs to ensure operation of various physiological functions for the purpose of survival and reproduction. In the present study, we analyzed 10 elements in leaves, stems, and roots of 24 dominant shrub species from 52 sites across a temperate desert ecosystem in northwestern China. We found that concentrations of all 10 elements were higher in leaves than in stems and roots, that non-legumes had higher levels of leaf Na and Mg than did legumes, and that Na was more concentrated in C4 leaves than in C3 leaves. Scaling relationships of elements between the photosynthetic organ (leaf) and non-photosynthetic organs (stem and root) were allometric. Results of principal components analysis (PCA) highlighted the important role of the elements responsible for osmoregulation (K and Na) in water utilization of desert shrubs. Soil properties and taxonomy explained most variation of element concentrations in desert shrubs. Desert shrubs may not be particularly susceptible to future change in climate factors, because most elements (including N, P, K, Ca, Mn, Zn, and Cu) associated with photosynthesis, osmoregulation, enzyme activity, and water use efficiency primarily depend on soil conditions.

Nighttime water absorption by a bare loess soil in a coastal desert

NASA Astrophysics Data System (ADS)

Ninari, N.; Berliner, P. R.

2003-04-01

The role of dew in arid and semi-arid ecosystems is considered to be of great importance. It can serve as a water source for the bacteria of biological crust, for plants and for small insects. The Negev Desert is a semiarid region characterized by winter rainfall with a very large inter-annual variability. Reports on measurements carried out in this area mention that up to 180 nights a year with dew were registered by a conventional Hiltner Dew Balance, with intensities that ranged from 0.1 to 0.2 mm per night (yielding a total of 15 mm per year, which is more than 10% of the total rainfall). The Hiltner dew balance is based on the continuous weighing of an artificial condensation plate that has a completely different energy balance from that of the soil surface above which it is installed. The Hiltner dew balance could, therefore, be considered as a ``potential dew" gauge, whose results are probably mainly correlated to atmospheric conditions. The prime objective of this work was, therefore, to quantify the amounts of dew deposition on the soil surface, and to compare these amounts to those measured by the Hiltner balance. Measurements were carried out at the Wadi Mashash Experimental Farm in the Negev. To estimate deposition and evaporation of dew, a micro-lysimeter (diameter: 20 cm; soil depth: 50 cm) with an undisturbed soil sample was installed flush with the soil surface. The following were continuously monitored: micro-lysimeter weight, incoming and reflected short wave radiation, net radiation, dry and wet bulb temperatures, wind speed, and soil heat flux. A Hiltner Dew Balance was placed close by as a reference to compare with previous measurements. Throughout the ``dew period" (spring, summer and fall), and at random intervals, soil samples were taken hourly during the whole night. The uppermost 10 cm of the soil was divided into 1 cm intervals, and the soil moisture content was measured (oven dry). During the above-mentioned night campaigns, no dew deposition could be visually detected on the soil surface. A mass gain was however registered with the ML and an increase in moisture content was observed. The Hiltner balance clearly underestimated dew deposition amounts. These results indicate that although no visual signs of dew deposition could be detected, moisture did penetrate into the soil.

Ecological controls on water-cycle response to climate variability in deserts

PubMed Central

Scanlon, B. R.; Levitt, D. G.; Reedy, R. C.; Keese, K. E.; Sully, M. J.

2005-01-01

The impact of climate variability on the water cycle in desert ecosystems is controlled by biospheric feedback at interannual to millennial timescales. This paper describes a unique field dataset from weighing lysimeters beneath nonvegetated and vegetated systems that unequivocally demonstrates the role of vegetation dynamics in controlling water cycle response to interannual climate variability related to El Niño southern oscillation in the Mojave Desert. Extreme El Niño winter precipitation (2.3-2.5 times normal) typical of the U.S. Southwest would be expected to increase groundwater recharge, which is critical for water resources in semiarid and arid regions. However, lysimeter data indicate that rapid increases in vegetation productivity in response to elevated winter precipitation reduced soil water storage to half of that in a nonvegetated lysimeter, thereby precluding deep drainage below the root zone that would otherwise result in groundwater recharge. Vegetation dynamics have been controlling the water cycle in interdrainage desert areas throughout the U.S. Southwest, maintaining dry soil conditions and upward soil water flow since the last glacial period (10,000-15,000 yr ago), as shown by soil water chloride accumulations. Although measurements are specific to the U.S. Southwest, correlations between satellite-based vegetation productivity and elevated precipitation related to El Niño southern oscillation indicate this model may be applicable to desert basins globally. Understanding the two-way coupling between vegetation dynamics and the water cycle is critical for predicting how climate variability influences hydrology and water resources in water-limited landscapes. PMID:15837922

Bacterial Communities and the Nitrogen Cycle in the Gypsum Soils of Cuatro Ciénegas Basin, Coahuila: A Mars Analogue

PubMed Central

López-Lozano, Nguyen E.; Eguiarte, Luis E.; Bonilla-Rosso, Germán; García-Oliva, Felipe; Martínez-Piedragil, Celeste; Rooks, Christine

2012-01-01

Abstract The OMEGA/Mars Express hyperspectral imager identified gypsum at several sites on Mars in 2005. These minerals constitute a direct record of past aqueous activity and are important with regard to the search of extraterrestrial life. Gale Crater was chosen as Mars Science Laboratory Curiosity's landing site because it is rich in gypsum, as are some desert soils of the Cuatro Ciénegas Basin (CCB) (Chihuahuan Desert, Mexico). The gypsum of the CCB, which is overlain by minimal carbonate deposits, was the product of magmatic activity that occurred under the Tethys Sea. To examine this Mars analogue, we retrieved gypsum-rich soil samples from two contrasting sites with different humidity in the CCB. To characterize the site, we obtained nutrient data and analyzed the genes related to the N cycle (nifH, nirS, and nirK) and the bacterial community composition by using 16S rRNA clone libraries. As expected, the soil content for almost all measured forms of carbon, nitrogen, and phosphorus were higher at the more humid site than at the drier site. What was unexpected is the presence of a rich and divergent community at both sites, with higher taxonomic diversity at the humid site and almost no taxonomic overlap. Our results suggest that the gypsum-rich soils of the CCB host a unique microbial ecosystem that includes novel microbial assemblies. Key Words: Cuatro Ciénegas Basin—Gale Crater—Gypsum soil microbial diversity—Molecular ecology—Nitrogen cycle. Astrobiology 12, 699–709. PMID:22920518

Rainfall limit of the N cycle on Earth

USGS Publications Warehouse

Ewing, S.A.; Michalski, G.; Thiemens, M.; Quinn, R.C.; Macalady, J.L.; Kohl, S.; Wankel, Scott D.; Kendall, C.; McKay, C.P.; Amundson, Ronald

2007-01-01

In most climates on Earth, biological processes control soil N. In the Atacama Desert of Chile, aridity severely limits biology, and soils accumulate atmospheric NO3-. We examined this apparent transformation of the soil N cycle using a series of ancient Atacama Desert soils (>2 My) that vary in rainfall (21 to <2 mm yr-1). With decreasing rainfall, soil organic C decreases to 0.3 kg C m-2 and biological activity becomes minimal, while soil NO3- and organic N increase to 4 kg N m-2 and 1.4 kg N m-2, respectively. Atmospheric NO3- (??17O = 23.0???) increases from 39% to 80% of total soil NO3- as rainfall decreases. These soils capture the transition from a steady state, biologically mediated soil N cycle to a dominantly abiotic, transient state of slowly accumulating atmospheric N. This transition suggests that oxidized soil N may be present in an even more and and abiotic environment: Mars. Copyright 2007 by the American Geophysical Union.

Single-particle mineralogy of Chinese soil particles by the combined use of low-Z particle electron probe X-ray microanalysis and attenuated total reflectance-FT-IR imaging techniques.

PubMed

Malek, Md Abdul; Kim, Bowha; Jung, Hae-Jin; Song, Young-Chul; Ro, Chul-Un

2011-10-15

Our previous work on the speciation of individual mineral particles of micrometer size by the combined use of attenuated total reflectance FT-IR (ATR-FT-IR) imaging and a quantitative energy-dispersive electron probe X-ray microanalysis technique (EPMA), low-Z particle EPMA, demonstrated that the combined use of these two techniques is a powerful approach for looking at the single-particle mineralogy of externally heterogeneous minerals. In this work, this analytical methodology was applied to characterize six soil samples collected at arid areas in China, in order to identify mineral types present in the samples. The six soil samples were collected from two types of soil, i.e., loess and desert soils, for which overall 665 particles were analyzed on a single particle basis. The six soil samples have different mineralogical characteristics, which were clearly differentiated in this work. As this analytical methodology provides complementary information, the ATR-FT-IR imaging on mineral types, and low-Z particle EPMA on the morphology and elemental concentrations, on the same individual particles, more detailed information can be obtained using this approach than when either low-Z particle EPMA or ATR-FT-IR imaging techniques are used alone, which has a great potential for the characterization of Asian dust and mineral dust particles. © 2011 American Chemical Society

Soil and surface layer type affect non-rainfall water inputs

NASA Astrophysics Data System (ADS)

Agam, Nurit; Berliner, Pedro; Jiang, Anxia

2017-04-01

Non-rainfall water inputs (NRWIs), which include fog deposition, dew formation, and direct water vapor adsorption by the soil, play a vital role in arid and semiarid regions. Environmental conditions, namely radiation, air temperature, air humidity, and wind speed, largely affect the water cycle driven by NRWIs. The substrate type (soil type and the existence/absence of a crust layer) may as well play a major role. Our objective was to quantify the effects of soil type (loess vs. sand) and surface layer (bare vs. crusted) on the gain and posterior evaporation of NRWIs in the Negev Highlands throughout the dry summer season. Four undisturbed soil samples (20 cm diameter and 50 cm depth) were excavated and simultaneously introduced into a PVC tube. Two samples were obtained in the Negev's Boker plain (loess soil) and two in the Nizzana sand dunes in the Western Negev. On one sample from each site the crust was removed while on the remaining one the natural crust was left in place. The samples were brought to the research site at the Jacob Bluestein Institutes for Desert Research, Ben-Gurion University of the Negev, Israel (31˚08' N, 34˚53' E, 400 meter above the sea level) where they were exposed to the same environmental conditions. The four samples in their PVC tubes were placed on top of scales and the samples mass was continuously monitored. Soil temperatures were monitored at depths of 1, 2, 3, 5 and10 cm in each microlysimeter (ML) using Copper-Constantan thermocouples. The results of particle size distribution indicated that the crust of the loess soil is probably a physical crust, i.e., a crust that forms due to raindroplets impact; while the crust on the sand soil is biological. On most days, the loess soils adsorbed more water than their corresponding sand soil samples. For both soils, the samples for which the crust was removed adsorbed more water than the samples for which it was intact. The difference in daily water adsorption amount between crusted and non-crusted sandy soils often exceeded that between crusted and non-crusted loess soils.

Microbial hitchhikers on intercontinental dust: catching a lift in Chad

PubMed Central

Favet, Jocelyne; Lapanje, Ales; Giongo, Adriana; Kennedy, Suzanne; Aung, Yin-Yin; Cattaneo, Arlette; Davis-Richardson, Austin G; Brown, Christopher T; Kort, Renate; Brumsack, Hans-Jürgen; Schnetger, Bernhard; Chappell, Adrian; Kroijenga, Jaap; Beck, Andreas; Schwibbert, Karin; Mohamed, Ahmed H; Kirchner, Timothy; de Quadros, Patricia Dorr; Triplett, Eric W; Broughton, William J; Gorbushina, Anna A

2013-01-01

Ancient mariners knew that dust whipped up from deserts by strong winds travelled long distances, including over oceans. Satellite remote sensing revealed major dust sources across the Sahara. Indeed, the Bodélé Depression in the Republic of Chad has been called the dustiest place on earth. We analysed desert sand from various locations in Chad and dust that had blown to the Cape Verde Islands. High throughput sequencing techniques combined with classical microbiological methods showed that the samples contained a large variety of microbes well adapted to the harsh desert conditions. The most abundant bacterial groupings in four different phyla included: (a) Firmicutes—Bacillaceae, (b) Actinobacteria—Geodermatophilaceae, Nocardiodaceae and Solirubrobacteraceae, (c) Proteobacteria—Oxalobacteraceae, Rhizobiales and Sphingomonadaceae, and (d) Bacteroidetes—Cytophagaceae. Ascomycota was the overwhelmingly dominant fungal group followed by Basidiomycota and traces of Chytridiomycota, Microsporidia and Glomeromycota. Two freshwater algae (Trebouxiophyceae) were isolated. Most predominant taxa are widely distributed land inhabitants that are common in soil and on the surfaces of plants. Examples include Bradyrhizobium spp. that nodulate and fix nitrogen in Acacia species, the predominant trees of the Sahara as well as Herbaspirillum (Oxalobacteraceae), a group of chemoorganotrophic free-living soil inhabitants that fix nitrogen in association with Gramineae roots. Few pathogenic strains were found, suggesting that African dust is not a large threat to public health. PMID:23254516

The Impact of Solar Arrays on Arid Soil Hydrology: Some Numerical Simulations

NASA Astrophysics Data System (ADS)

Luo, Y.; Berli, M.; Koonce, J.; Shillito, R.; Dijkema, J.; Ghezzehei, T. A.; Yu, Z.

2016-12-01

Hot deserts are prime locations for solar energy generation but also recognized as particularly fragile environments. Minimizing the impact of facility-scale solar installations on desert environments is therefore of increasing concern. This study focuses on the impact of photovoltaic solar arrays on the water balance of arid soil underneath the array. The goal was to explore whether concentrated rainwater infiltration along the solar panel drip lines would lead to deeper infiltration and an increase in soil water storage in the long term. A two-dimensional HYDRUS model was developed to simulate rainwater infiltration into the soil within a photovoltaic solar array. Results indicate that rainwater infiltrates deeper below the drip lines compared to the areas between solar panels but only for coarse textured soil. Finer-textured soils redistribute soil moisture horizontally and the concentrating effect of solar panels on rainwater infiltration appears to be small.

Heterogeneity of soil surface temperature induced by xerophytic shrub in a revegetated desert ecosystem, northwestern China

NASA Astrophysics Data System (ADS)

Zhang, Ya-Feng; Wang, Xin-Ping; Pan, Yan-Xia; Hu, Rui; Zhang, Hao

2013-06-01

Variation characteristics of the soil surface temperature induced by shrub canopy greatly affects the near-surface biological and biochemical processes in desert ecosystems. However, information regarding the effects of shrub upon the heterogeneity of soil surface temperature is scarce. Here we aimed to characterize the effects of shrub ( Caragana korshinskii) canopy on the soil surface temperature heterogeneity at areas under shrub canopy and the neighbouring bare ground. Diurnal variations of soil surface temperature were measured at areas adjacent to the shrub base (ASB), beneath the midcanopy (BMC), and in the bare intershrub spaces (BIS) at the eastern, southern, western and northern aspects of shrub, respectively. Results indicated that diurnal mean soil surface temperature under the C. korshinskii canopy (ASB and BMC) was significantly lower than in the BIS, with the highest in the BIS, followed by the BMC and ASB. The diurnal maximum and diurnal variations of soil surface temperatures under canopy vary strongly with different aspects of shrub with the diurnal variation in solar altitude, which could be used as cues to detect safe sites for under-canopy biota. A significant empirical linear relationship was found between soil surface temperature and solar altitude, suggesting an empirical predicator that solar altitude can serve for soil surface temperature. Lower soil surface temperatures under the canopy than in the bare intershrub spaces imply that shrubs canopy play a role of `cool islands' in the daytime in terms of soil surface temperature during hot summer months in the desert ecosystems characterized by a mosaic of sparse vegetation and bare ground.

Mineralogical, chemical, organic and microbial properties of subsurface soil cores from Mars Desert Research Station (Utah, USA): Phyllosilicate and sulfate analogues to Mars mission landing sites

NASA Astrophysics Data System (ADS)

Stoker, Carol R.; Clarke, Jonathan; Direito, Susana O. L.; Blake, David; Martin, Kevin R.; Zavaleta, Jhony; Foing, Bernard

2011-07-01

We collected and analysed soil cores from four geologic units surrounding Mars Desert Research Station (MDRS) Utah, USA, including Mancos Shale, Dakota Sandstone, Morrison formation (Brushy Basin member) and Summerville formation. The area is an important geochemical and morphological analogue to terrains on Mars. Soils were analysed for mineralogy by a Terra X-ray diffractometer (XRD), a field version of the CheMin instrument on the Mars Science Laboratory (MSL) mission (2012 landing). Soluble ion chemistry, total organic content and identity and distribution of microbial populations were also determined. The Terra data reveal that Mancos and Morrison soils are rich in phyllosilicates similar to those observed on Mars from orbital measurements (montmorillonite, nontronite and illite). Evaporite minerals observed include gypsum, thenardite, polyhalite and calcite. Soil chemical analysis shows sulfate the dominant anion in all soils and SO4>>CO3, as on Mars. The cation pattern Na>Ca>Mg is seen in all soils except for the Summerville where Ca>Na. In all soils, SO4 correlates with Na, suggesting sodium sulfates are the dominant phase. Oxidizable organics are low in all soils and range from a high of 0.7% in the Mancos samples to undetectable at a detection limit of 0.1% in the Morrison soils. Minerals rich in chromium and vanadium were identified in Morrison soils that result from diagenetic replacement of organic compounds. Depositional environment, geologic history and mineralogy all affect the ability to preserve and detect organic compounds. Subsurface biosphere populations were revealed to contain organisms from all three domains (Archaea, Bacteria and Eukarya) with cell density between 3.0×106 and 1.8×107 cells ml-1 at the deepest depth. These measurements are analogous to data that could be obtained on future robotic or human Mars missions and results are relevant to the MSL mission that will investigate phyllosilicates on Mars.

The correlation between indoor and in soil radon concentrations in a desert climate

NASA Astrophysics Data System (ADS)

Al-Khateeb, H. M.; Aljarrah, K. M.; Alzoubi, F. Y.; Alqadi, M. K.; Ahmad, A. A.

2017-01-01

This study examines the levels and the correlation between indoor and in soil radon concentration in a desert climate. The measurements are carried out, in Jordan desert in AlMafraq district, using the passive integrated technique. An intelligent automated tracks counting system, modified recently by our group, is used to estimate the overlapping tracks and to decrease the counting percentage error. Results show that radon concentration in soil expands from 4.09 to 11.30 kBq m-3, with an average of 7.53 kBq m-3. Indoor radon concentrations vary from 20.2 Bq m-3 in the AlMafraq city to 46.7 Bq m-3 in Housha village and with an average of 29.6 Bq m-3. All of individual indoor radon concentrations are lower than the limit (100 Bq m-3) recommended by WHO except two dwellings in Housha village which found being higher than this limit. A moderate linear correlation (R2=0.66) was observed between indoor and in soil radon concentrations in the investigated region. Our results showed that an in soil radon measurement can be a satisfactory predictor for indoor radon potential.

Soil respiration in the cold desert environment of the Colorado Plateau (USA): Abiotic regulators and thresholds

USGS Publications Warehouse

Fernandez, D.P.; Neff, J.C.; Belnap, J.; Reynolds, R.L.

2006-01-01

Decomposition is central to understanding ecosystem carbon exchange and nutrient-release processes. Unlike mesic ecosystems, which have been extensively studied, xeric landscapes have received little attention; as a result, abiotic soil-respiration regulatory processes are poorly understood in xeric environments. To provide a more complete and quantitative understanding about how abiotic factors influence soil respiration in xeric ecosystems, we conducted soil- respiration and decomposition-cloth measurements in the cold desert of southeast Utah. Our study evaluated when and to what extent soil texture, moisture, temperature, organic carbon, and nitrogen influence soil respiration and examined whether the inverse-texture hypothesis applies to decomposition. Within our study site, the effect of texture on moisture, as described by the inverse texture hypothesis, was evident, but its effect on decomposition was not. Our results show temperature and moisture to be the dominant abiotic controls of soil respiration. Specifically, temporal offsets in temperature and moisture conditions appear to have a strong control on soil respiration, with the highest fluxes occurring in spring when temperature and moisture were favorable. These temporal offsets resulted in decomposition rates that were controlled by soil moisture and temperature thresholds. The highest fluxes of CO2 occurred when soil temperature was between 10 and 16??C and volumetric soil moisture was greater than 10%. Decomposition-cloth results, which integrate decomposition processes across several months, support the soil-respiration results and further illustrate the seasonal patterns of high respiration rates during spring and low rates during summer and fall. Results from this study suggest that the parameters used to predict soil respiration in mesic ecosystems likely do not apply in cold-desert environments. ?? Springer 2006.

Review of samples of tailings, soils and stream sediment adjacent to and downstream from the Ruth Mine, Inyo County, California

USGS Publications Warehouse

Rytuba, James J.; Kim, Christopher S.; Goldstein, Daniel N.

2011-01-01

The Ruth Mine and mill are located in the western Mojave Desert in Inyo County, California (fig. 1). The mill processed gold-silver (Au-Ag) ores mined from the Ruth Au-Ag deposit, which is adjacent to the mill site. The Ruth Au-Ag deposit is hosted in Mesozoic intrusive rocks and is similar to other Au-Ag deposits in the western Mojave Desert that are associated with Miocene volcanic centers that formed on a basement of Mesozoic granitic rocks (Bateman, 1907; Gardner, 1954; Rytuba, 1996). The volcanic rocks consist of silicic domes and associated flows, pyroclastic rocks, and subvolcanic intrusions (fig. 2) that were emplaced into Mesozoic silicic intrusive rocks (Troxel and Morton, 1962). The Ruth Mine is on Federal land managed by the U.S. Bureau of Land Management (BLM). Tailings from the mine have been eroded and transported downstream into Homewood Canyon and then into Searles Valley (figs. 3, 4, 5, and 6). The BLM provided recreational facilities at the mine site for day-use hikers and restored and maintained the original mine buildings in collaboration with local citizen groups for use by visitors (fig. 7). The BLM requested that the U.S. Geological Survey (USGS), in collaboration with Chapman University, measure arsenic (As) and other geochemical constituents in soils and tailings at the mine site and in stream sediments downstream from the mine in Homewood Canyon and in Searles Valley (fig. 3). The request was made because initial sampling of the site by BLM staff indicated high concentrations of As in tailings and soils adjacent to the Ruth Mine. This report summarizes data obtained from field sampling of mine tailings and soils adjacent to the Ruth Mine and stream sediments downstream from the mine on June 7, 2009. Our results permit a preliminary assessment of the sources of As and associated chemical constituents that could potentially impact humans and biota.

Effect of Biostimulation Using Sewage Sludge, Soybean Meal, and Wheat Straw on Oil Degradation and Bacterial Community Composition in a Contaminated Desert Soil

PubMed Central

Al-Kindi, Sumaiya; Abed, Raeid M. M.

2016-01-01

Waste materials have a strong potential in the bioremediation of oil-contaminated sites, because of their richness in nutrients and their economical feasibility. We used sewage sludge, soybean meal, and wheat straw to biostimulate oil degradation in a heavily contaminated desert soil. While oil degradation was assessed by following the produced CO2 and by using gas chromatography–mass spectrometry (GC–MS), shifts in bacterial community composition were monitored using illumina MiSeq. The addition of sewage sludge and wheat straw to the desert soil stimulated the respiration activities to reach 3.2–3.4 times higher than in the untreated soil, whereas the addition of soybean meal resulted in an insignificant change in the produced CO2, given the high respiration activities of the soybean meal alone. GC–MS analysis revealed that the addition of sewage sludge and wheat straw resulted in 1.7–1.8 fold increase in the degraded C14 to C30 alkanes, compared to only 1.3 fold increase in the case of soybean meal addition. The degradation of ≥90% of the C14 to C30 alkanes was measured in the soils treated with sewage sludge and wheat straw. MiSeq sequencing revealed that the majority (76.5–86.4% of total sequences) of acquired sequences from the untreated soil belonged to Alphaproteobacteria, Gammaproteobacteria, and Firmicutes. Multivariate analysis of operational taxonomic units placed the bacterial communities of the soils after the treatments in separate clusters (ANOSIM R = 0.66, P = 0.0001). The most remarkable shift in bacterial communities was in the wheat straw treatment, where 95–98% of the total sequences were affiliated to Bacilli. We conclude that sewage sludge and wheat straw are useful biostimulating agents for the cleanup of oil-contaminated desert soils. PMID:26973618

Carbon and nitrogen fixation differ between successional stages of biological soil crusts in the Colorado Plateau and Chihuahuan Desert

USGS Publications Warehouse

Housman, D.C.; Powers, H.H.; Collins, A.D.; Belnap, J.

2006-01-01

Biological soil crusts (cyanobacteria, mosses and lichens collectively) perform essential ecosystem services, including carbon (C) and nitrogen (N) fixation. Climate and land-use change are converting later successional soil crusts to early successional soil crusts with lower C and N fixation rates. To quantify the effect of such conversions on C and N dynamics in desert ecosystems we seasonally measured diurnal fixation rates in different biological soil crusts. We classified plots on the Colorado Plateau (Canyonlands) and Chihuahuan Desert (Jornada) as early (Microcoleus) or later successional (Nostoc/Scytonema or Placidium/Collema) and measured photosynthesis (Pn), nitrogenase activity (NA), and chlorophyll fluorescence (Fv/Fm) on metabolically active (moist) soil crusts. Later successional crusts typically had greater Pn, averaging 1.2-1.3-fold higher daily C fixation in Canyonlands and 2.4-2.8-fold higher in the Jornada. Later successional crusts also had greater NA, averaging 1.3-7.5-fold higher daily N fixation in Canyonlands and 1.3-25.0-fold higher in the Jornada. Mean daily Fv/Fm was also greater in later successional Canyonlands crusts during winter, and Jornada crusts during all seasons except summer. Together these findings indicate conversion of soil crusts back to early successional stages results in large reductions of C and N inputs into these ecosystems.

Comparisons of diazotrophic communities in native and agricultural desert ecosystems reveal plants as important drivers in diversity

PubMed Central

Köberl, Martina; Erlacher, Armin; Ramadan, Elshahat M.; El-Arabi, Tarek F.; Müller, Henry; Bragina, Anastasia; Berg, Gabriele

2015-01-01

Diazotrophs provide the only biological source of fixed atmospheric nitrogen in the biosphere. Although they are the key player for plant-available nitrogen, less is known about their diversity and potential importance in arid ecosystems. We investigated the nitrogenase gene diversity in native and agricultural desert soil as well as within root-associated microbiota of medicinal plants grown in Egypt through the combination of nifH-specific qPCR, fingerprints, amplicon pyrosequencing and fluorescence in situ hybridization–confocal laser scanning microscopy. Although the diazotrophic microbiota were characterized by generally high abundances and diversity, statistically significant differences were found between both soils, the different microhabitats, and between the investigated plants (Matricaria chamomilla L., Calendula officinalis L. and Solanum distichum Schumach. and Thonn.). We observed a considerable community shift from desert to agriculturally used soil that demonstrated a higher abundance and diversity in the agro-ecosystem. The endorhiza was characterized by lower abundances and only a subset of species when compared to the rhizosphere. While the microbiomes of the Asteraceae were similar and dominated by potential root-nodulating rhizobia acquired primarily from soil, the perennial S. distichum generally formed associations with free-living nitrogen fixers. These results underline the importance of diazotrophs in desert ecosystems and additionally identify plants as important drivers in functional gene pool diversity. PMID:26705571

Diel-scale temporal dynamics recorded for bacterial groups in Namib Desert soil

PubMed Central

Gunnigle, Eoin; Frossard, Aline; Ramond, Jean-Baptiste; Guerrero, Leandro; Seely, Mary; Cowan, Don A.

2017-01-01

Microbes in hot desert soil partake in core ecosystem processes e.g., biogeochemical cycling of carbon. Nevertheless, there is still a fundamental lack of insights regarding short-term (i.e., over a 24-hour [diel] cycle) microbial responses to highly fluctuating microenvironmental parameters like temperature and humidity. To address this, we employed T-RFLP fingerprinting and 454 pyrosequencing of 16S rRNA-derived cDNA to characterize potentially active bacteria in Namib Desert soil over multiple diel cycles. Strikingly, we found that significant shifts in active bacterial groups could occur over a single 24-hour period. For instance, members of the predominant Actinobacteria phyla exhibited a significant reduction in relative activity from morning to night, whereas many Proteobacterial groups displayed an opposite trend. Contrary to our leading hypothesis, environmental parameters could only account for 10.5% of the recorded total variation. Potential biotic associations shown through co-occurrence networks indicated that non-random inter- and intra-phyla associations were ‘time-of-day-dependent’ which may constitute a key feature of this system. Notably, many cyanobacterial groups were positioned outside and/or between highly interconnected bacterial associations (modules); possibly acting as inter-module ‘hubs’ orchestrating interactions between important functional consortia. Overall, these results provide empirical evidence that bacterial communities in hot desert soils exhibit complex and diel-dependent inter-community associations. PMID:28071697

Comparisons of diazotrophic communities in native and agricultural desert ecosystems reveal plants as important drivers in diversity.

PubMed

Köberl, Martina; Erlacher, Armin; Ramadan, Elshahat M; El-Arabi, Tarek F; Müller, Henry; Bragina, Anastasia; Berg, Gabriele

2016-02-01

Diazotrophs provide the only biological source of fixed atmospheric nitrogen in the biosphere. Although they are the key player for plant-available nitrogen, less is known about their diversity and potential importance in arid ecosystems. We investigated the nitrogenase gene diversity in native and agricultural desert soil as well as within root-associated microbiota of medicinal plants grown in Egypt through the combination of nifH-specific qPCR, fingerprints, amplicon pyrosequencing and fluorescence in situ hybridization-confocal laser scanning microscopy. Although the diazotrophic microbiota were characterized by generally high abundances and diversity, statistically significant differences were found between both soils, the different microhabitats, and between the investigated plants (Matricaria chamomilla L., Calendula officinalis L. and Solanum distichum Schumach. and Thonn.). We observed a considerable community shift from desert to agriculturally used soil that demonstrated a higher abundance and diversity in the agro-ecosystem. The endorhiza was characterized by lower abundances and only a subset of species when compared to the rhizosphere. While the microbiomes of the Asteraceae were similar and dominated by potential root-nodulating rhizobia acquired primarily from soil, the perennial S. distichum generally formed associations with free-living nitrogen fixers. These results underline the importance of diazotrophs in desert ecosystems and additionally identify plants as important drivers in functional gene pool diversity. © FEMS 2015.

Validation of a Clostridium Endospore Viability Assay and Analysis of Greenland Ices and Atacama Desert Soils▿ †

PubMed Central

Yang, Wan-Wan; Ponce, Adrian

2011-01-01

A microscopy-based endospore viability assay (micro-EVA) capable of enumerating germinable Clostridium endospores (GCEs) in less than 30 min has been validated and employed to determine GCE concentrations in Greenland ices and Atacama Desert soils. Inoculation onto agarose doped with Tb3+ and d-alanine triggers Clostridium spore germination and the concomitant release of ∼108 molecules of dipicolinic acid (DPA) per endospore, which, under pulsed UV excitation, enables enumeration of resultant green Tb3+-DPA luminescent spots as GCEs with time-gated luminescence microscopy. The intensity time courses of the luminescent spots were characteristic of stage I Clostridium spore germination dynamics. Micro-EVA was validated against traditional CFU cultivation from 0 to 1,000 total endospores/ml (i.e., phase-bright bodies/ml), yielding 56.4% ± 1.5% GCEs and 43.0% ± 1.0% CFU. We also show that d-alanine serves as a Clostridium-specific germinant (three species tested) that inhibits Bacillus germination of spores (five species tested) in that endospore concentration regime. Finally, GCE concentrations in Greenland ice cores and Atacama Desert soils were determined with micro-EVA, yielding 1 to 2 GCEs/ml of Greenland ice (versus <1 CFU/ml after 6 months of incubation) and 66 to 157 GCEs/g of Atacama Desert soil (versus 40 CFU/g soil). PMID:21296951

Diel-scale temporal dynamics recorded for bacterial groups in Namib Desert soil

NASA Astrophysics Data System (ADS)

Gunnigle, Eoin; Frossard, Aline; Ramond, Jean-Baptiste; Guerrero, Leandro; Seely, Mary; Cowan, Don A.

2017-01-01

Microbes in hot desert soil partake in core ecosystem processes e.g., biogeochemical cycling of carbon. Nevertheless, there is still a fundamental lack of insights regarding short-term (i.e., over a 24-hour [diel] cycle) microbial responses to highly fluctuating microenvironmental parameters like temperature and humidity. To address this, we employed T-RFLP fingerprinting and 454 pyrosequencing of 16S rRNA-derived cDNA to characterize potentially active bacteria in Namib Desert soil over multiple diel cycles. Strikingly, we found that significant shifts in active bacterial groups could occur over a single 24-hour period. For instance, members of the predominant Actinobacteria phyla exhibited a significant reduction in relative activity from morning to night, whereas many Proteobacterial groups displayed an opposite trend. Contrary to our leading hypothesis, environmental parameters could only account for 10.5% of the recorded total variation. Potential biotic associations shown through co-occurrence networks indicated that non-random inter- and intra-phyla associations were ‘time-of-day-dependent’ which may constitute a key feature of this system. Notably, many cyanobacterial groups were positioned outside and/or between highly interconnected bacterial associations (modules); possibly acting as inter-module ‘hubs’ orchestrating interactions between important functional consortia. Overall, these results provide empirical evidence that bacterial communities in hot desert soils exhibit complex and diel-dependent inter-community associations.

Effects of sand burial on dew deposition on moss soil crust in a revegetated area of the Tennger Desert, Northern China

NASA Astrophysics Data System (ADS)

Jia, Rong-liang; Li, Xin-rong; Liu, Li-chao; Pan, Yan-xia; Gao, Yan-hong; Wei, Yong-ping

2014-11-01

Sand burial and dew deposition are two fundamental phenomena profoundly influencing biological soil crusts in desert areas. However, little information is available regarding the effects of sand burial on dew deposition on biological soil crusts in desert ecosystems. In this study, we evaluated the effects of sand burial at depths of 0 (control), 0.5, 1, 2 and 4 mm on dew formation and evaporation of three dominant moss crusts in a revegetated area of the Tengger Desert (Northern China) in 2010. The results revealed that sand burial significantly decreased the amount of dew deposited on the three moss crust types by acting as a semi-insulator retarding the dew formation and evaporation rates. The changes in surface temperature cannot fully explain the variations of the formation and evaporation rates of dew by moss crusts buried by sand. The extension of dew retention time was reflected by the higher dew ratios (the ratio of dew amount at a certain time to the maximum value in a daily course) in the daytime, and may to some extent have acted as compensatory mechanisms that diminished the negative effects of the reduction of dew amount induced by sand burial of moss crusts. The resistances to reduction of dewfall caused by sand burial among the three moss crusts were also compared and it was found that Bryum argenteum crust showed the highest tolerance, followed by crusts dominated by Didymodon vinealis and Syntrichia caninervis. This sequence corresponds well with the successional order of the three moss crusts in the revegetated area, thereby suggesting that resistance to reduction of dewfall may act as one mechanism by which sand burial drives the succession of moss crusts in desert ecosystems. This side effect of dew reduction induced by sand burial on biological soil crusts should be considered in future ecosystem construction and management of desert area.

In situ detection of microbial respiration in soils and salt flats. [Nevada desert

NASA Technical Reports Server (NTRS)

Tew, R. W.

1973-01-01

Increase in CO2 partial pressures over a desert soil treated with casamino-acids glucose solution correlated with bacterial growth. Few or no increases in numbers of bacteria or CO2 concentrations were noted in similar plots treated with water only or receiving no treatment. Growth in the soil appeared to be severely nutrient limited during the 10 day experiment. Especially rapid growth took place between the third and fifth day, when temperatures ranged from 0 deg. (night) to a maximum of 17.4 deg. (day). Under the conditions of the experiment, intermittent CO2 assay was an insensitive indicator of growth, possibly because of restiction of gas escape by the desert pavement or solution, exchange, or precipitation of carbonate, but more likely because of inefficient sealing of hoods to and below the soil surface. CO2 assay was unable to detect microbial successions. The unpredictable course of these successions, plus unpredictable relative retentions mitigates against assay of organic gases as reliable in situ detection of microbial activity, except perhaps in very alkaline environments such as Owens Lake salts.

Albedo indicating land degradation around the Badain Jaran Desert for better land resources utilization.

PubMed

Liu, Fengshan; Chen, Ying; Lu, Haiying; Shao, Hongbo

2017-02-01

Surface albedo is an easy access parameter in reflecting the status of both human disturbed soil and indirectly influenced area, whose characteristic is an important indicator in sustainable development under the background of global climate change. In this study, we employed meteorological data, MODIS 8-day BRDF/Albedo and LAI products from 2000 to 2014 to show the amelioration and mechanism around the Badain Jaran Desert. Results showed that the human-dominated afforestation activities significantly increased the leaf area index (LAI) in summer and autumn. Lower reflectance at visible band was sensed inside the desert compared with the ecozone and the lowest albedo at forested area. The contribution of soil and vegetation reflectance to surface albedo determined the linear sensitivity of albedo to LAI variation. Decreased albedo dominated the spatial-temporal pattern of the Badain Jaran Desert. This study suggested that surface albedo can be regarded as a useful index in indicating the change process and evaluating the sustainable development of biological management around the Badain Jaran Desert. Copyright © 2016. Published by Elsevier B.V.

Evapotranspiration partitioning, stomatal conductance, and components of the water balance: A special case of a desert ecosystem in China

NASA Astrophysics Data System (ADS)

Zhao, Wenzhi; Liu, Bing; Chang, Xuexiang; Yang, Qiyue; Yang, Yuting; Liu, Zhiling; Cleverly, James; Eamus, Derek

2016-07-01

Partitioning evapotranspiration (ET) into its components reveals details of the processes that underlie ecosystem hydrologic budgets and their feedback to the water cycle. We measured rates of actual evapotranspiration (ETa), canopy transpiration (Tc), soil evaporation (Eg), canopy-intercepted precipitation (EI), and patterns of stomatal conductance of the desert shrub Calligonum mongolicum in northern China to determine the water balance of this ecosystem. The ETa was 251 ± 8 mm during the growing period, while EI, Tc, and Eg accounted for 3.2%, 63.9%, and 31.3%, respectively, of total water use (256 ± 4 mm) during the growing period. In this unique ecosystem, groundwater was the main water source for plant transpiration and soil evaporation, Tc and exceeded 60% of the total annual water used by desert plants. ET was not sensitive to air temperature in this unique desert ecosystem. Partitioning ET into its components improves our understanding of the mechanisms that underlie adaptation of desert shrubs, especially the role of stomatal regulation of Tc as a determinant of ecosystem water balance.

Impact of disturbance on soil microbial activity in the Northern Chihuahuan Desert

USDA-ARS?s Scientific Manuscript database

Cryptobiotic soil crusts in arid regions contribute to ecosystem stability through increased water infiltration, soil aggregate stability, and nutrient cycling between the soil community and vascular plants. These crusts are particularly sensitive to compaction/fracturing disturbances such as livest...

