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Sample records for desy wissenschaftlicher jahresbericht

  1. Book Review: Wissenschaftliches Publizieren erlernen

    NASA Astrophysics Data System (ADS)

    Wiedemair, Christof; Sterken, Christiaan

    2012-10-01

    Book Review: Wissenschaftliches Publizieren erlernen: Wissenschaft ist wie Haute Cuisine - man muss seine Ergebnisse dem Leser stilvoll servieren. Science is like Haute Cuisine - results should be served in style to the reader. Review of "Scientific Writing for Young Astronomers", see 2011EAS....50.....S

  2. Detector developments at DESY.

    PubMed

    Wunderer, Cornelia B; Allahgholi, Aschkan; Bayer, Matthias; Bianco, Laura; Correa, Jonathan; Delfs, Annette; Göttlicher, Peter; Hirsemann, Helmut; Jack, Stefanie; Klyuev, Alexander; Lange, Sabine; Marras, Alessandro; Niemann, Magdalena; Pithan, Florian; Reza, Salim; Sheviakov, Igor; Smoljanin, Sergej; Tennert, Maximilian; Trunk, Ulrich; Xia, Qingqing; Zhang, Jiaguo; Zimmer, Manfred; Das, Dipayan; Guerrini, Nicola; Marsh, Ben; Sedgwick, Iain; Turchetta, Renato; Cautero, Giuseppe; Giuressi, Dario; Menk, Ralf; Khromova, Anastasiya; Pinaroli, Giovanni; Stebel, Luigi; Marchal, Julien; Pedersen, Ulrik; Rees, Nick; Steadman, Paul; Sussmuth, Mark; Tartoni, Nicola; Yousef, Hazem; Hyun, HyoJung; Kim, KyungSook; Rah, Seungyu; Dinapoli, Roberto; Greiffenberg, Dominic; Mezza, Davide; Mozzanica, Aldo; Schmitt, Bernd; Shi, Xintian; Krueger, Hans; Klanner, Robert; Schwandt, Joem; Graafsma, Heinz

    2016-01-01

    With the increased brilliance of state-of-the-art synchrotron radiation sources and the advent of free-electron lasers (FELs) enabling revolutionary science with EUV to X-ray photons comes an urgent need for suitable photon imaging detectors. Requirements include high frame rates, very large dynamic range, single-photon sensitivity with low probability of false positives and (multi)-megapixels. At DESY, one ongoing development project - in collaboration with RAL/STFC, Elettra Sincrotrone Trieste, Diamond, and Pohang Accelerator Laboratory - is the CMOS-based soft X-ray imager PERCIVAL. PERCIVAL is a monolithic active-pixel sensor back-thinned to access its primary energy range of 250 eV to 1 keV with target efficiencies above 90%. According to preliminary specifications, the roughly 10 cm × 10 cm, 3.5k × 3.7k monolithic sensor will operate at frame rates up to 120 Hz (commensurate with most FELs) and use multiple gains within 27 µm pixels to measure 1 to ∼100000 (500 eV) simultaneously arriving photons. DESY is also leading the development of the AGIPD, a high-speed detector based on hybrid pixel technology intended for use at the European XFEL. This system is being developed in collaboration with PSI, University of Hamburg, and University of Bonn. The AGIPD allows single-pulse imaging at 4.5 MHz frame rate into a 352-frame buffer, with a dynamic range allowing single-photon detection and detection of more than 10000 photons at 12.4 keV in the same image. Modules of 65k pixels each are configured to make up (multi)megapixel cameras. This review describes the AGIPD and the PERCIVAL concepts and systems, including some recent results and a summary of their current status. It also gives a short overview over other FEL-relevant developments where the Photon Science Detector Group at DESY is involved.

  3. The DESI fiber positioner system

    NASA Astrophysics Data System (ADS)

    Schubnell, Michael; Ameel, Jon; Besuner, Robert W.; Gershkovich, Irena; Heetderks, Henry D.; Hoerler, Philipp; Kneib, Jean-Paul; Heetderks, Henry D.; Silber, Joseph H.; Tarlé, Gregory; Weaverdyck, Curtis

    2016-08-01

    The Dark Energy Spectroscopic Instrument (DESI) is under construction to measure the expansion history of the Universe using the baryon acoustic oscillation technique. A new prime focus corrector for the KPNO Mayall telescope will deliver light to 5,000 fiber optic positioners feeding ten broad-band spectrographs. The positioners have eccentric axis kinematics. Actuation is provided by two 4mm diameter DC brushless gear-motors. An attached electronics board accepts a DC voltage for power and CAN messages for communications and drives the two motors. The positioner accepts the ferrulized and polished fiber and provides a mechanically safe path through its internal mechanism. Positioning is rapid and accurate with typical RMS errors of less than 5 μm.

