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Sample records for desy wissenschaftlicher jahresbericht

  1. Book Review: Wissenschaftliches Publizieren erlernen

    NASA Astrophysics Data System (ADS)

    Wiedemair, Christof; Sterken, Christiaan

    2012-10-01

    Book Review: Wissenschaftliches Publizieren erlernen: Wissenschaft ist wie Haute Cuisine - man muss seine Ergebnisse dem Leser stilvoll servieren. Science is like Haute Cuisine - results should be served in style to the reader. Review of "Scientific Writing for Young Astronomers", see 2011EAS....50.....S

  2. Centrally managed tapes at DESY

    SciTech Connect

    Hell, O.

    1994-12-31

    Tapes at DESY are managed by the computer center and thus offer virtually unlimited storage space to the DESY computer center users. This paper describes the most recent version of the DESY tape management system, its predecessors having been in service for many years.

  3. Detector developments at DESY.

    PubMed

    Wunderer, Cornelia B; Allahgholi, Aschkan; Bayer, Matthias; Bianco, Laura; Correa, Jonathan; Delfs, Annette; Göttlicher, Peter; Hirsemann, Helmut; Jack, Stefanie; Klyuev, Alexander; Lange, Sabine; Marras, Alessandro; Niemann, Magdalena; Pithan, Florian; Reza, Salim; Sheviakov, Igor; Smoljanin, Sergej; Tennert, Maximilian; Trunk, Ulrich; Xia, Qingqing; Zhang, Jiaguo; Zimmer, Manfred; Das, Dipayan; Guerrini, Nicola; Marsh, Ben; Sedgwick, Iain; Turchetta, Renato; Cautero, Giuseppe; Giuressi, Dario; Menk, Ralf; Khromova, Anastasiya; Pinaroli, Giovanni; Stebel, Luigi; Marchal, Julien; Pedersen, Ulrik; Rees, Nick; Steadman, Paul; Sussmuth, Mark; Tartoni, Nicola; Yousef, Hazem; Hyun, HyoJung; Kim, KyungSook; Rah, Seungyu; Dinapoli, Roberto; Greiffenberg, Dominic; Mezza, Davide; Mozzanica, Aldo; Schmitt, Bernd; Shi, Xintian; Krueger, Hans; Klanner, Robert; Schwandt, Joem; Graafsma, Heinz

    2016-01-01

    With the increased brilliance of state-of-the-art synchrotron radiation sources and the advent of free-electron lasers (FELs) enabling revolutionary science with EUV to X-ray photons comes an urgent need for suitable photon imaging detectors. Requirements include high frame rates, very large dynamic range, single-photon sensitivity with low probability of false positives and (multi)-megapixels. At DESY, one ongoing development project - in collaboration with RAL/STFC, Elettra Sincrotrone Trieste, Diamond, and Pohang Accelerator Laboratory - is the CMOS-based soft X-ray imager PERCIVAL. PERCIVAL is a monolithic active-pixel sensor back-thinned to access its primary energy range of 250 eV to 1 keV with target efficiencies above 90%. According to preliminary specifications, the roughly 10 cm × 10 cm, 3.5k × 3.7k monolithic sensor will operate at frame rates up to 120 Hz (commensurate with most FELs) and use multiple gains within 27 µm pixels to measure 1 to ∼100000 (500 eV) simultaneously arriving photons. DESY is also leading the development of the AGIPD, a high-speed detector based on hybrid pixel technology intended for use at the European XFEL. This system is being developed in collaboration with PSI, University of Hamburg, and University of Bonn. The AGIPD allows single-pulse imaging at 4.5 MHz frame rate into a 352-frame buffer, with a dynamic range allowing single-photon detection and detection of more than 10000 photons at 12.4 keV in the same image. Modules of 65k pixels each are configured to make up (multi)megapixel cameras. This review describes the AGIPD and the PERCIVAL concepts and systems, including some recent results and a summary of their current status. It also gives a short overview over other FEL-relevant developments where the Photon Science Detector Group at DESY is involved.

  4. The DESI instrument control system

    NASA Astrophysics Data System (ADS)

    Honscheid, K.; Elliott, A. E.; Beaufore, L.; Buckley-Geer, E.; Castander, F.; daCosta, L.; Fausti, A.; Kent, S.; Kirkby, D.; Neilsen, E.; Reil, K.; Serrano, S.; Slozar, A.

    2016-08-01

    The Dark Energy Spectroscopic Instrument (DESI) , a new instrument currently under construction for the Mayall 4m telescope at Kitt Peak National Observatory, will consist of a wide-field optical corrector with a 3.2 degree diameter field of view, a focal plane with 5,000 robotically controlled fiber positioners and 10 fiber fed broadband spectrographs. This article describes the design of the DESI instrument control system (ICS). The ICS coordinates fiber positioner operations, interfaces to the Mayall telescope control system, monitors operating conditions, reads out the 30 spectrograph CCDs and provides observer support and data quality monitoring.

  5. The DESI fiber positioner system

    NASA Astrophysics Data System (ADS)

    Schubnell, Michael; Ameel, Jon; Besuner, Robert W.; Gershkovich, Irena; Heetderks, Henry D.; Hoerler, Philipp; Kneib, Jean-Paul; Heetderks, Henry D.; Silber, Joseph H.; Tarlé, Gregory; Weaverdyck, Curtis

    2016-08-01

    The Dark Energy Spectroscopic Instrument (DESI) is under construction to measure the expansion history of the Universe using the baryon acoustic oscillation technique. A new prime focus corrector for the KPNO Mayall telescope will deliver light to 5,000 fiber optic positioners feeding ten broad-band spectrographs. The positioners have eccentric axis kinematics. Actuation is provided by two 4mm diameter DC brushless gear-motors. An attached electronics board accepts a DC voltage for power and CAN messages for communications and drives the two motors. The positioner accepts the ferrulized and polished fiber and provides a mechanically safe path through its internal mechanism. Positioning is rapid and accurate with typical RMS errors of less than 5 μm.

  6. The FLASHForward facility at DESY

    NASA Astrophysics Data System (ADS)

    Aschikhin, A.; Behrens, C.; Bohlen, S.; Dale, J.; Delbos, N.; di Lucchio, L.; Elsen, E.; Erbe, J.-H.; Felber, M.; Foster, B.; Goldberg, L.; Grebenyuk, J.; Gruse, J.-N.; Hidding, B.; Hu, Zhanghu; Karstensen, S.; Knetsch, A.; Kononenko, O.; Libov, V.; Ludwig, K.; Maier, A. R.; Martinez de la Ossa, A.; Mehrling, T.; Palmer, C. A. J.; Pannek, F.; Schaper, L.; Schlarb, H.; Schmidt, B.; Schreiber, S.; Schwinkendorf, J.-P.; Steel, H.; Streeter, M.; Tauscher, G.; Wacker, V.; Weichert, S.; Wunderlich, S.; Zemella, J.; Osterhoff, J.

    2016-01-01

    The FLASHForward project at DESY is a pioneering plasma-wakefield acceleration experiment that aims to produce, in a few centimetres of ionised hydrogen, beams with energy of order GeV that are of quality sufficient to be used in a free-electron laser. The plasma is created by ionising a gas in a gas cell with a multi-TW laser system. The plasma wave will be driven by high-current-density electron beams from the FLASH linear accelerator. The laser system can also be used to provide optical diagnostics of the plasma and electron beams due to the <30 fs synchronisation between the laser and the driving electron beam. The project will explore both external and internal witness-beam injection techniques. The operation parameters of the experiment are discussed, as well as the scientific programme.

  7. Salt Tolerance of Desorption Electrospray Ionization (DESI)

    SciTech Connect

    Jackson, Ayanna U.; Talaty, Nari; Cooks, R G; Van Berkel, Gary J

    2007-01-01

    Suppression of ion intensity in the presence of high salt matrices is common in most mass spectrometry ionization techniques. Desorption electrospray ionization (DESI) is an ionization method that exhibits salt tolerance, and this is investigated. DESI analysis was performed on three different drug mixtures in the presence of 0, 0.2, 2, 5, 10, and 20% NaCl:KCl weight by volume from seven different surfaces. At physiological concentrations individual drugs in each mixture were observed with each surface. Collision-induced dissociation (CID) was used to provide additional confirmation for select compounds. Multiple stage experiments, to MS5, were performed for select compounds. Even in the absence of added salt, the benzodiazepine containing mixture yielded sodium and potassium adducts of carbamazepine which masked the ions of interest. These adducts were eliminated by adding 0.1% 7M ammonium acetate to the standard methanol:water (1:1) spray solvent. Comparison of the salt tolerance of DESI with that of electrospray ionization (ESI) demonstrated much better signal/noise characteristics for DESI in this study. The salt tolerance of DESI was also studied by performing limit of detection and dynamic range experiments. Even at a salt concentration significantly above physiological concentrations, select surfaces were effective in providing spectra that allowed the ready identification of the compounds of interest. The already high salt tolerance of DESI can be optimized further by appropriate choices of surface and spray solution.

  8. The DESI Wide Field Corrector Optics

    SciTech Connect

    Doel, Peter; Sholl, Michael J.; Liang, Ming; Brooks, David; Flaugher, Brenna; Gutierrez, Gaston; Kent, Stephen; Lampton, Michael; Miller, Timothy; Sprayberry, David

    2014-01-01

    The Dark Energy Spectroscopic instrument (DESI) is a 5000 fiber multi-object spectrometer system under development for installation on the National Optical Astronomy Observatory (NOAO) Kitt Peak 4m telescope (the Mayall telescope). DESI is designated to perform a 14,000° (square) galaxy and Quasi-Stellar Object (QSO) redshift survey to improve estimates of the dark energy equation of state. The survey design imposes numerous constraints on a prime focus corrector design, including field of view, geometrical blur, stability, fiber injection efficiency, zenith angle, mass and coast. The DESI baseline wide-field optical design described herein provides a 3.2 diameter field of view with six 0.8-1.14m diameter lenses and an integral atmospheric dispersion compensator.

  9. The Dark Energy Spectroscopic Instrument (DESI)

    SciTech Connect

    Flaugher, Brenna

    1998-03-01

    The Dark Energy Spectroscopic Instrument (DESI) is a Stage IV ground-based dark energy experiment that will study baryon acoustic oscillations (BAO) and the growth of structure through redshift-space distortions with a wide-area galaxy and quasar spectroscopic redshift survey. The DESI instrument consists of a new wide- eld (3.2 deg. linear eld of view) corrector plus a multi-object spectrometer with up to 5000 robotically positioned optical bers and will be installed at prime focus on the Mayall 4m telescope at Kitt Peak, Arizona. The bers feed 10 three-arm spectrographs producing spectra that cover a wavelength range from 360-980 nm and have resolution of 2000-5500 depending on the wavelength. The DESI instrument is designed for a 14,000 sq. deg. multi-year survey of targets that trace the evolution of dark energy out to redshift 3.5 using the redshifts of luminous red galaxies (LRGs), emission line galaxies (ELGs) and quasars. DESI is the successor to the successful Stage-III BOSS spectroscopic redshift survey and complements imaging surveys such as the Stage-III Dark Energy Survey (DES, currently operating) and the Stage-IV Large Synoptic Survey Telescope (LSST, planned start early in the next decade.

  10. GROUND MOTION ACTIVITIES AT DESY - AN OVERVIEW.

    SciTech Connect

    MONTAG,C.

    2002-09-02

    Ground motion studies have been performed at DESY for more than a decade, covering beam motion in the two-ring e-p collider NEW, luminosity preservation in Linear Colliders, and active stabilization methods. An overview of past and present activities will be given.

  11. Status of the OLYMPUS Experiment at DESY

    SciTech Connect

    Kohl, M.

    2011-10-24

    The OLYMPUS experiment at DESY, Hamburg, Germany will definitively determine the effect of two-photon exchange in elastic lepton-proton scattering by precisely measuring the ratio of positron-proton to electron-proton elastic unpolarized cross sections. In this paper, the physics motivation is summarized, aspects of the experimental setup are discussed and the current status and timeline of the project are reviewed.

  12. DESI focal plate mechanical integration and cooling

    NASA Astrophysics Data System (ADS)

    Lambert, A. R.; Besuner, R. W.; Claybaugh, T. M.; Silber, J. H.

    2016-08-01

    The Dark Energy Spectroscopic Instrument (DESI) is under construction to measure the expansion history of the Universe using the Baryon Acoustic Oscillation technique[1]. The spectra of 40 million galaxies over 14000 sq. deg will be measured during the life of the experiment. A new prime focus corrector for the KPNO Mayall telescope will deliver light to 5000 fiber optic positioners. The fibers in turn feed ten broad-band spectrographs. This paper describes the mechanical integration of the DESI focal plate and the thermal system design. The DESI focal plate is comprised of ten identical petal assemblies. Each petal contains 500 robotic fiber positioners. Each petal is a complete, self-contained unit, independent from the others, with integrated power supply, controllers, fiber routing, and cooling services. The major advantages of this scheme are: (1) supports installation and removal of complete petal assemblies in-situ, without disturbing the others, (2) component production, assembly stations, and test procedures are repeated and parallelizable, (3) a complete, full-scale prototype can be built and tested at an early date, (4) each production petal can be surveyed and tested as a complete unit, prior to integration, from the fiber tip at the focal surface to the fiber slit at the spectrograph. The ten petal assemblies will be installed in a single integration ring, which is mounted to the DESI corrector. The aluminum integration ring attaches to the steel corrector barrel via a flexured steel adapter, isolating the focal plate from differential thermal expansions. The plate scale will be kept stable by conductive cooling of the petal assembly. The guider and wavefront sensors (one per petal) will be convectively cooled by forced flow of air. Heat will be removed from the system at ten liquid-cooled cold plates, one per petal, operating at ambient temperature. The entire focal plate structure is enclosed in an insulating shroud, which serves as a thermal barrier

  13. The NAF: National analysis facility at DESY

    NASA Astrophysics Data System (ADS)

    Haupt, Andreas; Kemp, Yves

    2010-04-01

    Within the framework of a broad collaboration among German particle physicists, the strategic Helmholtz Alliance "Physics a the Terascale", an analysis facility has been set up at DESY. The facility is intended to provide the best possible analysis infrastructure for researches of the ATLAS, CMS, LHCb and ILC experiments and also for theory researchers. In a first part of the contribution, we will present the concept of the NAF and its place in the existing distributed grid landscape of the experiments. In a second part, the building blocks of the NAF will be detailed with an emphasis on technical implementations of some parts: - Usage of VOMS for separating grid resources between collaboration-wide and NAF-specific resources. - interactive and batch cluster and integration with PROOF. - usage of grid proxies to access work group servers and AFS. - the usage and operation of Lustre for fast data access. A special focus is the seamless integration of the facility into the two geographically separated DESY sites and its implications. In a third part, the experience of running the facility for one year will be reported.

  14. Data Processing for the Space-Based Desis Hyperspectral Sensor

    NASA Astrophysics Data System (ADS)

    Carmona, E.; Avbelj, J.; Alonso, K.; Bachmann, M.; Cerra, D.; Eckardt, A.; Gerasch, B.; Graham, L.; Günther, B.; Heiden, U.; Kerr, G.; Knodt, U.; Krutz, D.; Krawcyk, H.; Makarau, A.; Miller, R.; Müller, R.; Perkins, R.; Walter, I.

    2017-05-01

    The German Aerospace Center (DLR) and Teledyne Brown Engineering (TBE) have established a collaboration to develop and operate a new space-based hyperspectral sensor, the DLR Earth Sensing Imaging Spectrometer (DESIS). DESIS will provide spacebased hyperspectral data in the VNIR with high spectral resolution and near-global coverage. While TBE provides the platform and infrastructure for operation of the DESIS instrument on the International Space Station, DLR is responsible for providing the instrument and the processing software. The DESIS instrument is equipped with novel characteristics for an imaging spectrometer such high spectral resolution (2.55 nm), a mirror pointing unit or a CMOS sensor operated in rolling shutter mode. We present here an overview of the DESIS instrument and its processing chain, emphasizing the effect of the novel characteristics of DESIS in the data processing and final data products. Furthermore, we analyse in more detail the effect of the rolling shutter on the DESIS data and possible mitigation/correction strategies.

  15. Hydroforming of Tesla Cavities at Desy

    SciTech Connect

    W. Singer; H. Kaiser; X. Singer; I. Gonin; I. Zhelezov; T. Khabibullin; P. Kneisel; K. Saito

    2000-07-01

    Since several years the development of seamless niobium cavity fabrication by hydro forming is being pursued at DESY. This technique offers the possibility of lower cost of fabrication and perhaps better rf performance of the cavities because of the elimination of electron-beam welds, which in the standard fabrication technique have sometimes lead to inferior cavity performance due to defects. Several single cell 1300 MHz cavities have been formed from high purity seamless niobium tubes, which are under computer control expanded with internal pressure while simultaneously being swaged axially. The seamless tubes have been made by either back extrusion and flow forming or by spinning or deep drawing. Standard surface treatment techniques such as high temperature post purification, buffered chemical polishing (BCP), electropolishing (EP) and high pressure ultra pure water rinsing (HPR) have been applied to these cavities. The cavities exhibited high Q - values of 2 x 10{sup 10} at 2K and residual resistances as low as 3 n{Omega} after the removal of a surface layer of app. 100 {micro}m by BCP. Surprisingly, even at high gradients up to the maximum measured values of E{sub acc} {approx} 33 MV/m the Q-value did not decrease in the absence of field emission as often observed. After electropolishing of additional 100 {micro}m one of the cavities reached an accelerating gradient of E{sub acc} {ge} 42 MV/m.

  16. The Gas Attenuator of FLASH at DESY

    SciTech Connect

    Hahn, Ulrich; Tiedtke, Kai

    2007-01-19

    FLASH (Free electron LASer at Hamburg) as a part of the Deutsches Elektronen Synchroton DESY is the first Free Electron Laser (FEL) user facility for VUV and soft X-ray coherent light experiments. The SASE (Self Amplification by Stimulated Emission) process generates ultra short coherent radiation pulses on the femtosecond time scale with peak powers in the GW range. Several experiments need reliable means to reduce the FEL intensity over many orders of magnitude without changing the photon beam characteristics. Since a reduction of the FEL intensity by variation of machine parameters is not appropriate, a windowless gas-filled cell in combination with differential pumping units is used for attenuating the FEL radiation. This attenuator is placed in the beamline in outside the experimental hall. The total length of the gas cell is 15 m and the maximum gas pressure, which can be handled by the differential pumping units, is about 0.1 mbar. The attenuation range of Nitrogen covers at least 5 orders of magnitude in the spectral range of 19 to 120 nm due to its large absorption cross section. Between 19 and 9 nm and for shorter wavelengths Xenon and Krypton can be used, respectively.

  17. DESI systems engineering: throughput and signal-to-noise

    NASA Astrophysics Data System (ADS)

    Besuner, Robert W.; Sholl, Michael J.

    2016-08-01

    The Dark Energy Spectroscopic Instrument (DESI) is a fiber-fed multi-object spectroscopic instrument under construction to measure the expansion history of the Universe using the Baryon Acoustic Oscillation technique. Management of light throughput and noise in all elements of the instrument is key to achieving the high-level DESI science requirements over the planned survey area and depth within the planned survey duration. The DESI high-level science requirements flow down to instrument performance requirements on system throughput and operational efficiency. Signal-to-noise requirements directly affect minimum required exposure time per field, which dictates the pace and duration of the entire survey. The need to maximize signal (light throughput) and to minimize noise contributions and time overhead due to reconfigurations between exposures drives the instrument subsystem requirements and technical implementation. Throughput losses, noise contributors, and interexposure reconfiguration time are budgeted, tracked, and managed as DESI Systems Engineering resources. Current best estimates of throughput losses and noise contributions from each individual element of the instrument are tracked together in a master budget to calculate overall margin on completing the survey within the allotted time. That budget is a spreadsheet accessible to the entire DESI project.

  18. The Dark Energy Spectroscopic Instrument (DESI): The NOAO DECam Legacy Imaging Survey and DESI Target Selection

    NASA Astrophysics Data System (ADS)

    Schlegel, David J.; Blum, Robert D.; Castander, Francisco Javier; Dey, Arjun; Finkbeiner, Douglas P.; Foucaud, Sebastien; Honscheid, Klaus; James, David; Lang, Dustin; Levi, Michael; Moustakas, John; Myers, Adam D.; Newman, Jeffrey; Nord, Brian; Nugent, Peter E.; Patej, Anna; Reil, Kevin; Rudnick, Gregory; Rykoff, Eli S.; Ford Schlafly, Eddie; Stark, Casey; Valdes, Francisco; Walker, Alistair R.; Weaver, Benjamin; DECam Legacy Survey Collaboration

    2015-01-01

    The DECam Legacy Survey will conduct a 3-band imaging survey of the Sloan Digital Sky Survey (SDSS) extragalactic footprint. The Dark Energy Camera (DECam) will be used to image the 6700 square degree footprint overlapping SDSS in the region -20 < Dec < +30 deg, to depths of g=24.7, r=23.9, z=23.0. The survey will be conducted from Fall 2014 through Spring 2017, with periodic data releases beginning in March 2015. These releases will include catalogs constructed with the Tractor-based multi-wavelength forced photometry applied to the DECam and WISE satellite data.The Dark Energy Spectroscopic Instrument (DESI) will observe 24 million galaxies and quasars in a 14,000 square degree extragalactic footprint. The targeting in that footprint will be provided by a combination of these DECam data, the MOSAIC camera on the Mayall 4-meter, and the 90Prime camera on the Bok Telescope.

  19. Progress on the fabrication of the DESI corrector optics

    NASA Astrophysics Data System (ADS)

    Miller, Timothy N.; Doel, Peter; Brooks, David; Sholl, Michael J.; Levi, Michael E.

    2016-08-01

    The Dark Energy Spectroscopic Instrument (DESI) is under construction to measure the expansion history of the Universe using the Baryon Acoustic Oscillation technique. The spectra of 40 million galaxies over 14000 square degrees will be measured during the life of the experiment. A new prime focus corrector for the Kitt Peak National Observatory Mayall telescope will deliver light to 5000 fiber optic positioners. The fibers in turn feed ten broad-band spectrographs. We will describe the status of the DESI corrector optics, a series of 0.8 to 1.1-meter fused silica and borosilicate lenses currently being fabricated to demanding requirements. We will describe the specs for lenses that are finished or underway, including surface figure, homogeneity, and other parameters; the current schedule for lens production; and a comparison against DESI corrector requirements.

  20. Direct Analysis of Pharmaceutical Drugs Using Nano-DESI MS

    PubMed Central

    Cardoso-Palacios, Carlos

    2016-01-01

    Counterfeit pharmaceutical drugs imply an increasing threat to the global public health. It is necessary to have systems to control the products that reach the market and to detect falsified medicines. In this work, molecules in several pharmaceutical tablets were directly analyzed using nanospray desorption electrospray ionization mass spectrometry (nano-DESI MS). Nano-DESI is an ambient surface sampling technique which enables sampling of molecules directly from the surface of the tablets without any sample pretreatment. Both the active pharmaceutical ingredients (APIs) and some excipients were detected in all analyzed tablets. Principal component analysis was used to analyze mass spectral features from different tablets showing strong clustering between tablets with different APIs. The obtained results suggest nano-DESI MS as future tool for forensic analysis to discern APIs present in unknown tablet samples. PMID:27766177

  1. Coupling of Ultrafast LC with Mass Spectrometry by DESI

    NASA Astrophysics Data System (ADS)

    Cai, Yi; Liu, Yong; Helmy, Roy; Chen, Hao

    2014-10-01

    Recently we reported a desorption electrospray ionization (DESI) interface to combine liquid chromatography (LC) with mass spectrometry (MS) using a new LC eluent splitting strategy through a tiny orifice on LC capillary tube [ J. Am. Soc. Mass Spectrom. 25, 286 (2014)]. The interface introduces negligible dead volume and back pressure, thereby allowing "near real-time" MS detection, fast LC elution, and online MS-directed purification. This study further evaluates the LC/DESI-MS performance with focus of using ultra-fast LC. Using a monolithic C18 column, metabolites in urine can be separated within 1.6 min and can be online collected for subsequent structure elucidation (e.g., by NMR, UV, IR) in a recovery yield up to 99%. Using a spray solvent with alkaline pH, negative ions could be directly generated for acidic analytes (e.g., ibuprofen) in acidic LC eluent by DESI, offering a novel protocol to realize "wrong-way around" ionization for LC/MS analysis. In addition, DESI-MS is found to be compatible with ultra-performance liquid chromatography (UPLC) for the first time.

  2. Novel Aspects of the DESI Data Acquisition System

    NASA Astrophysics Data System (ADS)

    Beaufore, Lucas; Honscheid, Klaus; Elliott, Ann; Dark Energy Spectroscopic Instrument Collaboration

    2015-04-01

    The Dark Energy Spectroscopic Instrument (DESI) will measure the effect of dark energy on the expansion of the universe. It will obtain optical spectra for tens of millions of galaxies and quasars, constructing a 3-dimensional map spanning the nearby universe to 10 billion light years. The survey will be conducted on the Mayall 4-meter telescope at Kitt Peak National Observatory starting in 2018. In order to achieve these scientific goals the DESI collaboration is building a high throughput spectrograph capable of observing thousands of spectra simultaneously. In this presentation we discuss the DESI instrument control and data acquisition system that is currently being developed to operate the 5,000 fiber positioners in the focal plane, the 10 spectrographs each with three CDD cameras and every other aspect of the instrument. Special emphasis will be given to novel aspects of the design including the use of inexpensive Linux-based microcontrollers such as the Raspberry PI to control a number of DESI hardware components.

  3. Wissenschaftliche Abhandlungen

    NASA Astrophysics Data System (ADS)

    Boltzmann, Ludwig; Hasenöhrl, Friedrich

    2012-08-01

    Vorwort; 1. Über die Bewegung der Elektrzität in krummen Flächen; 2. Über die mechanische Bedeutung des zweiten Hauptsatzes der Wärmetheorie; 3. Über die Anzahl der Atome; 4. Über die Integrale linearer Differentialgleighungen; 5. Studien über das Gleichgewicht der lebendingen Kraft; 6. Lösung eines mechanischen Problems; 7. Über die Festigkeit zweier mit Druck übereinander gesteckter zylindrischer Röhren; 8. Über die elektrodynamische Wechselwirkung der Reile eines elektrishen Stromes von veränderlicher Gestalt; 9. Bemerkung zur Abhandlung des Herrn R. Most; 10. Erwiderung an Herrn Most; 11. Über die von bewegten Gasmassen geleistete Arbeit; 12. Noch einiges über Kohlrauschs Versuch; 13. Über die Ableitung der Grundgleichungen der Kapillarität; 14. Über eine neue optische Methode; 15. Boiling points of organic bodies; 16. Über die Druckkräfte, welche auf Ringe wriksam sind; 17. Zur Priorität der Auffindung der Beziehung zwischen dem zweiten Hauptsatze der mechanischen Wärmetheorie; 18. Über das Wärmegleichgewicht zwischen mehratomigen Gasmolekülen; 19. Einige allgemeine Sätze über Wärmegleichgewicht; 20. Analytischer Beweis des zweiten Hauptsatzen der mechanischen Wärmetheorie; 21. Über das Wirkungsgesetz der Molekülarkräfte; 22. Weiteren Studien über das Wärmegleichgewicht unter Gasmolekülen; 23. Resultate einer Experimentaluntersuchung; 24. Experimentelle Bestimmung der Dielektrizitätskonstante von Isolatoren; 25. Experimentaluntersuchung über die elektrostatische Fernwirkung dielektrischer Körper; 26. Experimentelle Bestimmung der Dielektrizitätskonstante einiger Gase; 27. Über einige an meinen Versuchen; 28. Über die Verschiedenheit der Dielektrizitätskonstante des Körper unter dem Einflusse elektrische Kräfte; 29. Experimentaluntersuchung über das Verhalten nicht leitender Körper unter dem Einflusse electrischer Kräfte; 30. Zur Theorie der elastische Nachwirkung; 31. Über den Zusammenhang zwischen der Drehung der Polarisationsebene und der Wellenlänge der verschiedenen Farben.

  4. Fieldbus Device Drivers for Accelerator Control at DESY

    NASA Astrophysics Data System (ADS)

    Wu, Honggong

    In order to interface the DESY fieldbus adapter, SEDAC (SErial Data Acquisition and Control system), a full duplex device driver was developed for the Windows NT, Linux, VxWorks, and Solaris operating systems. Detailed driver development issues as well as a common user interface will be presented, along with a comparison of the device drivers among the different operating systems. In particular, we shall present benchmark results concerning general performance as well as ease of development.

  5. The alignment and assembly of the DESI prime focus corrector

    NASA Astrophysics Data System (ADS)

    Brooks, David; Doel, Peter; Besuner, Robert; Flaugher, Brenna; Gallo, Giuseppe; Gutierrez, Gaston; Kent, Stephen; Lampton, Michael; Levi, Michael; Liang, Ming; Miller, Timothy N.; Sprayberry, David; Stefanik, Andrew

    2016-08-01

    The Dark Energy Spectroscopic Instrument (DESI), which is currently under construction, is designed to measure the expansion history of the Universe using the Baryon Acoustic Oscillation technique. The spectra of 40 million galaxies over 14000 sq deg will be measured during the life of the experiment. A new prime focus corrector for the KPNO Mayall telescope will deliver light to 5000 fibre optic positioners. The fibres in turn feed ten broad-band spectrographs. The prime focus corrector for DESI consists of six lenses that range in diameter from 0.80 - 1.14 meters and from 83 - 237 kg in weight. The alignment of the large lenses of the optical corrector poses a significant challenge as in order to meet the fibre throughput requirements they have to be aligned to within a tolerance of 50 micrometres. This paper details the design for the cells that will hold the lenses and the alignment and assembly procedure for the mounting of the lenses into the cells and into the complete barrel assembly. This is based on the experience obtained from the alignment of the Dark Energy Camera (DECam) instrument which was successfully assembled and aligned by the same team and we include in the paper the lessons learnt and design modifications that will be implemented on the DESI system.

  6. Faster, More Reproducible DESI-MS for Biological Tissue Imaging

    NASA Astrophysics Data System (ADS)

    Tillner, Jocelyn; Wu, Vincen; Jones, Emrys A.; Pringle, Steven D.; Karancsi, Tamas; Dannhorn, Andreas; Veselkov, Kirill; McKenzie, James S.; Takats, Zoltan

    2017-10-01

    A new, more robust sprayer for desorption electrospray ionization (DESI) mass spectrometry imaging is presented. The main source of variability in DESI is thought to be the uncontrolled variability of various geometric parameters of the sprayer, primarily the position of the solvent capillary, or more specifically, its positioning within the gas capillary or nozzle. If the solvent capillary is off-center, the sprayer becomes asymmetrical, making the geometry difficult to control and compromising reproducibility. If the stiffness, tip quality, and positioning of the capillary are improved, sprayer reproducibility can be improved by an order of magnitude. The quality of the improved sprayer and its potential for high spatial resolution imaging are demonstrated on human colorectal tissue samples by acquisition of images at pixel sizes of 100, 50, and 20 μm, which corresponds to a lateral resolution of 40-60 μm, similar to the best values published in the literature. The high sensitivity of the sprayer also allows combination with a fast scanning quadrupole time-of-flight mass spectrometer. This provides up to 30 times faster DESI acquisition, reducing the overall acquisition time for a 10 mm × 10 mm rat brain sample to approximately 1 h. Although some spectral information is lost with increasing analysis speed, the resulting data can still be used to classify tissue types on the basis of a previously constructed model. This is particularly interesting for clinical applications, where fast, reliable diagnosis is required. [Figure not available: see fulltext.

  7. Modulators for the S-band test linac at DESY

    SciTech Connect

    Bieler, M.; Choroba, S.; Hameister, J.; Lewin, H.

    1995-07-05

    The development of adequate modulators for high peak power klystrons is one of the focus points for linear collider R&D programs. For the DESY/THD S-band linear collider study 150 MW rf-pulse power at 50 Hz repetition rate and 3 {mu}s pulse duration is required [1]. Two different modulator schemes are under investigation. One is the conventional line type pulser, using a pulse forming network and a step up transformer, the other one is a hard tube pulser, using a dc power source at the full klystron voltage and a switch tube. This paper is focused on the modulator development for the S-band Test Linac at DESY. After a short overview over the test linac and a brief description of the 150 MW S-band klystron the circuitry of the line type pulse (LTP) is given. A hard tube pulser (HTP), which switches the high voltage directly from a storage capacitor to the klystron, has been built up at DESY. Circuitry and the results of the commissioning of the switch tube are reported. {copyright} {ital 1995} {ital American} {ital Institute} {ital of} {ital Physics}.

  8. Modulators for the S-band test linac at DESY

    NASA Astrophysics Data System (ADS)

    Bieler, M.; Choroba, S.; Hameister, J.; Lewin, H.-Ch.

    1995-07-01

    The development of adequate modulators for high peak power klystrons is one of the focus points for linear collider R&D programs. For the DESY/THD S-band linear collider study 150 MW rf-pulse power at 50 Hz repetition rate and 3 μs pulse duration is required [1]. Two different modulator schemes are under investigation. One is the conventional line type pulser, using a pulse forming network and a step up transformer, the other one is a hard tube pulser, using a dc power source at the full klystron voltage and a switch tube. This paper is focused on the modulator development for the S-band Test Linac at DESY. After a short overview over the test linac and a brief description of the 150 MW S-band klystron the circuitry of the line type pulse (LTP) is given. A hard tube pulser (HTP), which switches the high voltage directly from a storage capacitor to the klystron, has been built up at DESY. Circuitry and the results of the commissioning of the switch tube are reported.

  9. Faster, More Reproducible DESI-MS for Biological Tissue Imaging

    NASA Astrophysics Data System (ADS)

    Tillner, Jocelyn; Wu, Vincen; Jones, Emrys A.; Pringle, Steven D.; Karancsi, Tamas; Dannhorn, Andreas; Veselkov, Kirill; McKenzie, James S.; Takats, Zoltan

    2017-06-01

    A new, more robust sprayer for desorption electrospray ionization (DESI) mass spectrometry imaging is presented. The main source of variability in DESI is thought to be the uncontrolled variability of various geometric parameters of the sprayer, primarily the position of the solvent capillary, or more specifically, its positioning within the gas capillary or nozzle. If the solvent capillary is off-center, the sprayer becomes asymmetrical, making the geometry difficult to control and compromising reproducibility. If the stiffness, tip quality, and positioning of the capillary are improved, sprayer reproducibility can be improved by an order of magnitude. The quality of the improved sprayer and its potential for high spatial resolution imaging are demonstrated on human colorectal tissue samples by acquisition of images at pixel sizes of 100, 50, and 20 μm, which corresponds to a lateral resolution of 40-60 μm, similar to the best values published in the literature. The high sensitivity of the sprayer also allows combination with a fast scanning quadrupole time-of-flight mass spectrometer. This provides up to 30 times faster DESI acquisition, reducing the overall acquisition time for a 10 mm × 10 mm rat brain sample to approximately 1 h. Although some spectral information is lost with increasing analysis speed, the resulting data can still be used to classify tissue types on the basis of a previously constructed model. This is particularly interesting for clinical applications, where fast, reliable diagnosis is required.

  10. Fiber system design for the Dark Energy Spectroscopic Instrument (DESI)

    NASA Astrophysics Data System (ADS)

    Poppett, Claire; Sharples, Ray; Edelstein, Jerry; Schmoll, Jürgen; Bramall, David; Fagrelius, Parker

    2016-08-01

    The Dark Energy Spectroscopic Instrument (DESI) is under construction to measure the expansion history of the Universe using the Baryon Acoustic Oscillation technique. The spectra of 40 million galaxies over 14000 sq deg will be measured during the life of the experiment. A new prime focus corrector for the KPNO Mayall telescope will deliver light to 5000 fiber optic positioners. The fibers in turn feed ten broad-band spectrographs. We will describe the Fiber Systems design with specific emphasis on novel approaches and essential elements that lead to exceptional performance.

  11. The European XFEL Free Electron Laser at DESY

    ScienceCinema

    Weise, Hans [Deutsches Elektronen-Synchrotron, Germany

    2016-07-12

    The European X-ray Free-Electron laser Facility (XFEL) is going to be built in an international collaboration at the Deutsches Elektronen-Synchrotron (DESY), Germany, and the Technical Design Report was published in 2006. The official project is expected for summer 2007. This new facility will offer photon beams at wavelengths as short as 1 angstrom with highest peak brilliance being more than 100 million times higher than present day synchrotron radiation sources. The radiation has a high degree of transverse coherence and the pulse duration is reduced from {approx}100 picoseconds (typ. for SR light sources) down to the {approx}10 femtosecond time domain. The overall layout of the XFEL will be described. This includes the envisaged operation parameters for the linear accelerator using superconducting TESLA technology. The complete design is based on the actually operated FLASH free-electron laser at DESY. Experience with the operation during first long user runs at wavelengths from 30 to 13 nm will be described in detail.

  12. Detecting Cheatgrass on the Colorado Plateau using Landsat data: A tutorial for the DESI software

    USGS Publications Warehouse

    Kokaly, Raymond F.

    2011-01-01

    Invasive plant species disrupt native ecosystems and cause economic harm to public lands. In this report, an example of applying the Detection of Early Season Invasives software to mapping cheatgrass infestations is given. A discussion of each step of the DESI process is given, including selection of Landsat images. Tutorial data, covering a semi-arid area in southern Utah, are distributed with this report. Tips on deriving the inputs required to run DESI are provided. An approach for evaluating and adjusting detection parameters by examining interim products of DESI is discussed.

  13. The Dark Energy Spectroscopic Instrument (DESI) instrument mechanism control systems

    NASA Astrophysics Data System (ADS)

    Coker, Carl T.; Pappalardo, Daniel; Pogge, Richard; Martini, Paul; Derwent, Mark; O'Brien, Thomas P.; Honscheid, Klaus

    2016-08-01

    The Dark Energy Spectroscopic Instrument (DESI) is under construction to measure the expansion history of the Universe using the Baryon Acoustic Oscillation technique. The spectra of 40 million galaxies over 14,000 sq deg will be measured during the life of the experiment. A new prime focus corrector for the KPNO Mayall telescope will deliver light to 5,000 fiber optic positioners. The fibers in turn feed ten broad-band spectrographs. We present the design details of the instrument mechanism control systems for the spectrographs. Each spectrograph has a stand-alone mechanism control box that operates the unit's four remotely-operated mechanisms (two shutters and two Hartmannn doors), and provides a suite of temperature and humidity sensors. Each control box is highly modular, and is operated by a dedicated on-board Linux computer to provide all of the control and monitoring functions. We describe our solution for integrating a number of network-connected devices within each unit spectrograph, and describe the basic software architecture.

  14. Integration and testing of the DESI spectrograph prototype

    NASA Astrophysics Data System (ADS)

    Perruchot, S.; Secroun, A.; Blanc, P.-E.; Ronayette, S.; Régal, X.; Castagnoli, G.; Le Van Suu, A.; Ealet, A.; Cuby, J.-G.; Elliot, A.; Honscheid, K.; Jelinsky, P.

    2016-08-01

    The Dark Energy Spectroscopic Instrument (DESI) is under construction to measure the expansion history of the Universe using the Baryon Acoustic Oscillation probe. The KPNO Mayall telescope will deliver light to 5000 fibers feeding ten broadband spectrographs. A consortium of Aix-Marseille University (AMU) and CNRS laboratories (LAM, OHP and CPPM) together with the WINLIGHT Systems company (Pertuis-France) has committed to integrate and validate the performance requirements of the full spectrographs, equipped with their cryostats, shutters and other mechanisms. An AIT plan has been defined and dedicated test equipment has been designed and implemented. This equipment simulates the fiber input illumination from the telescope, and offers a variety of continuum and line sources. Flux levels are adjustable and can illuminate one or several fibers along the test slit. It is fully remotely controlled and interfaced to the Instrument Control System. Specific analysis tools have also been developed to verify and monitor the performance and stability of the spectrographs. All these developments are described in details.

  15. Transport of DESY 1.3 GHZ Cryomodule at Fermilab

    SciTech Connect

    McGee, M.W.; Arkan, T.; Borissov, E.; Leibfritz, J.; Schappert, W.; Barbanotti, S.; /LASA, Segrate /INFN, Milan

    2009-05-01

    In an exchange of technology agreement, Deutsches Elektron-Synchrotron (DESY) Laboratory in Hamburg Germany has provided a 1.3 GHz cryomodule 'kit' to Fermilab. The cryomodule components (qualified dressed cavities, cold mass parts, vacuum vessel, etc.) sent from Germany in pieces were assembled at Fermilab's Cryomodule Assembly Facility (CAF). The cavity string was assembled at CAF-MP9 Class 10 cleanroom and then transported to CAF-ICB cold mass assembly area via a flatbed air ride truck. Finite Element Analysis (FEA) studies were implemented to define location of instrumentation for initial cold mass transport, providing modal frequencies and shapes. Subsequently, the fully assembled cryomodule was transported to the SRF Accelerator Test Facility at New Muon Lab (NML). Internal geophones (velocity sensors) were attached during the coldmass assembly for transport (warm) and operational (cold) measurements. A description of the isolation system that maintained alignment during transport and protected fragile components is provided. Shock and vibration measurement results of each transport and modal analysis are discussed.

  16. The DESI shutter with integrated fiber illumination system

    NASA Astrophysics Data System (ADS)

    Derwent, Mark A.; O'Brien, Thomas P.; Pappalardo, Daniel P.; Martini, Paul; Coker, Carl T.; Pogge, Richard W.

    2016-08-01

    The Dark Energy Spectroscopic Instrument (DESI) is under construction to measure the expansion history of the Universe using the Baryon Acoustic Oscillation technique. The spectra of 40 million galaxies over 14,000 sq deg will be measured during the life of the experiment. A new prime focus corrector for the KPNO Mayall telescope will deliver light to 5000 fiber optic positioners. The fibers in turn feed ten broad-band spectrographs. We describe the unique shutter design that incorporates a fiber illumination system into the shutter blade. When activated, the fiber illumination system directs intense 430-480nm wavelength light at the instrument's fiber slit in order to back-illuminate the telescope's focal plane and verify the location of the robotic fiber positioners. The back-illumination is typically active during science exposure read-outs and therefore requires the shutter to attenuate light by a factor of at least 107. This paper describes how we have integrated the fiber illumination system into the shutter blade, as well as incorporated an inflatable seal around the shutter aperture to achieve the light attenuation requirement. We also present lab results that characterize the fiber illumination and shutter attenuation. Finally, we discuss the control scheme that executes exposure and fiber illumination modes, and meets the shutter timing requirements.

  17. Communication architecture system for fiber positioning of DESI spectrograph

    NASA Astrophysics Data System (ADS)

    Kaci, Karim; Glez-de-Rivera, Guillermo; Lopez-Colino, Fernando; Martinez-Garcia, M. Sofia; Masa, Jose L.; Garrido, Javier; Sanchez, Justo; Prada, Francisco

    2016-07-01

    This paper presents a design proposal for controlling the five thousand fiber positioners within the focal plate of the DESI instrument. Each of these positioners is a robot which allows positioning its optic fiber with a resolution within the range of few microns. The high number and density of these robots poses a challenge for handling the communication from a central control device to each of these five thousand. Furthermore, an additional restriction applies as the required time to communicate to every robot of its position must be smaller than a second. Additionally. a low energy consumption profile is also desired. Both wireless and wired communication protocols have been evaluated, proposing single-technology-based architectures and hybrid ones (a combination of them). Among the wireless solutions, ZigBee and CyFi have been considered. Using simulation tools these wireless protocols have been discarded as they do not allow an efficient communication. The studied wired protocols comprise I2C, CAN and Ethernet. The best solution found is a hybrid multilayer architecture combining both Ethernet and I2C. A 100 Mbps Ethernet based network is used to communicate the central control unit with ten management boards. Each of these boards is a low-cost, low-power embedded device that manages a thirty six degrees sector of the sensing plate. Each of these boards receives the positioning data for five hundred robots and communicate with each one through a fast mode plus I2C bus. This proposal allows to communicate the positioning information for all five thousand robots in 350 ms total.

  18. The New Hyperspectral Sensor Desis on the Multi-Payload Platform Muses Installed on the Iss

    NASA Astrophysics Data System (ADS)

    Müller, R.; Avbelj, J.; Carmona, E.; Eckardt, A.; Gerasch, B.; Graham, L.; Günther, B.; Heiden, U.; Ickes, J.; Kerr, G.; Knodt, U.; Krutz, D.; Krawczyk, H.; Makarau, A.; Miller, R.; Perkins, R.; Walter, I.

    2016-06-01

    The new hyperspectral instrument DLR Earth Sensing Imaging Spectrometer (DESIS) will be developed and integrated in the Multi-User-System for Earth Sensing (MUSES) platform installed on the International Space Station (ISS). The DESIS instrument will be launched to the ISS mid of 2017 and robotically installed in one of the four slots of the MUSES platform. After a four month commissioning phase the operational phase will last at least until 2020. The MUSES / DESIS system will be commanded and operated by the publically traded company TBE (Teledyne Brown Engineering), which initiated the whole program. TBE provides the MUSES platform and the German Aerospace Center (DLR) develops the instrument DESIS and establishes a Ground Segment for processing, archiving, delivering and calibration of the image data mainly used for scientific and humanitarian applications. Well calibrated and harmonized products will be generated together with the Ground Segment established at Teledyne. The article describes the Space Segment consisting of the MUSES platform and the instrument DESIS as well as the activities at the two (synchronized) Ground Segments consisting of the processing methods, product generation, data calibration and product validation. Finally comments to the data policy are given.

  19. Qualitative analysis of seized cocaine samples using desorption electrospray ionization- mass spectrometry (DESI-MS).

    PubMed

    Stojanovska, Natasha; Tahtouh, Mark; Kelly, Tamsin; Beavis, Alison; Fu, Shanlin

    2015-05-01

    Desorption electrospray ionization - mass spectrometry (DESI-MS) is a useful technique for the qualitative analysis of compounds found in seized drug material. In this study, DESI-MS was utilized in the screening analysis of illicit cocaine samples. The technique was also applied to the geographical origin determination of these samples. The limit of detection was determined to be 24.3 µg (or 3.47 µg/mm(2) ) and the analysis time was less than 1 minute per sample. The intra-day and inter-day precision for the detection of cocaine was 11 % and 42 %, respectively; therefore the quantitative data provided by DESI-MS was limited in its use for accurate determination of cocaine concentration in a sample. Using the quadrupole time-of-flight (QTOF) mass spectrometer, the presence of cocaine and impurities detected were confirmed by accurate tandem MS data. The qualitative chemical profiles obtained using DESI-MS were compared to two popular analysis techniques, GC-MS and LC-MS. The effects of a range of adulterants including caffeine, procaine, levamisole, lignocaine, paracetamol, and atropine on the detectability of cocaine were also investigated. It was found that the addition of these adulterants in a cocaine sample did not prevent the detection of the analyte itself (there was slight enhancement in some samples), which was useful in drug detection. The detection of truxillines in the seized samples by DESI-MS aided in the preliminary determination of geographical origin, i.e., Bolivian, Peruvian or Colombian leaf origin. The application of DESI-MS to the qualitative analysis and screening of seized cocaine samples demonstrates the potential and applicability of the technique to the fast chemical profiling of illicit samples. Copyright © 2014 John Wiley & Sons, Ltd.

  20. Forensic applications of desorption electrospray ionisation mass spectrometry (DESI-MS).

    PubMed

    Morelato, Marie; Beavis, Alison; Kirkbride, Paul; Roux, Claude

    2013-03-10

    Desorption electrospray ionisation mass spectrometry (DESI-MS) is an emerging analytical technique that enables in situ mass spectrometric analysis of specimens under ambient conditions. It has been successfully applied to a large range of forensically relevant materials. This review assesses and highlights forensic applications of DESI-MS including the analysis and detection of illicit drugs, explosives, chemical warfare agents, inks and documents, fingermarks, gunshot residues and drugs of abuse in urine and plasma specimens. The minimal specimen preparation required for analysis and the sensitivity of detection achieved offer great advantages, especially in the field of forensic science. Crown Copyright © 2013. Published by Elsevier Ireland Ltd. All rights reserved.

  1. Studies for a beam trajectory monitor for TTF-FEL at DESY

    SciTech Connect

    Mueller, Ute Carina

    1997-06-01

    A beam trajectory monitor for the FEL at the TESLA test facility at DESY has been proposed for the reconstruction of the electron beam trajectory by observing the spontaneous undulator radiation along the beam using the pinhole camera principle. Simulations for this concept have been performed and results are presented here.

  2. ProtoDESI: risk reduction experiment for the Dark Energy Spectroscopic Instrument

    NASA Astrophysics Data System (ADS)

    Fagrelius, Parker; Baltay, Charles; Bebek, Christopher; Besuner, Robert; Castander, Francisco J.; Dey, Arjun; Buckley-Geer, Elizabeth; Elliott, Ann; Emmet, William; Flaugher, Brenna; Gershkovich, Irena; Honscheid, Klaus; Joyce, Dick; Kent, Stephen; Marshall, Robert; Probst, Ronald; Rabinowitz, David; Reil, Kevin; Schlegel, David; Schubnell, Michael; Serrano, Santiago; Silber, Joseph; Sprayberry, David; Tarle, Greg

    2016-08-01

    The Dark Energy Spectroscopic Instrument (DESI) is under construction to measure the expansion history of the Universe using the Baryon Acoustic Oscillation technique. The spectra of 40 million galaxies over 14,000 sq. deg. will be measured during the life of the experiment. A new prime focus corrector for the KPNO Mayall telescope will deliver light to 5000 fiber optic positioners. The fibers in turn feed ten broad-band spectrographs. We describe the ProtoDESI experiment, planned for installation and commissioning at the Mayall telescope in the fall of 2016, which will test the fiber positioning system for DESI. The ProtoDESI focal plate, consisting of 10 fiber positioners, illuminated fiducials, and a guide, focus and alignment (GFA) sensor module, will be installed behind the existing Mosaic prime focus corrector. A Fiber View Camera (FVC) will be mounted to the lower surface of the primary mirror cell and a subset of the Instrument Control System (ICS) will control the ProtoDESI subsystems, communicate with the Telescope Control System (TCS), and collect instrument monitoring data. Short optical fibers from the positioners will be routed to the back of the focal plane where they will be imaged by the Fiber Photometry Camera (FPC) or back-illuminated by a LED system. Target objects will be identified relative to guide stars, and using the GFA in a control loop with the ICS/TCS system, the guide stars will remain stable on pre-identified GFA pixels. The fiber positioners will then be commanded to the target locations and placed on the targets iteratively, using the FVC to centroid on back-illuminated fibers and fiducials to make corrective delta motions. When the positioners are aligned with the targets on-sky, the FPC will measure the intensities from the positioners' fibers which can then be dithered to look for intensity changes, indicating how well the fibers were initially positioned on target centers. The final goal is to operate ProtoDESI on the Mayall

  3. Nutritional value of raw and autoclaved kabuli and desi chickpeas (Cicer arietinum L.) for growing chickens.

    PubMed

    Viveros, A; Brenes, A; Elices, R; Arija, I; Canales, R

    2001-05-01

    1. Two experiments were carried out to determine the effect of inclusion of raw (kabuli and desi) and autoclaved (desi) chickpea seeds in wheat-based starter diets in chickens grown to 28 d of age on the performance, digestive organ sizes, nitrogen-corrected apparent metabolisable energy (AMEn), ileal apparent protein and starch digestibilities (APD and ASD) and intestinal alpha-amylase and trypsin activities. 2. In the first experiment, diets were formulated to contain 0, 150, 300 and 450 g/kg of raw kabuli chickpea seeds. Increasing the proportion of seed in the diet negatively influenced body weight gain, food intake and food efficiency. The relative weights of the pancreas, liver and gizzard and the relative lengths of duodenum, jejunum, ileum and caeca were increased significantly when the chickpea seeds were included in the diets. Correspondingly, APD, ASD, alpha-amylase and trypsin activities and AMEn were reduced significantly when the chickpea seed was incorporated in the diets. 3. In the 2nd experiment, diets were formulated to contain 75 and 150 g/kg of raw and autoclaved desi chickpea seeds. Weight gain and food intake of the chicks given desi chickpea diets were significantly reduced compared with those fed on the control diet. Increasing the proportion of seed in the diet negatively influenced body weight gain, food intake and food efficiency. Moreover, a significant increment in the relative weights of liver and pancreas, and in the relative lengths of duodenum, ileum and caeca was observed when the concentration of chickpea seeds in the diets was increased. Feeding autoclaved seeds significantly increased the weight gains and the food intakes. However, food efficiency was not modified by the autoclaving. Relative weights of gizzard and liver and relative lengths of ileum were decreased significantly by the inclusion of autoclaved desi chickpea in the diet. 4. We concluded that the inclusion of kabuli (up to 450 g/kg) and desi (up to 150 g

  4. DESI then MALDI mass spectrometry imaging of lipid and protein distributions in single tissue sections

    PubMed Central

    Eberlin, Livia S; Liu, Xioahui; Ferreira, Christina R.; Santagata, Sandro; Agar, Nathalie Y.R.; Cooks, R. Graham

    2011-01-01

    Imaging mass spectrometry (MS) is a powerful technique for mapping the spatial distributions of a wide range of chemical compounds simultaneously from a tissue section. Co-localization of the distribution of individual molecular species including particular lipids and proteins, and correlation with the morphological features of a single tissue section is highly desirable for comprehensive tissue analysis and disease diagnosis. We now report on the use, in turn, of desorption electrospray ionization (DESI), matrix assisted laser desorption ionization (MALDI) and then optical microscopy to image lipid and protein distributions in a single tissue section. This is possible through the use of histologically compatible DESI solvent systems, which allow for sequential analyses of the same section by DESI then MALDI. Hematoxylin and Eosin (H&E) staining was performed on the same section after removal of the MALDI matrix. This workflow allowed chemical information to be unambiguously matched to histological features in mouse brain tissue sections. The lipid sulfatide(24:1), detected at m/z 888.8 by DESI imaging, was co-localized with the protein MBP isoform 8, detected at m/z 14117 by MALDI imaging, in regions corresponding to the corpus callosum substructure of the mouse brain, as confirmed in the H&E images. Correlation of lipid and protein distributions with histopathological features was also achieved for human brain cancer samples. Higher tumor cell density was observed in regions demonstrating higher relative abundances of oleic acid, detected by DESI imaging at m/z 281.4, and the protein calcyclin, detected by MALDI at m/z 10085, for a human glioma sample. Since correlation between molecular signatures and disease state can be achieved, we expect that this methodology will significantly enhance the value of MS imaging in molecular pathology for diagnosis. PMID:21975048

  5. Test Sequence for Superconducting XFEL Cavities in the Accelerator Module Test Facility (AMTF) at DESY

    NASA Astrophysics Data System (ADS)

    Schaffran, J.; Petersen, B.; Reschke, D.; Swierblewski, J.

    The European XFEL is a new research facility currently under construction at DESY in the Hamburg area in Germany. From 2016 onwards, it will generate extremely intense X-ray flashes that will be used by researchers from all over the world. The main part of the superconducting European XFEL linear accelerator consists of 100 accelerator modules with 800 RF-cavities inside. The accelerator modules, superconducting magnets and cavities will be tested in the accelerator module test facility (AMTF) at DESY. This paper gives an overview of the test sequences for the superconducting cavities, applied in the preparation area and at the two cryostats (XATC) of the AMTF-hall, and describes the complete area. In addition it summarizes the tests and lessons learnt until the middle of 2014.

  6. Improved DESI-MS Performance using Edge Sampling and aRotational Sample Stage

    SciTech Connect

    Kertesz, Vilmos; Van Berkel, Gary J

    2008-01-01

    The position of the surface to be analyzed relative to the sampling orifice or capillary into the mass spectrometer has been known to dramatically affect the observed signal levels in desorption electrospray ionization mass spectrometry (DESIMS). In analyses of sample spots on planar surfaces, DESI-MS signal intensities as much as five times greater were routinely observed when the bottom of the sampling capillary was appropriately positioned beneath the surface plane ( edge sampling") compared to when the capillary just touched the surface. To take advantage of the optimum "edge sampling" geometry and to maximize the number of samples that could be analyzed in this configuration, a rotational sample stage was integrated into a typical DESI-MS setup. The rapid quantitative determination of caffeine in two diet sport drinks (Diet Turbo Tea, Speed Stack Grape) spiked with an isotopically labeled internal standard demonstrated the utility of this approach.

  7. Stray light assessment and mitigation for the DESI front-end optical system

    NASA Astrophysics Data System (ADS)

    Miller, Timothy N.; Lampton, Michael; Besuner, Robert W.; Sholl, Michael J.; Liang, Ming; Ellis, Scott

    2016-08-01

    The Dark Energy Spectroscopic Instrument (DESI) is under construction to measure the expansion history of the Universe, using the Baryon Acoustic Oscillation technique and the growth of structure using redshift-space distortions (RSD). The spectra of 40 million galaxies over 14000 square degrees will be measured during the life of the experiment. A new prime focus corrector for the KPNO Mayall telescope will deliver light to 5000 fiber optic positioners. The fibers in turn feed ten broad-band spectrographs. We will describe modeling and mitigation of stray light within the front end of DESI, consisting of the Mayall telescope and the corrector assembly. This includes the creation of a stray light model, quantitative analysis of the unwanted light at the corrector focal surface, identification of the main scattering sources, and a description of mitigation strategies to remove the sources.

  8. Molecular architecture of DesI: a key enzyme in the biosynthesis of desosamine.

    PubMed

    Burgie, E Sethe; Holden, Hazel M

    2007-08-07

    Desosamine is a 3-(dimethylamino)-3,4,6-trideoxyhexose found, for example, in such macrolide antibiotics as erthyromycin, azithromycin, and clarithromycin. The efficacies of these macrolide antibiotics are markedly reduced in the absence of desosamine. In the bacterium Streptomyces venezuelae, six enzymes are required for the production of dTDP-desosamine. The focus of this X-ray crystallographic analysis is the third enzyme in the pathway, a PLP-dependent aminotransferase referred to as DesI. The structure of DesI was solved in complex with its product, dTDP-4-amino-4,6-dideoxyglucose, to a nominal resolution of 2.1 A. Each subunit of the dimeric enzyme contains 12 alpha-helices and 14 beta-strands. Three cis-peptides are observed in each subunit, Phe 330, Pro 332, and Pro 339. The two active sites of the enzyme are located in clefts at the subunit/subunit interface. Electron density corresponding to the bound product clearly demonstrates a covalent bond between the amino group of the product and C-4' of the PLP cofactor. Interestingly, there are no hydrogen-bonding interactions between the protein and the dideoxyglucosyl group of the product (within 3.2 A). The only other sugar-modifying aminotransferase whose structure is known in the presence of product is PseC from Helicobacter pylori. This enzyme, as opposed to DesI, catalyzes amino transfer to the axial position of the sugar. A superposition of the two active sites for these proteins reveals that the major differences in ligand binding occur in the orientations of the deoxyglucosyl and phosphoryl groups. Indeed, the nearly 180 degrees difference in hexose orientation explains the equatorial versus axial amino transfer exhibited by DesI and PseC, respectively.

  9. DESI-MS/MS of Chemical Warfare Agents and Related Compounds

    NASA Astrophysics Data System (ADS)

    D'Agostino, Paul A.

    Solid phase microextraction (SPME) fibers were used to headspace ­sample chemical warfare agents and their hydrolysis products from glass vials and glass vials containing spiked media, including Dacron swabs, office carpet, paper and fabric. The interface of the Z-spray source was modified to permit safe introduction of the SPME fibers for desorption electrospray ionization mass spectrometric (DESI-MS) analysis. A "dip and shoot" method was also developed for the rapid sampling and DESI-MS analysis of chemical warfare agents and their hydrolysis products in liquid samples. Sampling was performed by simply dipping fused silica, stainless steel or SPME tips into the organic or aqueous samples. Replicate analyses were completed within several minutes under ambient conditions with no sample pre-treatment, resulting in a significant increase in sample throughput. The developed sample handling and analysis method was applied to the determination of chemical warfare agent content in samples containing unknown chemical and/or biological warfare agents. Ottawa sand was spiked with sulfur mustard, extracted with water and autoclaved to ensure sterility. Sulfur mustard was completely hydrolysed during the extraction/autoclave step and thiodiglycol was identified by DESI-MS, with analyses generally being completed within 1 min using the "dip and shoot" method.

  10. An advanced draft genome assembly of a desi type chickpea (Cicer arietinum L.).

    PubMed

    Parween, Sabiha; Nawaz, Kashif; Roy, Riti; Pole, Anil K; Venkata Suresh, B; Misra, Gopal; Jain, Mukesh; Yadav, Gitanjali; Parida, Swarup K; Tyagi, Akhilesh K; Bhatia, Sabhyata; Chattopadhyay, Debasis

    2015-08-11

    Chickpea (Cicer arietinum L.) is an important pulse legume crop. We previously reported a draft genome assembly of the desi chickpea cultivar ICC 4958. Here we report an advanced version of the ICC 4958 genome assembly (version 2.0) generated using additional sequence data and an improved genetic map. This resulted in 2.7-fold increase in the length of the pseudomolecules and substantial reduction of sequence gaps. The genome assembly covered more than 94% of the estimated gene space and predicted the presence of 30,257 protein-coding genes including 2230 and 133 genes encoding potential transcription factors (TF) and resistance gene homologs, respectively. Gene expression analysis identified several TF and chickpea-specific genes with tissue-specific expression and displayed functional diversification of the paralogous genes. Pairwise comparison of pseudomolecules in the desi (ICC 4958) and the earlier reported kabuli (CDC Frontier) chickpea assemblies showed an extensive local collinearity with incongruity in the placement of large sequence blocks along the linkage groups, apparently due to use of different genetic maps. Single nucleotide polymorphism (SNP)-based mining of intra-specific polymorphism identified more than four thousand SNPs differentiating a desi group and a kabuli group of chickpea genotypes.

  11. An advanced draft genome assembly of a desi type chickpea (Cicer arietinum L.)

    PubMed Central

    Parween, Sabiha; Nawaz, Kashif; Roy, Riti; Pole, Anil K.; Venkata Suresh, B.; Misra, Gopal; Jain, Mukesh; Yadav, Gitanjali; Parida, Swarup K.; Tyagi, Akhilesh K.; Bhatia, Sabhyata; Chattopadhyay, Debasis

    2015-01-01

    Chickpea (Cicer arietinum L.) is an important pulse legume crop. We previously reported a draft genome assembly of the desi chickpea cultivar ICC 4958. Here we report an advanced version of the ICC 4958 genome assembly (version 2.0) generated using additional sequence data and an improved genetic map. This resulted in 2.7-fold increase in the length of the pseudomolecules and substantial reduction of sequence gaps. The genome assembly covered more than 94% of the estimated gene space and predicted the presence of 30,257 protein-coding genes including 2230 and 133 genes encoding potential transcription factors (TF) and resistance gene homologs, respectively. Gene expression analysis identified several TF and chickpea-specific genes with tissue-specific expression and displayed functional diversification of the paralogous genes. Pairwise comparison of pseudomolecules in the desi (ICC 4958) and the earlier reported kabuli (CDC Frontier) chickpea assemblies showed an extensive local collinearity with incongruity in the placement of large sequence blocks along the linkage groups, apparently due to use of different genetic maps. Single nucleotide polymorphism (SNP)-based mining of intra-specific polymorphism identified more than four thousand SNPs differentiating a desi group and a kabuli group of chickpea genotypes. PMID:26259924

  12. The DESI Experiment Part I: Science,Targeting, and Survey Design

    SciTech Connect

    Aghamousa, Amir; et al.

    2016-10-31

    DESI (Dark Energy Spectroscopic Instrument) is a Stage IV ground-based dark energy experiment that will study baryon acoustic oscillations (BAO) and the growth of structure through redshift-space distortions with a wide-area galaxy and quasar redshift survey. To trace the underlying dark matter distribution, spectroscopic targets will be selected in four classes from imaging data. We will measure luminous red galaxies up to $z=1.0$. To probe the Universe out to even higher redshift, DESI will target bright [O II] emission line galaxies up to $z=1.7$. Quasars will be targeted both as direct tracers of the underlying dark matter distribution and, at higher redshifts ($ 2.1 < z < 3.5$), for the Ly-$\\alpha$ forest absorption features in their spectra, which will be used to trace the distribution of neutral hydrogen. When moonlight prevents efficient observations of the faint targets of the baseline survey, DESI will conduct a magnitude-limited Bright Galaxy Survey comprising approximately 10 million galaxies with a median $z\\approx 0.2$. In total, more than 30 million galaxy and quasar redshifts will be obtained to measure the BAO feature and determine the matter power spectrum, including redshift space distortions.

  13. Microtomography using synchrotron radiation at DESY: current status and future developments

    NASA Astrophysics Data System (ADS)

    Beckmann, Felix; Donath, Tilman; Dose, Thomas; Lippmann, Thomas; Martins, Rene V.; Metge, Joachim; Schreyer, Andreas

    2004-10-01

    The X-ray microtomography system which is operated at the Hamburger Synchrotronstrahlungslabor HASYLAB of the Deutsches Elektronen-Synchrotron DESY in Hamburg, Germany, is presented. At the DORIS storage ring synchrotron radiation at the wiggler beamlines BW2, W2, and BW5 was used to run the microtomography apparatus as a user experiment. The development of tomography scanning techniques to investigate samples which are larger than the field of view of the X-ray detector is demonstrated for dental implants using the photon energy of 90 keV at the high energy beamline BW5. In cooperation with DESY the GKSS Research Center is setting up the high energy beamline HARWI-2 at the DORIS storage ring of DESY. This beamline will allow for tomography experiments using monochromatic X-rays from 20 to 200 keV with a beam size of 70×10 mm2. Furthermore the GKSS is operating a neutron radiography facility GENRA at the research reactor Geesthacht FRG, Geesthacht, Germany. It is intended to extend this facility by a tomography station. The combination of synchrotron radiation based microtomography with neutron tomography will allow for the development of new techniques to give new insight in the 3-dim. behavior of samples especially in materials science.

  14. Detection of saccharides by reactive desorption electrospray ionization (DESI) using modified phenylboronic acids

    NASA Astrophysics Data System (ADS)

    Zhang, Yun; Chen, Hao

    2010-01-01

    We have reported previously a method for the detection of sugars via in-situ derivatization with phenylboronic acid PhB(OH)2 using reactive desorption electrospray ionization (DESI, Chen et al., Chem. Commun. (2006) 597-599). The present study describes an improved method that employs modified phenylboronic acids including 3-nitrophenylboronic acid and N-methyl-4-pyridineboronic acid iodide. In contrast to using PhB(OH)2, enhanced sensitivity of using 3-nitrophenylboronic acid was observed due to the stabilization of the resulting boronate ester anion by the electron-withdrawing nitro group and the limit of detections (LODs) for glucose in water using 3-nitrophenylbornic acid and phenylboronic acid were determined to be 0.11 mM and 0.40 mM, respectively. In the case of N-methyl-4-pyridineboronic acid iodide, the corresponding LOD is 6.9 [mu]M and the higher sensitivity obtained is attributed to the efficient ionization of both the reactive DESI reagent and reaction product since the precursor acid with a quaternary ammonium group is pre-charged. In this case, additional important features are found: (i) unlike using phenylboronic acid or 3-nitrophenylbornic acid, the experiment, performed in the positive ion mode, is applicable to neutral and acidic saccharide solutions, facilitating the analysis of biological fluids without the need to adjust pH; (ii) simply by changing the spray solvent from water to acetonitrile, the method can be used for direct glucose analyses of both urine and serum samples via online desalting, due to the low solubility of salts of these biofluids in the sprayed organic solvent; (iii) in comparison with other sugar derivatizing reagents such as the Girard's reagent T, the N-methyl-4-pyridineboronic acid iodide shows higher reactivity in the reactive DESI; and (iv) the ions of saccharide DESI reaction products undergo extensive ring or glycosidic bond cleavage upon CID, a feature that might be useful in the structure elucidation of

  15. Differential response of kabuli and desi chickpea genotypes toward inoculation with PGPR in different soils

    PubMed Central

    Imran, Asma; Mirza, Muhammad S.; Shah, Tariq M.; Malik, Kauser A.; Hafeez, Fauzia Y.

    2015-01-01

    Pakistan is among top three chickpea producing countries but the crop is usually grown on marginal lands without irrigation and fertilizer application which significantly hampers its yield. Soil fertility and inoculation with beneficial rhizobacteria play a key role in nodulation and yield of legumes. Four kabuli and six desi chickpea genotypes were, therefore, evaluated for inoculation response with IAA-producing Ochrobactrum ciceri Ca-34T and nitrogen fixing Mesorhizobium ciceri TAL-1148 in single and co-inoculation in two soils. The soil type 1 was previously unplanted marginal soil having low organic matter, P and N contents compared to soil type 2 which was a fertile routinely legume-cultivated soil. The effect of soil fertility status was pronounced and fertile soil on average, produced 31% more nodules, 62% more biomass and 111% grain yield than marginal soil. Inoculation either with O. ciceri alone or its co-inoculation with M. ciceri produced on average higher nodules (42%), biomass (31%), grains yield (64%) and harvest index (72%) in both chickpea genotypes over non-inoculated controls in both soils. Soil 1 showed maximum relative effectiveness of Ca-34T inoculation for kabuli genotypes while soil 2 showed for desi genotypes except B8/02. Desi genotype B8/02 in soil type 1 and Pb-2008 in soil type 2 showed significant yield increase as compared to respective un-inoculated controls. Across bacterial inoculation treatments, grain yield was positively correlated to growth and yield contributing parameters (r = 0.294* to 0.838*** for desi and r = 0.388* to 0.857** for kabuli). PCA and CAT-PCA analyses clearly showed a site-specific response of genotype x bacterial inoculation. Furthermore, the inoculated bacterial strains were able to persist in the rhizosphere showing colonization on root and within nodules. Present study shows that plant growth promoting rhizobacteria (PGPR) inoculation should be integrated with national chickpea breading program in

  16. Optical fiber termination method for the Dark Energy Spectroscopic Instrument (DESI)

    NASA Astrophysics Data System (ADS)

    Poppett, Claire; Edelstein, Jerry; Ishikawa, Yuzo; Meghrouni-Brown, Zakios; Fagrelius, Parker

    2016-08-01

    The Dark Energy Spectroscopic Instrument (DESI) is under construction to measure the expansion history of the Universe using the Baryon Acoustic Oscillation technique. The spectra of 40 million galaxies over 14000 sq deg will be measured during the life of the experiment. A new prime focus corrector for the KPNO Mayall telescope will deliver light to 5000 fiber optic positioners. The fibers in turn feed ten broad-band spectrographs. We will describe the method we use to optically terminate the fibers which offers many advantages over methods that have been used in the past.