Soilcrust Links

Science.gov Websites

Soil Crust Home Crust 101 Advanced Gallery References CCERS Site Links updated: April 24, 2006 /soils.htm This site has information on soil crusts, as well other information about the park. Biological Soil Crusts - Webs of Life in the Desert Two page, color handout on biological soils crusts. (303k PDF

Effects of nitrogen addition on soil microbes and their implications for soil C emission in the Gurbantunggut Desert, center of the Eurasian Continent.

PubMed

Huang, Gang; Cao, Yan Feng; Wang, Bin; Li, Yan

2015-05-15

Nitrogen (N) deposition can influence carbon cycling of terrestrial ecosystems. However, a general recognition of how soil microorganisms respond to increasing N deposition is not yet reached. We explored soil microbial responses to two levels of N addition (2.5 and 5 gN m(-2) yr(-1)) in interplant soil and beneath shrubs of Haloxylon ammodendron and their consequences to soil respiration in the Gurbantunggut Desert, northwestern China from 2011 to 2013. Microbial biomass and respiration were significantly higher beneath H. ammodendron than in interplant soil. The responses of microbial biomass carbon (MBC) and microbial respiration (MR) showed opposite responses to N addition in interplant and beneath H. ammodendron. N addition slightly increased MBC and MR in interplant soil and decreased them beneath H. ammodendron, with a significant inhibition only in 2012. N addition had no impacts on the total microbial physiological activity, but N addition decreased the labile carbon substrate utilization beneath H. ammodendron when N addition level was high. Phospholipid fatty acid (PLFA) analysis showed that N addition did not alter the soil microbial community structure as evidenced by the similar ratios of fungal to bacterial PLFAs and gram-negative to gram-positive bacterial PLFAs. Microbial biomass and respiration showed close correlations with soil water content and dissolved carbon, and they were independent of soil inorganic nitrogen across three years. Our study suggests that N addition effects on soil microorganisms and carbon emission are dependent on the respiratory substrates and water availability in the desert ecosystem. Copyright © 2015 Elsevier B.V. All rights reserved.

Robotic ecological mapping: Habitats and the search for life in the Atacama Desert

NASA Astrophysics Data System (ADS)

Warren-Rhodes, K.; Weinstein, S.; Piatek, J. L.; Dohm, J.; Hock, A.; Minkley, E.; Pane, D.; Ernst, L. A.; Fisher, G.; Emani, S.; Waggoner, A. S.; Cabrol, N. A.; Wettergreen, D. S.; Grin, E.; Coppin, P.; Diaz, Chong; Moersch, J.; Oril, G. G.; Smith, T.; Stubbs, K.; Thomas, G.; Wagner, M.; Wyatt, M.; Boyle, L. Ng

2007-12-01

As part of the three-year `Life in the Atacama' (LITA) project, plant and microbial abundance were mapped within three sites in the Atacama Desert, Chile, using an automated robotic rover. On-board fluorescence imaging of six biological signatures (e.g., chlorophyll, DNA, proteins) was used to assess abundance, based on a percent positive sample rating system and standardized robotic ecological transects. The percent positive rating system scored each sample based on the measured signal strength (0 for no signal to 2 for strong signal) for each biological signature relative to the total rating possible. The 2005 field experiment results show that percent positive ratings varied significantly across Site D (coastal site with fog), with patchy zones of high abundance correlated with orbital and microscale habitat types (heaved surface crust and gravel bars); alluvial fan habitats generally had lower abundance. Non-random multi-scale biological patchiness also characterized interior desert Sites E and F, with relatively high abundance associated with (paleo)aqueous habitats such as playas. Localized variables, including topography, played an important, albeit complex, role in microbial spatial distribution. Site D biosignature trends correlated with culturable soil bacteria, with MPN ranging from 10-1000 CFU/g-soil, and chlorophyll ratings accurately mapped lichen/moss abundance (Site D) and higher plant (Site F) distributions. Climate also affected biological patchiness, with significant correlation shown between abundance and (rover) air relative humidity, while lichen patterns were linked to the presence of fog. Rover biological mapping results across sites parallel longitudinal W-E wet/dry/wet Atacama climate trends. Overall, the study highlights the success of targeting of aqueous-associated habitats identifiable from orbital geology and mineralogy. The LITA experience also suggests the terrestrial study of life and its distribution, particularly the fields of landscape ecology and ecohydrology, hold critical lessons for the search for life on other planets. Their applications to robotic sampling strategies on Mars should be further exploited.

Soil heterogeneity in Mojave Desert shrublands: Biotic and abiotic processes

NASA Astrophysics Data System (ADS)

Caldwell, Todd G.; Young, Michael H.; McDonald, Eric V.; Zhu, Jianting

2012-09-01

Geological and ecological processes play critical roles in the evolution of desert piedmonts. Feedback between fast cyclic biotic and slow cumulative pedogenic processes on arid alluvial fan systems results in a heterogeneous landscape of interspace and canopy microsites. Defining the spatial extent between these processes will allow a better connection to ecosystem service and climate change. We use a soil chronosequence in the Mojave Desert and high spatial resolution infiltrometer measurements along transects radiating from canopies of perennial shrubs to assess the extent of biotic and abiotic processes and the heterogeneity of soil properties in arid shrublands. Results showed higher saturated conductivity under vegetation regardless of surface age, but it was more conspicuous on older, developed soils. At proximal locations to the shrub, bulk density, soil structure grade, silt, and clay content significantly increased radially from the canopy, while sand and organic material decreased. Soil properties at distal locations 2-5 times the canopy radius had no significant spatial correlation. The extent of the biotic influence of the shrub was 1.34 ± 0.32 times the canopy radius. Hydraulic properties were weakly correlated in space, but 75% of the variance could be attributed to sand content, soil structure grade, mean-particle diameter, and soil organic material, none of which are exclusively biotic or abiotic. The fast cyclic biotic processes occurring under vegetation are clearly overprinted on slow cumulative abiotic processes, resulting in the deterministic variability observed at the plant scale.

The Impact of Rainfall on Soil Moisture Dynamics in a Foggy Desert.

PubMed

Li, Bonan; Wang, Lixin; Kaseke, Kudzai F; Li, Lin; Seely, Mary K

2016-01-01

Soil moisture is a key variable in dryland ecosystems since it determines the occurrence and duration of vegetation water stress and affects the development of weather patterns including rainfall. However, the lack of ground observations of soil moisture and rainfall dynamics in many drylands has long been a major obstacle in understanding ecohydrological processes in these ecosystems. It is also uncertain to what extent rainfall controls soil moisture dynamics in fog dominated dryland systems. To this end, in this study, twelve to nineteen months' continuous daily records of rainfall and soil moisture (from January 2014 to August 2015) obtained from three sites (one sand dune site and two gravel plain sites) in the Namib Desert are reported. A process-based model simulating the stochastic soil moisture dynamics in water-limited systems was used to study the relationships between soil moisture and rainfall dynamics. Model sensitivity in response to different soil and vegetation parameters under diverse soil textures was also investigated. Our field observations showed that surface soil moisture dynamics generally follow rainfall patterns at the two gravel plain sites, whereas soil moisture dynamics in the sand dune site did not show a significant relationship with rainfall pattern. The modeling results suggested that most of the soil moisture dynamics can be simulated except the daily fluctuations, which may require a modification of the model structure to include non-rainfall components. Sensitivity analyses suggested that soil hygroscopic point (sh) and field capacity (sfc) were two main parameters controlling soil moisture output, though permanent wilting point (sw) was also very sensitive under the parameter setting of sand dune (Gobabeb) and gravel plain (Kleinberg). Overall, the modeling results were not sensitive to the parameters in non-bounded group (e.g., soil hydraulic conductivity (Ks) and soil porosity (n)). Field observations, stochastic modeling results as well as sensitivity analyses provide soil moisture baseline information for future monitoring and the prediction of soil moisture patterns in the Namib Desert.

The Impact of Rainfall on Soil Moisture Dynamics in a Foggy Desert

PubMed Central

Li, Bonan; Wang, Lixin; Kaseke, Kudzai F.; Li, Lin; Seely, Mary K.

2016-01-01

Soil moisture is a key variable in dryland ecosystems since it determines the occurrence and duration of vegetation water stress and affects the development of weather patterns including rainfall. However, the lack of ground observations of soil moisture and rainfall dynamics in many drylands has long been a major obstacle in understanding ecohydrological processes in these ecosystems. It is also uncertain to what extent rainfall controls soil moisture dynamics in fog dominated dryland systems. To this end, in this study, twelve to nineteen months’ continuous daily records of rainfall and soil moisture (from January 2014 to August 2015) obtained from three sites (one sand dune site and two gravel plain sites) in the Namib Desert are reported. A process-based model simulating the stochastic soil moisture dynamics in water-limited systems was used to study the relationships between soil moisture and rainfall dynamics. Model sensitivity in response to different soil and vegetation parameters under diverse soil textures was also investigated. Our field observations showed that surface soil moisture dynamics generally follow rainfall patterns at the two gravel plain sites, whereas soil moisture dynamics in the sand dune site did not show a significant relationship with rainfall pattern. The modeling results suggested that most of the soil moisture dynamics can be simulated except the daily fluctuations, which may require a modification of the model structure to include non-rainfall components. Sensitivity analyses suggested that soil hygroscopic point (sh) and field capacity (sfc) were two main parameters controlling soil moisture output, though permanent wilting point (sw) was also very sensitive under the parameter setting of sand dune (Gobabeb) and gravel plain (Kleinberg). Overall, the modeling results were not sensitive to the parameters in non-bounded group (e.g., soil hydraulic conductivity (Ks) and soil porosity (n)). Field observations, stochastic modeling results as well as sensitivity analyses provide soil moisture baseline information for future monitoring and the prediction of soil moisture patterns in the Namib Desert. PMID:27764203

Automated Microbial Metabolism Laboratory

NASA Technical Reports Server (NTRS)

1971-01-01

The effect of several environmental parameters on previously developed life detection systems is explored. Initial attempts were made to conduct all the experiments in a moist mode (high soil volume to water volume ratio). However, only labeled release and measurement of ATP were found to be feasible under conditions of low moisture. Therefore, these two life detection experiments were used for most of the environmental effects studies. Three soils, Mojave (California desert), Wyaconda (Maryland, sandy loam) and Victoria Valley (Antarctic desert) were generally used throughout. The environmental conditions studied included: incubation temperature 3 C to 80 C, ultraviolet irradiation of soils, variations in soil/liquid ratio, specific atmospheric gases, various antimetabolites, specific substrates, and variation in pH. An experiment designed to monitor nitrogen metabolism was also investigated.

Deficit irrigation of a landscape halophyte for reuse of saline waste water in a desert city

USGS Publications Warehouse

Glenn, E.P.; Mckeon, C.; Gerhart, V.; Nagler, P.L.; Jordan, F.; Artiola, J.

2009-01-01

Saline waste waters from industrial and water treatment processes are an under-utilized resource in desert urban environments. Management practices to safely use these water sources are still in development. We used a deeprooted native halophyte, Atriplex lentiformis (quailbush), to absorb mildly saline effluent (1800 mg l-1 total dissolved solids, mainly sodium sulfate) from a water treatment plant in the desert community of Twentynine Palms, California. We developed a deficit irrigation strategy to avoid discharging water past the root zone to the aquifer. The plants were irrigated at about one-third the rate of reference evapotranspiration (ETo) calculated from meteorological data over five years and soil moisture levels were monitored to a soil depth of 4.7 m at monthly intervals with a neutron hydroprobe. The deficit irrigation schedule maintained the soil below field capacity throughout the study. Water was presented on a more or less constant schedule, so that the application rates were less than ETo in summer and equal to or slightly greater than ETo in winter, but the plants were able to consume water stored in the profile in winter to support summer ET. Sodium salts gradually increased in the soil profile over the study but sulfate levels remained low, due to formation of gypsum in the calcic soil. The high salt tolerance, deep roots, and drought tolerance of desert halophytes such as A. lentiformis lend these plants to use as deficit-irrigated landscape plants for disposal of effluents in urban setting when protection of the aquifer is important. ?? 2008 Elsevier B.V.

Analysis of Desert Shrubs along First-Order Channels on the Desert Piedmonts: Possible Indicators of Ecosystem Health and Historic Variation - (SEED Project)

DTIC Science & Technology

2005-06-06

sapwood area is usually consistent (Pataki et al., 2000; Smith et al., 1995 missing). This relation suggests that larger trees may be susceptible to... area , since leaf- area to sapwood areas are usually consistent. Larger trees along higher order channels, therefore, may prove to be more sensitive to...measurements of bulk soil electrical conductivity to measure soil moisture and possible anthropogenic effects over large areas as long as

Analytical results and sample locality map for rock, stream-sediment, and soil samples, Northern and Eastern Coloado Desert BLM Resource Area, Imperial, Riverside, and San Bernardino Counties, California

USGS Publications Warehouse

King, Harley D.; Chaffee, Maurice A.

2000-01-01

INTRODUCTION In 1996-1998 the U.S. Geological Survey (USGS) conducted a geochemical study of the Bureau of Land Management's (BLM) 5.5 million-acre Northern and Eastern Colorado Desert Resource Area (usually referred to as the NECD in this report), Imperial, Riverside, and San Bernardino Counties, southeastern California (figure 1). This study was done in support of the BLM's Coordinated Management Plan for the area. This report presents analytical data from this study. To provide comprehensive coverage of the NECD, we compiled and examined all available geochemical data, in digital form, from previous studies in the area, and made sample-site plots to aid in determining where sample-site coverage and analyses were sufficient, which samples should be re-analyzed, and where additional sampling was needed. Previous investigations conducted in parts of the current study area included the National Uranium Resource Evaluation (NURE) program studies of the Needles and Salton Sea 1? x 2? quadrangles; USGS studies of 12 BLM Wilderness Study Areas (WSAs) (Big Maria Mountains, Chemehuevi Mountains, Chuckwalla Mountains, Coxcomb Mountains, Mecca Hills, Orocopia Mountains, Palen-McCoy, Picacho Peak, Riverside Mountains, Sheephole Valley (also known as Sheep Hole/Cadiz), Turtle Mountains, and Whipple Mountains); and USGS studies in the Needles and El Centro 1? x 2? quadrangles done during the early 1990s as part of a project to identify the regional geochemistry of southern California. Areas where we did new sampling of rocks and stream sediments are mainly in the Chocolate Mountain Aerial Gunnery Range and in Joshua Tree National Park, which extends into the west-central part of the NECD, as shown in figure 1 and figure 2. This report contains analytical data for 132 rock samples and 1,245 stream-sediment samples collected by the USGS, and 362 stream-sediment samples and 189 soil samples collected during the NURE program. All samples are from the Northern and Eastern Colorado Desert BLM Resource Area and vicinity. Included in the 1,245 stream-sediment samples collected by the USGS are 284 samples collected as part of the current study, 817 samples collected as part of investigations of the12 BLM WSAs and re-analyzed for the present study, 45 samples from the Needles 1? X 2? quadrangle, and 99 samples from the El Centro 1? X 2? quadrangle. The NURE stream-sediment and soil samples were re-analyzed as part of the USGS study in the Needles quadrangle. Analytical data for samples from the Chocolate Mountain Aerial Gunnery Range, which is located within the area of the NECD, were previously reported (King and Chaffee, 1999a). For completeness, these results are also included in this report. Analytical data for samples from the area of Joshua Tree National Park that is within the NECD have also been reported (King and Chaffee, 1999b). These results are not included in this report. The analytical data presented here can be used for baseline geochemical, mineral resource, and environmental geochemical studies.

Cyanobacteria and cyanotoxins are present in drinking water impoundments and groundwater wells in desert environments.

PubMed

Chatziefthimiou, Aspassia D; Metcalf, James S; Glover, W Broc; Banack, Sandra A; Dargham, Soha R; Richer, Renee A

2016-05-01

Desert environments and drylands experience a drastic scarcity of water resources. To alleviate dependence on freshwater for drinking water needs, countries have invested in infrastructure development of desalination plants. Collectively, the countries of the Arabian Gulf produce 45% of the world's desalinated water, which is stored in dams, mega-reservoirs and secondary house water tanks to secure drinking water beyond daily needs. Improper storage practices of drinking water in impoundments concomitant with increased temperatures and light penetration may promote the growth of cyanobacteria and accumulation of cyanotoxins. To shed light on this previously unexplored research area in desert environments, we examined drinking and irrigation water of urban and rural environments to determine whether cyanobacteria and cyanotoxins are present, and what are the storage and transportation practices as well as the environmental parameters that best predict their presence. Cyanobacteria were present in 80% of the urban and 33% of the rural water impoundments. Neurotoxins BMAA, DAB and anatoxin-a(S) were not detected in any of the water samples, although they have been found to accumulate in the desert soils, which suggests a bioaccumulation potential if they are leached into the aquifer. A toxic BMAA isomer, AEG, was found in 91.7% of rural but none of the urban water samples and correlated with water-truck transportation, light exposure and chloride ions. The hepatotoxic cyanotoxin microcystin-LR was present in the majority of all sampled impoundments, surpassing the WHO provisional guideline of 1 μg/l in 30% of the urban water tanks. Finally, we discuss possible management strategies to improve storage and transportation practices in order to minimize exposure to cyanobacteria and cyanotoxins, and actions to promote sustainable use of limited water resources. Copyright © 2016 Elsevier Ltd. All rights reserved.

Improved Instrument for Detecting Water and Ice in Soil

NASA Technical Reports Server (NTRS)

Buehler, Martin; Chin, Keith; Keymeulen, Didler; McCann, Timothy; Seshadri, Suesh; Anderson, Robert

2009-01-01

An instrument measures electrical properties of relatively dry soils to determine their liquid water and/or ice contents. Designed as a prototype of instruments for measuring the liquid-water and ice contents of lunar and planetary soils, the apparatus could also be utilized for similar purposes in research and agriculture involving terrestrial desert soils and sands, and perhaps for measuring ice buildup on aircraft surfaces. This instrument is an improved version of the apparatus described in Measuring Low Concentrations of Liquid Water and Ice in Soil (NPO-41822), NASA Tech Briefs, Vol. 33, No. 2 (February 2009), page 22. The designs of both versions are based on the fact that the electrical behavior of a typical soil sample is well approximated by a network of resistors and capacitors in which resistances decrease and capacitances increase (and the magnitude and phase angle of impedance changes accordingly) with increasing water content. The previous version included an impedance spectrometer and a jar into which a sample of soil was placed. Four stainless-steel screws at the bottom of the jar were used as electrodes of a fourpoint impedance probe connected to the spectrometer. The present instrument does not include a sample jar and can be operated without acquiring or handling samples. Its impedance probe consists of a compact assembly of electrodes housed near the tip of a cylinder. The electrodes protrude slightly from the cylinder (see Figure 1). In preparation for measurements, the cylinder is simply pushed into the ground to bring the soil into contact with the electrodes.

A mechanistic modeling and data assimilation framework for Mojave Desert ecohydrology

USGS Publications Warehouse

Ng, Gene-Hua Crystal.; Bedford, David; Miller, David

2014-01-01

This study demonstrates and addresses challenges in coupled ecohydrological modeling in deserts, which arise due to unique plant adaptations, marginal growing conditions, slow net primary production rates, and highly variable rainfall. We consider model uncertainty from both structural and parameter errors and present a mechanistic model for the shrub Larrea tridentata (creosote bush) under conditions found in the Mojave National Preserve in southeastern California (USA). Desert-specific plant and soil features are incorporated into the CLM-CN model by Oleson et al. (2010). We then develop a data assimilation framework using the ensemble Kalman filter (EnKF) to estimate model parameters based on soil moisture and leaf-area index observations. A new implementation procedure, the “multisite loop EnKF,” tackles parameter estimation difficulties found to affect desert ecohydrological applications. Specifically, the procedure iterates through data from various observation sites to alleviate adverse filter impacts from non-Gaussianity in small desert vegetation state values. It also readjusts inconsistent parameters and states through a model spin-up step that accounts for longer dynamical time scales due to infrequent rainfall in deserts. Observation error variance inflation may also be needed to help prevent divergence of estimates from true values. Synthetic test results highlight the importance of adequate observations for reducing model uncertainty, which can be achieved through data quality or quantity.

Compositions of modern dust and surface sediments in the Desert Southwest, United States

USGS Publications Warehouse

Reheis, M.C.; Budahn, J.R.; Lamothe, P.J.; Reynolds, R.L.

2009-01-01

Modern dusts across southwestern United States deserts are compositionally similar to dust-rich Av soil horizons (depths of 0-0.5 cm and 1-4 cm at 35 sites) for common crustal elements but distinctly different for some trace elements. Chemical compositions and magnetic properties of the soil samples are similar among sites relative to dust sources, geographic areas, and lithologic substrates. Exceptions are Li, U, and W, enriched in Owens Valley, California, and Mg and Sr, enriched in soils formed on calcareous fan gravel in southeast Nevada. The Av horizons are dominated by dust and reflect limited mixing with substrate sediments. Modern dust samples are also similar across the region, except that Owens Valley dusts are higher in Mg, Ba, and Li and dusts both there and at sites to the north on volcanic substrates are higher in Sb and W. Thus, dust and Av horizons consist of contributions from many different sources that are well mixed before deposition. Modern dusts contain significantly greater amounts of As, Cd, Cr, Cu, Ni, Pb, and Sb than do Av horizons, which record dust additions over hundreds to thousands of years. These results suggest that modern dust compositions are influenced by anthropogenic sources and emissions from Owens (dry) Lake after its artificial desiccation in 1926. Both modern dusts and Av horizons are enriched in As, Ba, Cu, Li, Sb, Th, U, and W relative to average crustal composition, which we interpret to indicate that the geologic sources of dust in the southwestern United States are geochemically distinctive.

Modification of REE distribution of ordinary chondrites from Atacama (Chile) and Lut (Iran) hot deserts: Insights into the chemical weathering of meteorites

NASA Astrophysics Data System (ADS)

Pourkhorsandi, Hamed; D'Orazio, Massimo; Rochette, Pierre; Valenzuela, Millarca; Gattacceca, Jérôme; Mirnejad, Hassan; Sutter, Brad; Hutzler, Aurore; Aboulahris, Maria

2017-09-01

The behavior of rare earth elements (REEs) during hot desert weathering of meteorites is investigated. Ordinary chondrites (OCs) from Atacama (Chile) and Lut (Iran) deserts show different variations in REE composition during this process. Inductively coupled plasma-mass spectrometry (ICP-MS) data reveal that hot desert OCs tend to show elevated light REE concentrations, relative to OC falls. Chondrites from Atacama are by far the most enriched in REEs and this enrichment is not necessarily related to their degree of weathering. Positive Ce anomaly of fresh chondrites from Atacama and the successive formation of a negative Ce anomaly with the addition of trivalent REEs are similar to the process reported from Antarctic eucrites. In addition to REEs, Sr and Ba also show different concentrations when comparing OCs from different hot deserts. The stability of Atacama surfaces and the associated old terrestrial ages of meteorites from this region give the samples the necessary time to interact with the terrestrial environment and to be chemically modified. Higher REE contents and LREE-enriched composition are evidence of contamination by terrestrial soil. Despite their low degrees of weathering, special care must be taken into account while working on the REE composition of Atacama meteorites for cosmochemistry applications. In contrast, chondrites from the Lut desert show lower degrees of REE modification, despite significant weathering signed by Sr content. This is explained by the relatively rapid weathering rate of the meteorites occurring in the Lut desert, which hampers the penetration of terrestrial material by forming voluminous Fe oxide/oxyhydroxides shortly after the meteorite fall.

Threshold Velocity for Saltation Activity in the Taklimakan Desert

NASA Astrophysics Data System (ADS)

Yang, Xinghua; He, Qing; Matimin, Ali; Yang, Fan; Huo, Wen; Liu, Xinchun; Zhao, Tianliang; Shen, Shuanghe

2017-12-01

The threshold velocity is an indicator of a soil's susceptibility to saltation activity and is also an important parameter in dust emission models. In this study, the saltation activity, atmospheric conditions, and soil conditions were measured from 1 August 2008 to 31 July 2009 in the Taklimakan Desert, China. the threshold velocity was estimated using the Gaussian time fraction equivalence method. At 2 m height, the 1-min averaged threshold velocity varied between 3.5 and 10.9 m/s, with a mean of 5.9 m/s. Threshold velocities varying between 4.5 and 7.5 m/s accounted for about 91.4% of all measurements. The average threshold velocity displayed clear seasonal variations in the following sequence: winter (5.1 m/s) < autumn (5.8 m/s) < spring (6.1 m/s) < summer (6.5 m/s). A regression equation of threshold velocity was established based on the relations between daily mean threshold velocity and air temperature, specific humidity, and soil volumetric moisture content. High or moderate positive correlations were found between threshold velocity and air temperature, specific humidity, and soil volumetric moisture content (air temperature r = 0.75; specific humidity r = 0.59; and soil volumetric moisture content r = 0.55; sample size = 251). In the study area, the observed horizontal dust flux was 4198.0 kg/m during the whole period of observation, while the horizontal dust flux calculated using the threshold velocity from the regression equation was 4675.6 kg/m. The correlation coefficient between the calculated result and the observations was 0.91. These results indicate that atmospheric and soil conditions should not be neglected in parameterization schemes for threshold velocity.

A Comparison of One-Dimensional Hydrologic Models Using Soil Moisture Observations under Urban Irrigation in a Desert Climate

NASA Astrophysics Data System (ADS)

Volo, T. J.; Vivoni, E. R.; Martin, C. A.; Wang, Z.; Ruddell, B.

2012-12-01

Through the past several decades, rapid population growth in the arid American Southwest has dramatically changed patterns of plant-available water through municipal and residential irrigation systems that provide supplemental water to designed and managed urban landscape vegetation. Urban irrigation, including diversion of rainwater and addition of imported water, has thereby enabled the transformation of areas once covered by bare soil and low water-use, native desert plant species to large tracts of exotic, high water-use turf grass and shade trees. Despite the large percentage of residential water appropriated to irrigation purposes, models of urban hydrology often fail to include the impact that this anthropogenic input has on water, energy, and biomass conditions. This study utilizes two one-dimensional soil moisture models to examine the importance of representing different processes in a quantitative urban ecohydrology model under irrigation scenarios. Such processes include sub-daily energy fluxes, vertical redistribution of soil moisture, saturation- and infiltration-excess runoff mechanisms, seasonally variable irrigation scheduling, and soil moisture control on evapotranspiration rates. The analysis is informed by soil moisture observations from an experimental sensor network in the Phoenix, Arizona metropolitan area. The network includes data from several different landscape and irrigation treatments representative of pre- and post-development conditions in the region. By interpreting soil moisture levels in terms of plant water stress, this study analyzes the effectiveness of urban irrigation practices in arid climates. Furthermore, by identifying the necessary hydrologic processes to represent in an urban ecohydrology model, our results inform future work in adapting a distributed hydrologic model to desert urban settings where irrigation plays a significant role in minimizing plant water stress. An appropriate model of water and energy balances, calibrated using local meteorological forcing, can facilitate discussions with water managers and homeowners regarding optimal irrigation frequency, volume, duration, and seasonality for individual landscapes, while also aiding in water-efficient landscape design for growing cities in desert regions.

A survey of the microbial community in the rhizosphere of two dominant shrubs of the Negev Desert highlands, Zygophyllum dumosum (Zygophyllaceae) and Atriplex halimus (Amaranthaceae), using cultivation-dependent and cultivation-independent methods.

PubMed

Kaplan, Drora; Maymon, Maskit; Agapakis, Christina M; Lee, Andrew; Wang, Andrew; Prigge, Barry A; Volkogon, Mykola; Hirsch, Ann M

2013-09-01

Plant roots comprise more than 50% of the plant's biomass. Part of that biomass includes the root microbiome, the assemblage of bacteria and fungi living in the 1-3 mm region adjacent to the external surface of the root, the rhizosphere. We hypothesized that the microorganisms living in the rhizosphere and in bulk soils of the harsh environment of the Negev Desert of Israel had potential for use as plant-growth-promoting bacteria (PGPB) to improve plant productivity in nutrient-poor, arid soils that are likely to become more common as the climate changes. • We used cultivation-dependent methods including trap experiments with legumes to find nitrogen-fixing rhizobia, specialized culture media to determine iron chelation via siderophores and phosphate-solubilizing and cellulase activities; cultivation-independent methods, namely 16S rDNA cloning and sequencing; and also community-level physiological profiling to discover soil microbes associated with the Negev desert perennials Zygophyllum dumosum and Atriplex halimus during the years 2009-2010. • We identified a number of PGPB, both epiphytes and endophytes, which fix nitrogen, chelate iron, solubilize phosphate, and secrete cellulase, as well as many other bacteria and some fungi, thereby providing a profile of the microbiomes that support the growth of two desert perennials. • We generated a snapshot of the microbial communities in the Negev Desert, giving us an insight in its natural state. This desert, like many arid environments, is vulnerable to exploitation for other purposes, including solar energy production and dry land farming.

Biogeography of soil organic matter molecular structure across multiple soil size fractions

NASA Astrophysics Data System (ADS)

Meier, C. L.; Neff, J.

2009-12-01

Recent work suggests that there is a common soil decomposition sequence whereby plant inputs are metabolized into a physiologically constrained set of compounds originating from microbes that may persist in soil over relatively long time-scales. Plant inputs tend to be found in coarse particulate fractions (>180 μm) with relatively fast turnover times, while microbially derived compounds tend to accrue in the finer silt + clay fractions (<53 μm) with relatively long turnover times. To investigate whether a common decomposition sequence exists, we used pyrolysis gas chromatography/mass spectrometry (py-GC/MS) to characterize the molecular structure of soil organic matter (SOM) in three size fractions (590-180 μm, 180-53 μm, and <53 μm), using soils sampled from multiple biomes (alpine tundra, sub-alpine forest, boreal forest, temperate coniferous, temperate deciduous, dry desert/savannah, and tropical forest). We hypothesized that: 1) regardless of biome, fractions >180 μm would be chemically similar, and would be characterized by lignin and other plant-derived compounds; and 2) fractions <53 μm would also be similar across biomes but would be dominated by microbially-derived compounds like polysaccharides. Across all biomes, we found that there was significantly less lignin in <53 μm fractions compared to >180 μm fractions (p<0.0001), providing some support for the idea that plant material is not incorporated into soil C pools with relatively long turnover times. However, a principal components analysis (PCA) showed that the >180 μm coarse particulate fractions also contained compounds associated with microbial origins, indicating that microbial C is not limited to <53 μm size fractions. The PCA also revealed that samples within each of the three size fractions did not cluster together (i.e. they did not share a common molecular structure), but we did note that: 1) cold alpine and sub-alpine sites were unique and chemically similar; and 2) tropical forest soils were unique and chemically similar. Moreover, we observed large differences in molecular structure for dry desert/savannah sites with varying vegetation types (trees vs. grass) and varying geologic substrates. Taken together, these observations argue that temperature, vegetation, and underlying geology influence soil molecular structure, but support for a common decomposition sequence is mixed.

Atacama Desert: Determination of two new extremophilic microbial model systems for space exploration and astrobiology studies - data from a large-scale transect study

NASA Astrophysics Data System (ADS)

Boy, Diana; Godoy, Roberto; Guggenberger, Georg; Möller, Ralf; Boy, Jens

2017-04-01

The hyper-arid region of Yungay in the Atacama Desert in Chile is believed to be the driest place on Earth thus harboring the most desiccation-resistant microorganisms. Hence the search for new extremophilic model organisms is traditionally limited to this rather narrow strip. However, it is not clear whether Yungay is indeed the most arid place, as this should be the one with the lowest soil organic carbon (SOC) stock and soil water (SW) content. Therefore we tested soil samples from a humidity-gradient transect with comparable sites (inclination, location in the rain shadow of the coastal mountain range, 100 km distance between the sites) spanning roughly 600 km in the Atacama Desert for SOC stocks and SW content. We found, that SOC stocks decreased with aridity from 25.5 to 2.1 kg m-2 cm-1, while the SW contents decreased at 5 of our sites and increased in the hyper-arid zone. To our surprise, we identified two sites located 100 km north and south of Yungay which had substantially lower (1.92 ± 0.73 kg m-2 cm-1) or slightly higher (2.39 ± 1.2 kg m-2 cm-1) SOC stocks than Yungay (2.21 ± 0.75 kg m-2 cm-1), but with 0.043 ± 0.03 g respectively 0.0033 ± 0.0016 g of water per 1 g of soil comparable or substantially lower SW contents, while Yungay has 0.043 ± 0.06 g. Thus we consider these sites to display different growth conditions and ecological niches compared to Yungay and therefore as promising candidate sites for the identification of new species of polyextremophilic radiation-resistant microorganisms, as the resistance against desiccation is paired with a distinct resistance to ionizing radiation due to same microbial DNA repair mechanisms. Soil samples were irradiated with high doses of gamma radiation up to 25 000 Gy. Surviving colonies were cultivated on a medium favoring the growth of Deinococcus-like species, currently the most radiation-resistant organisms on Earth, and their affiliation was determined using 16SrRNA next generation sequencing. Here, we discuss the hypothesis of ecological niching even at the most hyper-arid places of our planet on grounds of our recently identified sites - with implications for life-detection missions in hyper-arid Martian regolith.

Field-Measured Infiltration Properties of Mojave Desert Soils

NASA Astrophysics Data System (ADS)

Perkins, K. S.; Nimmo, J. R.; Winfield, K. A.; Schmidt, K. M.; Miller, D. M.; Stock, J. D.; Singha, K.

2005-12-01

Characteristics typical of alluvial desert soils, such as depositional stratification, desert pavement, biotic crusts, and vesicular horizons strongly influence soil moisture and its variability. Knowledge of infiltration capacity, water retention, and unsaturated hydraulic conductivity is central to the assessment of water availability to plants and animals after infiltration events. These hydraulic parameters are directly related to the degree of soil development. The frequency and magnitude of storm events in conjunction with degree of soil development also affect runoff and erosion. Our purpose is to examine field soil-water behavior and determine unsaturated hydraulic properties needed for large-scale modeling of soil moisture. The results of this study will be used in conjunction with surficial geologic mapping of the Mojave Desert in evaluations of ecological habitat quality. We conducted infiltration/redistribution experiments on three different-aged deposits in the Mojave National Preserve: (1) recently deposited wash sediments, (2) a soil of early Holocene age, and (3) a highly developed soil of late Pleistocene age. In each experiment we ponded water in a 1-m-diameter infiltration ring for 2.3 hr. For several weeks we monitored water content and matric pressure to depths of 1.5 m, and distances of 6 m from the infiltration ring. Measuring techniques included surface electrical resistance tomography, dielectric-constant probes, heat-dissipation probes, and tensiometers. Analysis of the subsurface measurements using an instantaneous-profile technique gives the retention and K properties that will be used in predictive modeling. In each experiment the infiltration rate was nearly constant in time, with infiltration capacity 4 times greater in the youngest than in the oldest soil. Average infiltration flux densities within the ring during the period of ponding were 0.80 m/hr in the active wash, 0.45 m/hr in the Holocene soil, and 0.21 m/hr in the Pleistocene soil. All three deposits have significant gravel (30-70% within the uppermost 1.5 m) with the percentage of silt and clay increasing with deposit age. The low infiltration capacity in the oldest soil is consistent with the presence of the more highly developed vesicular horizon and accumulation of illuvial silt. Depositional stratification in the active wash did not impede downward flow to the same degree as in the early Holocene-age soil, which has some soil horizon development and sparse biotic crust. Infiltrated water spread laterally to at least 1 m beyond the ring perimeter at all sites; the presence of a buried clay-rich horizon in the active wash enhanced spreading at depth to 2 m.

Who's hot, who's not? Effects of concentrating solar power heliostats on soil temperature at Ivanpah Solar Electric Generating System, Mojave Desert, USA

NASA Astrophysics Data System (ADS)

Grodsky, S.; Hernandez, R. R.

2017-12-01

Solar energy development may function as a contemporary, anthropogenic driver of disturbance when sited in natural ecosystems. Orientation and density of solar modules, including heliostats at concentrating solar power (CSP) facilities, may affect soils via shading and altered surface-water flow. Meanwhile, soil attributes like temperature and moisture may affect nutrient cycling, plant germination and growth, and soil biota. We tested effects of CSP heliostats on soil temperature at Ivanpah Solar Electric Generating System (ISEGS) in the Mojave Desert, USA. We implemented experimental treatments based on preconstruction rare plant [e.g., Mojave milkweed (Asclepias nyctaginifolia)] protection areas (hereafter "halos"), site preparation activities, and heliostat density throughout three, replicated CSP blocks (i.e., tower and associated heliostats), including: (1) No Halos (Bladed) - high site preparation intensity, high heliostat density immediately surrounding towers; (2) No Halos (Mowed) - moderate site preparation intensity, moderate to low heliostat density as distance increases from towers; and (3) Halos - no site preparation, no heliostats. We also established control sites within 1,600 km of ISEGS in undisturbed desert. We observed significant differences in soil temperature across treatments. We recorded significantly lower soil temperatures in the No Halos (Bladed) treatments (26.7°C) and No Halos (Mowed) treatments (29.9°C) than in the Halos treatments (32.9°C) and controls (32.1°C). We also determined that soil temperatures in the Halos treatments and controls did not significantly differ. Our results indicated that shading from high-density heliostat configuration significantly reduced soil temperature relative to low-density heliostat configuration and areas without CSP. Shading from heliostats and consequential fluctuation in soil temperatures may affect local-scale distribution of flora and fauna, leading to altered "bottom-up" ecological interactions at ISEGS.

Distribution of desert varnish in Arizona

NASA Technical Reports Server (NTRS)

Elvidge, Christopher D.

1989-01-01

Desert varnish is the dark coat of clay and ferromanganese oxides developed on exposed rock surfaces in arid regions. It forms from the accretion of material from windblown dust. The distribution of desert varnish was mapped in Arizona. It was discovered that desert varnish could be mapped on a regional scale. Well developed desert varnish is common on stable rock surfaces in areas having alkaline soils and less than about 25 cm of annual precipitation. Rock surfaces in areas having more than 40 cm of annual precipitation are generally devoid of desert varnish. An experiment was conducted with varnished desert pavement stone. The stones were broken in half and half was set on a roof in central Illinois from April until October. Removed from the alkaline desert environment, it only took seven months for the varnish to develop an eroded appearance. This experiment graphically illustrates the dependency of desert varnish on alkalinity. In this context, the zones of eroded desert varnish in Arizona indicate that the area of active desert varnish formation has fluctuated, expanding in drier times and contracting/eroding in wetter times.

Desert dust hazards: A global review

NASA Astrophysics Data System (ADS)

Middleton, N. J.

2017-02-01

Dust storms originate in many of the world's drylands and frequently present hazards to human society, both within the drylands themselves but also outside drylands due to long-range transport of aeolian sediments. Major sources of desert dust include the Sahara, the Middle East, central and eastern Asia, and parts of Australia, but dust-raising occurs all across the global drylands and, on occasion, beyond. Dust storms occur throughout the year and they vary in frequency and intensity over a number of timescales. Long-range transport of desert dust typically takes place along seasonal transport paths. Desert dust hazards are here reviewed according to the three phases of the wind erosion system: where dust is entrained, during the transport phase, and on deposition. This paper presents a synthesis of these hazards. It draws on empirical examples in physical geography, medical geology and geomorphology to discuss case studies from all over the world and in various fields. These include accelerated soil erosion in agricultural zones - where dust storms represent a severe form of accelerated soil erosion - the health effects of air pollution caused by desert aerosols via their physical, chemical and biological properties, transport accidents caused by poor visibility during desert dust events, and impacts on electricity generation and distribution. Given the importance of desert dust as a hazard to human societies, it is surprising to note that there have been relatively few attempts to assess their impact in economic terms. Existing studies in this regard are also reviewed, but the wide range of impacts discussed in this paper indicates that desert dust storms deserve more attention in this respect.