  4. The FLASHForward facility at DESY

    NASA Astrophysics Data System (ADS)

    Aschikhin, A.; Behrens, C.; Bohlen, S.; Dale, J.; Delbos, N.; di Lucchio, L.; Elsen, E.; Erbe, J.-H.; Felber, M.; Foster, B.; Goldberg, L.; Grebenyuk, J.; Gruse, J.-N.; Hidding, B.; Hu, Zhanghu; Karstensen, S.; Knetsch, A.; Kononenko, O.; Libov, V.; Ludwig, K.; Maier, A. R.; Martinez de la Ossa, A.; Mehrling, T.; Palmer, C. A. J.; Pannek, F.; Schaper, L.; Schlarb, H.; Schmidt, B.; Schreiber, S.; Schwinkendorf, J.-P.; Steel, H.; Streeter, M.; Tauscher, G.; Wacker, V.; Weichert, S.; Wunderlich, S.; Zemella, J.; Osterhoff, J.

    2016-01-01

    The FLASHForward project at DESY is a pioneering plasma-wakefield acceleration experiment that aims to produce, in a few centimetres of ionised hydrogen, beams with energy of order GeV that are of quality sufficient to be used in a free-electron laser. The plasma is created by ionising a gas in a gas cell with a multi-TW laser system. The plasma wave will be driven by high-current-density electron beams from the FLASH linear accelerator. The laser system can also be used to provide optical diagnostics of the plasma and electron beams due to the <30 fs synchronisation between the laser and the driving electron beam. The project will explore both external and internal witness-beam injection techniques. The operation parameters of the experiment are discussed, as well as the scientific programme.

  5. Salt Tolerance of Desorption Electrospray Ionization (DESI)

    SciTech Connect

    Jackson, Ayanna U.; Talaty, Nari; Cooks, R G; Van Berkel, Gary J

    2007-01-01

    Suppression of ion intensity in the presence of high salt matrices is common in most mass spectrometry ionization techniques. Desorption electrospray ionization (DESI) is an ionization method that exhibits salt tolerance, and this is investigated. DESI analysis was performed on three different drug mixtures in the presence of 0, 0.2, 2, 5, 10, and 20% NaCl:KCl weight by volume from seven different surfaces. At physiological concentrations individual drugs in each mixture were observed with each surface. Collision-induced dissociation (CID) was used to provide additional confirmation for select compounds. Multiple stage experiments, to MS5, were performed for select compounds. Even in the absence of added salt, the benzodiazepine containing mixture yielded sodium and potassium adducts of carbamazepine which masked the ions of interest. These adducts were eliminated by adding 0.1% 7M ammonium acetate to the standard methanol:water (1:1) spray solvent. Comparison of the salt tolerance of DESI with that of electrospray ionization (ESI) demonstrated much better signal/noise characteristics for DESI in this study. The salt tolerance of DESI was also studied by performing limit of detection and dynamic range experiments. Even at a salt concentration significantly above physiological concentrations, select surfaces were effective in providing spectra that allowed the ready identification of the compounds of interest. The already high salt tolerance of DESI can be optimized further by appropriate choices of surface and spray solution.

  6. The DESI Wide Field Corrector Optics

    SciTech Connect

    Doel, Peter; Sholl, Michael J.; Liang, Ming; Brooks, David; Flaugher, Brenna; Gutierrez, Gaston; Kent, Stephen; Lampton, Michael; Miller, Timothy; Sprayberry, David

    2014-01-01

    The Dark Energy Spectroscopic instrument (DESI) is a 5000 fiber multi-object spectrometer system under development for installation on the National Optical Astronomy Observatory (NOAO) Kitt Peak 4m telescope (the Mayall telescope). DESI is designated to perform a 14,000° (square) galaxy and Quasi-Stellar Object (QSO) redshift survey to improve estimates of the dark energy equation of state. The survey design imposes numerous constraints on a prime focus corrector design, including field of view, geometrical blur, stability, fiber injection efficiency, zenith angle, mass and coast. The DESI baseline wide-field optical design described herein provides a 3.2 diameter field of view with six 0.8-1.14m diameter lenses and an integral atmospheric dispersion compensator.

  7. DESI focal plate mechanical integration and cooling

    NASA Astrophysics Data System (ADS)

    Lambert, A. R.; Besuner, R. W.; Claybaugh, T. M.; Silber, J. H.