  17. Analysis of DESY-Flash LLRF Measurements for the ILC Heavy Beam Loading Test

    SciTech Connect

    Cancelo, Gustavo; Chase, Brian; Davidsaver, Michael; Carwardine, J.; Simrock, Stefan; Ayvazyan, Valeri; Grecki, Mariusz; Matsumoto, Toshihiro; Michizono, Shinichiro; /KEK, Tsukuba

    2009-06-01

    In September 2008 the DESY-FLASH accelerator was run with up to 550, 3 nano-coulomb bunches at 5 Hz repetition rate. This test is part of a longer-term study aimed at validating ILC parameters by operation as close as possible to ILC beam currents and RF gradients. The present paper reports on the analysis that has been done in order to understand the RF control system performance during this test. Actual klystron power requirements and beam stability are evaluated with heavy beam loading conditions. Results include suggested improvements for upcoming tests in 2009.

  18. Blotting Assisted by Heating and Solvent Extraction for DESI-MS Imaging

    NASA Astrophysics Data System (ADS)

    Cabral, Elaine C.; Mirabelli, Mario F.; Perez, Consuelo J.; Ifa, Demian R.

    2013-06-01

    Imprints of potato sprout ( Solanum tuberosum L.), gingko leaves (Gingko biloba L. ) and strawberries (Fragaria x ananassa Duch. ) were successfully imaged by desorption electrospray ionization mass spectrometry (DESI-MS) on TLC plates through blotting assisted by heating and/or solvent extraction. Ion images showing the distribution of significant compounds such as glycoalkaloid toxins in potato sprout, ginkgolic acids and flavonoids in ginkgo leaves, and sugars and anthocyanidin in strawberry were obtained. Practical implications of this work include analysis of a wide range of irregular or soft materials by different imprinting conditions without requiring the addition of matrices or use of specific kinds of surfaces.

  19. Das wissenschaftliche Handbuch

    NASA Astrophysics Data System (ADS)

    Luckenbach, Reiner; Sunkel, Josef

    1981-02-01

    The 100th anniversary of Beilstein's Handbook of Organic Chemistry, founded in 1881, merits a brief description of the principal concepts and goals of the literary genre “scientific handbook” in general. Systematic arrangement, critical data and fact evaluation, thoroughness and reliability are among these goals, thus providing the handbook user with a concise compilation of carefully checked and cross-referenced information in his particular field of interest.

  20. Analysis of metabolic changes in plant pathosystems by imprint imaging DESI-MS.

    PubMed

    Tata, Alessandra; Perez, Consuelo J; Hamid, Tanam S; Bayfield, Mark A; Ifa, Demian R

    2015-04-01

    The response of plants to microbial pathogens is based on the production of secondary metabolites. The complexity of plant-pathogen interactions makes their understanding a challenging task for metabolomic studies requiring powerful analytical approaches. In this paper, the ability of ambient mass spectrometry to provide a snapshot of plant metabolic response to pathogen invasion was tested. The fluctuations of glycoalkaloids present in sprouted potatoes infected by the phytopathogen Pythium ultimum were monitored by imprint imaging desorption electrospray ionization mass spectrometry (DESI-MS). After 8 d from the inoculation, a decrease of the relative abundance of potato glycoalkaloids α-solanine (m/z 706) and α-chaconine (m/z 722) was observed, whereas the relative intensity of solanidine (m/z 398), solasodenone (m/z 412), solanaviol (m/z 430), solasodiene (m/z 396), solaspiralidine (m/z 428), γ-solanine/γ-chaconine (m/z 560) , β-solanine (m/z 706), and β-chaconine (m/z 722) increased. The progression of the disease, expressed by the development of brown necrotic lesions on the potato, led to the further decrease of all the glycoalkaloid metabolites. Therefore, the applicability of imprint imaging DESI-MS in studying the plant metabolic changes in a simple pathosystem was demonstrated with minimal sample preparation.

  1. Analysis of Metabolic Changes in Plant Pathosystems by Imprint Imaging DESI-MS

    NASA Astrophysics Data System (ADS)

    Tata, Alessandra; Perez, Consuelo J.; Hamid, Tanam S.; Bayfield, Mark A.; Ifa, Demian R.

    2015-04-01

    The response of plants to microbial pathogens is based on the production of secondary metabolites. The complexity of plant-pathogen interactions makes their understanding a challenging task for metabolomic studies requiring powerful analytical approaches. In this paper, the ability of ambient mass spectrometry to provide a snapshot of plant metabolic response to pathogen invasion was tested. The fluctuations of glycoalkaloids present in sprouted potatoes infected by the phytopathogen Pythium ultimum were monitored by imprint imaging desorption electrospray ionization mass spectrometry (DESI-MS). After 8 d from the inoculation, a decrease of the relative abundance of potato glycoalkaloids α-solanine ( m/z 706) and α-chaconine ( m/z 722) was observed, whereas the relative intensity of solanidine ( m/z 398), solasodenone ( m/z 412), solanaviol ( m/z 430), solasodiene ( m/z 396), solaspiralidine ( m/z 428), γ-solanine/γ-chaconine ( m/z 560) , β-solanine ( m/z 706), and β-chaconine ( m/z 722) increased. The progression of the disease, expressed by the development of brown necrotic lesions on the potato, led to the further decrease of all the glycoalkaloid metabolites. Therefore, the applicability of imprint imaging DESI-MS in studying the plant metabolic changes in a simple pathosystem was demonstrated with minimal sample preparation.

  2. SINBAD-The accelerator R&D facility under construction at DESY

    NASA Astrophysics Data System (ADS)

    Dorda, U.; Assmann, R.; Brinkmann, R.; Flöttmann, K.; Hartl, I.; Hüning, M.; Kärtner, F.; Fallahi, A.; Marchetti, B.; Nie, Y.; Osterhoff, J.; Schlarb, H.; Zhu, J.; Maier, A. R.

    2016-09-01

    The SINBAD facility (Short INnovative Bunches and Accelerators at DESY) is a long-term dedicated accelerator research and development facility currently under construction at DESY. It will be located in the premises of the old DORIS accelerator complex and host multiple independent experiments cost-effectively accessing the same central infrastructure like a central high power laser. With the removal of the old DORIS accelerator being completed, the refurbishment of the technical infrastructure is currently starting up. The presently ongoing conversion of the area into the SINBAD facility and the currently foreseen layout is described. The first experiment will use a compact S-band linac for the production of ultra-short bunches at hundred MeV. Once established, one of the main usages will be to externally inject electrons into a laser-driven plasma wakefield accelerator to boost the energy to GeV-level while maintaining a usable beam quality, ultimately aiming to drive an FEL. The second experiment already under planning is the setup of an attosecond radiation source with advanced technology. Further usage of the available space and infrastructure is revised and national and international collaborations are being established.

  3. DESI and other Dark Energy experiments in the era of neutrino mass measurements

    SciTech Connect

    Font-Ribera, Andreu; McDonald, Patrick; Mostek, Nick; Reid, Beth A.; Seo, Hee-Jong; Slosar, Anže E-mail: PVMcDonald@lbl.gov E-mail: BAReid@lbl.gov E-mail: anze@bnl.gov

    2014-05-01

    We present Fisher matrix projections for future cosmological parameter measurements, including neutrino masses, Dark Energy, curvature, modified gravity, the inflationary perturbation spectrum, non-Gaussianity, and dark radiation. We focus on DESI and generally redshift surveys (BOSS, HETDEX, eBOSS, Euclid, and WFIRST), but also include CMB (Planck) and weak gravitational lensing (DES and LSST) constraints. The goal is to present a consistent set of projections, for concrete experiments, which are otherwise scattered throughout many papers and proposals. We include neutrino mass as a free parameter in most projections, as it will inevitably be relevant — DESI and other experiments can measure the sum of neutrino masses to ∼ 0.02 eV or better, while the minimum possible sum is ∼ 0.06 eV. We note that constraints on Dark Energy are significantly degraded by the presence of neutrino mass uncertainty, especially when using galaxy clustering only as a probe of the BAO distance scale (because this introduces additional uncertainty in the background evolution after the CMB epoch). Using broadband galaxy power becomes relatively more powerful, and bigger gains are achieved by combining lensing survey constraints with redshift survey constraints. We do not try to be especially innovative, e.g., with complex treatments of potential systematic errors — these projections are intended as a straightforward baseline for comparison to more detailed analyses.

  4. The National Analysis Facility at DESY - status and use cases by the participating experiments

    NASA Astrophysics Data System (ADS)

    Aplin, S.; Ehrenfeld, W.; Haupt, A.; Kemp, Y.; Langenbruch, C.; Leffhalm, K.; Lucaci-Timoce, A.; Stadie, H.

    2011-12-01

    The German National Analysis Facility (NAF) was set up at DESY, starting end of 2007 in the context of the Helmholtz Alliance "Physics at the Terascale". The NAF complements the DESY and the German Grid resources, and hence offers users from the German HEP institutes the best possible environment for data analysis. In the first part, the key aspects and components of the NAF are briefly presented with an emphasis on recent improvements. In the second part, the use cases of the three participating LHC experiments, ATLAS, CMS and LHCb, will be presented. Differences and commonalities in the usage of the NAF will be shown. Special emphasis will be placed on the usage of PROOF, whose usage on the NAF has been pioneered by CMS. It is now adapted by ATLAS. The third part will concentrate on how the NAF was used for detector optimisation studies in the preparation of one of the ILC Lol's (ILD 2009), as well as how CALICE uses the NAF for the analysis of their data taken in several test beam experiments performed for detector R & D. Finally, future developments of the NAF are presented.

  5. Advances in Large Grain/Single Crystal SC Resonators at DESY

    SciTech Connect

    W. Singer; A. Brinkmann; A. Ermakov; J. Iversen; G. Kreps; A. Matheisen; D. Proch; D. Reschke; X. Singer; M. Spiwek; H. We; P. Kneisel; M. Pekeler

    2007-08-01

    The main aim of the DESY large grain R&D program is to check whether this option is reasonable to apply for fabrication of ca. 1'000 XFEL cavities. Two aspects are being pursued. On one hand the basic material investigation, on the other hand the material availability, fabrication and preparation procedure. Several single cell large grain cavities of TESLA shape have been fabricated and tested. The best accelerating gradients of 41 MV/m was measured on electropolished cavity. First large grain nine-cell cavities worldwide have been produced under contract of DESY with ACCEL Instruments Co. All three cavities fulfil the XFEL specification already in first RF test after only BCP (Buffered Chemical Polishing) treatment and 800 degrees C annealing. Accelerating gradient of 27 - 29 MV/m was reached. A fabrication method of single crystal cavity of ILC like shape was proposed. A single cell single crystal cavity was build at the company ACCEL. Accelerating gradient of 37.5 MV/m reached after only 112 microns BCP and in situ baking 120 degrees C for 6 hrs with the quality factor higher as 2x1010. The developed method can be extended on fabrication of multi cell single crystal cavities.

  6. HPTLC/DESI-MS Imaging of Tryptic Protein Digests Separated in Two Dimensions

    SciTech Connect

    Pasilis, Sofie P; Kertesz, Vilmos; Van Berkel, Gary J; Schulz, Michael; Schorcht, Susanne

    2008-01-01

    Desorption electrospray ionization mass spectrometry (DESI-MS) was demonstrated as a method to detect and identify peptides from two-dimensional separations of cytochrome c and myoglobin tryptic digests on ProteoChrom HPTLC Cellulose sheets. Data-dependent tandem mass spectra were acquired during lane scans across the TLC plates. Peptides and the corresponding proteins were identified using a protein database search software. Two-dimensional distributions of identified peptides were mapped for each separated protein digest. Sequence coverages for cytochrome c and myoglobin were 81% and 74%, respectively. These compared well to those determined using the more standard HPLC/ESI-MS/MS approach (89% and 84%, respectively). Preliminary results show that use of more sensitive instrumentation has the potential for improved detection of peptides with low Rf values and improvement in sequence coverage. However, less multiple charging and more sodiation were seen in HPTLC/DESI-MS spectra relative to HPLC/ESI-MS spectra, which can affect peptide identification by MS/MS. Methods to increase multiple charging and reduce the extent of sodiation are currently under investigation.

  7. Effect of salinity on growth and yield of Desi and Kabuli chickpea cultivars.

    PubMed

    Sohrabi, Yousef; Heidari, Gholamreza; Esmailpoor, Behrooz

    2008-02-15

    To evaluate the effects of different level of Na salinity (0, 3, 6 and 9 dS m(-1)) on growth, yield and yield component of Kabuli (Hashem and Jam) and Desi (Kaka and Pirooz) chickpea cultivars a factorial experiment based on randomized complete block design with four replications was carried out in Research Greenhouse of Mokrian Agricultural Extension Center near Mahabad, Iran at 2006. Seeds of four chickpea cultivars were grown under 0, 3, 6 and 9 dS m(-1) levels of salinity until maturity. Salinity reduced the plant growth, flower, pod and seed number and seed weight. As increase in salinity, the undesirable effect of Na+ was more pronounced and reached the highest value at 9 dS m(-1) in all cultivars. Four chickpea cultivar have different responses to salinity and the Kabuli cultivars seemed to have a greater capacity for salt tolerance compared to Desi cultivars. Hahshem cultivar has the highest salinity tolerance among all cultivars.

  8. DESI and other Dark Energy experiments in the era of neutrino mass measurements

    SciTech Connect

    Font-Ribera, Andreu; McDonald, Patrick; Mostek, Nick; Reid, Beth A.; Seo, Hee-Jong; Slosar, Anže

    2014-05-19

    Here we present Fisher matrix projections for future cosmological parameter measurements, including neutrino masses, Dark Energy, curvature, modified gravity, the inflationary perturbation spectrum, non-Gaussianity, and dark radiation. We focus on DESI and generally redshift surveys (BOSS, HETDEX, eBOSS, Euclid, and WFIRST), but also include CMB (Planck) and weak gravitational lensing (DES and LSST) constraints. The goal is to present a consistent set of projections, for concrete experiments, which are otherwise scattered throughout many papers and proposals. We include neutrino mass as a free parameter in most projections, as it will inevitably be relevant $-$ DESI and other experiments can measure the sum of neutrino masses to ~ 0.02 eV or better, while the minimum possible sum is 0.06 eV. We note that constraints on Dark Energy are significantly degraded by the presence of neutrino mass uncertainty, especially when using galaxy clustering only as a probe of the BAO distance scale (because this introduces additional uncertainty in the background evolution after the CMB epoch). Using broadband galaxy power becomes relatively more powerful, and bigger gains are achieved by combining lensing survey constraints with redshift survey constraints. Finally, we do not try to be especially innovative, e.g., with complex treatments of potential systematic errors $-$ these projections are intended as a straightforward baseline for comparison to more detailed analyses.

  9. DESI and other Dark Energy experiments in the era of neutrino mass measurements

    DOE PAGES

    Font-Ribera, Andreu; McDonald, Patrick; Mostek, Nick; ...

    2014-05-19

    Here we present Fisher matrix projections for future cosmological parameter measurements, including neutrino masses, Dark Energy, curvature, modified gravity, the inflationary perturbation spectrum, non-Gaussianity, and dark radiation. We focus on DESI and generally redshift surveys (BOSS, HETDEX, eBOSS, Euclid, and WFIRST), but also include CMB (Planck) and weak gravitational lensing (DES and LSST) constraints. The goal is to present a consistent set of projections, for concrete experiments, which are otherwise scattered throughout many papers and proposals. We include neutrino mass as a free parameter in most projections, as it will inevitably be relevant $-$ DESI and other experiments can measuremore » the sum of neutrino masses to ~ 0.02 eV or better, while the minimum possible sum is 0.06 eV. We note that constraints on Dark Energy are significantly degraded by the presence of neutrino mass uncertainty, especially when using galaxy clustering only as a probe of the BAO distance scale (because this introduces additional uncertainty in the background evolution after the CMB epoch). Using broadband galaxy power becomes relatively more powerful, and bigger gains are achieved by combining lensing survey constraints with redshift survey constraints. Finally, we do not try to be especially innovative, e.g., with complex treatments of potential systematic errors $-$ these projections are intended as a straightforward baseline for comparison to more detailed analyses.« less

  10. A chromosomal genomics approach to assess and validate the desi and kabuli draft chickpea genome assemblies.

    PubMed

    Ruperao, Pradeep; Chan, Chon-Kit Kenneth; Azam, Sarwar; Karafiátová, Miroslava; Hayashi, Satomi; Cížková, Jana; Saxena, Rachit K; Simková, Hana; Song, Chi; Vrána, Jan; Chitikineni, Annapurna; Visendi, Paul; Gaur, Pooran M; Millán, Teresa; Singh, Karam B; Taran, Bunyamin; Wang, Jun; Batley, Jacqueline; Doležel, Jaroslav; Varshney, Rajeev K; Edwards, David

    2014-08-01

    With the expansion of next-generation sequencing technology and advanced bioinformatics, there has been a rapid growth of genome sequencing projects. However, while this technology enables the rapid and cost-effective assembly of draft genomes, the quality of these assemblies usually falls short of gold standard genome assemblies produced using the more traditional BAC by BAC and Sanger sequencing approaches. Assembly validation is often performed by the physical anchoring of genetically mapped markers, but this is prone to errors and the resolution is usually low, especially towards centromeric regions where recombination is limited. New approaches are required to validate reference genome assemblies. The ability to isolate individual chromosomes combined with next-generation sequencing permits the validation of genome assemblies at the chromosome level. We demonstrate this approach by the assessment of the recently published chickpea kabuli and desi genomes. While previous genetic analysis suggests that these genomes should be very similar, a comparison of their chromosome sizes and published assemblies highlights significant differences. Our chromosomal genomics analysis highlights short defined regions that appear to have been misassembled in the kabuli genome and identifies large-scale misassembly in the draft desi genome. The integration of chromosomal genomics tools within genome sequencing projects has the potential to significantly improve the construction and validation of genome assemblies. The approach could be applied both for new genome assemblies as well as published assemblies, and complements currently applied genome assembly strategies. © 2014 Society for Experimental Biology, Association of Applied Biologists and John Wiley & Sons Ltd.

  11. Desorption electrospray ionization mass spectrometry (DESI-MS) applied to the speciation of arsenic compounds from fern leaves.

    PubMed

    de Abreu, Lívia Botelho; Augusti, Rodinei; Schmidt, Lucas; Dressler, Valderi Luiz; Flores, Erico Marlon de Moraes; Nascentes, Clésia Cristina

    2013-09-01

    The different chemical forms of arsenic compounds, including inorganic and organic species, present distinct environmental impacts and toxicities. Desorption electrospray ionization mass spectrometry (DESI-MS) is an excellent technique for in situ analysis, as it operates under atmospheric pressure and room temperature and is conducted with no/minimal sample pretreatment. Aimed at expanding its scope, DESI-MS is applied herein for the quick and reliable detection of inorganic (arsenate--As(V): AsO4(3-) and arsenite--As(III): AsO2(-)) and organic (dimethylarsinic acid--DMA: (CH3)2AsO(OH) and disodium methyl arsonate hexahydrate: CH3AsO3·2Na·6H2O) arsenic compounds in fern leaves. Operational conditions of DESI-MS were optimized with DMA standard deposited on paper surfaces to improve ionization efficiency and detection limits. Mass spectra data for all arsenic species were acquired in both the positive and negative ion modes. The positive ion mode was shown to be useful in detecting both the organic and inorganic arsenic compounds. The negative ion mode was shown only to be useful in detecting As(V) species. Moreover, MS/MS spectra were recorded to confirm the identity of each arsenic compound by the characteristic fragmentation profiles. Optimized conditions of DESI-MS were applied to the analysis of fern leaves. LC-ICP-MS was employed to confirm the results obtained by DESI-MS and to quantify the arsenic species in fern leaves. The results confirmed the applicability of DESI-MS in detecting arsenic compounds in complex matrices.

  12. Confirmation and 3D profiling of anabolic steroid esters in injection sites using imaging desorption electrospray ionisation (DESI) mass spectrometry.

    PubMed

    de Rijke, Eva; Hooijerink, Dick; Sterk, Saskia S; Nielen, Michel W F

    2013-01-01

    In this study, desorption electrospray ionisation (DESI) linear ion trap tandem mass spectrometry (MS(n)) was applied for the confirmation and three-dimensional profiling of anabolic steroid esters in an injection site of bovine muscle. The spatial resolution of the DESI-MS(n) was demonstrated by scanning hormone esters and marker ink lines drawn at various distances on a microscopic slide at set distances, using an x-scanner with manual y and z adjustment. Tissue slices of bovine muscle injected with a hormone cocktail were analysed. All anabolic steroid esters could be directly detected in the sample and confirmed on the basis of identification points awarded for selected MS/MS transitions according to the performance criteria given in Commission Decision 2002/657/EC. Moreover, the injection site could be mapped by two-dimensional and three-dimensional imaging MS, showing a horizontal and vertical distribution through the muscle tissue. This DESI approach offers potential for analysis of injection sites of steroid esters from illegally treated animals; moreover, direct analysis by ambient imaging DESI-MS still allows conventional extraction and analysis of the whole tissue for further confirmatory or contra-analysis afterwards.

  13. A Combined Desorption Ionization by Charge Exchange (DICE) and Desorption Electrospray Ionization (DESI) Source for Mass Spectrometry

    NASA Astrophysics Data System (ADS)

    Chan, Chang-Ching; Bolgar, Mark S.; Miller, Scott A.; Attygalle, Athula B.

    2011-01-01

    A source that couples the desorption ionization by charge exchange (DICE) and desorption electrospray ionization (DESI) techniques together was demonstrated to broaden the range of compounds that can be analyzed in a single mass spectrometric experiment under ambient conditions. A tee union was used to mix the spray reagents into a partially immiscible blend before this mixture was passed through a conventional electrospray (ES) probe capillary. Using this technique, compounds that are ionized more efficiently by the DICE method and those that are ionized better with the DESI procedure could be analyzed simultaneously. For example, hydroquinone, which is not detected when subjected to DESI-MS in the positive-ion generation mode, or the sodium adduct of guaifenesin, which is not detected when examined by DICE-MS, could both be detected in one experiment when the two techniques were combined. The combined technique was able to generate the molecular ion, proton and metal adduct from the same compound. When coupled to a tandem mass spectrometer, the combined source enabled the generation of product ion spectra from the molecular ion and the [M + H]+ or [M + metal]+ ions of the same compound without the need to physically change the source from DICE to DESI. The ability to record CID spectra of both the molecular ion and adduct ions in a single mass spectrometric experiment adds a new dimension to the array of mass spectrometric methods available for structural studies.

  14. Operation of the Free-Electron Laser at DESY and First Scientific Experiments

    NASA Astrophysics Data System (ADS)

    Feldhaus, Josef

    2007-01-01

    The free-electron laser at DESY in Hamburg (FLASH) is the first free-electron laser built for the vacuum-ultraviolet (VUV) and soft X-ray region. It started user operation in summer 2005 and has been operated routinely for scientific experiments at 32 nm wavelength providing up to 150 pulses per second with GW peak power and a pulse duration between 20 and 50 fs. Recently also shorter wavelengths at 25.5 nm and ˜13 nm have been used for experiments. The FEL beam can be switched between four experimental stations by movable mirrors. A synchronised optical laser system is available for pump-probe experiments. Diagnostics has been implemented to monitor the pulse energy and its timing with respect to the optical laser. The current status of the facility is reviewed and examples of first user experiments are presented.

  15. Mitigating the impact of the DESI fiber assignment on galaxy clustering

    NASA Astrophysics Data System (ADS)

    Burden, Angela; Padmanabhan, Nikhil; Cahn, Robert N.; White, Martin J.; Samushia, Lado

    2017-03-01

    We present a simple strategy to mitigate the impact of an incomplete spectroscopic redshift galaxy sample as a result of fiber assignment and survey tiling. The method has been designed for the Dark Energy Spectroscopic Instrument (DESI) galaxy survey but may have applications beyond this. We propose a modification to the usual correlation function that nulls the almost purely angular modes affected by survey incompleteness due to fiber assignment. Predictions of this modified statistic can be calculated given a model of the two point correlation function. The new statistic can be computed with a slight modification to the data catalogues input to the standard correlation function code and does not incur any additional computational time. Finally we show that the spherically averaged baryon acoustic oscillation signal is not biased by the new statistic.

  16. Resolution Studies at Beam Position Monitors at the FLASH Facility at DESY

    SciTech Connect

    Baboi, N.; Lund-Nielsen, J.; Noelle, D.; Traber, T.; Kruse, J.; Riesch, W.; Wendt, M.

    2006-11-20

    More than 60 beam position monitors (BPM) are installed along about 350m of beamline of the Free Electron LASer in Hamburg (FLASH) at DESY. The room-temperature part of the accelerator is equipped mainly with stripline position monitors. In the accelerating cryo-modules there are cavity and re-entrant cavity BPMs, which will not be discussed here. In the undulator part of the machine button BPMs are used. This area requires a single bunch resolution of 10{mu}m. The electronics is based on the AM/PM normalization principle and is externally triggered. Single-bunch position is measured. This paper presents the methods used to determine the resolution of the BPMs. The results based on correlations between different BPMs along the machine are compared to noise measurements in the RF lab. The performance and difficulties with the BPM design and the current electronics as well as its development are discussed.

  17. Signatures of heavy Majorana neutrinos and DESY HERA's isolated lepton events

    NASA Astrophysics Data System (ADS)

    Rodejohann, W.; Zuber, K.

    2000-11-01

    The graph of neutrinoless double beta decay is applied to DESY HERA data and generalized to final states with any two charged leptons. Considered is the case in which one of the two escapes typical identification criteria and the case when a produced tau decays hadronically. Both possibilities give one isolated lepton with high transverse momentum, hadronic activity, and an imbalance in transverse momentum. We examine the kinematical properties of these events and compare them with the high pT isolated leptons reported by the H1 Collaboration. Their positive charged muon events can be explained by the ``double beta'' process and we discuss the possibilities for the precise determination which original final state produced the single isolated lepton. To confirm our hypothesis one should search in the data for high pseudorapidity and/or low pT leptons or for additional separated jets.

  18. Hard diffraction at DESY HERA and the gluonic content of the Pomeron

    SciTech Connect

    Capella, A.; Kaidalov, A.; Merino, C.; Pertermann, D.; Tran Thanh Van, J.

    1996-03-01

    We show that the previously introduced CKMT model, based on conventional Regge theory, gives a good description of the data from DESY HERA on the structure function {ital F}{sup {ital D}}{sub 2} for large rapidity gap (diffractive) events. These data allow us not only to determine the valence and sea quark content of the Pomeron, but also, through their {ital Q}{sup 2} dependence, give us information on its gluonic content. Using DGLAP evolution, we find that the gluon distribution in the Pomeron is very hard and the gluons carry more momentum than the quarks. This indicates that the Pomeron, unlike ordinary hadrons, is a mostly gluonic object. With our definition of the Pomeron flux factor the total momentum carried by quarks and gluons turns out to be 0.3{endash}0.4, strongly violating the momentum sum rule. {copyright} {ital 1996 The American Physical Society.}

  19. Review of R&D at DESY on ingot niobium for accelerators

    NASA Astrophysics Data System (ADS)

    Navitski, Aliaksandr; Sekutowicz, Jacek; Singer, Waldemar; Singer, Xenia

    2015-12-01

    An R&D program at DESY exploring the potential of the production of 1.3 GHz TESLA shape cavities from large grain or ingot niobium material has been carried out as a feasibility study for using ingot niobium material for the European X-ray Free-Electron Laser project. The most important issues like feasibility of the fabrication of niobium discs from ingots, material properties, cavity fabrication, treatment, and finally the cryogenic radiofrequency (RF) performance of the cavity in the accelerator modules are presented and discussed. At least 25% higher intrinsic quality factor comparing to conventional fine-grain niobium and high accelerating gradient of up to 45 MV/m have been demonstrated during the cryogenic RF tests both in the vertical cryostats and in a completely assembled accelerating cryo-module.

  20. Review of R&D at DESY on ingot niobium for accelerators

    SciTech Connect

    Navitski, Aliaksandr Sekutowicz, Jacek Singer, Waldemar Singer, Xenia

    2015-12-04

    An R&D program at DESY exploring the potential of the production of 1.3 GHz TESLA shape cavities from large grain or ingot niobium material has been carried out as a feasibility study for using ingot niobium material for the European X-ray Free-Electron Laser project. The most important issues like feasibility of the fabrication of niobium discs from ingots, material properties, cavity fabrication, treatment, and finally the cryogenic radiofrequency (RF) performance of the cavity in the accelerator modules are presented and discussed. At least 25% higher intrinsic quality factor comparing to conventional fine-grain niobium and high accelerating gradient of up to 45 MV/m have been demonstrated during the cryogenic RF tests both in the vertical cryostats and in a completely assembled accelerating cryo-module.

  1. Development of capabilities for imaging mass spectrometry under ambient conditions with desorption electrospray ionization (DESI)

    NASA Astrophysics Data System (ADS)

    Ifa, Demian R.; Wiseman, Justin M.; Song, Qingyu; Cooks, R. Graham

    2007-01-01

    Aspects of the development of mass spectrometry over the past three decades are briefly reviewed and growth points in the subject are identified. Molecular imaging by mass spectrometry is one such growth area. The development of a capability for 2D chemical imaging of surfaces is described, based on the combination of a desorption electrospray ionization (DESI) ion source with an automated surface stage capable of x, y translational motion. The lateral resolution of this new system is found to be less than 200 microns, using a test ink pattern. Chemical imaging of surfaces is demonstrated using model examples of organic and biological systems: (i) imaging of a 2D pattern written in different colored inks on photographic paper and (ii) imaging of thin coronal sections of rat brain tissue fixed onto a glass microscope slide. In both cases, full mass spectra are recorded as a function of x,y-position on the surface. In the chemical imaging example, the distributions of the two different inks on the paper surface were mapped by tracking the abundance of the intact organic cation which characterizes each particular ink dye. In the tissue imaging example, distributions of specific lipids in coronal sections of rat brain tissue were followed from the abundance distributions in 2D space of the deprotonated lipid molecules recorded in the negative ion mass spectra. These latter distributions reveal distinct anatomical features of the rat brain. The results of these studies demonstrate the feasibility of performing surface imaging studies using DESI and show that at this stage of its development it has a lateral spatial resolution of a few hundred microns.

  2. Monitoring Toxic Ionic Liquids in Zebrafish (Danio rerio) with Desorption Electrospray Ionization Mass Spectrometry Imaging (DESI-MSI).

    PubMed

    Perez, Consuelo J; Tata, Alessandra; de Campos, Michel L; Peng, Chun; Ifa, Demian R

    2016-10-24

    Ambient mass spectrometry imaging has become an increasingly powerful technique for the direct analysis of biological tissues in the open environment with minimal sample preparation and fast analysis times. In this study, we introduce desorption electrospray ionization mass spectrometry imaging (DESI-MSI) as a novel, rapid, and sensitive approach to localize the accumulation of a mildly toxic ionic liquid (IL), AMMOENG 130 in zebrafish (Danio rerio). The work demonstrates that DESI-MSI has the potential to rapidly monitor the accumulation of IL pollutants in aquatic organisms. AMMOENG 130 is a quaternary ammonium-based IL reported to be broadly used as a surfactant in commercialized detergents. It is known to exhibit acute toxicity to zebrafish causing extensive damage to gill secondary lamellae and increasing membrane permeability. Zebrafish were exposed to the IL in a static 96-h exposure study in concentrations near the LC50 of 1.25, 2.5, and 5.0 mg/L. DESI-MS analysis of zebrafish gills demonstrated the appearance of a dealkylated AMMOENG 130 metabolite in the lowest concentration of exposure identified by a high resolution hybrid LTQ-Orbitrap mass spectrometer as the trimethylstearylammonium ion, [C21H46N](+). With DESI-MSI, the accumulation of AMMOENG 130 and its dealkylated metabolite in zebrafish tissue was found in the nervous and respiratory systems. AMMOENG 130 and the metabolite were capable of penetrating the blood brain barrier of the fish with significant accumulation in the brain. Hence, we report for the first time the simultaneous characterization, distribution, and metabolism of a toxic IL in whole body zebrafish analyzed by DESI-MSI. This ambient mass spectrometry imaging technique shows great promise for the direct analysis of biological tissues to qualitatively monitor foreign, toxic, and persistent compounds in aquatic organisms from the environment. Graphical Abstract ᅟ.

  3. Monitoring Toxic Ionic Liquids in Zebrafish (Danio rerio) with Desorption Electrospray Ionization Mass Spectrometry Imaging (DESI-MSI)

    NASA Astrophysics Data System (ADS)

    Perez, Consuelo J.; Tata, Alessandra; de Campos, Michel L.; Peng, Chun; Ifa, Demian R.

    2016-10-01

    Ambient mass spectrometry imaging has become an increasingly powerful technique for the direct analysis of biological tissues in the open environment with minimal sample preparation and fast analysis times. In this study, we introduce desorption electrospray ionization mass spectrometry imaging (DESI-MSI) as a novel, rapid, and sensitive approach to localize the accumulation of a mildly toxic ionic liquid (IL), AMMOENG 130 in zebrafish (Danio rerio). The work demonstrates that DESI-MSI has the potential to rapidly monitor the accumulation of IL pollutants in aquatic organisms. AMMOENG 130 is a quaternary ammonium-based IL reported to be broadly used as a surfactant in commercialized detergents. It is known to exhibit acute toxicity to zebrafish causing extensive damage to gill secondary lamellae and increasing membrane permeability. Zebrafish were exposed to the IL in a static 96-h exposure study in concentrations near the LC50 of 1.25, 2.5, and 5.0 mg/L. DESI-MS analysis of zebrafish gills demonstrated the appearance of a dealkylated AMMOENG 130 metabolite in the lowest concentration of exposure identified by a high resolution hybrid LTQ-Orbitrap mass spectrometer as the trimethylstearylammonium ion, [C21H46N]+. With DESI-MSI, the accumulation of AMMOENG 130 and its dealkylated metabolite in zebrafish tissue was found in the nervous and respiratory systems. AMMOENG 130 and the metabolite were capable of penetrating the blood brain barrier of the fish with significant accumulation in the brain. Hence, we report for the first time the simultaneous characterization, distribution, and metabolism of a toxic IL in whole body zebrafish analyzed by DESI-MSI. This ambient mass spectrometry imaging technique shows great promise for the direct analysis of biological tissues to qualitatively monitor foreign, toxic, and persistent compounds in aquatic organisms from the environment.

  4. Comparative Analysis of Kabuli Chickpea Transcriptome with Desi and Wild Chickpea Provides a Rich Resource for Development of Functional Markers

    PubMed Central

    Priya, Pushp; Singh, Vikash K.; Saxena, Maneesha S.; Parida, Swarup K.; Garg, Rohini; Tyagi, Akhilesh K.; Jain, Mukesh

    2012-01-01

    Chickpea (Cicer arietinum L.) is an important crop legume plant with high nutritional value. The transcriptomes of desi and wild chickpea have already been sequenced. In this study, we sequenced the transcriptome of kabuli chickpea, C. arietinum (genotype ICCV2), having higher commercial value, using GS-FLX Roche 454 and Illumina technologies. The assemblies of both Roche 454 and Illumina datasets were optimized using various assembly programs and parameters. The final optimized hybrid assembly generated 43,389 transcripts with an average length of 1065 bp and N50 length of 1653 bp representing 46.2 Mb of kabuli chickpea transcriptome. We identified a total of 5409 simple sequence repeats (SSRs) in these transcript sequences. Among these, at least 130 and 493 SSRs were polymorphic with desi (ICC4958) and wild (PI489777) chickpea, respectively. In addition, a total of 1986 and 37,954 single nucleotide polymorphisms (SNPs) were predicted in kabuli/desi and kabuli/wild genotypes, respectively. The SNP frequency was 0.043 SNP per kb for kabuli/desi and 0.821 SNP per kb for kabuli/wild, reflecting very low genetic diversity in chickpea. Further, SSRs and SNPs present in tissue-specific and transcription factor encoding transcripts have been identified. The experimental validation of a selected set of polymorphic SSRs and SNPs exhibited high intra-specific polymorphism potential between desi and kabuli chickpea, suggesting their utility in large-scale genotyping applications. The kabuli chickpea gene index assembled, and SSRs and SNPs identified in this study will serve as useful genomic resource for genetic improvement of chickpea. PMID:23300670

  5. Monitoring Toxic Ionic Liquids in Zebrafish ( Danio rerio) with Desorption Electrospray Ionization Mass Spectrometry Imaging (DESI-MSI)

    NASA Astrophysics Data System (ADS)

    Perez, Consuelo J.; Tata, Alessandra; de Campos, Michel L.; Peng, Chun; Ifa, Demian R.

    2017-06-01

    Ambient mass spectrometry imaging has become an increasingly powerful technique for the direct analysis of biological tissues in the open environment with minimal sample preparation and fast analysis times. In this study, we introduce desorption electrospray ionization mass spectrometry imaging (DESI-MSI) as a novel, rapid, and sensitive approach to localize the accumulation of a mildly toxic ionic liquid (IL), AMMOENG 130 in zebrafish ( Danio rerio). The work demonstrates that DESI-MSI has the potential to rapidly monitor the accumulation of IL pollutants in aquatic organisms. AMMOENG 130 is a quaternary ammonium-based IL reported to be broadly used as a surfactant in commercialized detergents. It is known to exhibit acute toxicity to zebrafish causing extensive damage to gill secondary lamellae and increasing membrane permeability. Zebrafish were exposed to the IL in a static 96-h exposure study in concentrations near the LC50 of 1.25, 2.5, and 5.0 mg/L. DESI-MS analysis of zebrafish gills demonstrated the appearance of a dealkylated AMMOENG 130 metabolite in the lowest concentration of exposure identified by a high resolution hybrid LTQ-Orbitrap mass spectrometer as the trimethylstearylammonium ion, [C21H46N]+. With DESI-MSI, the accumulation of AMMOENG 130 and its dealkylated metabolite in zebrafish tissue was found in the nervous and respiratory systems. AMMOENG 130 and the metabolite were capable of penetrating the blood brain barrier of the fish with significant accumulation in the brain. Hence, we report for the first time the simultaneous characterization, distribution, and metabolism of a toxic IL in whole body zebrafish analyzed by DESI-MSI. This ambient mass spectrometry imaging technique shows great promise for the direct analysis of biological tissues to qualitatively monitor foreign, toxic, and persistent compounds in aquatic organisms from the environment. [Figure not available: see fulltext.

  6. Analysis of lipids with desorption atmospheric pressure photoionization-mass spectrometry (DAPPI-MS) and desorption electrospray ionization-mass spectrometry (DESI-MS).

    PubMed

    Suni, Niina M; Aalto, Henni; Kauppila, Tiina J; Kotiaho, Tapio; Kostiainen, Risto

    2012-05-01

    In this article, the effect of spray solvent on the analysis of selected lipids including fatty acids, fat-soluble vitamins, triacylglycerols, steroids, phospholipids, and sphingolipids has been studied by two different ambient mass spectrometry (MS) methods, desorption electrospray ionization-MS (DESI-MS) and desorption atmospheric pressure photoionization-MS (DAPPI-MS). The ionization of the lipids with DESI and DAPPI was strongly dependent on the spray solvent. In most cases, the lipids were detected as protonated or deprotonated molecules; however, other ions were also formed, such as adduct ions (in DESI), [M-H](+) ions (in DESI and DAPPI), radical ions (in DAPPI), and abundant oxidation products (in DESI and DAPPI). DAPPI provided efficient desorption and ionization for neutral and less polar as well as for ionic lipids but caused extensive fragmentation for larger and more labile compounds because of a thermal desorption process. DESI was more suitable for the analysis of the large and labile lipids, but the ionization efficiency for less polar lipids was poor. Both methods were successfully applied to the direct analysis of lipids from pharmaceutical and food products. Although DESI and DAPPI provide efficient analysis of lipids, the multiple and largely unpredictable ionization reactions may set challenges for routine lipid analysis with these methods. Copyright © 2012 John Wiley & Sons, Ltd.

  7. 21 CFR 330.12 - Status of over-the-counter (OTC) drugs previously reviewed under the Drug Efficacy Study (DESI).

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ... filing of objections. (vi) Thorexin Cough Medicine (DESI 11160) for which a notice of opportunity for... (37 FR 5294), and confirmed in the Federal Register of July 6, 1972 (37 FR 13254). (xi) Candette...

  8. 21 CFR 330.12 - Status of over-the-counter (OTC) drugs previously reviewed under the Drug Efficacy Study (DESI).

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... filing of objections. (vi) Thorexin Cough Medicine (DESI 11160) for which a notice of opportunity for... (37 FR 5294), and confirmed in the Federal Register of July 6, 1972 (37 FR 13254). (xi) Candette Cough...

  9. 21 CFR 330.12 - Status of over-the-counter (OTC) drugs previously reviewed under the Drug Efficacy Study (DESI).

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... filing of objections. (vi) Thorexin Cough Medicine (DESI 11160) for which a notice of opportunity for... (37 FR 5294), and confirmed in the Federal Register of July 6, 1972 (37 FR 13254). (xi) Candette Cough...

  10. 21 CFR 330.12 - Status of over-the-counter (OTC) drugs previously reviewed under the Drug Efficacy Study (DESI).

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... filing of objections. (vi) Thorexin Cough Medicine (DESI 11160) for which a notice of opportunity for... (37 FR 5294), and confirmed in the Federal Register of July 6, 1972 (37 FR 13254). (xi) Candette Cough...

  11. 21 CFR 330.12 - Status of over-the-counter (OTC) drugs previously reviewed under the Drug Efficacy Study (DESI).

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... filing of objections. (vi) Thorexin Cough Medicine (DESI 11160) for which a notice of opportunity for... (37 FR 5294), and confirmed in the Federal Register of July 6, 1972 (37 FR 13254). (xi) Candette Cough...

  12. Understanding the molecular signatures in leaves and flowers by desorption electrospray ionization mass spectrometry (DESI MS) imaging.

    PubMed

    Hemalatha, R G; Pradeep, T

    2013-08-07

    The difference in size, shape, and chemical cues of leaves and flowers display the underlying genetic makeup and their interactions with the environment. The need to understand the molecular signatures of these fragile plant surfaces is illustrated with a model plant, Madagascar periwinkle (Catharanthus roseus (L.) G. Don). Flat, thin layer chromatographic imprints of leaves/petals were imaged using desorption electrospray ionization mass spectrometry (DESI MS), and the results were compared with electrospray ionization mass spectrometry (ESI MS) of their extracts. Tandem mass spectrometry with DESI and ESI, in conjunction with database records, confirmed the molecular species. This protocol has been extended to other plants. Implications of this study in identifying varietal differences, toxic metabolite production, changes in metabolites during growth, pest/pathogen attack, and natural stresses are shown with illustrations. The possibility to image subtle features like eye color of petals, leaf vacuole, leaf margin, and veins is demonstrated.

  13. DESI-MS imaging and NMR spectroscopy to investigate the influence of biodiesel in the structure of commercial rubbers.

    PubMed

    Silva, Lorena M A; Alves Filho, Elenilson G; Simpson, André J; Monteiro, Marcos R; Cabral, Elaine; Ifa, Demian; Venâncio, Tiago

    2017-10-01

    Biodiesel has been introduced as an energetic matrix in several countries around the world. However, the affinity of biodiesel with the components of petrodiesel engines is a growing concern. In order to obtain information regarding the effect of biodiesel on the rubber structure, nuclear magnetic resonance technics under a new technology named as comprehensive multiphase (CMP NMR) and the imaging through desorption electrospray ionization mass spectrometry (DESI-MS imaging) were used. The (1)H CMP-DOSY NMR showed the entrapped fuel into the rubber cavities, which the higher constraint caused by the rubber structure is related to the smaller diffusion coefficient. The less affected type of rubber by biodiesel was ethylene-propylene-diene monomer (EPDM), and the most affected was synthetic rubber nitrile (NBR). The (13)C CMP MAS-SPE experiments also confirmed that the internal region of EPDM was less accessible to the biodiesel molecules (no fuels detected) while other rubbers were more susceptible to the penetration of the fuel. DESI-MS imaging revealed for the first time the topography of the rubbers exposed to fuels. The biodiesel molecules entrapped at the EPDM and NBR pores were in oxidized form, which might degrade the rubber structure at long exposure time. The employed technics enabled the study of dynamic and molecular structure of the mixing complex multiphase. The DOSY under CMP used in this study could prove helpful in assessing the interactions throughout all physical phases (liquid, solid, and gel or semi-solid) by observing swellability caused by the fuel in the rubber. In addition, the DESI-MS was especially valuable to detect the degradation products of biodiesel entangled at the rubber structure. In our knowledge, this was the first report in which chemical changes of commercial rubbers induced by biodiesel and petrodiesel were investigated by means of DESI-MS and DOSY NMR. Copyright © 2017 Elsevier B.V. All rights reserved.

  14. Direct Visualization of Neurotransmitters in Rat Brain Slices by Desorption Electrospray Ionization Mass Spectrometry Imaging (DESI - MS)

    NASA Astrophysics Data System (ADS)

    Fernandes, Anna Maria A. P.; Vendramini, Pedro H.; Galaverna, Renan; Schwab, Nicolas V.; Alberici, Luciane C.; Augusti, Rodinei; Castilho, Roger F.; Eberlin, Marcos N.

    2016-12-01

    Mass spectrometry imaging (MSI) of neurotransmitters has so far been mainly performed by matrix-assisted laser desorption/ionization (MALDI) where derivatization reagents, deuterated matrix and/or high resolution, or tandem MS have been applied to circumvent problems with interfering ion peaks from matrix and from isobaric species. We herein describe the application of desorption electrospray ionization mass spectrometry imaging (DESI)-MSI in rat brain coronal and sagittal slices for direct spatial monitoring of neurotransmitters and choline with no need of derivatization reagents and/or deuterated materials. The amino acids γ-aminobutyric (GABA), glutamate, aspartate, serine, as well as acetylcholine, dopamine, and choline were successfully imaged using a commercial DESI source coupled to a hybrid quadrupole-Orbitrap mass spectrometer. The spatial distribution of the analyzed compounds in different brain regions was determined. We conclude that the ambient matrix-free DESI-MSI is suitable for neurotransmitter imaging and could be applied in studies that involve evaluation of imbalances in neurotransmitters levels.

  15. The Coadministration of Unoxidized and Oxidized Desi Ghee Ameliorates the Toxic Effects of Thermally Oxidized Ghee in Rabbits

    PubMed Central

    Uddin, Islam

    2017-01-01

    Desi Ghee was thermally oxidized at 160°C for 9 h and characterized for peroxide value (PV), free fatty acid (FFA), thiobarbituric acid reactive substances (TBARS), radical scavenging activity (RSA), and fatty acid and cholesterol composition using GC-MS. Oxidized (OG) and normal ghee (NG) were fed to rabbits in different doses. Blood was collected for hematology and biochemical analyses after 7 and 14 days. The oxidation of desi ghee increased the PV, FFA, and TBARS values and showed a decline in the RSA values. GC-MS revealed that desi ghee was rich in saturated fatty acids (55.9 g/100 g) and significant amounts of oleic acid (26.2 g/100 g). The OG significantly decreased the body weight, which was normalized by the coadministration of NG. Serum lipid profile showed a dose dependent increase in total cholesterol, triglycerides, and low density lipoproteins (LDL) and decrease in RBCs count, hematocrit, glucose, and hemoglobin concentration with OG feeding. These parameters were normalized by coadministration of NG. Liver histopathology of OG fed groups showed bile duct dilation and necrotic changes, while normal architecture showed in NG groups, compared to control. These results indicate that NG has no significant effect on rabbits comparing with OG and that it was beneficial when coadministered with oxidized ghee. PMID:28299204

  16. Direct Visualization of Neurotransmitters in Rat Brain Slices by Desorption Electrospray Ionization Mass Spectrometry Imaging (DESI - MS).

    PubMed

    Fernandes, Anna Maria A P; Vendramini, Pedro H; Galaverna, Renan; Schwab, Nicolas V; Alberici, Luciane C; Augusti, Rodinei; Castilho, Roger F; Eberlin, Marcos N

    2016-12-01

    Mass spectrometry imaging (MSI) of neurotransmitters has so far been mainly performed by matrix-assisted laser desorption/ionization (MALDI) where derivatization reagents, deuterated matrix and/or high resolution, or tandem MS have been applied to circumvent problems with interfering ion peaks from matrix and from isobaric species. We herein describe the application of desorption electrospray ionization mass spectrometry imaging (DESI)-MSI in rat brain coronal and sagittal slices for direct spatial monitoring of neurotransmitters and choline with no need of derivatization reagents and/or deuterated materials. The amino acids γ-aminobutyric (GABA), glutamate, aspartate, serine, as well as acetylcholine, dopamine, and choline were successfully imaged using a commercial DESI source coupled to a hybrid quadrupole-Orbitrap mass spectrometer. The spatial distribution of the analyzed compounds in different brain regions was determined. We conclude that the ambient matrix-free DESI-MSI is suitable for neurotransmitter imaging and could be applied in studies that involve evaluation of imbalances in neurotransmitters levels. Graphical Abstract ᅟ.

  17. Studies on a VUV free electron laser at the TESLA Test Facility at DESY

    SciTech Connect

    Rossbach, J.

    1995-12-31

    The TESLA Test Facility (TTF) currently under construction at DESY is a test-bed for acceleration sections of a high-gradient, high efficiency superconducting linear collider. Due to ist unrivaled ability to sustain high beam quality during acceleration, a superconducting rf linac is considered the optimum choice to drive a Free Electron Laser (FEL). We aim at a photon wavelength of {lambda} = 6 manometer utilizing the TTF after is has been extended to 1 GeV beam energy. Due to lack of mirrors and seed-lasers in this wavelength regime, a single pass FEL and Self-Amplified-Spontaneous-Emission (SASE) is considered. A first test is foreseen at a larger photon wavelength. The overall design as well as both electron and photon beam properties will be discussed. To reach the desired photon wavelength, the main components that have to be added to the TTF are: (a) a low emittance rf gun including space charge compensation (b) a two stage bunch compressor increasing the peak bunch current from 100 A up to 2500 A (c) four more accelerating modules to achieve 1 GeV beam energy (d) a 25 m long undulator (period length 27 mm, peak field 0.5 T) The average brillance will be larger than 1-10{sup 22}photons/s/mm{sup 2}/mrad{sup 2}/0.1%. Each 800 {mu}s long pulse will contain up to 7200 equidistant bunches. The repetition frequency of the linac is 10 Hz.

  18. Transatlantic transport of Fermilab 3.9 GHz cryomodule for TTF/FLASH to DESY

    SciTech Connect

    McGee, M.W.; Vocean, V.; Grimm, C.; Schappert, W.; /Fermilab

    2008-06-01

    In an exchange of technology agreement, Fermilab built and will deliver a 3.9 GHz (3rd harmonic) cryomodule to DESY to be installed in the TTF/FLASH beamline. This cryomodule delivery will involve a combination of flatbed air ride truck and commercial aircraft transport to Hamburg Germany. A description of the isolation and damping systems that maintain alignment during transport and protect fragile components is provided. Initially, transport and corresponding alignment stability studies were performed in order to assess the risk associated with transatlantic travel of a fully assembled cryomodule. Shock loads were applied to the cryomodule by using a coldmass mockup to prevent subjecting actual critical components (such as the cavities and input couplers) to excessive forces. Accumulative and peak shock loads were applied through over-the-road testing and using a pendulum hammer apparatus, respectively. Finite Element Analysis (FEA) studies were implemented to define location of instrumentation for transport studies and provide modal frequencies and shapes. Shock and vibration measurement results of transport studies and stabilization techniques are discussed.

  19. Imprint of DESI fiber assignment on anisotropic power spectrum of emission line galaxies

    NASA Astrophysics Data System (ADS)

    Cahn, Robert N.; Pinol, Lucas; Hand, Nicholas; McDonald, Patrick; Seljak, Uros

    2017-01-01

    The Dark Energy Spectroscopic Instrument (DESI), a multiplexed fiber-fed spectrograph, is a Stage-IV ground-based dark energy experiment aiming to measure redshifts for 29 million Emission-Line Galaxies (ELG), 4 million Luminous Red Galaxies (LRG), and 2 million Quasi-Stellar Objects (QSO). The survey design includes an observation strategy determined by a fiber assignment algorithm that optimizes the allocation of fibers to targets. We investigate the systematic effects of the fiber assignment coverage on the anisotropic galaxy clustering of ELGs and show that, in the absence of any corrections, it leads to discrepancies of order ten percent on large scales for the power spectrum multipoles. We introduce a method where objects in a random catalog are assigned a coverage, and the mean density is separately computed for each coverage factor, and show that this method reduces, but does not eliminate the effect. The angular dependence of the contaminating signal is mostly in purely transverse modes. We find that the effect can be mitigated by binning in angle and excluding contributions near the transverse direction. This material is based upon work supported in part by the U.S. Department of Energy, Office of Science, Office of High Energy Physics, under Contract No. DE-AC02-05CH11231.

  20. Properties of hadronic final states in diffractive deep inelastic ep scattering at DESY HERA

    NASA Astrophysics Data System (ADS)

    Chekanov, S.; Derrick, M.; Krakauer, D.; Magill, S.; Musgrave, B.; Pellegrino, A.; Repond, J.; Yoshida, R.; Mattingly, M. C.; Antonioli, P.; Bari, G.; Basile, M.; Bellagamba, L.; Boscherini, D.; Bruni, A.; Bruni, G.; Romeo, G. Cara; Cifarelli, L.; Cindolo, F.; Contin, A.; Corradi, M.; de Pasquale, S.; Giusti, P.; Iacobucci, G.; Levi, G.; Margotti, A.; Massam, T.; Nania, R.; Palmonari, F.; Pesci, A.; Sartorelli, G.; Zichichi, A.; Aghuzumtsyan, G.; Brock, I.; Goers, S.; Hartmann, H.; Hilger, E.; Irrgang, P.; Jakob, H.-P.; Kappes, A.; Katz, U. F.; Kerger, R.; Kind, O.; Paul, E.; Rautenberg, J.; Schnurbusch, H.; Stifutkin, A.; Tandler, J.; Voss, K. C.; Weber, A.; Wieber, H.; Bailey, D. S.; Brook, N. H.; Cole, J. E.; Foster, B.; Heath, G. P.; Heath, H. F.; Robins, S.; Rodrigues, E.; Scott, J.; Tapper, R. J.; Wing, M.; Capua, M.; Mastroberardino, A.; Schioppa, M.; Susinno, G.; Jeoung, H. Y.; Kim, J. Y.; Lee, J. H.; Lim, I. T.; Ma, K. J.; Pac, M. Y.; Caldwell, A.; Helbich, M.; Liu, W.; Liu, X.; Mellado, B.; Paganis, S.; Sampson, S.; Schmidke, W. B.; Sciulli, F.; Chwastowski, J.; Eskreys, A.; Figiel, J.; Klimek, K.; Olkiewicz, K.; Przybycień, M. B.; Stopa, P.; Zawiejski, L.; Bednarek, B.; Grabowska-Bold, I.; Jeleń, K.; Kisielewska, D.; Kowal, A. M.; Kowal, M.; Kowalski, T.; Mindur, B.; Przybycień, M.; Rulikowska-Zarȩbska, E.; Suszycki, L.; Szuba, D.; Szuba, J.; Kotański, A.; Bauerdick, L. A.; Behrens, U.; Borras, K.; Chiochia, V.; Crittenden, J.; Dannheim, D.; Desler, K.; Drews, G.; Fox-Murphy, A.; Fricke, U.; Geiser, A.; Goebel, F.; Göttlicher, P.; Graciani, R.; Haas, T.; Hain, W.; Hartner, G. F.; Hebbel, K.; Hillert, S.; Koch, W.; Kötz, U.; Kowalski, H.; Labes, H.; Löhr, B.; Mankel, R.; Martens, J.; Martínez, M.; Milite, M.; Moritz, M.; Notz, D.; Petrucci, M. C.; Polini, A.; Schneekloth, U.; Selonke, F.; Stonjek, S.; Wolf, G.; Wollmer, U.; Whitmore, J. J.; Wichmann, R.; Youngman, C.; Zeuner, W.; Coldewey, C.; Viani, A. Lopez-Duran; Meyer, A.; Schlenstedt, S.; Barbagli, G.; Gallo, E.; Pelfer, P. G.; Bamberger, A.; Benen, A.; Coppola, N.; Markun, P.; Raach, H.; Wölfle, S.; Bell, M.; Bussey, P. J.; Doyle, A. T.; Glasman, C.; Lee, S. W.; Lupi, A.; McCance, G. J.; Saxon, D. H.; Skillicorn, I. O.; Bodmann, B.; Gendner, N.; Holm, U.; Salehi, H.; Wick, K.; Yildirim, A.; Ziegler, A.; Carli, T.; Garfagnini, A.; Gialas, I.; Lohrmann, E.; Foudas, C.; Gonçalo, R.; Long, K. R.; Metlica, F.; Miller, D. B.; Tapper, A. D.; Walker, R.; Cloth, P.; Filges, D.; Kuze, M.; Nagano, K.; Tokushuku, K.; Yamada, S.; Yamazaki, Y.; Barakbaev, A. N.; Boos, E. G.; Pokrovskiy, N. S.; Zhautykov, B. O.; Ahn, S. H.; Lee, S. B.; Park, S. K.; Lim, H.; Son, D.; Barreiro, F.; García, G.; González, O.; Labarga, L.; del Peso, J.; Redondo, I.; Terrón, J.; Vázquez, M.; Barbi, M.; Bertolin, A.; Corriveau, F.; Ochs, A.; Padhi, S.; Stairs, D. G.; Tsurugai, T.; Antonov, A.; Bashkirov, V.; Danilov, P.; Dolgoshein, B. A.; Gladkov, D.; Sosnovtsev, V.; Suchkov, S.; Dementiev, R. K.; Ermolov, P. F.; Golubkov, Yu. A.; Katkov, I. I.; Khein, L. A.; Korotkova, N. A.; Korzhavina, I. A.; Kuzmin, V. A.; Levchenko, B. B.; Lukina, O. Yu.; Proskuryakov, A. S.; Shcheglova, L. M.; Solomin, A. N.; Vlasov, N. N.; Zotkin, S. A.; Bokel, C.; Engelen, J.; Grijpink, S.; Maddox, E.; Koffeman, E.; Kooijman, P.; Schagen, S.; Tassi, E.; Tiecke, H.; Tuning, N.; Velthuis, J. J.; Wiggers, L.; de Wolf, E.; Brümmer, N.; Bylsma, B.; Durkin, L. S.; Gilmore, J.; Ginsburg, C. M.; Kim, C. L.; Ling, T. Y.; Boogert, S.; Cooper-Sarkar, A. M.; Devenish, R. C.; Ferrando, J.; Große-Knetter, J.; Matsushita, T.; Rigby, M.; Ruske, O.; Sutton, M. R.; Walczak, R.; Brugnera, R.; Carlin, R.; Corso, F. Dal; Dusini, S.; Limentani, S.; Longhin, A.; Parenti, A.; Posocco, M.; Stanco, L.; Turcato, M.; Adamczyk, L.; Iannotti, L.; Oh, B. Y.; Saull, P. R.; Toothacker, W. S.; Iga, Y.; D'Agostini, G.; Marini, G.; Nigro, A.; Cormack, C.; Hart, J. C.; McCubbin, N. A.; Epperson, D.; Heusch, C.; Sadrozinski, H.; Seiden, A.; Williams, D. C.; Park, I. H.; Pavel, N.; Abramowicz, H.; Dagan, S.; Gabareen, A.; Kananov, S.; Kreisel, A.; Levy, A.; Abe, T.; Fusayasu, T.; Kohno, T.; Umemori, K.; Yamashita, T.; Hamatsu, R.; Hirose, T.; Inuzuka, M.; Kitamura, S.; Matsuzawa, K.; Nishimura, T.; Arneodo, M.; Cartiglia, N.; Cirio, R.; Costa, M.; Ferrero, M. I.; Maselli, S.; Monaco, V.; Peroni, C.; Ruspa, M.; Sacchi, R.; Solano, A.; Staiano, A.; Bailey, D. C.; Fagerstroem, C.-P.; Galea, R.; Koop, T.; Levman, G. M.; Martin, J. F.; Mirea, A.; Sabetfakhri, A.; Butterworth, J. M.; Gwenlan, C.; Hall-Wilton, R.; Hayes, M. E.; Heaphy, E. A.; Jones, T. W.; Lane, J. B.; Lightwood, M. S.; West, B. J.; Ciborowski, J.; Ciesielski, R.; Grzelak, G.; Nowak, R. J.; Pawlak, J. M.; Smalska, B.; Tymieniecka, T.; Ukleja, A.; Ukleja, J.; Zakrzewski, J. A.; Żarnecki, A. F.; Adamus, M.; Plucinski, P.; Sztuk, J.; Eisenberg, Y.; Gladilin, L. K.; Hochman, D.; Karshon, U.; Breitweg, J.; Chapin, D.; Cross, R.; Kçira, D.; Lammers, S.; Reeder, D. D.; Savin, A. A.; Smith, W. H.; Deshpande, A.; Dhawan, S.; Hughes, V. W.; Straub, P. B.; Bhadra, S.; Catterall, C. D.; Frisken, W. R.; Khakzad, M.; Menary, S.

    2002-03-01

    Characteristics of the hadronic final state of diffractive deep inelastic scattering events ep-->eXp were studied in the kinematic range 4DESY ep collider HERA using an integrated luminosity of 13.8 pb-1. The events were tagged by identifying the diffractively scattered proton using the leading proton spectrometer. The properties of the hadronic final state X were studied in its center-of-mass frame using thrust, thrust angle, sphericity, energy flow, transverse energy flow, and ``seagull'' distributions. As the invariant mass of the system increases, the final state becomes more collimated, more aligned, and more asymmetric in the average transverse momentum with respect to the direction of the virtual photon. Comparisons of the properties of the hadronic final state with predictions from various Monte Carlo model generators suggest that the final state is dominated by qq&;g states at the parton level.

  1. Metabolic profiling directly from the Petri dish using nanoDESI imaging mass spectrometry

    PubMed Central

    Watrous, Jeramie; Roach, Patrick; Heath, Brandi; Alexandrov, Theodore; Laskin, Julia; Dorrestein, Pieter C.

    2014-01-01

    Understanding molecular interaction pathways in complex biological systems constitutes a treasure trove of knowledge that might facilitate the specific, chemical manipulation of the countless microbiological systems that occur throughout our world. However, there is a lack of methodologies that allow the direct investigation of chemical gradients and interactions in living biological systems, in real time. Here we report the use of nanospray desorption electrospray ionization (nanoDESI) imaging mass spectrometry for in vivo metabolic profiling of living bacterial colonies directly from the Petri dish with absolutely no sample preparation needed. Using this technique, we investigated single colonies of Shewanella oneidensis MR-1, Bacillus subtilis 3610, Streptomyces coelicolor A3(2) as well as a mixed biofilm of S. oneidensis MR-1 and B. subtilis 3610. Data from B. subtilis 3610 and S. coelicolor A3(2) provided a means of validation for the method while data from S. oneidensis MR-1 and the mixed biofilm showed a wide range of compounds that this bacterium uses for the dissimilatory reduction of extracellular metal oxides, including riboflavin, iron-bound heme and heme biosynthetic intermediates, and the siderophore putrebactin. PMID:24047514

  2. Optimizations of transverse projected emittance at the photo-injector test facility at DESY, location Zeuthen

    NASA Astrophysics Data System (ADS)

    Rimjaem, S.; Stephan, F.; Krasilnikov, M.; Ackermann, W.; Asova, G.; Bähr, J.; Gjonaj, E.; Grabosch, H. J.; Hakobyan, L.; Hänel, M.; Ivanisenko, Y.; Khojoyan, M.; Klemz, G.; Lederer, S.; Mahgoub, M.; Michelato, P.; Monaco, L.; Nozdrin, M.; O'Shea, B.; Otevrel, M.; Petrosyan, B.; Richter, D.; Rönsch-Schulenburg, J.; Sertore, D.; Schreiber, S.; Schnepp, S.; Shapovalov, A.; Spesyvtsev, R.; Staykov, L.; Vashchenko, G.; Weiland, T.; Will, I.

    2012-04-01

    High brightness electron sources for linac based short-wavelength free-electron lasers are developed and optimized for small transverse projected emittance at the photo-injector test facility at DESY, location Zeuthen (PITZ). A major part of the measurement program at PITZ is dedicated to transverse phase space optimization in order to fulfill the requirements of the European X-ray free-electron laser (European XFEL). A laser-driven RF-gun, treated with a dry-ice sublimation-impulse cleaning technique, a new photocathode laser system allowing short rise and fall times of the flat-top temporal distribution as well as several new diagnostic components have been installed at PITZ in 2008. The electrons generated via the photo-effect at a cesium telluride (Cs2Te) cathode are accelerated by a 1.6 cell L-band RF-gun cavity with a maximum accelerating gradient at the cathode of about 60 MV/m. The transverse projected emittance is measured using a single slit scan technique. In the 2008-2009 run period, a detailed characterization of the projected transverse emittance was performed at different operating conditions. Optimizations and measurement results as well as simulation predictions of the transverse projected emittance for bunch charges of 1, 0.5, 0.25 and 0.1 nC are presented and discussed in this paper. The geometric mean of the normalized projected rms emittance in both transverse directions for an electron bunch charge of 1 nC was measured to be 0.89±0.01 mm mrad for a 100% rms phase-space distribution.

  3. Imprint of DESI fiber assignment on the anisotropic power spectrum of emission line galaxies

    NASA Astrophysics Data System (ADS)

    Pinol, Lucas; Cahn, Robert N.; Hand, Nick; Seljak, Uroš; White, Martin

    2017-04-01

    The Dark Energy Spectroscopic Instrument (DESI), a multiplexed fiber-fed spectrograph, is a Stage-IV ground-based dark energy experiment aiming to measure redshifts for 29 million Emission-Line Galaxies (ELG), 4 million Luminous Red Galaxies (LRG), and 2 million Quasi-Stellar Objects (QSO). The survey design includes a pattern of tiling on the sky, the locations of the fiber positioners in the focal plane of the telescope, and an observation strategy determined by a fiber assignment algorithm that optimizes the allocation of fibers to targets. This strategy allows a given region to be covered on average five times for a five-year survey, with a typical variation of about 1.5 about the mean, which imprints a spatially-dependent pattern on the galaxy clustering. We investigate the systematic effects of the fiber assignment coverage on the anisotropic galaxy clustering of ELGs and show that, in the absence of any corrections, it leads to discrepancies of order ten percent on large scales for the power spectrum multipoles. We introduce a method where objects in a random catalog are assigned a coverage, and the mean density is separately computed for each coverage factor. We show that this method reduces, but does not eliminate the effect. We next investigate the angular dependence of the contaminated signal, arguing that it is mostly localized to purely transverse modes. We demonstrate that the cleanest way to remove the contaminating signal is to perform an analysis of the anisotropic power spectrum P(k,μ) and remove the lowest μ bin, leaving μ > 0 modes accurate at the few-percent level. Here, μ is the cosine of the angle between the line-of-sight and the direction of vec k. We also investigate two alternative definitions of the random catalog and show that they are comparable but less effective than the coverage randoms method.

  4. Benchmark datasets for 3D MALDI- and DESI-imaging mass spectrometry.

    PubMed

    Oetjen, Janina; Veselkov, Kirill; Watrous, Jeramie; McKenzie, James S; Becker, Michael; Hauberg-Lotte, Lena; Kobarg, Jan Hendrik; Strittmatter, Nicole; Mróz, Anna K; Hoffmann, Franziska; Trede, Dennis; Palmer, Andrew; Schiffler, Stefan; Steinhorst, Klaus; Aichler, Michaela; Goldin, Robert; Guntinas-Lichius, Orlando; von Eggeling, Ferdinand; Thiele, Herbert; Maedler, Kathrin; Walch, Axel; Maass, Peter; Dorrestein, Pieter C; Takats, Zoltan; Alexandrov, Theodore

    2015-01-01

    Three-dimensional (3D) imaging mass spectrometry (MS) is an analytical chemistry technique for the 3D molecular analysis of a tissue specimen, entire organ, or microbial colonies on an agar plate. 3D-imaging MS has unique advantages over existing 3D imaging techniques, offers novel perspectives for understanding the spatial organization of biological processes, and has growing potential to be introduced into routine use in both biology and medicine. Owing to the sheer quantity of data generated, the visualization, analysis, and interpretation of 3D imaging MS data remain a significant challenge. Bioinformatics research in this field is hampered by the lack of publicly available benchmark datasets needed to evaluate and compare algorithms. High-quality 3D imaging MS datasets from different biological systems at several labs were acquired, supplied with overview images and scripts demonstrating how to read them, and deposited into MetaboLights, an open repository for metabolomics data. 3D imaging MS data were collected from five samples using two types of 3D imaging MS. 3D matrix-assisted laser desorption/ionization imaging (MALDI) MS data were collected from murine pancreas, murine kidney, human oral squamous cell carcinoma, and interacting microbial colonies cultured in Petri dishes. 3D desorption electrospray ionization (DESI) imaging MS data were collected from a human colorectal adenocarcinoma. With the aim to stimulate computational research in the field of computational 3D imaging MS, selected high-quality 3D imaging MS datasets are provided that could be used by algorithm developers as benchmark datasets.

  5. Seasonal prevalence of gastrointestinal parasites in desi fowl (Gallus gallus domesticus) in and around Gannavaram, Andhra Pradesh.

    PubMed

    Sreedevi, C; Jyothisree, Ch; Rama Devi, V; Annapurna, P; Jeyabal, L

    2016-09-01

    A study was carried out to know the prevalence of gastrointestinal parasites in desi fowl in and nearby villages of Gannavaram, Andhra Pradesh for a period of 1 year. Screening of 492 samples comprising faecal samples and gastrointestinal tracts from freshly slaughtered desi birds at local poultry shops and samples from post mortem examinations at NTR College of Veterinary Science, Gannavaram revealed 63.21 % of gastrointestinal parasites. Faecal samples were examined by floatation technique using salt solution and samples positive for coccidian oocysts were sporulated in 2.5 % potassium dichromate solution for species identification. Adult worms were identified after routine processing and mounting. The species identified includes Davainea proglottina, Raillietina cesticillus and Raillietina echinobothrida in cestodes (32.47 %), Ascaridia galli, Capillaria annulata, Heterakis gallinarum in nematodes (39.87 %), Eimeria tenella, Eimeria acervulina and Eimeria necatrix in Eimeria spp. (39.87 %). Ascaridia galli and R. cesticillus and A. galli and Eimeria spp. were common in mixed infection (12.86 %). Ascaridia galli was the more prevalent species. No trematode parasite was identified during the study period. Significant (p = 0.001) relationship between the seasonality and prevalence of gastrointestinal parasites was observed (χ2 = 17.46, df = 2). Data revealed high prevalence in rainy season (43.41 %) followed by summer (38.91 %) and winter (17.68 %) seasons for all parasites except for A. galli and C. annulata infections which were higher in summer season. Results indicated high prevalence of gastrointestinal parasites in desi fowl in study area emphasizing the need of improved management practices of backyard poultry.