Seed banks in desert grasslands and implications for management with an application to education and outreach

NASA Astrophysics Data System (ADS)

Ortiz-Barney, Elena

Large areas of desert grasslands in the southwestern United States have been converted to shrublands through mismanagement. Land managers are interested in the potential for restoring these areas to grasslands. One possible source of new individuals of desirable grasses is the soil seed bank. This study was designed to investigate the quantity and spatial distribution of seeds in the soil seed bank and to estimate the possible effects of fire on the seed bank. To investigate the seed bank, soil samples were collected from sites with different vegetative cover representing a range of grassland conditions. At each site samples were collected from 3 microsites (under grasses, under shrubs, and interspaces) and separated into 3 depths (litter, 0--2 cm and 2--5 cm). Samples were grown in a growth chamber and plants were identified after emergence and flowering. To investigate the effects of prescribed burns on the seed bank, soil and surface temperatures during burns were measured at each microsite. Also, the heat tolerance of seeds of 8 species of perennial grasses was assessed by quantifying germination rates across a temperature gradient. Eleven species of perennial grasses germinated from soil and litter samples. Only 5 were abundant: the exotics Eragrostis curvula and E. Lehmanniana, and the natives E. intermedia, Lycurus setosus and Sporobolus cryptandrus. Most seed, as well as highest species richness, occurred in the litter layer and under shrubs. Temperatures during prescribed burns were highest in these same microsites, reaching averages between 100° and 250° Celsius (C). None of the species tolerated temperatures above 100°C. The implication of these results is that most grass seed reserves are stored in microsites that are likely to experience temperatures above their heat tolerance. Land managers should take this into account as a possible risk associated with using prescribed burns as part of their restoration efforts. As an application of this work to education and outreach, a lesson plan on teaching plant community succession concepts is included. The lesson consists of a board game in which each student plays the role of an imaginary plant species. They explore the dynamics of the imaginary plant community as the species respond to disturbance events and to each other. Also included are the results of an evaluation on the effectiveness of the game as a teaching tool.

Development of bacterial communities in biological soil crusts along a revegetation chronosequence in the Tengger Desert, northwest China

NASA Astrophysics Data System (ADS)

Liu, Lichao; Liu, Yubing; Zhang, Peng; Song, Guang; Hui, Rong; Wang, Zengru; Wang, Jin

2017-08-01

Knowledge of structure and function of microbial communities in different successional stages of biological soil crusts (BSCs) is still scarce for desert areas. In this study, Illumina MiSeq sequencing was used to assess the compositional changes of bacterial communities in different ages of BSCs in the revegetation of Shapotou in the Tengger Desert. The most dominant phyla of bacterial communities shifted with the changed types of BSCs in the successional stages, from Firmicutes in mobile sand and physical crusts to Actinobacteria and Proteobacteria in BSCs, and the most dominant genera shifted from Bacillus, Enterococcus and Lactococcus to RB41_norank and JG34-KF-361_norank. Alpha diversity and quantitative real-time polymerase chain reaction (PCR) analysis indicated that bacterial richness and abundance reached their highest levels after 15 years of BSC development. Redundancy analysis showed that silt + clay content and total K were the prime determinants of the bacterial communities of BSCs. The results suggested that bacterial communities of BSCs recovered quickly with the improved soil physicochemical properties in the early stages of BSC succession. Changes in the bacterial community structure may be an important indicator in the biogeochemical cycling and nutrient storage in early successional stages of BSCs in desert ecosystems.

Quantifying soil surface change in degraded drylands: shrub encroachment and effects of fire and vegetation removal in a desert grassland

USGS Publications Warehouse

Sankey, Joel B.; Ravi, Sujith; Wallace, Cynthia S.A.; Webb, Robert H.; Huxman, Travis E.

2012-01-01

Woody plant encroachment, a worldwide phenomenon, is a major driver of land degradation in desert grasslands. Woody plant encroachment by shrub functional types ultimately leads to the formation of a patchy landscape with fertile shrub patches interspaced with nutrient-depleted bare soil patches. This is considered to be an irreversible process of land and soil degradation. Recent studies have indicated that in the early stages of shrub encroachment, when there is sufficient herbaceous connectivity, fires (prescribed or natural) might provide some reversibility to the shrub encroachment process by negatively affecting shrub demography and homogenizing soil resources across patches within weeks to months after burning. A comprehensive understanding of longer term changes in microtopography and spatial patterning of soil properties following fire in shrub-encroached grasslands is desirable. Here, we investigate the changes in microtopography with LiDAR (light detection and ranging), vegetation recovery, and spatial pattering of soil properties in replicated burned, clipped, and control areas in a shrub-grass transition zone in the northern Chihuahuan Desert four years after prescribed fire or clipping. Results indicate a greater homogeneity in soil, microtopography, and vegetation patterning on burned relative to clipped and control treatments. Findings provide further evidence that disturbance by prescribed fire may allow for reversal of the shrub encroachment process, if the event occurs in the early stages of the vegetation shift. Improved understanding of longer-term effects of fire and associated changes in soil patterning can inform the use and role of fire in the context of changing disturbance regimes and climate.

Satellite-based estimates of groundwater depletion in the Badain Jaran Desert, China

NASA Astrophysics Data System (ADS)

Jiao, Jiu Jimmy; Zhang, Xiaotao; Wang, Xusheng

2015-03-01

Despite prevailing dry conditions, groundwater-fed lakes are found among the earth's tallest sand dunes in the Badain Jaran Desert, China. Indirect evidence suggests that some lakes are shrinking. However, relatively few studies have been carried out to assess the regional groundwater conditions and the fate of the lakes due to the remoteness and severity of the desert environment. Here we use satellite information to demonstrate an ongoing slow decrease in both lake level and groundwater storage. Specifically, we use Ice, Cloud, and land Elevation Satellite altimetry data to quantify water levels of the lakes and show overall decreases from 2003 to 2009. We also use water storage changes from the Gravity Recovery and Climate Experiment and simulated soil and water changes from the Global Land Data Assimilation System to demonstrate long-term groundwater depletion in the desert. Rainfall increase driven by climate change has increased soil water and groundwater storage to a certain degree but not enough to compensate for the long-term decline. If countermeasures are not taken to control the pumping, many lakes will continue to shrink, causing an ecological and environmental disaster in the fragile desert oases.

Effect of soil texture and chemical properties on laboratory-generated dust emissions from SW North America

NASA Astrophysics Data System (ADS)

Mockford, T.; Zobeck, T. M.; Lee, J. A.; Gill, T. E.; Dominguez, M. A.; Peinado, P.

2012-12-01

Understanding the controls of mineral dust emissions and their particle size distributions during wind-erosion events is critical as dust particles play a significant impact in shaping the earth's climate. It has been suggested that emission rates and particle size distributions are independent of soil chemistry and soil texture. In this study, 45 samples of wind-erodible surface soils from the Southern High Plains and Chihuahuan Desert regions of Texas, New Mexico, Colorado and Chihuahua were analyzed by the Lubbock Dust Generation, Analysis and Sampling System (LDGASS) and a Beckman-Coulter particle multisizer. The LDGASS created dust emissions in a controlled laboratory setting using a rotating arm which allows particle collisions. The emitted dust was transferred to a chamber where particulate matter concentration was recorded using a DataRam and MiniVol filter and dust particle size distribution was recorded using a GRIMM particle analyzer. Particle size analysis was also determined from samples deposited on the Mini-Vol filters using a Beckman-Coulter particle multisizer. Soil textures of source samples ranged from sands and sandy loams to clays and silts. Initial results suggest that total dust emissions increased with increasing soil clay and silt content and decreased with increasing sand content. Particle size distribution analysis showed a similar relationship; soils with high silt content produced the widest range of dust particle sizes and the smallest dust particles. Sand grains seem to produce the largest dust particles. Chemical control of dust emissions by calcium carbonate content will also be discussed.

The influence of organic-containing soil dust on ice nucleation and cloud properties

NASA Astrophysics Data System (ADS)

Hummel, Matthias; Grini, Alf; Berntsen, Terje K.; Ekman, Annica

2017-04-01

Natural mineral dust from desert regions is known to be the most important contributor to atmospheric ice-nucleating particles (INP) which induce heterogeneous ice nucleation in mixed-phase clouds. Its ability to nucleate ice effectively is shown by various laboratory (Hoose and Möhler 2012) and field results (DeMott et al. 2015) and its abundance in ice crystal residuals has also been shown (Cziczo et al. 2013). Thus it is an important player when representing mixed-phase clouds in climate models. MODIS satellite data indicate that 1 /4 of the global dust emission originates from semi-arid areas rather than from arid deserts (Ginoux et al. 2012). Here, organic components can mix with minerals within the soil and get into the atmosphere. These so-called 'soil dust' particles are ice-nucleating active at high sub-zero temperatures, i.e. at higher temperatures than pure desert dust (Steinke et al. 2016). In this study, soil dust is incorporated into the Norwegian Earth System Model (NorESM, Bentsen et al. 2013) and applied to a modified ice nucleation parameterization (Steinke et al. 2016). Its influence on the cloud ice phase is evaluated by comparing a control run, where only pure desert dust is considered, and a sensitivity experiment, where a fraction of the dust emissions are classified as soil dust. Both simulations are nudged to ERA-interim meteorology and they have the same loading of dust emissions. NorESM gives a lower annual soil dust emission flux compared to Ginoux et al. (2012), but the desert dust flux is similar to the MODIS-retrieved data. Although soil dust concentrations are much lower than desert dust, the NorESM simulations indicate that the annual INP concentrations from soil dust are on average lower by a just a factor of 4 than INP concentrations from pure desert dust. The highest soil dust INP concentrations occur at a lower height than for desert dust, i.e at warmer temperatures inside mixed-phase clouds. Furthermore, soil dust INP distributes only to a small extent towards subtropical regions, but does not expand further poleward than desert dust INP. Due to the current setup, with simulations nudged to ERA-Interim meteorology, only small changes in the cloud variables are possible. However, the experiment still shows clear influences of soil dust INP on the cloud ice phase. Due to an increased number of ice particles in regions with T<-15˚ C, the formation of precipitation particles is larger. Bentsen, M., Bethke, I., Debernard, J. B., Iversen, T., Kirkevåg, A., Seland, Ø., Drange, H., Roelandt, C., Seierstad, I. A., Hoose, C., and Kristjánsson, J. E.: The Norwegian Earth System Model, NorESM1-M - Part 1: Description and basic evaluation of the physical climate, Geosci. Model Dev., 6, 687-720, 10.5194/gmd-6-687-2013, 2013. Cziczo, D. J., Froyd, K. D., Hoose, C., Jensen, E. J., Diao, M., Zondlo, M. A., Smith, J. B., Twohy, C. H., and Murphy, D. M.: Clarifying the Dominant Sources and Mechanisms of Cirrus Cloud Formation, Science, 340, 1320-1324, 10.1126/science.1234145, 2013. DeMott, P. J., Prenni, A. J., McMeeking, G. R., Sullivan, R. C., Petters, M. D., Tobo, Y., Niemand, M., Möhler, O., Snider, J. R., Wang, Z., and Kreidenweis, S. M.: Integrating laboratory and field data to quantify the immersion freezing ice nucleation activity of mineral dust particles, Atmos. Chem. Phys., 15, 393-409, 10.5194/acp-15-393-2015, 2015. Ginoux, P., Prospero, J. M., Gill, T. E., Hsu, N. C., and Zhao, M.: Global-scale attribution of anthropogenic and natural dust sources and their emission rates based on MODIS Deep Blue aerosol products, Reviews of Geophysics, 50, RG3005, 10.1029/2012RG000388, 2012. Hoose, C., and Möhler, O.: Heterogeneous ice nucleation on atmospheric aerosols: a review of results from laboratory experiments, Atmos. Chem. Phys., 12, 9817-9854, 10.5194/acp-12-9817-2012, 2012. Steinke, I., Funk, R., Busse, J., Iturri, A., Kirchen, S., Leue, M., Möhler, O., Schwartz, T., Schnaiter, M., Sierau, B., Toprak, E., Ullrich, R., Ulrich, A., Hoose, C., and Leisner, T.: Ice nucleation activity of agricultural soil dust aerosols from Mongolia, Argentina, and Germany, Journal of Geophysical Research: Atmospheres, n/a-n/a, 10.1002/2016JD025160, 2016.

Divergent Egg Physiologies in Two Closely Related Grasshopper Species: Taeniopoda eques versus Romalea microptera (Orthoptera: Romaleidae)

PubMed Central

STAUFFER, TIMOTHY W.; HATLE, JOHN D.; WHITMAN, DOUGLAS W.

2013-01-01

We compared egg survivorship and egg development time at different soil moistures for two closely related grasshopper species from divergent habitats: marsh-inhabiting Romalea microptera (Beauvois) versus desert-inhabiting Taeniopoda eques (Burmeister). These two species can interbreed and produce viable offspring. In nature, both species have a similar 8–9 mo subterranean egg stage, but their soil environments differ dramatically in water content. We predicted that the eggs of the two species would exhibit differential survivorship and development times under different moisture levels. Our laboratory results show that the eggs of both species survived a wide range of soil moistures (≈ 0.5 to 90%), maintained for 3 mo. However, the eggs of the marsh grasshopper, R. microptera, better tolerated the highest soil moistures (95 and 100%), whereas the eggs of the desert species, T. eques, better tolerated the lowest soil moistures (0.0 and 0.1%). Sixty-five percent of marsh-inhabiting R. microptera eggs, but no desert T. eques eggs, survived 3 mo submersion under water. In contrast, 49% of desert T. eques eggs, but only 3.5% of R. microptera eggs, survived after being laid into oven-dried sand and then maintained with no additional water until hatch. In the laboratory at 26°C, the two species differed significantly in the mean length of the oviposition-to-hatch interval: 176 d for R. microptera versus 237 d for T. eques. These divergent traits presumably benefit these insects in their divergent habitats. Our results suggest the evolution of physiological divergence that is consistent with adaptations to local environments. PMID:22182625

Oxidation of aliphatic, branched chain, and aromatic hydrocarbons by Nocardia cyriacigeorgica isolated from oil-polluted sand samples collected in the Saudi Arabian Desert.

PubMed

Le, Thi Nhi-Cong; Mikolasch, Annett; Awe, Susanne; Sheikhany, Halah; Klenk, Hans-Peter; Schauer, Frieder

2010-06-01

A soil bacterium isolated from oil-polluted sand samples collected in the Saudi Arabian Desert has been determined as Nocardia cyriacigeorgica, which has a high capacity of degrading and utilizing a broad range of hydrocarbons. The metabolic pathways of three classes of hydrocarbons were elucidated by identifying metabolites in cell-free extracts analyzed by GC/MS and HPLC/UV-Vis in comparison with standard compounds. During tetradecane oxidation, tetradecanol; tetradecanoic acid; dodecanoic acid; decanoic acid could be found as metabolites, indicating a monoterminal degradation pathway of n -alkanes. The oxidation of pristane resulted in the presence of pristanoic acid; 2-methylglutaric acid; 4,8-dimethylnonanoic acid; and 2,6-dimethylheptanoic acid, which give rise to a possible mono- and di-terminal oxidation. In case of sec -octylbenzene, eight metabolites were detected including 5-phenylhexanoic acid; 3-phenylbutyric acid; 2-phenylpropionic acid; beta -methylcinnamic acid; acetophenone; beta -hydroxy acetophenone; 2,3-dihydroxy benzoic acid and succinic acid. From these intermediates a new degradation pathway for sec -octylbenzene was investigated. Our results indicate that N. cyriacigeorgica has the ability to degrade aliphatic and branched chain alkanes as well as alkylbenzene effectively and, therefore, N. cyriacigeorgica is probably a suitable bacterium for biodegradation of oil or petroleum products in contaminated soils. ((c) 2010 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim).

Process-based management approaches for salt desert shrublands dominated by downy brome

USDA-ARS?s Scientific Manuscript database

Downy brome grass (Bromus tectorum L.) invasion has severely altered key ecological processes such as disturbance regimes, soil nutrient cycling, community assembly, and successional pathways in semi-arid Great Basin salt desert shrublands. Restoring the structure and function of these severly alte...

Microbial Response to UV Exposure and Nitrogen Limitation in Desert Soil Crusts

NASA Astrophysics Data System (ADS)

Fulton, J. M.; Van Mooy, B. A.

2016-12-01

Microbiotic soil crusts have diverse biomarker distributions and C and N stable isotopic compositions that covary with soil type. Sparse plant cover and the relative lack of soil disturbance in arid/semi-arid landscapes allows populations of soil cyanobacteria to develop along with fungi and heterotrophic bacteria. Microbial communities in this extreme environment depend in part on the production of scytonemin, a UV protective pigment, by cyanobacteria near the top of the crust. N limitation of microbial growth also affects soil crust population dynamics, increasing the requirement of N2fixation by diazotrophic cyanobacteria. We collected 56 soil crust samples from 27 locations throughout the Great Salt Lake Desert, including four transects spanning high-elevation, erosion-dominated soils to lower elevation soils dominated by silt-accumulation. Erosion-dominated soil surfaces included rounded gravel and cobbles; in the interstices there were poorly-developed microbiotic crusts on sandy loam with low δ15N values near 0‰ that point toward microbial growth dependent on cyanobacterial N2 fixation. Nutrients regenerated by heterotrophic bacteria may have been eroded from the system, providing a positive feedback for N2 fixation. High scytonemin:chlorophyll a ratios suggest that cyanobacteria required enhanced protection from UV damage in these crusts. A similar increase in scytonemin:chlorophyll a ratio during soil crust rehydration experiments also points toward the importance of UV protection. Glycolipid:phospholipid ratios were lowest where N2 fixation was favored, however, suggesting that the cyanobacterial population was relatively small, possibly because of the metabolic cost of N2fixation. Microbiotic crusts on silt loam soils, on the other hand, had higher δ15N values between 3.5 and 7.8‰, consistent with heterotrophic growth and nutrient recycling. Lower scytonemin:chlorophyll a ratios suggest that relatively high photosynthetic activity was supported in these well-developed crusts. Vertical migration may have reduced the scytonemin requirement of cyanobacteria. Higher glycolipid:phospholipid ratios suggest that cyanobacteria and algae had greater relative abundance than heterotrophic bacteria in well-developed compared with erosion-dominated crusts.

Development of Chemical and Mechanical Cleaning Procedures for Genesis Solar Wind Samples

NASA Technical Reports Server (NTRS)

Schmeling, M.; Jurewicz, A. J. G.; Gonzalez, C.; Allums, K. K.; Allton, J. H.

2018-01-01

The Genesis mission was the only mission returning pristine solar material to Earth since the Apollo program. Unfortunately, the return of the spacecraft on September 8, 2004 resulted in a crash landing shattering the solar wind collectors into smaller fragments and exposing them to desert soil and other debris. Thorough surface cleaning is required for almost all fragments to allow for subsequent analysis of solar wind material embedded within. However, each collector fragment calls for an individual cleaning approach, as contamination not only varies by collector material but also by sample itself.

Soil organic carbon response to shrub encroachment regulated by soil aggregates

NASA Astrophysics Data System (ADS)

Zhu, Y.; Li, H.; Shen, H.; Feng, Y.; Fang, J.

2017-12-01

Shrub encroachment leads to change in soil organic carbon content, but there still exists a lot of uncertainty in its mechanism as it relates to deep soil research. Soil organic carbon is usually associated with stable aggregate quantity. In this study, we conducted a field investigation for typical steppe and desert steppe in Inner Mongolia with the view to examining the impact of shrub encroachment on soil organic carbon with soil aggregate at a depth of 0-500 cm. The results show that in the desert steppe, the particle size of soil aggregate content level in different depth are presented the trend of shrub patches is lower than the herb matrix, organic carbon content of soil aggregate under 50 cm deeper presents the trend of shrub patches is higher than herb matrix, eventually leading to shrub patches whole soil organic carbon in the 0 to 50 cm depth lower than the herb matrix, and in deeper soil below 50 cm higher than the herb matrix. In the typical steppe, there is no significant difference between soil aggregate structure of shrub patches and herb matrix, but organic carbon content of soil aggregate, especially large aggregate organic carbon content in the shrub patches is significantly higher than the herb matrix, so that the whole soil organic carbon content in the shrub patches is significantly higher than herb matrix. The rate of soil organic carbon content change (0-100 cm) by shrub encroachment showed significant negative correlation with the mean weight diameter of soil aggregate of herb matrix. We also found that the variations of soil organic carbon in desert steppe is not dominant by aggregates of some size, but the change of the typical steppe soil organic carbon mainly contributed by > 0.25 mm and 0.053-0.25 mm aggregates. The results suggested that the effects of shrub encroachment on soil organic carbon is regulated by soil aggregate, but it is varied for different type of grassland, which should provide some insights into our understanding on regional carbon budget under global environment change.

Thermal volatilization (TV) of different hyperarid Mars like-soils from the Atacama Desert: Implications for the analysis of the Phoenix Mission

NASA Astrophysics Data System (ADS)

Valdivia-Silva, J. E.; Navarro-Gonzalez, R.; McKay, C. P.

2008-09-01

The Phoenix spacecraft will search for organics in the soil and ice in the Martian north polar regions using thermal volatilization (TV) followed by mass spectrometry (MS). This experiment is a combination of a high-temperature furnace and a mass spectrometer that will be use to analyze samples delivered to instrument via a robotic arm. The samples will be heated from ambient to 1000ºC while evolved gases, including organic molecules and fragments, if they are present, will be simultaneously measured by a magnetic sector mass spectrometer (1). Our laboratory has developed a sample characterization method using a pyrolizer integrated to a quadrupole mass spectrometer to support the interpretations of TV data. The Atacama Desert, on northern Chile and southern Peru, has been considered the most arid region over the world (2) and an excellent Mars-like soil analogous (3). These soils contain very low levels to organic matter (10-40 ppm of organic C), and exotic mineralogical composition including iron oxides, which are common characteristics expected on Mars. A previous paper that examined the release of organics from samples soils by flash TV (pyrolisis) coupled to GC-MS (4). This work showed low efficiency of flash TV in soils with low organics or high contents of iron minerals. In addition, other study of agricultural soils showed low correlation between organics concentration and TV response, when levels of total organic matter were below 50000 ppm C or high presence of iron oxides (5). However, the efficiency of gradual heating by TV analysis from hyperarid soils has not been investigated. Here we examine the thermal and evolved gas properties of six types of soils from the two hyperarid core regions from the Atacama Desert: Yungay (northern Chile) and Pampas de La Joya (southern Peru), in order to investigate the effect of soil matrix and low organics contents over TV response. Between 20 to 40 mg of soil was loaded in a capillary quartz tube and it was mounted in the center of platinum coil filament pyrolizer probe. Then sample into de quartz tube was subjected to a thermal treatment from 30°C to 1200°C with a heating rate of 20°C/min. The resulting volatiles evolved from the sample were carried away by helium and transferred into a HP quadrupole mass spectrometer operating in electron ionization mode at 70 eV with a resolution of 1m/z. The mass analyzer was scanned from 10 to 200 m/z at a rate 5.3 scans per second. The nominal sensitivity of the mass analyzer is 0.02 ppb of hexachlorobenzene. Blanks were prepared with no soil added. As expected, there were significant differences in the evolved gas behaviors between soils samples depending of the soil matrix under similar heating conditions. First, the samples belonging to the most arid environments (PE001, PE389) had significant differences compared with less arid soils (PE378, PE386). Carbon in hyperarid soils, in the form of CO2 (ion 44 m/z) began its release to 330±30°C, while the less arid soils to 245±45°C. Volatile ions released from soils during TV-MS analysis were analyzed searching organics fragments. Soil type VI (PE-001), which contains ~11.4 ppm organic C, showed the release of the following mass fragments: 18, 44, 48, 64, and 66. Sources for the release of CO2 in TV analysis of soils comes to oxidation of organic matter (<600ºC), and thermal decomposition of carbonates (>600ºC). Mass 18 originates from water releasing in the course of dehydration processes that is bound in soil minerals, and from oxidation of organics in different temperatures depending the mineral fraction in the soil. The masses 48, 64, and 66 have similar thermal properties, beginning to be released at ~370°C and continue to rise up to 1200°C. These masses are due to the decomposition of sulfates into SO+, SO2 +, and S34O2 +. Mass 66 is detected only if the abundance of mass 64 is very high. TV traces from soils type V (PE-276), type I (PE-361), and type II (PE-388), which contain low organics concentrations (3-23 ppm of organic C), presented similar ions released to soil type VI, but with some variations at times of peak start or maximum release. The TV-MS trace for soil type IV (PE-287) showed the release of the following ions: 16, 18, 36, 44, 48, and 64. In this soil, the mass 44 showed the highest value at >760°C, probably by thermal decomposition of carbonates at higher temperatures; however at 700ºC, CO2 could result from the decomposition oxidation of refractory organics that have been detected by pyrolisis-GC-MS at 750ºC (4). In contrast, the TV-MS trace for sample soil type III (PE-386), which contains 35 ppm of organic C, showed the release of the following major mass fragments (m/z): 18, 30, 36, 44, 48 and 64 (Figure 1). EPSC Abstracts, Vol. 3, EPSC2008-A-00490, 2008 European Planetary Science Congress, Author(s) 2008 Probably, the mass 30 is due to NO that evolves from the thermal oxidation of N-organics at low temperature or degradation of nitrates at high temperatures. Additionally, ion 36 could be due to thermal degradation to chlorides. Our results show interesting ions released from Marslike soils by TV analysis, however soils that have low levels to organic carbon (3-40 ppm), were not detected by this method. If the concentrations of organics in the soils and ice on Mars at the Phoenix landing site are low than 30 ppm, the experiment could fail. Recently, our laboratory investigated the presence of organics in the samples soils by the release of NO (mass 30) at low temperatures using TV-MS (Research submitted). Hence, Phoenix mission could have an option in the searching for organic matter on Mars. These data indicate the importance of the study of Mars-like soils to prevent similar problems in space research.

Impact of pilling and long-term topsoil storage on the potential soil microbial activity in the Northern Chihuahuan Desert

USDA-ARS?s Scientific Manuscript database

Cryptobiotic soil crusts in arid regions contribute to ecosystem stability through increased water infiltration, soil aggregate stability, and nutrient cycling between the soil community and vascular plants. Natural gas mining involves removal of the topsoil, including surface crust, and storage of ...

Arbuscular mycorrhizal fungi associated with vegetation and soil parameters under rest grazing management in a desert steppe ecosystem.

PubMed

Bai, Gegenbaoleer; Bao, Yuying; Du, Guoxin; Qi, Yunlong

2013-05-01

The impact of rest grazing on arbuscular mycorrhizal fungi (AMF) and the interactions of AMF with vegetation and soil parameters under rest grazing condition were investigated between spring and late summer in a desert steppe ecosystem with different grazing managements (rest grazing with different lengths of resting period, banned or continuous grazing) in Inner Mongolia, China. AMF diversity and colonization, vegetation biomass, soil properties and soil phosphatase activity were examined. In rest grazing areas of 60 days, AMF spore number and diversity index at a 0-10 cm soil depth as well as vesicular and hyphal colonization rates were higher compared with other grazing treatments. In addition, soil organic matter and total N contents were highest and soil alkaline phosphatase was most active under 60-day rest grazing. In August and September, these areas also had the highest amount of aboveground vegetation. The results indicated that resting grazing for an appropriate period of time in spring has a positive effect on AMF sporulation, colonization and diversity, and that under rest grazing conditions, AMF parameters are positively correlated with some soil characteristics.

Seed removal in a tropical North American desert: an evaluation of pre- and post-dispersal seed removal in Stenocereus stellatus.

PubMed

Álvarez-Espino, R; Ríos-Casanova, L; Godínez-Álvarez, H

2017-05-01

To determine seed removal influence on seed populations, we need to quantify pre- and post-dispersal seed removal. Several studies have quantified seed removal in temperate American deserts, but few studies have been performed in tropical deserts. These studies have only quantified pre- or post-dispersal seed removal, thus underestimating the influence of seed removal. We evaluated pre- and post-dispersal seed removal in the columnar cactus Stenocereus stellatus in a Mexican tropical desert. We performed selective exclosure experiments to estimate percentage of seeds removed by ants, birds and rodents during the pre- and post-dispersal phases. We also conducted field samplings to estimate abundance of the most common seed removers. Birds (10-28%) removed a higher percentage of seeds than ants (2%) and rodents (1-4%) during pre-dispersal seed removal. Melanerpes hypopolius was probably the main bird removing seeds from fruits. Ants (62-64%) removed a higher percentage of seeds than birds (34-38%) and rodents (16-30%) during post-dispersal seed removal. Pogonomyrmex barbatus was probably the main ant removing seeds from soil. Birds and ants are the main pre- and post-dispersal seed removers in S. stellatus, respectively. Further studies in other S. stellatus populations and plants with different life forms and fruit types will contribute to evaluate seed removal in tropical American deserts. © 2016 German Botanical Society and The Royal Botanical Society of the Netherlands.

Theater of Operations Construction in the Desert: A Handbook of Lessons Learned in the Middle East

DTIC Science & Technology

1981-01-01

dehydrates the desert environment. In addition, the wind always carries fine soil particles which abrade building elements, clog mechar:ical devices, and...lower salt rejection, and increased likelihood of scaling and membrane hydrolysis . Manufacturers recommend that feed stream flows not be lower than...undergo accelerated decomposition /aging when stored in high desert heat. This is complicated by the fa~t that many of the tests were designed to be

MICROTOPOGRAPHY AND GRAZING IN DESERT RANGE LAND: A LESSON IN STATISTICS VERSUS REALITY IN THE FIELD

EPA Science Inventory

This presentation summarizes two experiments on the effects of grazing on soil microtopography in a Chihuahuan Desert rangeland. In the first experiment, we measured the effect of three consecutive years of short duration <48 hours per year) intense grazing (20--40 yearling cows ...

Critical soil water period for primary production in Chihuahuan Desert ecosystems

USDA-ARS?s Scientific Manuscript database

In desert ecosystems where water is the main limiting factor, it is expected that net primary production (NPP) is largely determined by precipitation. However, precipitation alone often explains only a small portion of the variation in NPP, and the critical precipitation period for NPP varies by pla...

WIND CHARACTERISTICS OF MESQUITE STREETS IN THE NORTHERN CHIHUAHUAN DESERT, NEW MEXICO, USA

EPA Science Inventory

The most active areas for sand movement in the mesquite-dominated ecosystems in the northern part of the Chihuahuan Desert are elongated bare soil patches referred to as "streets." Wind properties were measured at two flat mesquite sites having highly similar sandy textures but...

EFFECTS OF INTENSE, SHORT-DURATION GRAZING ON MICROTOPOGRAPHY IN A CHIHUAHUAN DESERT GRASSLAND

EPA Science Inventory

We measured the effects of short-term intense grazing by domestic cattle on the microtopography of a black-grama grass (Bouteloua eriopoda) dominated desert grassland. Plots were grazed during winter or summer for 24-36 hours by 20-40 yearlings in 1995 and 1996. Soil microtopogra...

Large-Scale Land Development, Fugitive Dust, and Increased Coccidioidomycosis Incidence in the Antelope Valley of California, 1999-2014.

PubMed

Colson, Aaron J; Vredenburgh, Larry; Guevara, Ramon E; Rangel, Natalia P; Kloock, Carl T; Lauer, Antje

2017-06-01

Ongoing large-scale land development for renewable energy projects in the Antelope Valley, located in the Western Mojave Desert, has been blamed for increased fugitive dust emissions and coccidioidomycosis incidence among the general public in recent years. Soil samples were collected at six sites that were destined for solar farm construction and were analyzed for the presence of the soil-borne fungal pathogen Coccidioides immitis which is endemic to many areas of central and southern California. We used a modified culture-independent nested PCR approach to identify the pathogen in all soil samples and also compared the sampling sites in regard to soil physical and chemical parameters, degree of disturbance, and vegetation. Our results indicated the presence of C. immitis at four of the six sites, predominantly in non-disturbed soils of the Pond-Oban complex, which are characterized by an elevated pH and salt bush communities, but also in grassland characterized by different soil parameters and covered with native and non-native annuals. Overall, we were able to detect the pathogen in 40% of the soil samples (n = 42). Incidence of coccidioidomycosis in the Antelope Valley was positively correlated with land use and particulate matter in the air (PM10) (Pearson correlation coefficient >0.5). With the predicted population growth and ongoing large-scale disturbance of soil in the Antelope Valley in coming years, incidence of coccidioidomycosis will likely further increase if policy makers and land developers continue to ignore the risk of grading land without implementing long-term dust mitigation plans in Environmental Impact Reports.

SOIL MICROARTHROPODS AS INDICATORS OF EXPOSURE TO ENVIRONMENTAL STRESS IN CHIHUAHUAN DESERT RANGELANDS

EPA Science Inventory

We studied soil microarthropod communities along livestock grazing disturbance gradients, inside and outside grazing exclosures, and on areas subjected to restoration efforts (herbicide and bulldozing) in order to test the suitability of mites as indicators of rangeland soil qual...

SOIL MICROARTHROPODS AS INDICATORS OF EXPOSURE TO ENVIRONMENTAL STRESS IN CHIHUAHUAN DESERT RANGELANDS.

EPA Science Inventory

We studied soil microarthropod communities along livestock grazing disturbance gradients, inside and outside grazing exclosures, and on areas subjected to restoration efforts(herbicide and bulldozing)in order to test the suitability of mites as indicators of rangeland soil qualit...

Data from a thick unsaturated zone underlying Oro Grande and Sheep Creek washes in the western part of the Mojave Desert, near Victorville, San Bernardino County, California

USGS Publications Warehouse

Izbicki, John A.; Clark, Dennis A.; Pimental, Maria I.; Land, Michael; Radyk, John C.; Michel, Robert L.

2000-01-01

This report presents data on the physical properties of unsaturated alluvial deposits and on the chemical and isotopic composition of soil water and soil gas collected at 12 monitoring sites in the western part of the Mojave Desert, near Victorville, California. Sites were installed using the ODEX air-hammer method. Seven sites were located in the active channels of Oro Grande and Sheep Creek Washes. The remaining five sites were located away from the active washes. Most sites were drilled to a depth of about 100 feet below land surface; two sites were drilled to the water table almost 650 feet below land surface. Drilling procedures, lithologic and geophysical data, and site construction and instrumentation are described. Core material was analyzed for water content, bulk density, water potential, particle size, and water retention. The chemical composition of leachate from almost 1,000 subsamples of cores and cuttings was determined. Water extracted from selected subsamples of cores was analyzed for tritium and the stable isotopes of oxygen and hydrogen. Water from suction-cup lysimeters and soil-gas samples also were analyzed for chemical and isotopic composition. In addition, data on the chemical and isotopic composition of bulk precipitation from five sites and on ground water from two water-table wells are reported.

A comparison of soil climate and biological activity along an elevation gradient in the eastern Mojave Desert

USGS Publications Warehouse

Amundson, R.G.; Chadwick, O.A.; Sowers, J.M.

1989-01-01

Soil temperature, moisture, and CO2 were monitored at four sites along an elevation transect in the eastern Mojave Desert from January to October, 1987. Climate appeared to be the major factor controlling CO2 partial pressures, primarily through its influence of rates of biological reactions, vegetation densities, and organic matter production. With increasing elevation, and increasing actual evapotranspiration, the organic C, plant density, and the CO2 content of the soils increased. Between January and May, soil CO2 concentrations at a given site were closely related to variations in soil temperature. In July and October, temperatures had little effect on CO2, presumably due to low soil moisture levels. Up to 75% of litter placed in the field in March was lost by October whereas, for the 3 lower elevations, less than 10% of the litter placed in the field in April was lost through decomposition processes. ?? 1989 Springer-Verlag.

Hydrologic influences on soil properties along ephemeral rivers in the Namib Desert

USGS Publications Warehouse

Jacobson, P.J.; Jacobson, K.M.; Angermeier, P.L.; Cherry, D.S.

2000-01-01

Soils were examined along three ephemeral rivers in the Namib Desert to assess the influence of their hydrologic characteristics on soil properties. Soils consisted of layers of fluvially deposited, organic-rich silts, interstratified with fluvial and aeolian sands. The most significant influence of the ephemeral hydrologic regime upon soils was related to the downstream alluviation associated with hydrologic decay. This alluviation increased the silt proportion of soils in the lower reaches of the rivers. Organic carbon, nitrogen and phosphorous were correlated with silt content, and silt deposition patterns influenced patterns of moisture availability and plant rooting, creating and maintaining micro-habitats for various organisms. Localized salinization occurred in association with wetland sites and soluble salt content tended to increase downstream. Because of the covariance between silt and macronutrients, and the influence of silt upon moisture availability and habitat suitability, alluviation patterns associated with the hydrologic regime strongly influence the structure, productivity, and spatial distribution of biotic communities in ephemeral river ecosystems. (C) 2000 Academic Press.

Density and diversity of protozoa in some arid Australian soils.

PubMed

Robinson, Bret S; Bamforth, Stuart S; Dobson, Philip J

2002-01-01

This is the first extensive study of soil protozoa of arid lands. Twenty-six samples from litters, soils, termitaria, and a cyanobacterial crust, collected from central and south Australian arid lands, were analyzed for numbers and species of gymnamoebae, ciliates, and testacea. Amoebae ranged from 1,000-5,000/g of material, and were two orders of magnitude more abundant than ciliates. Both groups increased in abundance and species richness from bare soils through spinifex to mulga to chenopod vegetations. Testacea ranged 900-5,000/g with similar species richness throughout vegetations, but reached 11,900/g with a doubling of species in a refugium in Kings Canyon. The most prevalent species of amoebae, ciliates, and testacea were taxa associated with ephemeral and disturbed habitats (r-selection). The cyanobacterial crust might be considered a micro-refugium because it contained a number of non-encysting protozoa, including Thecamoeba sp. and Nassula picta, feeding on cyanobacterial filaments. The numbers and species richness of protozoa under shrubs were greater than in bare soils, supporting the resource island hypothesis that desert plants create soil heterogeneity by localizing soil fertility under their canopies.

Ecological and physiological studies on soil fungi at Western region, libya.

PubMed

El-Said, A H M; Saleem, A

2008-03-01

Sixty three species and 5 varieties belonging to 30 fungal genera were collected from 75 soil samples. Cultivated (29 genera and 58 species + 5 var.), desert (22 and 35 + 2 var.) and saline soil (21 and 41 + 1 var.) fungi were recovered on glucose-, cellulose- and 50% sucrose-Czapek's agar at 28℃. The most common genera were Alternaria, Aspergillus, Emericella, Fusarium, Mycosphaerella, Nectria and Penicillium. The most prevalent species from the three types of soils on the three types of media were Alternaria alternata, Aspergillus flavus, A. fumigatus, A. niger, A. terreus, Emericella nidulans, Fusarium oxysporum, Mycosphaerella tassiana, Nectria haematococca and Penicillium chrysogenum. Chaetomium globosum was in the top of fungi in producing endo-β-1,4-glucanases among the 42 tested isolates obtained from soils on cellulose-Czapek's agar. Maximum production of this enzyme by C. globosum obtained after 6 days of incubation at 30℃ with culture medium containing maltose as a carbon source and ammonium nitrate as a nitrogen source and pH initially adjusted to 6.