    2016-08-01

    The Dark Energy Spectroscopic Instrument (DESI) is under construction to measure the expansion history of the Universe using the Baryon Acoustic Oscillation technique[1]. The spectra of 40 million galaxies over 14000 sq. deg will be measured during the life of the experiment. A new prime focus corrector for the KPNO Mayall telescope will deliver light to 5000 fiber optic positioners. The fibers in turn feed ten broad-band spectrographs. This paper describes the mechanical integration of the DESI focal plate and the thermal system design. The DESI focal plate is comprised of ten identical petal assemblies. Each petal contains 500 robotic fiber positioners. Each petal is a complete, self-contained unit, independent from the others, with integrated power supply, controllers, fiber routing, and cooling services. The major advantages of this scheme are: (1) supports installation and removal of complete petal assemblies in-situ, without disturbing the others, (2) component production, assembly stations, and test procedures are repeated and parallelizable, (3) a complete, full-scale prototype can be built and tested at an early date, (4) each production petal can be surveyed and tested as a complete unit, prior to integration, from the fiber tip at the focal surface to the fiber slit at the spectrograph. The ten petal assemblies will be installed in a single integration ring, which is mounted to the DESI corrector. The aluminum integration ring attaches to the steel corrector barrel via a flexured steel adapter, isolating the focal plate from differential thermal expansions. The plate scale will be kept stable by conductive cooling of the petal assembly. The guider and wavefront sensors (one per petal) will be convectively cooled by forced flow of air. Heat will be removed from the system at ten liquid-cooled cold plates, one per petal, operating at ambient temperature. The entire focal plate structure is enclosed in an insulating shroud, which serves as a thermal barrier

  8. DESI-GFA testbench facilities for CCDs characterization

    NASA Astrophysics Data System (ADS)

    Jiménez, Jorge; Illa, José M.; de Vicente, Juan; Casas, Ricard

    2016-08-01

    The DESI-GFA subsystem, used for Guiding, Focusing and Alignment, is one of the key parts for the DESI instrument (The Dark Energy Spectroscopic Instrument), planned for the Mayall 4-meter telescope at Kitt Peak National Observatory, Arizona, U.S. On this paper are presented the test bench facilities developed for the characterization of an e2v CCD230-42 CCD which is expected to be used at room temperature on each one of the ten small cameras composing the DESI-GFA system.

  9. Hydroforming of Tesla Cavities at Desy

    SciTech Connect

    W. Singer; H. Kaiser; X. Singer; I. Gonin; I. Zhelezov; T. Khabibullin; P. Kneisel; K. Saito

    2000-07-01

    Since several years the development of seamless niobium cavity fabrication by hydro forming is being pursued at DESY. This technique offers the possibility of lower cost of fabrication and perhaps better rf performance of the cavities because of the elimination of electron-beam welds, which in the standard fabrication technique have sometimes lead to inferior cavity performance due to defects. Several single cell 1300 MHz cavities have been formed from high purity seamless niobium tubes, which are under computer control expanded with internal pressure while simultaneously being swaged axially. The seamless tubes have been made by either back extrusion and flow forming or by spinning or deep drawing. Standard surface treatment techniques such as high temperature post purification, buffered chemical polishing (BCP), electropolishing (EP) and high pressure ultra pure water rinsing (HPR) have been applied to these cavities. The cavities exhibited high Q - values of 2 x 10{sup 10} at 2K and residual resistances as low as 3 n{Omega} after the removal of a surface layer of app. 100 {micro}m by BCP. Surprisingly, even at high gradients up to the maximum measured values of E{sub acc} {approx} 33 MV/m the Q-value did not decrease in the absence of field emission as often observed. After electropolishing of additional 100 {micro}m one of the cavities reached an accelerating gradient of E{sub acc} {ge} 42 MV/m.

  10. DESI systems engineering: throughput and signal-to-noise

    NASA Astrophysics Data System (ADS)

    Besuner, Robert W.; Sholl, Michael J.

    2016-08-01

    The Dark Energy Spectroscopic Instrument (DESI) is a fiber-fed multi-object spectroscopic instrument under construction to measure the expansion history of the Universe using the Baryon Acoustic Oscillation technique. Management of light throughput and noise in all elements of the instrument is key to achieving the high-level DESI science requirements over the planned survey area and depth within the planned survey duration. The DESI high-level science requirements flow down to instrument performance requirements on system throughput and operational efficiency. Signal-to-noise requirements directly affect minimum required exposure time per field, which dictates the pace and duration of the entire survey. The need to maximize signal (light throughput) and to minimize noise contributions and time overhead due to reconfigurations between exposures drives the instrument subsystem requirements and technical implementation. Throughput losses, noise contributors, and interexposure reconfiguration time are budgeted, tracked, and managed as DESI Systems Engineering resources. Current best estimates of throughput losses and noise contributions from each individual element of the instrument are tracked together in a master budget to calculate overall margin on completing the survey within the allotted time. That budget is a spreadsheet accessible to the entire DESI project.