  6. Studies on the effectiveness of oral pellet vaccine in improving egg production and egg quality in desi chicken

    PubMed Central

    Reetha, T. Lurthu; Rajeswar, J. Johnson; Harikrishnan, T. J.; Sukumar, K.; Srinivasan, P.; Kirubakaran, J. John

    2016-01-01

    Aim: To study the effect of Newcastle disease (ND) oral pellet vaccine in egg production and egg quality in desi chicken. Materials and Methods: The study was conducted at Veterinary University Training and Research Centre, Tiruchirapalli, Tamil Nadu. A total of 48-day-old desi chicks obtained from a private hatchery in Namakkal, Tamil Nadu, were maintained under cage system of rearing up to 52 weeks of age as per standard management practices. All the 48 chicks were divided into six groups having eight chicks in each group were subjected to different treatment regimes. All the birds were challenged at 52 weeks of age with 0.5 ml dose of 104.0 egg infectious dose 50 virulent ND field virus. 10 eggs from each group were randomly collected during the last 3 days of 8 weeks interval period from 28 to 52 weeks of age and were used to measure the egg quality parameters. The production performance of each group was assessed at 4 weeks interval period from 25 to 52 weeks of age. Results: In all the six treatment groups with respect to egg production, no significant difference (p≥0.05) was noticed from 25 to 52 weeks of age. Similarly, in egg weight, egg shape index and specific gravity, no significant difference (p≥0.05) was noticed from 28 to 52 weeks of age. Conclusion: From this study, it is concluded that the administration of ND oral pellet vaccine to desi chicken does not affect the egg production performance, egg weight, egg shape index, and specific gravity of egg. PMID:27651681

  7. Ambient DESI and LESA-MS Analysis of Proteins Adsorbed to a Biomaterial Surface Using In-Situ Surface Tryptic Digestion

    NASA Astrophysics Data System (ADS)

    Rao, Wei; Celiz, Adam D.; Scurr, David J.; Alexander, Morgan R.; Barrett, David A.

    2013-12-01

    The detection and identification of proteins adsorbed onto biomaterial surfaces under ambient conditions has significant experimental advantages but has proven to be difficult to achieve with conventional measuring technologies. In this study, we present an adaptation of desorption electrospray ionization (DESI) and liquid extraction surface analysis (LESA) mass spectrometry (MS) coupled with in-situ surface tryptic digestion to identify protein species from a biomaterial surface. Cytochrome c, myoglobin, and BSA in a combination of single and mixture spots were printed in an array format onto Permanox slides, followed by in-situ surface digestion and detection via MS. Automated tandem MS performed on surface peptides was able to identify the proteins via MASCOT. Limits of detection were determined for DESI-MS and a comparison of DESI and LESA-MS peptide spectra characteristics and sensitivity was made. DESI-MS images of the arrays were produced and analyzed with imaging multivariate analysis to automatically separate peptide peaks for each of the proteins within a mixture into distinct components. This is the first time that DESI and LESA-MS have been used for the in-situ detection of surface digested proteins on biomaterial surfaces and presents a promising proof of concept for the use of ambient MS in the rapid and automated analysis of surface proteins.

  8. Detection of follicular transport of lidocaine and metabolism in adipose tissue in pig ear skin by DESI mass spectrometry imaging.

    PubMed

    D'Alvise, Janina; Mortensen, Rasmus; Hansen, Steen H; Janfelt, Christian

    2014-06-01

    Desorption electrospray ionization (DESI) mass spectrometry imaging is demonstrated as a detection technique for penetration experiments of drugs in skin. Lidocaine ointment was used as the model compound in ex vivo experiments with whole pig ears as the skin model. Follicular transport of lidocaine into the deeper skin layers is demonstrated for the first time. Furthermore, metabolism of lidocaine to 3-OH-lidocaine was observed in subcutaneous tissue as well as in lobules of white adipose tissue surrounding the hair follicles. These results suggest that it is advantageous to use full thickness skin, including subcutaneous tissue, for skin metabolism studies.

  9. "Loops and Legs in Quantum Field Theory", 12th DESY Workshop on Elementary Particle Physics

    NASA Astrophysics Data System (ADS)

    excellent working conditions. We would like to thank Martina Mende for all her work in helping to organize this conference. Details of the conference can be found under: https://indico.desy.de/conferenceDisplay.py?confId=8107

  10. DESI-MS2: a rapid and innovative method for trace analysis of six cytostatic drugs in health care setting.

    PubMed

    Fabrizi, Giovanni; Fioretti, Marzia; Rocca, Lucia Mainero; Curini, Roberta

    2012-05-01

    With the aim of establishing exposure levels for hospital personnel preparing and administering cytostatic drugs (CDs), here, we present an innovative screening method based on the use of the desorption electrospray ionization (DESI) interface coupled with a hybrid quadrupole linear ion trap mass spectrometer. A rapid, simple, and sensitive procedure was developed for the simultaneous surface monitoring of cyclophosphamide, dacarbazine, methotrexate, vincristine, gemcitabine, and cytarabine. Since analytes were in the solid state, a novel approach based on the use of passive samplers was combined with the direct analysis of wipes. A PTFE-printed glass slide was used as a passive sampler, while hydrophobic centers of Swiffer® cloths were judged extremely efficient as wipe samplers. After the sampling period, the CD collectors were directly processed with the DESI-MS system without any further treatment. MS/MS confirmatory analysis was conducted using selected reaction monitoring in the positive ion mode and detection limits were evaluated. Values were at the picograms per square millimeter levels on the passive collector and at the picograms per square centimeter levels for the wipe ones. Direct determination on solid-state samples combined with mass spectrometry selectivity provided a powerful tool so far unapplied to occupational hygiene.

  11. TiO2 photocatalysis-DESI-MS rotating array platform for high-throughput investigation of oxidation reactions.

    PubMed

    Ruokolainen, Miina; Miikkulainen, Ville; Ritala, Mikko; Sikanen, Tiina M; Kotiaho, Tapio; Kostiainen, Risto

    2017-10-03

    We present a new high-throughput platform for studying TiO2 photocatalytic oxidation reactions by performing reactions on a TiO2-coated surface, followed by direct analysis of oxidation products from the surface by desorption electrospray ionization mass spectrometry (DESI-MS). For this purpose, we coated a round glass wafer with photocatalytically active anatase-phase TiO2 using atomic layer deposition. Approximately 70 aqueous 1 µL samples can be injected onto the rim of the TiO2-coated glass wafer, before the entire wafer is exposed to UV irradiation. After evaporation of water, the oxidation products can be directly analyzed from the sample spots by DESI-MS, using a commercial rotating sample platform. The method was shown to provide fast photocatalytic oxidation reactions and analysis with throughput of about four samples per minute. The feasibility of the method was examined for mimicking phase I metabolism reactions of amodiaquine, buspirone and verapamil. Their main photocatalytic reaction products were mostly similar to the products observed earlier in TiO2 photocatalysis and in in vitro phase I metabolism assays performed using human liver microsomes.

  12. Near-isogenic lines of desi chickpea (Cicer arietinum L.) that differ in milling ease: differences in chemical composition.

    PubMed

    Wood, Jennifer A; Knights, Edmund J; Campbell, Grant M; Choct, Mingan

    2017-03-01

    Milling performance is an important attribute for desi chickpea and other pulses, as varieties that are more difficult-to-mill lead to processing yield loss and damage to the resulting split cotyledons (dhal) such as chipping and abrasion which are unattractive to the consumer. Poor milling performance leads to poor dhal quality and therefore lower prices and profitability along the pulse value chain. The Pulse Breeding Australia Chickpea Program identified near-isogenic desi lines that differed in seed shape and milling yields, however it was unknown whether this was due simply to a difference in physical forces on the seed during milling, mediated by seed shape, or whether there were underlying differences in chemical composition that could explain these differences. The two isolines differed in the composition of their seed coat, cotyledons and adjoining surfaces. Some of these differences were in agreement with previous research on composition of easy- and difficult-to-mill samples. These differences suggest that biochemical adhesive or cohesive mechanisms at the interface of seed tissues involve pectic polysaccharides and lignin-mediated binding.

  13. An Assessment of the Utility of Tissue Smears in Rapid Cancer Profiling with Desorption Electrospray Ionization Mass Spectrometry (DESI-MS)

    NASA Astrophysics Data System (ADS)

    Woolman, Michael; Tata, Alessandra; Bluemke, Emma; Dara, Delaram; Ginsberg, Howard J.; Zarrine-Afsar, Arash

    2017-01-01

    Mass spectrometry imaging with desorption electrospray ionization mass spectrometry (DESI-MS) is used to characterize cancer from ex vivo slices of tissues. The process is time-consuming. The use of tissue smears for DESI-MS analysis has been proposed as it eliminates the time required to snap-freeze and section the tissue. To assess the utility of tissue smears for rapid cancer characterization, principal component analysis (PCA) was performed to evaluate the concordance between DESI-MS profiles of breast cancer from tissue slices and smears prepared on various surfaces. PCA suggested no statistical discrimination between DESI-MS profiles of tissue sections and tissue smears prepared on glass, polytetrafluoroethylene (PTFE), and porous PTFE. However, the abundances of cancer biomarker ions varied between sections and smears, with DESI-MS analysis of tissue sections yielding higher ion abundances of cancer biomarkers compared with smears. Coefficient of variance (CV) analysis suggests DESI-MS profiles from tissue smears are as reproducible as the ones from tissue sections. The limit of detection with smear samples from single pixel analysis is comparable to tissue sections that average the signal from a tissue area of 0.01 mm2. The smears prepared on the PTFE surface possessed a higher degree of homogeneity compared with the smears prepared on the glass surface. This allowed single MS scans ( 1 s) from random positions across the surface of the smear to be used in rapid cancer typing with good reproducibility, providing pathologic information for cancer typing at speeds suitable for clinical utility.

  14. Recent breeding programs enhanced genetic diversity in both desi and kabuli varieties of chickpea (Cicer arietinum L.)

    PubMed Central

    Thudi, Mahendar; Chitikineni, Annapurna; Liu, Xin; He, Weiming; Roorkiwal, Manish; Yang, Wei; Jian, Jianbo; Doddamani, Dadakhalandar; Gaur, Pooran M.; Rathore, Abhishek; Samineni, Srinivasan; Saxena, Rachit K.; Xu, Dawen; Singh, Narendra P.; Chaturvedi, Sushil K.; Zhang, Gengyun; Wang, Jun; Datta, Swapan K.; Xu, Xun; Varshney, Rajeev K.

    2016-01-01

    In order to understand the impact of breeding on genetic diversity and gain insights into temporal trends in diversity in chickpea, a set of 100 chickpea varieties released in 14 countries between 1948 and 2012 were re-sequenced. For analysis, the re-sequencing data for 29 varieties available from an earlier study was also included. Copy number variations and presence absence variations identified in the present study have potential to drive phenotypic variations for trait improvement. Re-sequencing of a large number of varieties has provided opportunities to inspect the genetic and genomic changes reflecting the history of breeding, which we consider as breeding signatures and the selected loci may provide targets for crop improvement. Our study also reports enhanced diversity in both desi and kabuli varieties as a result of recent chickpea breeding efforts. The current study will aid the explicit efforts to breed for local adaptation in the context of anticipated climate changes. PMID:27982107

  15. Simulation of a He II Lyman-alpha soft x-ray laser pumped by DESY/XFEL radiation

    NASA Astrophysics Data System (ADS)

    Lan, Ke; Fill, Ernst E.; Meyer-ter-Vehn, Jurgen

    2003-12-01

    The high brilliance expected from the X-ray Free-Electron Lasers (XFEL"s) now under construction suggest re-investigating the feasibility of a photopumped soft X-ray laser. We present simulations of a Lyman-α X-ray laser in hydrogenic He (λ = 30.4 nm) pumped by XFEL radiation with parameters of the TESLA Test Facility, phase II, at DESY/Hamburg. The simulations show that high gain can be achieved at a pump intensity of 1015 W/cm2. The realization of such a laser could provide a better understanding of the physics of photopumped lasers and thus help to develop table-top X-ray lasers.

  16. Monitoring the FLASH Cryomodule Transportation from DESY Hamburg to CEA Saclay: Coupler Contact, Vacuum, Acceleration and Vibration Analysis

    SciTech Connect

    Barbanotti, S.; Bosotti, A.; Fusetti, M.; Michelato, P.; Bertolini, A.; Berry, S.; Dorlot, M.; Madec, C.; Napoly, O.; Amirikas, R.; Boehnert, M.; /DESY /Fermilab

    2009-05-01

    With a view to the series production of one hundred, 12 m long XFEL 1.3 GHz cryomodules and their transportation from the assembly site at CEA Saclay (F) to the installation site at DESY Hamburg (D) a test transportation of a FLASH cryomodule has been performed, in the condition foreseen for the mass transportation. The present study examines the stresses induced on the module and verifies the damping capabilities of the transport frame in order to minimize risk of damage to the most critical components. During the transportation, acceleration and vibration have been monitored as well as coupler antenna contacts and vacuum performances. This paper describes the analysis performed and compares those results to the data of a similar transportation study at Fermilab for the CM1 cryomodule.

  17. Recent breeding programs enhanced genetic diversity in both desi and kabuli varieties of chickpea (Cicer arietinum L.).

    PubMed

    Thudi, Mahendar; Chitikineni, Annapurna; Liu, Xin; He, Weiming; Roorkiwal, Manish; Yang, Wei; Jian, Jianbo; Doddamani, Dadakhalandar; Gaur, Pooran M; Rathore, Abhishek; Samineni, Srinivasan; Saxena, Rachit K; Xu, Dawen; Singh, Narendra P; Chaturvedi, Sushil K; Zhang, Gengyun; Wang, Jun; Datta, Swapan K; Xu, Xun; Varshney, Rajeev K

    2016-12-16

    In order to understand the impact of breeding on genetic diversity and gain insights into temporal trends in diversity in chickpea, a set of 100 chickpea varieties released in 14 countries between 1948 and 2012 were re-sequenced. For analysis, the re-sequencing data for 29 varieties available from an earlier study was also included. Copy number variations and presence absence variations identified in the present study have potential to drive phenotypic variations for trait improvement. Re-sequencing of a large number of varieties has provided opportunities to inspect the genetic and genomic changes reflecting the history of breeding, which we consider as breeding signatures and the selected loci may provide targets for crop improvement. Our study also reports enhanced diversity in both desi and kabuli varieties as a result of recent chickpea breeding efforts. The current study will aid the explicit efforts to breed for local adaptation in the context of anticipated climate changes.

  18. Desorption Electrospray Ionization (DESI) Mass Spectrometric Imaging of the Distribution of Rohitukine in the Seedling of Dysoxylum binectariferum Hook. F

    PubMed Central

    Mohana Kumara, Patel; Srimany, Amitava; Arunan, Suganya; Ravikanth, Gudasalamani; Uma Shaanker, Ramanan; Pradeep, Thalappil

    2016-01-01

    Ambient ionization mass spectrometric imaging of all parts of the seedling of Dysoxylum binectariferum Hook. f (Meliaceae) was performed to reconstruct the molecular distribution of rohitukine (Rh) and related compounds. The species accumulates Rh, a prominent chromone alkaloid, in its seeds, fruits, and stem bark. Rh possesses anti-inflammatory, anti-cancer, and immuno-modulatory properties. Desorption electrospray ionization mass spectrometry imaging (DESI MSI) and electrospray ionization (ESI) tandem mass spectrometry (MS/MS) analysis detected Rh as well as its glycosylated, acetylated, oxidized, and methoxylated analogues. Rh was predominantly distributed in the main roots, collar region of the stem, and young leaves. In the stem and roots, Rh was primarily restricted to the cortex region. The identities of the metabolites were assigned based on both the fragmentation patterns and exact mass analyses. We discuss these results, with specific reference to the possible pathways of Rh biosynthesis and translocation during seedling development in D. binectariferum. PMID:27362422

  19. Desorption Electrospray Ionization (DESI) Mass Spectrometric Imaging of the Distribution of Rohitukine in the Seedling of Dysoxylum binectariferum Hook. F.

    PubMed

    Mohana Kumara, Patel; Srimany, Amitava; Arunan, Suganya; Ravikanth, Gudasalamani; Uma Shaanker, Ramanan; Pradeep, Thalappil

    2016-01-01

    Ambient ionization mass spectrometric imaging of all parts of the seedling of Dysoxylum binectariferum Hook. f (Meliaceae) was performed to reconstruct the molecular distribution of rohitukine (Rh) and related compounds. The species accumulates Rh, a prominent chromone alkaloid, in its seeds, fruits, and stem bark. Rh possesses anti-inflammatory, anti-cancer, and immuno-modulatory properties. Desorption electrospray ionization mass spectrometry imaging (DESI MSI) and electrospray ionization (ESI) tandem mass spectrometry (MS/MS) analysis detected Rh as well as its glycosylated, acetylated, oxidized, and methoxylated analogues. Rh was predominantly distributed in the main roots, collar region of the stem, and young leaves. In the stem and roots, Rh was primarily restricted to the cortex region. The identities of the metabolites were assigned based on both the fragmentation patterns and exact mass analyses. We discuss these results, with specific reference to the possible pathways of Rh biosynthesis and translocation during seedling development in D. binectariferum.

  20. Wie wissenschaftlich ist der Evolutionsgedanke?

    NASA Astrophysics Data System (ADS)

    Vollmer, Gerhard

    Darwin war ein besonnener Mann; alles Aufsehen war ihm zuwider. Trotzdem hat er eine Revolution ausgelöst, deren Wirkung nicht auf die Biologie beschränkt blieb. Seine Theorie lässt sich in fünf Teiltheorien zerlegen, die sich durch die Begriffe Artenwandel, Verwandtschaft alles Lebendigen und gemeinsamer Ursprung, Artenaufspaltung und Artenvielfalt, Gradualismus, natürliche Auslese charakterisieren lassen. Dadurch wurden mehrere religiöse und weitere weltanschauliche Überzeugungen in Frage gestellt. Deshalb wird die Evolutionstheorie auch heute noch vielfach kritisiert, ja bekämpft. Die Vorwürfe lassen sich ordnen nach den Kriterien, mit denen wir erfahrungswissenschaftliche Theorien beurteilen. Haltbar ist daran nur, dass es für die Evolutionstheorie zwar beliebig viele Bestätigungen gibt, aber nur wenige Widerlegungsmöglichkeiten. Durch die neuerdings entwickelten und durchgeführten Evolutionsexperimente ist die empirische Situation allerdings deutlich besser geworden. Am (erfahrungs)wissenschaftlichen Charakter der Evolutionstheorie besteht deshalb kein Zweifel.

  1. Rapid determination of the tumour stroma ratio in squamous cell carcinomas with desorption electrospray ionization mass spectrometry (DESI-MS): a proof-of-concept demonstration.

    PubMed

    Woolman, Michael; Tata, Alessandra; Dara, Delaram; Meens, Jalna; D'Arcangelo, Elisa; Perez, Consuelo J; Saiyara Prova, Shamina; Bluemke, Emma; Ginsberg, Howard J; Ifa, Demian; McGuigan, Alison; Ailles, Laurie; Zarrine-Afsar, Arash

    2017-08-21

    Squamous cell carcinomas constitute a major class of head & neck cancers, where the tumour stroma ratio (TSR) carries prognostic information. Patients affected by stroma-rich tumours exhibit a poor prognosis and a higher chance of relapse. As such, there is a need for a technology platform that allows rapid determination of the tumour stroma ratio. In this work, we provide a proof-of-principle demonstration that Desorption Electrospray Ionization Mass Spectrometry (DESI-MS) can be used to determine tumour stroma ratios. Slices from three independent mouse xenograft tumours from the human FaDu cell line were subjected to DESI-MS imaging, staining and detailed analysis using digital pathology methods. Using multivariate statistical methods we compared the MS profiles with those of isolated stromal cells. We found that m/z 773.53 [PG(18:1)(18:1) - H](-), m/z 835.53 [PI(34:1) - H](-) and m/z 863.56 [PI(18:1)(18:0) - H](-) are biomarker ions that can distinguish FaDu cancer from cancer associated fibroblast (CAF) cells. A comparison with DESI-MS analysis of controlled mixtures of the CAF and FaDu cells showed that the abundance of the biomarker ions above can be used to determine, with an error margin of close to 5% compared with quantitative pathology estimates, TSR values. This proof-of-principle demonstration is encouraging and must be further validated using human samples and a larger sample base. At maturity, DESI-MS thus may become a stand-alone molecular pathology tool providing an alternative rapid cancer assessment without the need for time-consuming staining and microscopy methods, potentially further conserving human resources.

  2. Electrospun Nanofiber Mats as "Smart Surfaces" for Desorption Electrospray Ionization Mass Spectrometry (DESI MS)-Based Analysis and Imprint Imaging.

    PubMed

    Hemalatha, R G; Ganayee, Mohd Azhardin; Pradeep, T

    2016-06-07

    In this paper, desorption electrospray ionization mass spectrometry (DESI MS)-based molecular analysis and imprint imaging using electrospun nylon-6 nanofiber mats are demonstrated for various analytical contexts. Uniform mats of varying thicknesses composed of ∼200 nm diameter fibers were prepared using needleless electrospinning. Analytical applications requiring rapid understanding of the analytes in single drops, dyes, inks, and/or plant extracts incorporated directly into the nanofibers are discussed with illustrations. The possibility to imprint patterns made of printing inks, plant parts (such as petals, leaves, and slices of rhizomes), and fungal growth on fruits with their faithful reproductions on the nanofiber mats is illustrated with suitable examples. Metabolites were identified by tandem mass spectrometry data available in the literature and in databases. The results highlight the significance of electrospun nanofiber mats as smart surfaces to capture diverse classes of compounds for rapid detection or to imprint imaging under ambient conditions. Large surface area, appropriate chemical functionalities exposed, and easiness of desorption due to weaker interactions of the analyte species are the specific advantages of nanofibers for this application.

  3. Acid-catalyzed Reactions in Model Secondary Organic Aerosol (SOA): Insights using Desorption-electrospray Ionization (DESI) Tandem Mass Spectrometry

    NASA Astrophysics Data System (ADS)

    Fiddler, M. N.; Cooks, R. G.; Shepson, P.

    2008-12-01

    Atmospheric aerosols are presently little understood in terms of their sources, formation, and effect on climate forcing, despite their significant impacts on climate change and respiratory health. Secondary organic aerosols (SOA), which were thought to arise entirely from simple gas-particle partitioning, have recently been found to contain oligomeric species which result from the condensed-phase reactions of volatile organic compounds (VOCs). The non-methane VOC with the greatest emission flux, isoprene, is known to produce aerosols through chemistry involving its oxidation products. We selected one of its major oxidation product, methacrolein, to assess its role in oligomeric SOA formation in response to the acidic conditions found in cloud water. Since it has been found that acidified aerosol produces oligomeric species with greater molecular weight and yield, acid-catalyzed oligomerization is likely a significant process in the formation of SOA. Aqueous solutions of methacrolein were acidified with sulfuric acid, and studied using linear ion trap mass spectrometry (LIT-MS) with a home-built desorption-electrospray ionization (DESI) source. An extremely heterogeneous mixture of products was produced in this system, resulting from hydrolysis, acid- catalyzed oxidation, reduction, and organosulfate formation. Evidence for disproportionation and heterocycle formation are proposed as reaction mechanisms hitherto unrecognized in the production of SOA. The proposed structure and formation mechanism for several species, based upon their MS/MS spectra, will also be presented.

  4. Tuning of 2.998 GHz S-band hybrid buncher for injector upgrade of LINAC II at DESY

    NASA Astrophysics Data System (ADS)

    Nie, Y. C.; Liebig, C.; Hüning, M.; Schmitz, M.

    2014-10-01

    The injector upgrade of LINAC II at DESY aims to improve its reliability and mitigate the radiological activation of components due to electron loss at relatively high energy of hundreds of MeV. Therefore, a 2.998 GHz hybrid buncher has been developed and will be installed in between an existing 2.998 GHz pre-buncher and LINAC II. It comprises a 1-cell standing-wave (SW) section for rapid electron acceleration and a 13-cells traveling-wave (TW) section for further beam bunching and acceleration. This paper focuses on its radio-frequency tuning procedure. The tuning strategy combines a non-resonant bead-pull measurement of complex electric field and a linear model for local reflection coefficient calculation. It is demonstrated that imaginary part of the local reflection coefficient represents the field distribution straightforwardly, based on which the structure can be tuned from cell to cell. During tuning, special attention has been paid to the field enhancement in the SW section to ensure its beam-capturing capability. Field amplitude and phase, global and local reflection coefficients have been analyzed for two different frequencies simultaneously, i.e. the intrinsic frequency of the structure and the target frequency, to avoid over-tuning. The tuning result is satisfying. For the target frequency, field unflatness of the TW section has been reduced from ±9% to ±4%, and field in the SW section has been enhanced significantly. Meanwhile, in the TW section, the deviation of phase advances between adjacent cells from the nominal value 120° has been reduced from the range ±5° to ±2°. By using ASTRA simulation, it has been verified that the residual detuning of the structure is acceptable in view of the beam dynamics performance.

  5. Evaluation of the smear layer removal and erosive capacity of EDTA, boric acid, citric acid and desy clean solutions: an in vitro study.

    PubMed

    Turk, Tugba; Kaval, Mehmet Emin; Şen, Bilge Hakan

    2015-09-03

    The purpose of this study was to investigate the smear layer removal and erosive capacity of various irrigation solutions with sequential use of NaOCl on instrumented root canal walls. The root canals of single-rooted teeth were instrumented with ProTaper rotary instrument. Then, the teeth were randomly divided into five experimental groups. The root canals were irrigated with one of the following solutions (5 mL/1 min): 5% EDTA, 5% boric acid (BA), a mixture of BA and CA, 2.5% citric acid (CA) and 5% Desy Clean. After irrigating with 2.5% NaOCl and distilled water, the roots were split into two halves and each half was prepared for SEM examination. Representative photographs were taken from each third at x500 and x1000 magnifications. Double blind scoring was performed by two calibrated observers for smear layer and erosion. The scores were statistically analyzed using Kruskal-Wallis, Dunn's post hoc and Spearman's correlation tests (p = 0.05). There were statistically significant differences among the solutions by means of smear layer and erosion (p < 0.05). While 2.5% CA solution was the most effective solution in removal of smear layer, it was also the most erosive solution (p < 0.05). 5% Desy Clean removed smear layer effectively and caused less erosion. There was a negative, but statistically significant correlation between presence of smear layer and erosion (r = -0.684; p < 0.0001). Desy Clean can be a promising agent as an irrigation solution with optimal smear layer removal capacity and less erosive effects.

  6. Use of intermediate focus for grazing incidence small and wide angle x-ray scattering experiments at the beamline P03 of PETRA III, DESY

    SciTech Connect

    Santoro, G.; Buffet, A.; Döhrmann, R.; Yu, S.; Roth, S. V.; Körstgens, V.; Müller-Buschbaum, P.; Gedde, U.; Hedenqvist, M.

    2014-04-15

    We describe the new experimental possibilities of the micro- and nanofocus X-ray scattering beamline P03 of the synchrotron source PETRA III at DESY, Hamburg (Germany), which arise from experiments with smaller beam sizes in the micrometer range. This beamline has been upgraded recently to perform new kinds of experiments. The use of an intermediate focus allows for reducing the beam size of microfocused hard X-rays while preserving a large working distance between the focusing elements and the focus position. For the first time, this well-known methodology has been employed to grazing incidence small- and wide-angle X-ray scattering (GISAXS/GIWAXS). As examples, we highlight the applications to in situ studies using microfluidic devices in GISAXS geometry as well as the investigation of the crystallinity of thin films in GIWAXS geometry.

  7. The chickpea genomic web resource: visualization and analysis of the desi-type Cicer arietinum nuclear genome for comparative exploration of legumes.

    PubMed

    Misra, Gopal; Priya, Piyush; Bandhiwal, Nitesh; Bareja, Neha; Jain, Mukesh; Bhatia, Sabhyata; Chattopadhyay, Debasis; Tyagi, Akhilesh K; Yadav, Gitanjali

    2014-12-18

    Availability of the draft nuclear genome sequences of small-seeded desi-type legume crop Cicer arietinum has provided an opportunity for investigating unique chickpea genomic features and evaluation of their biological significance. The increasing number of legume genome sequences also presents a challenge for developing reliable and information-driven bioinformatics applications suitable for comparative exploration of this important class of crop plants. The Chickpea Genomic Web Resource (CGWR) is an implementation of a suite of web-based applications dedicated to chickpea genome visualization and comparative analysis, based on next generation sequencing and assembly of Cicer arietinum desi-type genotype ICC4958. CGWR has been designed and configured for mapping, scanning and browsing the significant chickpea genomic features in view of the important existing and potential roles played by the various legume genome projects in mutant mapping and cloning. It also enables comparative informatics of ICC4958 DNA sequence analysis with other wild and cultivated genotypes of chickpea, various other leguminous species as well as several non-leguminous model plants, to enable investigations into evolutionary processes that shape legume genomes. CGWR is an online database offering a comprehensive visual and functional genomic analysis of the chickpea genome, along with customized maps and gene-clustering options. It is also the only plant based web resource supporting display and analysis of nucleosome positioning patterns in the genome. The usefulness of CGWR has been demonstrated with discoveries of biological significance made using this server. The CGWR is compatible with all available operating systems and browsers, and is available freely under the open source license at http://www.nipgr.res.in/CGWR/home.php.

  8. Probing Molecular Associations of Secondary Organic Aerosol (SOA) Samples from CalNex 2010 with Nano-DESI High-Resolution Mass Spectrometry

    NASA Astrophysics Data System (ADS)

    O'Brien, R. E.; Nguyen, T. B.; Laskin, A.; Laskin, J.; Hayes, P. L.; Liu, S.; Jimenez, J. L.; Russell, L. M.; Nizkorodov, S.; Goldstein, A. H.

    2012-12-01

    This project focuses on analyzing the identities of molecules that comprise oligomers in size resolved aerosol fractions. Since oligomers are generally too large and polar to be measured by typical GC/MS analysis, soft ionization with high resolution mass spectrometry is used to extend the range of observable compounds. Samples collected during CalNex 2010 in Bakersfield and Los Angeles and secondary organic aerosol (SOA) produced in a photochemical chamber by photooxidation of diesel (DSL) fuel and isoprene (ISO) under humid, high-NOx conditions have been analyzed with nanospray desorption electrospray ionization (nano-DESI) and a high-resolution Orbitrap mass spectrometer. The nano-DESI is a soft ionization technique that allows molecular ions to be observed and the Orbitrap has sufficient resolution to determine the elemental composition of almost all species above the detection limit. A large fraction of SOA is made up of high molecular weight oligomers which are thought to form through acid catalyzed reactions of photo-chemically processed volatile organic compounds (VOC). The formation of oligomers is influenced by the VOCs available, the amount of atmospheric sulfate and nitrate, and the magnitude of photo-chemical processing, among other potential influences. We present the elemental composition of chemical species in size resolved SOA samples with six-hour time resolution, providing the first time resolved data set for the study of these oligomers in atmospheric samples. We present a comparison of the degree of overlap between the ambient and chamber experiments as a novel method to examine sources for this fraction of SOA. Possible formation pathways and sources of observed compounds are analyzed by comparison to other concurrent measurements at the site.

  9. The diagnostic utility of 3D-ESI rotating and moving dipole methodology in the pre-surgical evaluation of MRI-negative childhood epilepsy due to focal cortical dysplasia.

    PubMed

    Russo, Angelo; Lallas, Matt; Jayakar, Prasanna; Miller, Ian; Hyslop, Ann; Dunoyer, Catalina; Resnick, Trevor; Duchowny, Michael

    2016-09-01

    This study investigates whether a combined rotating dipole (RD) and moving dipole (MD) solution enhances three-dimensional electroencephalography (EEG) source imaging (3D-ESI) localization in magnetic resonance imaging (MRI)-negative pediatric patients with focal cortical dysplasia (FCD). We retrospectively selected 14 MRI-negative patients with FCD from a cohort of 60 pediatric patients previously used to evaluate the diagnostic utility of 3D-ESI in epilepsy surgery. Patients were younger than 18 years at time of surgery and had at least 1 year of outcome data. RD and MD models were constructed for each interictal spike or sharp wave, and it was determined whether each inverse algorithm localized within the surgical resection cavity (SRC). We also compared the 3D-ESI findings and surgical outcome with positron emission tomography (PET) and ictal single photon emission computed tomography (iSPECT). RD analyses revealed a high concordance with the SRC (78.6%), particularly for temporal lobe resection (100.0%), and showed superior localization compared to PET and iSPECT, with the highest correlation in FCD type I and temporal lobe resection. Furthermore, the RD method was superior to iSPECT in FCD type II cases and to PET in extratemporal resections. RD and MD results were comparable, but in 18.2% of patients with FCD type I with localizing RDs, the MD solution was only partially within the SRC; in all of these patients 3D-ESI also correlated with superior surgical outcome compared to PET and iSPECT, especially when RD and MD solutions were analyzed together. 3D-ESI in MRI-negative cases showed superior localization compared to iSPECT or PET, especially in FCD type I and temporal lobe epilepsy, and correlated with superior surgical outcome compared to iSPECT and PET at 1 year and 2 years postoperatively, especially when RD and MD solutions were analyzed together. These findings suggest that 3D-ESI based on a combined RD-MD solution improves surgical accuracy in

  10. Effect of dehusking and cooking on protein and dietary fibre of different genotypes of desi, kabuli and green type chickpeas (Cicer arietinum).

    PubMed

    Vasishtha, Hina; Srivastava, Rajendra P; Verma, Prasoon

    2014-12-01

    Dehusking and cooking are essential and important component of processing of chickpea to enhance the digestibility of essential nutrients of grains. Protein and dietary fibres are important due to their role in lowering plasma cholesterol and other health advantages. Changes during dehusking and dehusking followed by cooking on soluble protein, cellulose, hemicellulose, lignin and pectin contents of four genotypes of desi type (BG 256, JG 74, KWR 108 and DCP 92-3), four genotypes of kabuli type (BG 1053, KAK 2, JKG 1 and L 550) and two genotypes of green type (Sadabahar and BDG 112) of chickpeas (Cicer arietinum) were studied. The cellulose, hemicellulose and lignin of grain decreased to an extent of 21.6 %, 29.6 % and 27.3 % respectively on dehusking, whereas pectin recorded an increase of 26.2 % on dehusking. The cooking of dehusked grain registered a marginal increase in cellulose, lignin and pectin, but a decrease in hemicellulose content. The soluble protein recorded an increase of 21.3 % on dehusking and 26.6 % increase on cooking, as compared to unprocessed grain.

  11. High throughput screening of high-affinity ligands for proteins with anion-binding sites using desorption electrospray ionization (DESI) mass spectrometry.

    PubMed

    Lu, Xin; Ning, Baoming; He, Dacheng; Huang, Lingyun; Yue, Xiangjun; Zhang, Qiming; Huang, Haiwei; Liu, Yang; He, Lan; Ouyang, Jin

    2014-03-01

    A high throughput screening system involving a linear ion trap (LTQ) analyzer, a house-made platform and a desorption electrospray ionization (DESI) source was established to screen ligands with a high affinity for proteins with anion-binding sites. The complexes were analyzed after incubation, ultrafiltration, washing, and displacement. A new anionic region inhibited dissociation (ARID) mechanism that was suitable for a protein with anion-binding site was proposed. We utilized the differences in detectable dissociation of protein-ligand complexes, combined with displacement experiments, to distinguish free ligands displaced from anion-binding sites from liberated ligands dissociated from nonspecific interactions. The method was validated by α1-acid glycoprotein (AGP) and (R), (S)-amlodipine. Site-specific enantioselectivity shown in our experiments was consistent with earlier studies. Obtaining all of the qualitative information of 15*3 samples in 2.3 min indicates that the analysis process is no longer the time-limiting step in the initial stage of drug discovery. Quantitative information verified that our method was at least a semiquantitative method.

  12. High Throughput Screening of High-Affinity Ligands for Proteins with Anion-Binding Sites using Desorption Electrospray Ionization (DESI) Mass Spectrometry

    NASA Astrophysics Data System (ADS)

    Lu, Xin; Ning, Baoming; He, Dacheng; Huang, Lingyun; Yue, Xiangjun; Zhang, Qiming; Huang, Haiwei; Liu, Yang; He, Lan; Ouyang, Jin

    2014-03-01

    A high throughput screening system involving a linear ion trap (LTQ) analyzer, a house-made platform and a desorption electrospray ionization (DESI) source was established to screen ligands with a high affinity for proteins with anion-binding sites. The complexes were analyzed after incubation, ultrafiltration, washing, and displacement. A new anionic region inhibited dissociation (ARID) mechanism that was suitable for a protein with anion-binding site was proposed. We utilized the differences in detectable dissociation of protein-ligand complexes, combined with displacement experiments, to distinguish free ligands displaced from anion-binding sites from liberated ligands dissociated from nonspecific interactions. The method was validated by α1-acid glycoprotein (AGP) and (R), (S)-amlodipine. Site-specific enantioselectivity shown in our experiments was consistent with earlier studies. Obtaining all of the qualitative information of 15*3 samples in 2.3 min indicates that the analysis process is no longer the time-limiting step in the initial stage of drug discovery. Quantitative information verified that our method was at least a semiquantitative method.

  13. Probing Molecular Associations of Field-Collected and Laboratory-Generated SOA with Nano-DESI High-Resolution Mass Spectrometry

    SciTech Connect

    O'Brien, Rachel E.; Nguyen, Tran B.; Laskin, Alexander; Laskin, Julia; Hayes, Patrick L.; Liu, Shang; Jimenez, Jose L.; Russell, Lynn M.; Nizkorodov, Sergey; Goldstein, Allen H.

    2013-01-30

    Aerosol samples from the 2010 CalNex field study in Bakersfield (BF) and Los Angeles (LA) were analyzed using positive mode nanospray-desorption electrospray ionization mass spectrometry (nano-DESI-MS). Secondary organic aerosol (SOA) produced in a photochemical chamber by photooxidation of diesel (DSL) fuel and isoprene (ISO) under humid, high-NOx conditions, was analyzed for comparison. Three groups of organic compounds with zero, one, or two nitrogen atoms in their molecular formulas (0N, 1N, 2N) were compared in detail. The composition of ambient SOA exhibited greater overlap with DSL than with ISO. The overlap of the chamber experiments with the BF data was relatively consistent throughout the day while the overlap with LA data increased significantly in the noon-6pm sample, consistent with the SOA plume arriving from downtown Los Angeles. BF samples were more oxidized, contained more organic nitrogen, and had more overlap with the chamber data compared to LA samples. The addition of gaseous ammonia (NH3) to the DSL experiment was necessary to generate many of the 2N compounds observed in BF. This analysis demonstrates that DSL and ISO were important sources but cannot account for all of the observed ambient compounds indicating that other sources of organics were also likely important.

  14. Spatially resolved investigation of systemic and contact pesticides in plant material by desorption electrospray ionization mass spectrometry imaging (DESI-MSI).

    PubMed

    Gerbig, Stefanie; Brunn, Hubertus E; Spengler, Bernhard; Schulz, Sabine

    2015-09-01

    Distribution of pesticides both on the surface of leaves and in cross sections of plant stem and leaves was investigated using desorption electrospray ionization mass spectrometry imaging (DESI-MSI) with a spatial resolution of 50-100 μm. Two commercially available insecticide sprays containing different contact pesticides were applied onto leaves of Cotoneaster horizontalis, and the distributions of all active ingredients were directly analyzed. The first spray contained pyrethrins and rapeseed oil, both known as natural insecticides. Each component showed an inhomogeneous spreading throughout the leaf, based on substance polarity and solubility. The second spray contained the synthetic insecticides imidacloprid and methiocarb. Imidacloprid accumulated on the border of the leaf, while methiocarb was distributed more homogenously. In order to investigate the incorporation of a systemically acting pesticide into Kalanchoe blossfeldiana, a commercially available insecticide tablet containing dimethoate was spiked to the soil of the plant. Cross sections of the stem and leaf were obtained 25 and 60 days after application. Dimethoate was mainly detected in the transport system of the plant after 25 days, while it was found to be homogenously distributed in a leaf section after 60 days.

  15. Versatile sample environments and automation for biological solution X-ray scattering experiments at the P12 beamline (PETRA III, DESY).

    PubMed

    Blanchet, Clement E; Spilotros, Alessandro; Schwemmer, Frank; Graewert, Melissa A; Kikhney, Alexey; Jeffries, Cy M; Franke, Daniel; Mark, Daniel; Zengerle, Roland; Cipriani, Florent; Fiedler, Stefan; Roessle, Manfred; Svergun, Dmitri I

    2015-04-01

    A high-brilliance synchrotron P12 beamline of the EMBL located at the PETRA III storage ring (DESY, Hamburg) is dedicated to biological small-angle X-ray scattering (SAXS) and has been designed and optimized for scattering experiments on macromolecular solutions. Scatterless slits reduce the parasitic scattering, a custom-designed miniature active beamstop ensures accurate data normalization and the photon-counting PILATUS 2M detector enables the background-free detection of weak scattering signals. The high flux and small beam size allow for rapid experiments with exposure time down to 30-50 ms covering the resolution range from about 300 to 0.5 nm. P12 possesses a versatile and flexible sample environment system that caters for the diverse experimental needs required to study macromolecular solutions. These include an in-vacuum capillary mode for standard batch sample analyses with robotic sample delivery and for continuous-flow in-line sample purification and characterization, as well as an in-air capillary time-resolved stopped-flow setup. A novel microfluidic centrifugal mixing device (SAXS disc) is developed for a high-throughput screening mode using sub-microlitre sample volumes. Automation is a key feature of P12; it is controlled by a beamline meta server, which coordinates and schedules experiments from either standard or nonstandard operational setups. The integrated SASFLOW pipeline automatically checks for consistency, and processes and analyses the data, providing near real-time assessments of overall parameters and the generation of low-resolution models within minutes of data collection. These advances, combined with a remote access option, allow for rapid high-throughput analysis, as well as time-resolved and screening experiments for novice and expert biological SAXS users.

  16. Versatile sample environments and automation for biological solution X-ray scattering experiments at the P12 beamline (PETRA III, DESY)

    PubMed Central

    Blanchet, Clement E.; Spilotros, Alessandro; Schwemmer, Frank; Graewert, Melissa A.; Kikhney, Alexey; Jeffries, Cy M.; Franke, Daniel; Mark, Daniel; Zengerle, Roland; Cipriani, Florent; Fiedler, Stefan; Roessle, Manfred; Svergun, Dmitri I.

    2015-01-01

    A high-brilliance synchrotron P12 beamline of the EMBL located at the PETRA III storage ring (DESY, Hamburg) is dedicated to biological small-angle X-ray scattering (SAXS) and has been designed and optimized for scattering experiments on macromolecular solutions. Scatterless slits reduce the parasitic scattering, a custom-designed miniature active beamstop ensures accurate data normalization and the photon-counting PILATUS 2M detector enables the background-free detection of weak scattering signals. The high flux and small beam size allow for rapid experiments with exposure time down to 30–50 ms covering the resolution range from about 300 to 0.5 nm. P12 possesses a versatile and flexible sample environment system that caters for the diverse experimental needs required to study macromolecular solutions. These include an in-vacuum capillary mode for standard batch sample analyses with robotic sample delivery and for continuous-flow in-line sample purification and characterization, as well as an in-air capillary time-resolved stopped-flow setup. A novel microfluidic centrifugal mixing device (SAXS disc) is developed for a high-throughput screening mode using sub-microlitre sample volumes. Automation is a key feature of P12; it is controlled by a beamline meta server, which coordinates and schedules experiments from either standard or nonstandard operational setups. The integrated SASFLOW pipeline automatically checks for consistency, and processes and analyses the data, providing near real-time assessments of overall parameters and the generation of low-resolution models within minutes of data collection. These advances, combined with a remote access option, allow for rapid high-throughput analysis, as well as time-resolved and screening experiments for novice and expert biological SAXS users. PMID:25844078

  17. Calibration of the radiation monitors from DESY and SPring-8 at the quasi-mono-energetic neutron beams using 100 and 300 MeV 7Li(p,n) reaction at RCNP in Osaka Japan in November 2014

    NASA Astrophysics Data System (ADS)

    Leuschner, Albrecht; Asano, Yoshihiro; Klett, Alfred

    2017-09-01

    At the ring cyclotron facility of the Research Center for Nuclear Physics (RCNP) Osaka University, Osaka, Japan a series of measurement campaigns had been continued with quasi mono-energetic neutron beams in November 2014. A 7Li target was bombarded with 100 and 300 MeV protons and the generated neutron beams were directed into a long time-of-flight tunnel at 0 and 25 degrees deflection angle with respect to the proton beam. At a distance of 41 m the cross section of the neutron beam was large enough for the illumination of square meter sized objects like extended range rem-counters. The research institutes SPring-8/RIKEN, Japan, and DESY, Germany, participated in this campaign for the calibration of 4 different types of active ambient dose rate monitors: LB 6411, LB 6411-Pb, LB 6419 and LB 6420. The measurements of their responses are reported and compared with the calculated values.

  18. H - ion source activities at DESY

    NASA Astrophysics Data System (ADS)

    Peters, J.

    1994-04-01

    The H- source for HERA is based on the design of that at FNAL. It was modified according to the Deutsches Elektronen-Synchrotron requirements. There is only one H- source connected to the H- LINAC. It must run for long uninterrupted periods with a low duty factor and a high reliability. The measured cesium distribution showed that it is necessary to keep the cold box as a barrier. The operation of the cold box was improved with a new type of high voltage insulator and a special protection against condensation at the feedthrough for high voltage and -30 °C freon. The bending magnet of the cold box will be further improved by using a permanent magnet instead of the electromagnet. A unit was designed that includes all the essential elements which are under vacuum. It can be replaced in minutes and contains a newly designed H2 piezovalve and a remodeled magnetron. The cathode of the magnetron can be heated. It is now possible to run at a low repetition rate of 1/4 Hz and thus reduce Cs and H2 consumption.

  19. Long Term Stability of Coriolis Flow Meters: DESY experience

    NASA Astrophysics Data System (ADS)

    Boeckmann, T.; Bozhko, Y.; Escherich, K.; Petersen, B.; Putselyk, S.; Schnautz, T.; Sellmann, D.; Zhirnov, A.

    2017-02-01

    The measurement of coolant flow is important operational parameter for reliable operation of cryogenic system with superconducting magnets or cavities as well as for the system diagnostics in case of non-steady-state operation, e.g. during cool-down/warm-up or other transients. Proper flowmeter is chosen according to the different parameters, e.g. turn-down, operating temperature range, leak-tightness, pressure losses, long-term stability, etc. For helium cryogenics, the Venturi tube or Orifice, as well as Coriolis flow meters are often applied. For the present time, the orifices are usually used due to their simplicity and low costs, however, low turn-down range, large pressure drop, restriction of flow area, susceptibility to thermoacoustic oscillations limit their useful operation range. Operational characteristics of Venturi tubes is substantially improved in comparison to orifices, however, relative high costs and susceptibility to thermoacoustic oscillations still limit their application to special cases. The Coriolis flow meters do not have typical drawbacks of Venturi tube and orifices, however long-term stability over many years was not demonstrated yet. This paper describes the long-term behaviour of Coriolis flow meters after many years of operation at AMTF and XMTS facilities.

  20. The NEW DESY RF-Driven Multicusp H- Ion Source

    NASA Astrophysics Data System (ADS)

    Peters, J.

    2009-03-01

    The HERA RF-Volume source is the only source that can deliver a H- current of 40 mA without Cs routinely and for periods of several years. Step by step improvements have led to a completely new design. The plasma is now contained in an Al2O3 ceramic chamber and has no contact to metal surfaces except for the collar. The sensitive antenna and also the pair of filter magnets are outside of the plasma. The plasma chamber is mounted in a ceramic disk for high voltage insulation. The ignition of the plasma is done with an ignition source utilizing the higher pressure at the gas input. Details about the setup, performance, H+ containment, sparking suppression and experience with a new 10 cm diameter LEBT will be given.

  1. Hostile Times: Desi College Students Cope with Hate

    ERIC Educational Resources Information Center

    Isler, Hilal Nakiboglu

    2006-01-01

    The attacks of terror carried out on September 11, 2001 gave rise to waves of hate-fueled violence across the country. It has been argued that the attacks and the subsequent, current context of war have resulted in a heightened sense of American intolerance. They have led to discernable shifts in how certain minorities are perceived and treated in…

  2. Lifelong Learning in the Information Age: Organizing Net-Based Learning and Teaching Systems. Wissenschaftliche Fachbibliothek.

    ERIC Educational Resources Information Center

    Finke, Wolfgang F.

    This book examines lifelong learning in the Information Age and the role of higher education (HE) in providing the educational services needed by lifelong learners. The following are among the topics discussed in the book's eight chapters: (1) changes in HE (repercussions of globalization in the educational sector; competition in higher learning;…

  3. Lifelong Learning in the Information Age: Organizing Net-Based Learning and Teaching Systems. Wissenschaftliche Fachbibliothek.

    ERIC Educational Resources Information Center

    Finke, Wolfgang F.

    This book examines lifelong learning in the Information Age and the role of higher education (HE) in providing the educational services needed by lifelong learners. The following are among the topics discussed in the book's eight chapters: (1) changes in HE (repercussions of globalization in the educational sector; competition in higher learning;…

  4. One drop chemical derivatization--DESI-MS analysis for metabolite structure identification.

    PubMed

    Lubin, Arnaud; Cabooter, Deirdre; Augustijns, Patrick; Cuyckens, Filip

    2015-07-01

    Structural elucidation of metabolites is an important part during the discovery and development process of new pharmaceutical drugs. Liquid Chromatography (LC) in combination with Mass Spectrometry (MS) is usually the technique of choice for structural identification but cannot always provide precise structural identification of the studied metabolite (e.g. site of hydroxylation and site of glucuronidation). In order to identify those metabolites, different approaches are used combined with MS data including nuclear magnetic resonance, hydrogen/deuterium exchange and chemical derivatization followed by LC-MS. Those techniques are often time-consuming and/or require extra sample pre-treatment. In this paper, a fast and easy to set up tool using desorption electrospray ionization-MS for metabolite identification is presented. In the developed method, analytes in solution are simply dried on a glass plate with printed Teflon spots and then a single drop of derivatization mixture is added. Once the spot is dried, the derivatized compound is analyzed. Six classic chemical derivatizations were adjusted to work as a one drop reaction and applied on a list of compounds with relevant functional groups. Subsequently, two successive reactions on a single spot of amoxicillin were tested and the methodology described was successfully applied on an in vitro incubated alprazolam metabolite. All reactions and analyses were performed within an hour and gave useful structural information by derivatizing functional groups, making the method a time-saving and efficient tool for metabolite identification if used in addition or in some cases as an alternative to common methods.

  5. Dynamic Electrical Source Imaging (DESI) of Seizures and Interictal Epileptic Discharges Without Ensemble Averaging

    PubMed Central

    Erem, Burak; Hyde, Damon E.; Peters, Jurriaan M.; Duffy, Frank H.; Warfield, Simon K.

    2016-01-01

    We propose an algorithm for electrical source imaging of epileptic discharges that takes a data-driven approach to regularizing the dynamics of solutions. The method is based on linear system identification on short time segments, combined with a classical inverse solution approach. Whereas ensemble averaging of segments or epochs discards inter-segment variations by averaging across them, our approach explicitly models them. Indeed, it may even be possible to avoid the need for the time-consuming process of marking epochs containing discharges altogether. We demonstrate that this approach can produce both stable and accurate inverse solutions in experiments using simulated data and real data from epilepsy patients. In an illustrative example, we show that we are able to image propagation using this approach. We show that when applied to imaging seizure data, our approach reproducibly localized frequent seizure activity to within the margins of surgeries that led to patients’ seizure freedom. The same approach could be used in the planning of epilepsy surgeries, as a way to localize potentially epileptogenic tissue that should be resected. PMID:27479957

  6. Monitoring System for the GRID Monte Carlo Mass Production in the H1 Experiment at DESY

    NASA Astrophysics Data System (ADS)

    Bystritskaya, Elena; Fomenko, Alexander; Gogitidze, Nelly; Lobodzinski, Bogdan

    2014-06-01

    The H1 Virtual Organization (VO), as one of the small VOs, employs most components of the EMI or gLite Middleware. In this framework, a monitoring system is designed for the H1 Experiment to identify and recognize within the GRID the best suitable resources for execution of CPU-time consuming Monte Carlo (MC) simulation tasks (jobs). Monitored resources are Computer Elements (CEs), Storage Elements (SEs), WMS-servers (WMSs), CernVM File System (CVMFS) available to the VO HONE and local GRID User Interfaces (UIs). The general principle of monitoring GRID elements is based on the execution of short test jobs on different CE queues using submission through various WMSs and directly to the CREAM-CEs as well. Real H1 MC Production jobs with a small number of events are used to perform the tests. Test jobs are periodically submitted into GRID queues, the status of these jobs is checked, output files of completed jobs are retrieved, the result of each job is analyzed and the waiting time and run time are derived. Using this information, the status of the GRID elements is estimated and the most suitable ones are included in the automatically generated configuration files for use in the H1 MC production. The monitoring system allows for identification of problems in the GRID sites and promptly reacts on it (for example by sending GGUS (Global Grid User Support) trouble tickets). The system can easily be adapted to identify the optimal resources for tasks other than MC production, simply by changing to the relevant test jobs. The monitoring system is written mostly in Python and Perl with insertion of a few shell scripts. In addition to the test monitoring system we use information from real production jobs to monitor the availability and quality of the GRID resources. The monitoring tools register the number of job resubmissions, the percentage of failed and finished jobs relative to all jobs on the CEs and determine the average values of waiting and running time for the involved GRID queues. CEs which do not meet the set criteria can be removed from the production chain by including them in an exception table. All of these monitoring actions lead to a more reliable and faster execution of MC requests.

  7. Vibration measurements of high-heat-load monochromators for DESY PETRA III extension

    PubMed Central

    Kristiansen, Paw; Horbach, Jan; Döhrmann, Ralph; Heuer, Joachim

    2015-01-01

    The requirement for vibrational stability of beamline optics continues to evolve rapidly to comply with the demands created by the improved brilliance of the third-generation low-emittance storage rings around the world. The challenge is to quantify the performance of the instrument before it is installed at the beamline. In this article, measurement techniques are presented that directly and accurately measure (i) the relative vibration between the two crystals of a double-crystal monochromator (DCM) and (ii) the absolute vibration of the second-crystal cage of a DCM. Excluding a synchrotron beam, the measurements are conducted under in situ conditions, connected to a liquid-nitrogen cryocooler. The investigated DCM utilizes a direct-drive (no gearing) goniometer for the Bragg rotation. The main causes of the DCM vibration are found to be the servoing of the direct-drive goniometer and the flexibility in the crystal cage motion stages. It is found that the investigated DCM can offer relative pitch vibration down to 48 nrad RMS (capacitive sensors, 0–5 kHz bandwidth) and absolute pitch vibration down to 82 nrad RMS (laser interferometer, 0–50 kHz bandwidth), with the Bragg axis brake engaged. PMID:26134790

  8. Vibration measurements of high-heat-load monochromators for DESY PETRA III extension.

    PubMed

    Kristiansen, Paw; Horbach, Jan; Döhrmann, Ralph; Heuer, Joachim

    2015-07-01

    The requirement for vibrational stability of beamline optics continues to evolve rapidly to comply with the demands created by the improved brilliance of the third-generation low-emittance storage rings around the world. The challenge is to quantify the performance of the instrument before it is installed at the beamline. In this article, measurement techniques are presented that directly and accurately measure (i) the relative vibration between the two crystals of a double-crystal monochromator (DCM) and (ii) the absolute vibration of the second-crystal cage of a DCM. Excluding a synchrotron beam, the measurements are conducted under in situ conditions, connected to a liquid-nitrogen cryocooler. The investigated DCM utilizes a direct-drive (no gearing) goniometer for the Bragg rotation. The main causes of the DCM vibration are found to be the servoing of the direct-drive goniometer and the flexibility in the crystal cage motion stages. It is found that the investigated DCM can offer relative pitch vibration down to 48 nrad RMS (capacitive sensors, 0-5 kHz bandwidth) and absolute pitch vibration down to 82 nrad RMS (laser interferometer, 0-50 kHz bandwidth), with the Bragg axis brake engaged.

  9. Längengrad. Die wahre Geschichte eines einsamen Genies, welches das größte wissenschaftliche Problem seiner Zeit löste.

    NASA Astrophysics Data System (ADS)

    Sobel, D.

    This book is a German translation, by M. Fienbork, from the American original "Longitude", published in 1995. It tells the story of John Harrison (1693 - 1776), the inventor of a chronometer for precise time determination onboard of ships.

  10. 25 Jahre - Institut fuer Geodaesie, Teil 1: Wissenschaftliche Beitraege und Berichte (25 Years - Institute of Geodesy, Part 1: Scientific Contributions and Reports)

    DTIC Science & Technology

    2000-01-01

    des Dispersionswinkels zur Bestimmung der Refraktion. AVN 100, S. 51-62, 1993 HAMMING, R., W.: Digitale Filter. VCH-Verlag, Weinheim 1987 HAMPEL, F...KRONMOLLER, H.: Digitale Signalverarbeitung. Springer-Verlag, Berlin 1991 KUHLMANN, H.: Ein Beitrag zur Oberwachung von Briickenbauwerken mit...1987), das Europdische Referenzsystem - EUREF (SEEGER/ALTINER/ENGELHARDT/FRANKE/HABRICH/SCHLC- TER 1998) und das Sistema di Referencia del America del

  11. Desi Women on the Forty Acres: Exploring Intergenerational Issues and Identity Development of South Asian American College Students

    ERIC Educational Resources Information Center

    Ruzicka, Smita Sundaresan

    2011-01-01

    South Asian Americans are one of the fastest growing sub-groups within the Asian American population in the United States today. Between 1960 and 1990, the South Asian American population witnessed an increase of approximately 900% (Leonard, 1997). This increase in population also corresponds with the increase in South Asian American students…

  12. Rapid Analysis of Chemical Warfare Agents and Their Hydrolysis Products by Desorption Electrospray Ionization Mass Spectrometry (DESI-MS)

    DTIC Science & Technology

    2009-10-01

    of chemical warfare agents in natural water samples by solid-phase microextraction. Anal. Chem., 69, 1866-72. [36] Sng , M.T. and Ng ,W.F. (1999). In...liquid phase microextraction of alkylphosphonic acids from water. J. Chromatogr. A., 1141, 151-157. [43] Lee, H.S.N., Sng , M.T., Basheer, C., and Lee

  13. DESI-Detection of early-season invasives (software-installation manual and user's guide version 1.0)

    USGS Publications Warehouse

    Kokaly, Raymond F.

    2011-01-01

    This report describes a software system for detecting early-season invasive plant species, such as cheatgrass. The report includes instructions for installing the software and serves as a user's guide in processing Landsat satellite remote sensing data to map the distributions of cheatgrass and other early-season invasive plants. The software was developed for application to the semi-arid regions of southern Utah; however, the detection parameters can be altered by the user for application to other areas.

  14. Desi Women on the Forty Acres: Exploring Intergenerational Issues and Identity Development of South Asian American College Students

    ERIC Educational Resources Information Center

    Ruzicka, Smita Sundaresan

    2011-01-01

    South Asian Americans are one of the fastest growing sub-groups within the Asian American population in the United States today. Between 1960 and 1990, the South Asian American population witnessed an increase of approximately 900% (Leonard, 1997). This increase in population also corresponds with the increase in South Asian American students…

  15. Development of a scanning transmission x-ray microscope for the beamline P04 at PETRA III DESY

    SciTech Connect

    Andrianov, Konstantin; Ewald, Johannes; Nisius, Thomas; Wilhein, Thomas; Lühl, Lars; Malzer, Wolfgang; Kanngießer, Birgit

    2016-01-28

    We present a scanning transmission x-ray microscope (STXM) built on top of our existing modular platform for high resolution imaging experiments. This platform consists of up to three separate vacuum chambers and custom designed piezo stages. These piezo stages are able to move precisely in x-, y- and z-direction, this makes it possible to adjust the components for different imaging modes. During recent experiments the endstation was operated mainly as a transmission x-ray microscope (TXM) [1, 2].

  16. Scanning Transmission X-ray Microscopy with X-ray Fluorescence Detection at the XUV Beamline P04, PETRA III, DESY

    NASA Astrophysics Data System (ADS)

    Andrianov, K.; Lühl, L.; Nisius, T.; Haidl, A.; Gnewkow, R.; Lötgering, L.; Dierks, H.; Kanngießer, B.; Wilhein, T.

    2017-06-01

    The presented scanning transmission x-ray microscope (STXM), build on top of our existing modular platform (FlexIX) for high resolution imaging experiments, allows versatile investigations of different samples. The FlexIX endstation allows to switch between a Full Field and a STXM mode. For the STXM mode we use a spatialy resolved detector together with an energy dispersive detector, this allows to investigate the morphology and the chemical or elemental distribution of the sample simultaneous. The combination of the nanoscopy endstation and the XUV beamline P04 results in a powerful tool for investigations of life science samples.

  17. Desorption Electrospray Ionization Mass Spectrometry (DESI-MS) Analysis of Organophosphorus Chemical Warfare Agents: Rapid Acquisition of Time-Aligned Parallel (TAP) Fragmentation Data

    DTIC Science & Technology

    2010-06-01

    of surfaces [22, 28-30], polymers [31], alkaloids on plant tissue [32], chemical warfare agents on solid phase microextraction (SPME) fibers [33, 34...phase analysis of industrial polymers. Chem. Commun., 888-890. [32] Talaty, N., Takats, Z. and Cooks, R.G. (2005). Rapid in situ detection of alkaloids

  18. Liquid Chromatography Electrospray Ionization Mass Spectrometric (LC-ESI-MS) and Desorption Electrospray Ionization Mass Spectrometric (DESI-MS) Identification of Chemical Warfare Agents in Consumer Products

    DTIC Science & Technology

    2007-06-01

    au-dessus des 6chantillons de semoule de mais et d’huile de soja ensemenc6s ont &6 6chantillonn6s avec des fibres SPME; ces fibres ont &6 analys6s au...6chantillons d’eau embouteill6e. Les vides au-dessus des 6chantillons de semoule de mais et d’huile de soja ensemencds ont 6t6 6chantillonn~s avec...des fibres SPNM. L’analyse directe des fibres SPME ayant 6t6 exposes dans le vide au-dessus des 6chantillons de la semoule de mais et I’huile de soja

  19. Probing molecular associations of field-collected and laboratory-generated SOA with nano-DESI high-resolution mass spectrometry

    NASA Astrophysics Data System (ADS)

    O'Brien, Rachel E.; Nguyen, Tran B.; Laskin, Alexander; Laskin, Julia; Hayes, Patrick L.; Liu, Shang; Jimenez, Jose L.; Russell, Lynn M.; Nizkorodov, Sergey A.; Goldstein, Allen H.

    2013-01-01

    Aerosol samples from the 2010 CalNex field study in Bakersfield (BF) and Pasadena (LA) were analyzed using positive mode nanospray-desorption electrospray ionization mass spectrometry. Secondary organic aerosol (SOA) produced in a photochemical chamber by photooxidation of diesel (DSL) fuel and isoprene (ISO) under humid, high-NOx conditions, was analyzed for comparison. Three groups of organic compounds with zero, one, or two nitrogen atoms in their molecular formulas (0N, 1N, 2N) were compared in detail. The composition of ambient SOA exhibited greater overlap with DSL than with ISO. The overlap of the chamber experiments with the BF data was relatively consistent throughout the day while the overlap with LA data increased significantly in the noon to 6 P.M. sample, consistent with the SOA plume arriving from downtown Los Angeles. BF samples were more oxidized, contained more organic nitrogen, and had more overlap with the chamber data compared to LA samples. The addition of gaseous ammonia (NH3) to the DSL experiment was necessary to generate many of the 2N compounds observed in BF. This analysis demonstrates that DSL and ISO were important sources but cannot account for all of the observed ambient compounds indicating that other sources of organics were also likely important.

  20. Development and Applications of Liquid Sample Desorption Electrospray Ionization Mass Spectrometry

    NASA Astrophysics Data System (ADS)

    Zheng, Qiuling; Chen, Hao

    2016-06-01

    Desorption electrospray ionization mass spectrometry (DESI-MS) is a recent advance in the field of analytical chemistry. This review surveys the development of liquid sample DESI-MS (LS-DESI-MS), a variant form of DESI-MS that focuses on fast analysis of liquid samples, and its novel analy-tical applications in bioanalysis, proteomics, and reaction kinetics. Due to the capability of directly ionizing liquid samples, liquid sample DESI (LS-DESI) has been successfully used to couple MS with various analytical techniques, such as microfluidics, microextraction, electrochemistry, and chromatography. This review also covers these hyphenated techniques. In addition, several closely related ionization methods, including transmission mode DESI, thermally assisted DESI, and continuous flow-extractive DESI, are briefly discussed. The capabilities of LS-DESI extend and/or complement the utilities of traditional DESI and electrospray ionization and will find extensive and valuable analytical application in the future.

  1. Function of desiccate in gustatory sensilla of drosophila melanogaster

    PubMed Central

    Kawano, Takeshi; Ryuda, Masasuke; Matsumoto, Hitoshi; Ochiai, Masanori; Oda, Yasunori; Tanimura, Teiichi; Csikos, Gyorge; Moriya, Megumi; Hayakawa, Yoichi

    2015-01-01

    Desiccate (Desi), initially discovered as a gene expressing in the epidermis of Drosophila larvae for protection from desiccation stress, was recently found to be robustly expressed in the adult labellum; however, the function, as well as precise expression sites, was unknown. Here, we found that Desi is expressed in two different types of non-neuronal cells of the labellum, the epidermis and thecogen accessory cells. Labellar Desi expression was significantly elevated under arid conditions, accompanied by an increase in water ingestion by adults. Desi overexpression also promoted water ingestion. In contrast, a knockdown of Desi expression reduced feeding as well as water ingestion due to a drastic decrease in the gustatory sensillar sensitivity for all tested tastants. These results indicate that Desi helps protect insects from desiccation damage by not only preventing dehydration through the integument but also accelerating water ingestion via elevated taste sensitivities of the sensilla. PMID:26610608

  2. Das Allgemeine Statistische Archiv

    NASA Astrophysics Data System (ADS)

    Rinne, Horst

    Das Allgemeine Statistische Archiv1, nachfolgend kurz Archiv genannt, ist die älteste, ausschließlich der Statistik gewidmete deutschsprachige wissenschaftliche Fachzeitschrift. Sie ist gut zwanzig Jahre älter als die Deutsche Statistische Gesellschaft, zu deren Publikationsorgan sie mit der Gründung der Gesellschaft im Jahre 1911 wurde. Zeitschrift und Gesellschaft blicken auf eine sehr wechselvolle, aber erfolgreiche gemeinsame Geschichte zurück. Die wissenschaftliche Arbeit der Gesellschaft ist im Archiv und seinen Sonderheften für nachfolgende Generationen dokumentiert.

  3. Desorption electrospray ionization mass spectrometry of intact bacteria

    USDA-ARS?s Scientific Manuscript database

    Desorption electrospray ionization (DESI) mass spectrometry (MS) was used to differentiate 7 bacterial species based on their measured DESI-mass spectral profile. Both Gram positive and Gram negative bacteria were tested and included Escherichia coli, Staphyloccocus aureus, Enterococcus sp., Bordete...

  4. Europäisches Organ der Festkörperforschung und DDR-Devisenbringer Die Zeitschrift Physica Status Solidi im Kalten Krieg

    NASA Astrophysics Data System (ADS)

    Hoffmann, Dieter

    Mit dem Ziele, ein einheitliches internationales Organ der Festkörperphysik für den europäischen Raum zu schaffen, das eine rasche Publikation der für das Festkörpergebiet repräsentative Arbeiten ermöglicht, wird durch ein internationales Herausgebergremium eine neue wissenschaftliche Zeitschrift gegründet.

  5. TÜV - Zertifizierungen in der Life Science Branche

    NASA Astrophysics Data System (ADS)

    Schaff, Peter; Gerbl-Rieger, Susanne; Kloth, Sabine; Schübel, Christian; Daxenberger, Andreas; Engler, Claus

    Life Sciences [1] (Lebenswissenschaften) sind ein globales Innovationsfeld mit Anwendungen der Bio- und Medizinwissenschaften, der Pharma-, Chemie-, Kosmetik- und Lebensmittelindustrie. Diese Branche zeichnet sich durch eine stark interdisziplinäre Ausrichtung aus, mit Anwendung wissenschaftlicher Erkenntnisse und Einsatz von Ausgangsstoffen aus der modernen Biologie, Chemie und Humanmedizin sowie gezielter marktwirtschaftlich orientierter Arbeit.

  6. Meteorite. Urmaterie aus dem interplanetaren Raum.

    NASA Astrophysics Data System (ADS)

    Bühler, R. W.

    Contents: 1. Wie Irrlichter aus irdischen Dünsten. 2. Steine und Eisen aus dem Weltraum. 3. Die Meteoritenfunde in der Antarktis. 4. Einschläge auf die Erde. 5. Staubkörner und Riesenbrocken. 6. Systematik, Mineralogie, Petrologie, Zusammensetzung. 7. Ursprungsorte und wissenschaftliche Bedeutung der Meteorite. 8. Meteorite erkennen und konservieren.9. Meteoriten-Sammlungen in Europa.

  7. Direct Analysis of Oil Additives by High-Field Asymmetric Waveform Ion Mobility Spectrometry-Mass Spectrometry Combined with Electrospray Ionization and Desorption Electrospray Ionization.

    PubMed

    Da Costa, Caitlyn; Turner, Matthew; Reynolds, James C; Whitmarsh, Samuel; Lynch, Tom; Creaser, Colin S

    2016-02-16

    The analysis of corrosion inhibitors in the presence and absence of an oil matrix is reported using electrospray ionization (ESI) and desorption electrospray ionization (DESI), hyphenated with miniaturized high-field asymmetric waveform ion mobility spectrometry (FAIMS) and mass spectrometry (MS). The target analytes were successfully ionized in solution by ESI and directly from steel surfaces using DESI ambient ionization at levels ≥0.0004% w/w (4 ppm) in oil. Differences in the mass spectral profiles observed for the additive/oil mixture are attributed to differences between the ESI and DESI ionization processes. The use of FAIMS improved selectivity for ESI generated analyte ions through reduction in the chemical noise resulting from the oil matrix. DESI enabled the direct, rapid, native state interrogation of oil samples on steel surfaces without sample pretreatment, and the hyphenation of DESI with the miniaturized FAIMS enhanced the relative analyte responses of the surface-active corrosion inhibitors.