Dormancy cycling and persistence of seeds in soil of a cold desert halophyte shrub

PubMed Central

Cao, Dechang; Baskin, Carol C.; Baskin, Jerry M.; Yang, Fan; Huang, Zhenying

2014-01-01

Background and Aims Formation of seed banks and dormancy cycling are well known in annual species, but not in woody species. In this study it was hypothesized that the long-lived halophytic cold desert shrub Kalidium gracile has a seed bank and dormancy cycling, which help restrict germination to a favourable time for seedling survival. Methods Fresh seeds were buried in November 2009 and exhumed and tested for germination monthly from May 2010 to December 2011 over a range of temperatures and salinities. Germination recovery and viability were determined after exposure to salinity and water stress. Seedling emergence and dynamics of the soil seed bank were investigated in the field. Key Results Seeds of K. gracile had a soil seed bank of 7030 seeds m−2 at the beginning of the growing season. About 72 % of the seeds were depleted from the soil seed bank during a growing season, and only 1·4 % of them gave rise to seedlings that germinated early enough to reach a stage of growth at which they could survive to overwinter. About 28 % of the seeds became part of a persistent soil seed bank. Buried seeds exhibited an annual non-dormancy/conditional dormancy (ND/CD) cycle, and germination varied in sensitivity to salinity during the cycle. Dormancy cycling is coordinated with seasonal environmental conditions in such a way that the seeds germinate in summer, when there is sufficient precipitation for seedling establishment. Conclusions Kalidium gracile has three life history traits that help ensure persistence at a site: a polycarpic perennial life cycle, a persistent seed bank and dormancy cycling. The annual ND/CD cycle in seeds of K. gracile contributes to seedling establishment of this species in the unpredictable desert environment and to maintenance of a persistent soil seed bank. This is the first report of a seed dormancy cycle in a cold desert shrub. PMID:24249808

The stage of soil development modulates rhizosphere effect along a High Arctic desert chronosequence.

PubMed

Mapelli, Francesca; Marasco, Ramona; Fusi, Marco; Scaglia, Barbara; Tsiamis, George; Rolli, Eleonora; Fodelianakis, Stilianos; Bourtzis, Kostas; Ventura, Stefano; Tambone, Fulvia; Adani, Fabrizio; Borin, Sara; Daffonchio, Daniele

2018-05-01

In mature soils, plant species and soil type determine the selection of root microbiota. Which of these two factors drives rhizosphere selection in barren substrates of developing desert soils has, however, not yet been established. Chronosequences of glacier forelands provide ideal natural environments to identify primary rhizosphere selection factors along the changing edaphic conditions of a developing soil. Here, we analyze changes in bacterial diversity in bulk soils and rhizospheres of a pioneer plant across a High Arctic glacier chronosequence. We show that the developmental stage of soil strongly modulates rhizosphere community assembly, even though plant-induced selection buffers the effect of changing edaphic factors. Bulk and rhizosphere soils host distinct bacterial communities that differentially vary along the chronosequence. Cation exchange capacity, exchangeable potassium, and metabolite concentration in the soil account for the rhizosphere bacterial diversity. Although the soil fraction (bulk soil and rhizosphere) explains up to 17.2% of the variation in bacterial microbiota, the soil developmental stage explains up to 47.7% of this variation. In addition, the operational taxonomic unit (OTU) co-occurrence network of the rhizosphere, whose complexity increases along the chronosequence, is loosely structured in barren compared with mature soils, corroborating our hypothesis that soil development tunes the rhizosphere effect.

Selected micrometeorological and soil-moisture data at Amargosa Desert Research Site, an arid site near Beatty, Nye County, Nevada, 1998-2000

USGS Publications Warehouse

Johnson, Michael J.; Mayers, Charles J.; Andraski, Brian J.

2002-01-01

Selected micrometeorological and soil-moisture data were collected at the Amargosa Desert Research Site adjacent to a low-level radioactive waste and hazardous chemical waste facility near Beatty, Nev., 1998-2000. Data were collected in support of ongoing research studies to improve the understanding of hydrologic and contaminant-transport processes in arid environments. Micrometeorological data include precipitation, air temperature, solar radiation, net radiation, relative humidity, ambient vapor pressure, wind speed and direction, barometric pressure, soil temperature, and soil-heat flux. All micrometeorological data were collected using a 10-second sampling interval by data loggers that output daily mean, maximum, and minimum values, and hourly mean values. For precipitation, data output consisted of daily, hourly, and 5-minute totals. Soil-moisture data included periodic measurements of soil-water content at nine neutron-probe access tubes with measurable depths ranging from 5.25 to 29.75 meters. The computer data files included in this report contain the complete micrometeorological and soil-moisture data sets. The computer data consists of seven files with about 14 megabytes of information. The seven files are in tabular format: (1) one file lists daily mean, maximum, and minimum micrometeorological data and daily total precipitation; (2) three files list hourly mean micrometeorological data and hourly precipitation for each year (1998-2000); (3) one file lists 5-minute precipitation data; (4) one file lists mean soil-water content by date and depth at four experimental sites; and (5) one file lists soil-water content by date and depth for each neutron-probe access tube. This report highlights selected data contained in the computer data files using figures, tables, and brief discussions. Instrumentation used for data collection also is described. Water-content profiles are shown to demonstrate variability of water content with depth. Time-series data are plotted to illustrate temporal variations in micrometeorological and soil-water content data. Substantial precipitation at the end of an El Ni?o cycle in early 1998 resulted in measurable water penetration to a depth of 1.25 meters at one of the four experimental soil-monitoring sites.

Selected micrometeorological, soil-moisture, and evapotranspiration data at Amargosa Desert Research Site in Nye County near Beatty, Nevada, 2001-05

USGS Publications Warehouse

Johnson, Michael J.; Mayers, C. Justin; Garcia, C. Amanda; Andraski, Brian J.

2007-01-01

Selected micrometeorological and soil-moisture data were collected at the Amargosa Desert Research Site adjacent to a low-level radio-active waste and hazardous chemical waste facility near Beatty, Nevada, 2001-05. Evapotranspiration data were collected from February 2002 through the end of December 2005. Data were col-lected in support of ongoing research to improve the understanding of hydrologic and contaminant-transport processes in arid environments. Micrometeorological data include solar radiation, net radiation, air temperature, relative humidity, saturated and ambient vapor pressure, wind speed and direction, barometric pressure, precipitation, near-surface soil temperature, soil-heat flux and soil-water content. All micrometeorological data were collected using a 10-second sampling interval by data loggers that output daily and hourly mean values. Daily maximum and minimum values are based on hourly mean values. Precipitation data output includes daily and hourly totals. Selected soil-moisture profiles at depth include periodic measurements of soil volumetric water-content measurements at nine neutron-probe access tubes to depths ranging from 5.25 to 29.25 meters. Evapotranspiration data include measurement of daily evapotranspiration and 15-minute fluxes of the four principal energy budget components of latent-heat flux, sensible-heat flux, soil-heat flux, and net radiation. Other data collected and used in equations to determine evapotranspiration include temperature and water content of soil, temperature and vapor pressure of air, and covariance values. Evapotranspiration and flux estimates during 15-minute intervals were calculated at a 0.1-second execution interval using the eddy covariance method. Data files included in this report contain the complete micrometeorological, soil-moisture, and evapotranspiration field data sets. These data files are presented in tabular Excel spreadsheet format. This report highlights selected data contained in the computer generated data files using figures, tables, and brief discussions. Instrumentation used for data collection also is described. Water-content profiles are shown to demonstrate variability of water content with depth. Time-series data are plotted to illustrate temporal variations in micrometeorological, soil-water content, and evapotranspiration data.

Soil nitrogen patterns induced by colonization of Polygonum cuspidatum on Mt. Fuji.

PubMed

Hirose, T; Tateno, M

1984-02-01

The spatial pattern of soil nitrogen was analyzed for a patchy vegetation formed by the colonization of Polygonum cuspidatum in a volcanic "desert" on Mt. Fuji. Soils were sampled radially from the bare ground to the center of the patch, and analyses were done for bulk density, water content, soil acidity, organic matter, organic nitrogen, and ammonium and nitrate nitrogen. The soils matured with succession from the bare ground through P. cuspidatum to Miscanthus oligostachyus and Aster ageratoides sites: bulk density decreased, and water content, organic matter, organic nitrogen, and ammonium nitrogen increased. Nitrate nitrogen showed the highest values at the P. cuspidatum site. Application of principal component analysis to the soil data discriminated two component factors which control the variation of soil characteristics: the first factor is related to soil formation and the second factor to nitrogen mineralization and nitrification. The effect of soil formation on nitrogen mineralization and nitrification was analyzed with a first-order kinetic model. The decreasing trends with soil formation in the ratios of mineral to organic nitrogen and of nitrate to ammonium nitrogen could be accounted for by the higher activity of immobilization by microorganisms and uptake by plants in the more mature ecosystem.

Stimulation of Mojave Desert net ecosystem CO2 uptake after winter precipitation with the opposite effect after summer rains based on 7 years of flux data

NASA Astrophysics Data System (ADS)

Jasoni, Richard; Arnone, John; Fenstermaker, Lynn; Wohlfahrt, Georg

2014-05-01

Eddy covariance measurements of net ecosystem CO2 exchange (NEE) in the Mojave Desert (Jasoni et al. 2005-Global Change Biology 11:749-756; Wohlfahrt et al. 2008-Global Change Biology 14:1475-1487), and in other deserts of the world (e.g., Hastings et al. 2005- Global Change Biology 14:927-939, indicate greater rates of net CO2 uptake (more negative NEE values) and net ecosystem productivity (NEP) than would have been expected for deserts (as high as -120 g C m-2 year-1). We continue to observe high rates of NEE and NEP and seek explanations for these findings at interannual, seasonal, and sub-seasonal time scales. Because moisture availability most strongly constrains biological activity in deserts, responses to rains probably play a significant role in defining components of NEE-namely net primary productivity (NPP, or roughly net photosynthesis by vascular and non-vascular plants) and heterotrophic respiration (Rh, mainly by soil microorganisms). Most precipitation in the Mojave Desert falls from October through April and periodically in the summer as convective storms. The main objective of this study was to quantify the extent to which NEE and the net flux of CO2 from/to biological soil crust (BSC) covered soil surfaces respond to rain pulses occurring during cool/cold and warm/hot times of the year. Flux data from 7 years (2005-2011) of measurements at our shub land desert site (average 150 mm rain per year) located 120 km northwest of Las Vegas showed a range in NEP from -111±34 to -47±28 g C m-2 year-1. Cool season rains usually stimulated NEE (more negative NEE values or net CO2 uptake) while warm season rains reversed this effect and led to positive NEE values (net ecosystem CO2 efflux. Cool season stimulation of NEE often occurred in the absence of green leaves on vascular plants, suggesting that photosynthesis of BSCs (up to 70% of soil surface covered by cyanobacteria, mosses, and lichens) were responsible for this net uptake. At other times during the cool season, herbaceous vascular plants also contributed to increases in NEE. Parallel experiments in which we simulated rain pulses (10 mm) in the cool (February) and warm (May) seasons and measured net CO2 fluxes from BSC covered soil surfaces showed responses similar to those observed at the level of the ecosystem. Earlier continuous measurements of soil air relative humidity (RH; 2001-2006) showed that soil moisture increases occurring after rains in the cool season persist up to 3 weeks after events (a total of 48-108 day equivalent per year at >98% RH) indicating conditions favorable for photosynthetic activity. Thus, net CO2 uptake by BSCs during cool months may largely determine large NEEs measured under moist conditions during this time of year and, together with NPP of herbaceous vascular plants, help explain overall consistently high annual NEP in these ecosystems.

A wide variety of putative extremophiles and large beta-diversity at the Mars Desert Research Station (Utah)

NASA Astrophysics Data System (ADS)

Direito, Susana O. L.; Ehrenfreund, Pascale; Marees, Andries; Staats, Martijn; Foing, Bernard; Röling, Wilfred F. M.

2011-07-01

Humankind's innate curiosity makes us wonder whether life is or was present on other planetary bodies such as Mars. The EuroGeoMars 2009 campaign was organized at the Mars Desert Research Station (MDRS) to perform multidisciplinary astrobiology research. MDRS in southeast Utah is situated in a cold arid desert with mineralogy and erosion processes comparable to those on Mars. Insight into the microbial community composition of this terrestrial Mars analogue provides essential information for the search for life on Mars: including sampling and life detection methodology optimization and what kind of organisms to expect. Soil samples were collected from different locations. Culture-independent molecular analyses directed at ribosomal RNA genes revealed the presence of all three domains of life (Archaea, Bacteria and Eukarya), but these were not detected in all samples. Spiking experiments revealed that this appears to relate to low DNA recovery, due to adsorption or degradation. Bacteria were most frequently detected and showed high alpha- and beta-diversity. Members of the Actinobacteria, Proteobacteria, Bacteroidetes and Gemmatimonadetes phyla were found in the majority of samples. Archaea alpha- and beta-diversity was very low. For Eukarya, a diverse range of organisms was identified, such as fungi, green algae and several phyla of Protozoa. Phylogenetic analysis revealed an extraordinary variety of putative extremophiles, mainly Bacteria but also Archaea and Eukarya. These comprised radioresistant, endolithic, chasmolithic, xerophilic, hypolithic, thermophilic, thermoacidophilic, psychrophilic, halophilic, haloalkaliphilic and alkaliphilic micro-organisms. Overall, our data revealed large difference in occurrence and diversity over short distances, indicating the need for high-sampling frequency at similar sites. DNA extraction methods need to be optimized to improve extraction efficiencies.

What makes the desert bloom? Contribution of dust and crusts to soil fertility on the Colorado Plateau

Treesearch

Jayne Belnap; Richard Reynolds; Marith Reheis; Susan L. Phillips

2001-01-01

Eolian dust (windblown silt and clay) and biological soil crusts are both important to ecosystem functioning of arid lands. Dust furnishes essential nutrients, influences hydrology, contributes to soil formation, and renders surfaces vulnerable to erosion. Biological soil crusts contribute directly to soil fertility by fixing carbon and nitrogen, and indirectly by...

Dust in the wind: long range transport of dust in the atmosphere and its implications for global public and ecosystem health

USGS Publications Warehouse

Griffin, Dale W.; Kellogg, Christina A.; Shinn, Eugene A.

2001-01-01

Movement of soil particles in atmospheres is a normal planetary process. Images of Martian dust devils (wind-spouts) and dust storms captured by NASA's Pathfinder have demonstrated the significant role that storm activity plays in creating the red atmospheric haze of Mars. On Earth, desert soils moving in the atmosphere are responsible for the orange hues in brilliant sunrises and sunsets. In severe dust storm events, millions of tons of soil may be moved across great expanses of land and ocean. An emerging scientific interest in the process of soil transport in the Earth's atmosphere is in the field of public and ecosystem health. This article will address the benefits and the potential hazards associated with exposure to particle fallout as clouds of desert dust traverse the globe.

Shift in soil microbial communities with shrub encroachment in Inner Mongolia grasslands, China

NASA Astrophysics Data System (ADS)

Shen, H.; Li, H.; Zhang, J.; Hu, H.; Chen, L.; Zhu, Y.; Fang, J.

2017-12-01

The ongoing expansion of shrub encroachment into grasslands represents a unique form of land cover change. How this process affects soil microbial communities is poorly understood. In this study, we aim to assess the effects of shrub encroachment on soil microbial biomass, abundance and composition by comparing data between shrub patches and neighboring herb patches in shrub-encroached grasslands (SEGs) in Inner Mongolia, China. Fourteen SEG sites from two ecosystem types (typical and desert grasslands) were investigated. The phospholipid fatty acid (PLFA) method was used to analyze the composition and biomass of the soil microbial community. Our results showed that the top-soil microbial biomass and abundances of gram-negative bacteria, arbuscular mycorrhizal fungi, and actinomycetes were significantly higher in shrub patches than in herb patches in both typical and desert grasslands (P < 0.05). The fungi to bacteria ratio was significantly higher in shrub patches than in herb patches in desert grassland (P < 0.05). The microbial biomass was positively associated with mean annual precipitation, total nitrogen and available phosphorus, and negatively associated with mean annual temperature. Our results also indicated that the variation in microbial composition was largely explained by edaphic factors, followed by climate factors. In conclusion, shrub encroachment in Inner Mongolia grasslands has significantly influenced the structure and abundance of soil microbial communities, which makes the microbial communities toward a fresh organic carbon-based structure. This study highlights the importance of edaphic and climate factors in microbial community shifts in SEGs.

Microbial colonization and controls in dryland systems

USGS Publications Warehouse

Pointing, Stephen B.; Belnap, Jayne

2012-01-01

Drylands constitute the most extensive terrestrial biome, covering more than one-third of the Earth's continental surface. In these environments, stress limits animal and plant life, so life forms that can survive desiccation and then resume growth following subsequent wetting assume the foremost role in ecosystem processes. In this Review, we describe how these organisms assemble in unique soil- and rock-surface communities to form a thin veneer of mostly microbial biomass across hot and cold deserts. These communities mediate inputs and outputs of gases, nutrients and water from desert surfaces, as well as regulating weathering, soil stability, and hydrological and nutrient cycles. The magnitude of regional and global desert-related environmental impacts is affected by these surface communities; here, we also discuss the challenges for incorporating the consideration of these communities and their effects into the management of dryland resources.

Desert soil clay content estimation using reflectance spectroscopy preprocessed by fractional derivative

PubMed Central

Tiyip, Tashpolat; Ding, Jianli; Zhang, Dong; Liu, Wei; Wang, Fei; Tashpolat, Nigara

2017-01-01

Effective pretreatment of spectral reflectance is vital to model accuracy in soil parameter estimation. However, the classic integer derivative has some disadvantages, including spectral information loss and the introduction of high-frequency noise. In this paper, the fractional order derivative algorithm was applied to the pretreatment and partial least squares regression (PLSR) was used to assess the clay content of desert soils. Overall, 103 soil samples were collected from the Ebinur Lake basin in the Xinjiang Uighur Autonomous Region of China, and used as data sets for calibration and validation. Following laboratory measurements of spectral reflectance and clay content, the raw spectral reflectance and absorbance data were treated using the fractional derivative order from the 0.0 to the 2.0 order (order interval: 0.2). The ratio of performance to deviation (RPD), determinant coefficients of calibration (Rc2), root mean square errors of calibration (RMSEC), determinant coefficients of prediction (Rp2), and root mean square errors of prediction (RMSEP) were applied to assess the performance of predicting models. The results showed that models built on the fractional derivative order performed better than when using the classic integer derivative. Comparison of the predictive effects of 22 models for estimating clay content, calibrated by PLSR, showed that those models based on the fractional derivative 1.8 order of spectral reflectance (Rc2 = 0.907, RMSEC = 0.425%, Rp2 = 0.916, RMSEP = 0.364%, and RPD = 2.484 ≥ 2.000) and absorbance (Rc2 = 0.888, RMSEC = 0.446%, Rp2 = 0.918, RMSEP = 0.383% and RPD = 2.511 ≥ 2.000) were most effective. Furthermore, they performed well in quantitative estimations of the clay content of soils in the study area. PMID:28934274

Effect of Shadowing on Survival of Bacteria under Conditions Simulating the Martian Atmosphere and UV Radiation▿ †

PubMed Central

Osman, Shariff; Peeters, Zan; La Duc, Myron T.; Mancinelli, Rocco; Ehrenfreund, Pascale; Venkateswaran, Kasthuri

2008-01-01

Spacecraft-associated spores and four non-spore-forming bacterial isolates were prepared in Atacama Desert soil suspensions and tested both in solution and in a desiccated state to elucidate the shadowing effect of soil particulates on bacterial survival under simulated Martian atmospheric and UV irradiation conditions. All non-spore-forming cells that were prepared in nutrient-depleted, 0.2-μm-filtered desert soil (DSE) microcosms and desiccated for 75 days on aluminum died, whereas cells prepared similarly in 60-μm-filtered desert soil (DS) microcosms survived such conditions. Among the bacterial cells tested, Microbacterium schleiferi and Arthrobacter sp. exhibited elevated resistance to 254-nm UV irradiation (low-pressure Hg lamp), and their survival indices were comparable to those of DS- and DSE-associated Bacillus pumilus spores. Desiccated DSE-associated spores survived exposure to full Martian UV irradiation (200 to 400 nm) for 5 min and were only slightly affected by Martian atmospheric conditions in the absence of UV irradiation. Although prolonged UV irradiation (5 min to 12 h) killed substantial portions of the spores in DSE microcosms (∼5- to 6-log reduction with Martian UV irradiation), dramatic survival of spores was apparent in DS-spore microcosms. The survival of soil-associated wild-type spores under Martian conditions could have repercussions for forward contamination of extraterrestrial environments, especially Mars. PMID:18083857

Interacting vegetative and thermal contributions to water movement in desert soil

USGS Publications Warehouse

Garcia, C.A.; Andraski, Brian J.; Stonestrom, David A.; Cooper, C.A.; Šimůnek, J.; Wheatcraft, S.W.

2011-01-01

Thermally driven water-vapor flow can be an important component of total water movement in bare soil and in deep unsaturated zones, but this process is often neglected when considering the effects of soil–plant–atmosphere interactions on shallow water movement. The objectives of this study were to evaluate the coupled and separate effects of vegetative and thermal-gradient contributions to soil water movement in desert environments. The evaluation was done by comparing a series of simulations with and without vegetation and thermal forcing during a 4.7-yr period (May 2001–December 2005). For vegetated soil, evapotranspiration alone reduced root-zone (upper 1 m) moisture to a minimum value (25 mm) each year under both isothermal and nonisothermal conditions. Variations in the leaf area index altered the minimum storage values by up to 10 mm. For unvegetated isothermal and nonisothermal simulations, root-zone water storage nearly doubled during the simulation period and created a persistent driving force for downward liquid fluxes below the root zone (total net flux ~1 mm). Total soil water movement during the study period was dominated by thermally driven vapor fluxes. Thermally driven vapor flow and condensation supplemented moisture supplies to plant roots during the driest times of each year. The results show how nonisothermal flow is coupled with plant water uptake, potentially influencing ecohydrologic relations in desert environments.

Microbiology and Moisture Uptake of Desert Soils

NASA Astrophysics Data System (ADS)

Kress, M. E.; Bryant, E. P.; Morgan, S. W.; Rech, S.; McKay, C. P.

2005-12-01

We have initiated an interdisciplinary study of the microbiology and water content of desert soils to better understand microbial activity in extreme arid environments. Water is the one constituent that no organism can live without; nevertheless, there are places on Earth with an annual rainfall near zero that do support microbial ecosystems. These hyperarid deserts (e.g. Atacama and the Antarctic Dry Valleys) are the closest terrestrial analogs to Mars, which is the subject of future exploration motivated by the search for life beyond Earth. We are modeling the moisture uptake by soils in hyperarid environments to quantify the environmental constraints that regulate the survival and growth of micro-organisms. Together with the studies of moisture uptake, we are also characterizing the microbial population in these soils using molecular and culturing methods. We are in the process of extracting DNA from these soils using MoBio extraction kits. This DNA will be used as a template to amplify bacterial and eukaryotic ribosomal DNA to determine the diversity of the microbial population. We also have been attempting to determine the density of organisms by culturing on one-half strength R2A agar. The long-range goal of this research is to identify special adaptations of terrestrial life that allow them to inhabit extreme arid environments, while simultaneously quantifying the environmental parameters that enforce limits on these organisms' growth and survival.

Draft Genome Sequence of a Cellulase-Producing Psychrotrophic Paenibacillus Strain, IHB B 3415, Isolated from the Cold Environment of the Western Himalayas, India.

PubMed

Dhar, Hena; Swarnkar, Mohit Kumar; Gulati, Arvind; Singh, Anil Kumar; Kasana, Ramesh Chand

2015-02-19

Paenibacillus sp. strain IHB B 3415 is a cellulase-producing psychrotrophic bacterium isolated from a soil sample from the cold deserts of Himachal Pradesh, India. Here, we report an 8.44-Mb assembly of its genome sequence with a G+C content of 50.77%. The data presented here will provide insights into the mechanisms of cellulose degradation at low temperature. Copyright © 2015 Dhar et al.

Hyperarid Soils in the Atacama Desert: A Terrestrial Guide to Mars Soil Formation

NASA Astrophysics Data System (ADS)

Amundson, R.; Stephanie, E.; Justine, O.; Brad, S.; Nishiizumi, K.; William, D.; Chris, M.

2005-12-01

Hyperarid soils on Earth provide a framework for interpreting the growing Mars regolith database and for developing testable hypotheses for the origin of Mars soils. On Earth, dust and aerosol deposition are strongly coupled with soil formation. Long term atmospheric deposition in the Atacama Desert, coupled with small and highly stochastic rain and fog events, produce a set of soil features diagnostic of pedogenic processes and indicative of the direction of liquid water flow: (1) Extreme hyperaridity results in the retention of nearly all atmospheric inputs within the upper 3 m of the soil profile, but the infrequent rainfall events vertically separate salts by solubility, forming polygonally cracked, sulfate-cemented near-surface crusts which overlie variably concentrated layers of the more soluble chloride, nitrate, and Na-sulfate salts. (2) Pedogenic sulfates in the Atacama desert exhibit unique depth-dependent S, O and Ca isotope trends caused by isotopic fractionation during downward aqueous migration and chemical reaction. (3) Pedogenic sulfates and nitrates contain a distinctive mass independent O isotope signal indicative of a tropospheric origin, and in the case of nitrate, the retention of this signal persists only under near-abiotic conditions. Taken together, the morphology and the depth-dependent chemical and isotopic composition of hyperarid soils provides quantitative information on the origin of solutes, direction of water flow, and degree of biological activity. Depth-dependent measures of these parameters on Mars can therefore be used to test a pedogenic hypothesis for the origin of the widely distributed sulfate layers and can be used to design experiments for future missions that may more fully illuminate the history of Mars surface processes.

Theater of Operations Construction in the Desert. A Handbook of Lessons Learned in the Middle East. Phase I.

DTIC Science & Technology

1981-01-01

moves great amounts of hot, dry air, it severely dehydrates the desert environment. In addition, the wind always carries fine soil particles which abrade...membrane hydrolysis . Manufacturers recommend that feed stream flows not be lower than three-fourths of the nominal design flow. Possible solutions: 1...undergo accelerated decomposition /aging when stored in high desert heat. This is complicated by the fa~t that many of the tests were designed to be

Effects of Vegetation Removal and Soil Disturbance on Soil Organic and Inorganic Carbon Dynamics in California Desert Ecosystems

NASA Astrophysics Data System (ADS)

Swanson, A. C.; Allen, E. B.; Allen, M. F.; Hernandez, R. R.

2015-12-01

Solar energy developments are projected to be deployed over desert wildland areas with deep soil inorganic carbon (SIC) deposits, which often involves elimination of deep-rooted vegetation. This land cover change may systemically alter SIC pools since respired CO2 is the carbon (C) source during SIC formation. We sought to understand how removal of creosote bush scrub affects soil C pools. We hypothesized that vegetation is important for maintaining SIC and soil organic C (SOC) pools and that disturbance to the vegetation and soil will change CO2 flux with increased losses from SIC. Soils were collected from sites that had intact creosote bush scrub habitat adjacent to disturbed, bare areas where the native vegetation had been previously removed. Samples were taken from beneath shrub canopies and interspaces in intact areas, and from random points in the disturbed area. Soils were analyzed for SIC, SOC, microbial and labile C, and δ13C. Soils were also incubated to determine the potential CO2 flux from disturbed and undisturbed soils along with the sources of CO2. Three replicates per soil underwent a control and water addition treatment and flux and δ13C of CO2 were measured continuously. Control replicates yielded no significant CO2 flux. CO2 flux from watered soils was higher beneath shrub canopy (18.57µmol g soil-1 day-1±1.86) than the interspace soils (0.86 µmol g soil-1 day-1±0.17). Soils collected from bare areas had an intermediate flux (5.41 µmol g soil-1 day-1±2.68 and 3.68 µmol g soil-1 day-1±0.85, respectively) lying between shrub canopy and interspace soils. There was no significant difference between the δ13C values of CO2 from shrub canopy and interspace soils, both of which had a very low δ13C values (-22.60‰±0.64 and -23.88‰±0.89, respectively), resembling that of organic C. However, the isotopic values of CO2 from disturbed soils were significantly higher (-16.68‰±1.36 and -15.22‰±2.12, respectively) suggesting that these soils effluxed a greater proportion of CO2 from an inorganic source than intact soils. Microbial and labile C were highest under shrub canopy, intermediate in interspaces, and lowest in bare areas. Vegetation removal to accommodate renewable energy developments may negatively impact soil C, potentially leading to unintended increased soil C losses from the SIC pool.

Community-Based Soil Quality Assessment As a Tool for Designing an Urban Green Infrastructure Network to Manage Runoff.

NASA Astrophysics Data System (ADS)

Klimas, C.; Montgomery, J.

2014-12-01

Green infrastructure (GI) may be the most practical approach for reducing contaminated runoff, providing ecosystem services, mitigating food deserts and creating community open spaces in urban areas. This project was funded by the USEPA's People-Prosperity-Planet (P3) program and was a partnership between a team of DePaul University undergraduates (the P3 team) and high school interns (Green Teens) and staff from the Gary Comer Youth Center (GCYC). GCYC is located in a low-income African-American community on Chicago's south side characterized by high crime, abandoned buildings, lack of green space and a food desert. The overaching project goal was to develop a network of Green Teens qualified to conduct soil quality assessment using USDA-NRCS protocols in order to let them develop GI plans to minimize storm water runoff and contaminant loadings, improve community and environmental health, and provide more equitable access to green space. Working with a USDA-ARS soil scientist from Washington State University, the P3 team conducted soil quality assessment on 116 soil samples collected among four abandoned residential lots owned by GCYC. Analytes included infiltration, bulk density, texture, pH, conductivity, aggregate stability, available nutrients, and total and bioavailable (PBET) lead. Soil pH on all lots is greater than 8.0, are low in organic matter, have little microbial respiration activity, are enriched in available phosphorus, and have average total lead values ranging from 24-2,700 mg/kg. PBET lead was less than 40% on most lots. Regardless, these soils will need to be remediated by adding carbon-rich materials such as biosolids prior to GI installation. Students enrolled in a landscape design course at DePaul developed 3-D models representing potential GI designs for one of the vacant lots that include strategies for immobilizing heavy metals, reducing runoff, and which are tied into an educational module for neighborhood school children.

Soil nitrate nitrogen dynamics after biosolids application in a tobosagrass desert grassland.

PubMed

Jurado-Guerra, Pedro; Wester, David B; Fish, Ernest B

2006-01-01

Dormant-season application of biosolids increases desert grass production more than growing season application in the first growing season after application. Differential patterns of NO3-N (plant available N) release following seasonal biosolids application may explain this response. Experiments were conducted to determine soil nitrate nitrogen dynamics following application of biosolids during two seasons in a tobosagrass [Hilaria mutica (Buckl.) Benth.] Chihuahuan Desert grassland. Biosolids were applied either in the dormant (early April) or growing (early July) season at 0, 18, or 34 dry Mg ha(-1). A polyester-nylon mulch was also applied to serve as a control that approximated the same physical effects on the soil surface as the biosolids but without any chemical effects. Supplemental irrigation was applied to half of the plots. Soil NO3-N was measured at two depths (0-5 and 5-15 cm) underneath biosolids (or mulch) and in interspace positions relative to surface location of biosolids (or mulch). Dormant-season biosolids application significantly increased soil NO3-N during the first growing season, and also increased soil NO3-N throughout the first growing season compared to growing-season biosolids application in a year of higher-than-average spring precipitation. In a year of lower-than-average spring precipitation, season of application did not affect soil NO3-N. Soil NO3-N was higher at both biosolids rates for both seasons of application than in the control treatment. Biosolids increased soil NO3-N compared to the inert mulch. Irrigation did not significantly affect soil NO3-N. Soil NO3-N was not significantly different underneath biosolids and in interspace positions. Surface soil NO3-N was higher during the first year of biosolids application, and subsurface soil NO3-N increased during the second year. Results showed that biosolids rate and season of application affected soil NO3-N measured during the growing season. Under dry spring-normal summer precipitation conditions, season of application did not affect soil NO3-N; in contrast, dormant season application increased soil NO3-N more than growing season application under wet spring-dry summer conditions.

Microbial populations of crude oil spill polluted soils at the Jordan-Iraq desert (the Badia region).

PubMed

Saadoun, Ismail; Mohammad, Munir J; Hameed, Khalid M; Shawaqfah, Mo'ayyad

2008-07-01

Microbial populations' inhabitants in crude petroleum contaminated soils were analyzed in relation with the soil characteristics. A noticeable greater decline of bacterial counts and diversity but a prevalence of the genus Pseudomonas over the other identified genera in the fresh contaminated soils as compared to the old ones was observed.

Soils at the hyperarid margin: The isotopic composition of soil carbonate from the Atacama Desert, Northern Chile

USGS Publications Warehouse

Quade, Jay; Rech, Jason A.; Latorre, Claudio; Betancourt, Julio L.; Gleeson, Erin; Kalin, Mary T.K.

2007-01-01

We evaluate the impact of exceptionally sparse plant cover (0–20%) and rainfall (2–114 mm/yr) on the stable carbon and oxygen composition of soil carbonate along elevation transects in what is among the driest places on the planet, the Atacama Desert in northern Chile. δ13C and δ18O values of carbonates from the Atacama are the highest of any desert in the world. δ13C (VPDB) values from soil carbonate range from -8.2% at the wettest sites to +7.9% at the driest. We measured plant composition and modeled respiration rates required to form these carbonate isotopic values using a modified version of the soil diffusion model of [Cerling (1984) Earth Planet. Sci. Lett.71, 229–240], in which we assumed an exponential form of the soil CO2 production function, and relatively shallow (20–30 cm) average production depths. Overall, we find that respiration rates are the main predictor of the δ13C value of soil carbonate in the Atacama, whereas the fraction C3 to C4 biomass at individual sites has a subordinate influence. The high average δ13C value (+4.1%) of carbonate from the driest study sites indicates it formed&mdahs;perhaps abiotically—in the presence of pure atmospheric CO2. δ18O (VPDB) values from soil carbonate range from -5.9% at the wettest sites to +7.3% at the driest and show much less regular variation with elevation change than δ13C values. δ18O values for soil carbonate predicted from local temperature and δ18O values of rainfall values suggest that extreme (>80% in some cases) soil dewatering by evaporation occurs at most sites prior to carbonate formation. The effects of evaporation compromise the use of δ18O values from ancient soil carbonate to reconstruct paleoelevation in such arid settings.

Biogenic Volatile Organic Compounds as Indicators of Change in a Deep Arid Unsaturated Zone, Amargosa Desert, USA

NASA Astrophysics Data System (ADS)

Green, C. T.; Baker, R. J.; Luo, W.; Andraski, B. J.; Haase, K.; Stonestrom, D. A.

2016-12-01

Biogenic volatile organic compounds (bVOCs) are important agents in atmospheric chemistry, climatic forcing, plant physiology, and ecologic signaling. Despite a marked increase in scientific attention to bVOCs since the 1990s, relatively little is known about bVOC dynamics in soils and virtually nothing is known about bVOCs in deep unsaturated zones. The goal of this study was to systematically explore subsurface bVOCs through characterization and analysis of deep unsaturated zone VOCs in an arid setting. A wide range of VOCs have been sampled from the unsaturated zone at the Amargosa Desert Research Site (ADRS) at least annually for over a decade in the vicinity of a hazardous waste repository in southwestern Nevada. Grid- and transect-based soil gas samples were collected at shallow (0.5-m and 1.5-m) depths, and vertical arrays of samples were collected from three unsaturated zone boreholes ( 10m intervals from 0 to 110 m below ground surface), one of which is in an undisturbed area 3000 m from the waste repository. The VOC data were analyzed to identify bVOCs and processes related to bVOC transport in the deep unsaturated zone. Locally generated bVOCs were identified on the basis of (1) frequency of detections at the remote borehole location, (2) patterns of distribution in shallow unsaturated zone samples around the waste repository, (3) comparisons with atmospheric concentrations, and (4) comparisons with travel blank samples. Several dozen compounds met the criteria to be characterized as bVOCs. The relatively abundant compound m,p-xylene was selected as a tracer for subsequent modeling analysis of vertical and horizontal transport processes in the unsaturated zone. Targeted processes comprised (1) changes in vertical bVOC profiles as a result of ecological shifts, and (2) predominantly horizontal transport of unsaturated-zone gases following installation of the low level nuclear waste repository at the ADRS. To the best of our knowledge the results document, for the first time, the presence of a substantial reservoir of bVOCs in the deep unsaturated zone of a desert ecosystem and demonstrate that such reservoirs can serve as potential windows into past ecological changes and unsaturated zone disturbances.

Patchiness in wind erosion-deposition patterns in response to a recent state change reversal in the Chihuahuan Desert

USDA-ARS?s Scientific Manuscript database

Shifts from shrub-dominated states to grasslands are believed to be irreversible as a result of positive feedbacks between woody plants and soil properties. In the Chihuahuan Desert, mesquite (Prosopis glandulosa) expansion into black grama (Bouteloua eriopoda) grasslands is maintained by wind redis...

Mechanisms for maintenance of dominance in a nonclonal desert shrub

Treesearch

Stanley G. Kitchen; Susan E. Meyer; Stephanie L. Carlson

2015-01-01

Blackbrush (Coleogyne ramosissima: Rosaceae) is a slow-growing, non-clonal shrub that is regionally dominant on xeric, shallow soils in the North American Mojave Desert-Great Basin transition zone and southern Colorado Plateau. Blackbrush seed production is concentrated in mast years, and most seeds are cached and later consumed by heteromyid rodents....

Workload Estimates for Combat Engineers in the Desert.

DTIC Science & Technology

1986-04-01

11111_!2 4 MICROCOP RES LU I N !ESICHR 111112 5 l *. ff APPENDIX B-8 BUILD A PROTECTIVE POSITION FOR A 155-MM TOWED HOWITZER 1. Terrain. Sandy Desert...the repeated cycles of dissolving calcium, silicon, and ferric compounds in the soil, followed by rapid evapora- tion. The result is a cemented top

FIELD SIMULATION OF WET AND DRY YEARS IN THE CHIHUAHUAN DESERT: SOIL MOISTURE, N MINERALIZATION AND ION-EXCHANGE RESIN BAGS

EPA Science Inventory

Irrigation and rain-out shelters were used to simulate precipitation patterns of wet and dry years in the northern Chihuahuan Desert. Irrigation provided approximately double the long-term average monthly precipitation. Rain was excluded during the wet season, July-October, to si...

Identification of dust storm origin in South -West of Iran.