  11. The Dark Energy Spectroscopic Instrument (DESI): The NOAO DECam Legacy Imaging Survey and DESI Target Selection

    NASA Astrophysics Data System (ADS)

    Schlegel, David J.; Blum, Robert D.; Castander, Francisco Javier; Dey, Arjun; Finkbeiner, Douglas P.; Foucaud, Sebastien; Honscheid, Klaus; James, David; Lang, Dustin; Levi, Michael; Moustakas, John; Myers, Adam D.; Newman, Jeffrey; Nord, Brian; Nugent, Peter E.; Patej, Anna; Reil, Kevin; Rudnick, Gregory; Rykoff, Eli S.; Ford Schlafly, Eddie; Stark, Casey; Valdes, Francisco; Walker, Alistair R.; Weaver, Benjamin; DECam Legacy Survey Collaboration

    2015-01-01

    The DECam Legacy Survey will conduct a 3-band imaging survey of the Sloan Digital Sky Survey (SDSS) extragalactic footprint. The Dark Energy Camera (DECam) will be used to image the 6700 square degree footprint overlapping SDSS in the region -20 < Dec < +30 deg, to depths of g=24.7, r=23.9, z=23.0. The survey will be conducted from Fall 2014 through Spring 2017, with periodic data releases beginning in March 2015. These releases will include catalogs constructed with the Tractor-based multi-wavelength forced photometry applied to the DECam and WISE satellite data.The Dark Energy Spectroscopic Instrument (DESI) will observe 24 million galaxies and quasars in a 14,000 square degree extragalactic footprint. The targeting in that footprint will be provided by a combination of these DECam data, the MOSAIC camera on the Mayall 4-meter, and the 90Prime camera on the Bok Telescope.

  12. Progress on the fabrication of the DESI corrector optics

    NASA Astrophysics Data System (ADS)

    Miller, Timothy N.; Doel, Peter; Brooks, David; Sholl, Michael J.; Levi, Michael E.

    2016-08-01

    The Dark Energy Spectroscopic Instrument (DESI) is under construction to measure the expansion history of the Universe using the Baryon Acoustic Oscillation technique. The spectra of 40 million galaxies over 14000 square degrees will be measured during the life of the experiment. A new prime focus corrector for the Kitt Peak National Observatory Mayall telescope will deliver light to 5000 fiber optic positioners. The fibers in turn feed ten broad-band spectrographs. We will describe the status of the DESI corrector optics, a series of 0.8 to 1.1-meter fused silica and borosilicate lenses currently being fabricated to demanding requirements. We will describe the specs for lenses that are finished or underway, including surface figure, homogeneity, and other parameters; the current schedule for lens production; and a comparison against DESI corrector requirements.

  13. Direct Analysis of Pharmaceutical Drugs Using Nano-DESI MS

    PubMed Central

    Cardoso-Palacios, Carlos

    2016-01-01

    Counterfeit pharmaceutical drugs imply an increasing threat to the global public health. It is necessary to have systems to control the products that reach the market and to detect falsified medicines. In this work, molecules in several pharmaceutical tablets were directly analyzed using nanospray desorption electrospray ionization mass spectrometry (nano-DESI MS). Nano-DESI is an ambient surface sampling technique which enables sampling of molecules directly from the surface of the tablets without any sample pretreatment. Both the active pharmaceutical ingredients (APIs) and some excipients were detected in all analyzed tablets. Principal component analysis was used to analyze mass spectral features from different tablets showing strong clustering between tablets with different APIs. The obtained results suggest nano-DESI MS as future tool for forensic analysis to discern APIs present in unknown tablet samples. PMID:27766177

  14. Coupling of Ultrafast LC with Mass Spectrometry by DESI

    NASA Astrophysics Data System (ADS)

    Cai, Yi; Liu, Yong; Helmy, Roy; Chen, Hao

    2014-10-01

    Recently we reported a desorption electrospray ionization (DESI) interface to combine liquid chromatography (LC) with mass spectrometry (MS) using a new LC eluent splitting strategy through a tiny orifice on LC capillary tube [ J. Am. Soc. Mass Spectrom. 25, 286 (2014)]. The interface introduces negligible dead volume and back pressure, thereby allowing "near real-time" MS detection, fast LC elution, and online MS-directed purification. This study further evaluates the LC/DESI-MS performance with focus of using ultra-fast LC. Using a monolithic C18 column, metabolites in urine can be separated within 1.6 min and can be online collected for subsequent structure elucidation (e.g., by NMR, UV, IR) in a recovery yield up to 99%. Using a spray solvent with alkaline pH, negative ions could be directly generated for acidic analytes (e.g., ibuprofen) in acidic LC eluent by DESI, offering a novel protocol to realize "wrong-way around" ionization for LC/MS analysis. In addition, DESI-MS is found to be compatible with ultra-performance liquid chromatography (UPLC) for the first time.