  8. Lateral resolution of desorption nanoelectrospray: a nanospray tip without nebulizing gas as a source of primary charged droplets.

    PubMed

    Hartmanová, L; Lorencová, I; Volný, M; Fryčák, P; Havlíček, V; Chmelíčková, H; Ingr, T; Lemr, K

    2016-04-07

    Desorption nanoelectrospray (nanoDESI) was described in 2007 and it represents a miniaturized version of desorption electrospray without the assistance of the nebulizing gas. Compared to DESI, a nanoelectrospray tip (2 ± 1 μm I.D.) generates primary charged droplets of smaller sizes and lower spray liquid flow rates. This is the first report on utilization of nanoDESI for mass spectrometry imaging (MSI). Its new coupling with a Q-TOF instrument allowed faster mass spectra acquisition (4 Hz) essential for MSI of fine surface details. To evaluate nanoDESI potential for mass spectrometry imaging, etched glass substrates with Rhodamine B patterns of different dimensions were prepared. The Rhodamine B lines were analysed in 1D scanning mode and their width was determined experimentally by nanoDESI measurement. The experimental data revealed that the lateral resolution of nanoDESI is close to 30 μm along the x-axis (orthogonal to the inlet). 2D scanning mode confirmed good resolution along both axes as dye squares with dimensions about 60 μm × 60 μm were easily distinguished. The low flow rate of the spray liquid reduced undesirable analyte washing effects, which allowed repeated scanning analysis of the surface. The presented results demonstrate the applicability of nanoDESI for high surface resolution mass spectrometry imaging.

  9. Measuring Protein-Ligand Interactions Using Liquid Sample Desorption Electrospray Ionization Mass Spectrometry

    PubMed Central

    Liu, Pengyuan; Zhang, Jiang; Ferguson, Carly N.; Chen, Hao; Loo, Joseph A.

    2014-01-01

    We have shown previously that liquid sample desorption electrospray ionization-mass spectrometry (DESI-MS) is able to measure large proteins and noncovalently-bound protein complexes (to 150 kDa) (Ferguson et al., Anal. Chem. 2011, 83, 6468-6473). In this study, we further investigate the application of liquid sample DESI-MS to probe protein-ligand interactions. Liquid sample DESI allows the direct formation of intact protein-ligand complex ions by spraying ligands toward separate protein sample solutions. This type of “reactive” DESI methodology can provide rapid information on binding stiochiometry, selectivity, and kinetics, as demonstrated by the binding of ribonuclease A (RNaseA, 13.7 kDa) with cytidine nucleotide ligands and the binding of lysozyme (14.3 kDa) with acetyl chitose ligands. A higher throughput method for ligand screening by liquid sample DESI was demonstrated, in which different ligands were sequentially injected as a segmented flow for DESI ionization. Furthermore, supercharging to enhance analyte charge can be integrated with liquid sample DESI-MS without interfering with the formation of protein-ligand complexes. PMID:24237005

  10. Status of the CCD development for the Dark Energy Spectroscopic Instrument

    NASA Astrophysics Data System (ADS)

    Bebek, C. J.; Emes, J. H.; Groom, D. E.; Haque, S.; Holland, S. E.; Jelinsky, P. N.; Karcher, A.; Kolbe, W. F.; Lee, J. S.; Palaio, N. P.; Schlegel, D. J.; Wang, G.; Groulx, R.; Frost, R.; Estrada, J.; Bonati, M.

    2017-04-01

    We describe improvements in CCD performance that have been achieved on 4k×4k, (15 μm)2-pixel, fully depleted CCDs for the Dark Energy Spectroscopic Instrument (DESI) [1]. With respect to our previous work on CCDs for the Dark Energy Camera and the Baryon Oscillation Spectroscopic Survey, our goals for the DESI CCD development were to improve read noise and quantum efficiency, improve the astrometric precision, and decrease pixel-size variations. We report experimental results on recently fabricated CCDs to be used in DESI.

  11. Improved Imaging Resolution in Desorption Electrospray Ionization Mass Spectrometry

    SciTech Connect

    Kertesz, Vilmos; Van Berkel, Gary J

    2008-01-01

    Imaging resolution of desorption electrospray ionization mass spectrometry (DESI-MS) was investigated using printed patterns on paper and thin-layer chromatography (TLC) plate surfaces. Resolution approaching 40 m was achieved with a typical DESI-MS setup, which is approximately 5 times better than the best resolution reported previously. This improvement was accomplished with careful control of operational parameters (particularly spray tip-to-surface distance, solvent flow rate, and spacing of lane scans). Also, an appropriately strong analyte/surface interaction and uniform surface texture on the size scale no larger that the desired imaging resolution were required to achieve this resolution. Overall, conditions providing the smallest possible effective desorption/ionization area in the DESI impact plume region and minimizing the analyte redistribution on the surface during analysis led to the improved DESI-MS imaging resolution.

  12. High Energy Physics: Report of research accomplishments and future goals, FY 1983

    SciTech Connect

    Barish, B C

    1983-12-31

    Continuing research in high energy physics carried out by the group from the California Institute of Technology. The program includes research in theory, phenomenology, and experimental high energy physics. The experimental program includes experiments at SLAC, FERMILAB, and DESY.

  13. Shotgun Approach for Quantitative Imaging of Phospholipids Using Nanospray Desorption Electrospray Ionization Mass Spectrometry

    SciTech Connect

    Lanekoff, Ingela T.; Thomas, Mathew; Laskin, Julia

    2014-02-04

    Mass spectrometry imaging (MSI) has been extensively used for determining spatial distributions of molecules in biological samples, and there is increasing interest in using MSI for quantification. Nanospray desorption electrospray ionization, or nano-DESI, is an ambient MSI technique where a solvent is used for localized extraction of molecules followed by nanoelectrospray ionization. Doping the nano-DESI solvent with carefully selected standards enables online quantification during MSI experiments. In this proof-of-principle study, we demonstrate this quantification approach can be extended to provide shotgun-like quantification of phospholipids in thin brain tissue sections. Specifically, two phosphatidylcholine (PC) standards were added to the nano-DESI solvent for simultaneous imaging and quantification of 22 PC species observed in nano-DESI MSI. Furthermore, by combining the quantitative data obtained in the individual pixels, we demonstrate quantification of these PC species in seven different regions of a rat brain tissue section.

  14. JWST Primary Mirror Installation Complete

    NASA Image and Video Library

    Completing the assembly of the primary mirror, which took place at NASA’s Goddard Space Flight Center in Greenbelt, Maryland, is a significant milestone and the culmination of over a decade of desi...

  15. Determination of T-2 and HT-2 toxins from maize by direct analysis in real time - mass spectrometry (DART-MS)

    USDA-ARS?s Scientific Manuscript database

    Ambient desorption ionization techniques, such as laser desorption with electrospray ionization assistance (ELDI), direct analysis in real time (DART) and desorption electrospray ionization (DESI) have been developed as alternatives to traditional mass spectrometric-based methods. Such techniques al...

  16. Tissue Imaging Using Nanospray Desorption Electrospray Ionization Mass Spectrometry

    SciTech Connect

    Laskin, Julia; Heath, Brandi S.; Roach, Patrick J.; Cazares, Lisa H.; Semmes, O. John

    2012-01-03

    We present the first results showing the ambient imaging of biological samples in their native environment using nanospray desorption ionization (nanoDESI) mass spectrometry. NanoDESI is an ambient pressure ionization technique that enables precise control of ionization of molecules from substrates. We demonstrate highly sensitive and robust analysis of tissue samples with high spatial resolution (<12 {mu}m) without sample preparation, which will be essential for applications in clinical diagnostics, drug discovery, molecular biology, and biochemistry.

  17. Remote mass spectrometric sampling of electrospray- and desorption electrospray-generated ions using an air ejector.

    PubMed

    Dixon, R Brent; Bereman, Michael S; Muddiman, David C; Hawkridge, Adam M

    2007-10-01

    A commercial air ejector was coupled to an electrospray ionization linear ion trap mass spectrometer (LTQ) to transport remotely generated ions from both electrospray (ESI) and desorption electrospray ionization (DESI) sources. We demonstrate the remote analysis of a series of analyte ions that range from small molecules and polymers to polypeptides using the AE-LTQ interface. The details of the ESI-AE-LTQ and DESI-AE-LTQ experimental configurations are described and preliminary mass spectrometric data are presented.

  18. Astronomen bei der Arbeit - Live-Konferenz mit La Palma

    NASA Astrophysics Data System (ADS)

    Beck, Paul G.

    2012-02-01

    "Wie kann man sich die nächtliche Arbeit eines Astronomen am Teleskop vorstellen?" Diese Frage stellen sich viele wissenschaftlich interessierte Menschen, die noch kein professionelles Observatorium besuchen konnten. Das multimediale Experiment "Call a Scientist" verband Besucher einer österreichischen Amateursternwarte live mit dem Großobservatorium in La Palma und brachte damit einer interessierten Öffentlichkeit seltene Einblicke in die Arbeitsweise der modernen Astronomie nahe.

  19. Untersuchung von Methoden zur ldentifikation der zeit und frequenzabhangigen Netzimpedanz (Investigation of Methods for the Identification of Time and Frequency dependent Network Impedances) Impedances

    DTIC Science & Technology

    2016-10-01

    Wissenschaftlicher Tatigkeitsnachweis 169 vii Nomenklatur Verwendete Abki.irzungen AAF AC ADC CAD DC DFT DNL DPLL DSP DUT EE EEA EEG EMV...Gesetz ( EEG ) von 2000 [BGBIOO] und dessen Novellierungen [BGB104),[BGB108],[BGB111],[BGB112] [BGB114] ein rasanter Ausbau der EE bei der...Elektroenergieversorgung eingeleitet. Das EEG garantiert eine bevorzugte Netzeinspeisung mit festen Vergiitungssiitzen fur die Stromerzeugung aus erneuerbaren

  20. [Critical mass, explosive participation at the Max-Planck Institute about research of the living conditions of the scientific-technical world in Starnberg].

    PubMed

    Sonntag, Philipp

    2014-01-01

    Reviewers of the Max-Planck-Institut zur Erforschung der Lebensbedingungen der wissenschaftlich-technischen Welt (MPIL) did focus upon an abundance of vague reports of evaluative commissions, of benchmarking, of scientific modes. Thus it remained rather neglected, what staff actually had researched. An example: Progression and end of project AKR (Work-Consumption-Assessment) does display all kinds of related emotions at MPIL, and the sensitive guidance by Carl Friedrich von Weizsäcker.

  1. Zwergsatelliten und Sternriesen

    NASA Astrophysics Data System (ADS)

    Baade, Dietrich; Kuschnig, Rainer

    2017-03-01

    Leuchtkräftige Sterne sind schwierig: Fär Fotometrie mit großen Teleskopen sind sie zu hell, und ihre geringe Zahl macht konventionelle Lösungen unwirtschaftlich, besonders im Weltraum, wo die äußerste Präzision gegeben wäre. Mit einer Mini-Armada von Nanosatelliten haben Ingenieure und Astronomen aus Kanada, Österreich und Polen nun die Lösung gefunden - auch schon für viele wissenschaftliche Fragen.

  2. Study of Electrochemical Reactions Using Nanospray Desorption Electrospray Ionization Mass Spectrometry

    SciTech Connect

    Liu, Pengyuan; Lanekoff, Ingela T.; Laskin, Julia; Dewald, Howard D.; Chen, Hao

    2012-07-03

    The combination of electrochemistry (EC) and mass spectrometry (MS) is a powerful analytical tool for studying mechanisms of redox reactions, identification of products and intermediates, and online derivatization/recognition of analytes. This work reports a new coupling interface for EC/MS by employing nanospray desorption electrospray ionization (nano-DESI), a recently developed ambient ionization method. We demonstrate online coupling of nano-DESI-MS with a traditional electrochemical flow cell, in which the electrolyzed solution emanating from the cell is ionized by nano-DESI for MS analysis. Furthermore, we show first coupling of nano-DESI-MS with an interdigitated array (IDA) electrode enabling chemical analysis of electrolyzed samples directly from electrode surfaces. Because of its inherent sensitivity, nano-DESI enables chemical analysis of small volumes and concentrations of sample solution. Specifically, good-quality signal of dopamine and its oxidized form, dopamine ortho-quinone, was obtained using 10 μL of 1 μM solution of dopamine on the IDA. Oxidation of dopamine, reduction of benzodiazepines, and electrochemical derivatization of thiol groups were used to demonstrate the performance of the technique. Our results show the potential of nano-DESI as a novel interface for electrochemical mass spectrometry research.

  3. Analysis of transcription profile to reveal altered signaling pathways following the overexpression of human desumoylating isopeptidase 2 in pancreatic cancer cells

    PubMed Central

    Fu, Yu-Yin; Kang, Yu-Huan; Shen, Cong-Cong; Wang, Rui-Xue; Yu, Lin; Li, Xin-Yue; Cui, Dan-Dan; Yang, Jin-Liang; Yao, Yu-Qin; Gou, Lan-Tu

    2016-01-01

    Human desumoylating isopeptidase 2 (DESI-2) is a member of the DESI family and contains a conserved PPPDE1 domain. Previous studies have demonstrated that DESI-2 overexpression may induce cell apoptosis. In the present study, differentially expressed genes were analyzed using a transcription microarray in DESI-2 overexpressing PANC-1 pancreatic cancer cells. A total of 45,033 genes were examined by microarray, which identified 1,766 upregulated and 1,643 downregulated genes. A series of altered signaling pathways were analyzed, in which certain essential signaling factors, including retinoid X receptor (RXR), BH3 interacting-domain death agonist, Ras homolog gene family member A (RhoA) and Rho-associated protein kinase, were further investigated at the protein level. The release of cytochrome c and the activation of caspase-3 were also detected by western blot analysis. Immunohistochemistry further revealed the expression features of RXR and RhoA in pancreatic ductal adenocarcinoma tissues with various DESI-2 expression levels. The results serve as a valuable reference for the further elucidation of the functions of DESI-2 in pancreatic cancer. PMID:28105175

  4. Fast analysis of high-energy compounds and agricultural chemicals in water with desorption electrospray ionization mass spectrometry.

    PubMed

    Mulligan, Christopher C; MacMillan, Denise K; Noll, Robert J; Cooks, R Graham

    2007-01-01

    Novel sampling and detection methods using desorption electrospray ionization (DESI) are examined in the detection of explosives (RDX, TNT, HMX, and TNB) and agricultural chemicals (atrazine, alachlor and acetochlor) from aqueous matrices and authentic contaminated groundwater samples. DESI allows analysis of solid and liquid compounds directly from surfaces of interest with little or no sample preparation. Significant savings in analysis time and sample preparation are realized. The methods investigated here include (i) immediate analysis of filter paper wetted with contaminated water samples without further sample preparation, (ii) rapid liquid-liquid extraction (LLE), and (iii) analyte extraction from contaminated groundwater samples on-site using solid-phase extraction (SPE) membranes, followed by direct DESI analysis of the membrane. The wetted filter paper experiment demonstrates the maximum sample throughput for DESI analysis of aqueous matrices but has inadequate sensitivity for some of these analytes. Both the LLE and the SPE methods have adequate sensitivity. The resulting SPE membranes and/or small volume solvent extracts produced in these experiments are readily transported to off-site facilities for direct analysis by DESI. This realizes a significant reduction in the costs of sample shipping compared with those for typical liter-sized samples of groundwater. Total analysis times for these preliminary DESI analyses are comparable with or shorter than those for GC/MS and limits of detection approach environmental action levels for these compounds while maintaining a modest relative standard deviation. Tandem mass spectrometric data is used to provide additional specificity as needed.

  5. High-throughput detection of drugs binding to proteins using desorption electrospray ionization mass spectrometry.

    PubMed

    Yao, Chenxi; Na, Na; Huang, Lingyun; He, Dacheng; Ouyang, Jin

    2013-09-10

    In this paper, we present a strategy for screening drugs that bind to proteins by combining centrifugal filtration with desorption electrospray ionization mass spectrometry (DESI-MS). Membrane filtration was used to remove any unbound drugs. Then, drug-protein complexes deposited on the DESI substrate were dissociated during the DESI-MS analytical process, and the liberated drugs were measured. To validate the methodology, the screening of a series of drugs against two types of proteins was performed. Three DNA topoisomerase I (Topo I) inhibitors (camptothecin (CPT), hydroxycamptothecin (OHCPT) and 7-ethyl-10-hydroxycamptothecin (SN-38)) were screened against Topo I and the DNA-Topo I complex using DESI-MS. The results indicated that none of the inhibitors bound to Topo I, because the inhibitors had binding affinities only to the DNA-Topo I complex. Among the three drugs that bound to the DNA-Topo I complex, SN-38 had the strongest relative binding affinity, and CPT had the weakest relative binding affinity. The impact of the DESI spray solvent composition on the analysis of drug-protein complex binding was evaluated. Seven alkaloid drugs were also screened against Topo I using DESI-MS. Berberine and palmatine had good binding affinities. A screening of 21 types of drugs was carried out to determine whether the drugs bound to human serum albumin (HSA). The DESI-MS screening process could be achieved within 1.75min. The study provides a method to qualitatively detect compounds that bind to proteins, showing great potential in drug design and screening. Copyright © 2013 Elsevier B.V. All rights reserved.

  6. Chemical Characterization of Crude Petroleum Using Nanospray Desorption Electrospray Ionization Coupled with High-Resolution Mass Spectrometry

    SciTech Connect

    Eckert, Peter A.; Roach, Patrick J.; Laskin, Alexander; Laskin, Julia

    2012-02-07

    Nanospray desorption electrospray ionization (nano-DESI) combined with high-resolution mass spectrometry was used for the first time for the analysis of liquid petroleum crude oil samples. The analysis was performed in both positive and negative ionization modes using three solvents one of which (acetonitrile/toluene mixture) is commonly used in petroleomics studies while two other polar solvents (acetonitrile/water and methanol/water mixtures) are generally not compatible with petroleum characterization using mass spectrometry. The results demonstrate that nano-DESI analysis efficiently ionizes petroleum constituents soluble in a particular solvent. When acetonitrile/toluene is used as a solvent, nano-DESI generates electrospray-like spectra. In contrast, strikingly different spectra were obtained using acetonitrile/water and methanol/water. Comparison with the literature data indicates that these solvents selectively extract water-soluble constituents of the crude oil. Water-soluble compounds are predominantly observed as sodium adducts in nano-DESI spectra indicating that addition of sodium to the solvent may be a viable approach for efficient ionization of water-soluble crude oil constituents. Nano-DESI enables rapid screening of different classes of compounds in crude oil samples using solvents that are rarely used for petroleum characterization.

  7. Analysis of nitrogen-based explosives with desorption atmospheric pressure photoionization mass spectrometry.

    PubMed

    Kauppila, T J; Flink, A; Pukkila, J; Ketola, R A

    2016-02-28

    Fast methods that allow the in situ analysis of explosives from a variety of surfaces are needed in crime scene investigations and home-land security. Here, the feasibility of the ambient mass spectrometry technique desorption atmospheric pressure photoionization (DAPPI) in the analysis of the most common nitrogen-based explosives is studied. DAPPI and desorption electrospray ionization (DESI) were compared in the direct analysis of trinitrotoluene (TNT), trinitrophenol (picric acid), octogen (HMX), cyclonite (RDX), pentaerythritol tetranitrate (PETN), and nitroglycerin (NG). The effect of different additives in DAPPI dopant and in DESI spray solvent on the ionization efficiency was tested, as well as the suitability of DAPPI to detect explosives from a variety of surfaces. The analytes showed ions only in negative ion mode. With negative DAPPI, TNT and picric acid formed deprotonated molecules with all dopant systems, while RDX, HMX, PETN and NG were ionized by adduct formation. The formation of adducts was enhanced by addition of chloroform, formic acid, acetic acid or nitric acid to the DAPPI dopant. DAPPI was more sensitive than DESI for TNT, while DESI was more sensitive for HMX and picric acid. DAPPI could become an important method for the direct analysis of nitroaromatics from a variety of surfaces. For compounds that are thermally labile, or that have very low vapor pressure, however, DESI is better suited. Copyright © 2016 John Wiley & Sons, Ltd.

  8. Feasibility of desorption atmospheric pressure photoionization and desorption electrospray ionization mass spectrometry to monitor urinary steroid metabolites during pregnancy.

    PubMed

    Vaikkinen, Anu; Rejšek, Jan; Vrkoslav, Vladimír; Kauppila, Tiina J; Cvačka, Josef; Kostiainen, Risto

    2015-06-23

    Steroids have important roles in the progress of pregnancy, and their study in maternal urine is a non-invasive method to monitor the steroid metabolome and its possible abnormalities. However, the current screening techniques of choice, namely immunoassays and gas and liquid chromatography-mass spectrometry, do not offer means for the rapid and non-targeted multi-analyte studies of large sample sets. In this study, we explore the feasibility of two ambient mass spectrometry methods in steroid fingerprinting. Urine samples from pregnant women were screened by desorption electrospray ionization (DESI) and desorption atmospheric pressure photoionization (DAPPI) Orbitrap high resolution mass spectrometry (HRMS). The urine samples were processed by solid phase extraction for the DESI measurements and by enzymatic hydrolysis and liquid-liquid-extraction for DAPPI. Consequently, steroid glucuronides and sulfates were detected by negative ion mode DESI-HRMS, and free steroids by positive ion mode DAPPI-HRMS. In DESI, signals of eleven steroid metabolite ions were found to increase as the pregnancy proceeded, and in DAPPI ten steroid ions showed at least an order of magnitude increase during pregnancy. In DESI, the increase was seen for ions corresponding to C18 and C21 steroid glucuronides, while DAPPI detected increased excretion of C19 and C21 steroids. Thus both techniques show promise for the steroid marker screening in pregnancy. Copyright © 2015 Elsevier B.V. All rights reserved.

  9. Ammonium Bicarbonate Addition Improves the Detection of Proteins by Desorption Electrospray Ionization Mass Spectrometry

    NASA Astrophysics Data System (ADS)

    Honarvar, Elahe; Venter, Andre R.

    2017-03-01

    The analysis of protein by desorption electrospray ionization mass spectrometry (DESI-MS) is considered impractical due to a mass-dependent loss in sensitivity with increase in protein molecular weights. With the addition of ammonium bicarbonate to the DESI-MS analysis the sensitivity towards proteins by DESI was improved. The signal to noise ratio (S/N) improvement for a variety of proteins increased between 2- to 3-fold relative to solvent systems containing formic acid and more than seven times relative to aqueous methanol spray solvents. Three methods for ammonium bicarbonate addition during DESI-MS were investigated. The additive delivered improvements in S/N whether it was mixed with the analyte prior to sample deposition, applied over pre-prepared samples, or simply added to the desorption spray solvent. The improvement correlated well with protein pI but not with protein size. Other ammonium or bicarbonate salts did not produce similar improvements in S/N, nor was this improvement in S/N observed for ESI of the same samples. As was previously described for ESI, DESI also caused extensive protein unfolding upon the addition of ammonium bicarbonate.

  10. Ammonium Bicarbonate Addition Improves the Detection of Proteins by Desorption Electrospray Ionization Mass Spectrometry

    NASA Astrophysics Data System (ADS)

    Honarvar, Elahe; Venter, Andre R.

    2017-06-01

    The analysis of protein by desorption electrospray ionization mass spectrometry (DESI-MS) is considered impractical due to a mass-dependent loss in sensitivity with increase in protein molecular weights. With the addition of ammonium bicarbonate to the DESI-MS analysis the sensitivity towards proteins by DESI was improved. The signal to noise ratio (S/N) improvement for a variety of proteins increased between 2- to 3-fold relative to solvent systems containing formic acid and more than seven times relative to aqueous methanol spray solvents. Three methods for ammonium bicarbonate addition during DESI-MS were investigated. The additive delivered improvements in S/N whether it was mixed with the analyte prior to sample deposition, applied over pre-prepared samples, or simply added to the desorption spray solvent. The improvement correlated well with protein pI but not with protein size. Other ammonium or bicarbonate salts did not produce similar improvements in S/N, nor was this improvement in S/N observed for ESI of the same samples. As was previously described for ESI, DESI also caused extensive protein unfolding upon the addition of ammonium bicarbonate. [Figure not available: see fulltext.

  11. Online coupling of electrochemical reactions with liquid sample desorption electrospray ionization-mass spectrometry.

    PubMed

    Li, Jiwen; Dewald, Howard D; Chen, Hao

    2009-12-01

    The combination of electrochemistry (EC) and mass spectrometry (MS) is a powerful analytical tool to study redox reactions. This work reports the online coupling of a thin-layer electrochemical flow cell with liquid sample desorption electrospray ionization mass spectrometry (DESI-MS) and its applications in investigating various electrochemical reactions of biological molecules such as oxidative formation and reductive cleavage of disulfide bonds and online derivatization of peptides/proteins. As a result of the direct sampling nature of DESI, several useful features of such a coupling have been found, including simple instrumentation, fast response time (e.g., 3.6 s in the case of dopamine oxidation), freedom to choose a favorable ionization mode of DESI or traditional electrolysis solvent systems, and the absence of background signal possibly resulting from ionization when the cell is off (e.g., in the case of dopamine oxidation). More importantly, with the use of this new coupling apparatus, three disulfide bonds of insulin were fully cleaved by electrolytic reduction and both the A and B chains of the protein were successfully detected online by DESI-MS. In addition, online tagging of free cysteine residues of peptides/proteins employing electrogenerated dopamine o-quinone can be performed. These revealed characteristics of the coupling along with examined electrochemical reactions suggest that EC/DESI-MS has good potential in bioanalysis.

  12. Non-proximate detection of small and large molecules by desorption electrospray ionization and desorption atmospheric pressure chemical ionization mass spectrometry: instrumentation and applications in forensics, chemistry, and biology.

    PubMed

    Cotte-Rodríguez, Ismael; Mulligan, Christopher C; Cooks, R Graham

    2007-09-15

    Ambient surfaces are examined by mass spectrometry at distances of up to 3 m from the instrument without any prior sample preparation. Non-proximate versions of the desorption electrospray ionization (DESI) and desorption atmospheric pressure chemical ionization experiments are shown to allow rapid, sensitive, and selective detection of trace amounts of active ingredients in pharmaceutical drug formulations, illicit drugs (methamphetamine, cocaine, and diacetylmorphine), organic salts, peptides, chemical warfare agent simulants, and other small organic compounds. Utilizing an ion transport tube to transport analyte ions to the mass spectrometer, nonproximate DESI allows one to collect high-quality, largely interference-free spectra with signal-to-noise (S/N) ratios of more than 100. High selectivity is achieved by tandem mass spectrometry and by reactive DESI, a variant experiment in which reagents added into the solvent spray allow bond-forming reactions with the analyte. Ion/molecule reactions were found to selectively suppress the response of mixture components other than the analyte of interest in nonproximate-DESI. Flexible ion transport tubing is also investigated, allowing performance similar to stainless steel tubing in the transport of ions from the sample to the mass spectrometer. Transfer tube temperature effects are examined. A multiple sprayer DESI source capable of analyzing a larger sample area was evaluated to decrease the sampling time and increase sample throughput. Low nanogram detection limits were obtained for the compounds studied from a wide variety of surfaces, even those present in complex matrixes.

  13. Age-Dependent Variation in Hormonal Concentration and Biochemical Constituents in Blood Plasma of Indian Native Fowl

    PubMed Central

    Biswas, Avishek; Mohan, Jag; Sastry, Kochigant Venkata Hanumant

    2010-01-01

    This experiment was to investigate the age-related changes in hormonal concentration and biochemical constituents of blood plasma in Indian native desi fowl. One hundred and sixty two (54 from each breed, i.e., Kadaknath (KN), Aseel peela (AP), and White leghorn (WLH)) day-old female chicks were randomly divided into nine groups each of 18 chicks (3 groups × 3 replicates). WLH was taken in this study to compare the characteristics of Indian native desi fowl. The highest level of estrogen hormone in WLH and desi fowl in blood plasma was occurred at 18 and 24 wks of age, respectively. Whereas, the peak of progesterone hormone in WLH hens noticed around 24 wks, in case of desi fowls, it was at 30 wks of age. Irrespective of the breed, the hormonal profile of Triiodothyronine (T3) and Thyroxine (T4) in blood plasma was found highest around 6 to 12 wks of age. Activities of acid phosphatase (ACP) increased with the reduction of alkaline phosphate (ALP) activities at different time intervals. Irrespective of the breed, transaminases (glutamic oxaloacetic transaminase (GOT) and glutamic pyruvic transaminase (GPT)) activities of blood plasma increased linearly with the advancement of the age. From this study, it may be concluded that sexual maturity of the Indian native desi fowl occurred nearly 6 wk later (24 wk) than WLH. PMID:21234314

  14. Micro-solid-phase extraction coupled to desorption electrospray ionization-high-resolution mass spectrometry for the analysis of explosives in soil.

    PubMed

    Bianchi, Federica; Gregori, Adolfo; Braun, Gabriele; Crescenzi, Carlo; Careri, Maria

    2015-01-01

    Home-made micro-solid-phase extraction (SPE) cartridges using different adsorbent materials were tested for the desorption electrospray ionization-high-resolution mass spectrometry (DESI-HRMS) determination of explosives like 2,4,6-trinitrotoluene, cyclotrimethylene-trinitramine, cyclotetramethylene-tetranitramine, pentaerythritol tetranitrate, and trinitrophenylmethylnitramine in soil samples. Quantitation limits in the low nanogram per kilogram range proved the reliability of the method for the detection of explosives at ultra-trace levels. The reduced sample preparation allowed for low costs and high-throughput analyses. Finally, the superior extraction capability of the method was proved by obtaining DESI-HRMS responses at least five times higher than those achieved by performing DESI-HRMS analyses of solid-liquid extracts spotted onto commercial polytetrafluoroethylene slides.

  15. Computing at h1 - Experience and Future

    NASA Astrophysics Data System (ADS)

    Eckerlin, G.; Gerhards, R.; Kleinwort, C.; KrÜNer-Marquis, U.; Egli, S.; Niebergall, F.

    The H1 experiment has now been successfully operating at the electron proton collider HERA at DESY for three years. During this time the computing environment has gradually shifted from a mainframe oriented environment to the distributed server/client Unix world. This transition is now almost complete. Computing needs are largely determined by the present amount of 1.5 TB of reconstructed data per year (1994), corresponding to 1.2 × 107 accepted events. All data are centrally available at DESY. In addition to data analysis, which is done in all collaborating institutes, most of the centrally organized Monte Carlo production is performed outside of DESY. New software tools to cope with offline computing needs include CENTIPEDE, a tool for the use of distributed batch and interactive resources for Monte Carlo production, and H1 UNIX, a software package for automatic updates of H1 software on all UNIX platforms.

  16. Fifty not out

    NASA Astrophysics Data System (ADS)

    2009-12-01

    What have the DESY laboratory in Germany, Richard Feynman's visionary lecture on nanotechnology, the discovery of the Aharonov-Bohm effect and the "two cultures" debate got in common? The answer is that they are all half a century old this year. The DESY lab was officially launched on 18 December 1959 and is marking its 50th anniversary with a series of events that included the official opening of the PETRA III synchrotron last month. Initially a particle-physics lab pure and simple, DESY is now changing its focus to accelerator science and is set to open its massive new 1bn European X-ray Free Electron Laser in 2014 (p12).

  17. Differences between easy- and difficult-to-mill chickpea (Cicer arietinum L.) genotypes. Part I: broad chemical composition.

    PubMed

    Wood, Jennifer A; Knights, Edmund J; Campbell, Grant M; Choct, Mingan

    2014-05-01

    Ease of milling is an important quality trait for chickpeas (Cicer arietinum L.) and involves two separate processes: removal of the seed coat and splitting of cotyledons. Four chickpea genotypes (two desi types, one kabuli type and one interspecific hybrid with 'wild' C. echinospermum parentage) of differing ease of milling were examined to identify associated seed composition differences in the seed coat, cotyledons and their junctions (abaxial and adaxial). Several components in different fractions were associated with ease of milling chickpea seeds: primarily soluble and insoluble non-starch polysaccharides (including pectins) and protein at the seed coat and cotyledon junctions, and the lignin content of the seed coat. This study shows that the chemical composition of chickpea does vary with seed type (desi and kabuli) and within desi genotypes in ways that are consistent with physical explanations of how seed structure and properties relate to milling behaviour. © 2013 Society of Chemical Industry.

  18. Studies on gastrointestinal parasites of pigs in Shimoga region of Karnataka.

    PubMed

    Krishna Murthy, C M; Ananda, K J; Adeppa, J; Satheesha, M G

    2016-09-01

    The study was conducted to ascertain the actual status of gastro-intestinal parasites in pigs maintained under different rearing systems in Shimoga region, Karnataka state. A total of 150 Pigs fecal samples were examined, which includes 50 from organized piggery farm, Veterinary College Shimoga, 50 from private piggery farm of Shimoga and 50 from free range desi pigs of Shimoga city. The fecal samples were processed and examined by direct and sedimentation method. Out of 50 fecal samples examined from organized piggery farm, 19 were found positive for different parasitic eggs, Out of 50 fecal samples screened form private farm, 28 harbored different parasites, whereas from 50 free range desi pigs fecal samples examined, all showed one and other parasitic eggs/ova. The percent prevalence of parasitic infection is more in free range desi pigs compared to Yorkshire breeds maintained under stall fed condition.

  19. Surface-enhanced transmission mode desorption electrospray ionization: increasing the specificity of ambient ionization mass spectrometric analyses.

    PubMed

    Chipuk, Joseph E; Gelb, Michael H; Brodbelt, Jennifer S

    2010-01-01

    Fabrication and utilization of mesh materials specifically designed to capture analytes from solution facilitates the direct coupling of affinity capture and ambient ionization mass spectrometry via surface-enhanced transmission mode desorption electrospray ionization (TM-DESI). Incorporation of photolabile groups within the linkage between the mesh surface and the covalently modified reactive probe affords facile release of mass tagged analytes directly to mesh surfaces that have been rinsed free of matrix interferences. The approach introduces increased specificity to the already rapid TM-DESI analysis technique, resulting in a powerful tool for high-throughput screening of targeted analytes. Specific capture of thiols is discussed herein, but the surface-enhanced TM-DESI technique can be readily extended to other functional groups by alteration of the capture agent.

  20. Multistage Reactive Transmission-Mode Desorption Electrospray Ionization Mass Spectrometry

    NASA Astrophysics Data System (ADS)

    Peters, Kevin C.; Comi, Troy J.; Perry, Richard H.

    2015-09-01

    Elucidating reaction mechanisms is important for advancing many areas of science such as catalyst development. It is often difficult to probe fast reactions at ambient conditions with high temporal resolution. In addition, systems involving reagents that cross-react require analytical methods that can minimize interaction time and specify their order of introduction into the reacting system. Here, we explore the utility of transmission mode desorption electrospray ionization (TM-DESI) for reaction monitoring by directing a microdroplet spray towards a series of meshes with micrometer-sized openings coated with reagents, an approach we call multistage reactive TM-DESI (TM n -DESI, where n refers to the number of meshes; n = 2 in this report). Various stages of the reaction are initiated at each mesh surface, generating intermediates and products in microdroplet reaction vessels traveling towards the mass spectrometer. Using this method, we investigated the reactivity of iron porphyrin catalytic hydroxylation of propranolol and other substrates. Our experimental results indicate that TM n -DESI provides the ability to spatially separate reagents and control their order of introduction into the reacting system, thereby minimizing unwanted reactions that lead to catalyst deactivation and degradation products. In addition, comparison with DESI-MS analyses (the Zare and Latour laboratories published results suggesting accessible reaction times <1 ms) of the reduction of dichlorophenolindophenol by L-ascorbic acid suggest that TM 1 -DESI can access reaction times less than 1 ms. Multiple meshes allow sequential stages of desorption/ionization per MS scan, increasing the number of analytes and reactions that can be characterized in a single experiment.

  1. Clinicians’ concerns about decision support interventions for patients facing breast cancer surgery options: understanding the challenge of implementing shared decision‐making

    PubMed Central

    Caldon, Lisa J.M.; Collins, Karen A.; Reed, Malcolm W.; Sivell, Stephanie; Austoker, Joan; Clements, Alison M.; Patnick, Julietta; Elwyn, Glyn

    2011-01-01

    Abstract Background  There is interest in interventions that provide support for patients facing challenging decisions, such as the choice between mastectomy and breast conservation surgery for breast cancer. However, it is difficult to implement these interventions. One potential source of resistance is the attitudes of clinicians. Objective  To examine specialist breast clinicians’ opinions about the provision of decision support interventions (DesIs) for patients. Methods  As part of the development of a web‐based DesI (BresDex), semi‐structured interviews were conducted with specialist clinicians [breast surgeons, breast care nurses (BCNs) and oncologists] from four breast units in a UK region, and speciality national opinion leaders. Interviews were recorded, transcribed and analysed using the Framework approach. Results  A majority of the 24 clinicians interviewed did not have a working knowledge of DesIs and were ambivalent or sceptical. Many expressed conflicting opinions: they noted the potential benefits, but at the same time expressed reservations about information overlap, overload and about content that they considered inappropriate. Many wanted access to DesIs to be always under clinical supervision. In particular, they were uncertain as regards how DeSIs could be tailored to individual patients’ needs and also accommodate clinical practice variation. BCNs were particularly concerned that DesIs might induce patient anxiety and replace their role. Conclusions  The concept of providing interventions to support patients in decision‐making tasks generated concern, defensiveness and scepticism. These attitudes will be a significant barrier. Implementation efforts will need to recognize and address these issues if these interventions are to become embedded in clinical practice. PMID:21029281

  2. Desorption electrospray ionization mass spectrometry for trace analysis of agrochemicals in food.

    PubMed

    García-Reyes, Juan F; Jackson, Ayanna U; Molina-Díaz, Antonio; Cooks, R Graham

    2009-01-15

    Desorption electrospray ionization (DESI) is applied to the rapid, in situ, direct qualitative and quantitative (ultra)trace analysis of agrochemicals in foodstuffs. To evaluate the potential of DESI mass spectrometry (MS) in toxic residue testing in food, 16 representative multiclass agricultural chemicals (pesticides, insecticides, herbicides, and fungicides) were selected (namely, ametryn, amitraz, azoxystrobin, bitertanol, buprofezin, imazalil, imazalil metabolite, isofenphos-methyl, malathion, nitenpyram, prochloraz, spinosad, terbuthylazine, thiabendazole, and thiacloprid). The DESI-MS experiments were performed using 3 microL of solution spotted onto conventional smooth poly(tetrafluoroethylene) (PTFE) surfaces, with examination by MS and tandem mass spectrometry (MS/MS) using an ion trap mass spectrometer. Optimization of the spray solvent led to the use of acetonitrile/water (80:20) (v/v), with 1% formic acid. Most of the compounds tested showed remarkable sensitivity in the positive ion mode, approaching that attainable with conventional direct infusion electrospray mass spectrometry. To evaluate the potential of the proposed approach in real samples, different experiments were performed including the direct DESI-MS/MS analysis of fruit peels and also of fruit/vegetable extracts. The results proved that DESI allows the detection and confirmation of traces of agrochemicals in actual market-purchased samples. In addition, MS/MS confirmation of selected pesticides in spiked vegetable extracts was obtained at absolute levels as low as 1 pg for ametryn. Quantitation of imazalil residues was also undertaken using an isotopically labeled standard. The data obtained were in agreement with those from the liquid chromatography mass spectrometry (LC-MS) reference method, with relative standard deviation (RSD) values consistently below 15%. The results obtained demonstrate the sensitivity of DESI as they meet the stringent European Union pesticide regulation

  3. Comparison of Drug Distribution Images from Thin Tissue Sections Obtained Using Desorption Electrospray Ionization Tandem Mass Spectrometry and Whole-Body Autoradiography

    SciTech Connect

    Kertesz, Vilmos; Van Berkel, Gary J; Vavek, Marissa; Koeplinger, Kenneth A.; Schneider, Bradley B; Covey, Thomas R.

    2008-01-01

    Desorption electrospray ionization tandem mass spectrometry (DESI-MS/MS) and whole-body autoradiography (WBA) were used for chemical imaging of whole-body thin tissue sections of mice intravenously dosed with propranolol (7.5 mg/kg). DESI-MS/MS imaging utilized selected reaction monitoring detection performed on an AB/MDS SCIEX 4000 QTRAP mass spectrometer equipped with a prototype extended length particle discriminator interface. Propranolol images of the tissue sections using DESI-MS/MS were obtained at surface scan rates of 0.1, 0.5, 2 and 7 mm/s. Although signal decreased with increasing scan rate, useful whole-body images for propranolol were obtained from the tissues even at 7 mm/s, which required just 79 min of analysis time. Attempts to detect and image the distribution of the known propranolol metabolites were unsuccessful. Regions of the tissue sections showing the most radioactivity from WBA sections were excised and analyzed by HPLC with radiochemical detection to determine relative levels of propranolol and metabolites present. Comparison of the DESI-MS/MS signal for propranolol and the radioactivity attributed to propranolol from WBA sections indicated nominal agreement between the two techniques for the amount of propranolol in the brain, lung, and liver. Data from the kidney showed an unexplained disparity between the two techniques. The results of this study show the feasibility of using DESI-MS/MS to obtain useful chemical images of a drug in whole-body thin tissue sections following drug administration at a pharmacologically relevant level. Further optimization to improve sensitivity and enable detection of the drug metabolites will be among the requirements necessary to move DESI-MS/MS chemical imaging forward as a practical tool in drug discovery.

  4. Coupling desorption electrospray ionization with solid-phase microextraction for screening and quantitative analysis of drugs in urine.

    PubMed

    Kennedy, Joseph H; Aurand, Craig; Shirey, Robert; Laughlin, Brian C; Wiseman, Justin M

    2010-09-01

    Direct analysis of silica C(18)-coated solid-phase microextraction (SPME) fibers using desorption electrospray ionization mass spectrometry (DESI-MS) for the purpose of analyzing drugs from raw urine is presented. The method combines a simple, inexpensive, and solvent-less sample preparation technique with the specificity and speed of DESI-MS and MS/MS. Extraction of seven drugs from raw urine is performed using specially designed SPME fibers coated uniformly with silica-C(18) stationary phase. Each SPME device is inserted into unprocessed urine under gentle agitation and, then, removed, rinsed, and analyzed directly by DESI-MS (MS/MS). Rapid screening over a wide mass range is afforded by coupling the method with a time of flight (TOF) mass spectrometer while quantitative analysis is performed using selected reaction monitoring (SRM) using a triple quadrupole mass spectrometer. The performance of the SPME DESI-MS/MS method was evaluated by preparing calibration standards and quality control (QC) samples of the seven drug compounds from urine over a range from 20 to 1000 ng/mL, with the exception of meprobamate which was prepared from 200 to 10000 ng/mL. The calibration curves constructed for each analyte had an R(2) > 0.99. The range of precision (%CV) and accuracy values (% bias) for low QC samples was 1-11% and 3-38%, respectively. Precision and accuracy values for high QC samples range from 0.9 to 8% and -31 to -8%. Results from urine specimens of actual exposure to drugs screened using the SPME DESI-MS/MS method showed good agreement with the conventional immunoassays and GC/MS analysis. Liquid desorption of the SPME fiber followed by LC/MS/MS also showed good agreement with the SPME DESI-MS/MS method.

  5. An exploratory mixed-methods crossover study comparing DVD- vs. Web-based patient decision support in three conditions: The importance of patient perspectives.

    PubMed

    Halley, Meghan C; Rendle, Katharine A S; Gillespie, Katherine A; Stanley, Katherine M; Frosch, Dominick L

    2015-12-01

    The last 15 years have witnessed considerable progress in the development of decision support interventions (DESIs). However, fundamental questions about design and format of delivery remain. An exploratory, randomized mixed-method crossover study was conducted to compare a DVD- and Web-based DESI. Randomized participants used either the Web or the DVD first, followed by the alternative format. Participants completed a questionnaire to assess decision-specific knowledge at baseline and a questionnaire and structured qualitative interview after viewing each format. Tracking software was used to capture Web utilization. Transcripts were analyzed using integrated inductive and deductive approaches. Quantitative data were analyzed using exploratory bivariate and multivariate analyses. Exploratory knowledge analyses suggest that both formats increased knowledge, with limited evidence that the DVD increased knowledge more than the Web. Format preference varied across participants: 44% preferred the Web, 32% preferred the DVD and 24% preferred 'both'. Patient discussions of preferences for DESI information structure and the importance of a patients' stage of a given decision suggest these characteristics may be important factors underlying variation in utilization, format preferences and knowledge outcomes. Our results suggest that both DESI formats effectively increase knowledge. Patients' perceptions of these two formats further suggest that there may be no single 'best' format for all patients. These results have important implications for understanding why different DESI formats might be preferable to and more effective for different patients. Further research is needed to explore the relationship between these factors and DESI utilization outcomes across diverse patient populations. © 2014 John Wiley & Sons Ltd.

  6. Identification of effective substrates for the direct analysis of lipids from cell lines using desorption electrospray ionization mass spectrometry.

    PubMed

    Srimany, Amitava; Jayashree, Balasubramanyam; Krishnakumar, Subramanian; Elchuri, Sailaja; Pradeep, Thalappil

    2015-02-28

    Various disease conditions, particularly tumours, can be understood easily by studying changes in the lipid profile of cells. While lipid profiles of tissues have been recorded by desorption electrospray ionization mass spectrometric (DESI-MS) imaging, there is paucity in standardized protocols for sample preparation involving cell cultures to generate reliable results. In this study, we report a method for the direct analysis of lipids from cultured cells by incorporating them onto Whatman 42 filter paper as a substrate for reliable DESI-MS analysis. The WERI-RB1 cell line was spotted on commonly used substrates for DESI-MS analysis, such as glass slides, Teflon coated glass slides, thin layer chromatography (TLC) plates, and Whatman 42 filter paper. A comparison of mass spectrometric images with two different lipids was made to understand the behaviour of different surfaces when the same sample was spotted on them. Relative intensities of different lipid peaks in the WERI-RB1 cell line were compared and relative lipid abundances were also compared across two different human retinoblastoma cell lines; WERI-RB1 and Y79. The study demonstrates that good lipid signals can be obtained by DESI-MS when the cells are spotted on Whatman 42 filter paper. Tandem mass spectrometry was performed to identify the lipids as glycerophosphocholines (PC). Better lipid images from assembly of cells were obtained with distinct boundary when they were spotted on Whatman 42 filter paper than other surfaces. We demonstrate the use of a simple substrate for reliable DESI-MS analysis of cultured cells. This method has the potential to understand various interactions of cells with other external agents. The current method would help in the application of DESI-MS for biology in general and medical sciences in particular. Copyright © 2015 John Wiley & Sons, Ltd.

  7. Quantifying the performance of charge-coupled devices in ambient conditions - Oral presentation

    SciTech Connect

    Dungee, Ryan

    2015-08-22

    Telescope surveys have given us a great deal of information about our universe, but the images they capture carry with them an inherent limitation. The question then is how do we take this information to the next level? The answer: the Dark Energy Spectroscopic Instrument (DESI). DESI is an instrument that will measure the distance to tens of millions of galaxies in our night sky. This information can be combined with already existing images to construct a three dimensional map of our universe providing a great deal of new opportunities for cosmological research. The DESI guidance system consists of 10 detectors called charge-coupled devices (CCDs). Each CCD is made of silicon atoms that emit electrons when struck with light, the electrons are counted and then used to reconstruct an image. But, CCDs suffer from an issue known as ‘dark current’ which are false counts that come from thermal motions of the silicon atoms. This is particularly problematic since they contribute to the uncertainty of a measurement without contributing to our signal. This causes a drop in the signal to noise ratio, a value that needs to be maximized in order to meet DESI’s high precision requirements. This summer was spent ensuring the DESI guidance system would meet its specifications. Data was collected using a CCD of the same type that would be used on DESI and the effectiveness of dark current removal was tested. Exposures were taken for a wide range of temperatures and exposure lengths and a number of dark current removal methods were implemented. While further testing is required, the initial results are quite promising and the DESI guidance system is on track to meet its specifications

  8. Testing an e2v CCD230-42 sensor for dark current performance at ambient temperatures - Final Paper

    SciTech Connect

    Dungee, Ryan

    2015-08-20

    The design of the Guidance Focus and Alignment (GFA) system for the Dark Energy Spectroscopic Instrument (DESI) project calls for a set of charge-coupled devices (CCDs) which operate at ambient temperature. Here we assess the performance of these CCDs under such conditions. Data was collected from –21°C to 28°C and used to determine the effect of temperature on the effectiveness of dark current subtraction. Comparing the dark current uncertainty to our expected signal has shown that the DESI design specifications will be met without need for significant changes.

  9. Fast helicity switching of x-ray circular polarization at beamline P09 at PETRA III

    SciTech Connect

    Strempfer, J. Mardegan, J. R. L.; Francoual, S.; Veiga, L. S. I.; Spitzbart, T.; Zink, H.; Bouchenoire, L.

    2016-07-27

    At the resonant scattering and diffraction beamline P09 at PETRA III/DESY, polarization manipulation in the X-ray energy range 3-13 keV is possible using wave-plates. Recently, fast flipping of circular polarization helicity using the Raspberry Pi controlled FPGA (PiLC) device developed at DESY and dedicated piezo-electric flippers has been commissioned. Functionality of the PiLC for XMCD and first XMCD measurements at the Fe K-and Dy-L{sub 3} absorption edges are presented.

  10. Gas Electron Multiplier Tracking Telescopes for OLYMPUS

    NASA Astrophysics Data System (ADS)

    McMahon, Joshua; Campbell, Miles

    2011-10-01

    The OLYMPUS collaboration is conducting an experiment to measure two-photon contributions to elastic electron scattering. The experiment is taking place at the DORIS storage ring at DESY, Hamburg, Germany using the upgraded BLAST detector from the MIT-Bates Linear Accelerator Center. Gas Electron Multiplier (GEM) telescopes are used to detect scattered leptons at a forward angle to monitor the luminosity. The GEM detectors have been commissioned at the test facility at DESY and were installed along with the main detector in the DORIS storage ring. With the testbeam the performance characteristics such as gain, efficiency, multiplicity, and resolution of the GEMs were studied.

  11. Beam tests of a MWPC with CsI photocathode for Cherenkov Ring Imaging

    SciTech Connect

    Krizan, P.; Staric, M.; Stanovnik, A.; Cindro, M.; Skrk, D.; Zavrtanik, M.; Korpar, S.; Hamacher, T.; Michel, E.

    1995-08-01

    A 24 x 24 cm{sup 2} asymmetric multiwire proportional chamber, with 7.5 x 7.5 mm{sup 2} photosensitive CsI pads, has been tested with Cherenkov radiation of 3 GeV/c electrons in the T24 test beam at DESY. The performance of the chamber with specially designed low-noise, charge-sensitive preamplifiers is described. The parameters of the CsI-MWPC are compared to those of a TMAE photon detector in order to evaluate their potential as Ring Imaging Cherenkov (RICH) counters for the HERA-B experiment at DESY.

  12. Spectral radiance calibrations between 165-300 nm - An interlaboratory comparison

    NASA Technical Reports Server (NTRS)

    Bridges, J. M.; Ott, W. R.; Pitz, E.; Schulz, A.; Einfeld, D.; Stuck, D.

    1977-01-01

    The spectral radiance of deuterium lamps calibrated by the Max-Planck-Institut fuer Astronomie (MPI), by the U.S. National Bureau of Standards (NBS), and by the Physikalisch-Technische Bundesanstalt (PTB) are compared to check the agreement of UV radiometric scales. The NBS group used the optically thin continuum radiation from a wall-stabilized hydrogen arc as its fundamental radiometric standard, while the MPI and PTB groups used the synchrotron radiation facility in DESY. It is found that the spectral radiance scales based upon the DESY synchrotron and the NBS hydrogen arc are consistent, at least for one wavelength relative to another.

  13. Production and test results of SC 3.9-GHz accelerating cavity at Fermilab

    SciTech Connect

    Khabiboulline, Timergali; Cooper, Charlie; Edwards, Helen; Foley, Mike; Gonin, Ivan; Mitchell, Donald; Olis, D.; Rowe, Allan; Salman, Tariq; Solyak, Nikolay; /Fermilab

    2006-08-01

    The 3rd harmonic 3.9GHz accelerating cavity was proposed to improve beam performances for TTF-FEL facility. In the frame of collaboration Fermilab will provide DESY with a cryomodule containing a string of four cavities. In addition, a second cryomodule with one cavity will be fabricated for installation in the Fermilab photo-injector, which will be upgraded for the ILC accelerator test facility. In this paper we discuss the status of the cavity and coupler production and the first result of cavity tests. It is hoped that this project will be completed during the first half of 2007 and the cryomodule delivered to DESY in this time span.

  14. Project summary

    SciTech Connect

    Dungee, Ryan

    2015-08-22

    Telescope surveys have given us a great deal of information about our universe, but the images they capture carry with them an inherent limitation. The question then is how do we take this information to the next level? The answer: the Dark Energy Spectroscopic Instrument (DESI). DESI is an instrument that will measure the distance to tens of millions of galaxies in our night sky. This information can be combined with already existing images to construct a three dimensional map of our universe providing a great deal of new opportunities for cosmological research.

  15. Fahrerassistenzsysteme mit maschineller Wahrnehmung

    NASA Astrophysics Data System (ADS)

    Maurer, Markus; Stiller, Christoph

    Fahrerassistenzsysteme unterstützen den Fahrer in seiner Fahraufgabe und entlasten ihn dadurch gezielt. Viele Experten erwarten, dass Fahrerassistenzsysteme zur Sicherheit des Straßenverkehrs wesentlich beitragen werden. Zentrale wissenschaftliche und industrielle Herausforderungen bestehen zur Zeit in der Erforschung und Entwicklung maschineller Wahrnehmungsfähigkeiten, die eine angemessene Erfassung der Umwelt und deren fahrergerechte Integration in geeignete Fahrfunktionen leisten. Dieser Band basiert auf ausgewählten Vorträgen eines. Workshops in Walting (Altmühltal) und macht deren Inhalt in erweiterter Fassung zugänglich.

  16. Bibliographic Resources for the Historian of Astronomy

    NASA Astrophysics Data System (ADS)

    Corbin, B. G.

    1999-12-01

    Many large library collections now have online bibliographic catalogs on the web. These provide many hidden resources for the historian of astronomy. Special searching techniques will allow the historian to scan bibliographic records of hundreds of entries relating to biographies of astronomers, collected works of astronomers, ancient and medieval astronomy and many other historical subjects. Abstract databases such as the Astrophysics Data System and ARIBIB are also adding much historical bibliographic information. ARIBIB will eventually contain scanned images of the Astronomischer Jahresbericht containing bibliographic entries for all literature of astronomy from 1899 to 1968 and Astronomy and Astrophysics Abstracts from 1969 to present. Commercial services such as UnCover and FirstSearch provide a means of reaching bibliographic entries for journal and book literature in the history of astronomy which were not easily located in the past. A broad overview of these collections and services will be given, and searching techniques for finding ``hidden" bibliographic data will be presented. Web page addresses will be given for all sources covered.

  17. PHYTOREMEDIATION OF DREDGED SEDIMENTS: A CASE STUDY AT THE JONES ISLAND CDF

    EPA Science Inventory

    The Jones Island Confined Disposal Facility (CDF) is a 44 acre in-lake area that receives dredged material from Milwaukee Harbor and the surrounding waterways. Some of those materials are contaminated with industrial waste and urban run-off. The CDF is nearing the end of its desi...

  18. Formalization of the Program Reference Language.

    DTIC Science & Technology

    1985-10-08

    not be co ; strued as an official i)eoartment of the Air Force position, policy, or decision, uniess !,, desiL.rated by other official documentation...contains fn lp) IFx (contains ip if) ]J ]) --> ( [ (contains fn ip) (contains lp Sfnlp)

  19. Stream and River Condition Across the BLM's National System of Public Lands.

    EPA Science Inventory

    The Bureau of Land Management (BLM), in collaboration with the U.S. Environmental Protection Agency, conducted the first ever Western Rivers and Streams Assessment (WRSA), a survey of the condition of BLM streams and rivers throughout the contiguous western U.S. The WRSA was desi...

  20. DEVELOPMENTAL TOXICITY OF ATRAZINE METABOLITES IN FISCHER 344 RATS

    EPA Science Inventory

    Previously we have shown that atrazine, a commonly used herbicide, causes full-litter resorption (FLR) in Fischer 344 rats at 50 mg/kg. In this study, we tested four atrazine metabolites for their potential to cause FLR and developmental toxicity. Desethylatrazine (DEA), desis...

  1. 15 CFR 711.8 - How to request authorization from BIS to make electronic submissions of declarations or reports.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... submissions must be made through the Web-Data Entry System for Industry (Web-DESI), which can be accessed on the CWC web site at www.cwc.gov. (b) Authorization. If you or your company has a facility, plant site... information required for submitting electronic declarations and reports may be found on BIS's Web site at...

  2. AN INDICATOR OF POTENTIAL STREAM WOOD CONTRIBUTION FOR RIPARIAN FORESTS

    EPA Science Inventory

    In northwestern Oregon a key function of riparian forests is to provide wood to the stream network. This function is a prominent feature of Federal and State forest practices in the region. Thus, defining indicators which are associated with this function are important for desi...

  3. Stream and River Condition Across the BLM's National System of Public Lands.

    EPA Science Inventory

    The Bureau of Land Management (BLM), in collaboration with the U.S. Environmental Protection Agency, conducted the first ever Western Rivers and Streams Assessment (WRSA), a survey of the condition of BLM streams and rivers throughout the contiguous western U.S. The WRSA was desi...

  4. Simple sequence repeat markers that identify Claviceps species and strains

    USDA-ARS?s Scientific Manuscript database

    Claviceps purpurea is a pathogen that infects most members of the Pooideae subfamily and causes ergot, a floral disease in which the ovary is replaced with a sclerotium. This study was initiated to develop Simple Sequence Repeat (SSRs) markers for rapid identification of C. purpurea. SSRs were desi...

  5. PHYTOREMEDIATION OF DREDGED SEDIMENTS: A CASE STUDY AT THE JONES ISLAND CDF

    EPA Science Inventory

    The Jones Island Confined Disposal Facility (CDF) is a 44 acre in-lake area that receives dredged material from Milwaukee Harbor and the surrounding waterways. Some of those materials are contaminated with industrial waste and urban run-off. The CDF is nearing the end of its desi...

  6. A Methodology for Formal Hardware Verification, with Application to Microprocessors.

    DTIC Science & Technology

    1993-08-29

    using the images (codomains) of functions which are represented as BDDs. Touati and colleagues [234] presents heuristics that improve performance. Hwang...the pass transistor exor gate. IEEE Transactions Computer-Aided Desi gn, 7(9):994-7, September 1988. [234] H. Touati , H. Savoj, B. Lin, R. Brayton

  7. Responses of late-lactation cows to forage substitutes in low-forage diets supplemented with by-products

    USDA-ARS?s Scientific Manuscript database

    In response to drought-induced shortages of forage and increased corn and soy prices, a study was conducted to evaluate lactation response of dairy cows to lower-forage diets supplemented with forage substitutes and with byproduct feeds entirely substituted for corn grain and soybean feeds. The desi...

  8. Cosmology with the cosmic web

    NASA Astrophysics Data System (ADS)

    Forero-Romero, J. E.

    2017-07-01

    This talk summarizes different algorithms that can be used to trace the cosmic web both in simulations and observations. We present different applications in galaxy formation and cosmology. To finalize, we show how the Dark Energy Spectroscopic Instrument (DESI) could be a good place to apply these techniques.

  9. C4 grasses prosper as carbon dioxide eliminates desiccation in warmed semi-arid grasslands

    USDA-ARS?s Scientific Manuscript database

    Global warming is predicted to induce desiccation in many world regions through increases in evaporative demand. Rising CO2 may counter that trend by improving plant water use efficiency (WUE). However, it is not clear how important this CO2-enhanced WUE might be in off-setting warming-induced desi...

  10. Design, fabrication and test of a microfluidic nebulizer chip for desorption electrospray ionization mass spectrometry

    PubMed Central

    Sen, A K; Darabi, J; Knapp, D R

    2009-01-01

    This paper presents design, microfabrication, and test of a microfluidic nebulizer chip for desorption electrospray ionization mass spectrometry (DESI-MS) in proteomic analysis. The microfluidic chip is fabricated using cyclic olefin copolymer (COC) substrates. The fluidic channels are thermally embossed onto a base substrate using a nickel master and then a top substrate is thermally bonded to seal the channels. Carbon ink embossed into the top COC substrate is used to established electrical connection between the external power supply and the liquid in the channel. The microfluidic chip to external capillary connection is fabricated using Nanoport™ interconnection system. Preliminary leakage test was performed to demonstrate the interconnection system is leak-free and pressure test was performed to evaluate the burst pressure. Finally, the nebulizer chip was used to perform DESI-MS for analyzing peptides (BSA and bradykinin) and reserpine on the nanoporous alumina surface. DESI-MS performance of the microfluidic nebulizer chip is compared with that obtained using a conventional DESI nebulizer. PMID:20161284

  11. High-Resolution Desorption Electrospray Ionization Mass Spectrometry for Chemical Characterization of Organic Aerosols

    SciTech Connect

    Laskin, Julia; Laskin, Alexander; Roach, Patrick J.; Slysz, Gordon W.; Anderson, Gordon A.; Nizkorodov, Serguei; Bones, David L.; Nguyen, Lucas

    2010-03-01

    Characterization of the chemical composition and chemical transformations of secondary organic aerosol (SOA) is both a major challenge and the area of greatest uncertainty in current aerosol research. This study presents the first application of desorption electrospray ionization combined with high-resolution mass spectrometry (DESI-MS) for detailed chemical characterization and studies of chemical aging of OA collected on Teflon substrates. DESI-MS offers unique advantages both for detailed characterization of chemically labile components in OA that cannot be detected using more traditional electrospray ionization mass spectrometry (ESI-MS) and for studying chemical aging of OA. DESI-MS enables rapid characterization of OA samples collected on substrates by eliminating the sample preparation stage. In addition, it enables detection and structural characterization of chemically labile molecules in OA samples by minimizing the residence time of analyte in the solvent. SOA produced by the ozonolysis of limonene (LSOA) was allowed to react with gaseous ammonia. Chemical aging resulted in measurable changes in the optical properties of LSOA observed using UV- visible spectroscopy. DESI-MS combined with tandem mass spectrometry experiments (MS/MS) enabled identification of species in aged LSOA responsible for absorption of the visible light. Detailed analysis of the experimental data allowed us to identify chemical changes induced by reactions of LSOA constituents with ammonia and distinguish between different mechanisms of chemical aging.

  12. East Indian Families Raising ABCD Adolescents: Cultural and Generational Challenges

    ERIC Educational Resources Information Center

    Poulsen, Shruti S.

    2009-01-01

    Immigration is a process fraught with both challenges and opportunities for families. In particular, East Indian families with U.S.-born adolescents experience the challenges of bridging cultures across generational divides; they are perceived by others as confused, identity less, and conflicted or as American-Born, Confused Desis (ABCDs). This…

  13. INDOOR AIR QUALITY AND INHALATION EXPOSURE - SIMULATION TOOL KIT

    EPA Science Inventory

    A Microsoft Windows-based indoor air quality (IAQ) simulation software package is presented. Named Simulation Tool Kit for Indoor Air Quality and Inhalation Exposure, or IAQX for short, this package complements and supplements existing IAQ simulation programs and is desi...

  14. Constant-Distance Mode Nanospray Desorption Electrospray Ionization Mass Spectrometry Imaging of Biological Samples with Complex Topography.

    PubMed

    Nguyen, Son N; Liyu, Andrey V; Chu, Rosalie K; Anderton, Christopher R; Laskin, Julia

    2017-01-17

    A new approach for constant-distance mode mass spectrometry imaging (MSI) of biological samples using nanospray desorption electrospray ionization (nano-DESI) was developed by integrating a shear-force probe with the nano-DESI probe. The technical concept and basic instrumental setup, as well as the general operation of the system are described. Mechanical dampening of resonant oscillations due to the presence of shear forces between the probe and the sample surface enabled the constant-distance imaging mode via a computer-controlled closed-feedback loop. The capability of simultaneous chemical and topographic imaging of complex biological samples is demonstrated using living Bacillus subtilis ATCC 49760 colonies on agar plates. The constant-distance mode nano-DESI MSI enabled imaging of many metabolites, including nonribosomal peptides (surfactin, plipastatin, and iturin) on the surface of living bacterial colonies, ranging in diameter from 10 to 13 mm, with height variations up to 0.8 mm above the agar plate. Co-registration of ion images to topographic images provided higher-contrast images. Based on this effort, constant-mode nano-DESI MSI proved to be ideally suited for imaging biological samples of complex topography in their native states.

  15. AN INDICATOR OF POTENTIAL STREAM WOOD CONTRIBUTION FOR RIPARIAN FORESTS

    EPA Science Inventory

    In northwestern Oregon a key function of riparian forests is to provide wood to the stream network. This function is a prominent feature of Federal and State forest practices in the region. Thus, defining indicators which are associated with this function are important for desi...

  16. Mapping the biological condition of USA rivers and streams

    EPA Science Inventory

    We predicted the probable (pr) biological condition (BC) of ~5.4 million km of stream within the conterminous USA (CONUS). National maps of prBC could provide an important tool for prioritizing monitoring and restoration of streams. The USEPA uses a spatially balanced survey desi...

  17. An Empirical Study of Earth Covered Schools in Oklahoma.

    DTIC Science & Technology

    1979-11-01

    structures; comparative construction, desi*gn, and real estate costs; energy; disaster protection factors including radiation and blast protection...Invisibility Physiological Comfort (allergies) Accessibility (handicapped) Economic Factors Initial costs Real Estate Design & Construction Operation and...archives to compare design and construction costs, obtained estimates of current land values to examine real estate cost-s, and obtained data on

  18. TESLA FEL Gun simulations with PARMELA and MAFIA

    SciTech Connect

    Zhang Min; Schuett, Petra

    1997-02-01

    The most recent simulation results of the DESY TESLA FEL gun are presented. Two codes are used: PARMELA and MAFIA. Since the two use different schemes in particle simulations, we will address their differences and try to give an explanation for them.

  19. TESLA FEL Gun simulations with PARMELA and MAFIA

    SciTech Connect

    Zhang, M.; Schuett, P.

    1997-02-01

    The most recent simulation results of the DESY TESLA FEL gun are presented. Two codes are used: PARMELA and MAFIA. Since the two use different schemes in particle simulations, we will address their differences and try to give an explanation for them. {copyright} {ital 1997 American Institute of Physics.}

  20. Effects of Early Serotonin Programming on Fear Response, Memory and Aggression

    USDA-ARS?s Scientific Manuscript database

    The neurotransmitter serotonin (5-HT) also acts as a neurogenic compound in the developing brain. Early administration of a 5-HT agonist could alter development of serotonergic circuitry, altering behaviors mediated by 5-HT signaling, including memory, fear and aggression. The present study was desi...

  1. 15 CFR 711.8 - How to request authorization from BIS to make electronic submissions of declarations or reports.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... passwords for facilities, plant sites and trading companies (USC password) and Web-DESI user accounts (user name and password). (i) Each person, facility, plant site or trading company authorized to submit declarations and reports electronically will be assigned a password (USC password) that must be used...

  2. 15 CFR 711.8 - How to request authorization from BIS to make electronic submissions of declarations or reports.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... passwords for facilities, plant sites and trading companies (USC password) and Web-DESI user accounts (user name and password). (i) Each person, facility, plant site or trading company authorized to submit declarations and reports electronically will be assigned a password (USC password) that must be used...

  3. 15 CFR 711.8 - How to request authorization from BIS to make electronic submissions of declarations or reports.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... passwords for facilities, plant sites and trading companies (USC password) and Web-DESI user accounts (user name and password). (i) Each person, facility, plant site or trading company authorized to submit declarations and reports electronically will be assigned a password (USC password) that must be used...

  4. Transient decrements in mood during energy deficit are independent of dietary protein-to-carbohydrate ratio

    USDA-ARS?s Scientific Manuscript database

    Energy deficit and dietary macronutrient intake are thought to independently modulate cognition, mood and sleep. To what extent manipulating the dietary ratio of protein-to-carbohydrate affects mood, cognition and sleep during short-term energy deficit is undetermined. Using a randomized, block desi...

  5. OCELOT: A software framework for synchrotron light source and FEL studies

    NASA Astrophysics Data System (ADS)

    Agapov, I.; Geloni, G.; Tomin, S.; Zagorodnov, I.

    2014-12-01

    OCELOT is a novel multiphysics simulation toolkit, which has been in development at European XFEL in collaboration with NRC Kurchatov Institute and DESY since 2011. In this paper we describe its architecture, implementation, and applications in the area of synchrotron light sources and FELs.

  6. DESIGN CONSIDERATIONS FOR THE MECHANICAL TUNER OF THE RHIC ELECTRON COOLER RF CAVITY.

    SciTech Connect

    RANK, J.; BEN-ZVI,I.; HAHN,G.; MCINTYRE,G.; DALY,E.; PREBLE,J.

    2005-05-16

    The ECX Project, Brookhaven Lab's predecessor to the RHIC e-Cooler, includes a prototype RF tuner mechanism capable of both coarse and fast tuning. This tuner concept, adapted originally from a DESY design, has longer stroke and significantly higher loads attributable to the very stiff ECX cavity shape. Structural design, kinematics, controls, thermal and RF issues are discussed and certain improvements are proposed.

  7. Effects of bale feeder type and supplementation of monensin on hay waste, intake, and performance of beef cattle

    USDA-ARS?s Scientific Manuscript database

    The effects of feeder type and supplemental monensin on hay utilization in beef cows was investigated using 56 crossbred beef cows (BW= 494 ± 50 kg; BCS= 5.2 ± 0.5) in a split-plot treatment arrangement with a completely randomized design. Supplement treatment served as the main plot and feeder desi...

  8. On-probe atmospheric pressure thermal desorption-ESI-MS for the analysis of volatile analytes or volatile pryolysis products

    USDA-ARS?s Scientific Manuscript database

    An on-probe pyrolyzer has been constructed and interfaced with desorption electrospray ionization (DESI) mass spectrometry (MS) for the rapid analysis of non-volatile pyrolysis products. The detection and analysis of non-volatile pyrolysis products of peptides, proteins and the synthetic polymer pol...

  9. CHILDREN'S ENVIRONMENTAL HEALTH RESEARCH - EPA AND DHHS COLLABORATE TO ADDRESS LONG-TERM HEALTH ISSUES

    EPA Science Inventory

    Children's environmental health is important to the mission of both the U.S. Department of Health and Human Services (DHHS) and the U.S. Environmental Protection Agency (EPA). Over the past seven years, federal experts from a variety of disciplines including survey sampling desi...