PubMed

Broomandi, Parya; Dabir, Bahram; Bonakdarpour, Babak; Rashidi, Yousef

2017-01-01

Deserts are the main sources of emitted dust, and are highly responsive to wind erosion. Low content of soil moisture and lack of vegetation cover lead to fine particle's release. One of the semi-arid bare lands in Iran, located in the South-West of Iran in Khoozestan province, was selected to investigate Sand and Dust storm potential. This paper focused on the metrological parameters of the sampling site, their changes and the relationship between these changes and dust storm occurrence, estimation of Reconaissance Drought Index, the Atterberg limits of soil samples and their relation with soil erosion ability, the chemical composition, size distribution of soil and airborne dust samples, and estimation of vertical mass flux by COMSALT through considering the effect of saffman force and interparticle cohesion forces during warm period (April-September) in 2010. The chemical compositions are measured with X-ray fluorescence, Atomic absorption spectrophotometer and X-ray diffraction. The particle size distribution analysis was conducted by using Laser particle size and sieve techniques. There was a strong negative correlation between dust storm occurrence and annual and seasonal rainfall and relative humidity. Positive strong correlation between annual and seasonal maximum temperature and dust storm frequency was seen. Estimation of RDI st in the studied period showed an extremely dry condition. Using the results of particle size distribution and soil consistency, the weak structure of soil was represented. X-ray diffraction analyses of soil and dust samples showed that soil mineralogy was dominated mainly by Quartz and calcite. X-ray fluorescence analyses of samples indicated that the most important major oxide compositions of the soil and airborne dust samples were SiO 2 , Al 2 O 3 , CaO, MgO, Na 2 O, and Fe 2 O 3 , demonstrating similar percentages for soil and dust samples. Estimation of Enrichment Factors for all studied trace elements in soil samples showed Br, Cl, Mo, S, Zn, and Hg with EF values higher than 10. The findings, showed the possible correlation between the degree of anthropogenic soil pollutants, and the remains of Iraq-Iran war. The results expressed sand and dust storm emission potential in this area, was illustrated with measured vertical mass fluxes by COMSALT.

Culture-independent analysis of hydrocarbonoclastic bacterial communities in environmental samples during oil-bioremediation.

PubMed

Dashti, Narjes; Ali, Nedaa; Salamah, Samar; Khanafer, Majida; Al-Shamy, Ghada; Al-Awadhi, Husain; Radwan, Samir S

2018-04-15

To analyze microbial communities in environmental samples, this study combined Denaturing Gradient Gel Electrophoresis of amplified 16S rRNA-genes in total genomic DNA extracts from those samples with gene sequencing. The environmental samples studied were oily seawater and soil samples, that had been bioaugmented with natural materials rich in hydrocarbonoclastic bacteria. This molecular approach revealed much more diverse bacterial taxa than the culture-dependent method we had used in an earlier study for the analysis of the same samples. The study described the dynamics of bacterial communities during bioremediation. The main limitation associated with this molecular approach, namely of not distinguishing hydrocarbonoclastic taxa from others, was overcome by consulting the literature for the hydrocarbonoclastic potential of taxa related to those identified in this study. By doing so, it was concluded that the hydrocarbonoclastic bacterial taxa were much more diverse than those captured by the culture-dependent approach. The molecular analysis also revealed the frequent occurrence of nifH-genes in the total genomic DNA extracts of all the studied environmental samples, which reflects a nitrogen-fixation potential. Nitrogen fertilization is long known to enhance microbial oil-bioremediation. The study revealed that bioaugmentation using plant rhizospheres or soil with long history of oil-pollution was more effective in oil-removal in the desert soil than in seawater microcosms. © 2018 The Authors. MicrobiologyOpen published by John Wiley & Sons Ltd.

Don’t bust the biological soil crust: Preserving and restoring an important desert resource

Treesearch

Sue Miller; Steve Warren; Larry St. Clair

2017-01-01

Biological soil crusts are a complex of microscopic organisms growing on the soil surface in many arid and semi-arid ecosystems. These crusts perform the important role of stabilizing soil and reducing or eliminating water and wind erosion. One of the largest threats to biological soil crusts in the arid and semi-arid areas of the western United States is mechanical...

Microbiome analysis and bacterial isolation from Lejía Lake soil in Atacama Desert.

PubMed

Mandakovic, Dinka; Maldonado, Jonathan; Pulgar, Rodrigo; Cabrera, Pablo; Gaete, Alexis; Urtuvia, Viviana; Seeger, Michael; Cambiazo, Verónica; González, Mauricio

2018-07-01

As a consequence of the severe climatic change affecting our entire world, many lakes in the Andes Cordillera are likely to disappear within a few decades. One of these lakes is Lejía Lake, located in the central Atacama Desert. The objectives of this study were: (1) to characterize the bacterial community from Lejía Lake shore soil (LLS) using 16S rRNA sequencing and (2) to test a culture-based approach using a soil extract medium (SEM) to recover soil bacteria. This extreme ecosystem was dominated by three phyla: Bacteroidetes, Proteobacteria, and Firmicutes with 29.2, 28.2 and 28.1% of the relative abundance, respectively. Using SEM, we recovered 7.4% of the operational taxonomic units from LLS, all of which belonged to the same three dominant phyla from LLS (6.9% of Bacteroidetes, 77.6% of Proteobacteria, and 15.3% of Firmicutes). In addition, we used SEM to recover isolates from LLS and supplemented the culture medium with increasing salt concentrations to isolate microbial representatives of salt tolerance (Halomonas spp.). The results of this study complement the list of microbial taxa diversity from the Atacama Desert and assess a pipeline to isolate selective bacteria that could represent useful elements for biotechnological approaches.

Contrasting water use pattern of introduced and native plants in an alpine desert ecosystem, Northeast Qinghai-Tibet Plateau, China.

PubMed

Wu, Huawu; Li, Xiao-Yan; Jiang, Zhiyun; Chen, Huiying; Zhang, Cicheng; Xiao, Xiong

2016-01-15

Plant water use patterns reflect the complex interactions between different functional types and environmental conditions in water-limited ecosystems. However, the mechanisms underlying the water use patterns of plants in the alpine desert of the Qinghai-Tibet Plateau remain poorly understood. This study investigated seasonal variations in the water sources of herbs (Carex moorcroftii, Astragalus adsurgens) and shrubs (Artemisia oxycephala, Hippophae rhamnoides) using stable oxygen-18 isotope methods. The results indicated that the native herbs (C. moorcroftii, A. adsurgens) and one of the shrubs (A. oxycephala) mainly relied on water from the shallow layer (0-30 cm) throughout the growing season, while the introduced shrub (H. rhamnoides) showed plasticity in switching between water from shallow and deep soil layers depending on soil water availability. All studied plants primarily depended on water from shallow soil layers early in the season. The differences of water use patterns between the introduced and native plants are closely linked with the range of active root zones when competing for water. Our findings will facilitate the mechanistic understanding of plant-soil-water relations in alpine desert ecosystems and provide information for screening introduced species for sand fixation. Copyright © 2015 Elsevier B.V. All rights reserved.

Assessment of Evapotranspiration and Soil Moisture Content Across Different Scales of Observation

PubMed Central

Verstraeten, Willem W.; Veroustraete, Frank; Feyen, Jan

2008-01-01

The proper assessment of evapotranspiration and soil moisture content are fundamental in food security research, land management, pollution detection, nutrient flows, (wild-) fire detection, (desert) locust, carbon balance as well as hydrological modelling; etc. This paper takes an extensive, though not exhaustive sample of international scientific literature to discuss different approaches to estimate land surface and ecosystem related evapotranspiration and soil moisture content. This review presents: (i)a summary of the generally accepted cohesion theory of plant water uptake and transport including a shortlist of meteorological and plant factors influencing plant transpiration;(ii)a summary on evapotranspiration assessment at different scales of observation (sap-flow, porometer, lysimeter, field and catchment water balance, Bowen ratio, scintillometer, eddy correlation, Penman-Monteith and related approaches);(iii)a summary on data assimilation schemes conceived to estimate evapotranspiration using optical and thermal remote sensing; and(iv)for soil moisture content, a summary on soil moisture retrieval techniques at different spatial and temporal scales is presented. Concluding remarks on the best available approaches to assess evapotranspiration and soil moisture content with and emphasis on remote sensing data assimilation, are provided. PMID:27879697

Modifying the 'pulse-reserve' paradigm for deserts of North America: precipitation pulses, soil water, and plant responses.

PubMed

Reynolds, James F; Kemp, Paul R; Ogle, Kiona; Fernández, Roberto J

2004-10-01

The 'pulse-reserve' conceptual model--arguably one of the most-cited paradigms in aridland ecology--depicts a simple, direct relationship between rainfall, which triggers pulses of plant growth, and reserves of carbon and energy. While the heuristics of 'pulses', 'triggers' and 'reserves' are intuitive and thus appealing, the value of the paradigm is limited, both as a conceptual model of how pulsed water inputs are translated into primary production and as a framework for developing quantitative models. To overcome these limitations, we propose a revision of the pulse-reserve model that emphasizes the following: (1) what explicitly constitutes a biologically significant 'rainfall pulse', (2) how do rainfall pulses translate into usable 'soil moisture pulses', and (3) how are soil moisture pulses differentially utilized by various plant functional types (FTs) in terms of growth? We explore these questions using the patch arid lands simulation (PALS) model for sites in the Mojave, Sonoran, and Chihuahuan deserts of North America. Our analyses indicate that rainfall variability is best understood in terms of sequences of rainfall events that produce biologically-significant 'pulses' of soil moisture recharge, as opposed to individual rain events. In the desert regions investigated, biologically significant pulses of soil moisture occur in either winter (October-March) or summer (July-September), as determined by the period of activity of the plant FTs. Nevertheless, it is difficult to make generalizations regarding specific growth responses to moisture pulses, because of the strong effects of and interactions between precipitation, antecedent soil moisture, and plant FT responses, all of which vary among deserts and seasons. Our results further suggest that, in most soil types and in most seasons, there is little separation of soil water with depth. Thus, coexistence of plant FTs in a single patch as examined in this PALS study is likely to be fostered by factors that promote: (1) separation of water use over time (seasonal differences in growth), (2) relative differences in the utilization of water in the upper soil layers, or (3) separation in the responses of plant FTs as a function of preceding conditions, i.e., the physiological and morphological readiness of the plant for water-uptake and growth. Finally, the high seasonal and annual variability in soil water recharge and plant growth, which result from the complex interactions that occur as a result of rainfall variability, antecedent soil moisture conditions, nutrient availability, and plant FT composition and cover, call into question the use of simplified vegetation models in forecasting potential impacts of climate change in the arid zones in North America.

Soil respiration at the Amargosa Desert Research site: A section in U.S. Geological Survey Toxic Substances Hydrology Program: Proceedings of the technical meeting, Charleston, South Carolina, March 8-12, 1999: Volume 3 (Part C) (WRI 99-4018C)

USGS Publications Warehouse

Riggs, Alan C.; Striegl, Robert G.; Maestas, Florentino B.; Morganwalp, David W.; Buxton, Herbert T.

1999-01-01

Automated opaque flux-chamber measurements of soil carbon dioxide (CO2) flux (soil respiration) into the atmosphere at the Amargosa Desert Research Site show seasonal and diel cycles of soil respiration that are closely linked with soil temperature and soil moisture. During 1998, soil respiration increased with soil warming through spring, reaching a maximum rate (not counting anomalously high values scattered through the record) of about 0.055 moles CO2 m-2 day-1 around Julian Day 120. Respiration rates then declined along with volumetric soil moisture content, tending to stay at or below about 0.02 moles CO2 per square meter per day (m-2 day -1) for the rest of the year, except after summer rainfalls when respiration sharply increased for short periods. The diel respiration pattern during dry spells is marked by a sharp rise in CO2 flux coincident with steeply rising soil temperatures in the morning, then dropping back to low levels about the time of maximum soil temperature. The reason for this pattern in unclear.

Developing a Metal Proxy for the Rise of Early Terrestrial Life

NASA Astrophysics Data System (ADS)

Rochelle, S. P.; Anbar, A. D.; Hartnett, H. E.; Romaniello, S. J.; Poret-Peterson, A. T.

2015-12-01

Previous work has shown that the presence of biological soil crusts (BSCs) may affect the concentrations of uranium and other transition metals by influencing metal dissolution, solubility, and transport.(1) These effects may provide a proxy for the presence of microbial mat communities in paleosols, possibly constraining the timing of the rise of early terrestrial ecosystems. Thus, in an effort to uncover possible biosignatures, this study examines metal abundances in modern desert BSCs as a possible analogue for early terrestrial life.We present results from a preliminary study comparing crusted and uncrusted soils from a low-desert site near Casa Grande, Arizona. Seventeen 5-cm soil cores were collected and the bulk elemental composition of the top 1 cm of crusted (9 samples) and non-crusted (8 samples) soils were analyzed by quadrupole ICP-MS with a typical measurement precision between 2-5%. Metal concentrations were normalized to aluminum (Al) to minimize dilution effects due to variations in carbonate and quartz content.Although the mean concentrations of nearly all elements were similar in crusted and uncrusted sites, the variability in the normalized concentrations of some of the elements, such as uranium, were different between crusted and uncrusted sites. The average U/Al ratio at the crusted site was 25 ± 1 μg U/ g Al and the average U/Al ratio at the uncrusted site was 27 ± 4 µg U/ g Al. Bartlett's and Levene's tests were used to confirm that the U/Al ratio was significantly more variable in the uncrusted sites as compared to the crusted sites. Iron (Fe), vanadium (V) and cesium (Cs) showed a similar pattern which was significant under Bartlett's but not Levene's test.As U, Fe, and V solubility and transport are redox-sensitive, we hypothesize that their aqueous mobility could have been impacted by diurnal redox swings in the photosynthetic crusts, possibly resulting in the homogenization of local cm-scale variations in background soil concentrations. Future work will test this hypothesis by 1) analyzing samples from a wider range of sites to determine if this pattern is robust and 2) measuring 238U/235U ratios throughout the crust profile to determine if there is evidence for redox-dependent cycling and fractionation of U within modern BSCs.(1) Beraldi-Campesi, H. et al. (2009) Geobiology, 7:348-359.

Abiotic processes are insufficient for fertile island development: A 10-year artificial shrub experiment in a desert grassland

NASA Astrophysics Data System (ADS)

Li, Junran; Gilhooly, William P.; Okin, Gregory S.; Blackwell, John

2017-03-01

The relative importance of biotic and abiotic processes in the development of "fertile islands" in dryland systems has rarely been investigated. Here we approached this question by using artificial shrubs, which exclude plant litter production and soil nutrient uptake, but retain the functions of trapping windblown material, funneling of stemflow, and differential rain splash. We conducted a vegetation manipulation study more than a decade ago in the desert grassland of southern New Mexico and subsequently revisited the site in 2012 and 2015. The results show that no notable soil mounds were observed under the artificial shrubs; however, soil texture under the artificial shrubs has gradually changed to resemble the patterns of soil particle-size distribution under natural shrubs. Our results highlight that with the exclusion of direct biotic additions, soils captured by shrub canopies are not necessarily fertile and thus do not themselves contribute to the development of fertile islands.

Nelson's big horn sheep (Ovis canadensis nelsoni) trample Agassiz's desert tortoise (Gopherus agassizii) burrow at a California wind energy facility

USGS Publications Warehouse

Agha, Mickey; Delaney, David F.; Lovich, Jeffrey E.; Briggs, Jessica; Austin, Meaghan; Price, Steven J.

2015-01-01

Research on interactions between Agassiz's desert tortoises (Gopherus agassizii) and ungulates has focused exclusively on the effects of livestock grazing on tortoises and their habitat (Oldemeyer, 1994). For example, during a 1980 study in San Bernardino County, California, 164 desert tortoise burrows were assessed for vulnerability to trampling by domestic sheep (Ovis aries). Herds of grazing sheep damaged 10% and destroyed 4% of the burrows (Nicholson and Humphreys 1981). In addition, a juvenile desert tortoise was trapped and an adult male was blocked from entering a burrow due to trampling by domestic sheep. Another study found that domestic cattle (Bos taurus) trampled active desert tortoise burrows and vegetation surrounding burrows (Avery and Neibergs 1997). Trampling also has negative impacts on diversity of vegetation and intershrub soil crusts in the desert southwest (Webb and Stielstra 1979). Trampling of important food plants and overgrazing has the potential to create competition between desert tortoises and domestic livestock (Berry 1978; Coombs 1979; Webb and Stielstra 1979).

Composition of aeolian dust in natural traps on isolated surfaces of the central Mojave Desert - Insights to mixing, sources, and nutrient inputs

USGS Publications Warehouse

Reynolds, R.L.; Reheis, M.; Yount, J.; Lamothe, P.

2006-01-01

The recognition and characterization of aeolian dust in soil contribute to a better understanding of landscape and ecosystem dynamics of drylands. Results of this study show that recently deposited dust, sampled in isolated, mostly high-ground settings, is chemically and mineralogically similar on varied geologic substrates over a large area (15 000 km2) in the Mojave Desert. The silt-plus-clay fraction (fines) on these isolated surfaces is closely alike in magnetic-mineral composition, in contrast to greatly dissimilar magnetic compositions of rock surfaces of vastly different lithologies, on which the fines have accumulated. The fines, thus, are predominantly deposited dust. The amounts of potential nutrients in the sampled dust are much more uniform than might be provided by direct, local weathering of bedrock or by dust locally derived from nearby weathered products. The compositional similarity of the dust on these surfaces is interpreted to result from mixing of fines in the atmosphere as well as in fluvial, alluvial, and lacustrine depositional settings prior to dust emission.

Soils of Israel and Their Similarity to Soils of the United States.

DTIC Science & Technology

1981-01-01

Negev , with various sites in the southwestern United States. Comparison is made on the basis of agricultural maps because of the general availability of...genesis. For example, the surface soil within and around the Negev desert is classified as loess (deposited by the wind). Those in the southwestern...11 The Negev ---------------------------------------------------------- 12 SOILS OF ISRAEL--GENERAL

Properties and variability of soil and trench fill at an arid waste-burial site

USGS Publications Warehouse

Andraski, Brian J.

1996-01-01

Arid sites commonly are assumed to be ideal for long-term isolation of wastes. Information on properties and variability of desert soils is limited, however, and little is known about how the natural site environment is altered by installation of a waste facility. During fall construction of two test trenches next to the waste facility on the Amargosa Desert near Beatty, NV, samples were collected to: (i) characterize physical and hydraulic properties of native soil (upper 5 m) and trench fill, (ii) determine effects of trench construction on selected properties and vertical variability of these properties, and (iii) develop conceptual models of vertical variation within the soil profile and trench fill. Water retention was measured to air dryness (ψ = 2 × 106 cm water suction). The 15 300-cm pressure-plate data were omitted from the analysis because water-activity measurements showed the actual suction values were significantly less than the expected 15 300-cm value (avg. difference = 8550 ± 2460 cm water). Trench construction significantly altered properties and variability of the natural site environment. For example, water content ranged from 0.029 to 0.041 m3 m-3 for fill vs. 0.030 to 0.095 m3 m-3 for soil; saturated hydraulic conductivity was ≈ 10-4 cm s-1 for fill vs. 10-2 to ≈ 10-4 cm s-1 for soil. Statistical analyses showed that the native soil may be represented by three major horizontal components and the fill by a single component. Under initial conditions, calculated liquid conductivity (Kl) plus isothermal vapor conductivity (Kv) for the upper two soil layers and the trench fill was ≈ 10-13 cm s-1, and Kl was ≤ Kv. For the deeper (2–5 m) soil, total conductivity was ≈ 10-10 cm s-1, and Kl was >Kv. This study quantitatively describes hydraulic characteristics of a site using data measured across a water-content range that is representative of arid conditions, but is seldom studied.

[Development and succession of artificial biological soil crusts and water holding characteristics of topsoil].

PubMed

Wu, Li; Chen, Xiao-Guo; Zhang, Gao-Ke; Lan, Shu-Bin; Zhang, De-Lu; Hu, Chun-Xiang

2014-03-01

In order to understand the improving effects of cyanobacterial inoculation on water retention of topsoil in desert regions, this work focused on the development and succession of biological soil crusts and water holding characteristics of topsoil after cyanobacterial inoculation in Qubqi Desert. The results showed that after the artificial inoculation of desert cyanobacteria, algal crusts were quickly formed, and in some microenvironments direct succession of the algal crusts to moss crusts occurred after 2-3 years. With the development and succession of biological soil crusts, the topsoil biomass, polysaccharides content, crust thickness and porosity increased, while the soil bulk density decreased. At the same time, with crust development and succession, the topsoil texture became finer and the percents of fine soil particles including silt and clay contents increased, while the percents of coarse soil particles (sand content) decreased proportionately. In addition, it was found that with crust development and succession, the water holding capacity and water content of topsoil showed an increasing trend, namely: moss crust > algal crusts > shifting sand. The water content (or water holding capacity) in algal and moss crusts were 1.1-1.3 and 1.8-2.2 times of those in shifting sand, respectively. Correlation analysis showed that the water holding capacity and water content of topsoil were positively correlated with the crust biomass, polysaccharides content, thickness, bulk density, silt and clay content; while negatively correlated with the porosity and sand content. Furthermore, stepwise regression analysis showed that the main factor affecting water content was the clay content, while that affecting water holding capacity was the porosity.

Ecohydrological interactions within "fairy circles" in the Namib Desert: Revisiting the self-organization hypothesis

NASA Astrophysics Data System (ADS)

Ravi, Sujith; Wang, Lixin; Kaseke, Kudzai Farai; Buynevich, Ilya V.; Marais, Eugene

2017-02-01

Vegetation patterns such as rings, bands, and spots are recurrent characteristics of resource-limited arid and semiarid ecosystems. One of the most recognizable vegetation patterns is the millions of circular patches, often referred to as "fairy circles," within the arid grassland matrix extending over hundreds of kilometers in the Namib Desert. Several modeling studies have highlighted the role of plant-soil interactions in the formation of these fairy circles. However, little is known about the spatial and temporal variabilities of hydrological processes inside a fairy circle. In particular, a detailed field assessment of hydrological and soil properties inside and outside the fairy circles is limited. We conducted extensive measurements of infiltration rate, soil moisture, grass biometric, and sediment grain-size distribution from multiple circles and interspaces in the Namib Desert. Our results indicate that considerable heterogeneity in hydrological processes exists within the fairy circles, resulting from the presence of coarser particles in the inner bare soil areas, whereas concentration of fine soil occurs on the vegetated edges. The trapping of aeolian and water-borne sediments by plants may result in the observed soil textural changes beneath the vegetation, which in turn, explains the heterogeneity in hydrological processes such as infiltration and runoff. Our investigation provides new insights and experimental data on the ecohydrological processes associated with fairy circles, from a less studied location devoid of sand termite activity within the circles. The results seem to provide support to the "self-organization hypothesis" of fairy circle formation attributed to the antiphase spatial biomass-water distributions.

Soil water regulates the control of photosynthesis on diel hysteresis between soil respiration and temperature in a desert shrubland

NASA Astrophysics Data System (ADS)

Wang, Ben; Zha, Tian Shan; Jia, Xin; Gong, Jin Nan; Bourque, Charles; Feng, Wei; Tian, Yun; Wu, Bin; Qing Zhang, Yu; Peltola, Heli

2017-09-01

Explanations for the occurrence of hysteresis (asynchronicity) between diel soil respiration (Rs) and soil temperature (Ts) have evoked both biological and physical mechanisms. The specifics of these explanations, however, tend to vary with the particular ecosystem or biome being investigated. So far, the relative degree of control of biological and physical processes on hysteresis is not clear for drylands. This study examined the seasonal variation in diel hysteresis and its biological control in a desert-shrub ecosystem in northwest (NW) China. The study was based on continuous measurements of Rs, air temperature (Ta), temperature at the soil surface and below (Tsurf and Ts), volumetric soil water content (SWC), and photosynthesis in a dominant desert shrub (i.e., Artemisia ordosica) over an entire year in 2013. Trends in diel Rs were observed to vary with SWC over the growing season (April to October). Diel variations in Rs were more closely associated with variations in Tsurf than with photosynthesis as SWC increased, leading to Rs being in phase with Tsurf, particularly when SWC > 0.08 m3 m-3 (ratio of SWC to soil porosity = 0.26). However, as SWC decreased below 0.08 m3 m-3, diel variations in Rs were more closely related to variations in photosynthesis, leading to pronounced hysteresis between Rs and Tsurf. Incorporating photosynthesis into a Q10-function eliminated 84.2 % of the observed hysteresis, increasing the overall descriptive capability of the function. Our findings highlight a high degree of control by photosynthesis and SWC in regulating seasonal variation in diel hysteresis between Rs and temperature.

Determination of Oxygen Production by Cyanobacteria in Desert Environment Soil

NASA Astrophysics Data System (ADS)

Bueno Prieto, J. E.

2009-12-01

The cyanobacteria have been characterized for being precursor in the production of oxygen. By means of photosynthetic reactions, they provide oxygen to the environment that surrounds them and they capture part of surrounding dioxide of carbon. This way it happened since the primitive Earth until today. Besides, these microorganisms can support the harmful effects of ultraviolet radiation. The presence of cyanobacterias in an environment like a dry tropical bioma, such as the geographical location called Desert of The Tatacoa (Huila - Colombia), is determinant to establish parameters in the search of biological origin of atmospheric oxygen detected in Mars. In that case, I work with a random sample of not rhizospheric soil, taken to 15 cm of depth. After determining the presence of cyanobacterias in the sample, this one was in laboratory to stimulate the oxygen production. The presence of oxygen in Mars is very interesting. Since oxygen gas is very reactive, it disappear if it is not renewed; the possibility that this renovation of oxygen has a biological origin is encouraging, bearing in mind that in a dry environment and high radiation such as the studied one, the production of oxygen by cyanobacterias is notable. Also it is necessary to keep in mind that the existence of cyanobacterias would determine water presence in Mars subsoil and the nutrients cycles renovation. An interesting exploration possibility for some future space probe to Mars might be the study of worldwide distribution of oxygen concentration in this planet and this way, indentify zones suitable for microbian life.

Zeolite Formation and Weathering Processes in Dry Valleys of Antartica: Martian Analogs

NASA Technical Reports Server (NTRS)

Gibson, E. K., Jr.; Wentworth, S. J.; McKay, D. S.; Socki, R. A.

2004-01-01

Terrestrial weathering processes in cold-desert climates such as the Dry Valleys of Antarctica may provide an excellent analog to chemical weathering and diagenesis of soils on Mars. Detailed studies of soil development and the chemical and mineralogical alterations occurring within soil columns in Wright Valley, Antarctica show incredible complexity in the upper meter of soil. Previous workers noted the ice-free Dry Valleys are the best terrestrial approximations to contemporary Mars. Images returned from the Pathfinder and Spirit landers show similarities to surfaces observed within the Dry Valleys. Similarities to Mars that exist in these valleys are: mean temperatures always below freezing (-20 C), no rainfall, sparse snowfall-rapidly removed by sublimation, desiccating winds, diurnal freeze-thaw cycles (even during daylight hours), low humidity, oxidative environment, relatively high solar radiation and low magnetic fields . The Dry Valley soils contain irregular distributions and low abundances of soil microorganisms that are somewhat unusual on Earth. Physical processes-such as sand abrasion-are dominant mechanisms of rock weathering in Antarctica. However, chemical weathering is also an important process even in such extreme climates. For example, ionic migration occurs even in frozen soils along liquid films on individual soil particles. It has also been shown that water with liquid-like properties is present in soils at temperatures on the order of approx.-80 C and it has been observed that the percentage of oxidized iron increases with increasing soil age and enrichments in oxidized iron occurs toward the surface. The presence of evaporates is evident and appear similar to "evaporite sites" within the Pathfinder and Spirit sites. Evaporites indicate ionic migration and chemical activity even in the permanently frozen zone. The presence of evaporates indicates that chemical weathering of rocks and possibly soils has been active. Authogenic zeolites have been identified within the soil columns because they are fragile; i.e. they are euhedral, unabraded, and unfractured, strongly suggesting in situ formation. Their presence in Antarctic samples is another indication that diagenic processes are active in cold-desert environments. The presence of zeolites, and other clays along with halites, sulfates, carbonates, and hydrates are to be expected within the soil columns on Mars at the Gusev and Isidis Planitia regions. The presence of such water-bearing minerals beneath the surface supplies one of the requirements to support biological activity on Mars.

The Presence and Distribution of Salts as a Palaeoprecipitation Proxy in Atacama Soils

NASA Astrophysics Data System (ADS)

McKay, Lucy; Claire, Mark

2016-04-01

The Atacama Desert in northern Chile (17 to 27° S) is the driest and oldest warm desert on Earth and contains unique abundances of atmospherically-derived salts such as nitrate and perchlorate (Ewing et al., 2006; Jackson et al., 2015). Near-surface accumulation of extremely soluble salts indicates a scarcity of long-term precipitation-driven leaching from Atacama soils. The prolonged absence of substantial precipitation has enabled nitrate and perchlorate to accumulate for millions of years to measurable levels, while interacting with occasional rainfall to move vertically through the soil profile. We investigate the near-surface presence and distribution of atmospherically-generated soluble salts at Earth's most arid extreme, aiming to quantify Atacama palaeoprecipitation during the Quaternary. Previous field and modelling studies have revealed a strong correlation between the depth of peak nitrate and past precipitation events in the U.S. desert southwest (Walvoord et al., 2003; Marion et al., 2008). We extend these studies to regions of much lower rainfall, and report the largest ever near-surface concentrations of nitrate and perchlorate in Earth's soils. We present salt distribution profiles from soil pits in six localities, spanning ~1000 km of the south-to-north (27° to 24° S) natural rainfall and ecosystem function gradient that spans the arid to hyperarid transition (from 20 to <1 mm rainfall y-1). Localities include the well-characterised Yungay desert research station, initially declared as the driest place on Earth beyond the limit for microbial life (McKay et al., 2003). Importantly, our nitrate and perchlorate data confirm and extend suspicions that drier localities than Yungay exist (Azua-Bustos et al., 2015). For example, our "km40" site reveals 10 mg/kg of perchlorate at the surface, with a peak of 35 mg/kg at 10 cm depth. At "PONR", perchlorate peaks at >100 mg/kg at 120 cm depth, with an astonishing 22 mg/kg at the surface. In comparison, perchlorate peaks at ~4 mg/kg at 90 cm depth in our Yungay soil profile. Given that perchlorate is the most soluble naturally-existing salt, "km40" and "PONR" indicate a complete lack of recent precipitation and are candidates for the driest place on Earth. We use the numerical model of Marion et al. (2008) to quantitatively constrain the maximum rainfall distributions and event frequencies that are permitted by our measured profiles. Our Atacama soil profiles exhibit vertical variation in their geochemistry, suggesting considerable climatic and precipitation variability in recent years, enabling constraints on both maximum rainfall events and their temporal occurrence. Through geochemistry and modelling, this research identifies a unique quantitative palaeoprecipitation proxy for Earth's driest desert, with significant consequences for understanding and predicting the future ecohydrological cycle in desert ecosystems, as well as for the planet-wide desert on Mars. References Azua-Bustos A., et al., 2015. Environmental Microbiology Reports, 7, pp.388-394 Ewing S.A., et al., 2006. Geochimica et Cosmochimica Acta, 70, pp.5293-5322 Jackson W.A., et al., 2015. Geochimica et Cosmochimica Acta, 164, pp.502-522 Marion G.M., et al., 2008. Journal of Arid Environments, 72, pp.1012-1033 McKay C.P., et al., 2003. Astrobiology, 3, pp.393-406 Walvoord M.A., et al., 2003. Science, 302, pp.1021-1024

Biodiversity analysis of vegetation on the Nevada Test Site

Treesearch

W. K. Ostler; D. J. Hansen

2001-01-01

The Nevada Test Site (NTS) located in south-central Nevada encompasses approximately 3,567 km2 and straddles two major North American deserts, Mojave and Great Basin. Transitional areas between the two desert types have been created by gradients in elevation, precipitation, temperature, and soils. From 1996 to 1998, more than 1,500 ecological landform units were...

Collection Development "Southwest Gardening": The Desert Shall Bloom

ERIC Educational Resources Information Center

Charles, John; Mosley, Shelley; Van Winkle, Sandra

2008-01-01

Gardening in the American Southwest (SW) is an extreme sport. Not only are gardeners challenged by geographic extremes from tropical deserts to subalpine locales, they must also deal with a wide range of climates. Winter in the mountains and higher regions means heavy snows, frozen soils, and temperatures that can dip below zero. In contrast,…

Evolutionary history and functional traits determine the spatial pattern of multifaceted plant diversity in a typical temperate desert disturbed by an expressway.

PubMed

Li, Shuai; Dong, Shikui; Zhang, Xiangfeng; Liu, Shiliang; Shi, Jianbin; Gao, Xiaoxia; Swift, David; Xu, Yudan; Shen, Hao; Yang, Mingyue; Margarida, Canhoto Coxixo Ana

2018-04-20

Temperate desert is one of the globally important biomes with unique and valuable biodiversity, which might be threatened by environmental stresses and human disturbance associated with rapid development. However, few studies have documented the spatial distribution of the multifaceted plant diversity of the temperate desert and their relationships with external impacting factors. We sampled multifaceted plant species diversity including taxonomic diversity, functional diversity and phylogenetic diversity in the Alashan Desert along Beijing-Xinjiang Expressway (G6) in Northern China to identify the key factors and process which regulate the multifaceted plant diversity of the temperate desert. We found that the dynamics of species richness, functional richness, and phylogenetic richness along the elevational gradient corresponded to the unimodal model. Species phylogenetic development shifted from aggregation to divergence, while species functional traits were the opposite along the elevational gradient. The sites at an elevation around 1200-1400 m were the key habitats for the occurrence of high plant diversity including species richness, functional richness and phylogenetic richness. There were no significant differences (p > 0.05) in plant diversity at different distances from the road (500 m, 1000 m and 1500 m) and human disturbances (the distance from the nearest human settlements). Temperature, temperature variability, precipitation, precipitation variability, soil physical and chemistry properties showed no significant effects on plant diversity. It was concluded that evolutionary history and functional traits, not environmental or anthropogenic factors were the key determinants of the pattern of multifaceted plant diversity. Copyright © 2018 Elsevier B.V. All rights reserved.

Continuous measurement of soil evaporation in a drip-irrigated wine vineyard in a desert area

USDA-ARS?s Scientific Manuscript database

Evaporation from the soil surface (E) can be a significant source of water loss in arid areas. In sparsely vegetated systems, E is expected to be a function of soil, climate, irrigation regime, precipitation patterns, and plant canopy development, and will therefore change dynamically at both daily ...

Studies of methane fluxes reveal that desert soils can mitigate global climate change

Treesearch

Jean E. T. McLain; Dean A. Martens

2005-01-01

Moisture limitations have led researchers to believe that semiarid soils are not significant consumers or producers of trace gases, and these regions are often overlooked in greenhouse gas inventories. We are studying environmental influences on soil fluxes of methane (CH4) in southeastern Arizona. We found negligible CH4...

Soil characteristics of the vadose zone in the flood plain of the Tarim River

USDA-ARS?s Scientific Manuscript database

Overflow from rivers plays an important role in ecological conservation. The desert-oasis ecotone in the Tarim River Basin of Northwest China, for example, relies upon overflow from the river to support a diversity of soil, vegetation, and wildlife. There is, however, limited information on soil tex...

Interactions with soils conditioned by different vegetation: a potential explanation of bromus tectorum L. invasion into salt-deserts?

USDA-ARS?s Scientific Manuscript database

Invasion by Bromus tectorum L. may condition the soil and increase nutrient availability. We hypothesized that nutrient poor soils of the arid Honey Lake Valley of northeastern California U.S.A., similar in physical and chemical properties, but conditioned by either B. tectorum, Krascheninniko...

Subsurface Salts in Antarctic Dry Valley Soils

NASA Technical Reports Server (NTRS)

Englert, P.; Bishop, J. L.; Gibson, E. K.; Koeberl, C.

2013-01-01

The distribution of water-soluble ions, major and minor elements, and other parameters were examined to determine the extent and effects of chemical weathering on cold desert soils. Patterns at the study sites support theories of multiple salt forming processes, including marine aerosols and chemical weathering of mafic minerals. Periodic solar-mediated ionization of atmospheric nitrogen might also produce high nitrate concentrations found in older sediments. Chemical weathering, however, was the major contributor of salts in Antarctic Dry Valleys. The Antarctic Dry Valleys represent a unique analog for Mars, as they are extremely cold and dry desert environments. Similarities in the climate, surface geology, and chemical properties of the Dry Valleys to that of Mars imply the possible presence of these soil formation mechanisms on Mars, other planets and icy satellites.

Extremophilic and extremotolerant actinomycetes in different soil types

NASA Astrophysics Data System (ADS)

Zenova, G. M.; Manucharova, N. A.; Zvyagintsev, D. G.

2011-04-01

Problems on the resistance of soil actinomycetes to various environmental factors (pH, salinity, temperature, and moisture) are discussed. Actinomycetes as a special group of prokaryotes were revealed to have a greater range of tolerance to these factors than was thought earlier. The regularities of the distribution of extremophilic and extremotolerant actinomycetes developing in unusual for mycelial bacteria conditions, their structural-functional characteristics, and their taxonomic composition were determined. The predominance of acidophilic representatives of the Micromonospora genus in acid soils (typical peat, soddy-podzolic, and taiga podzol) and the haloalkaliphilic Streptomyces pluricilirescens and S. prunicolor species in desert saline soils are shown. The specific features of the actinomycete complexes on thermal fields of the weakly developed stratified volcanic soils are described. In these complexes, the thermophilic forms were represented only by species of the Micromonospora genus; and the mesophilic forms, by Microbispora species. In the periodically heated desert soils, among the thermophilic actinomycetes, representatives of rare Actinomadura, Saccharopolyspora and Streptosporangium genera along with Streptomyces species were indicated. The mechanisms of the resistance of the actinomycetes to the extreme environmental conditions are discussed.

Subcritical water extractor for Mars analog soil analysis.

PubMed

Amashukeli, Xenia; Grunthaner, Frank J; Patrick, Steven B; Yung, Pun To

2008-06-01

Abstract Technologies that enable rapid and efficient extraction of biomarker compounds from various solid matrices are a critical requirement for the successful implementation of in situ chemical analysis of the martian regolith. Here, we describe a portable subcritical water extractor that mimics multiple organic solvent polarities by tuning the dielectric constant of liquid water through adjustment of temperature and pressure. Soil samples, collected from the Yungay region of the Atacama Desert (martian regolith analogue) in the summer of 2005, were used to test the instrument's performance. The total organic carbon was extracted from the samples at concentrations of 0.2-55.4 parts per million. The extraction data were compared to the total organic carbon content in the bulk soil, which was determined via a standard analytical procedure. The instrument's performance was examined over the temperature range of 25-250 degrees C at a fixed pressure of 20.7 MPa. Under these conditions, water remains in a subcritical fluid state with a dielectric constant varying between approximately 80 (at 25 degrees C) and approximately 30 (at 250 degrees C).

Assessing degradation of abandoned farmlands for conservation of the Monte Desert biome in Argentina.