  10. FormCalc 9 and Extensions

    NASA Astrophysics Data System (ADS)

    Hahn, T.; Paβehr, S.; Schappacher, C.

    2016-10-01

    We present Version 9 of the Feynman-diagram calculator FormCalc and a flexible new suite of shell scripts and Mathematica packages based on FormCalc, which can be adapted and used as a template for calculations. Report DESY 2016-060, MPP-2016-63

  11. Genetic variation of a global germplasm collection of chickpea (Cicer arietinum L.) including Italian accessions at risk of genetic erosion.

    PubMed

    De Giovanni, C; Pavan, S; Taranto, F; Di Rienzo, V; Miazzi, M M; Marcotrigiano, A R; Mangini, G; Montemurro, C; Ricciardi, L; Lotti, C

    2017-01-01

    Chickpea (Cicer arietinum L.) is one of the most important legumes worldwide. We addressed this study to the genetic characterization of a germplasm collection from main chickpea growing countries. Several Italian traditional landraces at risk of genetic erosion were included in the analysis. Twenty-two simple sequence repeat (SSR) markers, widely used to explore genetic variation in plants, were selected and yielded 218 different alleles. Structure analysis and hierarchical clustering indicated that a model with three distinct subpopulations best fits the data. The composition of two subpopulations, named K1 and K2, broadly reflects the commercial classification of chickpea in the two types desi and kabuli, respectively. The third subpopulation (K3) is composed by both desi and kabuli genotypes. Italian accessions group both in K2 and K3. Interestingly, this study highlights genetic distance between desi genotypes cultivated in Asia and Ethiopia, which respectively represent the chickpea primary and the secondary centres of diversity. Moreover, European desi are closer to the Ethiopian gene pool. Overall, this study will be of importance for chickpea conservation genetics and breeding, which is limited by the poor characterization of germplasm collection.

  12. System-Events Toolbox--Activating Urban Places for Social Cohesion through Designing a System of Events That Relies on Local Resources

    ERIC Educational Resources Information Center

    Fassi, Davide; Motter, Roberta

    2014-01-01

    This paper is a reflection on the use of public spaces in towns and the development of a system-events toolbox to activate them towards social cohesion. It is the result of a 1 year action research developed together with POLIMI DESIS Lab of the Department of Design to develop design solutions to open up the public spaces of the campus to the…

  13. Report on first TESLA window assembly test

    SciTech Connect

    Sun, D.; Koepke, K.

    1993-10-01

    RF input couplers for the superconducting cavities of the TESLA are under development at DESY and Fermilab. The coaxial part of the Fermilab input coupler has been tested up to 1.7 MW at Fermilab using 805 MHz rf power source. The test results, procedure and test setup are described.

  14. Review of studies on conventional linear colliders in the S- and X-Band regime

    SciTech Connect

    Loew, G.A.

    1992-07-01

    This paper gives a status report on the conventional approaches to linear colliders at DESY, KEK, SLAC and INP-Protvino in the S- and X-Band regime. Critical topics are reviewed and a discussion of global issues such as future R&D requirements is included.

  15. Review of studies on conventional linear colliders in the S- and X-Band regime

    SciTech Connect

    Loew, G.A.

    1992-07-01

    This paper gives a status report on the conventional approaches to linear colliders at DESY, KEK, SLAC and INP-Protvino in the S- and X-Band regime. Critical topics are reviewed and a discussion of global issues such as future R D requirements is included.

  16. Designing Computer Software To Minimize the Need for Employee Training.

    ERIC Educational Resources Information Center

    Winiecki, Donald J.

    2000-01-01

    Discusses problems that arise when computer software users have to learn a new system while maintaining productivity. Highlights include active learning; a constructivist view; Vygotsky's zone of proximal development; and a model called Design for Learnability (DesiL) that focuses the performance technologist on an ethnomethodological study of…

  17. R and M (Reliability and Maintainability) Quality Team Concept and C-17 Design at Douglas Aircraft Company: An R and M 2000 Initiative Case Study

    DTIC Science & Technology

    1988-09-01

    Force, or the Department of Defense. AFIT/GrM/tSM/88S-56 WM QJALITY TEAM COCEPT AND C-17 DESI(G AT DOUGLAS AIRAFT COMPANY: Presented to the Faculty...and engineering design teams promoted dialogue on system engineering issues and encouraged an integrated approach to C-17 design. However, these

  18. NATIONAL LAKE ASSESSMENT MONITORING DESIGN

    EPA Science Inventory

    The USEPA designed the National Lake Assessment in 2005-6 with field sampling being completed in 2007. The objective of the assessment is to estimate the ecological condition of lakes and reservoirs nationally. The objective of this paper is to describe the national survey desi...

  19. Planning the installation of the Dark Energy Spectroscopic Instrument on the NOAO Mayall telescope

    NASA Astrophysics Data System (ADS)

    Allen, Lori; Sprayberry, David; Blum, Robert D.; Probst, Ron; Joyce, Richard R.; Dey, Arjun; Evatt, Matt; Marshall, Bob; Besuner, Robert; Jelinsky, Pat; Lafever, Robin; Bebek, Chris; Flaugher, Brenna; DESI Collaboration

    2015-01-01

    The NOAO Nicholas U. Mayall 4-meter telescope located at Kitt Peak National Observatory in Arizona is to be the host facility for the Dark Energy Spectroscopic Instrument (DESI). DESI will record broadband spectra simultaneously for 5000 objects distributed over a 3-degree diameter field of view; it will record the spectra of approximately 20 million galaxies and quasi-stellar objects during a five-year survey. This survey will improve the combined precision of measurement on the dark energy equation of state today (w0) and its evolution with redshift (wa) by approximately a factor of ten. Installation of DESI on the telescope is a complex procedure, involving a complete replacement of the telescope top end, routing of massive fiber cables, and installation of banks of spectrographs in an environmentally-controlled lab area within the dome. Furthermore, assembly of the instrument and major subsystems must be carried out on-site given their size and complexity. A detailed installation plan is being developed early in the project in order to ensure that DESI and its sub-systems are designed so they can be safely and efficiently installed, and to ensure that all telescope and facility modifications to enable installation are identified and completed in time.

  20. Planning the installation of the dark energy spectroscopic instrument on the Mayall Telescope

    NASA Astrophysics Data System (ADS)

    Sprayberry, D.; Goble, W.; Allen, L.; Elias, J.; Probst, R.; Joyce, R.; Dey, A.; Marshall, R.; Evatt, M.; Blum, R.; Abbott, T. M. C.; Walker, A.; Muñoz, F.; Besuner, R.; Sholl, M.; Jelinsky, P.; Silber, J.; Lafever, R.; Bebek, C.; Flaugher, B.

    2014-07-01

    The KPNO Nicholas U. Mayall 4-meter telescope is to be the host facility for the Dark Energy Spectroscopic Instrument (DESI). DESI will record broadband spectra simultaneously for 5000 objects distributed over a 3-degree diameter field of view; it will record the spectra of approximately 20 million galaxies and quasi-stellar objects during a five-year survey. This survey will improve the combined precision of measurement on the dark energy equation of state today (w0) and its evolution with redshift (wa) by approximately a factor of ten over existing spectroscopy baryon acoustic oscillation surveys (e.g., BOSS1) in both co-moving volume surveyed and number of galaxies mapped. Installation of DESI on the telescope is a complex procedure, involving a complete replacement of the telescope top end, routing of massive fiber cables, and installation of banks of spectrographs in an environmentally-controlled lab area within the dome. Furthermore, assembly of the instrument and major subsystems must be carried out on-site given their size and complexity. A detailed installation plan is being developed early in the project in order to ensure that DESI and its subsystems are designed so they can be safely and efficiently installed, and to ensure that all telescope and facility modifications required to enable installation are identified and completed in time.

  1. Workforce Issues of the 21st Century: The People CMM to the Rescue

    DTIC Science & Technology

    2008-07-01

    Competency 27SEI Webinar August 2008 Buttles and Wemyss Software Engineer IV Application domain Procedural design Cobol & assembler Numerical analysis...Procedu al design Cobol & assembler Numerical analysis Knowledge: Requir ments nalysis System desi n Project management debugging Skills: Integrated...Procedural design Cobol & assembler Numerical analysis Knowledge: Requirements analysis System desig Project m nagement debug ing Skills: Integrated team

  2. Current and Emerging Water Distribution Main Renewal Technologies

    EPA Science Inventory

    The funding needed to address aging underground infrastructure renewals range as high as $325 billion over the next 20 years and with the current annual replacement rate at 0.5%, pipes are being expected to last for 200 years, which is unreasonable considering most pipes are desi...

  3. Direct analysis of ethylenediaminetetraacetic acid (EDTA) on concrete by reactive-desorption electrospray ionization mass spectrometry.

    PubMed

    Lebeau, D; Reiller, P E; Lamouroux, C

    2015-01-01

    Analysis of organic ligands such as ethylenediaminetetraacetic acid (EDTA) is today an important challenge due to their ability to increase the mobility of radionuclides and metals. Reactive desorption electrospray ionization mass spectrometry (reactive-DESI-MS) was used for direct analysis of EDTA on concrete samples. EDTA forms complexes and those with Fe(III) ions are among the most thermodynamically favored. This complexing capacity was used to improve the specific detection of EDTA directly on a concrete matrix by doping the solvent spray of DESI with a solution of FeCl3 to selectively create the complex between EDTA and Fe(III). Thus, EDTA sensitivity was largely improved by two orders of magnitude with reactive-DESI-MS experiments thanks to the specific detection of EDTA as a [EDTA-4H+Fe(III)](-) complex. The proof of principle that reactive DESI can be applied to concrete samples to detect EDTA has been demonstrated. Its capacity for semi-quantitative determination and localization of EDTA under ambient conditions and with very little sample preparation, minimizing sample manipulations and solvent volumes, two important conditions for the development of new methodologies in the field of analytical chemistry, has been shown.

  4. Current and Emerging Water Distribution Main Renewal Technologies

    EPA Science Inventory

    The funding needed to address aging underground infrastructure renewals range as high as $325 billion over the next 20 years and with the current annual replacement rate at 0.5%, pipes are being expected to last for 200 years, which is unreasonable considering most pipes are desi...

  5. On the identity of European Baridini (Coleoptera, Curculionoidea) named before 1832

    USDA-ARS?s Scientific Manuscript database

    Twenty-eight names of European weevils usually regarded as Baridini in the literature are checked. Neotypes are designated for Curculio coerulescens Scopoli 1763 (emend.), C. glaber Herbst 1784, C. chalybeus Gmelin 1790, C. laticollis Marsham 1802, and C. picicornis Marsham 1802. Lectotypes are desi...

  6. A new determination of the B 0 bar B^0 oscillation strength

    NASA Astrophysics Data System (ADS)

    Albrecht, H.; Ehrlichmann, H.; Hamacher, T.; Krüger, A.; Nau, A.; Nippe, A.; Reidenbach, M.; Schäfer, M.; Schröder, H.; Schulz, H. D.; Sefkow, F.; Wurth, R.; Appuhn, R. D.; Hast, C.; Herrera, G.; Kolanoski, H.; Lange, A.; Lindner, A.; Mankel, R.; Schieber, M.; Siegmund, T.; Spaan, B.; Thurn, H.; Töpfer, D.; Walther, A.; Wegener, D.; Paulini, M.; Reim, K.; Volland, U.; Wegener, H.; Mundt, R.; Oest, T.; Schmidt-Parzefall, W.; Funk, W.; Stiewe, J.; Werner, S.; Ball, S.; Gabriel, J. C.; Geyer, C.; Hölscher, A.; Hofmann, W.; Holzer, B.; Khan, S.; Knöpfle, K. T.; Spengler, J.; Britton, D. I.; Charlesworth, C. E. K.; Edwards, K. W.; Kapitza, H.; Krieger, P.; Kutschke, R.; Macfarlane, D. B.; Orr, R. S.; Patel, P. M.; Prentice, J. D.; Seidel, S. C.; Tsipolitis, G.; Tzamariudaki, K.; van de Water, R. G.; Yoon, T.-S.; Reßing, D.; Schael, S.; Schubert, K. R.; Strahl, K.; Waldi, R.; Weseler, S.; Boŝtjanĉiĉ, B.; Kernel, G.; Križan, P.; Križniĉ, E.; Podobnik, T.; Živko, T.; Cronström, H. I.; Jönsson, L.; Balagura, V.; Danilov, M.; Droutskoy, A.; Fominykh, B.; Golutvin, A.; Gorelov, I.; Ratnikov, F.; Lubimov, V.; Pakhlov, P.; Rostovtsev, A.; Semenov, A.; Semenov, S.; Shevchenko, V.; Soloshenko, V.; Tichomirov, I.; Zaitsev, Yu.; Childers, R.; Darden, C. W.

    1992-09-01

    Using the ARGUS detector at the e + e - storage ring DORIS II at DESY, a study of B 0 bar B^0 oscillations has been performed using three different techniques. Besides the standard dilepton method, charge correlations between D * mesons and one or two leptons have also been investigated. The mixing parameter r is determined to be (20.6±7.0)%.

  7. Search for b-->s.gluon in B meson decays

    NASA Astrophysics Data System (ADS)

    Albrecht, H.; Gläser, R.; Harder, G.; Krüger, A.; Nippe, A.; Oest, T.; Reidenbach, M.; Schäfer, M.; Schmidt-Parzefall, W.; Schröder, H.; Schulz, H. D.; Sefkow, F.; Wurth, R.; Appuhn, R. D.; Drescher, A.; Hast, C.; Herrera, G.; Kolanoski, H.; Lange, A.; Lindner, A.; Mankel, R.; Scheck, H.; Schweda, G.; Spaan, B.; Walther, A.; Wegener, D.; Paulini, M.; Reim, K.; Volland, U.; Wegener, H.; Funk, W.; Stiewe, J.; Werner, S.; Ball, S.; Gabriel, J. C.; Geyer, C.; Hölscher, A.; Hofmann, W.; Holzer, B.; Khan, S.; Spengler, J.; Charlesworth, C. E. K.; Edwards, K. W.; Frisken, W. R.; Kapitza, H.; Krieger, P.; Kutschke, R.; Macfarlane, D. B.; McLean, K. W.; Orr, R. S.; Parsons, J. A.; Patel, P. M.; Prentice, J. D.; Seidel, S. C.; Swain, J. D.; Tsipolitis, G.; Yoon, T.-S.; Davis, R.; Ruf, T.; Schael, S.; Schubert, K. R.; Strahl, K.; Waldi, R.; Weseler, S.; Boštjančič, B.; Kernel, G.; Križan, P.; Križnič, E.; Pleško, M.; Cronström, H. I.; Jönsson, L.; Nilsson, A. W.; Babaev, A.; Danilov, M.; Fominykh, B.; Golutvin, A.; Gorelov, I.; Lubimov, V.; Rostovtsev, A.; Semenov, A.; Semenov, S.; Shevchenko, V.; Soloshenko, V.; Tchistilin, V.; Tichomirov, I.; Zaitsev, Yu.; Childers, R.; Darden, C. W.; Argus Collaboration

    1991-01-01

    Using the ARGUS detector at the e +e - storage ring DORIS II at DESY, a search for penguin decays of B mesons involving b→s gluon has been performed. No evidence for the penguin mechanism was found and a number of upper limits are quoted.

  8. A search for the lepton-flavour violating decays τ → eα, τ → μα

    NASA Astrophysics Data System (ADS)

    Albrecht, H.; Hamacher, T.; Hofmann, R. P.; Kirchhoff, T.; Mankel, R.; Nau, A.; Nowak, S.; Reßing, D.; Schröder, H.; Schulz, H. D.; Walter, M.; Wurth, R.; Hast, C.; Kapitza, H.; Kolanoski, H.; Kosche, A.; Lange, A.; Lindner, A.; Schieber, M.; Siegmund, T.; Spaan, B.; Thurn, H.; Töpfer, D.; Wegener, D.; Eckstein, P.; Frankl, C.; Graf, J.; Schmidtler, M.; Schramm, M.; Schubert, K. R.; Schwierz, R.; Waldi, R.; Reim, K.; Wegener, H.; Eckmann, R.; Kuipers, H.; Mai, O.; Mundt, R.; Oest, T.; Reiner, R.; Schmidt-Parzefall, W.; Stiewe, J.; Werner, S.; Ehret, K.; Hofmann, W.; Hüpper, A.; Knöpfle, K. T.; Spengler, J.; Kreger, P.; Macfarlane, D. B.; Prentice, J. D.; Saull, P. R. B.; Tzamariudaki, K.; van de Water, R. G.; Yoon, T.-S.; Schneider, M.; Weseler, S.; Kernel, G.; Križnič, P.; Podobnik, T.; Živko, T.; Balagura, V.; Barsuk, S.; Belyaev, I.; Chistov, R.; Danilov, M.; Eiges, V.; Gershtein, L.; Gershtein, Yu.; Golutvin, A.; Igonkina, O.; Korolko, I.; Kostina, G.; Litvintsev, D.; Pakhlov, P.; Semenov, S.; Snizhko, A.; Tichomirov, I.; Zaitsev, Yu.

    1995-03-01

    Lepton spectra in τ decays have been studied with the ARGUS detector at the e + e - storage ring DORIS II at DESY using the “pseudo-rest-frame” technique. We have improved upper limits for two-body τ-decays into a lepton and an unobservable particle.

  9. Observation of semileptonic decay

    NASA Astrophysics Data System (ADS)

    Albrecht, H.; Cronström, H. I.; Ehrlichmann, H.; Hamacher, T.; Hofmann, R. P.; Kirchhoff, T.; Nau, A.; Nowak, S.; Reidenbach, M.; Reiner, R.; Schröder, H.; Schulz, H. D.; Walter, M.; Wurth, R.; Appuhn, R. D.; Hast, C.; Kolanoski, H.; Lange, A.; Lindner, A.; Mankel, R.; Schieber, M.; Siegmund, T.; Spaan, B.; Thurn, H.; Töpfer, D.; Walther, A.; Wegener, D.; Paulini, M.; Reim, K.; Wegener, H.; Mundt, R.; Oest, T.; Schmidt-Parzefall, W.; Funk, W.; Stiewe, J.; Werner, S.; Ehret, K.; Hölscher, A.; Hofmann, W.; Hüpper, A.; Khan, S.; Knöpfle, K. T.; Spengler, J.; Britton, D. I.; Charlesworth, C. E. K.; Edwards, K. W.; Hyatt, E. R. F.; Kapitza, H.; Krieger, P.; Macfarlane, D. B.; Patel, P. M.; Prentice, J. D.; Saull, P. R. B.; Seidel, S. C.; Tzamariudaki, K.; van de Water, R. G.; Yoon, T.-S.; Reβing, D.; Schmidtler, M.; Schneider, M.; Schubert, K. R.; Strahl, K.; Waldi, R.; Weseler, S.; Kernel, G.; Križan, P.; Križnič, E.; Podobnik, T.; Živko, T.; Jönsson, L.; Balagura, V.; Belyaev, I.; Danilov, M.; Droutskoy, A.; Golutvin, A.; Gorelov, I.; Kostina, G.; Lubimov, V.; Murat, P.; Pakhlov, P.; Ratnikov, F.; Semenov, S.; Shibaev, V.; Soloshenko, V.; Tichomirov, I.; Zaitsev, Yu.; Argus Collaboration

    1993-04-01

    Observation of the semileptonic decay of the charmed baryon ? in the decay channel ? has been made using the ARGUS detector at the e+e- storage ring DORIS II at DESY. The cross section times branching ratio was found to be ?.

  10. Common HEP UNIX Environment

    NASA Astrophysics Data System (ADS)

    Taddei, Arnaud

    After it had been decided to design a common user environment for UNIX platforms among HEP laboratories, a joint project between DESY and CERN had been started. The project consists in 2 phases: 1. Provide a common user environment at shell level, 2. Provide a common user environment at graphical level (X11). Phase 1 is in production at DESY and at CERN as well as at PISA and RAL. It has been developed around the scripts originally designed at DESY Zeuthen improved and extended with a 2 months project at CERN with a contribution from DESY Hamburg. It consists of a set of files which are customizing the environment for the 6 main shells (sh, csh, ksh, bash, tcsh, zsh) on the main platforms (AIX, HP-UX, IRIX, SunOS, Solaris 2, OSF/1, ULTRIX, etc.) and it is divided at several "sociological" levels: HEP, site, machine, cluster, group of users and user with some levels which are optional. The second phase is under design and a first proposal has been published. A first version of the phase 2 exists already for AIX and Solaris, and it should be available for all other platforms, by the time of the conference. This is a major collective work between several HEP laboratories involved in the HEPiX-scripts and HEPiX-X11 working-groups.

  11. An Introduction to ToxCast™

    EPA Science Inventory

    ToxCast™ is a chemical prioritization research program to develop the ability to forecast toxicity using bioactivity profiling. The point is to use results in a variety of in vitro and rapid non-mammalian in vivo assays to explore effects at different toxicity targets. The desi...

  12. Mapping the biological condition of USA rivers and streams

    EPA Science Inventory

    We predicted the probable (pr) biological condition (BC) of ~5.4 million km of stream within the conterminous USA (CONUS). National maps of prBC could provide an important tool for prioritizing monitoring and restoration of streams. The USEPA uses a spatially balanced survey desi...

  13. Desorption ElectroSpray Ionization - Orbitrap Mass Spectrometry of synthetic polymers and copolymers.

    PubMed

    Friia, Manel; Legros, Véronique; Tortajada, Jeanine; Buchmann, William

    2012-08-01

    Desorption ElectroSpray Ionization (DESI) - Orbitrap Mass Spectrometry (MS) was evaluated as a new tool for the characterization of various industrial synthetic polymers (poly(ethylene glycol), poly(propylene glycol), poly(methylmethacrylate), poly(dimethylsiloxane)) and copolymers, with masses ranging from 500 g.mol(-1) up to more than 20 000 g.mol(-1) . Satisfying results in terms of signal stability and sensitivity were obtained from hydrophobic surfaces (HTC Prosolia) with a mixture water/methanol (10/90) as spray solvent in the presence of sodium salt. Taking into account the formation of multiplied charged species by DESI-MS, a strategy based on the use of a deconvolution software followed by the automatic assignment of the ions was described allowing the rapid determination of M(n) , M(w) and PDI values. DESI-Orbitrap MS results were compared to those obtained from matrix-assisted laser desorption/ionization- time-of-flight MS and gel permeation chromatography. An application of DESI-Orbitrap MS for the detection and identification of polymers directly from cosmetics was described. Copyright © 2012 John Wiley & Sons, Ltd.

  14. Garbanzo diet lowers cholesterol in hamsters

    USDA-ARS?s Scientific Manuscript database

    Cholesterol-lowering potential of diets with 22% protein from Chickpea (Cicer arietinum, European variety of Garbanzo, Kabuli Chana), Bengal gram (Cicer arietinum, Asian variety of Garbanzo, Desi Chana, smaller in size, yellow to black color), lentils, soy protein isolate, hydrolyzed salmon protein...

  15. NATIONAL LAKE ASSESSMENT MONITORING DESIGN

    EPA Science Inventory

    The USEPA designed the National Lake Assessment in 2005-6 with field sampling being completed in 2007. The objective of the assessment is to estimate the ecological condition of lakes and reservoirs nationally. The objective of this paper is to describe the national survey desi...

  16. CHILDREN'S ENVIRONMENTAL HEALTH RESEARCH - EPA AND DHHS COLLABORATE TO ADDRESS LONG-TERM HEALTH ISSUES

    EPA Science Inventory

    Children's environmental health is important to the mission of both the U.S. Department of Health and Human Services (DHHS) and the U.S. Environmental Protection Agency (EPA). Over the past seven years, federal experts from a variety of disciplines including survey sampling desi...

  17. A New Splitting Method for Both Analytical and Preparative LC/MS

    NASA Astrophysics Data System (ADS)

    Cai, Yi; Adams, Daniel; Chen, Hao

    2013-11-01

    This paper presents a novel splitting method for liquid chromatography/mass spectrometry (LC/MS) application, which allows fast MS detection of LC-separated analytes and subsequent online analyte collection. In this approach, a PEEK capillary tube with a micro-orifice drilled on the tube side wall is used to connect with LC column. A small portion of LC eluent emerging from the orifice can be directly ionized by desorption electrospray ionization (DESI) with negligible time delay (6~10 ms) while the remaining analytes exiting the tube outlet can be collected. The DESI-MS analysis of eluted compounds shows narrow peaks and high sensitivity because of the extremely small dead volume of the orifice used for LC eluent splitting (as low as 4 nL) and the freedom to choose favorable DESI spray solvent. In addition, online derivatization using reactive DESI is possible for supercharging proteins and for enhancing their signals without introducing extra dead volume. Unlike UV detector used in traditional preparative LC experiments, this method is applicable to compounds without chromophores (e.g., saccharides) due to the use of MS detector. Furthermore, this splitting method well suits monolithic column-based ultra-fast LC separation at a high elution flow rate of 4 mL/min. [Figure not available: see fulltext.

  18. A new splitting method for both analytical and preparative LC/MS.

    PubMed

    Cai, Yi; Adams, Daniel; Chen, Hao

    2014-02-01

    This paper presents a novel splitting method for liquid chromatography/mass spectrometry (LC/MS) application, which allows fast MS detection of LC-separated analytes and subsequent online analyte collection. In this approach, a PEEK capillary tube with a micro-orifice drilled on the tube side wall is used to connect with LC column. A small portion of LC eluent emerging from the orifice can be directly ionized by desorption electrospray ionization (DESI) with negligible time delay (6~10 ms) while the remaining analytes exiting the tube outlet can be collected. The DESI-MS analysis of eluted compounds shows narrow peaks and high sensitivity because of the extremely small dead volume of the orifice used for LC eluent splitting (as low as 4 nL) and the freedom to choose favorable DESI spray solvent. In addition, online derivatization using reactive DESI is possible for supercharging proteins and for enhancing their signals without introducing extra dead volume. Unlike UV detector used in traditional preparative LC experiments, this method is applicable to compounds without chromophores (e.g., saccharides) due to the use of MS detector. Furthermore, this splitting method well suits monolithic column-based ultra-fast LC separation at a high elution flow rate of 4 mL/min. Figure ᅟ

  19. INDOOR AIR QUALITY AND INHALATION EXPOSURE - SIMULATION TOOL KIT

    EPA Science Inventory

    A Microsoft Windows-based indoor air quality (IAQ) simulation software package is presented. Named Simulation Tool Kit for Indoor Air Quality and Inhalation Exposure, or IAQX for short, this package complements and supplements existing IAQ simulation programs and is desi...

  20. Online Monitoring of Enzymatic Reactions Using Time-Resolved Desorption Electrospray Ionization Mass Spectrometry.

    PubMed

    Cheng, Si; Wu, Qiuhua; Xiao, He; Chen, Hao

    2017-02-21

    Electrospray ionization mass spectrometry (ESI-MS) is powerful for determining enzymatic reaction kinetics because of its soft ionization nature. However, it is limited to use ESI-favored solvents containing volatile buffers (e.g., ammonium acetate). In addition, lack of a quenching step for online ESI-MS reaction monitoring might introduce inaccuracy, due to the possible acceleration of reaction in the sprayed microdroplets. To overcome these issues, this study presents a new approach for online measuring enzymatic reaction kinetics using desorption electrospray ionization mass spectrometry (DESI-MS). By using DESI-MS, enzymatic reaction products in a buffered aqueous media (e.g., a solution containing Tris buffer or high concentration of inorganic salts) could be directly detected. Furthermore, by adjusting the pH and solvent composition of the DESI spray, reaction can be online quenched to avoid the postionization reaction event, leading to fast and accurate measurement of kinetic constants. Reaction time control can be obtained simply by adjusting the injection flow rates of enzyme and substrate solutions. Enzymatic reactions examined in this study include hydrolysis of 2-nitrophenyl-β-D-galactopyranoside by β-galactosidase and hydrolysis of acetylcholine by acetylcholinesterase. Derived Michaelis-Menten constants Km for these two reactions were determined to be 214 μM and 172 μM, respectively, which are in good agreement with the values of 300 μM and 230 μM reported in literature, validating the DESI-MS approach. Furthermore, this time-resolved DESI-MS also allowed us to determine Km and turnover number kcat for trypsin digestion of angiotensin II (Km and kcat are determined to be 6.4 mM and 1.3 s(-1), respectively).

  1. The Potential Use of Fermented Chickpea and Faba Bean Flour as Food Ingredients.

    PubMed

    Chandra-Hioe, Maria V; Wong, Christina H M; Arcot, Jayashree

    2016-03-01

    Apart from being a rich and inexpensive protein source, legumes provide essential vitamins, minerals and dietary fibre. Considering the nutritional benefits, legumes flour can potentially be incorporated in the development of new products. The aim of this study was to investigate whether fermentation affects the protein content, in vitro protein digestibility, trypsin inhibitor activity and the functionality of proteins in faba bean, desi and kabuli chickpea. Australian grown chickpea and faba bean were selected and initially soaked, de-hulled, dried and milled into flour. This was fermented with lyophilised yoghurt cultures in a 30 °C orbital shaker for 16 h. While protein contents in fermented desi and kabuli flour were lower than their raw counterparts (p > 0.05), it was significantly higher in fermented faba bean. A significant increase (9.5%) in in vitro protein digestibility was found in fermented desi. Trypsin inhibitor activity in fermented desi, kabuli and faba bean reduced by 2.7, 1.1 and 4.7%, respectively (p > 0.05). Overall, the in vitro protein digestibility in flour samples increased, while simultaneously reducing the trypsin inhibitor activity. The water absorption capacity of the fermented kabuli flour significantly increased by 11.3%. All fermented flour samples had significantly higher oil absorption capacity than their corresponding raw flour that was likely due to increased insoluble hydrophobic protein. Although, the foaming capacity in all fermented flour samples was significantly lower than their respective raw samples, only fermented desi and faba bean flour showed lower foaming stability (p > 0.05). The present study suggests that fermented legume flour could fulfill the demand for innovative products of higher nutritional value.

  2. Integration of Electrochemistry with Ultra Performance Liquid Chromatography/Mass Spectrometry (UPLC/MS)

    PubMed Central

    Cai, Yi; Zheng, Qiuling; Liu, Yong; Helmy, Roy; Loo, Joseph A.; Chen, Hao

    2015-01-01

    This study presents the development of ultra-performance liquid chromatography/mass spectrometry (UPLC/MS) combined with electrochemistry (EC) for the first time and its application for the structural analysis of disulfide bond-containing proteins/peptides. In our approach, a protein/peptide mixture sample undergoes fast UPLC separation and subsequent electrochemical reduction in an electrochemical flow cell followed by online MS and MS/MS analyses. The electrochemical cell is coupled to MS using our recently developed desorption electrospray ionization (DESI) interface. Using this UPLC/EC/DESI-MS method, disulfide bond-containing peptides can be differentiated from those without disulfide bonds as the former are electroactive and reducible. Tandem MS analysis of the disulfide-reduced peptide ions provides increased sequence and disulfide linkage pattern information. In a reactive DESI-MS detection experiment in which a supercharging reagent was used to dope the DESI spray solvent, increased charging was obtained for the UPLC-separated proteins. Strikingly, upon online electrolytic reduction, supercharged proteins (e.g., α-lactalbumin) showed even higher charging, which would be useful in top-down protein structure analysis as increased charges are known to promote protein ion dissociation. Also, the separation speed and sensitivity are enhanced by approximately 1~2 orders of magnitude by using UPLC for the LC/EC/MS platform, in comparison to the previously used high performance liquid chromatography (HPLC). This UPLC/EC/DESI-MS method combines the power of fast UPLC separation, fast electrochemical conversion and online MS structural analysis for a potentially valuable tool for proteomics research and bioanalysis. PMID:26307715

  3. Direct analysis of Salvia divinorum leaves for salvinorin A by thin layer chromatography and desorption electrospray ionization multi-stage tandem mass spectrometry.

    PubMed

    Kennedy, Joseph H; Wiseman, Justin M

    2010-05-15

    Salvia divinorum is widely cultivated in the US, Mexico, Central and South America and Europe and is consumed for its ability to produce hallucinogenic effects similar to those of other scheduled hallucinogenic drugs, such as LSD. Salvinorin A (SA), a kappa opiod receptor agonist and psychoactive constituent, is found primarily in the leaves and to a lesser extent in the stems of the plant. Herein, the analysis of intact S. divinorum leaves for SA and of acetone extracts separated using thin layer chromatography (TLC) is demonstrated using desorption electrospray ionization (DESI) mass spectrometry. The detection of SA using DESI in the positive ion mode is characterized by several ions associated with the compound - [M+H](+), [M+NH(4)](+), [M+Na](+), [2M+NH(4)](+), and [2M+Na](+). Confirmation of the identity of these ions is provided through exact mass measurements using a time-of-flight (ToF) mass spectrometer. The presence of SA in the leaves was confirmed by multi-stage tandem mass spectrometry (MS(n)) of the [M+H](+) ion using a linear ion trap mass spectrometer. Direct analysis of the leaves revealed several species of salvinorin in addition to SA as confirmed by MS(n), including salvinorin B, C, D/E, and divinatorin B. Further, the results from DESI imaging of a TLC separation of a commercial leaf extract and an acetone extract of S. divinorum leaves were in concordance with the TLC/DESI-MS results of an authentic salvinorin A standard. The present study provides an example of both the direct analysis of intact plant materials for screening illicit substances and the coupling of TLC and DESI-MS as a simple method for the examination of natural products.

  4. Desorption electrospray ionization mass spectrometry: Imaging drugs and metabolites in tissues

    PubMed Central

    Wiseman, Justin M.; Ifa, Demian R.; Zhu, Yongxin; Kissinger, Candice B.; Manicke, Nicholas E.; Kissinger, Peter T.; Cooks, R. Graham

    2008-01-01

    Ambient ionization methods for MS enable direct, high-throughput measurements of samples in the open air. Here, we report on one such method, desorption electrospray ionization (DESI), which is coupled to a linear ion trap mass spectrometer and used to record the spatial intensity distribution of a drug directly from histological sections of brain, lung, kidney, and testis without prior chemical treatment. DESI imaging provided identification and distribution of clozapine after an oral dose of 50 mg/kg by: i) measuring the abundance of the intact ion at m/z 327.1, and ii) monitoring the dissociation of the protonated drug compound at m/z 327.1 to its dominant product ion at m/z 270.1. In lung tissues, DESI imaging was performed in the full-scan mode over an m/z range of 200-1100, providing an opportunity for relative quantitation by using an endogenous lipid to normalize the signal response of clozapine. The presence of clozapine was detected in all tissue types, whereas the presence of the N-desmethyl metabolite was detected only in the lung sections. Quantitation of clozapine from the brain, lung, kidney, and testis, by using LC-MS/MS, revealed concentrations ranging from 0.05 μg/g (brain) to a high of 10.6 μg/g (lung). Comparisons of the results recorded by DESI with those by LC-MS/MS show good agreement and are favorable for the use of DESI imaging in drug and metabolite detection directly from biological tissues. PMID:18697929

  5. Spatially resolved metabolic phenotyping of breast cancer by desorption electrospray ionization mass spectrometry.

    PubMed

    Guenther, Sabine; Muirhead, Laura J; Speller, Abigail V M; Golf, Ottmar; Strittmatter, Nicole; Ramakrishnan, Rathi; Goldin, Robert D; Jones, Emrys; Veselkov, Kirill; Nicholson, Jeremy; Darzi, Ara; Takats, Zoltan

    2015-05-01

    Breast cancer is a heterogeneous disease characterized by varying responses to therapeutic agents and significant differences in long-term survival. Thus, there remains an unmet need for early diagnostic and prognostic tools and improved histologic characterization for more accurate disease stratification and personalized therapeutic intervention. This study evaluated a comprehensive metabolic phenotyping method in breast cancer tissue that uses desorption electrospray ionization mass spectrometry imaging (DESI MSI), both as a novel diagnostic tool and as a method to further characterize metabolic changes in breast cancer tissue and the tumor microenvironment. In this prospective single-center study, 126 intraoperative tissue biopsies from tumor and tumor bed from 50 patients undergoing surgical resections were subject to DESI MSI. Global DESI MSI models were able to distinguish adipose, stromal, and glandular tissue based on their metabolomic fingerprint. Tumor tissue and tumor-associated stroma showed evident changes in their fatty acid and phospholipid composition compared with normal glandular and stromal tissue. Diagnosis of breast cancer was achieved with an accuracy of 98.2% based on DESI MSI data (PPV 0.96, NVP 1, specificity 0.96, sensitivity 1). In the tumor group, correlation between metabolomic profile and tumor grade/hormone receptor status was found. Overall classification accuracy was 87.7% (PPV 0.92, NPV 0.9, specificity 0.9, sensitivity 0.92). These results demonstrate that DESI MSI may be a valuable tool in the improved diagnosis of breast cancer in the future. The identified tumor-associated metabolic changes support theories of de novo lipogenesis in tumor tissue and the role of stroma tissue in tumor growth and development and overall disease prognosis.

  6. The quantitative surface analysis of an antioxidant additive in a lubricant oil matrix by desorption electrospray ionization mass spectrometry.

    PubMed

    Da Costa, Caitlyn; Reynolds, James C; Whitmarsh, Samuel; Lynch, Tom; Creaser, Colin S

    2013-11-15

    Chemical additives are incorporated into commercial lubricant oils to modify the physical and chemical properties of the lubricant. The quantitative analysis of additives in oil-based lubricants deposited on a surface without extraction of the sample from the surface presents a challenge. The potential of desorption electrospray ionization mass spectrometry (DESI-MS) for the quantitative surface analysis of an oil additive in a complex oil lubricant matrix without sample extraction has been evaluated. The quantitative surface analysis of the antioxidant additive octyl (4-hydroxy-3,5-di-tert-butylphenyl)propionate in an oil lubricant matrix was carried out by DESI-MS in the presence of 2-(pentyloxy)ethyl 3-(3,5-di-tert-butyl-4-hydroxyphenyl)propionate as an internal standard. A quadrupole/time-of-flight mass spectrometer fitted with an in-house modified ion source enabling non-proximal DESI-MS was used for the analyses. An eight-point calibration curve ranging from 1 to 80 µg/spot of octyl (4-hydroxy-3,5-di-tert-butylphenyl)propionate in an oil lubricant matrix and in the presence of the internal standard was used to determine the quantitative response of the DESI-MS method. The sensitivity and repeatability of the technique were assessed by conducting replicate analyses at each concentration. The limit of detection was determined to be 11 ng/mm(2) additive on spot with relative standard deviations in the range 3-14%. The application of DESI-MS to the direct, quantitative surface analysis of a commercial lubricant additive in a native oil lubricant matrix is demonstrated. © 2013 The Authors. Rapid Communications in Mass Spectrometry published by John Wiley & Sons, Ltd.

  7. The quantitative surface analysis of an antioxidant additive in a lubricant oil matrix by desorption electrospray ionization mass spectrometry

    PubMed Central

    Da Costa, Caitlyn; Reynolds, James C; Whitmarsh, Samuel; Lynch, Tom; Creaser, Colin S

    2013-01-01

    RATIONALE Chemical additives are incorporated into commercial lubricant oils to modify the physical and chemical properties of the lubricant. The quantitative analysis of additives in oil-based lubricants deposited on a surface without extraction of the sample from the surface presents a challenge. The potential of desorption electrospray ionization mass spectrometry (DESI-MS) for the quantitative surface analysis of an oil additive in a complex oil lubricant matrix without sample extraction has been evaluated. METHODS The quantitative surface analysis of the antioxidant additive octyl (4-hydroxy-3,5-di-tert-butylphenyl)propionate in an oil lubricant matrix was carried out by DESI-MS in the presence of 2-(pentyloxy)ethyl 3-(3,5-di-tert-butyl-4-hydroxyphenyl)propionate as an internal standard. A quadrupole/time-of-flight mass spectrometer fitted with an in-house modified ion source enabling non-proximal DESI-MS was used for the analyses. RESULTS An eight-point calibration curve ranging from 1 to 80 µg/spot of octyl (4-hydroxy-3,5-di-tert-butylphenyl)propionate in an oil lubricant matrix and in the presence of the internal standard was used to determine the quantitative response of the DESI-MS method. The sensitivity and repeatability of the technique were assessed by conducting replicate analyses at each concentration. The limit of detection was determined to be 11 ng/mm2 additive on spot with relative standard deviations in the range 3–14%. CONCLUSIONS The application of DESI-MS to the direct, quantitative surface analysis of a commercial lubricant additive in a native oil lubricant matrix is demonstrated. © 2013 The Authors. Rapid Communications in Mass Spectrometry published by John Wiley & Sons, Ltd. PMID:24097398

  8. Inheritance of natural seed-coat cracking in chickpea.

    PubMed

    Gaur, Pooran M; Srinivasan, Samineni; Suresh, Kamatam; Deepika, Sarikonda R; Rao, Boyapati V

    2012-01-01

    A spontaneous mutant with natural seed-coat cracking, designated "cracked seed-coat mutant (CSM)," was identified in chickpea (Cicer arietinum L.) from an F(2) population of a cross ICRISAT chickpea (ICC) 10301 × ICC 12430. The extent of seed-coat cracking (SCC) varied widely from a minute to several wide cracks. Seed coats showed cracks before seeds were fully developed and the plants had reached physiological maturity. However, seed-coat cracks were most visible on dry matured seeds, particularly in desi types. Two loci (Scc-1 and Scc-2) that controlled SCC were identified. F(1) plants from the crosses of CSM with desi genotypes produced seeds with no SCC, whereas F(1) plants from the crosses of CSM with kabuli genotypes produced seeds with SCC. F(2) segregation followed 13:3 and 7:9 ratios for plants without SCC and with SCC in CSM × Desi and CSM × Kabuli crosses, respectively. Three alleles were identified at the first locus (Scc-1) from CSM (Scc-1 (c)), desi (Scc-1 (d)), and kabuli (Scc-1 (k)) types, with the dominance relationship being Scc-1 (d) > Scc-1 (c) > Scc-1 ( k ). At the second locus (Scc-2), CSM had the dominant allele (Scc-2), whereas both desi and kabuli types had the recessive allele (scc-2). The SCC trait showed no linkage with leaf type (pinnate vs. simple) and flower color (pink vs. white) and had no adverse effects on grain yield. The SCC trait may facilitate dehulling and preparation of splits (dal), but the cracked seed would be prone to damage by insect pests and unfavorable moisture conditions.

  9. Integration of electrochemistry with ultra-performance liquid chromatography/mass spectrometry.

    PubMed

    Cai, Yi; Zheng, Qiuling; Liu, Yong; Helmy, Roy; Loo, Joseph A; Chen, Hao

    2015-01-01

    This study presents the development of ultra-performance liquid chromatography (UPLC) mass spectrometry (MS) combined with electrochemistry (EC) for the first time and its application for the structural analysis of proteins/peptides that contain disulfide bonds. In our approach, a protein/peptide mixture sample undergoes a fast UPLC separation and subsequent electrochemical reduction in an electrochemical flow cell followed by online MS and tandem mass spectrometry (MS/MS) analyses. The electrochemical cell is coupled to the mass spectrometer using our recently developed desorption electrospray ionization (DESI) interface. Using this UPLC/EC/DESI-MS method, peptides that contain disulfide bonds can be differentiated from those without disulfide bonds, as the former are electroactive and reducible. MS/MS analysis of the disulfide-reduced peptide ions provides increased information on the sequence and disulfide-linkage pattern. In a reactive DESI- MS detection experiment in which a supercharging reagent was used to dope the DESI spray solvent, increased charging was obtained for the UPLC-separated proteins. Strikingly, upon online electrolytic reduction, supercharged proteins (e.g., α-lactalbumin) showed even higher charging, which will be useful in top- down protein structure MS analysis as increased charges are known to promote protein ion dissociation. Also, the separation speed and sensitivity are enhanced by approximately 1(~)2 orders of magnitude by using UPLC for the liquid chromatography (LC)/EC/MS platform, in comparison to the previously used high- performance liquid chromatography (HPLC). This UPLC/EC/DESI-MS method combines the power of fast UPLC separation, fast electrochemical conversion, and online MS structural analysis for a potentially valuable tool for proteomics research and bioanalysis.

  10. Characterization of Ce SUP 3+-tributyl phosphate coordination complexes produced by fused droplet electrospray ionization with a target capillary

    SciTech Connect

    Gary S. Groenewold; Jean-Jacques Gaumet

    2011-12-01

    Coordination complexes containing Ce(III) and tri-n-butyl phosphate (TBP) in the 1+, 2+ and 3+ charge states were generated using desorption electrospray ionization (DESI) mass spectrometry, in which the analyte solutions were supplied via a target capillary orthogonally situated with respect to the electrospray. Comparison with direct electrospray (ESI) showed that the same coordination complexes were produced in each experiment, and could be described by the general formula [Ce(NO3)m=0-2(TBP)n](3-m)+. This result indicates that DESI has utility for measuring metal speciation for metal ligand solutions where the gas-phase complexes generated by ESI have been correlated with solution speciation. Such an application would be useful for analyses where it is desirable to limit the total amount of metal being handled, or that have solvent systems that are not readily amenable to ESI. Both the direct ESI and DESI mass spectra showed similar trends with respect to the TBP:Ce ratio, viz. high values tend to favor formation of a larger fraction of the 1+ species, and the 2+ and 3+ species become relatively more important as the ratio is decreased. Within individual charge state ion envelopes, lower TBP:Ce ratios produce coordination complexes with fewer ligands, a trend also seen using both approaches. These trends again point toward strong similarity between the direct ESI and DESI analyses of the metal-ligand solutions. The DESI experiments were less sensitive for measuring the coordination complexes compared to the direct ESI experiments, by a factor of 10 - 100 depending on whether minimum detectable concentration or absolute ion abundances were considered. Nevertheless, mid-picomolar quantities of coordination complexes were measured using the target capillary, indicating that sensitivity would be sufficient for measuring species in many industrial separations processes.

  11. QUENCH STUDIES AND PREHEATING ANALYSIS OF SEAMLESS

    SciTech Connect

    Palczewski, Ari; Geng, Rongli; Eremeev, Grigory

    2013-09-01

    One of the alternative manufacturing technologies for SRF cavities is hydroforming from seamless tubes. Although this technology has produced cavities with gradient and Q-values comparable to standard EBW/EP cavities, a few questions remain. One of these questions is whether the quench mechanism in hydroformed cavities is the same as in standard electron beam welded cavities. Towards this effort Jefferson Lab performed quench studies on 2 9 cell seamless hydroformed cavities. These cavities include DESY's - Z163 and Z164 nine-cell cavities hydroformed at DESY. Initial Rf test results Z163 were published in SRF2011. In this report we will present post JLAB surface re-treatment quench studies for each cavity. The data will include OST and T-mapping quench localization as well as quench location preheating analysis comparing them to the observations in standard electron beam welded cavities.

  12. Extraction and characterization of chickpea (Cicer arietinum) albumin and globulin.

    PubMed

    Liu, L H; Hung, T V; Bennett, L

    2008-06-01

    Albumin and globulin fractions of 1 Desi and 2 Kabuli varieties of chickpeas (Cicer arietinum) were extracted with water and salt solutions (K(2)SO(4) and NaCl). The extractable yields and particularly the albumin-globulin ratio varied greatly with the extraction medium and chickpea variety. Depending on the procedure employed, albumin could be extracted as a major fraction of chickpea proteins. Higher levels of essential amino acids and sulfur containing amino acids were found in albumins than in globulins of all chickpeas investigated. The common structural characteristics of both Kabuli and Desi chickpea albumins and globulins were clearly identified by densitometric profiles of their sodium dodecyl sulfate polyacrylamide gel patterns. Albumins contained subunits with higher molecular weights than those of globulins. The in vitro digestibility of the chickpea proteins by papain, pepsin, chymotrypsin, and trypsin indicated that globulins were more susceptible to proteolytic hydrolysis.

  13. Higher Order Modes in Third Harmonic Cavities for XFEL/FLASH

    SciTech Connect

    Shinton, I.R.R.; Baboi, N.; Eddy, N.; Flisgen, T.; Glock, H.W.; Jones, R.M.; Juntong, N.; Khabiboulline, T.N.; van Rienen, U; Zhang, P.; /Manchester U. /DESY /Cockcroft Inst. Accel. Sci. Tech.

    2010-06-01

    We analyse higher order modes in the 3.9 GHz bunch shaping cavities recently installed in the FLASH facility at DESY. We report on recent experimental results on the frequency spectrum from probe based measurements made at CMTB at DESY. These are compared to those predicted by finite difference and finite element computer codes. This study is focused mainly on the dipole component of the multi-pole expansion of the wakefield. The modes are readily identifiable as single-cavity modes provided the frequencies of these modes are below the cut-off of the inter-connecting beam pipes. The modes above cut-off are coupled to the 4 cavities and are distinct from single cavity modes.

  14. Mechanical stability study of type IV cryomodule (ILC prototype)

    SciTech Connect

    McGee, M.W.; Doremus, R.; Wands, C.R.; /Fermilab

    2007-06-01

    An ANSYS modal and harmonic finite element analysis (FEA) was performed in order to investigate cryomodule design mechanical stability for the proposed International Linear Collider (ILC). The current cryomodule, designated Type IV or (T4CM), closely follows the Type III TESLA Test Facility (TTF) version used at DESY, with the exception of a proposed location of the superconducting (SC) quadrupole at the center. This analysis considered the stringent stability criteria established for the ILC, where vertical motion for the SC quadrupole is limited to the micron range at a few Hz. Model validation was achieved through Type III cryomodule vibration measurement studies performed at DESY. The effect of support location, support stiffness and other important parameters were considered in a parametric sensitivity study. FEA results, fast motion investigations and stabilization techniques are discussed.

  15. A Phase Space Tomography Diagnostic for Pitz

    SciTech Connect

    D.J. Holder; B.D. Muratori; F.E. Hannon; S. Khodyachykh; A. Oppelt

    2006-06-26

    The Photo Injector Test Facility at DESY in Zeuthen (PITZ) is a European collaboration developing RF photocathode electron guns for light source and linear collider projects. As part of the collaborative work being partially funded by the EU's FP6 programme, CCLRC Daresbury Laboratory and DESY are designing and building a phase space tomography diagnostic based on a set of multiple quadrupoles and view screens. In order to measure the beam emittance, four screens with intermediate quadrupole doublets will be used. The equipment will be installed and tested at PITZ as part of the facility upgrade presently ongoing. Following simulations of the gun using the ASTRA code at a range of energies, simulations of the electron beam parameters through the matching and tomography sections must be undertaken in order to specify the optimum arrangement of magnets and screens.

  16. Advances in Large Grain Resonators for the European XFEL

    NASA Astrophysics Data System (ADS)

    Singer, W.; Aderhold, S.; Iversen, J.; Kreps, G.; Matheisen, A.; Singer, X.; Twarowski, K.; Weise, H.; Pekeler, M.; Scholz, F.; Spaniol, B.; Stiedl, E.

    2011-03-01

    An overview of the activities within the DESY test program of 1.3 GHz TESLA shape 9-cell Large Grain (LG) resonators for the European XFEL, which have taken place in last 4 years, is presented. Attention is devoted to development of LG disc production and cavity fabrication from this material, focusing in particular on aspects of production at reasonable accuracy and costs. More than 200 LG discs were manufactured, eleven 9-cell resonators produced, partially treated at the company Research Instruments (RI) (former ACCEL) and finally treated and RF tested at DESY. Two of the LG cavities are currently used in the FLASH accelerator operation, which is the best demonstration of the feasibility of the LG application. The program compares large grain material with standard sheet niobium. Some data and perspectives of the LG application are discussed.

  17. NR activity in the accelerating cavities development and study for ILC positron source parameters

    NASA Astrophysics Data System (ADS)

    Paramonov, V. V.; Kravchuk, L. V.; Moiseev, V. A.; Naboka, A. N.; Skasyrskaya, A. K.

    2008-12-01

    The critical part of the normal conducting (NC) positron preaccelerator (PPA) at the ILC positron source (PS) are capture sections that should operate with an accelerating gradient of up to 15 MV/m in combination with long RF pulse (˜1 ms). Developed at the Institute of Nuclear Research (INR) and now being constructed at DESY, the CDS booster cavity for the Photo Injector Test facility, DESY, Zeuthen, will operate under the same conditions and is a full-scale, high-RF-power prototype of the PS capture cavities. Cavity construction status and results of cavity tuning at a low RF level are presented. Other features of the standing wave cavities for the PPA, such as RF pulsed heating, advanced cooling, and beam loading, are discussed.

  18. Exploring dark matter microphysics with galaxy surveys

    SciTech Connect

    Escudero, Miguel; Mena, Olga; Vincent, Aaron C.; Wilkinson, Ryan J.; Boehm, Céline E-mail: omena@ific.uv.es E-mail: ryan.wilkinson@durham.ac.uk

    2015-09-01

    We use present cosmological observations and forecasts of future experiments to illustrate the power of large-scale structure (LSS) surveys in probing dark matter (DM) microphysics and unveiling potential deviations from the standard ΛCDM scenario. To quantify this statement, we focus on an extension of ΛCDM with DM-neutrino scattering, which leaves a distinctive imprint on the angular and matter power spectra. After finding that future CMB experiments (such as COrE+) will not significantly improve the constraints set by the Planck satellite, we show that the next generation of galaxy clustering surveys (such as DESI) could play a leading role in constraining alternative cosmologies and even have the potential to make a discovery. Typically we find that DESI would be an order of magnitude more sensitive to DM interactions than Planck, thus probing effects that until now have only been accessible via N-body simulations.

  19. A 1.8 K test facility for superconducting RF cavities

    SciTech Connect

    Horlitz, G.; Knopf, U.; Lange, R.; Petersen, B.; Sellmann, D.; Trines, D.; Peterson, T.

    1994-04-01

    To demonstrate the feasibility of superconducting RF technology for a high energy e{sup +}/e{sup {minus}} collider, a research and development program has begun with collaborators from Europe, Asia, and North America. The immediate goal of the R&D program is to build and operate a 50 meter-long linac at DESY with 1.3 GHz superconducting RF cavities at a temperature of 1.8 K - 2.0 K and an accelerating gradient of 15 MV/meter. The refrigeration for the test system at DESY initially will have a capacity of about 100 W at 1.8 K, distributed among three test cryostats. In a second step, refrigeration will be upgraded to 200 W at 1.8 K in order to supply the 50 meter test linac. This paper describes the cryogenics of this test system.

  20. Ethylene glycol contamination effects on first surface aluminized mirrors

    NASA Astrophysics Data System (ADS)

    Dunlop, Patrick; Probst, Ronald G.; Evatt, Matthew; Reddell, Larry; Sprayberry, David

    2016-07-01

    The Dark Energy Spectroscopic Instrument (DESI) is under construction for installation on the Mayall 4 Meter telescope. The use of a liquid cooling system is proposed to maintain the DESI prime focus assembly temperature within ±1°C of ambient. Due to concerns of fluid deposition onto optical surfaces from possible leaks, systematic tests were performed of the effects on first surface aluminized mirrors of ethylene glycol and two other candidate coolants. Objective measurement of scattering and reflectivity was an important supplement to visual inspection. Rapid cleanup of a coolant spill followed by a hand wash of the mirror limited surface degradation to the equivalent of a few months of general environmental exposure. Prolonged exposure to corrosive coolants dissolved the aluminum, necesitating mirror recoating.

  1. Effects of gamma irradiation on the shoot length of Cicer seeds [rapid communication

    NASA Astrophysics Data System (ADS)

    Toker, Cengiz; Uzun, Bulent; Canci, Huseyin; Oncu Ceylan, F.

    2005-08-01

    The effects of radiation on the shoot and root lengths of germinated seedling of irradiated seeds of Cicer species, i.e. three kabuli types and four desi types of cultivated chickpea ( Cicer arietinum Ladiz.) and 2 annual wild types ( C. reticulatum Ladiz. and C. bijugum K.H. Rech.) were investigated. The seeds were irradiated with a 60Co gamma source using 0, 200, 300 and 400 Gy doses at 1.66 kGy h -1. At 200 Gy minor effects could be observed, but at 400 Gy an obvious depression of shoot length was observed. The kabuli types were more affected than the desi ones. The critical dose that prevented the shoot and root elongation varied among species and also ranged from genotypes to genotype within species.

  2. 3.9 GHz superconducting accelerating 9-cell cavity vertical test results

    SciTech Connect

    Khabiboulline, Timergali; Cooper, Charles; Dhanaraj, Nandhini; Edwards, Helen; Foley, Mike; Harms, Elvin; Mitchell, Donald; Rowe, Allan; Solyak, Nikolay; Moeller, Wolf-Dietrich; /DESY

    2007-06-01

    The 3rd harmonic 3.9GHz accelerating cavity was proposed to improve the beam performance of the FLASH (TTF/DESY) facility [1]. In the frame of a collaborative agreement, Fermilab will provide DESY with a cryomodule containing a string of four cavities. In addition, a second cryomodule with one cavity will be fabricated for installation in the Fermilab photo-injector, which will be upgraded for the ILC accelerator test facility. The first 9-cell Nb cavities were tested in a vertical setup and they didn't reach the designed accelerating gradient [2]. The main problem was a multipactor in the HOM couplers, which lead to overheating and quenching of the HOM couplers. New HOM couplers with improved design are integrated in the next 9-cell cavities. In this paper we present all results of the vertical tests.

  3. Performance tests of an AGIPD 0.4 assembly at the beamline P10 of PETRA III

    NASA Astrophysics Data System (ADS)

    Becker, J.; Marras, A.; Klyuev, A.; Westermeier, F.; Trunk, U.; Graafsma, H.

    2013-06-01

    The Adaptive Gain Integrating Pixel Detector (AGIPD) is a novel detector system, currently under development by a collaboration of DESY, the Paul Scherrer Institute in Switzerland, the University of Hamburg and the University of Bonn, and is primarily designed for use at the European XFEL. To verify key features of this detector, an AGIPD 0.4 test chip assembly was tested at the P10 beamline of the PETRA III synchrotron at DESY. The test chip successfully imaged both the direct synchrotron beam and single 7.05 keV photons at the same time, demonstrating the large dynamic range required for XFEL experiments. X-ray scattering measurements from a test sample agree with standard measurements and show the chip's capability of observing dynamics at the microsecond time scale.

  4. Project Overview of the Beijing-Arizona Sky Survey

    NASA Astrophysics Data System (ADS)

    Zou, Hu; Zhou, Xu; Fan, Xiaohui; Zhang, Tianmeng; Zhou, Zhimin; Nie, Jundan; Peng, Xiyan; McGreer, Ian; Jiang, Linhua; Dey, Arjun; Fan, Dongwei; He, Boliang; Jiang, Zhaoji; Lang, Dustin; Lesser, Michael; Ma, Jun; Mao, Shude; Schlegel, David; Wang, Jiali

    2017-06-01

    The Beijing-Arizona Sky Survey (BASS) is a wide-field two-band photometric survey of the northern Galactic Cap using the 90Prime imager on the 2.3 m Bok telescope at Kitt Peak. It is a four-year collaboration between the National Astronomical Observatory of China and Steward Observatory, the University of Arizona, serving as one of the three imaging surveys to provide photometric input catalogs for target selection of the Dark Energy Spectroscopic Instrument (DESI) project. BASS will take up to 240 dark/gray nights to cover an area of about 5400 deg2 in the g and r bands. The 5σ limiting AB magnitudes for point sources in the two bands, corrected for the Galactic extinction, are 24.0 and 23.4 mag, respectively. BASS, together with other DESI imaging surveys, will provide unique science opportunities that cover a wide range of topics in both Galactic and extragalactic astronomy.

  5. FPGA-based Klystron linearization implementations in scope of ILC

    SciTech Connect

    Omet, M.; Michizono, S.; Varghese, P.; Schlarb, H.; Branlard, J.; Cichalewski, W.

    2015-01-23

    We report the development and implementation of four FPGA-based predistortion-type klystron linearization algorithms. Klystron linearization is essential for the realization of ILC, since it is required to operate the klystrons 7% in power below their saturation. The work presented was performed in international collaborations at the Fermi National Accelerator Laboratory (FNAL), USA and the Deutsches Elektronen Synchrotron (DESY), Germany. With the newly developed algorithms, the generation of correction factors on the FPGA was improved compared to past algorithms, avoiding quantization and decreasing memory requirements. At FNAL, three algorithms were tested at the Advanced Superconducting Test Accelerator (ASTA), demonstrating a successful implementation for one algorithm and a proof of principle for two algorithms. Furthermore, the functionality of the algorithm implemented at DESY was demonstrated successfully in a simulation.

  6. FPGA-based Klystron linearization implementations in scope of ILC

    DOE PAGES

    Omet, M.; Michizono, S.; Matsumoto, T.; ...

    2015-01-23

    We report the development and implementation of four FPGA-based predistortion-type klystron linearization algorithms. Klystron linearization is essential for the realization of ILC, since it is required to operate the klystrons 7% in power below their saturation. The work presented was performed in international collaborations at the Fermi National Accelerator Laboratory (FNAL), USA and the Deutsches Elektronen Synchrotron (DESY), Germany. With the newly developed algorithms, the generation of correction factors on the FPGA was improved compared to past algorithms, avoiding quantization and decreasing memory requirements. At FNAL, three algorithms were tested at the Advanced Superconducting Test Accelerator (ASTA), demonstrating a successfulmore » implementation for one algorithm and a proof of principle for two algorithms. Furthermore, the functionality of the algorithm implemented at DESY was demonstrated successfully in a simulation.« less

  7. An innovative method based on quick, easy, cheap, effective, rugged, and safe extraction coupled to desorption electrospray ionization-high resolution mass spectrometry for screening the presence of paralytic shellfish toxins in clams.

    PubMed

    Mattarozzi, Monica; Bianchi, Federica; Milioli, Marco; Cavazza, Antonella; Careri, Maria

    2016-01-15

    The capabilities of desorption electrospray ionization-high resolution mass spectrometry (DESI-HRMS) were tested for screening the presence of some paralytic shellfish toxins in clams. A quick, easy, cheap, effective, rugged, and safe (QuEChERS) approach is proposed for sample clean-up. QuEChERS extraction was optimized by using a full factorial design followed by the multicriteria method of the desirability functions. Quantitation limits in the microgram per kilogram range proved reliability of the method for the detection of the investigated toxins in accordance to the rules laid down by European legislation. The optimized QuEChERS-DESI-HRMS based-method allowed for a rapid reliable screening of the investigated compounds at levels of interest, thus being useful for high-throughput analyses.

  8. Zur ethischen Dimension von Renaturierungsökologie und Ökosystemrenaturierung

    NASA Astrophysics Data System (ADS)

    Ott, Konrad

    Die wissenschaftlich angeleitete Ökosystemrena-turierung kann mittlerweile als eine etablierte Praxis im Bereich des Naturschutzes gelten. Diese Praxis bezieht sich notwendigerweise auf Ziele und Werte und weist damit auch eine naturethische Dimension auf. Daher hat diese Praxis die Aufmerksamkeit auch von Sozialwissenschaftlern und Ethikern auf sich gezogen. Dieses Kapitel geht der Frage nach, wie sich die naturethische Dimension der Ökosystemrenaturierung analysieren und inhaltlich bestimmen lässt. Hierzu erweist sich auch die Auseinandersetzung mit Philosophen als hilfreich, die der Ökosystemrenaturierung ein technizistisches Naturverständnis vorgeworfen haben. Am Ende des Kapitels wird ein in sich gestuftes mögliches naturethisches Selbstverständnis der Ökosystemrenaturierung diskutiert, das den an dieser Praxis Beteiligten Freiheitsgrade der Positionierung belässt.

  9. Grundlagen der Organisationsgestaltung

    NASA Astrophysics Data System (ADS)

    Spath, Dieter; Koch, Steffen

    In diesem Kapitel werden Grundlagen der Organisationsgestaltung dargestellt. Es scheint nahe liegend, diese Inhalte wie in einem Lehrbuch aufzubereiten. Schließlich handelt es sich um grundlegende Inhalte. Die Neufassung dieses Abschnitts ist aber stärker für Verantwortliche in Unternehmen geschrieben und weniger wissenschaftlich geprägt. Das "Lehrbuchwissen“ wird daher bewusst knapp gehalten. Das betrifft z.B. die Klärung des Organisationsbegriffes und die Fragen nach den Zielsetzungen und den Gestaltungsbereichen von Organisation. Stattdessen widmet sich das Kapitel ausführlicher den Fragen, ob es Trends in der Organisationsgestaltung gibt, welche wichtigen Einflussgrößen existieren und welche übergeordneten und beständigen Leitlinien es gibt.

  10. elecTUM: Umsetzung der eLearning-Strategie der Technischen Universität München

    NASA Astrophysics Data System (ADS)

    Rathmayer, Sabine; Gergintchev, Ivan

    An der TUM wurde ein umfassendes und integriertes eLearning-Konzept umgesetzt, welches Präsenzstudium und eLearning in allen Leistungsbereichen der Universität miteinander verzahnt. Ein besonderer Schwerpunkt lag dabei in der Schaffung einer effizienten und wettbewerbsfähigen integrierten eLearning Infrastruktur in Hinblick auf die noch weiter steigenden Studienanfängerzahlen ab dem Jahr 2011 sowie die Umsetzung von eBologna. Die Etablierung einer hochschulweiten Lernplattform stellte eine wesentliche Basis für die Umsetzung der eLearning-Strategie dar. Die wissenschaftliche und wirtschaftliche Anschlussfähigkeit im Hinblick auf eine Verwertung der Projektergebnisse wurde durch die aktive Beteiligung an einer Vielzahl hochschulübergreifender Arbeitskreise, Fachtagungen und Kooperationen, vor allem über Organisations- und Dienstleistungsmodelle sowie innovative technische Entwicklungen, sichergestellt.

  11. [A failed experiment - Carl Friedrich von Weizsäcker, Jürgen Habermas and the Max-Planck Society].

    PubMed

    Leendertz, Ariane

    2014-01-01

    From 1970 to 1980 Carl Friedrich von Weizsäcker headed the Max-Planck-lnstitut zur Erforschung der Lebensbedingungen der wissenschaftlich-technischen Welt (MPI for the study of the living conditions of the world of science and technology) in Starnberg, jointly with Jürgen Habermas since 1971. From the start, the Max Planck Society regarded the new institute as an experiment that might perhaps be aborted a few years later. This is exactly what happened. With the retirement of Weizsäcker, his section was closed and the whole institute was renamed. In 1981. Habermas resigned, and then the institute was closed. This paper focusses on some of the problem constellations within the institute that partly explain its development and eventual closure: its birth out of the idea of scientific policy advice, the debates within the Max Planck Society and the complex relationship between Weizsäcker and Jürgen Habermas.

  12. Neuausrichtung und Konsolidierung

    NASA Astrophysics Data System (ADS)

    Grohmann, Heinz

    Mit der Wahl von Wolfgang Wetzel zum Vorsitzenden der Deutschen Statistischen Gesellschaft im Jahre 1972 begann eine 32jährige Ära, in der die praktische und die theoretische Statistik in einem ausgewogenen Verhältnis gepflegt wurden. Ein regelmäßiger vierjähriger Wechsel im Vorsitz stärkte die Gemeinschaft und die praktische wie die wissenschaftliche Arbeit gleichermaßen. Die jährlichen Hauptversammlungen behandelten gesellschaftlich aktuelle wie zukunftsorientierte Themen, und die Ausschüsse sowie weitere Veranstaltungen gaben Gelegenheit zur Förderung und Pflege einer Vielzahl von Arbeitsgebieten der Statistik. Darüber wird nicht nur in diesem Kapitel, sondern auch in den Teilen II und III des Bandes berichtet.

  13. Räumliches Hören

    NASA Astrophysics Data System (ADS)

    Blauert, Jens; Braasch, Jonas

    Unsere Hörereignisse (Hörobjekte, Laute) existieren jeweils zu ihrer Zeit an ihrem Ort und sind mit jeweils spezifischen Eigenschaften ausgerüstet. "Räumliches Hören“ als wissenschaftliches Fachgebiet erforscht und beschreibt die Beziehungen zwischen den Orten sowie den räumlichen Ausdehnungen der Hörereignisse untereinander und zu den korrelierten Merkmalen anderer Ereignisse - vorwiegend Schallereignisse, aber z. B. auch physiologische Vorgänge, Ereignisse anderer Sinnesgebiete usw. (s. hierzu Blauert 1974 etc., woraus einige der folgenden Bilder entnommen sind). Übersichtsdarstellungen findet man z. B. auch bei (Bloch 1893, Pierce 1901, von Hornbostel 1926, Trimble 1928, Kietz 1953, Woodworth u. Schlosberg 1954, von Békésy 1960, Aschoff 1963, Keidel 1966, Erulkar 1972, Durlach u. Colburn 1978, Gatehouse 1979, Blauert 1983, Yost u. Gourevitch 1987, Wightman u. Kistler 1993, Begault 1994, Gilkey u. Anderson 1996).

  14. Implantate und Verfahren in der Augenheilkunde

    NASA Astrophysics Data System (ADS)

    Neuhann, Tobias H.

    Das in der Medizin mit am häufigsten verwendete Implantat weltweit ist die Intraokulare Linse (IOL). Die Gründe hierfür sind vielschichtig: einmal haben die Operationstechniken in den letzten 30 Jahren eine wesentliche Steigerung an Gleichmäßigkeit, Erfolg und Effizienz erfahren, zum anderen verursachen die gestiegenen Anforderungen des Alltags in den Industrienationen und im Berufsleben den höheren Anspruch an das Sehvermögen. Ist die menschliche Linse Ursache für schlechtes Sehvermögen, besteht meist eine Trübung des Linsenproteins. Diese Trübung nennt wird Volksmund Grauer Star genannt, wissenschaftlich die Katarakt (cataracta). Es gibt unterschiedliche Formen wie angeborene (congenita) oder erworbene, traumatische, krankheitsoder altersbedingte Formen [45]. Wird die eingetrübte Linse nun mittels moderner Operationsverfahren entfernt, muss für Ersatz dieses lichtbrechenden Mediums gesorgt werden [2].

  15. VDI-Richtlinien - mit Technischen Regeln Wirtschaftlichkeit erhöhen und Standards setzen

    NASA Astrophysics Data System (ADS)

    Mandelartz, Johannes

    Der Verein Deutscher Ingenieure e.V. (VDI) ist ein gemeinnütziger, wirtschaftlich und politisch unabhängiger, technisch-wissenschaftlicher Verein von Ingenieuren und Naturwissenschaftlern. Mit über 137 000 persönlich zugeordneten Mitgliedern ist er eine der größten Ingenieur-Vereinigungen Europas und gilt in Deutschland als führender Sprecher der Technik und der Ingenieure. 1856 gegründet, hat er viele für die Technik wesentliche Entwicklungen in Gang gesetzt, so im Bereich der technischen Überwachung, der technischen Regelsetzung und Normung, der Arbeitsstudien, im gewerblichen Rechtsschutz und im Patentwesen. Seit seiner Gründung sieht es der VDI als seine Aufgabe, "das Zusammenwirken aller geistiger Kräfte der Technik im Bewusstsein ethischer Verantwortung zu fördern“ und die Lebensmöglichkeiten aller Menschen durch Entwicklung und sinnvoller Anwendung technischer Mittel zu verbessern.

  16. Spatially resolved analysis of glycolipids and metabolites in living Synechococcus sp. PCC 7002 using nanospray desorption electrospray ionization.

    PubMed

    Lanekoff, Ingela; Geydebrekht, Oleg; Pinchuk, Grigoriy E; Konopka, Allan E; Laskin, Julia

    2013-04-07

    Microorganisms release a diversity of organic compounds that couple interspecies metabolism, enable communication, or provide benefits to other microbes. Increased knowledge of microbial metabolite production will contribute to understanding of the dynamic microbial world and can potentially lead to new developments in drug discovery, biofuel production, and clinical research. Nanospray desorption electrospray ionization (nano-DESI) is an ambient ionization technique that enables detailed chemical characterization of molecules from a specific location on a surface without special sample pretreatment. Due to its ambient nature, living bacterial colonies growing on agar plates can be rapidly analyzed without affecting the viability of the colony. In this study we demonstrate for the first time the utility of nano-DESI for spatial profiling of chemical gradients generated by microbial communities on agar plates. We found that despite the high salt content of the agar used in this study (~350 mM), nano-DESI analysis enables detailed characterization of metabolites produced by the Synechococcus sp. PCC 7002 colonies. High resolution mass spectrometry and MS/MS analysis of the living Synechococcus sp. PCC 7002 colonies allowed us to detect metabolites and lipids on the colony and on the surrounding agar, and confirm their identities. High sensitivity of nano-DESI enabled identification of several glycolipids that have not been previously reported by extracting the cells using conventional methods. Spatial profiling demonstrated that a majority of lipids and metabolites were localized on the colony while sucrose and glucosylglycerol, an osmoprotective compound produced by cyanobacteria, were secreted onto agar. Furthermore, we demonstrated that the chemical gradients of sucrose and glucosylglycerol on agar depend on the age of the colony. The methodology presented in this study will facilitate future studies focused on molecular-level characterization of interactions

  17. Collateral circulation formation determines the characteristic profiles of contrast-enhanced MRI in the infarcted myocardium of pigs

    PubMed Central

    Wang, Jian; Xiang, Bo; Lin, Hung-yu; Liu, Hong-yu; Freed, Darren; Arora, Rakesh C; Tian, Gang-hong

    2015-01-01

    Aim: To investigate the relationship between the collateral circulation and contrast-enhanced MR signal change for myocardial infarction (MI) in pigs. Methods: Pigs underwent permanent ligation of two diagonal branches of the left anterior descending artery. First-pass perfusion (FPP) MRI (for detecting myocardial perfusion abnormalities) and delayed enhancement (DE) MRI (for estimating myocardial infarction) using Gd-DTPA were performed at 2 h, 7 d and 4 weeks after the coronary occlusion. Myocardial blood flow (MBF) was evaluated using nonradioactive red-colored microspheres. Histological examination was performed to characterize the infarcts. Results: Acute MI performed at 2 h afterwards was characterized by hypoenhancement in both FPP- and DE-MRI, with small and almost unchanged FPP-signal intensity (SI) and DE-SI due to negligible MBF. Subacute MI detected 7 d afterwards showed small but significantly increaseing FPP-SI, and was visible as a sluggish hyperenhancement in DE-MRI with considerably higher DE-SI compared to the normal myocardium; the MBF approached the half-normal value. Chronic MI detected at 4 weeks afterwards showed increasing FPP-SI comparable to the normal myocardium, and a rapid hyperenhancement in DE-MRI with even higher DE-SI; the MBF was close to the normal value. The MBF was correlated with FPP-SI (r=+0.94, P<0.01) and with the peak DE-SI (r=+0.92, P<0.01) at the three MI stages. Remodeled vessels were observed at intra-infarction and peri-infarction zones during the subacute and chronic periods. Conclusion: Progressive collateral recovery determines the characteristic profiles of contrast-enhanced MRI in acute, subacute and chronic myocardial infarction in pigs. The FPP- and DE-MRI signal profiles not only depend on the loss of tissue viability and enlarged interstitial space, but also on establishing a collateral circulation. PMID:25832427

  18. Current experiments in elementary particle physics. Revision

    SciTech Connect

    Galic, H.; Armstrong, F.E.; von Przewoski, B.

    1994-08-01

    This report contains summaries of 568 current and recent experiments in elementary particle physics. Experiments that finished taking data before 1988 are excluded. Included are experiments at BEPC (Beijing), BNL, CEBAF, CERN, CESR, DESY, FNAL, INS (Tokyo), ITEP (Moscow), IUCF (Bloomington), KEK, LAMPF, Novosibirsk, PNPI (St. Petersburg), PSI, Saclay, Serpukhov, SLAC, and TRIUMF, and also several underground and underwater experiments. Instructions are given for remote searching of the computer database (maintained under the SLAC/SPIRES system) that contains the summaries.

  19. Introduction

    NASA Astrophysics Data System (ADS)

    Aßmann, Ralph; Ferrario, Massimo; Osterhoff, Jens; Specka, Arnd

    2014-03-01

    The 1st European Advanced Accelerator Concepts workshop (EAAC 2013) was the first workshop in a new series. The European Network for Novel Accelerators (EuroNNAc) initiated it. The European Union (EU), the European Coordination for Accelerator R&D (EuCARD2), CERN, DESY, ecole Polytechnique and INFN provided the financial and organizational support required for preparing the event. Here we explain the context and scope of this new workshop series.

  20. Current experiments in elementary-particle physics - March 1983

    SciTech Connect

    Wohl, C.G.; Armstrong, F.E.; Rittenberg, A.

    1983-03-01

    Microfiche are included which contain summaries of 479 experiments in elementary particle physics. Experiments are included at the following laboratories: Brookhaven (BNL); CERN; CESR; DESY; Fermilab (FNAL); Institute for Nuclear Studies (INS); KEK; LAMPF; Serpukhov (SERP); SIN; SLAC; and TRIUMF. Also, summaries of proton decay experiments are included. A list of experiments and titles is included; and a beam-target-momentum index and a spokesperson index are given. Properties of beams at the facilities are tabulated. (WHK)

  1. Bunch length measurement at the Fermilab A0 photoinjector using a Martin-Puplett interferometer

    SciTech Connect

    Thurman-Keup, Randy; Fliller, Raymond Patrick; Kazakevich, Grigory; /Fermilab

    2008-05-01

    We present preliminary measurements of the electron bunch lengths at the Fermilab A0 Photoinjector using a Martin-Puplett interferometer on loan from DESY. The photoinjector provides a relatively wide range of bunch lengths through laser pulse width adjustment and compression of the beam using a magnetic chicane. We present comparisons of data with simulations that account for diffraction distortions in the signal and discuss future plans for improving the measurement.

  2. Clinical Application of Ambient Ionization Mass Spectrometry

    PubMed Central

    Li, Li-Hua; Hsieh, Hua-Yi; Hsu, Cheng-Chih

    2017-01-01

    Ambient ionization allows mass spectrometry analysis directly on the sample surface under atmospheric pressure with almost zero sample pretreatment. Since the development of desorption electrospray ionization (DESI) in 2004, many other ambient ionization techniques were developed. Due to their simplicity and low operation cost, rapid and on-site clinical mass spectrometry analysis becomes real. In this review, we will highlight some of the most widely used ambient ionization mass spectrometry approaches and their applications in clinical study. PMID:28337399

  3. Collateral circulation formation determines the characteristic profiles of contrast-enhanced MRI in the infarcted myocardium of pigs.

    PubMed

    Wang, Jian; Xiang, Bo; Lin, Hung-yu; Liu, Hong-yu; Freed, Darren; Arora, Rakesh C; Tian, Gang-hong

    2015-04-01

    To investigate the relationship between the collateral circulation and contrast-enhanced MR signal change for myocardial infarction (MI) in pigs. Pigs underwent permanent ligation of two diagonal branches of the left anterior descending artery. First-pass perfusion (FPP) MRI (for detecting myocardial perfusion abnormalities) and delayed enhancement (DE) MRI (for estimating myocardial infarction) using Gd-DTPA were performed at 2 h, 7 d and 4 weeks after the coronary occlusion. Myocardial blood flow (MBF) was evaluated using nonradioactive red-colored microspheres. Histological examination was performed to characterize the infarcts. Acute MI performed at 2 h afterwards was characterized by hypoenhancement in both FPP- and DE-MRI, with small and almost unchanged FPP-signal intensity (SI) and DE-SI due to negligible MBF. Subacute MI detected 7 d afterwards showed small but significantly increaseing FPP-SI, and was visible as a sluggish hyperenhancement in DE-MRI with considerably higher DE-SI compared to the normal myocardium; the MBF approached the half-normal value. Chronic MI detected at 4 weeks afterwards showed increasing FPP-SI comparable to the normal myocardium, and a rapid hyperenhancement in DE-MRI with even higher DE-SI; the MBF was close to the normal value. The MBF was correlated with FPP-SI (r=+0.94, P<0.01) and with the peak DE-SI (r=+0.92, P<0.01) at the three MI stages. Remodeled vessels were observed at intra-infarction and peri-infarction zones during the subacute and chronic periods. Progressive collateral recovery determines the characteristic profiles of contrast-enhanced MRI in acute, subacute and chronic myocardial infarction in pigs. The FPP- and DE-MRI signal profiles not only depend on the loss of tissue viability and enlarged interstitial space, but also on establishing a collateral circulation.

  4. Distinctive Glycerophospholipid Profiles of Human Seminoma and Adjacent Normal Tissues by Desorption Electrospray Ionization Imaging Mass Spectrometry

    NASA Astrophysics Data System (ADS)

    Masterson, Timothy A.; Dill, Allison L.; Eberlin, Livia S.; Mattarozzi, Monica; Cheng, Liang; Beck, Stephen D. W.; Bianchi, Federica; Cooks, R. Graham

    2011-08-01

    Desorption electrospray ionization mass spectrometry (DESI-MS) has been successfully used to discriminate between normal and cancerous human tissue from different anatomical sites. On the basis of this, DESI-MS imaging was used to characterize human seminoma and adjacent normal tissue. Seminoma and adjacent normal paired human tissue sections (40 tissues) from 15 patients undergoing radical orchiectomy were flash frozen in liquid nitrogen and sectioned to 15 μm thickness and thaw mounted to glass slides. The entire sample was two-dimensionally analyzed by the charged solvent spray to form a molecular image of the biological tissue. DESI-MS images were compared with formalin-fixed, hematoxylin and eosin (H&E) stained slides of the same material. Increased signal intensity was detected for two seminolipids [seminolipid (16:0/16:0) and seminolipid (30:0)] in the normal tubule testis tissue; these compounds were undetectable in seminoma tissue, as well as from the surrounding fat, muscle, and blood vessels. A glycerophosphoinositol [PI(18:0/20:4)] was also found at increased intensity in the normal testes tubule tissue when compared with seminoma tissue. Ascorbic acid (i.e., vitamin C) was found at increased amounts in seminoma tissue when compared with normal tissue. DESI-MS analysis was successfully used to visualize the location of several types of molecules across human seminoma and normal tissues. Discrimination between seminoma and adjacent normal testes tubules was achieved on the basis of the spatial distributions and varying intensities of particular lipid species as well as ascorbic acid. The increased presence of ascorbic acid within seminoma compared with normal seminiferous tubules was previously unknown.

  5. Are the /J/ψ and χc /A dependencies the same?

    NASA Astrophysics Data System (ADS)

    Vogt, R.

    2002-03-01

    It has been empirically observed that the dependence of J/ ψ and ψ' production on nuclear mass number A is very similar. This has been postulated to be due to the predominance of color-octet preresonant states in charmonium production and absorption. Two new experiments, NA60 at CERN and HERA-B at DESY, will measure the χcA dependence for the first time. These measurements should shed new light on the charmonium production and absorption mechanisms.

  6. Current experiments in elementary-particle physics

    NASA Astrophysics Data System (ADS)

    Wohl, C. G.; Armstrong, F. E.; Rittenberg, A.

    1983-03-01

    Microfiche are included which contain summaries of 479 experiments in elementary particle physics. Experiments are included at the following laboratories: Brookhaven (ENL); CERN; DESY; Fermilab. (FNAL); Institute for Nuclear Studies (INS); KEK; LAMPF; Serpukhov (SERP); SIN; SLAC; and TRIUMP. Also, summries of proton decay experiments are included. A list of experiments and titles is included; and a beam-target-momentum index and a spokesperson index are given. Properties of beams at the facilities are tabulated.

  7. Orbit and dispersion tool at European XFEL injector

    NASA Astrophysics Data System (ADS)

    Ghazaryan, N. G.; Castro, E.; Decking, W.

    2017-07-01

    Trajectory and electron beam size play an essential role in Free Electron Laser (FEL) obtainment. Since transverse dispersion changes off-energy particle trajectories and increases the effective beam size, dispersion and orbit must constantly be controlled and corrected along the whole lattice. In this paper the principles underlying the orbit and dispersion correction tool, developed at DESY, are described. The results of its testing on European XFEL injector are presented.

  8. Commissioning and early operating experience with the Fermilab horizontal test facility

    SciTech Connect

    Carcagno, R.; Chase, B.; Harms, E.; Hocker, A.; Prieto, P.; Reid, J.; Rowe, A.; Theilacker, J.; Votava, M.; /Fermilab

    2007-10-01

    Fermilab has constructed a facility for testing dressed superconducting radiofrequency (RF) cavities at 1.8 K with high-power pulsed RF. This test stand was designed to test both 9-cell 1.3 GHz TESLA-style cavities and 9-cell 3.9 GHz cavities being built by Fermilab for DESY's TTF-FLASH facility. An overview of the test stand and a description of its initial commissioning is described here.

  9. Capture cavity II results at FNAL

    SciTech Connect

    Branlard, Julien; Chase, Brian; Cancelo, G.; Carcagno, R.; Edwards, H.; Fliller, R.; Hanna, B.; Harms, Elvan; Hocker, A.; Koeth, T.; Kucera, M.; /Fermilab

    2007-06-01

    As part of the research and development towards the International Linear Collider (ILC), several test facilities have been developed at Fermilab. This paper presents the latest Low Level RF (LLRF) results obtained with Capture Cavity II (CCII) at the ILC Test Accelerator (ILCTA) test facility. The main focus will be on controls and RF operations using the SIMCON based LLRF system developed in DESY [1]. Details about hardware upgrades and future work will be discussed.

  10. NUCLEAR PHYSICS: The First Nine-Cell TESLA Cavity Made in China

    NASA Astrophysics Data System (ADS)

    Lu, Xiang-Yang; Quan, Sheng-Wen; Zhang, Bao-Cheng; Hao, Jian-Kui; Zhu, Feng; Lin, Lin; Xu, Wen-Can; Wang, Er-Dong; Wang, Fang; Jin, Song; Xin, Tian-Mu; Yao, Zhong-Yuan; Chen, Jia-Er; Zhao, Kui

    2008-11-01

    A totally home-made 9-cell TESLA type superconducting cavity is made at Peking University. The cavity fabrication is according to DESY specification. The cavity is made of high purity niobium from OTIC, Ningxia. The electron beam welding is carried out at Harbin Institute of Technology, Harbin. By the cooperation, the cavity is tested at Thomas Jefferson National Accelerator Facility, USA. The preliminary result shows the acceleration gradient Eacc is 23MV/m without quench and has potential for improvement.

  11. Nuclear Physics Laboratory, University of Colorado, Final Progress Report

    SciTech Connect

    Kinney, E.R., ed.

    2004-05-12

    OAK-B135 The results and progress of research funded by DOE grant number DOE-FG03-95ER40913 at the University of Colorado at Boulder is described. Includes work performed at the HERMES experiment at DESY to study the quark structure of the nucleon and the hadronization process in nuclei, as well as hadronic reactions studied at LAMPF, KEK, and Fermilab.

  12. The Spatial Distribution of Alkaloids in Psychotria prunifolia (Kunth) Steyerm and Palicourea coriacea (Cham.) K. Schum Leaves Analysed by Desorption Electrospray Ionisation Mass Spectrometry Imaging.

    PubMed

    Kato, Lucilia; Moraes, Aline Pereira; de Oliveira, Cecília Maria Alves; Vaz, Boniek Gontijo; de Almeida Gonçalves, Letícia; E Silva, Elienai Cândida; Janfelt, Christian

    2017-09-06

    Species of the genera Psychotria and Palicourea are sources of indole alkaloids, however, the distribution of alkaloids within the plants is not known. Analysing the spatial distribution using desorption electrospray ionisation mass spectrometry imaging (DESI-MSI) has become attractive due to its simplicity and high selectivity compared to traditional histochemical techniques. To apply DESI-MSI to visualise the alkaloid distribution on the leaf surface of Psychotria prunifolia and Palicourea coriacea and to compare the distributions with HPLC-MS and histochemical analyses. Based upon previous structure elucidation studies, four alkaloids targeted in this study were identified using high resolution mass spectrometry by direct infusion of plant extracts, and their distributions were imaged by DESI-MSI via tissue imprints on a porous Teflon surface. Relative quantitation of the four alkaloids was obtained by HPLC-MS/MS analysis performed using multiple-reaction monitoring (MRM) mode on a triple quadrupole mass spectrometer. Alkaloids showed distinct distributions on the leaf surfaces. Prunifoleine was mainly present in the midrib, while 10-hydroxyisodeppeaninol was concentrated close to the petiole; a uniform distribution of 10-hydroxyantirhine was observed in the whole leaf of Psychotria prunifolia. The imprinted image from the Palicourea coriacea leaf also showed a homogeneous distribution of calycanthine throughout the leaf surface. Different distributions were found for three alkaloids in Psychotria prunifolia, and the distributions found by MSI were in complete accordance with HPLC-MS analysis and histochemical results. The DESI-MSI technique was therefore demonstrated to provide reliable information about the spatial distribution of metabolites in plants. Copyright © 2017 John Wiley & Sons, Ltd. Copyright © 2017 John Wiley & Sons, Ltd.

  13. Resonance control in SRF cavities at FNAL

    SciTech Connect

    Schappert, W.; Pischalnikov, Y.; Scorrano, M.; /INFN, Pisa

    2011-03-01

    The Lorentz force can dynamically detune pulsed Superconducting RF cavities. Considerable additional RF power can be required to maintain the accelerating gradient if no effort is made to compensate for this detuning. Compensation systems using piezo actuators have been used successfully at DESY and elsewhere to control Lorentz Force Detuning (LFD). Recently, Fermilab has developed an adaptive compensation system for cavities in the Horizontal Test Stand, in the SRF Accelerator Test Facility, and for the proposed Project X.

  14. Desorption electro-flow focusing ionization of explosives and narcotics for ambient pressure mass spectrometry.

    PubMed

    Forbes, Thomas P; Brewer, Tim M; Gillen, Greg

    2013-10-07

    Desorption electro-flow focusing ionization (DEFFI), a desorption-based ambient ion source, was developed, characterized, and evaluated as a possible source for field deployable ambient pressure mass spectrometry (APMS). DEFFI, based on an electro-flow focusing system, provides a unique configuration for the generation of highly charged energetic droplets for sample analysis and ionization. A concentrically flowing carrier gas focuses the liquid emanating from a capillary through a small orifice, generating a steady fluid jet. An electric field is applied across this jet formation region, producing high velocity charged droplets that impinge on an analyte laden surface. This configuration separates the jet charging region from the external environment, eliminating detrimental effects from droplet space charge or target surface charging. The sample desorption and ionization processes operate similar to desorption electrospray ionization (DESI). DEFFI demonstrated strong signal intensities and improved signal-to-noise ratios in both positive and negative mode mass spectrometry for narcotics, i.e., cocaine, and explosives, i.e., cyclotrimethylenetrinitramine (RDX), respectively. A characterization of DEFFI ionization mechanisms identified operation regimes of both electrospray and corona discharge based analyte ionization, as well as limitations in overall signal. In addition, the DEFFI response was directly compared to DESI-MS under similar operating conditions. This comparison established a wider and more stable optimal operating range, while requiring an order of magnitude lower applied gas pressure and applied potential for DEFFI than DESI. These reductions are due to the physical mode of jet formation and geometric configuration differences between DEFFI and DESI, pointing to a potential benefit of DEFFI-MS for field implementation.

  15. Search for hadronic b-->u decays

    NASA Astrophysics Data System (ADS)

    Albrecht, H.; Gläser, R.; Harder, G.; Krüger, A.; Nilsson, A. W.; Nippe, A.; Oest, T.; Reidenbach, M.; Schäfer, M.; Schmidt-Parzefall, W.; Schröder, H.; Schulz, H. D.; Sefkow, F.; Wurth, R.; Appuhn, R. D.; Drescher, A.; Hast, C.; Herrera, G.; Kolanoski, H.; Lange, A.; Lindner, A.; Mankel, R.; Scheck, H.; Schweda, G.; Spaan, B.; Walther, A.; Wegener, D.; Paulini, M.; Reim, K.; Volland, U.; Wegener, H.; Funk, W.; Stiewe, J.; Werner, S.; Ball, S.; Gabriel, J. C.; Geyer, C.; Hölscher, A.; Hofmann, W.; Holzer, B.; Khan, S.; Spengler, J.; Charlesworth, C. E. K.; Edwards, K. W.; Frisken, W. R.; Kapitza, H.; Krieger, P.; Kutschke, R.; Macfarlene, D. B.; McLean, K. W.; Orr, R. S.; Parsons, J. A.; Patel, P. M.; Prentice, J. D.; Seidel, S. C.; Swain, J. D.; Tsipolitis, G.; Tzamariudaki, K.; Yoon, T.-S.; Ruf, T.; Schael, S.; Schubert, K. R.; Strahl, K.; Waldi, R.; Weseler, S.; Boštjančič, B.; Kernel, G.; Križan, P.; Križnič, E.; Cronström, H. I.; Jönsson, L.; Babaev, A.; Danilo, M.; Fominykh, B.; Golutvin, A.; Gorelov, I.; Lubimov, V.; Rostovtsev, A.; Semenov, A.; Semenov, S.; Shevchenko, V.; Soloshenko, V.; Tchistilin, V.; Tichomirov, I.; Zaitsev, Yu.; Childers, R.; Darden, C. W.; Argus Collaboration

    1990-05-01

    Using the ARGUS detector at the e +e - storage ring DORIS II at DESY, we searched for b→u transitions in exclusive hadronic B meson decays. A systematic analysis of B decays into pions has been performed for decay modes with 2-7 pions in the final state. In none of the decays a positive signal was observed. The upper limits obtained on various branching ratios are consistent with the current model predictions.

  16. Transition radiation effects in superconducting granules

    NASA Technical Reports Server (NTRS)

    Drukier, A. K.; Valette, C.; Waysand, G.; Peters, F.; Yuan, L. C. L.

    1975-01-01

    The paper examines the use of a superheated superconducting suspension as a transition radiation detector of relativistic charged particles. The suspensions would also be used for detecting low-energy X-ray photons. The DESY experiment for developing such a superconducting detector has been carried out at a 7 GeV electron synchrotron. The detection is shown to be based on the recordable flipping of the state of a single superconducting grain.

  17. Experimental Program Final Technical Progress Report: 15 February 2007 to 30 September 2012

    SciTech Connect

    Kinney, Edward R.

    2014-09-12

    This is the final technical report of the grant DE-FG02-04ER41301 to the University of Colorado at Boulder entitled "Intermediate Energy Nuclear Physics" and describes the results of our funded activities during the period 15 February 2007 to 30 September 2012. These activities were primarily carried out at Fermilab, RHIC, and the German lab DESY. Significant advances in these experiments were carried out by members of the Colorado group and are described in detail.

  18. Radiative effects in scattering of polarized leptons by polarized nucleons and light nuclei

    SciTech Connect

    Igor Akushevich; A. Ilyichev; N. Shumeiko

    2001-07-01

    Recent developments in the field of radiative effects in polarized lepton-nuclear scattering are reviewed. The processes of inclusive, semi-inclusive, diffractive and elastic scattering are considered. The explicit formulae obtained within the covariant approach are discussed. FORTRAN codes POLRAD, RADGEN, HAPRAD, DIFFRAD and MASCARAD created on the basis of the formulae are briefly described. Applications for data analysis of the current experiments on lepton-nuclear scattering at CERN, DESY, SLAC and TJNAF are illustrated by numerical results.

  19. The HERA-B vertex detector system

    NASA Astrophysics Data System (ADS)

    Bauer, C.; Bräuer, M.; Glebe, T.; Hofmann, W.; Jagla, T.; Klefenz, F.; Knöpfle, K. T.; Pugatch, V.; Schmelling, M.; Schwingenheuer, B.; Sexauer, E.; Trunk, U.; Wanke, R.; Zurheide, F.; Abt, I.; Dressel, M.; Kisel, I.; Masciocchi, S.; Moshous, B.; Perschke, T.; Sang, M.; Schaller, S.; Wagner, W.

    2000-10-01

    The HERA-B experiment is being built to measure CP violation in the B-system using internal targets at the HERA proton storage ring at DESY. This paper presents an overview of its vertex detector which - apart from an additional superlayer - is realized by a system of 20 Roman pots containing seven superlayers of double-sided silicon microstrip detectors that are operated at 10 mm distance from the proton beam in a high-radiation environment.

  20. Materials Requirements for Advanced Energy Systems - New Fuels. Volume 3: Materials Research Needs in Advanced Energy Systems Using New Fuels

    DTIC Science & Technology

    1974-07-01

    envi. motive types). approximate: 1.2.2 Modifications required Desi-gn. None expected. None. for compressor/turbi ne matching. 1.2.3 Combustors...dlssociatod to improve combustion. 5.2.2 Engine modifications Engineering develop- None. None. and addition of NH, ment. dissociation equipment. 5.3.1...materials of construction, electrode materials modification . -VIII-12 Table VIII-l (Conclude-) MATERIALS RESEAROI DEVELOPPYNT AND TESTING N£eMFM r3 SUPPORT

  1. Operating experience with high beta superconducting rf cavities

    SciTech Connect

    Dylla, H.F.; Doolittle, L.R.; Benesch, J.F.

    1993-06-01

    The number of installed and operational {beta} = 1 superconducting rf cavities has grown significantly over the last two years in accelerator laboratories in Europe, Japan and the US. The total installed acceleration capability as of mid-1993 is approximately 1 GeV at nominal gradients. Major installations at CERN, DESY, KEK and CEBAF have provided large increments to the installed base and valuable operational experience. A selection of test data and operational experience gathered to date is reviewed.

  2. Diffractive Higgs boson production at the Fermilab Tevatron and the CERN Large Hadron Collider.

    PubMed

    Enberg, R; Ingelman, G; Kissavos, A; Tîmneanu, N

    2002-08-19

    Improved possibilities to find the Higgs boson in diffractive events, having less hadronic activity, depend on whether the cross section is large enough. Based on the soft color interaction models that successfully describe diffractive hard scattering at DESY HERA and the Fermilab Tevatron, we find that only a few diffractive Higgs events may be produced at the Tevatron, but we predict a substantial rate at the CERN Large Hadron Collider.

  3. Enabling Multinational Communications with CENTRIXS

    DTIC Science & Technology

    2010-06-01

    JAN-FEB 1 CFAK MALABAR OCT 4 – CFAKs/ BGAN ANNUALEX NOV 2 CFAKs RIMPAC JUL 18 CFAKs Total Assets: CFAKs = 21+ CPOKs = 9 1 Portable Inmarsat 3 BGANs ...Indonesia Demo NOV, 1 CFAK, BGAN CARAT/SEACAT MAY – AUG 4 CFAKs//4 CPOKs DESI OCT 1 CPOK CSOFEX 08-4 OCT 2 CFAKs KITP OCT 1 CFAK 2005 – 8 installs 2008 – 55+ installs

  4. Automated Pipeline for Purification, Biophysical and X-Ray Analysis of Biomacromolecular Solutions

    PubMed Central

    Graewert, Melissa A.; Franke, Daniel; Jeffries, Cy M.; Blanchet, Clement E.; Ruskule, Darja; Kuhle, Katja; Flieger, Antje; Schäfer, Bernd; Tartsch, Bernd; Meijers, Rob; Svergun, Dmitri I.

    2015-01-01

    Small angle X-ray scattering (SAXS), an increasingly popular method for structural analysis of biological macromolecules in solution, is often hampered by inherent sample polydispersity. We developed an all-in-one system combining in-line sample component separation with parallel biophysical and SAXS characterization of the separated components. The system coupled to an automated data analysis pipeline provides a novel tool to study difficult samples at the P12 synchrotron beamline (PETRA-3, EMBL/DESY, Hamburg). PMID:26030009

  5. Federal Research: Super Collider Estimates and Germany’s Industrially Produced Magnets

    DTIC Science & Technology

    1991-02-12

    DESY Deutsches Elektronen-Synchrotron DOE Department of Energy GeV billion electron volts HEPAP High Energy Physics Advisory Panel HERA Hadron Electron...Advisory Panel ( HEPAP ) report indicated that reducing the energy would risk losing important physics. The panel fully endorsed the design as well as the...the Laboratory’s work. Two DOE reviews were completed by OER and ICE staff. At DOE’s request, the third independent review was conducted by the HEPAP

  6. Experimental Plans to Explore Dielectric Wakefield Acceleration in the THZ Regime

    SciTech Connect

    Lemery, F.; Mihalcea, D.; Piot, P.; Behrens, C.; Elsen, E.; Flottmann, K.; Gerth, C.; Kube, G.; Schmidt, B.; Osterhoff, J.; Stoltz, P.

    2011-09-07

    Dielectric wakefield accelerators have shown great promise toward high-gradient acceleration. We investigate the performances of a possible experiment under consideration at the FLASH facility in DESY to explore wakefield acceleration with an enhanced transformer ratio. The experiment capitalizes on a unique pulse shaping capability recently demonstrated at this facility. In addition, the facility incorporates a superconducting linear accelerator that could generate bunch trains with closely spaced bunches thereby opening the exploration of potential dynamical effects in dielectric wakefield accelerators.

  7. Search for rare B decays

    NASA Astrophysics Data System (ADS)

    Albrecht, H.; Hamacher, T.; Hofmann, R. P.; Kirchhoff, T.; Mankel, R.; Nau, A.; Nowak, S.; Reßing, D.; Schröder, H.; Schulz, H. D.; Walter, M.; Wurth, R.; Hast, C.; Kapitza, H.; Kolanoski, H.; Kosche, A.; Lange, A.; Lindner, A.; Schieber, M.; Siegmund, T.; Spaan, B.; Thurn, H.; Töpfer, D.; Wegener, D.; Eckstein, P.; Frankl, C.; Graf, J.; Schmidtler, M.; Schramm, M.; Schubert, K. R.; Schwierz, R.; Waldi, R.; Reim, K.; Wegener, H.; Eckmann, R.; Kuipers, H.; Mai, O.; Mundt, R.; Oest, T.; Reiner, R.; Schmidt-Parzefall, W.; Stiewe, J.; Werner, S.; Ehret, K.; Hofmann, W.; Hüpper, A.; Knöpfle, K. T.; Spengler, J.; Krieger, P.; Macfarlane, D. B.; Prentice, J. D.; Saull, P. R. B.; Tzamariudaki, K.; van de Water, R. G.; Yoon, T.-S.; Schneider, M.; Weseler, S.; Kernel, G.; Križan, P.; Križnič, E.; Podobnik, T.; Živko, T.; Balagura, V.; Barsuk, S.; Belyaev, I.; Chistov, R.; Danilov, M.; Gershtein, L.; Gershtein, Yu.; Golutyin, A.; Korolko, I.; Kostina, G.; Litvintsev, D.; Pakhlov, P.; Semenov, S.; Snizhko, A.; Tichomirov, I.; Zaitsev, Yu.; Argus Collaboration

    1995-02-01

    Using the ARGUS detector at the e +e - storage ring DORIS II at DESY, we have searched for decays b → sgluon through full reconstruction of a whole event. Two B overlineB decays were found with one of B meson decaying into a final state without charmed particles. We also obtained an upper limit of Br(B + → τ+ντ) of 1.04% at 90% CL.

  8. Measurement of inclusive baryon production in B meson decays

    NASA Astrophysics Data System (ADS)

    Albrecht, H.; Cronström, H. I.; Ehrlichmann, H.; Hamacher, T.; Hofmann, R. P.; Kirchhoff, T.; Nau, A.; Nowak, S.; Reidenbach, M.; Reiner, R.; Schröder, H.; Schulz, H. D.; Walter, M.; Wurth, R.; Appuhn, R. D.; Hast, C.; Kolanoski, H.; Lange, A.; Lindner, A.; Mankel, R.; Schieber, M.; Siegmund, T.; Spaan, B.; Thurn, H.; Töpfer, D.; Walther, A.; Wegener, D.; Paulini, M.; Reim, K.; Wegener, H.; Mundt, R.; Oest, T.; Schmidt-Parzefall, W.; Funk, W.; Stiewe, J.; Werner, S.; Ehret, K.; Hölscher, A.; Hofmann, W.; Hüpper, A.; Khan, S.; Knöpfle, K. T.; Spengler, J.; Britton, D. I.; Charlesworth, C. E. K.; Edwards, K. W.; Hyatt, E. R. F.; Kapitza, H.; Krieger, P.; Macfarlane, D. B.; Patel, P. M.; Prentice, J. D.; Saull, P. R. B.; Seidel, S. C.; Tsamariudaki, K.; van de Water, R. G.; Yoon, T.-S.; Reßing, D.; Śchmidtler, M.; Schneider, M.; Schubert, K. R.; Strahl, K.; Waldi, R.; Weseler, S.; Kernel, G.; Križan, P.; Križnič, E.; Podobnik, T.; Zivko, T.; Jönsson, L.; Balagura, V.; Belyaev, I.; Danilov, M.; Droutskoy, A.; Golutvin, A.; Gorelov, I.; Kostina, G.; Lubimov, V.; Murat, P.; Pakhlov, P.; Ratnikov, F.; Semenov, S.; Shibaev, V.; Soloshenko, V.; Tichomirov, I.; Zaitsev, Yu.

    1992-03-01

    Using the ARGUS detector at the e + e - storage ring DORIS II at DESY, we have studied B meson decays into baryons p and Λ. From the simultaneous analysis of p and Λ yields, p bar p and Λbar p correlations, and various lepton-baryon and lepton-baryon-antibaryon correlations the inclusive branching ratio is found to be BR ( B→baryons)=(6.8±0.5±0.3)%.

  9. Search for b-->sX+X- in exclusive decays of B mesons

    NASA Astrophysics Data System (ADS)

    Albrecht, H.; Gläser, R.; Harder, G.; Krüger, A.; Nippe, A.; Oest, T.; Reidenbach, M.; Schäfer, M.; Schmidt-Parzefall, W.; Schröder, H.; Schulz, H. D.; Sefkow, F.; Wurth, R.; Appuhn, R. D.; Drescher, A.; Hast, C.; Herrera, G.; Kolanoski, H.; Lange, A.; Linder, A.; Mankel, R.; Scheck, H.; Schweda, G.; Spaan, B.; Walther, A.; Wegener, D.; Paulini, M.; Reim, K.; Volland, U.; Wegener, H.; Funk, W.; Stiewe, J.; Werner, S.; Ball, S.; Gabriel, J. C.; Geyer, C.; Hölscher, A.; Hofmann, W.; Holzer, B.; Khan, S.; Spengler, J.; Charlesworth, C. E. K.; Edwards, K. W.; Frisken, W. R.; Kapitza, H.; Krieger, P.; Kutschke, R.; Macfarlane, D. B.; McLean, K. W.; Orr, R. S.; Parsons, J. A.; Patel, P. M.; Prentice, J. D.; Seidel, S. C.; Swain, J. D.; Tsipolitis, G.; Yoon, T.-S.; Davis, R.; Ruf, T.; Schael, S.; Schubert, K. R.; Strahl, K.; Waldi, R.; Weseler, S.; Boštjančič, B.; Kernel, G.; Križan, P.; Križnič, E.; Pleško, M.; Cronström, H. I.; Jönsson, L.; Nilsson, A. W.; Babaev, A.; Danilov, M.; Fominykh, B.; Golutvin, A.; Gorelov, I.; Lubimov, V.; Rostovtsev, A.; Semenov, A.; Semenov, S.; Shevchenko, V.; Soloshenko, V.; Tchistilin, V.; Tichomirov, I.; Zaitsev, Yu.; Childers, R.; Darden, C. W.

    1991-06-01

    Using the ARGUS detector at the e+e- storage ring DORIS II at DESY, penguin decays of B mesons involving b-->sX+X- have been searched for, where X is one of e, μ, π, or K. No evidence for these decays was found and upoer limits are quoted. These numbers represent important constraints of flavour-changing neutral currents in B meson decays and probe the heavy-quark and Higgs sectors of the standard model.

  10. A spin-parity analysis of γγ-->ϱ+ϱ-

    NASA Astrophysics Data System (ADS)

    Albrecht, H.; Ehrlichmann, H.; Hamacher, T.; Krüger, A.; Nau, A.; Nippe, A.; Reidenbach, M.; Schäfer, M.; Schröder, H.; Schulz, H. D.; Sefkow, F.; Wurth, R.; Appuhn, R. D.; Hast, C.; Herrera, G.; Kolanoski, H.; Lange, A.; Lindner, A.; Mankel, R.; Schieber, M.; Schweda, G.; Siegmund, T.; Spaan, B.; Thurn, H.; Walther, A.; Wegener, D.; Paulini, M.; Reim, K.; Volland, U.; Wegener, H.; Mundt, R.; Oest, T.; Schmidt-Parzefall, W.; Funk, W.; Stiewe, J.; Werner, S.; Ball, S.; Gabriel, J. C.; Geyer, C.; Hölscher, A.; Hofmann, W.; Holzer, B.; Khan, S.; Knöpfle, K. T.; Spengler, J.; Britton, D. I.; Charlesworth, C. E. K.; Edwards, K. W.; Kapitza, H.; Krieger, P.; Kutschke, R.; Macfarlane, D. B.; Orr, R. S.; Patel, P. M.; Prentice, J. D.; Seidel, S. C.; Tsipolitis, G.; Tzamariudaki, K.; van de Water, R. G.; Yoon, T.-S.; Ressing, D.; Schael, S.; Schubert, K. R.; Strahl, K.; Waldi, R.; Weseler, S.; Boštjančič, B.; Kernel, G.; Križan, P.; Križnič, P.; Živko, T.; Cronström, H. I.; Jönsson, L.; Babaev, A.; Balagura, V.; Danilov, M.; Droutskoy, A.; Fominykh, B.; Golutvin, A.; Gorelov, I.; Ratnikov, F.; Lubimov, V.; Rostovtsev, A.; Semenov, A.; Semenov, S.; Shevchenko, V.; Soloshenko, V.; Tichomirov, I.; Zaitsev, Yu.; Childers, R.; Darden, C. W.

    1991-09-01

    A spin-parity analysis of the ϱ+ϱ- system in the reaction γγ-->ϱ+ϱ--->Π+Π-Π0Π0 has been performed using the ARGUS detector at the e+e- storage ring DORIS II at DESY. The cross section is found to be dominated by the amplitudes JP = 0+ and JP = 2+ (Jz = 2). Supported by the US Department of Energy, under contract DE-AS09-80ER 10690.

  11. A measurement of the inclusive semileptonic decay fraction of charmed hadrons

    NASA Astrophysics Data System (ADS)

    Albrecht, H.; Ehrlichmann, H.; Hamacher, T.; Krüger, A.; Nau, A.; Nippe, A.; Reidenbach, M.; Schäfer, M.; Schröder, H.; Schulz, H. D.; Sefkow, F.; Wurth, R.; Appuhn, R. D.; Hast, C.; Herrera, G.; Kolanoski, H.; Lange, A.; Lindner, A.; Mankel, R.; Schieber, M.; Siegmund, T.; Spaan, B.; Thurn, H.; Töpfer, D.; Walther, A.; Wegener, D.; Paulini, M.; Reim, K.; Volland, U.; Wegener, H.; Mundt, R.; Oest, T.; Schmidt-Parzefall, W.; Funk, W.; Stiewe, J.; Werner, S.; Ball, S.; Gabriel, J. C.; Geyer, C.; Hölscher, A.; Hofmann, W.; Holzer, B.; Khan, S.; Knöpfle, K. T.; Spengler, J.; Britton, D. I.; Charlesworth, C. E. K.; Edwards, K. W.; Kapitza, H.; Krieger, P.; Kutschke, R.; Macfarlane, D. B.; Orr, R. S.; Patel, P. M.; Prentice, J. D.; Seidel, S. C.; Tsipolitis, G.; Tzamariudaki, K.; van de Water, R. G.; Yoon, T.-S.; Reßing, D.; Schael, S.; Schmidtler, M.; Schneider, M.; Schubert, K. R.; Strahl, K.; Waldi, R.; Weseler, S.; Boštjančič, B.; Kernel, G.; Križan, P.; Križnič, E.; Podobnik, T.; Živko, T.; Cronström, H. I.; Jönsson, L.; Balagura, V.; Danilov, M.; Droutskoy, A.; Fominykh, B.; Golutvin, A.; Gorelov, I.; Ratnikov, F.; Lubimov, V.; Rostovtsev, A.; Semenov, A.; Semenov, S.; Shevchenko, V.; Soloshenko, V.; Tichomirov, I.; Zaitsev, Yu.; Childers, R.; Darden, C. W.; Argus Collaboration

    1992-03-01

    Using the ARGUS detector at the DORIS-II storage ring at DESY, we have measured the inclusive semileptonic branching ratio of charmed hadrons produced in e +e - annihilition at =10GeV to be BR(c→ev eX)=(9.8±0.9± 0.50.6)% and BR(c→ μvμX)=(8.6±1.7± 0.70.8)%.

  12. Test of a high resolution drift chamber prototype

    NASA Astrophysics Data System (ADS)

    Commichau, V.; Deutschmann, M.; Draheim, K. J.; Fritze, P.; Hangarter, K.; Hawelka, P.; Herten, U.; Linnhöfer, D.; Tonutti, M.; Biermann, U.; Roderburg, E.; Walenta, A. H.; Anderhub, H.; Fehlmann, J.; Hofer, H.; Klein, M.; Paradiso, J. A.; Schreiber, J.; Viertel, G.

    1985-04-01

    The performance of a drift chamber prototype for a colliding beam vertex detector in a test beam at DESY is described. At one (two) atmosphere gas pressure a spatial resolution of 40 μm (30 μm) per wire for one cm drift length was achieved with a 100 MHz Flash-ADC system. An excellent double track resolution of better than 300 μm over the full drift length of 5 cm can be estimated.

  13. Status report from CDF

    SciTech Connect

    Grassmann, H.

    1992-04-01

    This paper discusses some of the more recent results from CDF. It is based on a talk given at the Desy Theory workshop The Standard Model at high Temperature and Density.'' The paper emphasizes processes at parton q{sup 2} which are high from the point of view of experiment. Possible implications on current developments in the analysis on theory and vice versa are discussed.

  14. Status report from CDF

    SciTech Connect

    Grassmann, H.

    1992-04-01

    This paper discusses some of the more recent results from CDF. It is based on a talk given at the Desy Theory workshop ``The Standard Model at high Temperature and Density.`` The paper emphasizes processes at parton q{sup 2} which are high from the point of view of experiment. Possible implications on current developments in the analysis on theory and vice versa are discussed.

  15. FEL beam characterization from measurements of the Wigner distribution function

    NASA Astrophysics Data System (ADS)

    Schäfer, Bernd; Flöter, Bernhard; Mey, Tobias; Juranic, Pavle; Kapitzki, Svea; Keitel, Barbara; Plönjes, Elke; Mann, Klaus; Tiedtke, Kai

    2011-10-01

    The Free-Electron-Laser FLASH at DESY has been characterized by a quantitative determination of the Wigner distribution function. The setup, comprising an ellipsodial mirror and a moveable extreme UV sensitive CCD detector, enables the mapping of two-dimensional phase spaces corresponding to the horizontal and vertical coordinate axes, respectively. For separable beams this yields the entire Wigner distribution, offering comprehensive information about spatial coherence properties, wavefront, beam profiles, as well as beam propagation parameters.

  16. Robert R. Wilson Prize Talk: RF Superconductivity - Technology of Choice

    NASA Astrophysics Data System (ADS)

    Edwards, Helen

    2003-04-01

    In 1992, Bjoern Wiik, soon to become Director of DESY, organized an international effort dedicated to a dramatic improvement in performance and cost of accelerating structures based on RF superconductivity. In this paper I will discuss the degree to which this goal has been achieved and the accompanying technology advances. Today, RF superconductivity is the technology of choice for high duty factor, high beam brightness applications and a serious competitor for use in a linear collider.

  17. Data acqusition for the Zeus central tracking detector

    SciTech Connect

    Quinton, S.

    1989-04-01

    The Zeus experiment is being installed on the Hera electron-proton collider being built at the Desy laboratory in Hamburg. The high beam crossover rate of the Hera machine will provide experience in data acquisition and triggering relevant to the SSC environment. This paper describes the Transputer based data acquisition for the Zeus Central Tracking Detector, and outlines some proposed development work on the use of parallel processing techniques in this field.

  18. A National Level Engagement Strategy: A Framework for Action

    DTIC Science & Technology

    2012-05-15

    hour oor rosponso, inclvdlno tho tlmo for review ing lnauuctiona. searching exiatlng dato eourcu. gothoru\\g end malntltinlng tho doto noodod, end ...U....,.yilt: C..didon Figure 9 - Engagement Framework • back to the desi red strategic ends . The model makes the in itial assumption that if the...complotlng end reviewing the colloctlon of lntormol lon. Sond common11 rogordlnp thle burdon u tlmeto or onv other ospoct of thiS collection ol

  19. Transition radiation effects in superconducting granules

    NASA Technical Reports Server (NTRS)

    Drukier, A. K.; Valette, C.; Waysand, G.; Peters, F.; Yuan, L. C. L.

    1975-01-01

    The paper examines the use of a superheated superconducting suspension as a transition radiation detector of relativistic charged particles. The suspensions would also be used for detecting low-energy X-ray photons. The DESY experiment for developing such a superconducting detector has been carried out at a 7 GeV electron synchrotron. The detection is shown to be based on the recordable flipping of the state of a single superconducting grain.

  20. U.C. Davis high energy particle physics research: Technical progress report -- 1990

    SciTech Connect

    1990-12-31

    Summaries of progress made for this period is given for each of the following areas: (1) Task A--Experiment, H1 detector at DESY; (2) Task C--Experiment, AMY detector at KEK; (3) Task D--Experiment, fixed target detectors at Fermilab; (4) Task F--Experiment, PEP detector at SLAC and pixel detector; (5) Task B--Theory, particle physics; and (6) Task E--Theory, particle physics.

  1. Longitudinal Bunch Shape Diagnostics With Coherent Radiation And a Transverse Deflecting Cavity at TTF2

    SciTech Connect

    Grimm, O.; Frohlich, L.; Klose, K.; Nagl, M.; Peters, O.; Rossbach, J.; Schlarb, H.; Emma, P.J.; McCormick, D.; Ross, M.; Smith, T.J.; /SLAC

    2005-08-04

    At the DESY TTF2 linear accelerator three special techniques to characterize the longitudinal charge distribution of the electron bunches that drive the free-electron laser are currently under study: electro-optical sampling, far-infrared spectral analysis of coherent radiation and the use of a transverse deflecting cavity to streak the bunch. The principles and implementations of the latter two are described in this paper. Details on electro-optical sampling can be found in [1].

  2. Evaluation of medical research performance--position paper of the Association of the Scientific Medical Societies in Germany (AWMF).

    PubMed

    Herrmann-Lingen, Christoph; Brunner, Edgar; Hildenbrand, Sibylle; Loew, Thomas H; Raupach, Tobias; Spies, Claudia; Treede, Rolf-Detlef; Vahl, Christian-Friedrich; Wenz, Hans-Jürgen

    2014-01-01

    Ziele: Die Evaluation medizinischer Forschungsleistung ist eine zentrale Voraussetzung für die gezielte Weiterentwicklung von Fakultäten, Forschungsschwerpunkten, Instituten bzw. Kliniken sowie Wissenschaftlerkarrieren. Sie basiert aber vielfach auf unklaren Zielvorstellungen und fragwürdigen Methoden und kann zu Fehlsteuerungen führen. Ziel der vorliegenden Arbeit ist eine Positionsbestimmung der wissenschaftlichen Medizin gegenüber den Zielen, Methoden und Konsequenzen ihrer Evaluation. Methoden: Im Rahmen des Berliner Forums der AWMF vom 18.10.2013 wurden von internationalen Experten Befunde zur Methodik der Evaluation medizinischer Forschungsleistung referiert, von Vertretern relevanter Wissenschaftsorganisationen diskutiert und in drei Adhoc-Schreibgruppen in einen Textentwurf gefasst. Dieser wurde mehrfach in der AWMF-Kommission für Leistungsevaluation in Forschung und Lehre sowie im AWMF-Präsidium diskutiert und in der vorliegenden finalen Fassung konsentiert.Ergebnisse: Die AWMF empfiehlt eine Veränderung des Systems der Bewertung medizinischer Forschungsleistungen. Evaluationen sollten eine a priori klar definierte und kommunizierte Zielsetzung besitzen und neben summativen auch formative Elemente enthalten. Neben sinnvollen aber nur in längeren Intervallen praktikablen informierten peer reviews können auch objektive Indikatoren zur Evaluation eingesetzt werden. Die Verwendung des Journal Impact Factors zur Bewertung einzelner Publikationen oder ihrer Autoren wird dabei abgelehnt. Der wissenschaftliche „Impact“ erfordert vielmehr eine multidimensionale Beurteilung, in der z.B. normierte Zitationsraten wissenschaftlicher Publikationen ebenso Berücksichtigung finden wie andere Formen der Rezeption in Fachwelt und Öffentlichkeit sowie Tätigkeiten im Bereich der Wissenschaftsorganisation, -synthese und -kommunikation. Daneben werden Vorschläge zu einer differenzierten Bewertung von Drittmitteleinwerbung und Nachwuchsförderung gemacht

  3. Zu einer inhaltsorientierten Theorie des Lernens und Lehrens der biologischen Evolution

    NASA Astrophysics Data System (ADS)

    Wallin, Anita

    Der Zweck dieser Studie (zwecks Überblick siehe dazu Abb. 9.1) war zu untersuchen, wie die Schüler der Sekundarstufe II ein Verständnis von der Theorie der biologischen Evolution entwickeln. Vom Ausgangspunkt "Vorurteile der Schüler“ ausgehend wurden Unterrichtssequenzen entwickelt und drei verschiedene Lernexperimente in einem zyklischen Prozess durchgeführt. Das Wissen der Schüler wurde vor, während und nach den Unterrichtssequenzen mit Hilfe von schriftlichen Tests, Interviews und Diskussionsrunden in kleinen Gruppen abgefragt. Etwa 80 % der Schüler hatten vor dem Unterricht alternative Vorstellungen von Evolution, und in dem Nachfolgetest erreichten circa 75 % ein wissenschaftliches Niveau. Die Argumentation der Schüler in den verschiedenen Tests wurde sorgfältig unter Rücksichtnahme auf Vorurteile, der konzeptionellen Struktur der Theorie der Evolution und den Zielen des Unterrichts analysiert. Daraus konnten Einsichten in solche Anforderungen an Lehren und Lernen gewonnen werden, die Herausforderungen an Schüler und Lehrer darstellen, wenn sie anfangen, evolutionäre Biologie zu lernen oder zu lehren. Ein wichtiges Ergebnis war, dass das Verständnis existierender Variation in einer Population der Schlüssel zum Verständnis von natürlicher Selektion ist. Die Ergebnisse sind in einer inhaltsorientierten Theorie zusammengefasst, welche aus drei verschiedenen Aspekten besteht: 1) den inhaltsspezifischen Aspekten, die einzigartig für jedes wissenschaftliche Feld sind; 2) den Aspekten, die die Natur der Wissenschaft betreffen; und 3) den allgemeinen Aspekten. Diese Theorie kann in neuen Experimenten getestet und weiter entwickelt werden.

  4. Detection of Metastatic Breast and Thyroid Cancer in Lymph Nodes by Desorption Electrospray Ionization Mass Spectrometry Imaging

    NASA Astrophysics Data System (ADS)

    Zhang, Jialing; Feider, Clara L.; Nagi, Chandandeep; Yu, Wendong; Carter, Stacey A.; Suliburk, James; Cao, Hop S. Tran; Eberlin, Livia S.

    2017-06-01

    Ambient ionization mass spectrometry has been widely applied to image lipids and metabolites in primary cancer tissues with the purpose of detecting and understanding metabolic changes associated with cancer development and progression. Here, we report the use of desorption electrospray ionization mass spectrometry (DESI-MS) to image metastatic breast and thyroid cancer in human lymph node tissues. Our results show clear alterations in lipid and metabolite distributions detected in the mass spectra profiles from 42 samples of metastatic thyroid tumors, metastatic breast tumors, and normal lymph node tissues. 2D DESI-MS ion images of selected molecular species allowed discrimination and visualization of specific histologic features within tissue sections, including regions of metastatic cancer, adjacent normal lymph node, and fibrosis or adipose tissues, which strongly correlated with pathologic findings. In thyroid cancer metastasis, increased relative abundances of ceramides and glycerophosphoinisitols were observed. In breast cancer metastasis, increased relative abundances of various fatty acids and specific glycerophospholipids were seen. Trends in the alterations in fatty acyl chain composition of lipid species were also observed through detailed mass spectra evaluation and chemical identification of molecular species. The results obtained demonstrate DESI-MSI as a potential clinical tool for the detection of breast and thyroid cancer metastasis in lymph nodes, although further validation is needed. [Figure not available: see fulltext.

  5. Spatially-Resolved Analysis of Glycolipids and Metabolites in Living Synechococcus sp. PCC7002 Using Nanospray Desorption Electrospray Ionization

    SciTech Connect

    Lanekoff, Ingela T.; Geydebrekht, Oleg V.; Pinchuk, Grigoriy E.; Konopka, Allan; Laskin, Julia

    2013-04-07

    Microorganisms release a diversity of organic compounds that couple interspecies metabolism, enable communication, or provide benefits to other microbes. Increased knowledge of microbial metabolite production will contribute to understanding of the dynamic microbial world and can potentially lead to new developments in drug discovery, biofuel production, and clinical research. Nanospray desorption electrospray ionization (nano-DESI) is an ambient ionization technique that enables detailed chemical characterization of molecules from a specific location on a surface without special sample pretreatment. Due to its ambient nature, living bacterial colonies growing on agar plates can be rapidly and non-destructively analyzed. We performed spatially resolved nano-DESI analysis of living Synechococcus sp. PCC 7002 colonies on agar plates. We use high resolution mass spectrometry and MS/MS analysis of the living Synechococcus sp. PCC 7002 colonies to detect metabolites and lipids, and confirm their identities. We found that despite the high salt content of the agar (osmolarity ca. 700 mM), nano-DESI analysis enables detailed characterization of metabolites produced by the colony. Using this technique, we identified several glycolipids found on the living colonies and examined the effect of the age of the colony on the chemical gradient of glucosylglycerol secreted onto agar.

  6. Detection of Metastatic Breast and Thyroid Cancer in Lymph Nodes by Desorption Electrospray Ionization Mass Spectrometry Imaging

    NASA Astrophysics Data System (ADS)

    Zhang, Jialing; Feider, Clara L.; Nagi, Chandandeep; Yu, Wendong; Carter, Stacey A.; Suliburk, James; Cao, Hop S. Tran; Eberlin, Livia S.

    2017-02-01

    Ambient ionization mass spectrometry has been widely applied to image lipids and metabolites in primary cancer tissues with the purpose of detecting and understanding metabolic changes associated with cancer development and progression. Here, we report the use of desorption electrospray ionization mass spectrometry (DESI-MS) to image metastatic breast and thyroid cancer in human lymph node tissues. Our results show clear alterations in lipid and metabolite distributions detected in the mass spectra profiles from 42 samples of metastatic thyroid tumors, metastatic breast tumors, and normal lymph node tissues. 2D DESI-MS ion images of selected molecular species allowed discrimination and visualization of specific histologic features within tissue sections, including regions of metastatic cancer, adjacent normal lymph node, and fibrosis or adipose tissues, which strongly correlated with pathologic findings. In thyroid cancer metastasis, increased relative abundances of ceramides and glycerophosphoinisitols were observed. In breast cancer metastasis, increased relative abundances of various fatty acids and specific glycerophospholipids were seen. Trends in the alterations in fatty acyl chain composition of lipid species were also observed through detailed mass spectra evaluation and chemical identification of molecular species. The results obtained demonstrate DESI-MSI as a potential clinical tool for the detection of breast and thyroid cancer metastasis in lymph nodes, although further validation is needed.

  7. Visualisation of abscisic acid and 12-oxo-phytodienoic acid in immature Phaseolus vulgaris L. seeds using desorption electrospray ionisation-imaging mass spectrometry

    NASA Astrophysics Data System (ADS)

    Enomoto, Hirofumi; Sensu, Takuya; Sato, Kei; Sato, Futoshi; Paxton, Thanai; Yumoto, Emi; Miyamoto, Koji; Asahina, Masashi; Yokota, Takao; Yamane, Hisakazu

    2017-02-01

    The plant hormone abscisic acid (ABA) and the jasmonic acid related-compound 12-oxo-phytodienoic acid (OPDA) play crucial roles in seed development, dormancy, and germination. However, a lack of suitable techniques for visualising plant hormones has restricted the investigation of their biological mechanisms. In the present study, desorption electrospray ionisation-imaging mass spectrometry (DESI-IMS), a powerful tool for visualising metabolites in biological tissues, was used to visualise ABA and OPDA in immature Phaseolus vulgaris L. seed sections. The mass spectra, peak values and chemical formulae obtained from the analysis of seed sections were consistent with those determined for ABA and OPDA standards, as were the precursor and major fragment ions observed in tandem mass spectrometry (MS/MS) imaging. Furthermore, the precursor and fragment ion images showed similar distribution patterns. In addition, the localisation of ABA and OPDA using DESI-IMS was confirmed using liquid chromatography-MS/MS (LC-MS/MS). The results indicated that ABA was mainly distributed in the radical and cotyledon of the embryo, whereas OPDA was distributed exclusively in external structures, such as the hilum and seed coat. The present study is the first to report the visualisation of plant hormones using IMS, and demonstrates that DESI-IMS is a promising technique for future plant hormone research.

  8. Epithelial ovarian carcinoma diagnosis by desorption electrospray ionization mass spectrometry imaging

    PubMed Central

    Dória, Maria Luisa; McKenzie, James S.; Mroz, Anna; Phelps, David L.; Speller, Abigail; Rosini, Francesca; Strittmatter, Nicole; Golf, Ottmar; Veselkov, Kirill; Brown, Robert; Ghaem-Maghami, Sadaf; Takats, Zoltan

    2016-01-01

    Ovarian cancer is highly prevalent among European women, and is the leading cause of gynaecological cancer death. Current histopathological diagnoses of tumour severity are based on interpretation of, for example, immunohistochemical staining. Desorption electrospray mass spectrometry imaging (DESI-MSI) generates spatially resolved metabolic profiles of tissues and supports an objective investigation of tumour biology. In this study, various ovarian tissue types were analysed by DESI-MSI and co-registered with their corresponding haematoxylin and eosin (H&E) stained images. The mass spectral data reveal tissue type-dependent lipid profiles which are consistent across the n = 110 samples (n = 107 patients) used in this study. Multivariate statistical methods were used to classify samples and identify molecular features discriminating between tissue types. Three main groups of samples (epithelial ovarian carcinoma, borderline ovarian tumours, normal ovarian stroma) were compared as were the carcinoma histotypes (serous, endometrioid, clear cell). Classification rates >84% were achieved for all analyses, and variables differing statistically between groups were determined and putatively identified. The changes noted in various lipid types help to provide a context in terms of tumour biochemistry. The classification of unseen samples demonstrates the capability of DESI-MSI to characterise ovarian samples and to overcome existing limitations in classical histopathology. PMID:27976698

  9. Localization and quantification of drugs in animal tissues by use of desorption electrospray ionization mass spectrometry imaging.

    PubMed

    Vismeh, Ramin; Waldon, Daniel J; Teffera, Yohannes; Zhao, Zhiyang

    2012-06-19

    Mass spectrometric imaging (MSI) has emerged as a powerful technique to obtain spatial arrangement of individual molecular ions in animal tissues. Ambient desorption electrospray ionization (DESI) technique is uniquely suited for such imaging experiments, as it can be performed on animal tissues in their native environment without prior treatments. Although MSI has become a rapid growing technique for localization of proteins, lipids, drugs, and endogenous compounds in different tissues, quantification of imaged targets has not been explored extensively. Here we present a novel MSI approach for localization and quantification of drugs in animal thin tissue sections. DESI-MSI using an Orbitrap mass analyzer in full scan mode was performed on 6 μm coronal brain sections from rats that were administered 2.5 mg/kg clozapine. Clozapine was localized and quantified in individual brain sections 45 min postdose. External calibration curves were prepared by micropipetting standards with internal standard (IS) on top of the tissues, and average response factors were calculated for the scans in which both clozapine and IS were detected. All response factors were normalized to area units. Quantifications from DESI-MSI revealed 0.2-1.2 ng of clozapine in individual brain sections, results that were further confirmed by extraction and liquid chromatography/tandem mass spectrometry (LC/MS/MS) analysis.

  10. Anti-theft device staining on banknotes detected by mass spectrometry imaging.

    PubMed

    Correa, Deleon Nascimento; Zacca, Jorge Jardim; Rocha, Werickson Fortunato de Carvalho; Borges, Rodrigo; de Souza, Wanderley; Augusti, Rodinei; Eberlin, Marcos Nogueira; Vendramini, Pedro Henrique

    2016-03-01

    We describe the identification and limits of detection of ink staining by mass spectrometry imaging (MSI), as used in anti-theft devices (ATDs). Such ink staining is applied to banknotes during automated teller machine (ATM) explosions. Desorption electrospray ionization (DESI) coupled with high-resolution and high-accuracy orbitrap mass spectrometry (MS) and a moving stage device were applied to obtain 2D molecular images of the major dyes used for staining, that is, 1-methylaminoanthraquinone (MAAQ), rhodamine B (RB) and rhodamine 6G (R6G). MAAQ could not be detected because of its inefficient desorption by DESI from the banknote cellulose surface. By contrast, ATD staining on banknotes is perceptible by the human naked eye only at concentrations higher than 0.2 μg cm(-2), whereas both RB and R6G at concentrations 200 times lower (as low as 0.001 μg cm(-2)) could be easily detected and imaged by DESI-MSI, with selective and specific identification of each analyte and their spatial distribution on samples from suspects. This technique is non-destructive, and no sample preparation is required, which ensures sample preservation for further forensic investigations.

  11. Visualisation of abscisic acid and 12-oxo-phytodienoic acid in immature Phaseolus vulgaris L. seeds using desorption electrospray ionisation-imaging mass spectrometry

    PubMed Central

    Enomoto, Hirofumi; Sensu, Takuya; Sato, Kei; Sato, Futoshi; Paxton, Thanai; Yumoto, Emi; Miyamoto, Koji; Asahina, Masashi; Yokota, Takao; Yamane, Hisakazu

    2017-01-01

    The plant hormone abscisic acid (ABA) and the jasmonic acid related-compound 12-oxo-phytodienoic acid (OPDA) play crucial roles in seed development, dormancy, and germination. However, a lack of suitable techniques for visualising plant hormones has restricted the investigation of their biological mechanisms. In the present study, desorption electrospray ionisation-imaging mass spectrometry (DESI-IMS), a powerful tool for visualising metabolites in biological tissues, was used to visualise ABA and OPDA in immature Phaseolus vulgaris L. seed sections. The mass spectra, peak values and chemical formulae obtained from the analysis of seed sections were consistent with those determined for ABA and OPDA standards, as were the precursor and major fragment ions observed in tandem mass spectrometry (MS/MS) imaging. Furthermore, the precursor and fragment ion images showed similar distribution patterns. In addition, the localisation of ABA and OPDA using DESI-IMS was confirmed using liquid chromatography-MS/MS (LC-MS/MS). The results indicated that ABA was mainly distributed in the radical and cotyledon of the embryo, whereas OPDA was distributed exclusively in external structures, such as the hilum and seed coat. The present study is the first to report the visualisation of plant hormones using IMS, and demonstrates that DESI-IMS is a promising technique for future plant hormone research. PMID:28211480

  12. Imaging Nicotine in Rat Brain Tissue by Use of Nanospray Desorption Electrospray Ionization Mass Spectrometry

    SciTech Connect

    Lanekoff, Ingela T.; Thomas, Mathew; Carson, James P.; Smith, Jordan N.; Timchalk, Charles; Laskin, Julia

    2013-01-15

    Imaging mass spectrometry offers simultaneous detection of drugs, drug metabolites and endogenous substances in a single experiment. This is important when evaluating effects of a drug on a complex organ system such as the brain, where there is a need to understand how regional drug distribution impacts function. Nicotine is an addictive drug and its action in the brain is of high interest. Here we use nanospray desorption electrospray ionization, nano-DESI, imaging to discover the localization of nicotine in rat brain tissue after in vivo administration of nicotine. Nano-DESI is a new ambient technique that enables spatially-resolved analysis of tissue samples without special sample pretreatment. We demonstrate high sensitivity of nano-DESI imaging that enables detection of only 0.7 fmole nicotine per pixel in the complex brain matrix. Furthermore, by adding deuterated nicotine to the solvent, we examined how matrix effects, ion suppression, and normalization affect the observed nicotine distribution. Finally, we provide preliminary results suggesting that nicotine localizes to the hippocampal substructure called dentate gyrus.

  13. Towards High-Resolution Tissue Imaging Using Nanospray Desorption Electrospray Ionization Mass Spectrometry Coupled to Shear Force Microscopy

    NASA Astrophysics Data System (ADS)

    Nguyen, Son N.; Sontag, Ryan L.; Carson, James P.; Corley, Richard A.; Ansong, Charles; Laskin, Julia

    2017-07-01

    Constant mode ambient mass spectrometry imaging (MSI) of tissue sections with high lateral resolution of better than 10 μm was performed by combining shear force microscopy with nanospray desorption electrospray ionization (nano-DESI). Shear force microscopy enabled precise control of the distance between the sample and nano-DESI probe during MSI experiments and provided information on sample topography. Proof-of-concept experiments were performed using lung and brain tissue sections representing spongy and dense tissues, respectively. Topography images obtained using shear force microscopy were comparable to the results obtained using contact profilometry over the same region of the tissue section. Variations in tissue height were found to be dependent on the tissue type and were in the range of 0-5 μm for lung tissue and 0-3 μm for brain tissue sections. Ion images of phospholipids obtained in this study are in good agreement with literature data. Normalization of nano-DESI MSI images to the signal of the internal standard added to the extraction solvent allowed us to construct high-resolution ion images free of matrix effects. [Figure not available: see fulltext.

  14. Matrix Effects in Biological Mass Spectrometry Imaging: Identification and Compensation

    SciTech Connect

    Lanekoff, Ingela T.; Stevens, Susan; Stenzel-Poore, Mary; Laskin, Julia

    2014-07-21

    Matrix effects in mass spectrometry imaging (MSI) may affect the observed molecular distribution in chemical and biological systems. In this study, we introduce an experimental approach that efficiently compensates for matrix effects in nanospray desorption electrospray ionization (nano-DESI) MSI without introducing any complexity into the experimental protocol. We demonstrate compensation for matrix effects in nano-DESI MSI of phosphatidylcholine (PC) in normal and ischemic mouse brain tissue by doping the nano-DESI solvent with PC standards. Specifically, we use mouse brain tissue of a middle cerebral artery occlusion (MCAO) stroke model with an ischemic region localized to one hemisphere of the brain. Due to similar suppression in ionization of endogenous PC molecules extracted from the tissue and PC standards added to the solvent, matrix effects are eliminated by normalizing the intensity of the sodium and potassium adducts of endogenous PC to the intensity of the corresponding adduct of the PC standard. This approach efficiently compensates for signal variations resulting from differences in the local concentrations of sodium and potassium in tissue sections and from the complexity of the extracted analyte mixture derived from local variations in molecular composition.

  15. Isomaltulose production via yeast surface display of sucrose isomerase from Enterobacter sp. FMB-1 on Saccharomyces cerevisiae.

    PubMed

    Lee, Gil-Yong; Jung, Jong-Hyun; Seo, Dong-Ho; Hansin, Jantra; Ha, Suk-Jin; Cha, Jaeho; Kim, Yong-Sung; Park, Cheon-Seok

    2011-10-01

    The gene encoding sucrose isomerase from Enterobacter sp. FMB-1 species (ESI) was displayed on the cell surface of Saccharomyces cerevisiae EBY100 using a glycosylphosphatidylinositol (GPI) anchor attachment signal sequence. Fluorescence activated cell sorting (FACS) analysis and immunofluorescence microscopy confirmed the localization of ESI on the yeast cell surface. The displayed ESI (dESI) was stable at a broad range of temperatures (35-55 °C) and pHs (pH 5-7) with optimal temperature and pH at 45 °C and pH 7.0, respectively. In addition, the thermostability of the dESI was significantly enhanced compared with the recombinant ESI expressed in Escherichia coli. Biotransformation of sucrose to isomaltulose was observed in various ranges of substrate concentrations (50-250 mM) with a 6.4-7.4% conversion yield. It suggested that the bioconversion of sucrose to isomaltulose can be successfully performed by the dESI on the surface of host S. cerevisiae.

  16. High density linkage mapping of genomic and transcriptomic SNPs for synteny analysis and anchoring the genome sequence of chickpea

    PubMed Central

    Gaur, Rashmi; Jeena, Ganga; Shah, Niraj; Gupta, Shefali; Pradhan, Seema; Tyagi, Akhilesh K; Jain, Mukesh; Chattopadhyay, Debasis; Bhatia, Sabhyata

    2015-01-01

    This study presents genome-wide discovery of SNPs through next generation sequencing of the genome of Cicer reticulatum. Mapping of the C. reticulatum sequenced reads onto the draft genome assembly of C. arietinum (desi chickpea) resulted in identification of 842,104 genomic SNPs which were utilized along with an additional 36,446 genic SNPs identified from transcriptome sequences of the aforementioned varieties. Two new chickpea Oligo Pool All (OPAs) each having 3,072 SNPs were designed and utilized for SNP genotyping of 129 Recombinant Inbred Lines (RILs). Using Illumina GoldenGate Technology genotyping data of 5,041 SNPs were generated and combined with the 1,673 marker data from previously published studies, to generate a high resolution linkage map. The map comprised of 6698 markers distributed on eight linkage groups spanning 1083.93 cM with an average inter-marker distance of 0.16 cM. Utility of the present map was demonstrated for improving the anchoring of the earlier reported draft genome sequence of desi chickpea by ~30% and that of kabuli chickpea by 18%. The genetic map reported in this study represents the most dense linkage map of chickpea , with the potential to facilitate efficient anchoring of the draft genome sequences of desi as well as kabuli chickpea varieties. PMID:26303721

  17. Towards a cosmological neutrino mass detection

    NASA Astrophysics Data System (ADS)

    Allison, R.; Caucal, P.; Calabrese, E.; Dunkley, J.; Louis, T.