PubMed

Yannelli, Florencia A; Tabeni, Solana; Mastrantonio, Leandro E; Vezzani, Nazareth

2014-01-01

Land abandonment is a major issue worldwide. In Argentina, the Monte Desert is the most arid rangeland, where the traditional conservation practices are based on successional management of areas excluded to disturbances or abandoned. Some areas subjected to this kind of management may be too degraded, and thus require active restoration. Therefore, the aim of this study was to assess whether passive succession-based management is a suitable approach by evaluating the status of land degradation in a protected area after 17-41 years of farming abandonment. Soil traits and plant growth forms were quantified and compared between sites according to time since abandonment and former land use (cultivation and grazing). Two variables were calculated using the CORINE-CEC method, i.e., potential (PSER) and actual (ASER) soil erosion risk. PSER indicates the erosion risk when no vegetation is present, while ASER includes the protective role of vegetation cover. Results showed that land use history had no significant effect on plant growth forms or soil traits (p > 0.05). After more than 25 years since abandonment of farming activities, soil conditions and vegetation cover had improved, thus having a lower ASER. Nevertheless, the present soil physical crusts may have delayed the full development of vegetation, enhancing erosion processes. Overall, this study indicates that succession-based management may not be the best practice in terms of conservation. Therefore, any effort for conservation in the Monte Desert should contemplate the current status of land degradation and potential vegetation recovery.

Specular reflectance of soiled glass mirrors - Study on the impact of incidence angles

NASA Astrophysics Data System (ADS)

Heimsath, Anna; Lindner, Philip; Klimm, Elisabeth; Schmid, Tobias; Moreno, Karolina Ordonez; Elon, Yehonatan; Am-Shallem, Morag; Nitz, Peter

2016-05-01

The accumulation of dust and soil on the surface of solar reflectors is an important factor reducing the power output of solar power plants. Therefore the effect of accumulated dust on the specular reflectance of solar mirrors should be understood well in order to improve the site-dependent performance prediction. Furthermore, an optimization of the CSP System maintenance, in particular the cleaning cycles, can be achieved. Our measurements show a noticeable decrease of specular reflectance when the angle of incidence is increased. This effect may be explained by shading and blocking mechanisms caused by dirt particles. The main physical causes of radiation loss being absorption and scattering, the near-angle scattering leads to a further decrease of specular reflectance for smaller angles of acceptance. Within this study mirror samples were both outdoor exposed and indoor artificially soiled. For indoor soiling, the mirror samples were artificially soiled in an in-house developed dusting device using both artificial-standardized dust and real dust collected from an arid outdoor test field at the Negev desert. A model function is proposed that approximates the observed reduction of specular reflectance with the incidence angle with a sufficient accuracy and by simple means for this soil type. Hence a first step towards a new approach to improve site dependent performance prediction of solar power plants is taken.

Response of desert biological soil crusts to alterations in precipitation frequency

USGS Publications Warehouse

Belnap, J.; Phillips, S.L.; Miller, M.E.

2004-01-01

Biological soil crusts, a community of cyanobacteria, lichens, and mosses that live on the soil surface, occur in deserts throughout the world. They are a critical component of desert ecosystems, as they are important contributors to soil fertility and stability. Future climate scenarios predict alteration of the timing and amount of precipitation in desert environments. Because biological soil crust organisms are only metabolically active when wet, and as soil surfaces dry quickly in deserts during late spring, summer, and early fall, the amount and timing of precipitation is likely to have significant impacts on the physiological functioning of these communities. Using the three dominant soil crust types found in the western United States, we applied three levels of precipitation frequency (50% below-average, average, and 50% above-average) while maintaining average precipitation amount (therefore changing both timing and size of applied events). We measured the impact of these treatments on photosynthetic performance (as indicated by dark-adapted quantum yield and chlorophyll a concentrations), nitrogenase activity, and the ability of these organisms to maintain concentrations of radiation-protective pigments (scytonemin, beta-carotene, echinenone, xanthophylls, and canthaxanthin). Increased precipitation frequency produced little response after 2.5 months exposure during spring (1 April-15 June) or summer (15 June-31 August). In contrast, most of the above variables had a large, negative response after exposure to increased precipitation frequency for 6 months spring-fall (1 April-31 October) treatment. The crusts dominated by the soil lichen Collema, being dark and protruding above the surface, dried the most rapidly, followed by the dark surface cyanobacterial crusts (Nostoc-Scytonema-Microcoleus), and then by the light cyanobacterial crusts (Microcoleus). This order reflected the magnitude of the observed response: crusts dominated by the lichen Collema showed the largest decline in quantum yield, chlorophyll a, and protective pigments; crusts dominated by Nostoc-Scytonema-Microcoleus showed an intermediate decline in these variables; and the crusts dominated by Microcoleus showed the least negative response. Most previous studies of crust response to radiation stress have been short-term laboratory studies, where organisms were watered and kept under moderate temperatures. Such conditions would give crust organisms access to ample carbon to respond to imposed stresses (e.g., production of UV-protective pigments, replacement of degraded chlorophyll). In contrast, our longer-term study showed that under field conditions of high air temperatures and frequent, small precipitation events, crust organisms appear unable to produce protective pigments in response to radiation stress, as they likely dried more quickly than when they received larger, less frequent events. Reduced activity time likely resulted in less carbon available to produce or repair chlorophyll a and/or protective pigments. Our findings may partially explain the global observation that soil lichen cover and richness declines as the frequency of summer rainfall increases. ?? Springer-Verlag 2003.

Changes in Soil Organic Matter Abundance, Molecular Composition, and Diversity in an Arid Ecosystem in Response to Long-term Elevated CO2 Manipulation.

NASA Astrophysics Data System (ADS)

Hess, N. J.; Tfaily, M.; Evans, R. D.; Koyama, A.

2017-12-01

Little is known about how soils in arid ecosystems will respond to rising atmospheric CO2 concentration yet arid and semi-arid ecosystems cover more than 40% of Earth's land surface. Previous work in the Mojave Desert (Evans et al., 2014 Nature Climate Change) reported higher soil organic carbon (SOC) and total nitrogen (N) concentrations following 10 years exposure to elevated atmospheric CO2 at the Nevada Desert Free-Air-Carbon dioxide-Enrichment (FACE) Facility (NDFF). In this study, we investigated potential mechanisms that resulted in increased SOC and total N accumulation and stabilization using high resolution mass spectrometry at the NDFF site. Samples were collected from soil profiles to 1 m in depth with a 0.2 m a increment under the dominant evergreen shrub Larrea tridentata. The differences in the molecular composition and diversity of soil organic matter (SOM) were more evident in surface soils and declined with depth, and were consistent with higher SOC and total N concentrations under elevated than ambient CO2. Our molecular analysis also suggested increased root exudation and/or microbial necromass from stabilization of labile C and N contributed to SOM and N stocks. Increased microbial activity and metabolism under elevated CO2 compared to ambient plots suggested that elevated CO2 altered microbial carbon (C) use patterns, reflecting changes in the quality and quantity of SOC inputs. We found that plant-derived compounds were primary substrates for microbial activity under elevated CO2 and microbial products were the main constituents of stabilized SOM. Our results suggest that arid ecosystems are a potential large C sink under elevated CO2, give the extensive coverage of the land surface, and that labile compounds are transformed to stable SOM via microbial processes. Arid systems are limited by water, and thus may have a different C storage potential under changing climates than other ecosystems that are limited by nitrogen or phosphorus.

Bacterial diversity and community along the succession of biological soil crusts in the Gurbantunggut Desert, Northern China.

PubMed

Zhang, Bingchang; Kong, Weidong; Wu, Nan; Zhang, Yuanming

2016-06-01

Biological soil crusts (BSCs) are common and play critical roles in semi-arid and arid ecosystems. Bacteria, as an important community in BSCs, play critical roles in biochemical processes. However, how bacterial diversity and community change in different successional stages of BSCs is still unknown. We used 454 pyrosequencing of 16S rRNA to investigate the bacterial composition and community, and the relationships between bacterial composition and environmental factors were also explored. In different successional stages of BSCs, the number of bacteria operational taxonomic units (OTUs) detected in each sample ranged from 2572 to 3157. Proteobacteria, Cyanobacteria, Bacteroidetes were dominant in BSCs, followed by Firmicutes, Acidobacteria, and Actinobacteria. At the successional stages of BSCs, bacterial communities, OTU composition and their relative abundance notably differentiated, and Cyanobacteria, especially Microcoleus vaginatus, dominated algal crust and lichen crust, and were the main C-fixing bacteria in BSCs. Proteobacteria and Bacteroidetes increased with the development of BSCs. OTUs related to Planomicrobium Chinese, Desulfobulbus sp., Desulfomicrobium sp., Arthrobacter sp., and Ahhaerbacter sp. showed higher relative abundance in bare sand than other successional stages of BSCs, while relative abundance of Sphingomonas sp. Niastella sp., Pedobacter, Candidatus solobacter, and Streptophyta increased with the development of BSCs. In successional stages of BSCs, bacterial OTUs composition demonstrated strong correlations with soil nutrients, soil salts, and soil enzymes. Additionally, variation of bacterial composition led to different ecological function. In bare sand, some species were related with mineral metabolism or promoting plant growth, and in algal crust and lichen crust, C-fixing bacteria increased and accumulated C to the desert soil. In later developed stage of BSCs, bacteria related with decomposition of organic matter, such as Sphingomonas sp. Niastella sp., Pedobacter, and Candidatus solobacter increased. Therefore, bacterial community composition and their key ecological roles shifted to the development of BSCs. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Diversity and Contributions to Nitrogen Cycling and Carbon Fixation of Soil Salinity Shaped Microbial Communities in Tarim Basin

PubMed Central

Ren, Min; Zhang, Zhufeng; Wang, Xuelian; Zhou, Zhiwei; Chen, Dong; Zeng, Hui; Zhao, Shumiao; Chen, Lingling; Hu, Yuanliang; Zhang, Changyi; Liang, Yunxiang; She, Qunxin; Zhang, Yi; Peng, Nan

2018-01-01

Arid and semi-arid regions comprise nearly one-fifth of the earth's terrestrial surface. However, the diversities and functions of their soil microbial communities are not well understood, despite microbial ecological importance in driving biogeochemical cycling. Here, we analyzed the geochemistry and microbial communities of the desert soils from Tarim Basin, northwestern China. Our geochemical data indicated half of these soils are saline. Metagenomic analysis showed that bacterial phylotypes (89.72% on average) dominated the community, with relatively small proportions of Archaea (7.36%) and Eukaryota (2.21%). Proteobacteria, Firmicutes, Actinobacteria, and Euryarchaeota were most abundant based on metagenomic data, whereas genes attributed to Proteobacteria, Actinobacteria, Euryarchaeota, and Thaumarchaeota most actively transcribed. The most abundant phylotypes (Halobacterium, Halomonas, Burkholderia, Lactococcus, Clavibacter, Cellulomonas, Actinomycetospora, Beutenbergia, Pseudomonas, and Marinobacter) in each soil sample, based on metagenomic data, contributed marginally to the population of all microbial communities, whereas the putative halophiles, which contributed the most abundant transcripts, were in the majority of the active microbial population and is consistent with the soil salinity. Sample correlation analyses according to the detected and active genotypes showed significant differences, indicating high diversity of microbial communities among the Tarim soil samples. Regarding ecological functions based on the metatranscriptomic data, transcription of genes involved in various steps of nitrogen cycling, as well as carbon fixation, were observed in the tested soil samples. Metatranscriptomic data also indicated that Thaumarchaeota are crucial for ammonia oxidation and Proteobacteria play the most important role in other steps of nitrogen cycle. The reductive TCA pathway and dicarboxylate-hydroxybutyrate cycle attributed to Proteobacteria and Crenarchaeota, respectively, were highly represented in carbon fixation. Our study reveals that the microbial communities could provide carbon and nitrogen nutrients for higher plants in the sandy saline soils of Tarim Basin. PMID:29593680

Vanishing Croplands.

ERIC Educational Resources Information Center

Brown, Lester R.

1978-01-01

Natural soil fertility is now declining on an estimated one-fifth of the world's croplands. Direct evidence of the mounting pressures on the global cropland base is seen in accelerating soil erosion, the spread of deserts, and the loss of cropland to nonfarm uses. (Author/BB)

Modeling nitrate leaching and optimizing water and nitrogen management under irrigated maize in desert oases in Northwestern China.

PubMed

Hu, Kelin; Li, Yong; Chen, Weiping; Chen, Deli; Wei, Yongping; Edis, Robert; Li, Baoguo; Huang, Yuanfang; Zhang, Yuanpei

2010-01-01

Understanding water and N transport through the soil profile is important for efficient irrigation and nutrient management to minimize nitrate leaching to the groundwater, and to promote agricultural sustainable development in desert oases. In this study, a process-based water and nitrogen management model (WNMM) was used to simulate soil water movement, nitrate transport, and crop growth (maize [Zea mays L.]) under desert oasis conditions in northwestern China. The model was calibrated and validated with a field experiment. The model simulation results showed that about 35% of total water input and 58% of the total N input were leached to <1.8 m depth under traditional management practice. Excessive irrigation and N fertilizer application, high nitrate concentration in the irrigation water, together with the sandy soil texture, resulted in large nitrate leaching. Nitrate leaching was significantly reduced under the improved management practice suggested by farm extension personnel; however, the water and nitrate inputs still far exceeded the crop requirements. More than 1700 scenarios combining various types of irrigation and fertilizer practices were simulated. Quantitative analysis was conducted to obtain the best management practices (BMPs) with simultaneous consideration of crop yield, water use efficiency, fertilizer N use efficiency, and nitrate leaching. The results indicated that the BMPs under the specific desert oasis conditions are to irrigate the maize with 600 mm of water in eight times with a single fertilizer application at a rate of 75 kg N ha(-1).

PLUTONIUM UPTAKE AND BEHAVIOR IN PLANTS OF THE DESERT SOUTHWEST: A PRELIMINARY ASSESSMENT

DOE Office of Scientific and Technical Information (OSTI.GOV)

Caldwell, E.; Duff, M.; Ferguson, C.

2011-03-01

Eight species of desert vegetation and associated soils were collected from the Nevada National Security Site (N2S2) and analyzed for 238Pu and 239+240Pu concentrations. Amongst the plant species sampled were: atmospheric elemental accumulators (moss and lichen), the very slow growing, long-lived creosote bush and the rapidly growing, short-lived cheatgrass brome. The diversity of growth strategies provided insight into the geochemical behavior and bio-availability of Pu at the N2S2. The highest concentrations of Pu were measured in the onion moss (24.27 Bq kg-1 238Pu and 52.78 Bq kg-1 239+240Pu) followed by the rimmed navel lichen (8.18 Bq kg-1 and 18.4 Bqmore » kg-1 respectively), pointing to the importance of eolian transport of Pu. Brome and desert globemallow accumulated between 3 and 9 times higher concentrations of Pu than creosote and sage brush species. These results support the importance of species specific elemental accumulation strategies rather than exposure duration as the dominant variable influencing Pu concentrations in these plants. Total vegetation elemental concentrations of Ce, Fe, Al, Sm and others were also analyzed. Strong correlations were observed between Fe and Pu. This supports the conclusion that Pu was accumulated as a consequence of the active accumulation of Fe and other plant required nutrients. Cerium and Pu are considered to be chemical analogs. Strong correlations observed in plants support the conclusion that these elements displayed similar geochemical behavior in the environment as it related to the biochemical uptake process of vegetation. Soils were also sampled in association with vegetation samples. This allowed for the calculation of a concentration ratio (CR). The CR values for Pu in plants were highly influenced by the heterogeneity of Pu distribution among sites. Results from the naturally occurring elements of concern were more evenly distributed between sample sites. This allowed for the development of a pattern of plant species that accumulated Ce, Sm, Fe and Al. The highest accumulators of these elements were onion moss, lichen flowed by brome. The lowest accumulators were creosote bush and fourwing saltbush. This ranked order corresponds to plant accumulations of Pu.« less

Microbial Biomarkers for Native and Agricultural Soil Inputs to Atmospheric Particulate Matter

NASA Astrophysics Data System (ADS)

Fulton, J. M.; Herckes, P.; Fraser, M. P.; Collins, J.; Van Mooy, B. A.

2017-12-01

Intense dust storms (haboobs) erode desert soils and cause dramatic short-term increases in particulate matter (PM) concentration in the atmosphere. Background atmospheric PM levels in the southwestern United States also commonly exceed the National Ambient Air Quality Standards, so episodic haboobs and normal weather patterns both contribute to aeolian transport. We analyzed fine (PM2.5) and coarse (PM>2.5) dust fractions sampled in Tempe, Arizona for molecular biomarkers indicative of dust sourced from either native or agricultural soils. We focused on pigments and intact polar lipids (IPLs) that were also in soil crusts collected in the region. The PM samples were taken during two weeks (23 July to 5 August 2014) that included two haboobs during the first week and mostly calm weather with minor rainfall during the second week. We detected scytonemin, a diagnostic pigment biomarker for cyanobacteria, in all PM>2.5 samples, but its concentration was highest in haboob dust. Similarly, scytonemin was only abundant in PM2.5 samples taken during haboobs. Scytonemin is an important component of native biological soil crusts, protecting the crust community from UV radiation, and is ca. two orders of magnitude less abundant in disturbed agricultural soils. In biological soil crusts, scytonemin is associated with extracellular polysaccharides that are produced by cyanobacteria and bind soil into cohesive crusts. The association between scytonemin and haboobs suggests that native soil erosion is facilitated by high energy, episodic events that overcome crust cohesion. IPLs were abundant in agricultural soil crusts and included phosphatidylethanolamine from soil bacteria and a glucosylceramide from fungi. These compounds had similar concentration in haboob and background dust, suggesting agricultural or otherwise disturbed soils contribute more to ambient dust. In this study, we employed a new high resolution mass spectrometric method that produces molecular formulas and structural information, even at very low abundance. Employing this analysis on atmospheric PM improves our understanding of mechanisms by which soil crust biomarkers are transferred to lake and ocean sediments and can also contribute to source apportionment models for describing atmospheric dust contamination.

Microbial ecology of hot desert edaphic systems.

PubMed

Makhalanyane, Thulani P; Valverde, Angel; Gunnigle, Eoin; Frossard, Aline; Ramond, Jean-Baptiste; Cowan, Don A

2015-03-01

A significant proportion of the Earth's surface is desert or in the process of desertification. The extreme environmental conditions that characterize these areas result in a surface that is essentially barren, with a limited range of higher plants and animals. Microbial communities are probably the dominant drivers of these systems, mediating key ecosystem processes. In this review, we examine the microbial communities of hot desert terrestrial biotopes (including soils, cryptic and refuge niches and plant-root-associated microbes) and the processes that govern their assembly. We also assess the possible effects of global climate change on hot desert microbial communities and the resulting feedback mechanisms. We conclude by discussing current gaps in our understanding of the microbiology of hot deserts and suggest fruitful avenues for future research. © FEMS 2015. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Microbial ecology of extreme environments: Antarctic yeasts and growth in substrate-limited habitats

NASA Technical Reports Server (NTRS)

Vishniac, H. S.

1985-01-01

The high, dry valleys of the Ross Desert of Antarctic, characterized by extremely low temperatures, aridity and a depauperate biota, are used as an analog of the postulated extreme climates of other planetary bodies of the Solar System to test the hypothesis that if life could be supported by Ross, it might be possible where similar conditions prevail. The previously considered sterility of the Ross Desert soil ecosystem has yielded up an indigenous yeast, Cryptoccus vishniacci, which is able to resist the extremes of cold, wet and dry freezing, and long arid periods, while making minimal nutritional demands on the soil.

Calcium Sulfate in Atacama Desert Basalt: A Possible Analog for Bright Material in Adirondack Basalt, Gusev Crater

NASA Technical Reports Server (NTRS)

Sutter, B.; Golden, D. C.; Amundson, R.; Chong-Diaz, G.; Ming, D. W.

2007-01-01

The Atacama Desert in northern Chile is one of the driest deserts on Earth (< 2mm/y). The hyper-arid conditions allow extraordinary accumulations of sulfates, chlorides, and nitrates in Atacama soils. Examining salt accumulations in the Atacama may assist understanding salt accumulations on Mars. Recent work examining sulfate soils on basalt parent material observed white material in the interior vesicles of surface basalt. This is strikingly similar to the bright-white material present in veins and vesicles of the Adirondack basalt rocks at Gusev Crater which are presumed to consist of S, Cl, and/or Br. The abundance of soil gypsum/anhydrite in the area of the Atacama basalt suggested that the white material consisted of calcium sulfate (Ca-SO4) which was later confirmed by SEM/EDS analysis. This work examines the Ca-SO4 of Atacama basalt in an effort to provide insight into the possible nature of the bright material in the Adirondack basalt of Gusev Crater. The objectives of this work are to (i) discuss variations in Ca-SO4 crystal morphology in the vesicles and (ii) examine the Ca-SO4 interaction(s) with the basalt interior.

Use of halophytes to remove carbon from the atmosphere: Results of a demonstration experiment. Final report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Glenn, E.; Olsen, M.; Frye, R.

1994-01-01

The project examined the feasibility of using salt-tolerant plants, halophytes, to sequester large quantities of C from the atmosphere and enhance food production in desert regions of the world by using seawater and other saline water sources for irrigation. Field experiments using 40 ppt seawater in a coastal desert site in Mexico recorded biomass yields of 16.7--34.0 t ha{sup {minus}1} yr{sup {minus}1} and C yields of 5.4--10.1 t ha{sup {minus}1} yr{sup {minus}1}for the best candidate species in the genera Atriplex, Batis, Salicornia, Suaeda and Sesuvium. These yields are comparable to high-yielding forestry and agricultural biomass crops. Irrigation requirements and othermore » costs of production were within the range of conventional crops as well. Laboratory and field experiments showed that seawater had an inhibitory effect on the decomposition of halophyte biomass in soil; hence, a strategy for C sequestration in desert soil was proposed, in which halophyte crop by-products would be returned to the soil to store C while the harvested portions would be used for oilseeds and animal feed.« less

Parameterization of albedo, thermal inertia, and surface roughness of desert scrub/sandy soil surface

NASA Technical Reports Server (NTRS)

Otterman, J.; Mccumber, M.

1986-01-01

Spectral albedo, A sub n, for the direct solar beam is defined as A sub n (r sub i,s, theta sub 0) = r sub i exp(-s tan theta sub 0)1-I(s) where I(s) is the integral over all reflection angles describing the interception by the absorbing plants of the flux reflected from the soil, r sub i soil reflectance, assumed Lambertian, S the projection on a vertical plane of plants per unit surface area, and theta sub 0 is the solar zenith angle. Hemispheric reflectance for the direct solar beam equals 1-I(s) times the reflectance to the zenith. The values of s of 0.1, 0.2, and 0.3 respectively quantify sparse, moderately dense, and very dense desert scrub. Thin plants are assumed to be of negligible thermal inertia, and thus directly yield the absorbed insolation to the atmosphere. Surface thermal inertia is therefore effectively reduced. The ratio of surface roughness height to plant height is parameterized for sparse, moderately dense, and very dense desert-scrub as a function of s based on data expressing the dependence of this ratio on plant silhouette.

Sensitivity of desert cryptograms to air pollutants: soil crusts and rock lichens

USGS Publications Warehouse

Belnap, J.

1991-01-01

Parks throughout the West are being faced with increasing air pollution threats from current or proposed industries near their boundaries. For this reason, it is important to understand the effects these industries may have on desert ecosystems. Rock lichens can be excellent biomonitors, acting as early warning systems of impending damage to other components of the desert ecosystem. Cryptogamic crusts, consisting mostly of cyanobacteria and lichens, may not only be excellent bioindicators, but also are an essential part of the desert ecosystem. Their presence is critical for soil stability as well as for the contribution of nitrogen to the ecosystem in a form available to higher plants. Air pollutants, such as emissions from coal-fired power plants, may threaten the healthy functioning of these non-vascular plants. The purpose of this study is to determine if, in fact, air pollutants do have an impact on the physiological functioning of cryptogamic crusts or rock lichens in desert systems and, if so, to what extent. Some results have already been obtained. Both rock lichens and cryptogamic crusts exhibit physiological damage in the vicinity of the Navajo Generating Station in Page, Arizona. Increased electrolyte leakage and chlorophyll degradation, along with reduced nitrogen fixation, have been found. Preliminary studies comparing sensitivity between substrates indicate that crusts on limestone and sandstone substrates may be more sensitive than those on gypsum.

Assessment of Evapotranspiration and Soil Moisture Content Across Different Scales of Observation.

PubMed

Verstraeten, Willem W; Veroustraete, Frank; Feyen, Jan

2008-01-09

The proper assessment of evapotranspiration and soil moisture content arefundamental in food security research, land management, pollution detection, nutrient flows,(wild-) fire detection, (desert) locust, carbon balance as well as hydrological modelling; etc.This paper takes an extensive, though not exhaustive sample of international scientificliterature to discuss different approaches to estimate land surface and ecosystem relatedevapotranspiration and soil moisture content. This review presents:(i) a summary of the generally accepted cohesion theory of plant water uptake andtransport including a shortlist of meteorological and plant factors influencing planttranspiration;(ii) a summary on evapotranspiration assessment at different scales of observation (sapflow,porometer, lysimeter, field and catchment water balance, Bowen ratio,scintillometer, eddy correlation, Penman-Monteith and related approaches);(iii) a summary on data assimilation schemes conceived to estimate evapotranspirationusing optical and thermal remote sensing; and(iv) for soil moisture content, a summary on soil moisture retrieval techniques atdifferent spatial and temporal scales is presented.Concluding remarks on the best available approaches to assess evapotranspiration and soilmoisture content with and emphasis on remote sensing data assimilation, are provided.

Diversity of soil yeasts isolated from South Victoria Land, Antarctica

USGS Publications Warehouse

Connell, L.; Redman, R.; Craig, S.; Scorzetti, G.; Iszard, M.; Rodriguez, R.

2008-01-01

Unicellular fungi, commonly referred to as yeasts, were found to be components of the culturable soil fungal population in Taylor Valley, Mt. Discovery, Wright Valley, and two mountain peaks of South Victoria Land, Antarctica. Samples were taken from sites spanning a diversity of soil habitats that were not directly associated with vertebrate activity. A large proportion of yeasts isolated in this study were basidiomycetous species (89%), of which 43% may represent undescribed species, demonstrating that culturable yeasts remain incompletely described in these polar desert soils. Cryptococcus species represented the most often isolated genus (33%) followed by Leucosporidium (22%). Principle component analysis and multiple linear regression using stepwise selection was used to model the relation between abiotic variables (principle component 1 and principle component 2 scores) and yeast biodiversity (the number of species present at a given site). These analyses identified soil pH and electrical conductivity as significant predictors of yeast biodiversity. Species-specific PCR primers were designed to rapidly discriminate among the Dioszegia and Leucosporidium species collected in this study. ?? 2008 Springer Science+Business Media, LLC.

Impacts of tracked vehicles on sediment from a desert soil

Treesearch

Erek H. Fuchs; Karl M. Wood; Tim L. Jones; Brent Racher

2003-01-01

Off-road military vehicle traffic is a major consideration in the management of military lands. The objective of this study was to determine the impacts of military tracked M1A1 heavy combat tank vehicles on sediment loss from runoff, surface plant cover, and surface microtopography in a desert military training environment. A randomized block design was used which had...

Ecology of extremophile yeasts

NASA Astrophysics Data System (ADS)

Vishniac, Helen S.

1998-07-01

Capsular Cryptococcus spp. dominate in desert soils. The most extreme conditions are encountered by Cryptococcus vishniacii which dominates in the arid highlands of the Ross desert of Antarctica by virtue of its ability to grow at low temperatures, minimal nutritional requirements, tolerance of low population densities, and survival skills, although this species is neither osmo-nor halotolerant, characters which are associated with higher energy requirements.

Using Rare Earth Element (REE) tracers to identify preferential micro-sites of post-fire aeolian erosion

NASA Astrophysics Data System (ADS)

Van Pelt, R.; Zobeck, T. M.; Barnes, M. A.; Baddock, M.; D'Odorico, P.

2011-12-01

Plant communities in desert environments are spatially anisotropic. Nutrient islands develop below shrub canopies and in the bases of bunch grasses that enhance plant growth and reinforce the spatial anisotropy. Catastrophic disturbance that removes the vegetation such as fire or drought can result in the release of the trapped sediment which becomes redistributed over the landscape by wind and water. We applied Rare Earth Element (REE) tracers to different landscape positions of an anisotropic Northern Chihuahua Desert ecosystem at the Sevilleta National Wildlife Refuge in central New Mexico in an effort to study this process. We delineated three 0.5 m by 6 m plots of desert grassland and three plots of desert grassland-shrubland ecotone. Nitric acid was used to dissolve the REE oxides (Eu2O3, Dy2O3, and Pr6O11) which were then diluted in distilled water to a target concentration of 1 g REE l-1 and applied to the surface at a rate of 4 l m-2. From laboratory column studies using soil collected at the site, we estimated that this would penetrate the surface to a depth of 2.5 cm resulting in a sediment REE concentration of approximately 100 mg kg-1. Eu was applied to bare surfaces between vegetation characterized as sand with a surface covering of gravel, Pr was applied under grass clumps, and Dy was applied under Creosote Bush (Larrea tridentata (DC.). Two replicate 0.25 m2 areas of each surface type were also tagged to obtain a sample of tagged surface sediment for analysis. The area containing the plots was burned by U.S. Fish and Wildlife personnel on April 14, 2010. During the next two days, two grassland plots and two grassland-shrubland ecotone plots were tested by placing a portable boundary layer field wind tunnel over the plots and blowing them with 12 m s-1 wind for 10 minutes during which time a paired set of entrained sediment samples were captured at the outlet of the wind tunnel. This period was followed by a 30 minute test in which clean quartz sand abrader was added to the wind tunnel flow and a second test of 10 minutes with abrader added to the flow. At the end of the first four tests, the wind tunnel cooling system broke and due to the extent of necessary repairs, the last two plots were tested two weeks later. Three paired aeolian sediment samples were collected for each plot tested. The results indicated that in desert grassland, a disproportionate amount of the post-fire sediment is entrained from areas under grass clumps and in grassland-shrubland ecotones, the soil under shrubs is the primary source of entrained sediment followed by areas under grass clumps. The bare surfaces between vegetation produced the least sediment. REEs appear to be a powerful tool for investigating spatial patterns of aeolian processes.

Visualization of soil structure and pore structure modifications by pioneering ground beetles (Cicindelidae) in surface sediments of an artificial catchment

NASA Astrophysics Data System (ADS)

Badorreck, Annika; Gerke, Horst H.; Weller, Ulrich; Vontobel, Peter

2010-05-01

An artificial catchment was constructed to study initial soil and ecosystem development. As a key process, the pore structure dynamics in the soil at the surface strongly influences erosion, infiltration, matter dynamics, and vegetation establishment. Little is known, however, about the first macropore formation in the very early stage. This presentation focuses on observations of soil pore geometry and its effect on water flow at the surface comparing samples from three sites in the catchment and in an adjacent "younger" site composed of comparable sediments. The surface soil was sampled in cylindrical plastic rings (10 cm³) down to 2 cm depth in three replicates each site and six where caves from pioneering ground-dwelling beetles Cicindelidae were found. The samples were scanned with micro-X-ray computed tomography (at UFZ-Halle, Germany) with a resolution of 0.084 mm. The infiltration dynamics were visualized with neutronradiography (at Paul-Scherer-Institute, Switzerland) on slab-type soil samples in 2D. The micro-tomographies exhibit formation of surface sealing whose thickness and intensity vary with silt and clay content. The CT images show several coarser- and finer-textured micro-layers at the sample surfaces that were formed as a consequence of repeated washing in of finer particles in underlying coarser sediment. In micro-depressions, the uppermost layers consist of sorted fine sand and silt due to wind erosion. Similar as for desert pavements, a vesicular pore structure developed in these sediments on top, but also scattered in fine sand- and silt-enriched micro-layers. The ground-dwelling activity of Cicindelidae beetles greatly modifies the soil structure through forming caves in the first centimetres of the soil. Older collapsed caves, which form isolated pores within mixed zones, were also found. The infiltration rates were severely affected both, by surface crusts and activity of ground-dwelling beetles. The observations demonstrate relatively high abiotic and biotic dynamics of soil pore structure in the soil surface even during the very early development stages. The structure formation has potentially great effects on changing runoff and infiltration by forming sealing layers or preferential flow paths.

Changes in Temperature Sensitivity and Activation Energy of Soil Organic Matter Decomposition in Different Qinghai-Tibet Plateau Grasslands.

PubMed

Li, Jie; He, Nianpeng; Wei, Xuehong; Gao, Yang; Zuo, Yao

2015-01-01

Qinghai-Tibet Plateau grasslands are unique geographical regions and store substantial soil organic matter (SOM) in the soil surface, which make them very sensitive to global climate change. Here, we focused on three main grassland types (alpine meadow, steppe, and desert) and conducted a soil incubation experiment at five different temperatures (5, 10, 15, 20, and 25°C) to investigate SOM decomposition rates (R), temperature sensitivity (Q10), and activation energy (Ea). The results showed that grassland type and incubation temperature had significant impact on R (P < 0.001), and the values of R were exponential correlated with incubation temperature in three alpine grasslands. At the same temperature, R was in the following order: alpine meadow > alpinesteppe > alpine desert. The Q10 values differed significantly among different grasslands, and the overall trends were as follows: alpine meadow (1.56 ± 0.09) < alpine steppe (1.88 ± 0.23) < alpine desert (2.39 ± 0.32). Moreover, the Ea values differed significantly across different grassland types (P < 0.001) and increased with increasing incubation time. The exponential negative correlations between Ea and R at 20°C across all grassland types (all Ps < 0.001) indicated that the substrate-quality temperature hypothesis is applicable to the alpine grasslands. Our findings provide new insights for understanding the responses of SOM decomposition and storage to warming scenarios in this Plateau.

[Soil seed bank research in China: present status, progress and challenges].

PubMed

Shen, You-Xin; Zhao, Chun-Yan

2009-02-01

By searching soil seed bank (SSB) papers from http://www.cqvip.com (1989-2006) and Web of Science (1985-2006), the information on SSB density, species richness, and research methods were summarized according to the 29 classified vegetation types in Vegetation of China. In total, the data of 238 sites with 14 vegetation types were collected. The results showed that the research methods adopted by different researchers and the obtained data of SSB density and species richness varied greatly. In related researches, sampling work was mostly conducted in April and October, sampling plot number ranged from 2 to 480, plot area ranged from 78 cm2 to 10,000 cm2, with 10 cm x 10 cm and 20 cm x 20 cm as most common, and total sampling area ranged from 600 cm2 to 500,000 cm2, with the most being 1,000-10,000 cm2. SSB density varied from 8 ind x m(-2) (desert) to 65,355 ind x m(-2) (tropical rain forest), and species richness varied from 1 (secondary bare alkali-saline patch in temperate) to 74 (tropical seasonal rain forest) per site. SSB density and species richness were higher in tropical rain forest and seasonal rain forest than in temperate coniferous forest, and in manmade forest than in agricultural land or barren land. Grassland, desert, and meadow had smaller species richness. In future, the SSB research should be extended both in scope and in deepness, with the focus on the long term research and strategy research of some important ecosystems, and the research should be incorporated into vegetation regeneration and restoration studies. The related methodological research should be also emphasized in the future.

Patrick Megonigal

Science.gov Websites

fun when you add water!" How did you come to love soils? I grew up camping and learned to love forests, marshes, deserts, and other wild places. I fell in love with soils later when I learned that they or wetland to camp in without the soil beneath the landscape. Why is dirt more fun when you add water

Desert and desertification in Iran

NASA Astrophysics Data System (ADS)

Bahrami, M.

2009-04-01

One of the greatest environmental concerns in Iran as in other arid and semiarid countries is the transformation of once productive, or marginally productive, land to deteriorated land and soil unable to support plants and animals. Because the land becomes barren and dry, the process is described as desertification, which occurs as a sequence of events. The area of deserts in Iran is about 340,000 Km2 (less than one fifth of its total area), of which 100,000 Km2 is being used for some cultivation, 120,000 Km2 is subjected to moving sands about 40 % of which is active sand dunes. Most of features and processes usual in world famous deserts are also observed in Iran: low precipitation, high evaporation, poor or lack of vegetation, saline and alkaline soils, low population and small and sparse oases. The deserts of Iran are generally classified in the subtropical, warm, arid and semiarid group, but the effect and presence of some geographical and geoclimatical factors such as height, vicinity to Indian Ocean and so on do some changes in climatic conditions and geographical features causing some local and regional differences in them. Geographically, two groups of deserts have been known in Iran: (1) Coastal deserts which, like a ribbon with variable width, stretch from extreme southeast to extreme southwest, at the north parts of Oman Sea and Persian Gulf. One important feature of these deserts is relatively high humidity which differentiates them from other deserts. This causes an increase in vegetation coverage and hence a decrease in eolian erosion and also a dominance of chemical weathering to that of physical. (2) internal deserts, which rest in central, eastern and southeastern plateau of the country and in independent and semi dependent depressions. This situation, which is due to the surrounding high mountains, blocks humidity entry and causes the aridity of these deserts. Wind as a dominant process in the area causes deflated features such as Reg (desert pavement), Kalut (Yardang), Hoodoo and wind deposited features such as different kinds of sand dunes (Seif, Nebka, Rebdous, Barkhan, Ghourd, Erg) and Loess, most of which exhibit beautiful landscapes suitable for ecotourism and scientific tours. Salt deserts (Kavir or Playas), which rest in the lowest parts of internal depressions, are the most current features in Iran deserts. The most extensive and specific salt deserts are in the course of floods or at the end of them, which consist of fine grained sediments in the lowest parts of the depressions. Many factors have been participated in the formation of salt deserts in Iran, the most important of which, are morphotectonical (such as folding and faulting due to the last epirogenic and orogenic movements), climatical and hydrological (occurred in Quaternary), geological and pedological (such as the presence of Neogene evaporitic formations).

In situ Analysis of Organic Compounds on Mars using Chemical Derivatization and Gas Chromatography Mass Spectrometry

NASA Technical Reports Server (NTRS)

Glavin, D. P.; Buch, A.; Cabane, M.; Coll, P.; Navarro-Gonzalez, R.; Mahaffy, P. R.

2005-01-01

One of the core science objectives of NASA's 2009 Mars Science Laboratory (MSL) mission is to determine the past or present habitability of Mars. The search for key organic compounds relevant to terrestrial life will be an important part of that assessment. We have developed a protocol for the analysis of amino acids and carboxylic acids in Mars analogue materials using gas chromatography mass spectrometry (GCMS). As shown, a variety of carboxylic acids were readily identified in soil collected from the Atacama Desert in Chile at part-per-billion levels by GCMS after extraction and chemical derivatization using the reagent N,N-tert.-butyl (dimethylsilyl) trifluoroacetamide (MTBSTFA). Several derivatized amino acids including glycine and alanine were also detected by GCMS in the Atacama soil at lower concentrations (chromatogram not shown). Lacking derivatization capability, the Viking pyrolysis GCMS instruments could not have detected amino acids and carboxylic acids, since these non-volatile compounds require chemical transformation into volatile species that are stable in a GC column. We are currently optimizing the chemical extraction and derivatization technique for in situ GCMS analysis on Mars. Laboratory results of analyses of Atacama Desert samples and other Mars analogue materials using this protocol will be presented.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Köberl, Martina; White, Richard A.; Erschen, Sabine

Streptomyces sp. strain Wb2n-11, isolated from native desert soil, exhibited broad-spectrum antagonism against plant pathogenic fungi, bacteria and nematodes. The 8.2 Mb draft genome reveals genes putatively responsible for its promising biocontrol activity and genes which enable the soil bacterium to directly interact beneficially with plants.