    2015-12-01

    Future cosmological measurements should enable the sum of neutrino masses to be determined indirectly through their effects on the expansion rate of the Universe and the clustering of matter. We consider prospects for the gravitationally lensed cosmic microwave background (CMB) anisotropies and baryon acoustic oscillations (BAOs) in the galaxy distribution, examining how the projected uncertainty of ≈15 meV on the neutrino mass sum (a 4 σ detection of the minimal mass) might be reached over the next decade. The current 1 σ uncertainty of ≈103 meV (Planck-2015 +BAO -15 ) will be improved by upcoming "Stage-3" (S3) CMB experiments (S 3 +BAO -15 : 44 meV ), then upcoming BAO measurements (S 3 +DESI : 22 meV ), and planned next-generation "Stage 4" (S4) CMB experiments (S 4 +DESI : 15 - 19 meV , depending on angular range). An improved optical depth measurement is important: the projected neutrino mass uncertainty increases to 26 meV if S4 is limited to ℓ>20 and combined with current large-scale polarization data. Looking beyond Λ CDM , including curvature uncertainty increases the forecast mass error by ≈50 % for S 4 +DESI , and more than doubles the error with a two-parameter dark-energy equation of state. Complementary low-redshift probes including galaxy lensing will play a role in distinguishing between massive neutrinos and a departure from a w =-1 , flat geometry.

  18. Liquid-phase microextraction and desorption electrospray ionization mass spectrometry for identification and quantification of basic drugs in human urine.

    PubMed

    Thunig, Janina; Flø, Linda; Pedersen-Bjergaard, Stig; Hansen, Steen Honoré; Janfelt, Christian

    2012-01-30

    Hollow fibre liquid-phase microextraction (LPME) and desorption electrospray ionization mass spectrometry (DESI-MS) were evaluated for the identification and quantification of basic drugs in human urine samples. The selective extraction capabilities of three-phase LPME provided a significant reduction in the matrix effects otherwise observed in direct DESI-MS analysis of urine samples. Aqueous LPME extracts (in 10 mM HCl) were deposited on porous Teflon, dried at room temperature, and the dried spots were then analyzed directly with DESI-MS in full scan mode. Pethidine, diphenhydramine, nortriptyline, and methadone were used as model compounds for identification, and their limits of identification were determined to be 100, 25, 100, and 30 ng/mL, respectively. In a reliability test with 19 spiked urine samples, 100% of the positive samples containing the model drugs in concentrations at or above the limit of identification were identified. Diphenhydramine was used as a model compound for quantitative analysis with diphenhydramine-d(5) as an internal standard. The calibration curve was linear in the range 50-2000 ng/mL (R(2) = 0.992) with a limit of quantification at approximately 140 ng/mL. The intra- and inter-day relative standard deviations were <9.5%. In a reliability test with six spiked urine samples, deviations between the measured and the true values for diphenhydramine were in the range 0.2-22.9%. Copyright © 2011 John Wiley & Sons, Ltd.

  19. Ambient Ionization and FAIMS Mass Spectrometry for Enhanced Imaging of Multiply Charged Molecular Ions in Biological Tissues

    PubMed Central

    Feider, Clara L.; Elizondo, Natalia

    2017-01-01

    Ambient ionization mass spectrometry imaging (MSI) has been increasingly used to investigate the molecular distribution of biological tissue samples. Here, we report the integration and optimization of desorption electrospray ionization (DESI) and liquid-microjunction surface sampling probe (LMJ-SSP) with a chip-based high-field asymmetric waveform ion mobility spectrometry (FAIMS) device to image metabolites, lipids, and proteins in biological tissue samples. Optimized FAIMS parameters for specific molecular classes enabled semitargeted detection of multiply charged molecular species at enhanced signal-to-noise ratios (S/N), improved visualization of spatial distributions, and, most importantly, allowed detection of species which were unseen by ambient ionization MSI alone. Under static DESI-FAIMS conditions selected for transmission of doubly charged cardiolipins (CL), for example, detection of 71 different CL species was achieved in rat brain, 23 of which were not observed by DESI alone. Diagnostic CL were imaged in a human thyroid tumor sample with reduced interference of isobaric species. LMJ-SSP-FAIMS enabled detection of 84 multiply charged protein ions in rat brain tissue, 66 of which were exclusive to this approach. Spatial visualization of proteins in substructures of rat brain, and in human ovarian cancerous, necrotic, and normal tissues was achieved. Our results indicate that integration of FAIMS with ambient ionization MS allows improved detection and imaging of selected molecular species. We show that this methodology is valuable in biomedical applications of MSI for detection of multiply charged lipids and proteins from biological tissues. PMID:27782388

  20. HERA Data Preservation plans and activities

    NASA Astrophysics Data System (ADS)

    Szuba, J.; DESY Data Preservation Group

    2011-12-01

    An international inter-experimental study group on data preservation and long-term analysis in HEP (DPHEP) was convened at the end of 2008 and held a series of workshops during 2009. The HERA experiments H1, ZEUS, HERMES as well as the IT division and the Library are well represented in DPHEP and efforts are now being made to form a coherent approach at DESY. Various options for preservation are explored, from permanent evolution (H1) to the use of virtualisation techniques (ZEUS). Both experiments have planned the computing and the associated resources until 2013 and now explore possibilities to ensure the maintenance of the data analysis capabilities beyond 2013. A common effort and additional resources may lead to longer viability of data analysis. Technical solutions have been investigated by DESY-IT and involve virtualisation systems tailored for long term software preservation as well as systems for self consistent data archiving and migration. The communication between experiments, DESY-IT and the Library have put forward the possibility for further common developments related to documentation scanning and storage as well as pilot projects within the HEP documentation system INSPIRE. The evaluation of such projects is ongoing and concrete proposals to ensure HERA data analysis after 2013 are expected in 2010.

  1. Analysis of sexual assault evidence: statistical classification of condoms by ambient mass spectrometry.

    PubMed

    Mirabelli, Mario F; Ifa, Demian R; Sindona, Giovanni; Tagarelli, Antonio

    2015-05-01

    Desorption electrospray ionization mass spectrometry (DESI-MS) and easy ambient sonic-spray ionization mass spectrometry (EASI-MS) are employed here in the forensic analysis of chemical compounds found in condoms and relative traces, and their analytical performances are compared. Statistical analysis of data obtained from mass spectra only was applied in order to obtain classification rules for distinguishing ten types of condoms. In particular, two supervised chemometric techniques [linear discriminant analysis (LDA) and soft independent modeling of class analogy (SIMCA)] were carried out on absolute and relative intensity values to test the performances of statistical models in terms of predictive capacity. The achieved classification of samples was excellent because of the high prediction percentages of the method used both for DESI and EASI mass spectrometry analyses, confirming these two as potential ambient ionization techniques for forensic analyses in case of sexual assault crimes. EASI-MS showed 99% prediction ability for LDA using relative data and 100% prediction ability for SIMCA using both absolute and relative ones, while DESI showed 94% prediction ability for both LDA and SIMCA. The absence of any sample preparation technique gives advantages in terms of sample preservation and reduced contamination, allowing successive analyses to be performed on the same sample by other techniques.

  2. Ambient Ionization and FAIMS Mass Spectrometry for Enhanced Imaging of Multiply Charged Molecular Ions in Biological Tissues.

    PubMed

    Feider, Clara L; Elizondo, Natalia; Eberlin, Livia S

    2016-12-06

    Ambient ionization mass spectrometry imaging (MSI) has been increasingly used to investigate the molecular distribution of biological tissue samples. Here, we report the integration and optimization of desorption electrospray ionization (DESI) and liquid-microjunction surface sampling probe (LMJ-SSP) with a chip-based high-field asymmetric waveform ion mobility spectrometry (FAIMS) device to image metabolites, lipids, and proteins in biological tissue samples. Optimized FAIMS parameters for specific molecular classes enabled semitargeted detection of multiply charged molecular species at enhanced signal-to-noise ratios (S/N), improved visualization of spatial distributions, and, most importantly, allowed detection of species which were unseen by ambient ionization MSI alone. Under static DESI-FAIMS conditions selected for transmission of doubly charged cardiolipins (CL), for example, detection of 71 different CL species was achieved in rat brain, 23 of which were not observed by DESI alone. Diagnostic CL were imaged in a human thyroid tumor sample with reduced interference of isobaric species. LMJ-SSP-FAIMS enabled detection of 84 multiply charged protein ions in rat brain tissue, 66 of which were exclusive to this approach. Spatial visualization of proteins in substructures of rat brain, and in human ovarian cancerous, necrotic, and normal tissues was achieved. Our results indicate that integration of FAIMS with ambient ionization MS allows improved detection and imaging of selected molecular species. We show that this methodology is valuable in biomedical applications of MSI for detection of multiply charged lipids and proteins from biological tissues.

  3. Desorption electrospray ionization-based imaging of interaction between vascular graft and human body.

    PubMed

    Bodzon-Kulakowska, Anna; Drabik, Anna; Mystkowska, Joanna; Chlabicz, Michal; Gacko, Marek; Dabrowski, Jan R; Mielczarek, Przemyslaw; Silberring, Jerzy; Suder, Piotr

    2016-01-01

    The desorption electrospray ionization-mass spectrometry imaging (DESI-MSI) is known as a fast and convenient MS-based method for lipid imaging in various biological materials. Here, we applied this technique to visualize lipid distribution in a vascular graft removed from a patient's body. This is a good example of the DESI system capabilities toward imaging of interaction between artificial material and living tissues. Detailed analysis allowed for visualization of the spatial distribution of selected lipids in this implanted, artificial material. Not only DESI-MSI allowed visualization of lipid distribution in the investigated material but also enabled identification of the detected molecular species using MS/MS. Here, this technique was successfully used to evaluate the saturation and spatial distribution of endogenous lipids in the artificial vascular graft. Unambiguous identification of the lipids was done with the aid of fragmentation procedure. We also showed that various lipids localize preferably in graft material or internal plaque existing inside the graft. © 2015 Wiley Periodicals, Inc.

  4. Production of superconducting 1.3-GHz cavities for the European X-ray Free Electron Laser

    NASA Astrophysics Data System (ADS)

    Singer, W.; Brinkmann, A.; Brinkmann, R.; Iversen, J.; Matheisen, A.; Moeller, W.-D.; Navitski, A.; Reschke, D.; Schaffran, J.; Sulimov, A.; Walker, N.; Weise, H.; Michelato, P.; Monaco, L.; Pagani, C.; Wiencek, M.

    2016-09-01

    The production of over 800 1.3-GHz superconducting (SC) cavities for the European X-ray Free Electron Laser (EXFEL), the largest in the history of cavity fabrication, has now been successfully completed. In the past, manufacturing of SC resonators was only partly industrialized; the main challenge for the EXFEL production was transferring the high-performance surface treatment to industry. The production was shared by the two companies RI Research Instruments GmbH (RI) and Ettore Zanon S.p.A. (EZ) on the principle of "build to print". DESY provided the high-purity niobium and NbTi for the resonators. Conformity with the European Pressure Equipment Directive (PED) was developed together with the contracted notified body TUEV NORD. New or upgraded infrastructure has been established at both companies. Series production and delivery of fully-equipped cavities ready for cold rf testing was started in December 2012, and finished in December 2015. More than half the cavities delivered to DESY as specified (referred to "as received") fulfilled the EXFEL specification. Further improvement of low-performing cavities was achieved by supplementary surface treatment at DESY or at the companies. The final achieved average gradient exceeded the EXFEL specification by approximately 25%. In the following paper, experience with the 1.3-GHz cavity production for EXFEL is reported and the main lessons learned are discussed.

  5. High density linkage mapping of genomic and transcriptomic SNPs for synteny analysis and anchoring the genome sequence of chickpea.

    PubMed

    Gaur, Rashmi; Jeena, Ganga; Shah, Niraj; Gupta, Shefali; Pradhan, Seema; Tyagi, Akhilesh K; Jain, Mukesh; Chattopadhyay, Debasis; Bhatia, Sabhyata

    2015-08-25

    This study presents genome-wide discovery of SNPs through next generation sequencing of the genome of Cicer reticulatum. Mapping of the C. reticulatum sequenced reads onto the draft genome assembly of C. arietinum (desi chickpea) resulted in identification of 842,104 genomic SNPs which were utilized along with an additional 36,446 genic SNPs identified from transcriptome sequences of the aforementioned varieties. Two new chickpea Oligo Pool All (OPAs) each having 3,072 SNPs were designed and utilized for SNP genotyping of 129 Recombinant Inbred Lines (RILs). Using Illumina GoldenGate Technology genotyping data of 5,041 SNPs were generated and combined with the 1,673 marker data from previously published studies, to generate a high resolution linkage map. The map comprised of 6698 markers distributed on eight linkage groups spanning 1083.93 cM with an average inter-marker distance of 0.16 cM. Utility of the present map was demonstrated for improving the anchoring of the earlier reported draft genome sequence of desi chickpea by ~30% and that of kabuli chickpea by 18%. The genetic map reported in this study represents the most dense linkage map of chickpea , with the potential to facilitate efficient anchoring of the draft genome sequences of desi as well as kabuli chickpea varieties.

  6. Genome-Wide Scans for Delineation of Candidate Genes Regulating Seed-Protein Content in Chickpea

    PubMed Central

    Upadhyaya, Hari D.; Bajaj, Deepak; Narnoliya, Laxmi; Das, Shouvik; Kumar, Vinod; Gowda, C. L. L.; Sharma, Shivali; Tyagi, Akhilesh K.; Parida, Swarup K.

    2016-01-01

    Identification of potential genes/alleles governing complex seed-protein content (SPC) is essential in marker-assisted breeding for quality trait improvement of chickpea. Henceforth, the present study utilized an integrated genomics-assisted breeding strategy encompassing trait association analysis, selective genotyping in traditional bi-parental mapping population and differential expression profiling for the first-time to understand the complex genetic architecture of quantitative SPC trait in chickpea. For GWAS (genome-wide association study), high-throughput genotyping information of 16376 genome-based SNPs (single nucleotide polymorphism) discovered from a structured population of 336 sequenced desi and kabuli accessions [with 150–200 kb LD (linkage disequilibrium) decay] was utilized. This led to identification of seven most effective genomic loci (genes) associated [10–20% with 41% combined PVE (phenotypic variation explained)] with SPC trait in chickpea. Regardless of the diverse desi and kabuli genetic backgrounds, a comparable level of association potential of the identified seven genomic loci with SPC trait was observed. Five SPC-associated genes were validated successfully in parental accessions and homozygous individuals of an intra-specific desi RIL (recombinant inbred line) mapping population (ICC 12299 × ICC 4958) by selective genotyping. The seed-specific expression, including differential up-regulation (>four fold) of six SPC-associated genes particularly in accessions, parents and homozygous individuals of the aforementioned mapping population with a high level of contrasting SPC (21–22%) was evident. Collectively, the integrated genomic approach delineated diverse naturally occurring novel functional SNP allelic variants in six potential candidate genes regulating SPC trait in chickpea. Of these, a non-synonymous SNP allele-carrying zinc finger transcription factor gene exhibiting strong association with SPC trait was found to be the most

  7. A Genome-wide Combinatorial Strategy Dissects Complex Genetic Architecture of Seed Coat Color in Chickpea

    PubMed Central

    Bajaj, Deepak; Das, Shouvik; Upadhyaya, Hari D.; Ranjan, Rajeev; Badoni, Saurabh; Kumar, Vinod; Tripathi, Shailesh; Gowda, C. L. Laxmipathi; Sharma, Shivali; Singh, Sube; Tyagi, Akhilesh K.; Parida, Swarup K.

    2015-01-01

    The study identified 9045 high-quality SNPs employing both genome-wide GBS- and candidate gene-based SNP genotyping assays in 172, including 93 cultivated (desi and kabuli) and 79 wild chickpea accessions. The GWAS in a structured population of 93 sequenced accessions detected 15 major genomic loci exhibiting significant association with seed coat color. Five seed color-associated major genomic loci underlying robust QTLs mapped on a high-density intra-specific genetic linkage map were validated by QTL mapping. The integration of association and QTL mapping with gene haplotype-specific LD mapping and transcript profiling identified novel allelic variants (non-synonymous SNPs) and haplotypes in a MATE secondary transporter gene regulating light/yellow brown and beige seed coat color differentiation in chickpea. The down-regulation and decreased transcript expression of beige seed coat color-associated MATE gene haplotype was correlated with reduced proanthocyanidins accumulation in the mature seed coats of beige than light/yellow brown seed colored desi and kabuli accessions for their coloration/pigmentation. This seed color-regulating MATE gene revealed strong purifying selection pressure primarily in LB/YB seed colored desi and wild Cicer reticulatum accessions compared with the BE seed colored kabuli accessions. The functionally relevant molecular tags identified have potential to decipher the complex transcriptional regulatory gene function of seed coat coloration and for understanding the selective sweep-based seed color trait evolutionary pattern in cultivated and wild accessions during chickpea domestication. The genome-wide integrated approach employed will expedite marker-assisted genetic enhancement for developing cultivars with desirable seed coat color types in chickpea. PMID:26635822

  8. Detection and imaging of thermochromic ink compounds in erasable pens using desorption electrospray ionization mass spectrometry.

    PubMed

    Khatami, Amin; Prova, Shamina S; Bagga, Aafreen K; Yan Chi Ting, Michelle; Brar, Gurnoor; Ifa, Demian R

    2017-06-30

    Thermochromic ink pens are widely accessible worldwide and have gained popularity among the general public. These pens are very useful to undo mistakes while writing important documents or exams. They are also, however, misused in committing crimes such as counterfeiting checks or wills. Thus, the forensics community is in need of techniques that will allow these forgeries to be detected rapidly, reliably and conveniently. Thermochromic ink compounds were investigated using Desorption Electrospray Ionization (DESI) coupled with an LTQ mass spectrometer and Thin-Layer Chromatography (TLC). Tandem mass spectrometric analysis was conducted using Electrospray Ionization (ESI) coupled with an Orbitrap LTQ mass spectrometer performing Collision-Induced Dissociation (CID) for identification of ink traces. Chemical marker ions characteristic of the state of ink (visible or invisible) were identified and mapped in ink traces by the use of DESI-MS imaging. These ions can be employed by forensic experts as fingerprint markers in forged documents. The marker ions were also characterised by conducting tandem mass spectrometry using paper spray in an Orbitrap LTQ mass spectrometer. Specific chemical components yielding ions of m/z 400, 405, 615 and 786 were distinguished as only being apparent in the invisible and reappeared state of the ink. The absence of these compounds in the original state of the ink enabled their recognition as useful chemical determinants in detecting forgery. DESI-MSI was thus shown to be a very useful, convenient and reliable technique for detecting forgery in paper documents due to its fast and reproducible mode of analysis, with no sample preparation and minimal damage to the document under investigation. Copyright © 2017 John Wiley & Sons, Ltd. Copyright © 2017 John Wiley & Sons, Ltd.

  9. Flame Design: A Novel Approach Developed to Produce Clean, Efficient Diffusion Flames

    NASA Technical Reports Server (NTRS)

    Axelbaum, Richard L.; Urban, David L.; Sunderland, Peter B.; Chao, Beei-Huan

    2000-01-01

    Soot formation and flame extinction are vital concerns in the combustion of fossil fuels. In particular, soot is responsible for pollutant emissions, and extinction can cause inefficient or unstable burning. Normal-gravity experiments have demonstrated that flames can be designed to improve both characteristics by redirecting some or all of the nitrogen from the oxidizer into the fuel. Such nitrogen exchange can produce permanently blue flames, which are soot free under all possible flame conditions. Furthermore, this approach can lead to stronger, extinction-resistant flames. Past investigations of nitrogen exchange were unable to identify the physical mechanisms responsible for its benefits because these mechanisms cannot be isolated when normal-gravity flames are studied. In contrast, the Diffusion Flame Extinction and Soot Inception (DESI) experiment considers spherical flames, where nearly perfect spherical symmetry affords new levels of control. Because of buoyancy, spherical flames cannot be created in Earth s gravity. DESI was conceived by principal investigator Professor R.L. Axelbaum of Washington University in St. Louis. Tests to date have utilized the 2.2-Second Drop Tower at the NASA Glenn Research Center at Lewis Field. The experiment is slated for testing aboard the International Space Station in a few years. Two mechanisms have been proposed to explain the connection between nitrogen exchange and permanently blue flames. These are the structure (chemical effects) and hydrodynamics (flow direction and speed). In normal-gravity flames, the structure and hydrodynamics are coupled, since nitrogen exchange simultaneously modifies both. Spherical microgravity flames, on the other hand, allow independent control of these factors. Specifically, structure can be modified via nitrogen exchange, and flow direction can be reversed by swapping the ambient and burner-feed gases. In DESI, these variations can be accomplished without changing the theoretical flame

  10. Automated platform for high-resolution tissue imaging using nanospray desorption electrospray ionization mass spectrometry.

    PubMed

    Lanekoff, Ingela; Heath, Brandi S; Liyu, Andrey; Thomas, Mathew; Carson, James P; Laskin, Julia

    2012-10-02

    An automated platform has been developed for acquisition and visualization of mass spectrometry imaging (MSI) data using nanospray desorption electrospray ionization (nano-DESI). The new system enables robust operation of the nano-DESI imaging source over many hours by precisely controlling the distance between the sample and the nano-DESI probe. This is achieved by mounting the sample holder onto an automated XYZ stage, defining the tilt of the sample plane, and recalculating the vertical position of the stage at each point. This approach is useful for imaging of relatively flat samples such as thin tissue sections. Custom software called MSI QuickView was developed for visualization of large data sets generated in imaging experiments. MSI QuickView enables fast visualization of the imaging data during data acquisition and detailed processing after the entire image is acquired. The performance of the system is demonstrated by imaging rat brain tissue sections. Low background noise enables simultaneous detection of lipids and metabolites in the tissue section. High-resolution mass analysis combined with tandem mass spectometry (MS/MS) experiments enabled identification of the observed species. In addition, the high dynamic range (>2000) of the technique allowed us to generate ion images of low-abundance isobaric lipids. A high-spatial resolution image was acquired over a small region of the tissue section revealing the distribution of an abundant brain metabolite, creatine, on the boundary between the white and gray matter. The observed distribution is consistent with the literature data obtained using magnetic resonance spectroscopy.

  11. IGCC repowering project clean coal II project public design report. Annual report, October 1992--September 1993

    SciTech Connect

    1993-10-01

    Combustion Engineering, Inc. (CE) is participating in a $270 million coal gasification combined cycle repowering project that was designed to provide a nominal 60 MW of electricity to City, Water, Light and Power (CWL&P) in Springfield, Illinois. The Integrated Gasification Combined Cycle (IGCC) system consists of CE`s air-blown entrained flow two-stage gasifier; an advanced hot gas cleanup system; a combustion turbine adapted to use low-BTU gas; and all necessary coal handling equipment, The project is currently completing the second budget period of five. The major activities to date are: (1) Establishment of a design, cost, and schedule for the project; (2) Establishment of financial commitments; (3) Acquire design and modeling data; (4) Establishment of an approved for design (AFD) engineering package; (5) Development of a detailed cost estimate; (6) Resolution of project business issues; (7) CWL&P renewal and replacement activities; and (8) Application for environmental air permits. A Project Management Plan was generated, The conceptual design of the plant was completed and a cost and schedule baseline for the project was established in Budget Period One. This information was used to establish AFD Process Flow Diagrams, Piping and Instrument Diagrams, Equipment Data Sheets, material take offs, site modification plans and other information necessary to develop a plus or minus 20% cost estimate. Environmental permitting activities were accomplished, including the Air Permit Application, completion of the National Environmental Policy Act process, and the draft Environmental Monitoring Plan. At the end of 1992 the DOE requested that Duke Engineering and Services Inc., (DESI) be used to complete the balance of plant cost estimate. DESI was retained to do this work, DESI completed the material take off estimate and included operations, maintenance, and startup in the estimate.

  12. Ultra-high density intra-specific genetic linkage maps accelerate identification of functionally relevant molecular tags governing important agronomic traits in chickpea

    PubMed Central

    Kujur, Alice; Upadhyaya, Hari D.; Shree, Tanima; Bajaj, Deepak; Das, Shouvik; Saxena, Maneesha S.; Badoni, Saurabh; Kumar, Vinod; Tripathi, Shailesh; Gowda, C. L. L.; Sharma, Shivali; Singh, Sube; Tyagi, Akhilesh K.; Parida, Swarup K.

    2015-01-01

    We discovered 26785 and 16573 high-quality SNPs differentiating two parental genotypes of a RIL mapping population using reference desi and kabuli genome-based GBS assay. Of these, 3625 and 2177 SNPs have been integrated into eight desi and kabuli chromosomes, respectively in order to construct ultra-high density (0.20–0.37 cM) intra-specific chickpea genetic linkage maps. One of these constructed high-resolution genetic map has potential to identify 33 major genomic regions harbouring 35 robust QTLs (PVE: 17.9–39.7%) associated with three agronomic traits, which were mapped within <1 cM mean marker intervals on desi chromosomes. The extended LD (linkage disequilibrium) decay (~15 cM) in chromosomes of genetic maps have encouraged us to use a rapid integrated approach (comparative QTL mapping, QTL-region specific haplotype/LD-based trait association analysis, expression profiling and gene haplotype-based association mapping) rather than a traditional QTL map-based cloning method to narrow-down one major seed weight (SW) robust QTL region. It delineated favourable natural allelic variants and superior haplotype-containing one seed-specific candidate embryo defective gene regulating SW in chickpea. The ultra-high-resolution genetic maps, QTLs/genes and alleles/haplotypes-related genomic information generated and integrated strategy for rapid QTL/gene identification developed have potential to expedite genomics-assisted breeding applications in crop plants, including chickpea for their genetic enhancement. PMID:25942004

  13. Gain length dependence on phase shake in the VUV-FEL at the TESLA Test Facility

    SciTech Connect

    Pflueger, J.; Pierini, P.

    1995-12-31

    The TTF VUV FEL, which is in its design stage at DESY, consists of a 30 m long SASE FEL which will radiate around 6 nm, driven by a superconducting linac with final energy of 1 GeV. One of the important issues in its design is the undulator performance, which is studied in this paper. The present setup, including FODO lattice, is discussed in this paper. Results of simulations, including the realistic wiggler field errors and beam stearing, are presented. Dependence of the performance, in particular the gain and saturation length as well as the saturation peak power, on the wiggler field errors is discussed.

  14. COMPILATION OF CURRENT HIGH ENERGY PHYSICS EXPERIMENTS

    SciTech Connect

    Wohl, C.G.; Kelly, R.L.; Armstrong, F.E.; Horne, C.P.; Hutchinson, M.S.; Rittenberg, A.; Trippe, T.G.; Yost, G.P.; Addis, L.; Ward, C.E.W.; Baggett, N.; Goldschmidt-Clermong, Y.; Joos, P.; Gelfand, N.; Oyanagi, Y.; Grudtsin, S.N.; Ryabov, Yu.G.

    1981-05-01

    This is the fourth edition of our compilation of current high energy physics experiments. It is a collaborative effort of the Berkeley Particle Data Group, the SLAC library, and nine participating laboratories: Argonne (ANL), Brookhaven (BNL), CERN, DESY, Fermilab (FNAL), the Institute for Nuclear Study, Tokyo (INS), KEK, Serpukhov (SERP), and SLAC. The compilation includes summaries of all high energy physics experiments at the above laboratories that (1) were approved (and not subsequently withdrawn) before about April 1981, and (2) had not completed taking of data by 1 January 1977. We emphasize that only approved experiments are included.

  15. Compilation of current high-energy-physics experiments

    SciTech Connect

    Wohl, C.G.; Kelly, R.L.; Armstrong, F.E.

    1980-04-01

    This is the third edition of a compilation of current high energy physics experiments. It is a collaborative effort of the Berkeley Particle Data Group, the SLAC library, and ten participating laboratories: Argonne (ANL), Brookhaven (BNL), CERN, DESY, Fermilab (FNAL), the Institute for Nuclear Study, Tokyo (INS), KEK, Rutherford (RHEL), Serpukhov (SERP), and SLAC. The compilation includes summaries of all high energy physics experiments at the above laboratories that (1) were approved (and not subsequently withdrawn) before about January 1980, and (2) had not completed taking of data by 1 January 1976.

  16. Development of a New Silicon Drift Detector Module

    NASA Astrophysics Data System (ADS)

    Welter, Edmund; Hansen, Karsten

    2007-02-01

    A novel 7 cell Silicon Drift Detector (SDD) module for X-Ray Absorption Fine Structure Spectroscopy (XAFS) and similar methods is developed at the Hamburger Synchrotron Strahlungslabor at Deutsches Elektronen Synchrotron. The monolithic 7 cell SDD detector chips were delivered by PN Sensors (Munich, Germany). Each cell has an active area of 7 mm2. In this paper we report results from the spatially resolved spectroscopic characterization of the SDD and their consequences for the final design of the complete detector modules. A specialized read out chip is currently developed at DESY and will make it possible to achieve a maximum count rate of 600 Kcps/detector cell.

  17. Small Portable Analyzer Diagnostic Equipment (SPADE) - Advance Development Prototype Report.

    DTIC Science & Technology

    1979-09-01

    47 gearboxes in test cells, gave promising results. These results showed. the potential for desiRninR an automated instru- ment that would be both...circuit design refinements and testing on the BTF in the laboratory, on a UH-l 42* gearbox in a test cell, on a UH-l aircraft at Scott AFB, and on both UH...when conservatively evaluated, indicate that for a 25 flight hour usage interval, the SPADE cumulative probability of fault detection is 941 and would

  18. PWA prospects for K+Lambda and K+Sigma^0 photoproduction

    SciTech Connect

    Biplab Dey, Michael E. McCracken, Curtis A. Meyer

    2012-04-01

    We present a status update on the CMU group PWA efforts in the strangeness (K{sup +}{Lambda}/K{sup +}{Sigma}{sup 0}) sector. The bulk of the currently available data comes from recently published CLAS g11a results, with extensive polarization data expected soon from the CLAS g8 and g9 set of experiments. We give a brief description of issues pertaining to different sign conventions for the polarization observables in the literature, and normalization discrepancies between the CLAS-g11a results and older high energy data from SLAC/CEA/DESY that used an untagged photon beam.

  19. Current experiments in particle physics - particle data group

    SciTech Connect

    Galic, H.; Lehar, F.; Kettle, P.R.

    1996-09-01

    This report contains summaries of current and recent experiments in Particle Physics. Included are experiments at BEPC (Beijing), BNL, CEBAF, CERN, CESR, DESY, FNAL, Frascati, ITEP (Moscow), JINR (Dubna), KEK, LAMPF, Novosibirsk, PNPI (St. Petersburg), PSI, Saclay, Serpukhov, SLAC, and TRIUMF, and also several proton decay and solar neutrino experiments. Excluded are experiments that finished taking data before 1991. Instructions are given for the World Wide Web (WWW) searching of the computer database (maintained under the SLAC-SPIRES system) that contains the summaries.

  20. Genetic structure, diversity, and allelic richness in composite collection and reference set in chickpea (Cicer arietinum L.)

    PubMed Central

    Upadhyaya, Hari D; Dwivedi, Sangam L; Baum, Michael; Varshney, Rajeev K; Udupa, Sripada M; Gowda, Cholenahalli LL; Hoisington, David; Singh, Sube

    2008-01-01

    Background Plant genetic resources (PGR) are the basic raw materials for future genetic progress and an insurance against unforeseen threats to agricultural production. An extensive characterization of PGR provides an opportunity to dissect structure, mine allelic variations, and identify diverse accessions for crop improvement. The Generation Challenge Program conceptualized the development of "composite collections" and extraction of "reference sets" from these for more efficient tapping of global crop-related genetic resources. In this study, we report the genetic structure, diversity and allelic richness in a composite collection of chickpea using SSR markers, and formation of a reference set of 300 accessions. Results The 48 SSR markers detected 1683 alleles in 2915 accessions, of which, 935 were considered rare, 720 common and 28 most frequent. The alleles per locus ranged from 14 to 67, averaged 35, and the polymorphic information content was from 0.467 to 0.974, averaged 0.854. Marker polymorphism varied between groups of accessions in the composite collection and reference set. A number of group-specific alleles were detected: 104 in Kabuli, 297 in desi, and 69 in wild Cicer; 114 each in Mediterranean and West Asia (WA), 117 in South and South East Asia (SSEA), and 10 in African region accessions. Desi and kabuli shared 436 alleles, while wild Cicer shared 17 and 16 alleles with desi and kabuli, respectively. The accessions from SSEA and WA shared 74 alleles, while those from Mediterranean 38 and 33 alleles with WA and SSEA, respectively. Desi chickpea contained a higher proportion of rare alleles (53%) than kabuli (46%), while wild Cicer accessions were devoid of rare alleles. A genotype-based reference set captured 1315 (78%) of the 1683 composite collection alleles of which 463 were rare, 826 common, and 26 the most frequent alleles. The neighbour-joining tree diagram of this reference set represents diversity from all directions of the tree diagram of

  1. USE OF ACOUSTIC EMISSION TO DIAGNOSE BREAKDOWN IN ACCELERATOR RF STRUCTURES

    SciTech Connect

    Nelson, Janice L.

    2003-05-12

    Accelerator structures of a wide variety have been damaged by RF breakdowns. Very little is known about the mechanisms that cause the breakdown and the damage although there has been theoretical work [1,2]. Using an array of ultrasonic acoustic emission sensors we have been able to locate and classify breakdown events more accurately than possible using microwave techniques. Data from the technique has led to improvements in the design of the NLC X-band RF structure. We report results of acoustic emission studies at the DESY TESLA Test Facility and the SLAC NLC Test Accelerator.

  2. Beam Beam Simulation Studies for NLC And SLC2000

    SciTech Connect

    Thompson, K.A.; Chen, P.; Irwin, J.; Zimmermann, F.; /SLAC

    2010-05-27

    We apply and modify the computer codes CAIN(P.Chen, G.Horton-Smith, T.Ohgaki, A.W.Weidemann, K.Yokoya, contributed to Workshop on Gamma-Gamma Colliders, Berkeley, CA, March 28-31, 1994; SLAC-PUB-6583.) and GUINEAPIG(D.Schulte (DESY), unpublished.) to make detailed studies of the beam-beam interaction in the SLAC design for a future linear collider (NLC), as well as to the proposed SLC2000 project. Using realistic beam distributions, we present simulations related to the tuning and optimization of luminosity in SLC2000 and NLC.

  3. Performance of 3.9 GHz SRF cavities at Fermilab's ILCTA_MDB nhorizontal test stand

    SciTech Connect

    Harms, Elvin; Hocker, Andy; /Fermilab

    2008-08-01

    Fermilab is building a cryomodule containing four 3.9 GHz superconducting radio frequency (SRF) cavities for the Free electron LASer in Hamburg (FLASH) facility at the Deutsches Elektronen-SYnchrotron (DESY) laboratory. Before assembling the cavities into the cryomodule, each individual cavity is tested at Fermilab's Horizontal Test Stand (HTS). The HTS provides the capability to test fully-dressed SRF cavities at 1.8 K with high-power pulsed RF in order to verify that the cavities achieve performance requirements under these conditions. The performance at the HTS of the 3.9 GHz cavities built for FLASH is presented here.

  4. Spray desorption collection: an alternative to swabbing for pharmaceutical cleaning validation.

    PubMed

    Jain, Shashank; Heiser, Amy; Venter, Andre R

    2011-04-07

    Spray Desorption Collection (SDC) allows for much larger areas of surfaces to be sampled compared to traditional swabbing techniques, providing a valuable pre-concentration advantage. Closely related to desorption electrospray ionization (DESI), analytes from the sample surface are collected onto a selected collection surface, which in a second step can be analyzed directly. Here we demonstrate the application of SDC as a large surface area sampling tool coupled with paper spray MS (PS-MS) and demonstrate its capabilities for cleaning validation of pharmaceutical equipment for both acidic and basic active ingredients from an aluminium surface.

  5. Pion in deep inelastic scattering

    SciTech Connect

    Povh, B.

    2008-10-13

    The forward neutron production in the ep collisions at 300 GeV measured by the H1 and ZEUS Collaborations at DESY has been used to estimate the total probability for the proton fluctuation into n{pi}{sup +} and p{pi}{sup 0}. The probability found is on the order of the 30%. This number is compared with the numbers of obtained for the probability of quark fluctuation into {pi}{sup +} from several alternative DIS processes (Gottfried sum rule, polarized structure function) and the axial-vector coupling constant, where the pion fluctuation is believed to play an important role.

  6. Diffractive hadroproduction of W{sup {+-}} and Z{sup 0} bosons at high energies

    SciTech Connect

    Ducati, M. B. Gay; Machado, M. M.; Machado, M. V. T.

    2008-10-13

    An analysis of W{sup {+-}} and Z{sup 0} hard diffractive hadroproduction at high energies is presented obtained using the simple assumption of Regge factorization and considering the recent diffractive parton density functions extracted by the H1 Collaboration at DESY-HERA. The corresponding multiple Pomeron exchange corrections to the single Pomeron one is considered by taking into account by a gap survival probability factor. It is shown that the ratio of diffractive to nondiffractive boson production is in good agreement with the Tevatron data. Estimations which are relevant for the incoming measurements at the LHC are discussed.

  7. Introductory Handbook for Small Arms Ammunition

    DTIC Science & Technology

    1967-07-01

    pec ific desi n . The f ollowing are examples of s tandard no- menclatur e : Item Cartridge Cartri d e Cartridge MM or Caliber 7. 62mm , NATO 5 ... 56mm Caliber . 30 6 . CARTRIDGE CASE Ball Ball Ball Model M80 Ml 93 M2 The cartridge case holds the primer, propellant 3 Sl’CTION II...CARTRIDGE IDENTIFICATION Figures 5 , 6, 7, 8, 9, 10 and 11 illustrate the various types of 7.62mm, 5.56mm, caliber .30, caliber .30 carbine

  8. FPGA based implementation of hardware diagnostic layer for local trigger of BAC calorimeter for ZEUS detector

    NASA Astrophysics Data System (ADS)

    Pozniak, Krzysztof T.

    2004-07-01

    The paper describes design and construction of hardware diagnostics layer dedicated to the local trigger of the Backing Calorimeter (BAC). The BAC is a part of the ZEUS experiment in DESY, Hamburg. A general characteristic of the hardware of BAC trigger was presented. The design of hardware diagnostic and calibration sub-systems for BAC trigger bases on the continuous monitoring of consecutive electronic and photonic blocks. The monitoring process is performed via the specialized tests. The standardized diagnostic components were realized in the algorithmic and parameterized description in AHDL. There were presented the implementation results in ALTERA ACEX chips.

  9. Towards tabletop production of intense quasimonochromatic X-ray beams using small 2-20 MeV accelerators

    NASA Astrophysics Data System (ADS)

    Avakian, Robert O.; Ispirian, Karo A.

    2005-08-01

    The existing synchrotron radiation sources and the fourth generation x-ray sources, which are projected at SLAC, USA, and DESY, Germany, are very expensive. For this reason the search for the novel and cheaper sources using various types of radiation produced by 2-20 MeV electrons available at many hospitals, universities and firms in various countries is of great interest. A review of the physics, history, new theoretical and experimental results and of some applications is given with a purpose to consider the possibilities of construction of small tabletop sources of quasimonochromatic X-ray photon beams necessary for scientific, industrial, medicine and other applications.

  10. A high-granularity plastic scintillator tile hadronic calorimeter with APD readout for a linear collider detector

    NASA Astrophysics Data System (ADS)

    Andreev, V.; Cvach, J.; Danilov, M.; Devitsin, E.; Dodonov, V.; Eigen, G.; Garutti, E.; Gilitzky, Yu.; Groll, M.; Heuer, R.-D.; Janata, M.; Kacl, I.; Korbel, V.; Kozlov, V.; Meyer, H.; Morgunov, V.; Němeček, S.; Pöschl, R.; Polák, I.; Raspereza, A.; Reiche, S.; Rusinov, V.; Sefkow, F.; Smirnov, P.; Terkulov, A.; Valkár, Š.; Weichert, J.; Zálešák, J.

    2006-08-01

    We report upon the performance of an analog hadron calorimeter prototype, where plastic scintillator tiles are read out with wavelength-shifting fibers coupled to avalanche photodiodes. This prototype configuration has been tested using a positron beam at DESY with energies between 1 and 6 GeV. We present different detector calibration methods, show measurements for noise, linearity, and energy resolution and discuss gain monitoring with an LED system. The results are in good agreement with our simulation studies and previous measurements using silicon photomultiplier readout.

  11. Applications of ambient mass spectrometry in high-throughput screening.

    PubMed

    Li, Li-Ping; Feng, Bao-Sheng; Yang, Jian-Wang; Chang, Cui-Lan; Bai, Yu; Liu, Hu-Wei

    2013-06-07

    The development of rapid screening and identification techniques is of great importance for drug discovery, doping control, forensic identification, food safety and quality control. Ambient mass spectrometry (AMS) allows rapid and direct analysis of various samples in open air with little sample preparation. Recently, its applications in high-throughput screening have been in rapid progress. During the past decade, various ambient ionization techniques have been developed and applied in high-throughput screening. This review discusses typical applications of AMS, including DESI (desorption electrospray ionization), DART (direct analysis in real time), EESI (extractive electrospray ionization), etc., in high-throughput screening (HTS).

  12. Current experiments in elementary particle physics

    SciTech Connect

    Wohl, C.G.; Armstrong, F.E.; Trippe, T.G.; Yost, G.P. ); Oyanagi, Y. ); Dodder, D.C. ); Ryabov, Yu.G.; Slabospitsky, S.R. . Inst. Fiziki Vysokikh Ehnergij); Frosch, R. (Swiss Inst. for Nuclear Research, Villigen (Switzerla

    1989-09-01

    This report contains summaries of 736 current and recent experiments in elementary particle physics (experiments that finished taking data before 1982 are excluded). Included are experiments at Brookhaven, CERN, CESR, DESY, Fermilab, Tokyo Institute of Nuclear Studies, Moscow Institute of Theoretical and Experimental Physics, Joint Institute for Nuclear Research (Dubna), KEK, LAMPF, Novosibirsk, PSI/SIN, Saclay, Serpukhov, SLAC, and TRIUMF, and also several underground experiments. Also given are instructions for searching online the computer database (maintained under the SLAC/SPIRES system) that contains the summaries. Properties of the fixed-target beams at most of the laboratories are summarized.

  13. Current experiments in elementary particle physics

    SciTech Connect

    Wohl, C.G.; Armstrong, F.E., Oyanagi, Y.; Dodder, D.C.; Ryabov, Yu.G.; Frosch, R.; Olin, A.; Lehar, F.; Moskalev, A.N.; Barkov, B.P.

    1987-03-01

    This report contains summaries of 720 recent and current experiments in elementary particle physics (experiments that finished taking data before 1980 are excluded). Included are experiments at Brookhaven, CERN, CESR, DESY, Fermilab, Moscow Institute of Theoretical and Experimental Physics, Tokyo Institute of Nuclear Studies, KEK, LAMPF, Leningrad Nuclear Physics Institute, Saclay, Serpukhov, SIN, SLAC, and TRIUMF, and also experiments on proton decay. Instructions are given for searching online the computer database (maintained under the SLAC/SPIRES system) that contains the summaries. Properties of the fixed-target beams at most of the laboratories are summarized.

  14. Compilation of current high-energy physics experiments

    SciTech Connect

    Wohl, C.G.; Kelly, R.L.; Armstrong, F.E.

    1981-05-01

    This is the fourth edition of the compilation of current high energy physics experiments. It is a collaborative effort of the Berkeley Particle Data Group, the SLAC library, and nine participating laboratories: Argonne (ANL), Brookhaven (BNL), CERN, DESY, Fermilab (FNAL), the Institute for Nuclear Study, Tokyo (INS), KEK, Serpukhov (SERP), and SLAC. The compilation includes summaries of all high energy physics experiments at the above laboratories that (1) were approved (and not subsequently withdrawn) before about April 1981, and (2) had not completed taking of data by 1 January 1977. Only approved experiments are included.

  15. Hadron Formation in DIS in a nuclear environment

    NASA Astrophysics Data System (ADS)

    Muccifora, Valeria

    2002-10-01

    The influence of the nuclear medium on the production of charged hadrons in semi-inclusive deep inelastic scattering has been studied by the HERMES experiment at DESY using 27.5 GeV positrons. A substantial reduction of the multiplicity of charged hadrons and identified charged pions from nuclei relative to that from deuterium has been measured as function of the relevant kinematic variables. The preliminary results on krypton show a larger reduction of the multiplicity ratio RMh with respect to the one previously measured on nitrogen and suggest a possible modification of the quark fragmentation process in the nuclear environment.

  16. Data acquisition system for the CALICE AHCAL calorimeter

    NASA Astrophysics Data System (ADS)

    Kvasnicka, J.

    2017-03-01

    The data acquisition system (DAQ) for a highly granular analogue hadron calorimeter (AHCAL) for the future International Linear Collider is presented. The developed DAQ chain has several stages of aggregation and scales up to 8 million channels foreseen for the AHCAL detector design. The largest aggregation device, Link Data Aggregator, has 96 HDMI connectors, four Kintex7 FPGAs and a central Zynq System-On-Chip. Architecture and performance results are shown in detail. Experience from DESY testbeams with a small detector prototype consisting of 15 detector layers are shown.

  17. PWA prospects for K+Λ and K+Σ0 photoproduction

    NASA Astrophysics Data System (ADS)

    Dey, Biplab; McCracken, Michael E.; Meyer, Curtis A.

    2012-04-01

    We present a status update on the CMU group PWA efforts in the strangeness (K+Λ/K+Σ0) sector. The bulk of the currently available data comes from recently published CLAS g11a results [1, 2], with extensive polarization data expected soon from the CLAS g8 and g9 set of experiments. We give a brief description of issues pertaining to different sign conventions for the polarization observables in the literature [3], and normalization discrepancies between the CLAS-g11a results and older high energy data from SLAC/CEA/DESY that used an untagged photon beam.

  18. Pancreatic Cancer Surgical Resection Margins: Molecular Assessment by Mass Spectrometry Imaging

    PubMed Central

    Eberlin, Livia S.; Zare, Richard N.; Tibshirani, Robert; Longacre, Teri A.; Jalali, Moe; Norton, Jeffrey A.; Poultsides, George A.

    2016-01-01

    Background Surgical resection with microscopically negative margins remains the main curative option for pancreatic cancer; however, in practice intraoperative delineation of resection margins is challenging. Ambient mass spectrometry imaging has emerged as a powerful technique for chemical imaging and real-time diagnosis of tissue samples. We applied an approach combining desorption electrospray ionization mass spectrometry imaging (DESI-MSI) with the least absolute shrinkage and selection operator (Lasso) statistical method to diagnose pancreatic tissue sections and prospectively evaluate surgical resection margins from pancreatic cancer surgery. Methods and Findings Our methodology was developed and tested using 63 banked pancreatic cancer samples and 65 samples (tumor and specimen margins) collected prospectively during 32 pancreatectomies from February 27, 2013, to January 16, 2015. In total, mass spectra for 254,235 individual pixels were evaluated. When cross-validation was employed in the training set of samples, 98.1% agreement with histopathology was obtained. Using an independent set of samples, 98.6% agreement was achieved. We used a statistical approach to evaluate 177,727 mass spectra from samples with complex, mixed histology, achieving an agreement of 81%. The developed method showed agreement with frozen section evaluation of specimen margins in 24 of 32 surgical cases prospectively evaluated. In the remaining eight patients, margins were found to be positive by DESI-MSI/Lasso, but negative by frozen section analysis. The median overall survival after resection was only 10 mo for these eight patients as opposed to 26 mo for patients with negative margins by both techniques. This observation suggests that our method (as opposed to the standard method to date) was able to detect tumor involvement at the margin in patients who developed early recurrence. Nonetheless, a larger cohort of samples is needed to validate the findings described in this study

  19. Electromagnetic simulations of coaxial type HOM coupler

    SciTech Connect

    Genfa Wu; Haipeng Wang; Robert Rimmer; Charles Reece

    2005-07-10

    DESY-type coaxial high order mode (HOM) coupler was used in many superconducting cavities. The electric probe tip is located at the maximum B-field inside the coupler can. For continuous wave (CW) high current application, the heating of this tip can be severe to degrade the cavity performance. Electromagnetic (EM) simulation was done to estimate the tip heating. The geometric remedies and detuning effect were discussed. The effect to HOM external quality factor (Qext) was also estimated due to these remedies. The HOM probe tip heating power was provided for CEBAF 12-GeV cavities and AES injector cavities.

  20. Generating circularly polarized radiation in the extreme ultraviolet spectral range at the free-electron laser FLASH

    NASA Astrophysics Data System (ADS)

    von Korff Schmising, Clemens; Weder, David; Noll, Tino; Pfau, Bastian; Hennecke, Martin; Strüber, Christian; Radu, Ilie; Schneider, Michael; Staeck, Steffen; Günther, Christian M.; Lüning, Jan; Merhe, Alaa el dine; Buck, Jens; Hartmann, Gregor; Viefhaus, Jens; Treusch, Rolf; Eisebitt, Stefan

    2017-05-01

    A new device for polarization control at the free electron laser facility FLASH1 at DESY has been commissioned for user operation. The polarizer is based on phase retardation upon reflection off metallic mirrors. Its performance is characterized in three independent measurements and confirms the theoretical predictions of efficient and broadband generation of circularly polarized radiation in the extreme ultraviolet spectral range from 35 eV to 90 eV. The degree of circular polarization reaches up to 90% while maintaining high total transmission values exceeding 30%. The simple design of the device allows straightforward alignment for user operation and rapid switching between left and right circularly polarized radiation.

  1. Heavy quark photoproduction in coherent interactions at high energies

    NASA Astrophysics Data System (ADS)

    Gonçalves, V. P.; Machado, M. V. T.; Meneses, A. R.

    2009-08-01

    We calculate the inclusive and diffractive photoproduction of heavy quarks in proton-proton collisions at Tevatron and CERN LHC energies, where the photon reaches energies larger than those ones accessible at DESY-HERA. The integrated cross section and the rapidity distributions for charm and bottom production are computed within the color dipole picture employing three phenomenological saturation models based on the color glass condensate formalism. Our results demonstrate that the experimental analyses of these reactions are feasible and that the cross sections are sensitive to the underlying parton dynamics.

  2. Longitudinal Diagnostics of Short Bunches at FLASH

    SciTech Connect

    Khan, Shaukat

    2009-01-22

    Novel acceleration concepts such as laser- or beam-driven plasma acceleration require advanced diagnostic techniques to characterize and monitor the beam. A particular challenge is to measure bunch lengths of the order of 10 femtoseconds. Several methods are currently explored at the free-electron laser FLASH at DESY/Hamburg and will be discussed it this paper, such as electro-optical sampling, streaking bunches with a transversely deflecting cavity, and -most recently implemented at FLASH--the optical-replica synthesizer, a laser-based technique promising a time resolution of a few femtoseconds.

  3. Planetary Mission Entry Vehicles Quick Reference Guide. Version 3.0

    NASA Technical Reports Server (NTRS)

    Davies, Carol; Arcadi, Marla

    2006-01-01

    This is Version 3.0 of the planetary mission entry vehicle document. Three new missions, Re-entry F, Hayabusa, and ARD have been added to t he previously published edition (Version 2.1). In addition, the Huyge ns mission has been significantly updated and some Apollo data correc ted. Due to the changing nature of planetary vehicles during the desi gn, manufacture and mission phases, and to the variables involved in measurement and computation, please be aware that the data provided h erein cannot be guaranteed. Contact Carol Davies at cdavies@mail.arc. nasa.gov to correct or update the current data, or to suggest other missions.

  4. Imprint Desorption Electrospray Ionization Mass Spectrometry Imaging for Monitoring Secondary Metabolites Production during Antagonistic Interaction of Fungi.

    PubMed

    Tata, Alessandra; Perez, Consuelo; Campos, Michel L; Bayfield, Mark A; Eberlin, Marcos N; Ifa, Demian R

    2015-12-15

    Direct analysis of microbial cocultures grown on agar media by desorption electrospray ionization mass spectrometry (DESI-MS) is quite challenging. Due to the high gas pressure upon impact with the surface, the desorption mechanism does not allow direct imaging of soft or irregular surfaces. The divots in the agar, created by the high-pressure gas and spray, dramatically change the geometry of the system decreasing the intensity of the signal. In order to overcome this limitation, an imprinting step, in which the chemicals are initially transferred to flat hard surfaces, was coupled to DESI-MS and applied for the first time to fungal cocultures. Note that fungal cocultures are often disadvantageous in direct imaging mass spectrometry. Agar plates of fungi present a complex topography due to the simultaneous presence of dynamic mycelia and spores. One of the most devastating diseases of cocoa trees is caused by fungal phytopathogen Moniliophthora roreri. Strategies for pest management include the application of endophytic fungi, such as Trichoderma harzianum, that act as biocontrol agents by antagonizing M. roreri. However, the complex chemical communication underlying the basis for this phytopathogen-dependent biocontrol is still unknown. In this study, we investigated the metabolic exchange that takes place during the antagonistic interaction between M. roreri and T. harzianum. Using imprint-DESI-MS imaging we annotated the secondary metabolites released when T. harzianum and M. roreri were cultured in isolation and compared these to those produced after 3 weeks of coculture. We identified and localized four phytopathogen-dependent secondary metabolites, including T39 butenolide, harzianolide, and sorbicillinol. In order to verify the reliability of the imprint-DESI-MS imaging data and evaluate the capability of tape imprints to extract fungal metabolites while maintaining their localization, six representative plugs along the entire M. roreri/T. harzianum

  5. Diffractive hadroproduction of W{sup {+-}} and Z{sup 0} bosons at high energies

    SciTech Connect

    Gay Ducati, M. B.; Machado, M. M.; Machado, M. V. T.

    2007-06-01

    Results from a phenomenological analysis of W and Z hard diffractive hadroproduction at high energies are reported. Using the Regge factorization approach, we consider the recent diffractive parton density functions extracted by the H1 Collaboration at DESY-HERA. In addition, we take into account multiple Pomeron exchange corrections considering a gap survival probability factor. It is found that the ratio of diffractive to nondiffractive boson production is in good agreement with the CDF and D0 data. We make predictions which could be compared to future measurements at the LHC.

  6. The ratio of the beauty structure functions Rb=FLb/F2b at low x

    NASA Astrophysics Data System (ADS)

    Boroun, G. R.

    2014-07-01

    We study the structure functions Fkb(x,Q2) (k=2,L) and the reduced cross section σrb(x,Q2) for small values of Bjorken's x variable with respect to the hard (Lipatov) pomeron for the gluon distribution and provide a compact formula for the ratio Rb that is useful to extract the beauty structure function from the beauty reduced cross section, in particular at DESY HERA. Also we show that the effects of the nonlinear corrections to the gluon distribution tame the behavior of the beauty structure function and the beauty reduced cross section at low x.

  7. Feasibility of a ring FEL at low emittance storage rings

    NASA Astrophysics Data System (ADS)

    Agapov, I.

    2015-09-01

    A scheme for generating coherent radiation at latest generation low emittance storage rings such as PETRA III at DESY (Balewski et al., 2004 [1]) is proposed. The scheme is based on focusing and subsequent defocusing of the electron beam in the longitudinal phase space at the undulator location. The expected performance characteristics are estimated for radiation in the wavelength range of 500-1500 eV. It is shown that the average brightness is increased by several orders of magnitude compared to spontaneous undulator radiation, which can open new perspectives for photon-hungry soft X-ray spectroscopy techniques.

  8. Layout and first results of the nanotomography endstation at the P05 beamline at PETRA III

    SciTech Connect

    Ogurreck, M.; Greving, I.; Beckmann, F.; Wilde, F.; Müller, M.; Marschall, F.; Vogt, H.; Last, A.; Rosario, J. J. do; Leib, E. W.

    2016-01-28

    The Helmholtz-Zentrum Geesthacht operates the P05 Imaging Beamline at the DESY storage ring PETRA III. This beamline is dedicated to micro- and nanotomography with two endstations. This paper will present the nanotomography endstation layout and first results obtained from commissioning and test experiments. First tests have been performed with CRLs as X-ray objectives and newly developed rolled X-ray prism lenses as condenser optics. This setup allows a resolution of 100 nm half period with an effective detector pixel size of 15nm. A first tomograph of a photonic glass sample was measured in early 2014.

  9. Ultrafast Coherent Diffraction Imaging with X-ray Free-Electron Lasers

    SciTech Connect

    Chapman, H N; Bajt, S; Barty, A; Benner, W; Bogan, M; Frank, M; Hau-Riege, S; London, R; Marchesini, S; Spiller, E; Szoke, A; Woods, B; Boutet, S; Hodgson, K; Hajdu, J; Bergh, M; Burmeister, F; Caleman, C; Huldt, G; Maia, F; Seibert, M M; der Spoel, D v

    2006-08-22

    The ultrafast pulses from X-ray free-electron lasers will enable imaging of non-periodic objects at near-atomic resolution [1, Neutze]. These objects could include single molecules, protein complexes, or virus particles. The specimen would be completely destroyed by the pulse in a Coulomb explosion, but that destruction will only happen after the pulse. The scattering from the sample will give structural information about the undamaged object. There are many technical challenges that must be addressed before carrying out such experiments at an XFEL, which we are doing so with experiments at FLASH, the soft-X-ray FEL at DESY.

  10. A balloon-borne ionization spectrometer with very large aperture for the detection of high energy cosmic rays

    NASA Technical Reports Server (NTRS)

    Atallah, K.; Modlinger, A.; Schmidt, W. K. H.; Cleghorn, T. F.

    1975-01-01

    A balloon experiment which was used to determine the chemical composition of very high-energy cosmic rays up to and beyond 100 GeV/nucleon is described. The detector had a geometric factor of 1 sq m sr and a total weight on the balloon of 2100 kg. The apparatus consisted of an ionization spectrometer, spark chambers, and plastic scintillation and Cherenkov counters. It was calibrated at CERN up to 24 GeV/c protons and at DESY up to 7 GeV/c electrons. In October 1972 it was flown successfully on a stratospheric balloon.

  11. Control System Design for Automatic Cavity Tuning Machines

    SciTech Connect

    Carcagno, R.; Khabiboulline, T.; Kotelnikov, S.; Makulski, A.; Nehring, R.; Nogiec, J.; Ross, M.; Schappert, W.; Goessel, A.; Iversen, J.; Klinke, D.; /DESY

    2009-05-01

    A series of four automatic tuning machines for 9-cell TESLA-type cavities are being developed and fabricated in a collaborative effort among DESY, FNAL, and KEK. These machines are intended to support high-throughput cavity fabrication for construction of large SRF-based accelerator projects. Two of these machines will be delivered to cavity vendors for the tuning of XFEL cavities. The control system for these machines must support a high level of automation adequate for industrial use by non-experts operators. This paper describes the control system hardware and software design for these machines.

  12. Molecular mass spectrometry imaging in biomedical and life science research.

    PubMed

    Pól, Jaroslav; Strohalm, Martin; Havlíček, Vladimír; Volný, Michael

    2010-11-01

    This review describes the current state of mass spectrometry imaging (MSI) in life sciences. A brief overview of mass spectrometry principles is presented followed by a thorough introduction to the MSI workflows, principles and areas of application. Three major desorption-ionization techniques used in MSI, namely, secondary ion mass spectrometry (SIMS), matrix-assisted laser desorption ionization (MALDI), and desorption electrospray ionization (DESI) are described, and biomedical and life science imaging applications of each ionization technique are reviewed. A separate section is devoted to data handling and current challenges and future perspectives are briefly discussed at the end.

  13. The design and performance of 150-MW S-band klystrons

    SciTech Connect

    Sprehn, D.; Phillips, R.M.; Caryotakis, G.

    1994-09-01

    As part of an international collaboration, the Stanford Linear Accelerator Center (SLAC) klystron group has designed, fabricated and tested a 60 Hz, 3 {mu}s, 150 MW klystron built for Deutsches Elektronen Synchrotron (DESY). A test diode with a 535 kV, 700 A electron beam was constructed to verify the gun operation. The first klystron was built and successfully met design specifications. This paper discusses design issues and experimental results of the diode and klystron including the suppression of gun oscillations.

  14. Current experiments in elementary particle physics. Revision 1-85

    SciTech Connect

    Wohl, C.G.; Armstrong, F.E.; Rittenberg, A.; Trippe, T.G.; Yost, G.P.; Oyanagi, Y.; Dodder, D.C.; Grudtsin, S.N.; Ryabov, Yu.G.; Frosch, R.

    1985-01-01

    This report contains summaries of 551 approved experiments in elementary particle physics (experiments that finished taking data before 1 January 1980 are excluded). Included are experiments at Brookhaven, CERN, CESR, DESY, Fermilab, Moscow Institute of Theoretical and Experimental Physics, Tokyo Institute of Nuclear Studies, KEK, LAMPF, Leningrad Nuclear Physics Institute, Saclay, Serpukhov, SIN, SLAC, and TRIUMF, and also experiments on proton decay. Properties of the fixed-target beams at most of the laboratories are summarized. Instructions are given for searching online the computer database (maintained under the SLAC/SPIRES system) that contains the summaries.

  15. The Superconducting RF Photoinjector at ELBE--First Operational Experience

    SciTech Connect

    Teichert, J.; Arnold, A.; Buettig, H.; Janssen, D.; Justus, M.; Lehnert, U.; Michel, P.; Murcek, P.; Schamlott, A.; Schneider, C.; Schurig, R.; Staufenbiel, F.; Xiang, R.; Kamps, T.; Rudolph, J.; Schenk, M.; Klemz, G.; Will, I.

    2009-08-04

    An RF photoinjector with a superconducting cavity (SRF gun) for installation at the Radiation Source ELBE was developed within a collaboration of BESSY, DESY, FZD, and MBI. This new and promising injector type allows CW operation and has the potential for the production of high-brightness electron beams. The gun cryostat, the electron diagnostic beamline, and the driver laser with optical beamline were installed. In November 2007 the first beam was produced. Results of the beam parameter measurements with Cs{sub 2}Te photo cathodes are presented.

  16. Analysis and modification of surfaces using molecular ions in the ambient environment.

    PubMed

    Espy, Ryan D; Badu-Tawiah, Abraham; Cooks, R Graham

    2011-10-01

    The analysis and modification of surfaces in their native conditions can be performed using new mass spectrometric methods. Ambient ionization sources, including desorption electrospray ionization (DESI), have been implemented for the rapid analysis of unmodified biological surfaces including whole plant material, tissue sections, algae, and bacterial colonies. Recent advances have shown promise for in vivo and high-throughput clinical analysis. Additionally, the recent development of ambient ion soft landing (SL) allows polyatomic ions to be deposited onto surfaces in open air. Ambient SL offers speed, control, and flexibility for surface reactions and modification.

  17. Circularly polarized carrier-envelope-phase stable attosecond pulse generation based on coherent undulator radiation.

    PubMed

    Tóth, Gy; Tibai, Z; Nagy-Csiha, Zs; Márton, Zs; Almási, G; Hebling, J

    2015-09-15

    In this Letter, we present a new method for generation of circularly polarized attosecond pulses. According to our calculations, shape-controlled, carrier-envelope-phase stable pulses of several hundred nanojoule energy could be produced by exploitation of the coherent undulator radiation of an electron bunch. Our calculations are based on an existing particle accelerator system (FLASH II in DESY, Germany). We investigated the energy dependence of the attosecond pulses on the energy of electrons and the parameters of the radiator undulator, which generate the electromagnetic radiation.

  18. Observation of γγ --> φϱ0 and γγ --> φω

    NASA Astrophysics Data System (ADS)

    Albrecht, H.; Ehrlichmann, H.; Hamacher, T.; Hofmann, R. P.; Kirchhoff, T.; Mankel, R.; Nau, A.; Nowak, S.; Schröder, H.; Schulz, H. D.; Walter, M.; Wurth, R.; Hast, C.; Kapitza, H.; Kolanoski, H.; Kosche, A.; Lange, A.; Lindner, A.; Schieber, M.; Siegmund, T.; Spaan, B.; Thurn, H.; Töpfer, D.; Wegener, D.; Eckstein, P.; Schubert, K. R.; Schwierz, R.; Waldi, R.; Paulini, M.; Reim, K.; Wegener, H.; Eckmann, R.; Mundt, R.; Oest, T.; Reiner, R.; Schmidt-Parzefall, W.; Stiewe, J.; Werner, S.; Ehret, K.; Hofmann, W.; Hüpper, A.; Khan, S.; Knöpfle, K. T.; Seeger, M.; Spengler, J.; Britton, D. I.; Charlesworth, C. E. K.; Edwards, K. W.; Hyatt, E. R. F.; Krieger, P.; Macfarlane, D. B.; Patel, P. M.; Prentice, J. D.; Saull, P. R. B.; Tzamariudaki, K.; van de Water, R. G.; Yoon, T.-S.; Franki, C.; Reßing, D.; Schmidtler, M.; Schneider, M.; Weseler, S.; Kernel, G.; Križan, P.; Križan, E.; Podobnik, T.; Živko, T.; Balagura, V.; Belyaev, I.; Chechelnitsky, S.; Danilov, M.; Droutskoy, A.; Gershtein, Yu.; Golutvin, A.; Korolko, I.; Kostina, G.; Litvintsev, D.; Lubimov, V.; Pakhlov, P.; Semenov, S.; Snizhko, A.; Tichomirov, I.; Zaitsev, Yu.; Argus Collaboration

    1994-07-01

    Two-photon production of the hadronic final states K+K-π+π- and K+K-π+π0π- has been studied using the ARGUS detector at the e+e- storage ring DORIS II at DESY. The cross sections of the reactions γγ → øϱ0 and γγ → øω have been measured for the first time. In addition, angular distrubutions have been determined for the reaction γγ → øϱ0 → K+K-π+π-.

  19. Measurement of the decay B- → D ∗0ℓ -overlineλ

    NASA Astrophysics Data System (ADS)

    Albrecht, H.; Ehrlichmann, H.; Hamacher, T.; Krüger, A.; Nau, A.; Nippe, A.; Nowak, S.; Reidenbach, M.; Schäfer, M.; Schröder, H.; Schulz, H. D.; Walter, M.; Wurth, R.; Appuhn, R. D.; Hast, C.; Herrera, G.; Kolanoski, H.; Lange, A.; Lindner, A.; Mankel, R.; Schieber, M.; Siegmund, T.; Spaan, B.; Thurn, H.; Töpfer, D.; Walther, A.; Wegener, D.; Paulini, M.; Reim, K.; Wegener, H.; Mundt, R.; Oest, T.; Schmidt-Parzefall, W.; Funk, W.; Stiewe, J.; Werner, S.; Ehret, K.; Hölscher, A.; Hofmann, W.; Hüpper, A.; Khan, S.; Knöpfle, K. T.; Spengler, J.; Britton, D. I.; Charlesworth, C. E. K.; Edwards, K. W.; Kapitza, H.; Krieger, P.; Macfarlane, D. B.; Patel, P. M.; Prentice, J. D.; Seidel, S. C.; Tzamariudaki, K.; van de Water, R. G.; Yoon, T.-S.; Reβing, D.; Schmidtler, M.; Schneider, M.; Schubert, K. R.; Strahl, K.; Waldi, R.; Weseler, S.; Kernel, G.; Križan, P.; Križnič, E.; Podobnik, T.; Živko, T.; Cronström, H. I.; Jönsson, L.; Balagura, V.; Belyaev, I.; Danilov, M.; Droutskoy, A.; Fominykh, B.; Golutvin, A.; Gorelov, I.; Kostina, G.; Lubimov, V.; Murat, P.; Pakhlov, P.; Ratnikov, F.; Rostovtsev, A.; Semenov, A.; Semenov, S.; Soloshenko, V.; Tichomirov, I.; Zaitsev, Yu.; Argus Collaboration

    1992-01-01

    Using the ARGUS detector at the e +e - storage ring DORIS II at DESY we have studied the decay B- → D ∗0ℓ -overlineλ, where ℓ - = e- or μ-, using the D 0γ and D 0π0 decay modes of the D ∗0 meson. B mesons were produced in 209 000 decays of γ(4S). Assuming electron-muon universality, we obtain a value for the branching ratio of BR( B- → D∗0ℓ -overlineλ)= (5.8 ± 1.4 ± 1.3)% .

  20. A measurement of asymmetry in the decay Λc+ --> Λπ+

    NASA Astrophysics Data System (ADS)

    Albrecht, H.; Ehrlichmann, H.; Hamacher, T.; Krüger, A.; Nau, A.; Nippe, A.; Reidenbach, M.; Schäfer, M.; Schröder, H.; Schulz, H. D.; Sefkow, F.; Wurth, R.; Appuhn, R. D.; Hast, C.; Herrera, G.; Kolanoski, H.; Lange, A.; Lindner, A.; Mankel, R.; Schieber, M.; Siegmund, T.; Spaan, B.; Thurn, H.; Töpfer, D.; Walther, A.; Wegener, D.; Paulini, M.; Reim, K.; Volland, U.; Wegener, H.; Mundt, R.; Reim, K.; Schmidt-Parzefall, W.; Funk, W.; Stiewe, J.; Werner, S.; Ball, S.; Gabriel, J. C.; Geyer, C.; Hölscher, A.; Hofmann, W.; Holzer, B.; Khan, S.; Knöpfle, K. T.; Spengler, J.; Britton, D. I.; Charlesworth, C. E. K.; Edwards, K. W.; Kapitza, H.; Krieger, P.; Kutschke, R.; Macfarlane, D. B.; Orr, R. S.; Patel, P. M.; Prentice, J. D.; Seidel, S. C.; Tsipolitis, G.; Tzamariudaki, K.; van de Water, R. G.; Yoon, T.-S.; Reßing, D.; Schael, S.; Schubert, K. R.; Strahl, K.; Waldi, R.; Weseler, S.; Boštjančič, B.; Kernel, G.; Križan, P.; Križnič, E.; Podobnik, T.; Živko, T.; Cronström, H. I.; Jönsson, L.; Balagura, V.; Danilov, M.; Droutskoy, A.; Fominykh, B.; Golutvin, A.; Gorelov, I.; Ratnikov, F.; Lubinov, V.; Pakhlov, P.; Rostovtsev, A.; Semenov, A.; Semenov, S.; Shevchenko, V.; Soloshenko, V.; Tichomirov, I.; Zaitsev, Yu.; Childers, R.; Darden, C. W.

    1992-01-01

    Using the ARGUS detector at the e+e- storage ring DORIS II at DESY, we have observed parity violation in the decay Λ+/-c --> Λπ+/-. We measure the coefficient of parity violation, αΛc, to be -0.96+/-0.42. In addition, we measure σ BR (Λ+c --> Λπ+ and σ BR (Λ+c --> Σ0π+) to be, respectively, (2.2+/-0.3+/-0.4) pb and (2.0+/-0.7+/-0.4) pb.

  1. First evidence of χc production in B meson decays

    NASA Astrophysics Data System (ADS)

    Albrecht, H.; Ehrlichmann, H.; Hamacher, T.; Krüger, A.; Nau, A.; Nippe, A.; Reidenbach, M.; Schäfer, M.; Schröder, H.; Schulz, H. D.; Sefkow, F.; Wurth, R.; Appuhn, R. D.; Hast, C.; Herrera, G.; Kolanoski, H.; Lange, A.; Lindner, A.; Mankel, R.; Schieber, M.; Siegmund, T.; Spaan, B.; Thurn, H.; Töpfer, D.; Walther, A.; Wegener, D.; Paulini, M.; Reim, K.; Volland, U.; Wegener, H.; Mundt, R.; Oest, T.; Schmidt-Parzefall, W.; Funk, W.; Stiewe, J.; Werner, S.; Ball, S.; Gabriel, J. C.; Geyer, C.; Hölscher, A.; Hofmann, W.; Holzer, B.; Khan, S.; Knöpfle, K. T.; Spengler, J.; Britton, D. I.; Charlesworth, C. E. K.; Edwards, K. W.; Kapitza, H.; Krieger, P.; Kutschke, R.; Macfarlane, D. B.; Orr, R. S.; Patel, P. M.; Prentice, J. D.; Seidel, S. C.; Tsipolitis, G.; Tzamariudaki, K.; van de Water, R. G.; Yoon, T.-S.; Reßing, D.; Schael, S.; Schubert, K. R.; Strahl, K.; Waldi, R.; Weseler, S.; Boštjančič, B.; Kernel, G.; Križan, P.; Križnič, E.; Podobnik, T.; Živko, T.; Cronström, H. O.; Jönsson, L.; Balagura, V.; Danilov, M.; Droutskoy, A.; Fominykh, B.; Golutvin, A.; Gorelov, I.; Ratnikov, F.; Lubimov, V.; Pakhlov, P.; Rostovtsev, A.; Semenov, A.; Semenov, S.; Shevchenko, V.; Soloshenko, V.; Tichomirov, I.; Zaitsev, Yu.; Childers, R.; Darden, C. W.

    1992-02-01

    Using the ARGUS detector at the e +e - storage ring DORIS II at DESY, we have obtained the first evidence for B meson decays into χc mesons. The inclusive branching ratio for the decay B → χc X was measured to the (1.05±0.35±0.25)% assuming no χc2 production. In addition, four candidates for the exclusive decay B ± → χc1 K ± have been observed, corresponding to a branching ratio of (0.19 ± 0.13 ± 0.06)%.

  2. Observation of BzBaz ; Oscillations through D^*-Lepton correlations

    NASA Astrophysics Data System (ADS)

    Schröder, Henning

    1997-04-01

    BzBaz ; oscillations were first observed from the study of Υ(4S) decays in 1987 by the ARGUS experiment at the e^+ e^- storage ring DORIS II at DESY/Hamburg(Germany). The effect of BzBaz ; oscillations manifests itself by the occurence of pairs of BzBz ; or BazBaz ; mesons in Υ(4S) decays. Such events, containing D^* mesons and leptons, were completely and partially reconstructed. The strength of the mixing parameter was determined from these events. note

  3. Observation of BzBaz Mixing Using Dileptons

    NASA Astrophysics Data System (ADS)

    Zaitsev, Yuri

    1997-04-01

    The first observation of BzBaz mixing from the study of Υ(4S) decays with two leptons in 1987 by the ARGUS experiment at the e^+ e^- storage ring DORIS II at DESY/Hamburg(Germany) is discussed. The effect of BzBaz mixing lead to the appearance of events with fast like-signed dileptons. Despite some backgroundcontamination such events provided the most statistically significant measurement of the strength of the mixing parameter. The current experimental situation in BzBaz mixing is also discussed. note

  4. Evidence for the production of the charmed, doubly strange baryon Ω c in e +e - annihilation

    NASA Astrophysics Data System (ADS)

    Albrecht, H.; Cronström, H. I.; Ehrlichmann, H.; Hamacher, T.; Hofmann, R. P.; Kirchhoff, T.; Nau, A.; Nowak, S.; Reidenbach, M.; Reiner, R.; Schröder, H.; Schulz, H. D.; Walter, M.; Wurth, R.; Appuhn, R. D.; Hast, C.; Kolanoski, H.; Lange, A.; Lindner, A.; Mankel, R.; Schieber, M.; Siegmund, T.; Spaan, B.; Thurn, H.; Töpfer, D.; Walther, A.; Wegener, D.; Paulini, M.; Reim, K.; Wegener, H.; Mundt, R.; Oest, T.; Schmidt-Parzefall, W.; Becker, U.; Funk, W.; Stiewe, J.; Werner, S.; Ehret, K.; Hölscher, A.; Hofmann, W.; Hüpper, A.; Kahn, S.; Knöpfle, K. T.; Spengler, J.; Britton, D. I.; Charlesworth, C. E. K.; Edwards, K. W.; Hyatt, E. R. F.; Kapitza, H.; Krieger, P.; Macfarlane, D. B.; Patel, P. M.; Prentice, J. D.; Saull, P. R. B.; Seidel, S. C.; Tzamariudaki, K.; van de Water, R. G.; Yoon, T.-S.; Reßing, D.; Schmidtler, M.; Schneider, M.; Schubert, K. R.; Strahl, K.; Waldi, R.; Weseler, S.; Kernel, G.; Križan, P.; Križnič, E.; Podobnik, T.; Živko, T.; Jönsson, L.; Balagura, V.; Belyaev, I.; Danilov, M.; Droutskoy, A.; Golutvin, A.; Gorelov, I.; Kostina, G.; Lubimov, V.; Murat, P.; Pakhlov, P.; Ratnikov, F.; Semenov, S.; Shibaev, V.; Soloshenko, V.; Tichomirov, I.; Zaitsev, Yu.; Argus Collaboration

    1992-08-01

    Using the detector ARGUS at the storage ring DORIS II of DESY, we have found evidence for the production of the charmed and doubly strange baryon Ω c through its decay channel Ξ -K -π +π +. Its mass has been determined to be ((2719.0±7.0±2.5)MeV/ c2, and the product of production cross section and branching ratio the above channel to be (2.41±0.90±0.30) pb.

  5. Status of 3.9 GHz superconducting RF cavity technology at Fermilab

    SciTech Connect

    Harms, E.; Arkan, T.; Bellantoni, L.; Carter, H.; Edwards, H.; Foley, M.; Khabiboulline, T.; Mitchell, D.; Olis, D.; Rowe, A.; Solyak, N.; /Fermilab

    2007-06-01

    Fermilab is involved in an effort to assemble 3.9 GHz superconducting RF cavities into a four cavity cryomodule for use at the DESY TTF/FLASH facility as a third harmonic structure. The design gradient of the cavities is 14 MV/m. This effort involves design, fabrication, intermediate testing, assembly, and eventual delivery of the cryomodule. We report on all facets of this enterprise from design through future plans. Included will be test results of single 9-cell cavities, lessons learned, and current status.

  6. Vertical and horizontal test results of 3.9-GHz accelerating cavities at FNAL

    SciTech Connect

    Khabiboulline, T.; Edwards, H.; Foley, M.; Harms, E.; Hocker, James Andrew; Mitchell, D.; Rowe, A.; Solyak, N.; /Fermilab

    2008-06-01

    The 3rd harmonic 3.9GHz accelerating cavity was proposed to improve the beam performance of the VUV FEL, FLASH. In the frame of a collaborative agreement, Fermilab will provide DESY with a cryomodule containing a string of four cavities. Seven 9-cell Nb cavities were tested and six of them did reach accelerating gradient up to 24 MV/m almost twice more than design value of 14 MV/m. Two of these cavities are with new HOM couplers with improved design. In this paper we present all results of the vertical and horizontal tests.

  7. Cavity Preparation/assembly Techniques and Impact on Q, Realistic Q - Factors in a Module, Review of Modules

    SciTech Connect

    Peter Kneisel

    2005-03-19

    This contribution summarizes the surface preparation procedures for niobium cavities presently used both in laboratory experiments and for modules, such as buffered chemical polishing (BCP), electropolishing (EP), high pressure ultrapure water rinsing (HPR), CO{sub 2} snow cleaning and high temperature heat treatments for hydrogen degassing or postpurification. The impact of surface treatments and the degree of cleanliness during assembly procedures on cavity performance (Q - value and accelerating gradient E{sub acc}) will be discussed. In addition, an attempt will be made to summarize the experiences made in module assemblies in different labs/projects such as DESY(TTF), Jlab (Upgrade) and SNS.

  8. Comparison of buffered chemical polished and electropolished 3.9 GHz cavities

    SciTech Connect

    Edwards, Helen; Cooper, Charlie A.; Ge, Mingqi; Gonin, Ivan V.; Harms, Elvin R.; Khabiboulline, Timergali N.; Solyak, Nikolay; /Fermilab

    2009-10-01

    Five 3.9 GHz 9 cell cavities have been measured for the DESY FLASH module. These cavities were BCP processed and reached gradients of typically about 25 MV/m with Q drop starting at about 20 MV/m. Recently a few one cell cavities have been processed with EP and at least one has tested to a gradient of 30 MV/m with Q drop starting at about 25 MV/m. We will compare the results and give an update to the thermal analysis in relation to global thermal breakdown at 3.9 GHz.

  9. Parton saturation scaling function for exclusive production of vector mesons and deeply virtual Compton scattering

    NASA Astrophysics Data System (ADS)

    Ben, F. G.; Machado, M. V. T.; Sauter, W. K.

    2017-09-01

    We provide a universal expression of cross sections for the exclusive vector meson production and deeply virtual Compton scattering (DVCS) in photon-proton and photon-nucleus interactions based on the geometric scaling phenomenon. The theoretical parametrization based on the scaling property depends only on the single variable τA=Q2/Qsat2, where the saturation scale, Qsat, drives the energy dependence and the corresponding nuclear effects. This phenomenological result describes all available data from DESY-HERA for ρ ,ϕ ,J /ψ production and DVCS measurements. A discussion is also carried out on the size of nuclear shadowing corrections on photon-nucleus interaction.

  10. Statistical Object Recognition

    DTIC Science & Technology

    1993-01-01

    optimization problem. This has the advantage of providing an explicit characterization of the problem, while separating it from the description of the algu ...projection function is in- verted . Jiang et a). show impressive results using robust chanmfer matching to register multi-modal 3D medical imagery. 6.4...9A:. RELA TED WORK wet- thtre atre tu’rr paramlet-rM., Thomllpson anid \\Ilidiil desi!LW � ilivar-la ill vert ex pairsý. Thiese are h ased on an ides

  11. Validation of MIL-F-9490D - General Specification for Flight Control System for Piloted Military Aircraft. Volume I. Summary of YF-17 and C-5A Validations

    DTIC Science & Technology

    1977-04-01

    Militar ApriI 1,76"r- Janv--y i)77;! Volume Is Summ~ary of YF-17 and C-5A Validations, /NON-77-PIS r/ Iya’dr B./t~ art ~ebok,, Northrop Corporation H...rcraft, General. Spcc Iifi~cat ion for,"’ daited 13 Muarch 1964, to reflect the prcsent aind proj ected staite-of-the- art of f light cont rol system...state-of-the- art of flight cenitre 1sv!;tem technlologY and is intended for use a!; a specification for prOCUF-ement: desi gn, test and installation

  12. Microfocusing transfocator for 1D and 2D compound refractive lenses.

    PubMed

    Zozulya, A V; Bondarenko, S; Schavkan, A; Westermeier, F; Grübel, G; Sprung, M

    2012-08-13

    An x-ray transfocator design for the combined use of 1D and 2D compound refractive lenses is described. The device includes stacks of beryllium parabolic lenses with different radii of curvature and provides microfocused x-ray beams in the 4-20 keV photon energy range. The transfocator has been implemented at the P10 Coherence Beamline of the PETRA III synchrotron at DESY, Hamburg. Results of transfocator performance and applications for coherent x-ray scattering experiments are presented.

  13. RF design and processing of a power coupler for third harmonic superconducting cavities

    SciTech Connect

    Li, Jianjian; Harms, Elvin; Kubicki, Tom; Nicklaus, Dennis; Olis, Daniel; Prieto, Peter; Reid, John; Solyak, Nikolay; Wong, Thomas; /IIT, Chicago

    2007-06-01

    The FLASH user facility providing free electron laser radiation is built based on the TTF project at DESY. Fermilab has the responsibility for the design and processing of a third harmonic, 3.9 GHz, superconducting cavity which is powered via a coaxial power coupler. Six power couplers have been manufactured at CPI after successful design of the power coupler including RF simulation, multipacting calculation, and thermal analysis. The power couplers are being tested and processed with high pulsed power in an elaborate test stand at Fermilab now. This paper presents the RF design and processing work of the power coupler.

  14. Higher Order Modes HOM___s in Coupled Cavities of the Flash Module ACC39

    SciTech Connect

    Shinton, I.R.R.; Jones, R.M.; Li, Z.; Zhang, P.; /Manchester U. /Cockcroft Inst. Accel. Sci. Tech. /DESY

    2012-09-14

    We analyse the higher order modes (HOM's) in the 3.9GHz bunch shaping cavities installed in the FLASH facility at DESY. A suite of finite element computer codes (including HFSS and ACE3P) and globalised scattering matrix calculations (GSM) are used to investigate the modes in these cavities. This study is primarily focused on the dipole component of the multiband expansion of the wakefield, with the emphasis being on the development of a HOM-based BPM system for ACC39. Coupled inter-cavity modes are simulated together with a limited band of trapped modes.

  15. High energy accelerator and colliding beam user group. Progress report, March 1, 1983-February 29, 1984

    SciTech Connect

    Not Available

    1983-01-01

    Topics covered in this research summary include: status of the OPAL collaboration at LEP, CERN; two-photon physics at PLUTO; search for new particles at JADE; neutrinoless double beta decay at DESY; Fermilab jet experiment; neutrino deuterium experiment in the 15 foot bubble chamber at Fermilab; deep inelastic muon experiment at Fermilab; new experiments at the proton-antiproton collider; neutrino-electron scattering at Los Alamos; parity violation in proton-proton scattering; an upgrade of laboratory and computer facilities; and a study of bismuth germanate as a durable scintillation crystal. (GHT)

  16. A time projection chamber with GEM-based readout

    NASA Astrophysics Data System (ADS)

    Attié, David; Behnke, Ties; Bellerive, Alain; Bezshyyko, Oleg; Bhattacharya, Deb Sankar; Bhattacharya, Purba; Bhattacharya, Sudeb; Caiazza, Stefano; Colas, Paul; Lentdecker, Gilles De; Dehmelt, Klaus; Desch, Klaus; Diener, Ralf; Dixit, Madhu; Fleck, Ivor; Fujii, Keisuke; Fusayasu, Takahiro; Ganjour, Serguei; Gao, Yuanning; Gros, Philippe; Hayman, Peter; Hedberg, Vincent; Ikematsu, Katsumasa; Jönsson, Leif; Kaminski, Jochen; Kato, Yukihiro; Kawada, Shin-ichi; Killenberg, Martin; Kleinwort, Claus; Kobayashi, Makoto; Krylov, Vladyslav; Li, Bo; Li, Yulan; Lundberg, Björn; Lupberger, Michael; Majumdar, Nayana; Matsuda, Takeshi; Mehdiyev, Rashid; Mjörnmark, Ulf; Müller, Felix; Münnich, Astrid; Mukhopadhyay, Supratik; Ogawa, Tomohisa; Oskarsson, Anders; Österman, Lennart; Peterson, Daniel; Riallot, Marc; Rosemann, Christoph; Roth, Stefan; Schade, Peter; Schäfer, Oliver; Settles, Ronald Dean; Shirazi, Amir Noori; Smirnova, Oxana; Sugiyama, Akira; Takahashi, Tohru; Tian, Junping; Timmermans, Jan; Titov, Maksym; Tsionou, Dimitra; Vauth, Annika; Wang, Wenxin; Watanabe, Takashi; Werthenbach, Ulrich; Yang, Yifan; Yang, Zhenwei; Yonamine, Ryo; Zenker, Klaus; Zhang, Fan

    2017-06-01

    For the International Large Detector concept at the planned International Linear Collider, the use of time projection chambers (TPC) with micro-pattern gas detector readout as the main tracking detector is investigated. In this paper, results from a prototype TPC, placed in a 1 T solenoidal field and read out with three independent Gas Electron Multiplier (GEM) based readout modules, are reported. The TPC was exposed to a 6 GeV electron beam at the DESY II synchrotron. The efficiency for reconstructing hits, the measurement of the drift velocity, the space point resolution and the control of field inhomogeneities are presented.

  17. Genetic structure, diversity, and allelic richness in composite collection and reference set in chickpea (Cicer arietinum L.).

    PubMed

    Upadhyaya, Hari D; Dwivedi, Sangam L; Baum, Michael; Varshney, Rajeev K; Udupa, Sripada M; Gowda, Cholenahalli L L; Hoisington, David; Singh, Sube

    2008-10-16

    Plant genetic resources (PGR) are the basic raw materials for future genetic progress and an insurance against unforeseen threats to agricultural production. An extensive characterization of PGR provides an opportunity to dissect structure, mine allelic variations, and identify diverse accessions for crop improvement. The Generation Challenge Program http://www.generationcp.org conceptualized the development of "composite collections" and extraction of "reference sets" from these for more efficient tapping of global crop-related genetic resources. In this study, we report the genetic structure, diversity and allelic richness in a composite collection of chickpea using SSR markers, and formation of a reference set of 300 accessions. The 48 SSR markers detected 1683 alleles in 2915 accessions, of which, 935 were considered rare, 720 common and 28 most frequent. The alleles per locus ranged from 14 to 67, averaged 35, and the polymorphic information content was from 0.467 to 0.974, averaged 0.854. Marker polymorphism varied between groups of accessions in the composite collection and reference set. A number of group-specific alleles were detected: 104 in Kabuli, 297 in desi, and 69 in wild Cicer; 114 each in Mediterranean and West Asia (WA), 117 in South and South East Asia (SSEA), and 10 in African region accessions. Desi and kabuli shared 436 alleles, while wild Cicer shared 17 and 16 alleles with desi and kabuli, respectively. The accessions from SSEA and WA shared 74 alleles, while those from Mediterranean 38 and 33 alleles with WA and SSEA, respectively. Desi chickpea contained a higher proportion of rare alleles (53%) than kabuli (46%), while wild Cicer accessions were devoid of rare alleles. A genotype-based reference set captured 1315 (78%) of the 1683 composite collection alleles of which 463 were rare, 826 common, and 26 the most frequent alleles. The neighbour-joining tree diagram of this reference set represents diversity from all directions of the tree

  18. Diagnostic technique applied for FEL electron bunches

    NASA Astrophysics Data System (ADS)

    Brovko, O.; Grebentsov, A.; Morozov, N.; Syresin, E.; Yurkov, M.

    2016-05-01

    Diagnostic technique applied for FEL ultrashort electron bunches is developed at JINR-DESY collaboration within the framework of the FLASH and XFEL projects. Photon diagnostics are based on calorimetric measurements and detection of undulator radiation. The infrared undulator constructed at JINR and installed at FLASH is used for longitudinal bunch shape measurements and for two-color lasing provided by the FIR and VUV undulators. The pump probe experiments with VUV and FIR undulators provide the bunch profile measurements with resolution of several femtosecond. The new three microchannel plates (MCP) detectors operated in X-ray range are under development now in JINR for SASE1-SASE 3 European XFEL.

  19. Charts for Helicopter-Performance Estimation

    DTIC Science & Technology

    1945-08-01

    I& Herbert W. Talkin SUMWARY Charts are presented relating helicopter aerod~amio desi~ variables to perfommnce in steady powered flight . The flight ...spec+.alproblem of’the ccnd.itions for blade stall in horizontal flight —.. — . . NACA ACR NO. L5E04 ~ 3 Section 1 .- “ii”oontii~ere~-In seot~on -6.- ti...GENERAL THEOHY A general equation for the aerodynam~.c perfcmlsnce of helicopters in steady powered flight is dertved by a procedure similar to thst

  20. Photoinjector drive laser of the FLASH FEL.

    PubMed

    Will, Ingo; Templin, Horst I; Schreiber, Siegfried; Sandner, Wolfgang

    2011-11-21

    The upgraded photoinjector drive laser of the free-electron laser facility FLASH at DESY Hamburg is described in this paper. This laser produces trains of 800 and 2400 ultraviolet picosecond pulses at 1 MHz and 3 MHz repetition rate in the trains, respectively. The amplifying elements of the system are Nd:YLF-rods, which are pumped by fiber-coupled semiconductor diodes. Compared to the flashlamp-pumped photocathode laser previously used at FLASH, the new diode-pumped laser features a better reliability and a significantly improved stability of its pulse parameters.

  1. FLASH Beam-Off RF Measurements and Analyses

    SciTech Connect

    Pei, Shilun; Adolphsen, Chris; Carwardine, John; /Argonne

    2009-03-31

    The FLASH L-band (1.3 GHz) superconducting accelerator facility at DESY has a Low Level RF (LLRF) system that is similar to that envisioned for ILC. This system has extensive monitoring capability and was used to gather performance data relevant to ILC. In particular, waveform data were recorded with beam off for three, 8-cavity cryomodules to evaluate the input rf stability, perturbations to the SC cavity frequencies and the rf overhead required to achieve constant gradient during the 800-s pulses. In this paper, we discuss the measurements and data analysis procedures and present key findings on the pulse-to-pulse input rf and cavity field stability.

  2. Current Experiments in Particle Physics. 1996 Edition.

    SciTech Connect

    Galic, Hrvoje

    2003-06-27

    This report contains summaries of current and recent experiments in Particle Physics. Included are experiments at BEPC (Beijing), BNL, CEBAF, CERN, CESR, DESY, FNAL, Frascati, ITEP (Moscow), JINR (Dubna), KEK, LAMPF, Novosibirsk, PNPI (St. Petersburg), PSI, Saclay, Serpukhov, SLAC, and TRIUMF, and also several proton decay and solar neutrino experiments. Excluded are experiments that finished taking data before 1991. Instructions are given for the World Wide Web (WWW) searching of the computer database (maintained under the SLAC-SPIRES system) that contains the summaries.

  3. Design, Analysis and Implementation of the Primary Operation, RETRIEVE-COMMON, of the Multi-Backend Database System (MBDS).

    DTIC Science & Technology

    1985-06-01

    Hsiang -lung Tung 2 8 lane 46 Ming- Chuan Road Ctia-i CiLty Taiwan 600 Pepublic of 6hina tit 148 •, 1,,J., ., FILMED 4.~ 0-85 DTIC p.0 ...DATABASE SYSTEM (MBDS) by ~i. Hsiang -Lung Tung June 1985 Thesis Advisor: David K. Hsiao -’-" Approved for public release; distribution is unlimited P- A...Desi n. Analysis and Implementation of the grimazy operation Retriee-Coamon of the Rulti-BAckbnd Datafase System (MBDS by Hsiang -Lung Tung

  4. The Fermilab data storage infrastructure

    SciTech Connect

    Jon A Bakken et al.

    2003-02-06

    Fermilab, in collaboration with the DESY laboratory in Hamburg, Germany, has created a petabyte scale data storage infrastructure to meet the requirements of experiments to store and access large data sets. The Fermilab data storage infrastructure consists of the following major storage and data transfer components: Enstore mass storage system, DCache distributed data cache, ftp and Grid ftp for primarily external data transfers. This infrastructure provides a data throughput sufficient for transferring data from experiments' data acquisition systems. It also allows access to data in the Grid framework.

  5. Observation of Femtosecond Bunch Length Using a Transverse Deflecting Structure

    SciTech Connect

    Huning, M.; Bolzmann, A.; Schlarb, H.; Frisch, J.; McCormick, D.; Ross, M.; Smith, T.; Rossbach, J.; /Hamburg U.

    2005-12-14

    The design of the VUV-FEL at DESY demands bunch lengths in the order of 50 fs and below. For the diagnostic of such very short bunches a transverse deflecting RF structure (LOLA) has been installed which streaks the beam according to the longitudinal distribution. Tests in the VUV-FEL yielded a rich substructure of the bunches. The most pronounced peak in the has a rms length of approximately 50 fs during FEL operation and below 20 fs FWHM at maximum compression. Depending on the transverse focusing a resolution well below 50 fs was achieved.

  6. A possible experiment at LEUTL to characterize surface roughness Wakefield effects

    SciTech Connect

    Biedron, S.G.; Dattoli, G.; Fawley, W.M.; Freund, H.P.; Huang, Zhirong; Lewellen, J.W.; Milton, S.V.; Nuhn, H.D.

    2001-01-10

    Wakefield effects due to internal vacuum chamber roughness may increase the electron beam energy spread and so have become an immediate concern for future x-ray free-electron laser (FEL) project developments such as the SLAC Linac Coherent Light Source (LCLS) and the DESY TESLA x-ray FEL. We describe a possible experiment to characterize the effects of surface roughness on an FEL driven by self-amplified spontaneous emission (SASE) operation. Although the specific system described is not completely identical to the above-proposed projects, much useful scaling information could be obtained and applied to shorter wavelength systems.

  7. Current experiments in elementary particle physics. Revised

    SciTech Connect

    Galic, H.; Wohl, C.G.; Armstrong, B.; Dodder, D.C.; Klyukhin, V.I.; Ryabov, Yu.G.; Illarionova, N.S.; Lehar, F.; Oyanagi, Y.; Olin, A.; Frosch, R.

    1992-06-01

    This report contains summaries of 584 current and recent experiments in elementary particle physics. Experiments that finished taking data before 1986 are excluded. Included are experiments at Brookhaven, CERN, CESR, DESY, Fermilab, Tokyo Institute of Nuclear Studies, Moscow Institute of Theoretical and Experimental Physics, KEK, LAMPF, Novosibirsk, Paul Scherrer Institut (PSI), Saclay, Serpukhov, SLAC, SSCL, and TRIUMF, and also several underground and underwater experiments. Instructions are given for remote searching of the computer database (maintained under the SLAC/SPIRES system) that contains the summaries.

  8. Hard Exclusive Vector Meson Leptoproduction At HERMES

    SciTech Connect

    Golembiovskaya, M.

    2011-07-15

    The HERMES experiment at DESY, Hamburg collected a set of data on hard exclusive vector meson ({rho}{sup 0}{phi},{omega}) leptoproduction using the 27.6 GeV longitudinally polarized lepton beam of HERA accelerator and longitudinally or transversely polarized or unpolarized gas targets. Measurements of exclusive vector meson production provide access to the structure of the nucleon since the process can be described in terms of Generalized Parton Distributions (GPDs). An overview of the HERMES results on exclusive vector mesons production is presented.

  9. Neutron dosimetry with TL albedo dosemeters at high energy accelerators.

    PubMed

    Haninger, T; Fehrenbacher, G

    2007-01-01

    The GSF-Personal Monitoring Service uses the TLD albedo dosemeter as standard neutron personal dosemeter. Due to its low sensitivity for fast neutrons however, it is generally not recommended for workplaces at high-energy accelerators. Test measurements with the albedo dosemeter were performed at the accelerator laboratories of GSI in Darmstadt and DESY in Hamburg to reconsider this hypothesis. It revealed that the albedo dosemeter can also be used as personal dosemeter at these workplaces, because at all measurement locations a significant part of neutrons with lower energies could be found, which were produced by scattering at walls or the ground.

  10. Nomogramme der Sickerwasserprognose

    NASA Astrophysics Data System (ADS)

    Schneider, Wilfried; Stöfen, Heinke

    Kurzfassung Modelle zur Sickerwasserprognose stehen in unterschiedlicher Komplexität zur Verfügung. Komplexe Modelle werden aufgrund der schwierigen Handhabung und des enormen Eingabedatenumfangs in der Praxis kaum angewandt. Grobe Abschätzmethoden sind dagegen nicht ausreichend wissenschaftlich fundiert, um damit justiziable Ergebnisse erzielen zu können. Um die Kluft zwischen komplexer und einfacher, jedoch justiziabler sowie wissenschaftlich fundierter Methode zu schmälern, wurden Nomogramme für Sickerwasserprognosen zur Berücksichtigung der Endlichkeit der Quelle entwickelt. Mithilfe der Nomogramme können ohne Modellierungserfahrung schnell und einfach die zu erwartenden Schadstoffkonzentrationen am Ort der Beurteilung abgeschätzt werden, falls die Endlichkeit der Quelle der hauptsächlich zur Abminderung führende Prozess ist. Die Nomogramme basieren auf analytischen Lösungen der eindimensionalen Advektions-Dispersions-Gleichung. Sie berücksichtigen die Prozesse Advektion, Diffusion in Bodenwasser und -luft, Dispersion, lineare Sorption, Abbau 1. Ordnung innerhalb einer aus mehreren Bodenschichten bestehenden Sickerwasserzone, wobei die Endlichkeit der Schadstoffmasse in der Bodenkontamination einbezogen wird. Die Genauigkeit der Nomogramme wird dargestellt. Models of different complexity are available for groundwater risk assessment. In practice complex models are hardly used, due to their difficult handling and large data requirement. Rough estimation methods are not sufficiently scientifically founded to produce justiciable results. To reduce the gap between complex and easy to use but justiciable and scientifically founded methods we developed nomograms for groundwater risk assessment which take into account the finite mass of contaminant in the source. With the help of the nomograms the expected concentrations at the point of compliance (transition between the unsaturated and saturated zone) can be estimated easily, fast and without any

  11. Application of desorption electrospray ionization mass spectrometry imaging in breast cancer margin analysis

    PubMed Central

    Calligaris, David; Caragacianu, Diana; Liu, Xiaohui; Norton, Isaiah; Thompson, Christopher J.; Richardson, Andrea L.; Golshan, Mehra; Easterling, Michael L.; Santagata, Sandro; Dillon, Deborah A.; Jolesz, Ferenc A.; Agar, Nathalie Y. R.

    2014-01-01

    Distinguishing tumor from normal glandular breast tissue is an important step in breast-conserving surgery. Because this distinction can be challenging in the operative setting, up to 40% of patients require an additional operation when traditional approaches are used. Here, we present a proof-of-concept study to determine the feasibility of using desorption electrospray ionization mass spectrometry imaging (DESI-MSI) for identifying and differentiating tumor from normal breast tissue. We show that tumor margins can be identified using the spatial distributions and varying intensities of different lipids. Several fatty acids, including oleic acid, were more abundant in the cancerous tissue than in normal tissues. The cancer margins delineated by the molecular images from DESI-MSI were consistent with those margins obtained from histological staining. Our findings prove the feasibility of classifying cancerous and normal breast tissues using ambient ionization MSI. The results suggest that an MS-based method could be developed for the rapid intraoperative detection of residual cancer tissue during breast-conserving surgery. PMID:25246570

  12. Using short helically wrapped single-mode fibers as illuminated fiducials

    NASA Astrophysics Data System (ADS)

    Ishikawa, Yuzo; Edelstein, Jerry; Silber, Joseph H.; Poppett, Claire

    2016-09-01

    The Dark Energy Spectroscopic Instrument (DESI) is a Stage IV ground-based dark energy experiment to map the large-scale structure of the universe and to probe the nature of dark energy. DESI is a massively multiplexed fiber-fed spectrograph, using a 5000-ffber-positioner focal plane assembly to image millions of galaxies. Since these fiber positioners must be positioned to 10-um accuracy, the focal plane must be mapped to micron level precision. We intend to use illuminated fiducials as point sources to accurately calibrate the focal plane surface. In this study we explored using short single-mode fibers as illuminated fiducials. However, despite the advantages of using single-mode fibers, as a near point source, optical fibers have length-dependence behavior: as shorter tend to guide core light into the cladding, which is not ideal for fiducial centroid-measurements. In this paper, we demonstrate that adding tight helical bends to the fibers eliminates unwanted flux in the cladding, improving centroid measurements by more than 50%. This technique has proven with fibers as short as 2-inches, obtaining centroid with at least 0.5-micron precision. This experiment eliminates fiber-length dependence, thus proving the viability of using short single-mode fibers as illuminated fiducials or similar applications

  13. High-Speed Tandem Mass Spectrometric in Situ Imaging by Nanospray Desorption Electrospray Ionization Mass Spectrometry

    SciTech Connect

    Lanekoff, Ingela T.; Burnum-Johnson, Kristin E.; Thomas, Mathew; Short, Joshua TL; Carson, James P.; Cha, Jeeyeon; Dey, Sudhansu K.; Yang, Pengxiang; Prieto Conaway, Maria C.; Laskin, Julia

    2013-10-15

    Nanospray desorption electrospray ionization (nano-DESI) combined with tandem mass spectrometry (MS/MS), high-resolution mass analysis (m/m=17,500 at m/z 200), and rapid spectral acquisition enabled simultaneous imaging and identification of more than 300 molecules from 92 selected m/z windows (± 1 Da) with a spatial resolution of better than 150 um. Uterine sections of implantation sites on day 6 of pregnancy were analyzed in the ambient environment without any sample pre-treatment. MS/MS imaging was performed by scanning the sample under the nano-DESI probe at 10 um/s while acquiring higher-energy collision-induced dissociation (HCD) spectra for a targeted inclusion list of 92 m/z values at a rate of ~6.3 spectra/s. Molecular ions and their corresponding fragments, separated using high-resolution mass analysis, were assigned based on accurate mass measurement. Using this approach, we were able to identify and image both abundant and low-abundance isobaric species within each m/z window. MS/MS analysis enabled efficient separation and identification of isobaric sodium and potassium adducts of phospholipids. Furthermore, we identified several metabolites associated with early pregnancy and obtained the first 2D images of these molecules.

  14. Using ambient ozone for assignment of double bond position in unsaturated lipids.

    PubMed

    Ellis, Shane R; Hughes, Jessica R; Mitchell, Todd W; in het Panhuis, Marc; Blanksby, Stephen J

    2012-03-07

    Unsaturated lipids deposited onto a range of materials are observed to react with the low concentrations of ozone present in normal laboratory air. Parent lipids and ozonolysis cleavage products are both detected directly from surfaces by desorption electrospray ionisation mass spectrometry (DESI-MS) with the resulting mass spectra providing clear evidence of the double bond position within these molecules. This serendipitous process has been coupled with thin-layer chromatography (TLC) to provide a simple but powerful approach for the detailed structural elucidation of lipids present in complex biological extracts. Lipid extracts from human lens were deposited onto normal phase TLC plates and then developed to separate components according to lipid class. Exposure of the developed plates to laboratory air for ca. 1 h prior to DESI-MS analysis gave rise to ozonolysis products allowing for the unambiguous identification of double bond positions in even low abundant, unsaturated lipids. In particular, the co-localization of intact unsaturated lactosylceramides (LacCer) with products from their oxidative cleavage provide the first evidence for the presence of three isomeric LacCer (d18:0/24:1) species in the ocular lens lipidome, i.e., variants with double bonds at the n-9, n-7 and n-5 positions.

  15. Synergistic interaction between diene valepotriates from Valeriana glechomifolia Meyer (Valerianaceae) and classical antidepressants: an isobolographic analysis.

    PubMed

    Müller, Liz G; Stolz, Eveline D; Betti, Andresa H; Herzfeldt, Vivian; Rates, Stela M K

    2015-07-01

    Combinations of different classes of antidepressants (including herbal adjuvants) have been used as an alternative means of achieving better results in the treatment of depressed patients. However, studies characterizing the interactions between herbal adjuvants and antidepressants are lacking. This study is the first to investigate the interaction between diene valepotriates (VAL) from Valeriana glechomifolia, a species with antidepressant-like effects, and imipramine (IMI), desipramine (DESI) and bupropion (BUP). The interactions were assessed via isobolographic analyses, which represent a tool for evaluating interactions between drugs. The interaction between VAL and each antidepressant was evaluated in mice given concurrent oral administration of each drug with fixed ED50 ratios and subjected to a forced swimming test (FST). Spontaneous locomotion was measured in the open field test. The drug combinations produced a dose-dependent anti-immobility effect in the FST without altering mouse locomotor activity. Isobolographic analysis revealed that VAL resulted in synergistic interactions in combination with each of the antidepressants tested. The synergistic interactions between VAL and IMI, DESI and BUP highlight the potential for VAL to serve as adjuvants to antidepressant drugs and suggest that VAL does not directly target the same sites on neuronal transporters as the antidepressants. © 2015 Royal Pharmaceutical Society.

  16. Preface

    NASA Astrophysics Data System (ADS)

    Dorn, H.; Lüst, D.

    2004-06-01

    These proceedings contain most of the talks presented at the 36th International Symposium Ahrenshoop on the Theoryof Elementary Particles which took place from August 26-30, 2003 in Berlin-Schmöckwitz. The symposium was jointly organized by the Institute of Physics of the Humboldt University Berlin and DESY Zeuthen.The conference continued an already quite long tradition starting with meetings at the Baltic Sea cost, mainly in the little scenic village Ahrenshoop. Over the years the organizers kept bringing together physicists from various countries in a both productive and familiar atmosphere.This years symposium was devoted to Recent Developments in String/M-Theory and Field Theory. We were able to welcome a remarkable set of leading scientists in the field. All the five days started with a pedagogical overview talk on most recent topics, such as string cosmology and phenomenology, strings and branes in plane wave backgrounds, D-branes and time dependent dynamics, matrix models and topological field theories, higher spin theories, followed then by more specific shorter contributions.We thank all the authors for preparing their manuscripts. For financial support we thank the DFG-Schwerpunktprogramm 1096, DESY Zeuthen and Humboldt University. Last not least our thanks go to our co-organizers Johanna Erdmenger, Stephan Stieberger and Gerhard Weigt.

  17. Pharmaceutical cleaning validation using non-proximate large-area desorption electrospray ionization mass spectrometry.

    PubMed

    Soparawalla, Santosh; Salazar, Gary A; Perry, Richard H; Nicholas, Mark; Cooks, R Graham

    2009-01-01

    Desorption electrospray ionization (DESI) is a droplet-based ionization method that is applied to samples in the ambient environment with little or no sample preparation. Its utility for industrial applications is explored here for the case of pharmaceutical cleaning validation. A non-proximate large-area DESI system was built to examine representative areas of the surfaces of reaction vessels used in active product ingredient (API) manufacturing. A large-area sprayer capable of sampling an area of approximately 2.5 cm(2) was coupled with a transport tube to allow sensitive, representative sampling of APIs from a stainless steel surface 1 m away from the mass spectrometer. The system was used to detect the APIs neostigmine, acebutolol, amiloride, amiodarone, ibuprofen, montelukast, potassium clavulanate, and beta-estradiol, at levels as low as 30-10 ng/cm(2), easily satisfying the general acceptable limits set by the pharmaceutical industry. These levels were achieved from surfaces resembling the equipment used in API manufacturing processes at a rate of 30 s per analysis.

  18. Rapid Detection of Necrosis in Breast Cancer with Desorption Electrospray Ionization Mass Spectrometry

    PubMed Central

    Tata, Alessandra; Woolman, Michael; Ventura, Manuela; Bernards, Nicholas; Ganguly, Milan; Gribble, Adam; Shrestha, Bindesh; Bluemke, Emma; Ginsberg, Howard J.; Vitkin, Alex; Zheng, Jinzi; Zarrine-Afsar, Arash

    2016-01-01

    Identification of necrosis in tumors is of prognostic value in treatment planning, as necrosis is associated with aggressive forms of cancer and unfavourable outcomes. To facilitate rapid detection of necrosis with Mass Spectrometry (MS), we report the lipid MS profile of necrotic breast cancer with Desorption Electrospray Ionization Mass Spectrometry (DESI-MS) imaging validated with statistical analysis and correlating pathology. This MS profile is characterized by (1) the presence of the ion of m/z 572.48 [Cer(d34:1) + Cl]− which is a ceramide absent from the viable cancer subregions; (2) the absence of the ion of m/z 391.25 which is present in small abundance only in viable cancer subregions; and (3) a slight increase in the relative intensity of known breast cancer biomarker ions of m/z 281.25 [FA(18:1)-H]− and 303.23 [FA(20:4)-H]−. Necrosis is accompanied by alterations in the tissue optical depolarization rate, allowing tissue polarimetry to guide DESI-MS analysis for rapid MS profiling or targeted MS imaging. This workflow, in combination with the MS profile of necrosis, may permit rapid characterization of necrotic tumors from tissue slices. Further, necrosis-specific biomarker ions are detected in seconds with single MS scans of necrotic tumor tissue smears, which further accelerates the identification workflow by avoiding tissue sectioning and slide preparation. PMID:27734938

  19. Support of experimental high energy physics research at the University of South Carolina. Final technical report, February 1992--February 1996

    SciTech Connect

    Purohit, M.V.; Rosenfeld, C.; Wilson, J.R.

    1996-12-31

    This brief report summarizes the activities of the University of South Carolina`s high energy physics group during the three-year period. The activities of the group began in 1980 under a predecessor grant from DOE, and continue today under a successor grant. The retirements of one grant in favor of another were for reasons of administrative convenience or necessity. The characterization of the report as final is not reflective of the group`s projects, which by-and-large continue with support from the successor grant. The experiments with which the USC group had some significant relationship during the period of this grant were ARGUS (at DESY`s DORIS e{sup +}e{sup {minus}} collider), AMY (at KEK`s TRISTAN e{sup +}e{sup {minus}} collider). Fermilab E687, Fermilab E789, Fermilab E791, Fermilab E803, and Fermilab E872. The authors give a brief synopsis of USC`s participation in each of these projects and a few projects of lesser magnitude as well.

  20. Effects of Tailored Surface Chemistry on Desorption Electrospray Ionization Mass Spectrometry: a Surface-Analytical Study by XPS and AFM

    NASA Astrophysics Data System (ADS)

    Penna, Andrea; Careri, Maria; Spencer, Nicholas D.; Rossi, Antonella

    2015-08-01

    Since it was proposed for the first time, desorption electrospray ionization-mass spectrometry (DESI-MS) has been evaluated for applicability in numerous areas. Elucidations of the ionization mechanisms and the subsequent formation of isolated gas-phase ions have been proposed so far. In this context, the role of both surface and pneumatic effects on ion-formation yield has recently been investigated. Nevertheless, the effect of the surface chemistry has not yet been completely understood. Functionalized glass surfaces have been prepared, in order to tailor surface performance for ion formation. Three substrates were functionalized by depositing three different silanes [3-mercaptopropyltriethoxysilane (MTES), octyltriethoxysilane (OTES), and 1H,1H,2H,2H-perfluorooctyltriethoxy-silane (FOTES)] from toluene solution onto standard glass slides. Surface characterization was carried out by contact-angle measurements, tapping-mode atomic force microscopy, and X-ray photoelectron spectroscopy. Morphologically homogeneous and thickness-controlled films in the nm range were obtained, with surface free energies lying between 15 and 70 mJ/m2. These results are discussed, together with those of DESI-MS on low-molecular-weight compounds such as melamine, tetracycline, and lincomycin, also taking into account the effects of the sprayer potential and its correlation with surface wettability. The results demonstrate that ion-formation efficiency is affected by surface wettability, and this was demonstrated operating above and below the onset of the electrospray.

  1. Unexpected Analyte Oxidation during Desorption Electrospray Ionization - Mass Spectrometry

    SciTech Connect

    Pasilis, Sofie P; Kertesz, Vilmos; Van Berkel, Gary J

    2008-01-01

    During the analysis of surface spotted analytes using desorption electrospray ionization mass spectrometry (DESI-MS), abundant ions are sometimes observed that appear to be the result of oxygen addition reactions. In this investigation, the effect of sample aging, the ambient lab environment, spray voltage, analyte surface concentration, and surface type on this oxidative modification of spotted analytes, exemplified by tamoxifen and reserpine, during analysis by desorption electrospray ionization mass spectrometry was studied. Simple exposure of the samples to air and to ambient lighting increased the extent of oxidation. Increased spray voltage lead also to increased analyte oxidation, possibly as a result of oxidative species formed electrochemically at the emitter electrode or in the gas - phase by discharge processes. These oxidative species are carried by the spray and impinge on and react with the sampled analyte during desorption/ionization. The relative abundance of oxidized species was more significant for analysis of deposited analyte having a relatively low surface concentration. Increasing spray solvent flow rate and addition of hydroquinone as a redox buffer to the spray solvent were found to decrease, but not entirely eliminate, analyte oxidation during analysis. The major parameters that both minimize and maximize analyte oxidation were identified and DESI-MS operational recommendations to avoid these unwanted reactions are suggested.

  2. Transcriptome landscape of perennial wild Cicer microphyllum uncovers functionally relevant molecular tags regulating agronomic traits in chickpea

    PubMed Central

    Srivastava, Rishi; Bajaj, Deepak; Malik, Ayushi; Singh, Mohar; Parida, Swarup K.

    2016-01-01

    The RNA-sequencing followed by de-novo transcriptome assembly identified 11621 genes differentially xpressed in roots vs. shoots of a wild perennial Cicer microphyllum. Comparative analysis of transcriptomes between microphyllum and cultivated desi cv. ICC4958 detected 12772 including 3242 root- and 1639 shoot-specific microphyllum genes with 85% expression validation success rate. Transcriptional reprogramming of microphyllum root-specific genes implicates their possible role in regulating differential natural adaptive characteristics between wild and cultivated chickpea. The transcript-derived 5698 including 282 in-silico polymorphic SSR and 127038 SNP markers annotated at a genome-wide scale exhibited high amplification and polymorphic potential among cultivated (desi and kabuli) and wild accessions suggesting their utility in chickpea genomics-assisted breeding applications. The functional significance of markers was assessed based on their localization in non-synonymous coding and regulatory regions of microphyllum root-specific genes differentially expressed predominantly in ICC 4958 roots under drought stress. A high-density 490 genic SSR- and SNP markers-anchored genetic linkage map identified six major QTLs regulating drought tolerance-related traits, yield per plant and harvest-index in chickpea. The integration of high-resolution QTL mapping with comparative transcriptome profiling delineated five microphyllum root-specific genes with non-synonymous and regulatory SNPs governing drought-responsive yield traits. Multiple potential key regulators and functionally relevant molecular tags delineated can drive translational research and drought tolerance-mediated chickpea genetic enhancement. PMID:27680662

  3. High-speed tandem mass spectrometric in situ imaging by nanospray desorption electrospray ionization mass spectrometry.

    PubMed

    Lanekoff, Ingela; Burnum-Johnson, Kristin; Thomas, Mathew; Short, Joshua; Carson, James P; Cha, Jeeyeon; Dey, Sudhansu K; Yang, Pengxiang; Prieto Conaway, Maria C; Laskin, Julia

    2013-10-15

    Nanospray desorption electrospray ionization (nano-DESI) combined with tandem mass spectrometry (MS/MS), high-resolution mass analysis of the fragment ions (m/Δm = 17 500 at m/z 200), and rapid spectral acquisition enabled simultaneous imaging and identification of a large number of metabolites and lipids from 92 selected m/z windows (±1 Da) with a spatial resolution of better than 150 μm. Mouse uterine sections of implantation sites on day 6 of pregnancy were analyzed in the ambient environment without any sample pretreatment. MS/MS imaging was performed by scanning the sample under the nano-DESI probe at 10 μm/s, while higher-energy collision-induced dissociation (HCD) spectra were acquired for a targeted inclusion list of 92 m/z values at a rate of ∼6.3 spectra/s. Molecular ions and their corresponding fragments, separated by high-resolution mass analysis, were assigned on the basis of accurate mass measurement. Using this approach, we were able to identify and image both abundant and low-abundance isobaric and isomeric species within each m/z window. MS/MS analysis enabled efficient separation and identification of isomeric and isobaric phospholipids that are difficult to separate in full-scan mode. Furthermore, we identified several metabolites associated with early pregnancy and obtained the first 2D images of these molecules.

  4. Concept, implementation and commissioning of the automation system for the accelerator module test facility AMTF

    SciTech Connect

    Böckmann, Torsten A.; Korth, Olaf; Clausen, Matthias; Schoeneburg, Bernd

    2014-01-29

    The European XFEL project launched on June 5, 2007 will require about 103 accelerator modules as a main part of the XFEL linear accelerator. All superconducting components constituting the accelerator module like cavities and magnets have to be tested before the assembly. For the tests of the individual cavities and the complete modules an XFEL Accelerator Module Test Facility (AMTF) has been erected at DESY. The process control system EPICS (Experimental Physics and Industrial Control System) is used to control and operate the cryogenic plant and all its subcomponents. A complementary component of EPICS is the Open Source software suit CSS (Control System Studio). CSS is an integrated engineering, maintenance and operating tool for EPICS. CSS enables local and remote operating and monitoring of the complete system and thus represents the human machine interface. More than 250 PROFIBUS nodes work at the accelerator module test facility. DESY installed an extensive diagnostic and condition monitoring system. With these diagnostic tools it is possible to examine the correct installation and configuration of all PROFIBUS nodes in real time. The condition monitoring system based on FDT/DTM technology shows the state of the PROFIBUS devices at a glance. This information can be used for preventive maintenance which is mandatory for continuous operation of the AMTF facility. The poster will describe all steps form engineering to implementation and commissioning.

  5. The 3D Structure of the Proton

    NASA Astrophysics Data System (ADS)

    Kaiser, Ralf

    2012-09-01

    When Rutherford, Geiger and Marsden discovered the atomic nucleus in 1909 in Manchester, they at the same time also laid the foundations for the most successful method to study the structure of nuclei and nucleons. They found a point-like scattering centre inside the atom and identified it with the atomic nucleus and the theoretical description of this process has been known as Rutherford scattering ever since. The deviation between the theoretical description for a point-like scattering centre and experimental data has since been used to reveal information about the structure of the nucleus as well as the nucleon. There has been a continuous development from Hofstadters experiments in the 1950s, over the SLAC experiments in the 60s and 70s to the the HERA experiments at DESY and the experimental programme at Jeffersonlab. In this paper I am presenting the most recent results in Deeply Virtual Compton Scattering from the Hermes experiment at DESY, taken with a high density unpolarised target and a recoil detector in 2006/7.

  6. String formulation of space charge forces in a deflecting bunch

    NASA Astrophysics Data System (ADS)

    Talman, Richard

    2004-10-01

    The force between two moving point charges, because of its inverse square law singularity, cannot be applied directly in the numerical simulation of bunch dynamics; radiative effects make this especially true for short bunches being deflected by magnets. This paper describes a formalism circumventing this restriction in which the basic ingredient is the total force on a point charge comoving with a longitudinally aligned, uniformly charged string. Bunch evolution can then be treated using direct particle-to-particle, intrabeam scattering, with no need for an intermediate, particle-in-cell, step. Electric and magnetic fields do not appear individually in the theory. Since the basic formulas are both exact (in paraxial approximation) and fully relativistic, they are applicable to beams of all particle types and all energies. But the theory is expected to be especially useful for calculating the emittance growth of the ultrashort electron bunches of current interest for energy recovery linacs and free-electron lasers. The theory subsumes coherent synchrotron radiation and centrifugal space charge force. Renormalized, on-axis, longitudinal field components are in excellent agreement with values from Saldin et al. [DESY Report No. DESY-TESLA-FEL-96-14, 1995;

    Nucl. Instrum. Methods Phys. Res., Sect. ANIMAER0168-9002 417, 158 (1998).10.1016/S0168-9002(98)00623-8

  7. Desorption electrospray ionization mass spectrometry for high-throughput analysis of pharmaceutical samples in the ambient environment.

    PubMed

    Chen, Huanwen; Talaty, Nari N; Takáts, Zoltán; Cooks, R Graham

    2005-11-01

    Desorption electrospray ionization (DESI) allows mass spectrometry to be used for on-line high-throughput monitoring of pharmaceutical samples in the ambient environment, without prior sample preparation. Positive and negative ion DESI are used to characterize the active ingredients in pharmaceutical samples formulated as tablets, ointments, and liquids. Compounds of a wide variety of chemical types are detected in these complex matrices. The effects on analytical performance of operating parameters, including the electrospray high voltage, heated capillary temperature, solvent infusion rate, and solvent composition, are evaluated and optimized. In addition to experiments in which a simple solvent is sprayed onto the solid analyte samples, reactive desorption is performed by adding reagents to the solvent spray to generate particularly stable or characteristic ions with the analytes of interest. A variable-speed moving belt was built for high-throughput sampling and used to provide rapid qualitative and semiquantitative information on drug constituents in tablets. Sampling rates as high as 3 samples/s are achieved in the ambient environment. Relative standard deviations of the relative ion abundances for major components in the mass spectra are in the range of 2-8%. Impurities and components present at levels as low as approximately 0.1% are identified and carryover effects are minimized in high-throughput on-line analysis of pharmaceutical samples.

  8. Functionally Relevant Microsatellite Markers From Chickpea Transcription Factor Genes for Efficient Genotyping Applications and Trait Association Mapping

    PubMed Central

    Kujur, Alice; Bajaj, Deepak; Saxena, Maneesha S.; Tripathi, Shailesh; Upadhyaya, Hari D.; Gowda, C.L.L.; Singh, Sube; Jain, Mukesh; Tyagi, Akhilesh K.; Parida, Swarup K.

    2013-01-01

    We developed 1108 transcription factor gene-derived microsatellite (TFGMS) and 161 transcription factor functional domain-associated microsatellite (TFFDMS) markers from 707 TFs of chickpea. The robust amplification efficiency (96.5%) and high intra-specific polymorphic potential (34%) detected by markers suggest their immense utilities in efficient large-scale genotyping applications, including construction of both physical and functional transcript maps and understanding population structure. Candidate gene-based association analysis revealed strong genetic association of TFFDMS markers with three major seed and pod traits. Further, TFGMS markers in the 5′ untranslated regions of TF genes showing differential expression during seed development had higher trait association potential. The significance of TFFDMS markers was demonstrated by correlating their allelic variation with amino acid sequence expansion/contraction in the functional domain and alteration of secondary protein structure encoded by genes. The seed weight-associated markers were validated through traditional bi-parental genetic mapping. The determination of gene-specific linkage disequilibrium (LD) patterns in desi and kabuli based on single nucleotide polymorphism-microsatellite marker haplotypes revealed extended LD decay, enhanced LD resolution and trait association potential of genes. The evolutionary history of a strong seed-size/weight-associated TF based on natural variation and haplotype sharing among desi, kabuli and wild unravelled useful information having implication for seed-size trait evolution during chickpea domestication. PMID:23633531

  9. Personal Information from Latent Fingerprints Using Desorption Electrospray Ionization Mass Spectrometry and Machine Learning.

    PubMed

    Zhou, Zhenpeng; Zare, Richard N

    2017-01-17

    Desorption electrospray ionization-mass spectrometry imaging (DESI-MSI) was applied to latent fingerprints to obtain not only spatial patterns but also chemical maps. Samples with similar lipid compositions as those of the fingerprints were collected by swiping a glass slide across the forehead of consenting adults. A machine learning model called gradient boosting tree ensemble (GDBT) was applied to the samples that allowed us to distinguish between different genders, ethnicities, and ages (within 10 years). The results from 194 samples showed accuracies of 89.2%, 82.4%, and 84.3%, respectively. Specific chemical species that were determined by the feature selection of GDBT were identified by tandem mass spectrometry. As a proof-of-concept, the machine learning model trained on the sample data was applied to overlaid latent fingerprints from different individuals, giving accurate gender and ethnicity information from those fingerprints. The results suggest that DESI-MSI imaging of fingerprints with GDBT analysis might offer a significant advance in forensic science.

  10. Any Light Particle Search (ALPS)

    NASA Astrophysics Data System (ADS)

    Spector, Aaron; Any Light Particle Search (ALPS) Collaboration

    2016-03-01

    High power laser fields enabled by technologies developed for ground-based gravitational-wave observatories open up new opportunities for fundamental physics studies. One of these options is the search for axions and axion-like particles in a pure laboratory experiment. The axion is a solution to the strong CP-problem and a potential dark matter candidate. The axion has also been proposed as an additional channel to cool stars as well as a potential explanation for the TeV transparency problem. The German-US ALPS collaboration is setting up a light-shining-through-walls (LSW) experiment at DESY. LSW experiments are based on the simple idea that a high power laser field traversing a static magnetic field will transform partly into a relativistic axion field. This axion field will travel through an opaque wall into a second static magnetic field region where it turns partly back into an electromagnetic wave field with the same frequency as the laser. The ALPS collaboration is working towards a large scale LSW experiment at DESY in Hamburg, Germany. I will report on the status of the ALPS experiment. This work is supported by the Deutsche Forschungsgemeinschaft, PRISMA, the Helmholtz Association, the National Science Foundation and the Heising-Simons Foundation.

  11. Online Monitoring of Methanol Electro-Oxidation Reactions by Ambient Mass Spectrometry

    NASA Astrophysics Data System (ADS)

    Cheng, Si; Wu, Qiuhua; Dewald, Howard D.; Chen, Hao

    2016-08-01

    Online detection of methanol electro-oxidation reaction products [e.g., formaldehyde (HCHO)] by mass spectrometry (MS) is challenging, owing to the high salt content and extreme pH of the electrolyte solution as well as the difficulty in ionizing the reaction products. Herein we present an online ambient mass spectrometric approach for analyzing HCHO generated from methanol electro-oxidation, taking the advantage of high salt tolerance of desorption electrospray ionization mass spectrometry (DESI-MS). It was found that HCHO can be detected as PhNHNH+=CH2 (m/z 121) by DESI after online derivatization with PhNHNH2. With this approach, the analysis of HCHO from methanol electro-oxidation by MS was carried out not only in acidic condition but also in alkaline media for the first time. Efficiencies of different electrodes for methanol oxidation at different pHs were also evaluated. Our results show that Au electrode produces more HCHO than Pt-based electrodes at alkaline pH, while the latter have higher yields at acidic solution. The presented methodology would be of great value for elucidating fuel cell reaction mechanisms and for screening ideal fuel cell electrode materials.

  12. Transcriptome landscape of perennial wild Cicer microphyllum uncovers functionally relevant molecular tags regulating agronomic traits in chickpea.

    PubMed

    Srivastava, Rishi; Bajaj, Deepak; Malik, Ayushi; Singh, Mohar; Parida, Swarup K

    2016-09-29

    The RNA-sequencing followed by de-novo transcriptome assembly identified 11621 genes differentially xpressed in roots vs. shoots of a wild perennial Cicer microphyllum. Comparative analysis of transcriptomes between microphyllum and cultivated desi cv. ICC4958 detected 12772 including 3242 root- and 1639 shoot-specific microphyllum genes with 85% expression validation success rate. Transcriptional reprogramming of microphyllum root-specific genes implicates their possible role in regulating differential natural adaptive characteristics between wild and cultivated chickpea. The transcript-derived 5698 including 282 in-silico polymorphic SSR and 127038 SNP markers annotated at a genome-wide scale exhibited high amplification and polymorphic potential among cultivated (desi and kabuli) and wild accessions suggesting their utility in chickpea genomics-assisted breeding applications. The functional significance of markers was assessed based on their localization in non-synonymous coding and regulatory regions of microphyllum root-specific genes differentially expressed predominantly in ICC 4958 roots under drought stress. A high-density 490 genic SSR- and SNP markers-anchored genetic linkage map identified six major QTLs regulating drought tolerance-related traits, yield per plant and harvest-index in chickpea. The integration of high-resolution QTL mapping with comparative transcriptome profiling delineated five microphyllum root-specific genes with non-synonymous and regulatory SNPs governing drought-responsive yield traits. Multiple potential key regulators and functionally relevant molecular tags delineated can drive translational research and drought tolerance-mediated chickpea genetic enhancement.

  13. Desorption electrospray ionization-mass spectrometric analysis of low vapor pressure chemical particulates collected from a surface.

    PubMed

    Ewing, K J; Gibson, D; Sanghera, J; Miklos, F

    2015-01-01

    The collection of a low vapor pressure chemical simulant triethyl phosphate sorbed onto silica gel (TEP/SG) from a surface with subsequent analysis of the TEP/SG particulates using desorption electrospray ionization-mass spectrometry (DESI-MS) is described. Collection of TEP/SG particulates on a surface was accomplished using a sticky screen sampler composed of a stainless steel screen coated with partially polymerized polydimethylsiloxane (PDMS). DESI-MS analysis of TEP/SG particulates containing different percentages of TEP sorbed onto silica gel enabled the generation of response curves for the TEP ions m/z 155 and m/z 127. Using the response curves the calculation of the mass of TEP in a 25 wt% sample of TEP/SG was calculated, results show that the calculated mass of TEP was 14% different from the actual mass of TEP in the sample using the m/z 127 TEP ion response curve. Detection limits for the TEP vapor and TEP/SG particulates were calculated to be 4 μg and 6 particles, respectively.

  14. An Automated Platform for High-Resolution Tissue Imaging Using Nanospray Desorption Electrospray Ionization Mass Spectrometry

    SciTech Connect

    Lanekoff, Ingela T.; Heath, Brandi S.; Liyu, Andrey V.; Thomas, Mathew; Carson, James P.; Laskin, Julia

    2012-10-02

    An automated platform has been developed for acquisition and visualization of mass spectrometry imaging (MSI) data using nanospray desorption electrospray ionization (nano-DESI). The new system enables robust operation of the nano-DESI imaging source over many hours. This is achieved by controlling the distance between the sample and the probe by mounting the sample holder onto an automated XYZ stage and defining the tilt of the sample plane. This approach is useful for imaging of relatively flat samples such as thin tissue sections. Custom software called MSI QuickView was developed for visualization of large data sets generated in imaging experiments. MSI QuickView enables fast visualization of the imaging data during data acquisition and detailed processing after the entire image is acquired. The performance of the system is demonstrated by imaging rat brain tissue sections. High resolution mass analysis combined with MS/MS experiments enabled identification of lipids and metabolites in the tissue section. In addition, high dynamic range and sensitivity of the technique allowed us to generate ion images of low-abundance isobaric lipids. High-spatial resolution image acquired over a small region of the tissue section revealed the spatial distribution of an abundant brain metabolite, creatine, in the white and gray matter that is consistent with the literature data obtained using magnetic resonance spectroscopy.

  15. Draft genome sequence of Cicer reticulatum L., the wild progenitor of chickpea provides a resource for agronomic trait improvement

    PubMed Central

    Gupta, Sonal; Nawaz, Kashif; Parween, Sabiha; Roy, Riti; Sahu, Kamlesh; Kumar Pole, Anil; Khandal, Hitaishi; Srivastava, Rishi; Kumar Parida, Swarup

    2017-01-01

    Abstract Cicer reticulatum L. is the wild progenitor of the fourth most important legume crop chickpea (C. arietinum L.). We assembled short-read sequences into 416 Mb draft genome of C. reticulatum and anchored 78% (327 Mb) of this assembly to eight linkage groups. Genome annotation predicted 25,680 protein-coding genes covering more than 90% of predicted gene space. The genome assembly shared a substantial synteny and conservation of gene orders with the genome of the model legume Medicago truncatula. Resistance gene homologs of wild and domesticated chickpeas showed high sequence homology and conserved synteny. Comparison of gene sequences and nucleotide diversity using 66 wild and domesticated chickpea accessions suggested that the desi type chickpea was genetically closer to the wild species than the kabuli type. Comparative analyses predicted gene flow between the wild and the cultivated species during domestication. Molecular diversity and population genetic structure determination using 15,096 genome-wide single nucleotide polymorphisms revealed an admixed domestication pattern among cultivated (desi and kabuli) and wild chickpea accessions belonging to three population groups reflecting significant influence of parentage or geographical origin for their cultivar-specific population classification. The assembly and the polymorphic sequence resources presented here would facilitate the study of chickpea domestication and targeted use of wild Cicer germplasms for agronomic trait improvement in chickpea. PMID:27567261

  16. Differences between easy- and difficult-to-mill chickpea (Cicer arietinum L.) genotypes. Part II: protein, lipid and mineral composition.

    PubMed

    Wood, Jennifer A; Knights, Edmund J; Campbell, Grant M; Choct, Mingan

    2014-05-01

    Part I introduced the concept of easy- and difficult-to-mill chickpea genotypes, the broad chemical composition of their seed fractions and proposed mechanistic explanations for physical differences consistent with observed variation in milling ease. Part II continues this research by delving deeper into the amino acid, fatty acid and mineral components. No association between fatty acid composition and ease of milling was observed. However, particular amino acids and mineral elements were identified that further support roles of lectins, pectins and mineral-facilitated binding in the adhesion of chickpea seed coat and cotyledons. These differences suggest underlying mechanisms that could be exploited by breeding programmes to improve milling performance. This study shows that the content and composition of amino acids, fatty acids and minerals within different chickpea tissues vary with seed type (desi and kabuli) and within desi genotypes in ways that are consistent with physical explanations of how seed structure and properties relate to milling behaviour. © 2013 Society of Chemical Industry.

  17. Draft genome sequence of Cicer reticulatum L., the wild progenitor of chickpea provides a resource for agronomic trait improvement.

    PubMed

    Gupta, Sonal; Nawaz, Kashif; Parween, Sabiha; Roy, Riti; Sahu, Kamlesh; Kumar Pole, Anil; Khandal, Hitaishi; Srivastava, Rishi; Kumar Parida, Swarup; Chattopadhyay, Debasis

    2017-02-01

    Cicer reticulatum L. is the wild progenitor of the fourth most important legume crop chickpea (C. arietinum L.). We assembled short-read sequences into 416 Mb draft genome of C. reticulatum and anchored 78% (327 Mb) of this assembly to eight linkage groups. Genome annotation predicted 25,680 protein-coding genes covering more than 90% of predicted gene space. The genome assembly shared a substantial synteny and conservation of gene orders with the genome of the model legume Medicago truncatula. Resistance gene homologs of wild and domesticated chickpeas showed high sequence homology and conserved synteny. Comparison of gene sequences and nucleotide diversity using 66 wild and domesticated chickpea accessions suggested that the desi type chickpea was genetically closer to the wild species than the kabuli type. Comparative analyses predicted gene flow between the wild and the cultivated species during domestication. Molecular diversity and population genetic structure determination using 15,096 genome-wide single nucleotide polymorphisms revealed an admixed domestication pattern among cultivated (desi and kabuli) and wild chickpea accessions belonging to three population groups reflecting significant influence of parentage or geographical origin for their cultivar-specific population classification. The assembly and the polymorphic sequence resources presented here would facilitate the study of chickpea domestication and targeted use of wild Cicer germplasms for agronomic trait improvement in chickpea. © The Author 2016. Published by Oxford University Press on behalf of Kazusa DNA Research Institute.

  18. Interspecific variation in localization of hypericins and phloroglucinols in the genus Hypericum as revealed by desorption electrospray ionization mass spectrometry imaging.

    PubMed

    Kucharíková, Andrea; Kimáková, Katarína; Janfelt, Christian; Čellárová, Eva

    2016-05-01

    Plants of the genus Hypericum are widely known for their therapeutic properties. The most biologically active compounds of this genus are naphtodianthrones and phloroglucinols. Indirect desorption electrospray ionization mass spectrometry (DESI-MS) imaging allows visualization and localization of secondary metabolites in different plant tissues. This study is focused on localization of major secondary compounds in the leaves of 17 different in vitro cultured Hypericum species classified in 11 sections. Generally, all identified naphtodianthrones, protohypericin, hypericin, protopseudohypericin and pseudohypericin were co-localized in the dark glands of eight hypericin producing species at the site of their accumulation. The known phloroglucinols, hyperforin, adhyperforin, hyperfirin and some new phloroglucinols with m/z [M - H](-) 495 and 569 were localized in the translucent and pale cavities within the leaf in the majority of studied species. The comparison of different Hypericum species revealed an interspecific variation in the distribution of the dark and translucent glands corresponding with the localization of hypericins and phloroglucinols. Moreover, similarities in the localization and composition of the phloroglucinols were observed in the species belonging to the same section. Adding to various quantitative studies focused on the detection of secondary metabolites, this work using indirect DESI-MSI offers additional valuable information about localization of the above-mentioned compounds.

  19. Droplet dynamics and ionization mechanisms in desorption electrospray ionization mass spectrometry.

    PubMed

    Venter, Andre; Sojka, Paul E; Cooks, R Graham

    2006-12-15

    A droplet pickup and other mechanisms have been suggested for the ionization of biomolecules like peptides and proteins by desorption electrospray ionization. To verify this hypothesis phase Doppler particle analysis was used to study the sizes and velocities of droplets involved in DESI. It was found that impacting droplets typically have velocities of 120 m/s and average diameters of 2-4 microm. Small differences in sprayer construction influence the operating conditions at which droplets of these dimensions are produced. Under these conditions, the kinetic energy per impacting water molecule is less than 0.6 meV and sputtering through momentum transfer during collisions or ionization by other electronic processes is unlikely. Droplets arrive at the surface with velocities well below the speed of sound in common materials, thereby excluding the possibility of ionization by shockwave formation. Some droplets appear to roll along the surface, increasing contact time and presumably the amount of material that is taken up into droplets during conditions typical of the DESI experiment.

  20. FPGA-based klystron linearization implementations in scope of ILC

    NASA Astrophysics Data System (ADS)

    Omet, M.; Michizono, S.; Matsumoto, T.; Miura, T.; Qiu, F.; Chase, B.; Varghese, P.; Schlarb, H.; Branlard, J.; Cichalewski, W.

    2014-12-01

    We report the development and implementation of four FPGA-based predistortion-type klystron linearization algorithms. Klystron linearization is essential for the realization of ILC, since it is required to operate the klystrons 7% in power below their saturation. The work presented was performed in international collaborations at the Fermi National Accelerator Laboratory (FNAL), USA and the Deutsches Elektronen Synchrotron (DESY), Germany. With the newly developed algorithms, the generation of correction factors on the FPGA was improved compared to past algorithms, avoiding quantization and decreasing memory requirements. At FNAL, three algorithms were tested at the Advanced Superconducting Test Accelerator (ASTA), demonstrating a successful implementation for one algorithm and a proof of principle for two algorithms. The functionality of the algorithm implemented at DESY was demonstrated successfully in a simulation. Besides this, a proof of principle of an FPGA-based klystron and cavity simulator implemented at the High Energy Accelerator Research Organization (KEK), Japan, was demonstrated. Its purpose is to allow the development and test of digital LLRF control systems including klystron linearization algorithms when no actual klystron and cavity are available.