Fractal Scaling of Particle Size Distribution and Relationships with Topsoil Properties Affected by Biological Soil Crusts

PubMed Central

Gao, Guang-Lei; Ding, Guo-Dong; Wu, Bin; Zhang, Yu-Qing; Qin, Shu-Gao; Zhao, Yuan-Yuan; Bao, Yan-Feng; Liu, Yun-Dong; Wan, Li; Deng, Ji-Feng

2014-01-01

Background Biological soil crusts are common components of desert ecosystem; they cover ground surface and interact with topsoil that contribute to desertification control and degraded land restoration in arid and semiarid regions. Methodology/Principal Findings To distinguish the changes in topsoil affected by biological soil crusts, we compared topsoil properties across three types of successional biological soil crusts (algae, lichens, and mosses crust), as well as the referenced sandland in the Mu Us Desert, Northern China. Relationships between fractal dimensions of soil particle size distribution and selected soil properties were discussed as well. The results indicated that biological soil crusts had significant positive effects on soil physical structure (P<0.05); and soil organic carbon and nutrients showed an upward trend across the successional stages of biological soil crusts. Fractal dimensions ranged from 2.1477 to 2.3032, and significantly linear correlated with selected soil properties (R2 = 0.494∼0.955, P<0.01). Conclusions/Significance Biological soil crusts cause an important increase in soil fertility, and are beneficial to sand fixation, although the process is rather slow. Fractal dimension proves to be a sensitive and useful index for quantifying changes in soil properties that additionally implies desertification. This study will be essential to provide a firm basis for future policy-making on optimal solutions regarding desertification control and assessment, as well as degraded ecosystem restoration in arid and semiarid regions. PMID:24516668

Examining diapirs as a nutrient source for plants in a High Arctic polar desert.

NASA Astrophysics Data System (ADS)

Hardy, Sarah; Siciliano, Steven

2014-05-01

Polar deserts cover a quarter of ice-free land in the Canadian Arctic, yet little is known about the key ecological processes that take place. This understudied ecosystem is becoming increasingly vulnerable to climate change and growth of the natural resource industry. In polar deserts, below ground soil masses called diapirs occur in some patterned ground features such as frost boils. Diapirs are formed above permafrost soil where increases in moisture and temperature stimulate biological activity when thawing occurs to create an organic rich, Bhy horizon. Vascular plants are scarce (< 5% cover) and nutrients for survival are likely supplied by diapirs but this interaction is poorly understood. To determine if diapirs are an important nutrient source, nitrogen and phosphorous were traced from the diapir Bhy to vascular plants using δ15N and δ18O stable isotope signatures. Recent developments have shown that the oxygen isotopes of orthophosphate (18OP) can be used to trace plant-available phosphorous. At a polar desert site at Alexandra Fjord, Canada, diapir (n=12) and non-diapir (n=12) frost boils were identified in 12 blocks with a field-portable vis-NIR (visible and near infrared spectrometer) device. Soil cores and Salix arctica plant tissue were collected from each frost boil for stable isotope analysis. The δ15N of Salix arctica plant tissue (n=144) shows a significant relationship between block location and diapir presence (p=0.003). There was a consistent pattern in average δ15N in plant tissue parts with increasing concentration from leaf, stem to root in all frost boils. There was no significant difference in total plant δ15N between diapir and non-diapir frost boils but δ15N in soil cores will be measured to determine if these signatures are attributed to the Bhy horizon or biological nitrogen fixation. These results highlight the potential for stable isotopes to be used as a nutrient tracer in polar desert ecosystems and further analysis of phosphorous stable isotopes will provide a clearer picture of the role of diapirs as a nutrient source.

Nitrogen fixation and metabolism by groundwater-dependent perennial plants in a hyperarid desert.

PubMed

Arndt, Stefan K; Kahmen, Ansgar; Arampatsis, Christina; Popp, Marianne; Adams, Mark

2004-11-01

The Central Asian Taklamakan desert is characterized by a hyperarid climate with less than 50 mm annual precipitation but a permanent shallow groundwater table. The perched groundwater (2-16 m) could present a reliable and constant source of nitrogen throughout the growing season and help overcome temporal nitrogen limitations that are common in arid environments. We investigated the importance of groundwater and nitrogen fixation in the nitrogen metabolism of desert plants by assessing the possible forms and availability of soil N and atmospheric N and the seasonal variation in concentration as well as isotopic composition of plant N. Water availability was experimentally modified in the desert foreland through simulated flooding to estimate the contribution of surface water and temporally increased soil moisture for nutrient uptake and plant-water relations. The natural vegetation of the Taklamakan desert is dominated by plants with high foliar nitrogen concentrations (2-3% DM) and leaf nitrate reductase activity (NRA) (0.2-1 micromol NO2- g(-1) FW h(-1)). There is little evidence that nitrogen is a limiting resource as all perennial plants exhibited fast rates of growth. The extremely dry soil conditions preclude all but minor contributions of soil N to total plant N so that groundwater is suggested as the dominant source of N with concentrations of 100 microM NO3-. Flood irrigation had little beneficial effect on nitrogen metabolism and growth, further confirming the dependence on groundwater. Nitrogen fixation was determined by the 15N natural abundance method and was a significant component of the N-requirement of the legume Alhagi, the average contribution of biologically fixed nitrogen in Alhagi was 54.8%. But nitrogen fixing plants had little ecological advantage owing to the more or less constant supply of N available from groundwater. From our data we conclude that the perennial species investigated have adapted to the environmental conditions through development of root systems that access groundwater to satisfy demands for both water and nutrients. This is an ecologically favourable strategy since only groundwater is a predictable and stable resource.

Assessing the effects of land use/cover change on carbon dioxide fluxes in a semiarid shrubland

NASA Astrophysics Data System (ADS)

Gong, Tingting; Lei, Huimin; Yang, Dawen; Jiao, Yang; Yang, Hanbo

2017-04-01

Land use/cover change has been generally considered a local environmental issue. Our study focuses on the effects of land use/cover change on the carbon cycle using long-term continuous field observation data, which is measured by the eddy covariance (EC) technique. The study site is at Yulin (38.45N, 109.47E), which is a desert shrubland ecosystem in Mu Us sandland, China. Before June 2012, the vegetation in this site was covered with mixed vegetation: typical desert shrubs (e.g., Salix psammophila and Artemisia ordosica) and grass. After July 2012, a part of the land use/cover condition within the footprint was changed by the local farmers, which converted the land use/cover condition changed first from mixed vegetation to bare soil and then from bare soil to grassland resulting from the re-growing grass. Four-year carbon fluxes are selected and separated into three periods: Period I is from July 1 2011 to June 30 2012 when land use/cover condition did not change; Period II is from July 1 2012 to June 30 2014 when land use/cover condition changed from mixed vegetation (shrubs and grass) to the mix of bare soil and desert shrubs; Period III is from July 1 2014 to June 30 2015 when land use/cover condition changed from the mix of desert shrubs and bare soil to the mix of desert shrubs and re-growing grass. A linear statistical model will be used to evaluate and quantify the effects of land use/cover change on the uptake or release of carbon fluxes (net ecosystem exchange (NEE), ecosystem respiration (Reco) and gross primary production (GPP)). Moreover, this study is expected to get insights into how agricultural cultivation influences on the local carbon balance (e.g., how NEE, Reco and GPP respond to the land use/cover change; Is the annual carbon balance changed during the land use/cover change process; and the contribution of land use/cover change on these changes of carbon fluxes).

Soil, plant, and terrain effects on natural perchlorate distribution in a desert landscape

USGS Publications Warehouse

Andraski, Brian J.; Jackson, W.A.; Welborn, Toby L.; Böhlke, John Karl; Sevanthi, Ritesh; Stonestrom, David A.

2014-01-01

Perchlorate (ClO4−) is a contaminant that occurs naturally throughout the world, but little is known about its distribution and interactions in terrestrial ecosystems. The objectives of this Amargosa Desert, Nevada study were to determine (i) the local-scale distribution of shallow-soil (0–30 cm) ClO4− with respect to shrub proximity (far and near) in three geomorphic settings (shoulder slope, footslope, and valley floor); (ii) the importance of soil, plant, and terrain variables on the hillslope-distribution of shallow-soil and creosote bush [Larrea tridentata (Sessé & Moc. ex DC.) Coville] ClO4−; and (iii) atmospheric (wet plus dry, including dust) deposition of ClO4− in relation to soil and plant reservoirs and cycling. Soil ClO4− ranged from 0.3 to 5.0 μg kg−1. Within settings, valley floor ClO4− was 17× less near shrubs due in part to enhanced leaching, whereas shoulder and footslope values were ∼2× greater near shrubs. Hillslope regression models (soil, R2 = 0.42; leaf, R2 = 0.74) identified topographic and soil effects on ClO4− deposition, transport, and cycling. Selective plant uptake, bioaccumulation, and soil enrichment were evidenced by leaf ClO4− concentrations and Cl−/ClO4− molar ratios that were ∼8000× greater and 40× less, respectively, than soil values. Atmospheric deposition ClO4− flux was 343 mg ha−1 yr−1, ∼10× that for published southwestern wet-deposition fluxes. Creosote bush canopy ClO4− (1310 mg ha−1) was identified as a previously unrecognized but important and active reservoir. Nitrate δ18O analyses of atmospheric deposition and soil supported the leaf-cycled–ClO4− input hypothesis. This study provides basic data on ClO4− distribution and cycling that are pertinent to the assessment of environmental impacts in desert ecosystems and broadly transferable to anthropogenically contaminated systems.

Controls on sediment production in two U.S. deserts

NASA Astrophysics Data System (ADS)

Belnap, Jayne; Walker, Beau J.; Munson, Seth M.; Gill, Richard A.

2014-09-01

Much of the world’s airborne sediment originates from dryland regions. Soil surface disturbances in these regions are ever-increasing due to human activities such as energy and mineral exploration and development, recreation, suburbanization, livestock grazing and cropping. Sediment production can have significant impacts to human health with particles potentially carrying viruses such as Valley Fever or causing asthma or other respiratory diseases. Dust storms can cause decreased visibility at the ground level, resulting in highway accidents, and reduced visual quality in park and wildland airsheds. Sediment production and deposition is also detrimental to ecosystem health, as production reduces soil fertility at its source and can bury plants and other organisms where it is deposited. Therefore, it is important to understand how we can predict what areas are prone to producing sediment emissions both before and after soil surface disturbance. We visited 87 sites in two deserts of the western U.S. that represented a range of soil texture and surface cover types. We used a portable wind tunnel to estimate the threshold friction velocity (TFV) required to initiate sediment transport and the amount of sediment produced by the tunnel at a set wind speed. Wind tunnel runs were done before and after soil surface disturbance with a four-wheel drive vehicle. Results show that most undisturbed desert soils are very stable, especially if covered by rocks or well-developed biological soil crusts, which make them virtually wind-erosion proof. Particles at disturbed sites, in contrast, moved at relatively low wind speeds and produced high amounts of sediment. Silt was an important predictor of TFV and sediment production across all sites, whereas the influence of rock cover and biological soil crusts was site-dependent. Understanding the vulnerability of a site after disturbance is important information for land managers as they plan land use activities and attempt to mitigate the harmful effects that sediment production can have on both human and ecosystem health.

Controls on sediment production in two U.S. deserts

USGS Publications Warehouse

Belnap, Jayne; Walker, Beau J.; Munson, Seth M.; Gill, Richard A.

2014-01-01

Much of the world’s airborne sediment originates from dryland regions. Soil surface disturbances in these regions are ever-increasing due to human activities such as energy and mineral exploration and development, recreation, suburbanization, livestock grazing and cropping. Sediment production can have significant impacts to human health with particles potentially carrying viruses such as Valley Fever or causing asthma or other respiratory diseases. Dust storms can cause decreased visibility at the ground level, resulting in highway accidents, and reduced visual quality in park and wildland airsheds. Sediment production and deposition is also detrimental to ecosystem health, as production reduces soil fertility at its source and can bury plants and other organisms where it is deposited. Therefore, it is important to understand how we can predict what areas are prone to producing sediment emissions both before and after soil surface disturbance. We visited 87 sites in two deserts of the western U.S. that represented a range of soil texture and surface cover types. We used a portable wind tunnel to estimate the threshold friction velocity (TFV) required to initiate sediment transport and the amount of sediment produced by the tunnel at a set wind speed. Wind tunnel runs were done before and after soil surface disturbance with a four-wheel drive vehicle. Results show that most undisturbed desert soils are very stable, especially if covered by rocks or well-developed biological soil crusts, which make them virtually wind-erosion proof. Particles at disturbed sites, in contrast, moved at relatively low wind speeds and produced high amounts of sediment. Silt was an important predictor of TFV and sediment production across all sites, whereas the influence of rock cover and biological soil crusts was site-dependent. Understanding the vulnerability of a site after disturbance is important information for land managers as they plan land use activities and attempt to mitigate the harmful effects that sediment production can have on both human and ecosystem health.

Physiological variation among native and exotic winter annuals associated with microphytic soil crusts in the Mojave Desert

USGS Publications Warehouse

DeFalco, Lesley; Detling, James K.; Tracy, C. Richard; Warren, Steven D.

2001-01-01

Microbiotic crusts are important components of many aridland soils. Research on crusts typically focuses on the increase in soil fertility due to N-fixing micro-organisms, the stabilization of soils against water and wind erosion and the impact of disturbance on N-cycling. The effect of microbiotic crusts on the associated plant community has received little attention. We quantified the influence of crusts on the production, species diversity, nutrient content and water relations of winter annual plant species associated with microbiotic soil crusts in the northeast Mojave Desert. Shoot biomass of winter annuals was 37% greater and plant density was 77% greater on crusts than were biomass and density on soils lacking crust cover (=bare soils). This greater production of annuals on crusts was likely due to enhanced soil conditions including an almost two-fold increase in soil organic matter and inorganic N compared to bare soils. Crusted soils also had 53% greater volumetric water content than bare soils during November and December, the time when winter annuals become established. As plant development progressed into spring, however, soil water availability decreased: More negative plant xylem water potentials were associated with greater plant biomass on crusted soils. Plants associated with microbiotic soil crusts had lower concentrations of N in shoots (mg N g−1 dry mass). However, total shoot N (mg N m−2) was the same in plants growing on the different soil types when biomass production peaked in April. Shoots had similar patterns in their concentration and content of P. Species diversity of annuals was not statistically different between the two soil types. Yet, while native annuals comprised the greatest proportion of shoot biomass on bare soils, exotic forbs and grasses produced more biomass on crusts. Total shoot nutrient content (biomass×concentration) of the two exotic annual species examined was dramatically greater on crusts than bare soils; only one native species had greater shoot content of N and P when growing on crusts than bare soils. Microbiotic crusts appear to increase site fertility in the northeast Mojave Desert, but nutrients and water distributed within a greater biomass of annual plants growing on microbiotic crusts likely resulted in lower concentrations of nutrients in plant tissue and lower xylem pressure potentials than plants growing on bare soils. Exotic annuals growing on crusts appear to respond to the higher N availability by growing faster, potentially outcompeting native annual species.

Colonization Mars-like environment with extreme microalgae

NASA Astrophysics Data System (ADS)

Wang, Gaohong; Li, Xiaoyan; Liu, Yongding; Chen, Lanzhou

2012-07-01

We had investigated the colonization of soils in Mars-like environments in Chinese deserts by phototrophs. Some extreme cyanobacteria and algae strains were collected and mass-cultured in desert regions to investigated their ability to artificially form desert crusts. These crusts had the capacity to resist sand storm erosion after just 15 days of growth. Similar to the surface of some Chinese deserts, the surface of Mars is characterized by a layer of fine dust, which will challenge future human exploration and settlement, particularly in confined spaces such as greenhouses. In this paper we describe experiments on the formation of artificial desert crusts and we discuss the implications of these approaches for the local amelioration of desert conditions on Mars, which is essential to establish CELSS in habitat. These approaches might also be applicable to the interior of lunar habitats. Finally, more ambitiously, our findings may be a first step in addressing the issues of terraforming larger areas of the surface of Mars.

The effect of the halophytic shrub Lycium ruthenium (Mutt) on selected soil properties of a desert ecosystem in central Iran

Treesearch

Gholam Ali Jalali; Hossein Akbarian; Charles Rhoades; Hamed Yousefzadeh

2012-01-01

We compared soil properties beneath naturally-occurring patches of Lycium ruthenicum Murray (fam. Solanaceae) to evaluate the shrub’s potential to improve the fertility of saline soils. Soil pH, total nitrogen and carbon and extractable potassium, magnesium and phosphorus were respectively significantly higher in the A and B horizons of Lycium shrub patches...

Reconstructing rare soil microbial genomes using in situ enrichments and metagenomics

PubMed Central

Delmont, Tom O.; Eren, A. Murat; Maccario, Lorrie; Prestat, Emmanuel; Esen, Özcan C.; Pelletier, Eric; Le Paslier, Denis; Simonet, Pascal; Vogel, Timothy M.

2015-01-01

Despite extensive direct sequencing efforts and advanced analytical tools, reconstructing microbial genomes from soil using metagenomics have been challenging due to the tremendous diversity and relatively uniform distribution of genomes found in this system. Here we used enrichment techniques in an attempt to decrease the complexity of a soil microbiome prior to sequencing by submitting it to a range of physical and chemical stresses in 23 separate microcosms for 4 months. The metagenomic analysis of these microcosms at the end of the treatment yielded 540 Mb of assembly using standard de novo assembly techniques (a total of 559,555 genes and 29,176 functions), from which we could recover novel bacterial genomes, plasmids and phages. The recovered genomes belonged to Leifsonia (n = 2), Rhodanobacter (n = 5), Acidobacteria (n = 2), Sporolactobacillus (n = 2, novel nitrogen fixing taxon), Ktedonobacter (n = 1, second representative of the family Ktedonobacteraceae), Streptomyces (n = 3, novel polyketide synthase modules), and Burkholderia (n = 2, includes mega-plasmids conferring mercury resistance). Assembled genomes averaged to 5.9 Mb, with relative abundances ranging from rare (<0.0001%) to relatively abundant (>0.01%) in the original soil microbiome. Furthermore, we detected them in samples collected from geographically distant locations, particularly more in temperate soils compared to samples originating from high-latitude soils and deserts. To the best of our knowledge, this study is the first successful attempt to assemble multiple bacterial genomes directly from a soil sample. Our findings demonstrate that developing pertinent enrichment conditions can stimulate environmental genomic discoveries that would have been impossible to achieve with canonical approaches that focus solely upon post-sequencing data treatment. PMID:25983722

Localization and Speciation of Arsenic in Soil and Desert Plant Parkinsonia florida using μXRF and μXANES

PubMed Central

Castillo-Michel, Hiram; Hernandez-Viezcas, Jose; Dokken, Kenneth M.; Marcus, Matthew A.; Peralta-Videa, Jose R.; Gardea-Torresdey, Jorge L.

2011-01-01

Parkinsonia florida is a plant species native to the semi-desert regions of North America. The cultivation characteristics of this shrub/tree suggest that it could be used for phytoremediation purposes in semiarid regions. This work describes, through the use of synchrotron μXRF and μXANES techniques and ICP-OES, the arsenic (As) accumulation and distribution in P. florida plants grown in two soils spiked with As at 20 mg kg-1. Plants grown in a sandy soil accumulated at least twice more As in the roots compared to plants grown in a loamy soil. The lower As accumulation in plants grown in the loamy soil corresponded to a lower concentration of As in the water soluble fraction (WSF) of this soil. LC-ICP-MS speciation analysis showed only As(V) in the WSF from all treatments. In contrast, linear combination XANES speciation analysis from the root tissues showed As mainly present in the reduced As(III) form. Moreover, a fraction of the reduced As was found coordinating to S in a form consistent with As-Cys3. The percentage of As coordinated to sulfur was smaller for plants grown in the loamy soil when compared to the sandy soil. PMID:21842861

Seed reserves diluted during surface soil reclamation in eastern Mojave Desert

USGS Publications Warehouse

Scoles-Sciulla, S. J.; DeFalco, L.A.

2009-01-01

Surface soil reclamation is used to increase the re-establishment of native vegetation following disturbance through preservation and eventual replacement of the indigenous seed reserves. Employed widely in the mining industry, soil reclamation has had variable success in re-establishing native vegetation in arid and semi-arid regions. We tested whether variable success could be due in part to a decrease of seed reserves during the reclamation process by measuring the change in abundance of germinable seed when surface soil was mechanically collected, stored in a soil pile for 4 months, and reapplied upon completion of a roadway. Overall seed reserve declines amounted to 86% of the original germinable seed in the soil. The greatest decrease in seed reserves occurred during soil collection (79% of original reserves), compared to the storage and reapplication stages. At nearby sites where stored surface soil had been reapplied, no perennial plant cover occurred from 0.5 to 5 years after application and <1% cover after 7 years compared to 5% cover in nearby undisturbed areas. The reduction in abundance of germinable seed during reclamation was primarily due to dilution of seed reserves when deeper soil fractions without seed were mixed with the surface soil during collection. Unless more precise techniques of surface soil collection are utilized, soil reclamation alone as a means for preserving native seed reserves is a method ill-suited for revegetating disturbed soils with a shallow seed bank, such as those found in the Mojave Desert. Copyright ?? Taylor & Francis Group, LLC.

New method for estimating bacterial cell abundances in natural samples by use of sublimation

NASA Technical Reports Server (NTRS)

Glavin, Daniel P.; Cleaves, H. James; Schubert, Michael; Aubrey, Andrew; Bada, Jeffrey L.

2004-01-01

We have developed a new method based on the sublimation of adenine from Escherichia coli to estimate bacterial cell counts in natural samples. To demonstrate this technique, several types of natural samples, including beach sand, seawater, deep-sea sediment, and two soil samples from the Atacama Desert, were heated to a temperature of 500 degrees C for several seconds under reduced pressure. The sublimate was collected on a cold finger, and the amount of adenine released from the samples was then determined by high-performance liquid chromatography with UV absorbance detection. Based on the total amount of adenine recovered from DNA and RNA in these samples, we estimated bacterial cell counts ranging from approximately 10(5) to 10(9) E. coli cell equivalents per gram. For most of these samples, the sublimation-based cell counts were in agreement with total bacterial counts obtained by traditional DAPI (4,6-diamidino-2-phenylindole) staining.

The role of water tracks in altering biotic and abiotic soil properties and processes in a polar desert in Antarctica

NASA Astrophysics Data System (ADS)

Ball, Becky A.; Levy, Joseph

2015-02-01

Groundwater discharge via water tracks is a largely unexplored passageway routing salts and moisture from high elevations to valley floors in the McMurdo Dry Valleys (MDV) of Antarctica. Given the influence that water tracks have on the distribution of liquid water in seasonally thawed Antarctic soils, it is surprising how little is known about their role in structuring biotic and abiotic processes this cold desert ecosystem. Particularly, it is unclear how soil biota will respond to the activation of new water tracks resulting from enhanced active layer thickening or enhanced regional snowmelt. In the MDV, water tracks are both wetter and more saline than the surrounding soils, constituting a change in soil habitat suitability for soil biology and therefore the ecological processes they carry out. To investigate the net impact that water tracks have on Dry Valley soil biology, and therefore the ecosystem processes for which they are responsible, we analyzed microbial biomass and activity in soils inside and outside of three water tracks and relate this to the physical soil characteristics. Overall, our results suggest that water tracks can significantly influence soil properties, which can further impact biological biovolume and both biotic and abiotic fluxes of CO2. However, the nature of its impact differs with water track, further suggesting that not all water tracks can be regarded the same.

Size Distribution, Chemical Composition and Optical Properties of Atmospheric Dust in Israel: A Comparison of Urban and Desert Aerosols under Clear and Dusty Conditions.

DTIC Science & Technology

1980-02-01

size distribution and aerosol particle concentrations during a winter period in Mitzpe Ramon. Negev desert. Fig. 5 Comparison of normalized frequency...Israel. The upper two samples are from Mitzpe Ramon in the Negev desert. The bottom three are from Tel Aviv. The lighter of the three Tel Aviv samples (the...shown show much higher imaginary indices than do those from the Negev desert or the two American desert localities (Lindberg et al., 1976). Fig. 12

Hunting for cultivable Micromonospora strains in soils of the Atacama Desert.

PubMed

Carro, Lorena; Razmilic, Valeria; Nouioui, Imen; Richardson, Lee; Pan, Che; Golinska, Patrycja; Asenjo, Juan A; Bull, Alan T; Klenk, Hans-Peter; Goodfellow, Michael

2018-02-26

Innovative procedures were used to selectively isolate small numbers of Micromonospora strains from extreme hyper-arid and high altitude Atacama Desert soils. Micromonosporae were recognised on isolation plates by their ability to produce filamentous microcolonies that were strongly attached to the agar. Most of the isolates formed characteristic orange colonies that lacked aerial hyphae and turned black on spore formation, whereas those from the high altitude soil were dry, blue-green and covered by white aerial hyphae. The isolates were assigned to seven multi- and eleven single-membered groups based on BOX-PCR profiles. Representatives of the groups were assigned to either multi-membered clades that also contained marker strains or formed distinct phyletic lines in the Micromonospora 16S rRNA gene tree; many of the isolates were considered to be putatively novel species of Micromonospora. Most of the isolates from the high altitude soils showed activity against wild type strains of Bacillus subtilis and Pseudomonas fluorescens while those from the rhizosphere of Parastrephia quadrangulares and from the Lomas Bayas hyper-arid soil showed resistance to UV radiation.

[Functions of different cultivation modes in oasis agriculture on soil wind erosion control and soil moisture conservation].

PubMed

Su, Peixi; Zhao, Aifen; Du, Mingwu

2004-09-01

During 2001-2002, the effects of different cultivation modes including winter irrigation and zero tillage, crop-grass intercropping, and early spring film mulching on sand entrainment, wind velocity gradient and soil moisture conservation were studied in the middle reaches of the Heihe River in the Hexi Corridor region. The results showed that all these modes could reduce soil wind erosion and halt sand entrainment to different degrees. Compared with the bare fields exposed by spring plowing, early spring film mulching could increase soil moisture storage by 35.6%. At present, spring plowing and sowing was a main factor responsible to the occurrence of sand storms and the increase in suspended dust content. Farmlands in the upper and middle reaches of the Heihe River generally produced a dust transport up to 4.8-6.0 million tons per year, which was higher than that of sandy desert in the same region. In the Hexi Corridor region, the suspended dust amount produced from 1 hm2 farmland was equivalent to that of 1.5 hm2 desert.

Physiological variation among native and exotic winter annual plants associated with microbiotic crusts in the Mojave Desert

USGS Publications Warehouse

DeFalco, L.A.; Detling, J.K.; Tracy, C.R.; Warren, S.D.

2001-01-01

Microbiotic crusts are important components of many aridland soils. Research on crusts typically focuses on the increase in soil fertility due to N-fixing micro-organisms, the stabilization of soils against water and wind erosion and the impact of disturbance on N-cycling. The effect of microbiotic crusts on the associated plant community has received little attention. We quantified the influence of crusts on the production, species diversity, nutrient content and water relations of winter annual plant species associated with microbiotic soil crusts in the northeast Mojave Desert. Shoot biomass of winter annuals was 37% greater and plant density was 77% greater on crusts than were biomass and density on soils lacking crust cover (=bare soils). This greater production of annuals on crusts was likely due to enhanced soil conditions including an almost two-fold increase in soil organic matter and inorganic N compared to bare soils. Crusted soils also had 53% greater volumetric water content than bare soils during November and December, the time when winter annuals become established. As plant development progressed into spring, however, soil water availability decreased: More negative plant xylem water potentials were associated with greater plant biomass on crusted soils. Plants associated with microbiotic soil crusts had lower concentrations of N in shoots (mg N g-1 dry mass). However, total shoot N (mg N m-2) was the same in plants growing on the different soil types when biomass production peaked in April. Shoots had similar patterns in their concentration and content of P. Species diversity of annuals was not statistically different between the two soil types. Yet, while native annuals comprised the greatest proportion of shoot biomass on bare soils, exotic forbs and grasses produced more biomass on crusts. Total shoot nutrient content (biomass x concentration) of the two exotic annual species examined was dramatically greater on crusts than bare soils; only one native species had greater shoot content of N and P when growing on crusts than bare soils. Microbiotic crusts appear to increase site fertility in the northeast Mojave Desert, but nutrients and water distributed within a greater biomass of annual plants growing on microbiotic crusts likely resulted in lower concentrations of nutrients in plant tissue and lower xylem pressure potentials than plants growing on bare soils. Exotic annuals growing on crusts appear to respond to the higher N availability by growing faster, potentially outcompeting native annual species.

Long-term fate of depleted uranium at Aberdeen and Yuma Proving Grounds

DOE Office of Scientific and Technical Information (OSTI.GOV)

Ebinger, M.H.; Essington, E.H.; Gladney, E.S.

1990-06-01

The environmental fate of fragments of depleted uranium (DU) penetrators in soils and waters at Aberdeen Proving Ground (APG) and Yuma Proving Ground (YPG) is a concern to the Testing and Evaluation Command (TECOM) of the US Army. This report presents the information from preliminary soil and water samples that were collected from the humid woodlands of APG and the arid Sonoran Desert of YPG. Soil samples collected beneath a penetrator fragment of the firing range at APG showed approximately 12% DU by weight in the surface horizon and DU significantly above background to a depth of about 20 cm.more » Samples of surface water at APG showed U only at background levels, and bottom sediments showed background U levels but with isotopic ratios of DU instead of natural U. Soil samples beneath a penetrator fragment at YPG showed about 0.5% by weight U in the surface horizon, but only background concentrations and isotopic ratios of U between 8 and 20 cm depth. Results from this preliminary study indicate that DU at APG was redistributed primarily be dissolution and transport with water and possibly by migration of DU colloids or DU attached to small particles. Redistribution at YPG, however, was mainly due to erosion of DU fragments from the impact area and redeposition in washes that drain the area. Proposed work for FY90-FY92 includes additional field sampling, laboratory column studies, and the development of a computer model of DU redistribution at both sites. 39 refs., 11 figs., 5 tabs.« less

SOIL MICROTOPOGRAPHY ON GRAZING GRADIENTS IN CHIHUAHUAN DESERT GRASSLANDS

EPA Science Inventory

We tested the hypothesis that one of the significant impacts of livestock in the creation of
piospheres centered on water points is the loss of soil microtopography. The size, height, and spatial distribution of micromounds and surrounding depressions were measured by a modi...

Surficial and bedrock geologic map database of the Kelso 7.5 Minute quadrangle, San Bernardino County, California

USGS Publications Warehouse

Bedford, David R.

2003-01-01

This geologic map database describes geologic materials for the Kelso 7.5 Minute Quadrangle, San Bernardino County, California. The area lies in eastern Mojave Desert of California, within the Mojave National Preserve (a unit of the National Parks system). Geologic deposits in the area consist of Proterozoic metamorphic rocks, Cambrian-Neoproterozoic sedimentary rocks, Mesozoic plutonic and hypabyssal rocks, Tertiary basin fill, and Quaternary surficial deposits. Bedrock deposits are described by composition, texture, and stratigraphic relationships. Quaternary surficial deposits are classified into soil-geomorphic surfaces based on soil characteristics, inset relationships, and geomorphic expression. The surficial geology presented in this report is especially useful to understand, and extrapolate, physical properties that influence surface conditions, and surface- and soil-water dynamics. Physical characteristics such as pavement development, soil horizonation, and hydraulic characteristics have shown to be some of the primary drivers of ecologic dynamics, including recovery of those ecosystems to anthropogenic disturbance, in the eastern Mojave Desert and other arid and semi-arid environments.

Distribution and abundance of soil arthropods in the northern Mojave desert

DOE Office of Scientific and Technical Information (OSTI.GOV)

Franco, P.J.; Edney, E.B.; McBrayer, J.F.

1979-03-01

Arthropods were extracted from soil samples taken from around four perennial plant species in Rock Valley, Nevada from January to December 1975. The pattern of distribution of the anthropods about the shrubs is described and a model has been constructed to estimate population densities and biomasses. Total arthropod densities ranged from 1600 per m/sup 2/ in July to 12,400 per m/sup 2/ in December. Total biomass was also lowest in July, 8.7 mg/m/sup 2/, and reached 37.2 mg/m/sup 2/ in May. The majority of animals collected belonged to the Acari, and of these the Cryptostigmata and the prostigmatid families, Nanorchestidaemore » and Tydeidae, were most abundant. Seasonal variations in the distribution patterns are discussed.« less

Vascular plants of the Nevada Test Site and Central-Southern Nevada: ecologic and geographic distributions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Beatley, J.C.

1976-01-01

The physical environment of the Nevada Test Site and surrounding area is described with regard to physiography, geology, soils, and climate. A discussion of plant associations is given for the Mojave Desert, Transition Desert, and Great Basin Desert. The vegetation of disturbed sites is discussed with regard to introduced species as well as endangered and threatened species. Collections of vascular plants were made during 1959 to 1975. The plants, belonging to 1093 taxa and 98 families are listed together with information concerning ecologic and geographic distributions. Indexes to families, genera, and species are included. (HLW)

Soil-geomorphic significance of land surface characteristics in an arid mountain range, Mojave Desert, USA

USGS Publications Warehouse

Hirmas, D.R.; Graham, R.C.; Kendrick, K.J.

2011-01-01

Mountains comprise an extensive and visually prominent portion of the landscape in the Mojave Desert, California. Landform surface properties influence the role these mountains have in geomorphic processes such as dust flux and surface hydrology across the region. The primary goal of this study was to describe and quantify land surface properties of arid-mountain landforms as a step toward unraveling the role these properties have in soil-geomorphic processes. As part of a larger soil-geomorphic study, four major landform types were identified within the southern Fry Mountains in the southwestern Mojave Desert on the basis of topography and landscape position: mountaintop, mountainflank, mountainflat (intra-range low-relief surface), and mountainbase. A suite of rock, vegetation, and morphometric land surface characteristic variables was measured at each of 65 locations across the study area, which included an associated piedmont and playa. Our findings show that despite the variation within types, landforms have distinct land surface properties that likely control soil-geomorphic processes. We hypothesize that surface expression influences a feedback process at this site where water transports sediment to low lying areas on the landscape and wind carries dust and soluble salts to the mountains where they are washed between rocks, incorporated into the soil, and retained as relatively long-term storage. Recent land-based video and satellite photographs of the dust cloud emanating from the Sierra Cucapá Mountains in response to the 7.2-magnitude earthquake near Mexicali, Mexico, support the hypothesis that these landforms are massive repositories of dust.

Root distribution of Nitraria sibirica with seasonally varying water sources in a desert habitat.

PubMed

Zhou, Hai; Zhao, Wenzhi; Zheng, Xinjun; Li, Shoujuan

2015-07-01

In water-limited environments, the water sources used by desert shrubs are critical to understanding hydrological processes. Here we studied the oxygen stable isotope ratios (δ (18)O) of stem water of Nitraria sibirica as well as those of precipitation, groundwater and soil water from different layers to identify the possible water sources for the shrub. The results showed that the shrub used a mixture of soil water, recent precipitation and groundwater, with shallow lateral roots and deeply penetrating tap (sinker) roots, in different seasons. During the wet period (in spring), a large proportion of stem water in N. sibirica was from snow melt and recent precipitation, but use of these sources declined sharply with the decreasing summer rain at the site. At the height of summer, N. sibirica mainly utilized deep soil water from its tap roots, not only supporting the growth of shoots but also keeping the shallow lateral roots well-hydrated. This flexibility allowed the plants to maintain normal metabolic processes during prolonged periods when little precipitation occurs and upper soil layers become extremely dry. With the increase in precipitation that occurs as winter approaches, the percentage of water in the stem base of a plant derived from the tap roots (deep soil water or ground water) decreased again. These results suggested that the shrub's root distribution and morphology were the most important determinants of its ability to utilize different water sources, and that its adjustment to water availability was significant for acclimation to the desert habitat.

[Landscape pattern and productivity characteristics of the oasis landscape ecosystem in Linze, Gansu, China].

PubMed

Liu, Xuelu; Ren, Jizhou; Zhang, Zihe

2002-08-01

Oasis landscape ecosystem is composed of 10 landscape elements, i.e., residence land, cultivated land, grassland, forestland, water area, water system, road, rocky desert, sandy desert, and gravel desert. Among the elements, cultivated land formed by human being production covers the most of the area, is most connected, and hence, is the matrix of the oasis landscape ecosystem. Residence land, grassland, forestland, water area, rocky desert, sandy desert, and gravel desert are patches. Residence land and forestland generate from human being production, while rocky desert, gravel desert and sandy desert are the remnant with the human being disturbance. Water region and grassland are the environmental resources remnant after natural disturbance. Water system and road are corridors. Cultivated land dominated in plant production should be utilized with more productive layers through developing animal production other than expanding used-area to maintain the landscape heterogeneity and diversity of the oasis landscape ecosystem. For remnant and environmental resource patches, it should be profitable in preserving and stabilizing landscape heterogeneity and diversity, exploiting the functions of water and soil conservation, tourism, windbreak and sand fixation. For landscape elements remnant only, it should be fruitful in avoiding degeneration of the landscape pattern to explore their preceding plant production with moderate plant production.

Is climate change mitigation the best use of desert shrublands?

Treesearch

Susan E. Meyer

2011-01-01

In a world where the metrics of the carbon economy have become a major issue, it may come as a surprise that intact cold desert shrublands can sequester significant amounts of carbon, both as biomass and in the form of SOC (soil organic carbon). Xerophytic shrubs invest heavily in belowground biomass, placing fixed carbon in an environment where it turns over only very...

Fine-Scale Analysis Reveals Cryptic Landscape Genetic Structure in Desert Tortoises

PubMed Central

Latch, Emily K.; Boarman, William I.; Walde, Andrew; Fleischer, Robert C.

2011-01-01

Characterizing the effects of landscape features on genetic variation is essential for understanding how landscapes shape patterns of gene flow and spatial genetic structure of populations. Most landscape genetics studies have focused on patterns of gene flow at a regional scale. However, the genetic structure of populations at a local scale may be influenced by a unique suite of landscape variables that have little bearing on connectivity patterns observed at broader spatial scales. We investigated fine-scale spatial patterns of genetic variation and gene flow in relation to features of the landscape in desert tortoise (Gopherus agassizii), using 859 tortoises genotyped at 16 microsatellite loci with associated data on geographic location, sex, elevation, slope, and soil type, and spatial relationship to putative barriers (power lines, roads). We used spatially explicit and non-explicit Bayesian clustering algorithms to partition the sample into discrete clusters, and characterize the relationships between genetic distance and ecological variables to identify factors with the greatest influence on gene flow at a local scale. Desert tortoises exhibit weak genetic structure at a local scale, and we identified two subpopulations across the study area. Although genetic differentiation between the subpopulations was low, our landscape genetic analysis identified both natural (slope) and anthropogenic (roads) landscape variables that have significantly influenced gene flow within this local population. We show that desert tortoise movements at a local scale are influenced by features of the landscape, and that these features are different than those that influence gene flow at larger scales. Our findings are important for desert tortoise conservation and management, particularly in light of recent translocation efforts in the region. More generally, our results indicate that recent landscape changes can affect gene flow at a local scale and that their effects can be detected almost immediately. PMID:22132143

Fine-scale analysis reveals cryptic landscape genetic structure in desert tortoises.

PubMed

Latch, Emily K; Boarman, William I; Walde, Andrew; Fleischer, Robert C

2011-01-01

Characterizing the effects of landscape features on genetic variation is essential for understanding how landscapes shape patterns of gene flow and spatial genetic structure of populations. Most landscape genetics studies have focused on patterns of gene flow at a regional scale. However, the genetic structure of populations at a local scale may be influenced by a unique suite of landscape variables that have little bearing on connectivity patterns observed at broader spatial scales. We investigated fine-scale spatial patterns of genetic variation and gene flow in relation to features of the landscape in desert tortoise (Gopherus agassizii), using 859 tortoises genotyped at 16 microsatellite loci with associated data on geographic location, sex, elevation, slope, and soil type, and spatial relationship to putative barriers (power lines, roads). We used spatially explicit and non-explicit Bayesian clustering algorithms to partition the sample into discrete clusters, and characterize the relationships between genetic distance and ecological variables to identify factors with the greatest influence on gene flow at a local scale. Desert tortoises exhibit weak genetic structure at a local scale, and we identified two subpopulations across the study area. Although genetic differentiation between the subpopulations was low, our landscape genetic analysis identified both natural (slope) and anthropogenic (roads) landscape variables that have significantly influenced gene flow within this local population. We show that desert tortoise movements at a local scale are influenced by features of the landscape, and that these features are different than those that influence gene flow at larger scales. Our findings are important for desert tortoise conservation and management, particularly in light of recent translocation efforts in the region. More generally, our results indicate that recent landscape changes can affect gene flow at a local scale and that their effects can be detected almost immediately.

Highly specialized microbial diversity in hyper-arid polar desert

PubMed Central

Pointing, Stephen B.; Chan, Yuki; Lacap, Donnabella C.; Lau, Maggie C. Y.; Jurgens, Joel A.; Farrell, Roberta L.

2009-01-01

The McMurdo Dry Valleys in Antarctica are a cold hyperarid polar desert that present extreme challenges to life. Here, we report a culture-independent survey of multidomain microbial biodiversity in McKelvey Valley, a pristine example of the coldest desert on Earth. We demonstrate that life has adapted to form highly-specialized communities in distinct lithic niches occurring concomitantly within this terrain. Endoliths and chasmoliths in sandstone displayed greatest diversity, whereas soil was relatively depauperate and lacked a significant photoautotrophic component, apart from isolated islands of hypolithic cyanobacterial colonization on quartz rocks in soil contact. Communities supported previously unreported polar bacteria and fungi, but archaea were absent from all niches. Lithic community structure did not vary significantly on a landscape scale and stochastic moisture input due to snowmelt resulted in increases in colonization frequency without significantly affecting diversity. The findings show that biodiversity near the cold-arid limit for life is more complex than previously appreciated, but communities lack variability probably due to the high selective pressures of this extreme environment. PMID:19850879

Spatial heterogeneity of physicochemical properties explains differences in microbial composition in arid soils from Cuatro Cienegas, Mexico.

PubMed

Pajares, Silvia; Escalante, Ana E; Noguez, Ana M; García-Oliva, Felipe; Martínez-Piedragil, Celeste; Cram, Silke S; Eguiarte, Luis Enrique; Souza, Valeria

2016-01-01

Arid ecosystems are characterized by high spatial heterogeneity, and the variation among vegetation patches is a clear example. Soil biotic and abiotic factors associated with these patches have also been well documented as highly heterogeneous in space. Given the low vegetation cover and little precipitation in arid ecosystems, soil microorganisms are the main drivers of nutrient cycling. Nonetheless, little is known about the spatial distribution of microorganisms and the relationship that their diversity holds with nutrients and other physicochemical gradients in arid soils. In this study, we evaluated the spatial variability of soil microbial diversity and chemical parameters (nutrients and ion content) at local scale (meters) occurring in a gypsum-based desert soil, to gain knowledge on what soil abiotic factors control the distribution of microbes in arid ecosystems. We analyzed 32 soil samples within a 64 m(2) plot and: (a) characterized microbial diversity using T-RFLPs of the bacterial 16S rRNA gene, (b) determined soil chemical parameters, and (c) identified relationships between microbial diversity and chemical properties. Overall, we found a strong correlation between microbial composition heterogeneity and spatial variation of cations (Ca(2), K(+)) and anions (HCO[Formula: see text], Cl(-), SO[Formula: see text]) content in this small plot. Our results could be attributable to spatial differences of soil saline content, favoring the patchy emergence of salt and soil microbial communities.

Persisting effects of armored military maneuvers on some soils of the Mojave Desert

USGS Publications Warehouse

Prose, D.V.

1985-01-01

Soil compaction and substrate modification produced during large-scale armored military maneuvers in the early 1940s were examined in 1981 at seven sites in California's eastern Mojave Desert Recording penetrometer measurements show that tracks left by a single pass of an M3 "medium" tank have average soil resistance values that are 50% greater than those of the surrounding untracked soil in the upper 20 cm At one site, measurements made along short segments of track that have been visually eliminated by erosion and deposition processes show a 73% increase in penetrometer resistance over adjacent, undisturbed soils Dirt roadways at three former base camp locations could not be penetrated below 5-10 cm because of extreme compaction Soil bulk density was not as sensitive an indicator of soil compaction as was penetrometer resistance Density values in the upper 10 cm of soil are not significantly different between tank tracks and undisturbed soils at most sites, and roadways at two base camps show an average increase in bulk density of only 12% over adjacent soils. Trench excavations across tank tracks show that physical modifications of the substrate can extend vertically beneath a track to a depth of 25 cm and outward from a track's edge to 50 cm These soil disturbances are probably major factors that encourage accelerated soil erosion throughout the manuever area and also retard or prevent the return of vegetation to pre-disturbance conditions ?? 1985 Springer-Verlag New York Inc.

A new investigation on the water isotopes in the Badain Jaran Desert, China, for inferring water origination

NASA Astrophysics Data System (ADS)

Wu, X.; Wang, Y.; Wang, X. S.; Hu, B.

2017-12-01

Stable isotope δ2H, δ18O and d-excess values of water have previously been used to study the hydraulic connection of groundwater between the surrounding areas such as Heihe River Basin, Qilian Mountain and the Badain Jaran desert (BJD), China. We choose to focus on the effects of strong evaporation on the isotopic characteristics of water in the desert to better understand the origin of water in the BJD. A series of evaporation experiments were conducted in the desert to examine how it may change during evaporation and infiltration under local environmental conditions. Evaporation from open water was monitored in two experiments using local groundwater and lake water, respectively. And evaporation of soil water was observed in three pits which were excavated to different depths below a flat ground surface to install the evaporation-infiltration systems. Water samples were also collected from lakes, a spring and local unconfined aquifer for analyses of stable hydrogen and oxygen isotope ratios, and d-excess values in the BJD. The results show that water isotope contents became progressively enriched along an evaporation line, and the d-excess values decreased with the evaporation. The strong relationship of d-excess and δ18O values was observed from both the experiments and the water samples of groundwater and lakes, which is considered to be a signature of strong evaporation. Also, all the values of groundwater and lake water samples fall along with the evaporation line established through the evaporation experiments, indicating that lakes and groundwater in the study area have evolved from meteoric precipitation under modern or similar to modern climatic conditions. Analysis of a few previously published d-excess and δ18O values of groundwater from the BJD, Lake Eyre Basin, Australia, and Jabal Hafit mountain, United Arab Emirates reveals strong relationships between the two, suggesting similar recharge processes as observed in the BJD. This study demonstrated that the characteristic water isotopic patterns resulting from evaporation could be utilized to help resolve ambiguities in the interpretation of water isotope data in terms of recharge sources, especially, in the arid regions, such as the central Australia and the deserts of United Arab Emirates.

Analysis of land cover change and its driving forces in a desert oasis landscape of southern Xinjiang, China

NASA Astrophysics Data System (ADS)

Amuti, T.; Luo, G.

2014-07-01

The combined effects of drought, warming and the changes in land cover have caused severe land degradation for several decades in the extremely arid desert oases of Southern Xinjiang, Northwest China. This study examined land cover changes during 1990-2008 to characterize and quantify the transformations in the typical oasis of Hotan. Land cover classifications of these images were performed based on the supervised classification scheme integrated with conventional vegetation and soil indexes. Change-detection techniques in remote sensing (RS) and a geographic information system (GIS) were applied to quantify temporal and spatial dynamics of land cover changes. The overall accuracies, Kappa coefficients, and average annual increase rate or decrease rate of land cover classes were calculated to assess classification results and changing rate of land cover. The analysis revealed that major trends of the land cover changes were the notable growth of the oasis and the reduction of the desert-oasis ecotone, which led to accelerated soil salinization and plant deterioration within the oasis. These changes were mainly attributed to the intensified human activities. The results indicated that the newly created agricultural land along the margins of the Hotan oasis could result in more potential areas of land degradation. If no effective measures are taken against the deterioration of the oasis environment, soil erosion caused by land cover change may proceed. The trend of desert moving further inward and the shrinking of the ecotone may lead to potential risks to the eco-environment of the Hotan oasis over the next decades.

Effects of land use change on soil carbon storage and water consumption in an oasis-desert ecotone.

PubMed

Lü, Yihe; Ma, Zhimin; Zhao, Zhijiang; Sun, Feixiang; Fu, Bojie

2014-06-01

Land use and ecosystem services need to be assessed simultaneously to better understand the relevant factors in sustainable land management. This paper analyzed land use changes in the middle reach of the arid Heihe River Basin in northwest China over the last two decades and their impacts on water resources and soil organic carbon (SOC) storage. The results indicated that from 1986 to 2007: (1) cropland and human settlements expanded by 45.0 and 17.6%, respectively, at the expense of 70.1, 35.7, and 4.1% shrinkage on woodland, grassland, and semi-shrubby desert; (2) irrigation water use was dominant and increased (with fluctuations) at an average rate of 8.2%, while basic human water consumption increased monotonically over a longer period from 1981 to 2011 at a rate of 58%; and (3) cropland expansion or continuous cultivation led to a significant reduction of SOC, while the land use transition from grassland to semi-shrubby desert and the progressive succession of natural ecosystems such as semi-shrubby desert and grassland, in contrast, can bring about significant carbon sequestration benefits. The increased water consumption and decreased SOC pool associated with some observed land use changes may induce and aggravate potential ecological risks for both local and downstream ecosystems, including water resource shortages, soil quality declines, and degeneration of natural vegetation. Therefore, it is necessary to balance socioeconomic wellbeing and ecosystem services in land use planning and management for the sustainability of socio-ecological systems across spatiotemporal scales, especially in resource-poor arid environments.

Bacillus swezeyi sp. nov. and Bacillus haynesii sp. nov., isolated from desert soil

USDA-ARS?s Scientific Manuscript database

Two isolates of Gram-positive, facultatively anaerobic, motile, rod-shaped, endospore-forming bacteria were identified during a survey of the diversity of Bacillus strains deposited in the Agriculture Research Service Culture Collection. These strains were originally isolated from soil in Evolution ...

Soil compaction vulnerability at Organ Pipe Cactus National Monument, Arizona

USGS Publications Warehouse

Webb, Robert H.; Nussear, Kenneth E.; Carmichael, Shinji; Esque, Todd C.

2014-01-01

Compaction vulnerability of different types of soils by hikers and vehicles is poorly known, particularly for soils of arid and semiarid regions. Engineering analyses have long shown that poorly sorted soils (for example, sandy loams) compact to high densities, whereas well-sorted soils (for example, eolian sand) do not compact, and high gravel content may reduce compaction. Organ Pipe Cactus National Monument (ORPI) in southwestern Arizona, is affected greatly by illicit activities associated with the United States–Mexico border, and has many soils that resource managers consider to be highly vulnerable to compaction. Using geospatial soils data for ORPI, compaction vulnerability was estimated qualitatively based on the amount of gravel and the degree of sorting of sand and finer particles. To test this qualitative assessment, soil samples were collected from 48 sites across all soil map units, and undisturbed bulk densities were measured. A scoring system was used to create a vulnerability index for soils on the basis of particle-size sorting, soil properties derived from Proctor compaction analyses, and the field undisturbed bulk densities. The results of the laboratory analyses indicated that the qualitative assessments of soil compaction vulnerability underestimated the area of high vulnerability soils by 73 percent. The results showed that compaction vulnerability of desert soils, such as those at ORPI, can be quantified using laboratory tests and evaluated using geographic information system analyses, providing a management tool that managers potentially could use to inform decisions about activities that reduce this type of soil disruption in protected areas.

Are There High Meteorite Concentrations in the Atacama Desert/Chile?

NASA Astrophysics Data System (ADS)

Scherer, P.; Delisle, G.

1992-07-01

We have visited numerous regions of the Atacama desert between Copiapo (27 degrees, 15'S) and Calama (22 degrees, 25'S) to assess their potential as a high-yield meteorite concentration surface, easily exploitable by search efforts within a reasonable time frame. According to our observations, this desert is characterized by the following features: a) A high percentage of the desert consists of sloping surfaces on which soil movement occurs, presumably by very infrequent, though heavy rain. b) Vast areas of the desert are covered by a dm-thick sand layer of dark colour. Since the sand is too coarse-grained to be transported by wind it presumably resulted from in-situ weathering of rock debris derived from nearby mountains. We suspect that impacting smaller objects can easily penetrate the sand layer. c) The sand layer is typically dotted by rocks, fist-size or smaller, that are covered by a thick layer of desert paint (reddish-brown to black colour). Most country rocks are of volcanic origin (rhyolite, andesite, basalt) and are typically of grey to black colour. A noticeable colour contrast in particular to potential stony meteorites is almost nonexistent. d) Soil salts with a potential to speed up weathering processes are ubiquitous near the surface. e) The Pampa de Mejillones, 45 km north of Antofagasta, is one of the few light-coloured areas in the Atacama desert. The surface, being of Mio-Pliocene age, consists of an almost continuous layer of light-brown fossil shells (bivalves and gastropodes). Fluvially transported dark rocks from adjacent outcrops rest on top. The latter material is covered again by desert paint. Few meteorite discoveries have been reported from this area (Pampa (a),(b),(c)). f) Numerous old tire tracks, in particular around mines in operation, crisscross most areas of the Atacama. Undetected objects such as large masses of iron bodies are not likely to have remained undiscovered in great numbers any more. We conclude that the potential of the Atacama desert for a successful meteorite search is rather low in comparison to other deserts such as the Nullarbor Plain, Australia (Bevan and Binns, 1989), or the Acfer region, Algeria (Otto, 1992). We will demonstrate the vastly different surface conditions of areas with meteorite concentrations from these three localities. References: Bevan A.W.R. and Binns R.A. (1989) Meteoritics 24, 127. Otto J. (1992) Chem. Erde 52, 33.

Spatiotemporal dynamics of wetted soils across a polar desert landscape

DOE PAGES

Langford, Zachary L.; Gooseff, Michael N.; Lampkin, Derrick J.

2014-10-30

Liquid water is scarce across the landscape of the McMurdo Dry Valleys (MDV), Antarctica, a 3800 km 2 ice-free region, and is chiefly associated with soils that are adjacent to streams and lakes (i.e. wetted margins) during the annual thaw season. However, isolated wetted soils have been observed at locations distal from water bodies. The source of water for the isolated patches of wet soil is potentially generated by a combination of infiltration from melting snowpacks, melting of pore ice at the ice table, and melting of buried segregation ice formed during winter freezing. In this paper, high resolution remotemore » sensing data gathered several times per summer in the MDV region were used to determine the spatial and temporal distribution of wet soils. The spatial consistency with which the wet soils occurred was assessed for the 2009–10 to 2011–12 summers. The remote sensing analyses reveal that cumulative area and number of wet soil patches varies among summers. The 2010–11 summer provided the most wetted soil area (10.21 km 2) and 2009–10 covered the least (5.38 km 2). Finally, these data suggest that wet soils are a significant component of the MDV cold desert land system and may become more prevalent as regional climate changes.« less

Aerosolization of cyanobacterial cells across ecosystem boundaries in the McMurdo Dry Valleys, Antarctica

NASA Astrophysics Data System (ADS)

Trout-Haney, J.; Heindel, R. C.; Virginia, R. A.

2017-12-01

Cyanobacteria play a major ecological role in polar freshwaters, occurring predominately as small single cells in the water column, i.e., picocyanobacteria, or large multicellular colonies and mats that reside on the lake bottom. Cyanobacteria are also present in terrestrial polar habitats, including within soils, soil crusts, rocks, and glacial ice. Despite their predominance in polar ecosystems, the extent to which cyanobacteria move between terrestrial and aquatic landscape units remains poorly understood. In polar deserts such as the McMurdo Dry Valleys, aeolian processes influence terrestrial landscape morphology and drive the transport of sediments and other particles. Water surfaces can also act as a source of aerosolized particles, such as the production of sea spray aerosols through wave breaking in marine environments. However, aerosolization from freshwater bodies has been far less studied, especially in polar regions. We conducted a field-study to examine the transport of aerosolized cyanobacterial cells from ponds and soils in the McMurdo Dry Valleys. We used highly portable aerosol collection devices fitted with GF/F filters combusted at 500°C (0.3 µm) to collect small particles, such as picocyanobacteria (0.2 - 2 µm), from near-shore water and adjacent soil. We used epifluorescence microscopy to quantify aerosolized cells, with excitation filters for chlorophyll a (435 nm) and phycobilin pigments (572 nm), to distinguish cyanobacterial cells. We detected aerosolized picocyanobacterial cells from all ponds and soils sampled, indicating that these cells may be quite mobile and transported across ecosystem boundaries. We observed cyanobacterial cells individually, clustered, and associated with other organic material, suggesting multiple modes of cell transport. Further, we investigated the potential for aerosolization of toxin-producing cyanobacterial taxa (or unbound cyanotoxins), and the ecological and ecosystem-scale implications of aerosolization on cyanobacterial transport, cyanotoxin exposure, and nutrient cycling. Our results highlight the role of aerosolization in transporting cyanobacterial cells and suggest that even in extreme polar deserts, biological connectivity exists between aquatic and terrestrial habitats.

Impacts of water and nitrogen addition on nitrogen recovery in Haloxylon ammodendron dominated desert ecosystems.

PubMed

Cui, Xiaoqing; Yue, Ping; Gong, Yanming; Li, Kaihui; Tan, Dunyan; Goulding, Keith; Liu, Xuejun

2017-12-01

Desert ecosystems are likely to change in response to global climate change and nitrogen (N) deposition. The effects of increased precipitation and N deposition on plant growth and the N cycle largely depend on N allocation and N recovery efficiency in the plant-soil ecosystem, but there is limited research on this in desert ecosystems. Here we report results using double-labeled 15 NH 4 15 NO 3 (30 and 60kgNha -1 yr -1 ) as a tracer under ambient (no additional water addition) and enhanced precipitation (60mm water addition) in a Haloxylon ammodendron dominated ecosystem in the Gurbantunggut Desert of Northwest China. Herbaceous plants were a significantly larger sink for added 15 N than the H. ammodendron trees, and N retention varied with water and N addition, relative to growing season precipitation. The retention of added 15 N varied within the components of H. ammodendron, with the stems retaining most, followed by the assimilation branches. Soil was the dominant sink for added 15 N, in which the topsoil and subsoil respond differently to water and N addition over the two-year period. Nitrogen relative recovery percentage in the whole ecosystem ranged from 43% to 61%, lower than average recovery rate in temperate forests; N tracer recovery percentage significantly increased with water addition but decreased with enhanced N deposition. Future N cycling in central Asian deserts will depend on changes in precipitation. Copyright © 2017 Elsevier B.V. All rights reserved.

Desert disturbance assessments of regional oil exploitation by Aster and ETM+ images in Taklimakan Desert China.

PubMed

Ouyang, Wei; Hao, Fang-Hua; Fu, Yongshuo; Zhang, Jiaxun

2008-09-01

To feed its rapidly growing energy demand, oil exploitation in China has never been more intensive. The most obvious characteristics of oil exploitation are progressive and regional, which can be monitored by remote sensing, such as land use and cover change, either perpetual or temporary, during oil field development such as construction of oil well, roads, transportation systems and other facilities. In this paper, the oil field located on the north edge of Taklimakan Desert, in the Tarim River watershed in northwest of China. The disturbance effects of regional oil exploitation were the main content of regional environmental managements and monitoring. Based on Enhanced Thematic Mapper Plus (ETM+) and Aster images, analyzed regional land use and landscape change from 2001 to 2003. By the comparison, it can be concluded that the ecological quality was deteriorating in these 3 years. The woodland was degrading to grass and desert. The area of woodland dropped from 9.06 km(2) in 2001 to 3.24 km(2) in 2003 with a 64.23% decrease. At the same time, the area of shrubbery lessened 18.23%. On the other hand, the whole area of desert and Saline soils inflated from 15.08 km(2) in 2001 to 25.36 km(2) in 2003. The patch number of bare land did climb dramatically, but single patch area increased. The research demonstrated that desert and Saline soils patches were activated by the human behavior and climate change. The information from the ETM+ and Aster images was proved be an effective and efficient way to be applied in regional environmental managements.

Simulation of semi-arid biomass plantations and irrigation using the WRF-NOAH model - a comparison with observations from Israel

NASA Astrophysics Data System (ADS)

Branch, O.; Warrach-Sagi, K.; Wulfmeyer, V.; Cohen, S.

2014-05-01

A 10 × 10 km irrigated biomass plantation was simulated in an arid region of Israel to simulate diurnal energy balances during the summer of 2012 (JJA). The goal is to examine daytime horizontal flux gradients between plantation and desert. Simulations were carried out within the coupled WRF-NOAH atmosphere/land surface model. MODIS land surface data was adjusted by prescribing tailored land surface and soil/plant parameters, and by adding a controllable sub-surface irrigation scheme to NOAH. Two model cases studies were compared - Impact and Control. Impact simulates the irrigated plantation. Control simulates the existing land surface, where the predominant land surface is bare desert soil. Central to the study is parameter validation against land surface observations from a desert site and from a 400 ha Simmondsia chinensis (jojoba) plantation. Control was validated with desert observations, and Impact with Jojoba observations. Model evapotranspiration was validated with two Penman-Monteith estimates based on the observations. Control simulates daytime desert conditions with a maximum deviation for surface 2 m air temperatures (T2) of 0.2 °C, vapour pressure deficit (VPD) of 0.25 hPa, wind speed (U) of 0.5 m s-1, surface radiation (Rn) of 25 W m-2, soil heat flux (G) of 30 W m-2 and 5 cm soil temperatures (ST5) of 1.5 °C. Impact simulates irrigated vegetation conditions with a maximum deviation for T2 of 1-1.5 °C, VPD of 0.5 hPa, U of 0.5 m s-1, Rn of 50 W m-5, G of 40 W m-2 and ST5 of 2 °C. Latent heat curves in Impact correspond closely with Penman-Monteith estimates, and magnitudes of 160 W m-2 over the plantation are usual. Sensible heat fluxes, are around 450 W m-2 and are at least 100-110 W m-2 higher than the surrounding desert. This surplus is driven by reduced albedo and high surface resistance, and demonstrates that high evaporation rates may not occur over Jojoba if irrigation is optimized. Furthermore, increased daytime T2 over plantations highlight the need for hourly as well as daily mean statistics. Daily mean statistics alone may imply an overall cooling effect due to surplus nocturnal cooling, when in fact a daytime warming effect is observed.

Optimization of the Use of His₆-OPH-Based Enzymatic Biocatalysts for the Destruction of Chlorpyrifos in Soil.

PubMed

Senko, Olga; Maslova, Olga; Efremenko, Elena

2017-11-23

Applying enzymatic biocatalysts based on hexahistidine-containing organophosphorus hydrolase (His₆-OPH) is suggested for the decomposition of chlorpyrifos, which is actively used in agriculture in many countries. The application conditions were optimized and the following techniques was suggested to ensure the highest efficiency of the enzyme: first, the soil is alkalinized with hydrated calcitic lime Ca(OH)₂, then the enzyme is introduced into the soil at a concentration of 1000 U/kg soil. Non-equilibrium low temperature plasma (NELTP)-modified zeolite is used for immobilization of the relatively inexpensive polyelectrolyte complexes containing the enzyme His₆-OPH and a polyanionic polymer: poly-l-glutamic acid (PLE 50 ) or poly-l-aspartic acid (PLD 50 ). The soil's humidity is then increased up to 60-80%, the top layer (10-30 cm) of soil is thoroughly stirred, and then exposed for 48-72 h. The suggested approach ensures 100% destruction of the pesticide within 72 h in soils containing as much as 100 mg/kg of chlorpyrifos. It was concluded that using this type of His₆-OPH-based enzyme chemical can be the best approach for soils with relatively low humus concentrations, such as sandy and loam-sandy chestnut soils, as well as types of soil with increased alkalinity (pH 8.0-8.4). Such soils are often encountered in desert, desert-steppe, foothills, and subtropical regions where chlorpyrifos is actively used.

Soil developments in polar deserts: Implications for exobiology and future Mars missions

NASA Technical Reports Server (NTRS)

Gibson, Everett K., Jr.

1989-01-01

Chemical alterations, weathering, and diagenesis of soil profiles from the dry valleys of Antarctica were studied as analogs of regolith development for the Martian regolith. Chemical weathering processes play an important part in soil development within the dry valleys of Antarctica. A suite of core samples were studied which were taken within the valley floors in addition to samples taken in the vicinity of evaporite and brine ponds. Analysis of water soluable cations and anions from core samples were performed along with petrographic analysis of selected samples. It was shown that ionic transport processes operate primarily above the permafrost zone. Abundances of the water soluable ions reflect the nature of secondary minerals produced by evaporation and weathering. Chloride, calcium, and sodium abundances for soils from the cores within the North and South Forks of Wright Valley, reflect the secondary mineralogy of the soil columns. Calculations for Na, Ca, and Cl abundances reflect the appearance of halite and antarcticite. In areas where excess Ca is present, X-ray diffraction studies show the presence of gypsum. It is well known that the Martian surface conditions may be favorable for chemical weathering. Primary silicates would be expected to be reactive with any ground water. It seems likely that Martian subsurface water is available to assist in the weathering of the primary minerals. Such weathering could result in the formation of clays, sulfates, carbonates, hydrates, halides, and zeolites. The dry valley cores have shown that they maybe excellent analogs to weathering processes on the near-surface of Mars. Since movement of water within the near-surface region clearly results in chemical weathering, leaching, and salt formation in the dry valleys, similar processes are probably operating within the Martian regolith.

Erosion Resistance Index (ERI) to Assess Surface Stability in Desert Environments

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hamada, Yuki; Grippo, Mark A.

2015-11-01

A new spectral index—erosion resistance index (ERI)—was developed to assess erosion risks in desert landscapes. The index was developed by applying trigonometry to the combination of the green/red band-ratio and the red/near infrared band-ratio from very high spatial resolution imagery. The resultant ERI maps showed spatially cohesive distributions of high and low index values across the study areas. High index values were observed over areas that were resistant to erosion (such as desert pavement and dense vegetation), while low index values overlapped with areas likely dominated by loose sandy soils, such as stream beds and access roads. Although further investigationmore » is warranted, this new index, ERI, shows promise for the assessment of erosion risks in desert regions.« less

Anthropogenic degradation of the southern California desert ecosystem and prospects for natural recovery and restoration

USGS Publications Warehouse

Lovich, J.E.; Bainbridge, D.

1999-01-01

Large areas of the southern California desert ecosystem have been negatively affected by off-highway vehicle use, overgrazing by domestic livestock, agriculture, urbanization, construction of roads and utility corridors, air pollution, military training exercises, and other activities. Secondary contributions to degradation include the proliferation of exotic plant species and a higher frequency of an- thropogenic fire. Effects of these impacts include alteration or destruction of macro- and micro- vegetation elements, establishment of annual plant communities dominated by exotic species, destruction of soil stabilizers, soil compaction, and increased erosion. Published estimates of recovery time are based on return to predisturbance levels of biomass, cover, density, community structure, or soil characteristics. Natural recovery rates depend on the nature and severity of the impact but are generally very slow. Recovery to predisturbance plant cover and biomass may take 50-300 years, while complete ecosystem recovery may require over 3000 years. Restorative intervention can be used to enhance the success and rate of recovery, but the costs are high and the probability for long-term success is low to moderate. Given the sensitivity of desert habitats to disturbance and the slow rate of natural recovery, the best management option is to limit the extent and intensity of impacts as much as possible.

Biomass and nutrient allocation strategies in a desert ecosystem in the Hexi Corridor, northwest China.

PubMed

Zhang, Ke; Su, YongZhong; Yang, Rong

2017-07-01

The allocation of biomass and nutrients in plants is a crucial factor in understanding the process of plant structures and dynamics to different environmental conditions. In this study, we present a comprehensive scaling analysis of data from a desert ecosystem to determine biomass and nutrient (carbon (C), nitrogen (N), and phosphorus (P)) allocation strategies of desert plants from 40 sites in the Hexi Corridor. We found that the biomass and levels of C, N, and P storage were higher in shoots than in roots. Roots biomass and nutrient storage were concentrated at a soil depth of 0-30 cm. Scaling relationships of biomass, C storage, and P storage between shoots and roots were isometric, but that of N storage was allometric. Results of a redundancy analysis (RDA) showed that soil nutrient densities were the primary factors influencing biomass and nutrient allocation, accounting for 94.5% of the explained proportion. However, mean annual precipitation was the primary factor influencing the roots biomass/shoots biomass (R/S) ratio. Furthermore, Pearson's correlations and regression analyses demonstrated that although the biomass and nutrients that associated with functional traits primarily depended on soil conditions, mean annual precipitation and mean annual temperature had greater effects on roots biomass and nutrient storage.

Surface biosolids application: effects on infiltration, erosion, and soil organic carbon in Chihuahuan Desert grasslands and shrublands.

PubMed

Moffet, C A; Zartman, R E; Wester, D B; Sosebee, R E

2005-01-01

Land application of biosolids is a beneficial-use practice whose ecological effects depend in part on hydrological effects. Biosolids were surface-applied to square 0.5-m2 plots at four rates (0, 7, 34, and 90 dry Mg ha(-1)) on each of three soil-cover combinations in Chihuahuan Desert grassland and shrubland. Infiltration and erosion were measured during two seasons for three biosolids post-application ages. Infiltration was measured during eight periods of a 30-min simulated rain. Biosolids application affected infiltration rate, cumulative infiltration, and erosion. Infiltration increased with increasing biosolids application rate. Application of biosolids at 90 dry Mg ha(-1) increased steady-state infiltration rate by 1.9 to 7.9 cm h(-1). Most of the measured differences in runoff among biosolids application rates were too large to be the result of interception losses and/or increased hydraulic gradient due to increased roughness. Soil erosion was reduced by the application of biosolids; however, the extent of reduction in erosion depended on the initial erodibility of the site. Typically, the greatest marginal reductions in erosion were achieved at the lower biosolids application rates (7 and 34 dry Mg ha(-1)); the difference in erosion between 34 and 90 dry Mg ha(-1) biosolids application rates was not significant. Surface application of biosolids has important hydrological consequences on runoff and soil erosion in desert grasslands that depend on the rate of biosolids applied, and the site and biosolids characteristics.

Thermoregulatory value of cracking-clay soil shelters for small vertebrates during extreme desert conditions.

PubMed

Waudby, Helen P; Petit, Sophie

2017-05-01

Deserts exhibit extreme climatic conditions. Small desert-dwelling vertebrates have physiological and behavioral adaptations to cope with these conditions, including the ability to seek shelter. We investigated the temperature (T) and relative humidity (RH) regulating properties of the soil cracks that characterize the extensive cracking-clay landscapes of arid Australia, and the extent of their use by 2 small marsupial species: fat-tailed and stripe-faced dunnarts (Sminthopsis crassicaudata and Sminthopsis macroura). We measured hourly (over 24-h periods) the T and RH of randomly-selected soil cracks compared to outside conditions, during 2 summers and 2 winters. We tracked 17 dunnarts (8 Sminthopsis crassicaudata and 9 Sminthopsis macroura) to quantify their use of cracks. Cracks consistently moderated microclimate, providing more stable conditions than available from non-crack points, which often displayed comparatively dramatic fluctuations in T and RH. Both dunnart species used crack shelters extensively. Cracks constitute important shelter for small animals during extreme conditions by providing a stable microclimate, which is typically cooler than outside conditions in summer and warmer in winter. Cracks likely play a fundamental sheltering role by sustaining the physiological needs of small mammal populations. Globally, cracking-clay areas are dominated by agricultural land uses, including livestock grazing. Management of these systems should focus not only on vegetation condition, but also on soil integrity, to maintain shelter resources for ground-dwelling fauna. © 2016 International Society of Zoological Sciences, Institute of Zoology/Chinese Academy of Sciences and John Wiley & Sons Australia, Ltd.

Changes in Temperature Sensitivity and Activation Energy of Soil Organic Matter Decomposition in Different Qinghai-Tibet Plateau Grasslands

PubMed Central

Li, Jie; He, Nianpeng; Wei, Xuehong; Gao, Yang; Zuo, Yao

2015-01-01

Qinghai-Tibet Plateau grasslands are unique geographical regions and store substantial soil organic matter (SOM) in the soil surface, which make them very sensitive to global climate change. Here, we focused on three main grassland types (alpine meadow, steppe, and desert) and conducted a soil incubation experiment at five different temperatures (5, 10, 15, 20, and 25°C) to investigate SOM decomposition rates (R), temperature sensitivity (Q 10), and activation energy (E a). The results showed that grassland type and incubation temperature had significant impact on R (P < 0.001), and the values of R were exponential correlated with incubation temperature in three alpine grasslands. At the same temperature, R was in the following order: alpine meadow > alpinesteppe > alpine desert. The Q 10 values differed significantly among different grasslands, and the overall trends were as follows: alpine meadow (1.56 ± 0.09) < alpine steppe (1.88 ± 0.23) < alpine desert (2.39 ± 0.32). Moreover, the E a values differed significantly across different grassland types (P < 0.001) and increased with increasing incubation time. The exponential negative correlations between E a and R at 20°C across all grassland types (all Ps < 0.001) indicated that the substrate-quality temperature hypothesis is applicable to the alpine grasslands. Our findings provide new insights for understanding the responses of SOM decomposition and storage to warming scenarios in this Plateau. PMID:26176705

Characteristics and origin of rock varnish from the hyperarid coastal deserts of northern Peru

NASA Astrophysics Data System (ADS)

Jones, Charles E.

1991-01-01

The characteristics of a new type of rock varnish from the hyperarid coastal deserts of northern Peru, combined with laboratory experiments on associated soil materials, provide new insights into the formation of rock varnish. The Peruvian varnish consists of an Fe-rich, Mn-poor component covering up to 95% of a varnished surface and a Fe-rich, Mn-rich component found only in pits and along cracks and ridges. The alkaline soils plus the catalytic Fe oxyhydroxides that coat much of the varnish surfaces make the Peruvian situation ideal for physicochemical precipitation of Mn. However, the low Mn content of the dominant Fe-rich, Mn-poor component suggests that such precipitation is minor. This, plus the presence of abundant bacteria in the Mn-rich varnish and the recorded presence of Mn-precipitating bacteria in varnish elsewhere, suggests that bacteria are almost solely responsible for Mn-precipitation in rock varnish. A set of experiments involving Peruvian soil samples in contact with water-CO 2 solutions indicates that natural fogs or dews release Mn but not Fe when they come in contact with eolian materials on rock surfaces. This mechanism may efficiently provide Mn to bacteria on varnishing surfaces. The lack of Fe in solution suggests that a large but unknown proportion of Fe in varnish may be in the form of insoluble Fe oxyhydroxides sorbed onto the clay minerals that form the bulk of rock varnish. The results of this study do not substantively change R. I. Dorn's paleoenvironmental interpretations of varnish Mn:Fe ratios, but they do suggest areas for further inquiry.

A Procedure for Evaluation of Dust Potential in Desert Terrains,

DTIC Science & Technology

1985-01-01

Surficial Deposits, Silt, Clay, Sand. ABSTRACT ^•The evaluation of dust potential in hot deserts is based on the association of well de - fined dust...late Quaternary, which la heat understood, the efectiveaeas of climatic changes and the identification of euch •«ctuatioa in soils may he only roughly...ridges - ballenas . Nahal Roded, southern Arava Valley. „ ’ *m V J c^> ^ Mmmmmmmmmmmmmmmmw iu .......... . ^ ^^ - - _^^_^_m_ mm, PLATE S

The effect of consumer pressure and abiotic stress on positive plant interactions are mediated by extreme climatic events.

PubMed

Filazzola, Alessandro; Liczner, Amanda Rae; Westphal, Michael; Lortie, Christopher J

2018-01-01

Environmental extremes resulting from a changing climate can have profound implications for plant interactions in desert communities. Positive interactions can buffer plant communities from abiotic stress and consumer pressure caused by climatic extremes, but limited research has explored this empirically. We tested the hypothesis that the mechanism of shrub facilitation on an annual plant community can change with precipitation extremes in deserts. During years of extreme drought and above-average rainfall in a desert, we measured plant interactions and biomass while manipulating a soil moisture gradient and reducing consumer pressure. Shrubs facilitated the annual plant community at all levels of soil moisture through reductions in microclimatic stress in both years and herbivore protection in the wet year only. Shrub facilitation and the high rainfall year contributed to the dominance of a competitive annual species in the plant community. Precipitation patterns in deserts determine the magnitude and type of facilitation mechanisms. Moreover, shrub facilitation mediates the interspecific competition within the associated annual community between years with different rainfall amounts. Examining multiple drivers during extreme climate events is a challenging area of research, but it is a necessary consideration given forecasts predicting that these events will increase in frequency and magnitude. © 2017 The Authors. New Phytologist © 2017 New Phytologist Trust.

Thin scale ecohydrological data and relations at semi-arid regions: a methodological approach

USDA-ARS?s Scientific Manuscript database

In semi-arid regions worldwide the vegetation is organized in patches surrounded by bare soil with marked differences in their soil properties that play important roles in runoff and infiltration. Chihuahuan-Sonoran and Patagonian Monte deserts regions show floristic similarity greater than that ex...

Controls on vegetation – soil moisture coupling in arid shrublands during drought elicited through long-term data

USDA-ARS?s Scientific Manuscript database

Our goal was to quantify variation in ecological responses to sustained period of moisture limitation (ecological drought) across a semiarid ecological landscape in northern Chihuahuan Desert, USA. We obtained long-term meteorological, ecological site, soil moisture and aboveground net primary prod...

Carbon sequestration in response to grassland–shrubland–turfgrass conversions and a test for carbonate biomineralization in desert soils, New Mexico, USA

USDA-ARS?s Scientific Manuscript database

This study uses an experimental pedology approach to examine (i) how the conversion of native C4 grassland to C3 woody shrubs then to irrigated C4 turfgrass affects both soil organic C (SOC) and soil inorganic C (SIC) and (ii) whether SIC can be enhanced by microbial biomineralization. Three sites w...