  15. Novel Aspects of the DESI Data Acquisition System

    NASA Astrophysics Data System (ADS)

    Beaufore, Lucas; Honscheid, Klaus; Elliott, Ann; Dark Energy Spectroscopic Instrument Collaboration

    2015-04-01

    The Dark Energy Spectroscopic Instrument (DESI) will measure the effect of dark energy on the expansion of the universe. It will obtain optical spectra for tens of millions of galaxies and quasars, constructing a 3-dimensional map spanning the nearby universe to 10 billion light years. The survey will be conducted on the Mayall 4-meter telescope at Kitt Peak National Observatory starting in 2018. In order to achieve these scientific goals the DESI collaboration is building a high throughput spectrograph capable of observing thousands of spectra simultaneously. In this presentation we discuss the DESI instrument control and data acquisition system that is currently being developed to operate the 5,000 fiber positioners in the focal plane, the 10 spectrographs each with three CDD cameras and every other aspect of the instrument. Special emphasis will be given to novel aspects of the design including the use of inexpensive Linux-based microcontrollers such as the Raspberry PI to control a number of DESI hardware components.

  16. Modulators for the S-band test linac at DESY

    NASA Astrophysics Data System (ADS)

    Bieler, M.; Choroba, S.; Hameister, J.; Lewin, H.-Ch.

    1995-07-01

    The development of adequate modulators for high peak power klystrons is one of the focus points for linear collider R&D programs. For the DESY/THD S-band linear collider study 150 MW rf-pulse power at 50 Hz repetition rate and 3 μs pulse duration is required [1]. Two different modulator schemes are under investigation. One is the conventional line type pulser, using a pulse forming network and a step up transformer, the other one is a hard tube pulser, using a dc power source at the full klystron voltage and a switch tube. This paper is focused on the modulator development for the S-band Test Linac at DESY. After a short overview over the test linac and a brief description of the 150 MW S-band klystron the circuitry of the line type pulse (LTP) is given. A hard tube pulser (HTP), which switches the high voltage directly from a storage capacitor to the klystron, has been built up at DESY. Circuitry and the results of the commissioning of the switch tube are reported.

  17. The alignment and assembly of the DESI prime focus corrector

    NASA Astrophysics Data System (ADS)

    Brooks, David; Doel, Peter; Besuner, Robert; Flaugher, Brenna; Gallo, Giuseppe; Gutierrez, Gaston; Kent, Stephen; Lampton, Michael; Levi, Michael; Liang, Ming; Miller, Timothy N.; Sprayberry, David; Stefanik, Andrew

    2016-08-01

    The Dark Energy Spectroscopic Instrument (DESI), which is currently under construction, is designed to measure the expansion history of the Universe using the Baryon Acoustic Oscillation technique. The spectra of 40 million galaxies over 14000 sq deg will be measured during the life of the experiment. A new prime focus corrector for the KPNO Mayall telescope will deliver light to 5000 fibre optic positioners. The fibres in turn feed ten broad-band spectrographs. The prime focus corrector for DESI consists of six lenses that range in diameter from 0.80 - 1.14 meters and from 83 - 237 kg in weight. The alignment of the large lenses of the optical corrector poses a significant challenge as in order to meet the fibre throughput requirements they have to be aligned to within a tolerance of 50 micrometres. This paper details the design for the cells that will hold the lenses and the alignment and assembly procedure for the mounting of the lenses into the cells and into the complete barrel assembly. This is based on the experience obtained from the alignment of the Dark Energy Camera (DECam) instrument which was successfully assembled and aligned by the same team and we include in the paper the lessons learnt and design modifications that will be implemented on the DESI system.

  18. Modulators for the S-band test linac at DESY

    SciTech Connect

    Bieler, M.; Choroba, S.; Hameister, J.; Lewin, H.

    1995-07-05

    The development of adequate modulators for high peak power klystrons is one of the focus points for linear collider R&D programs. For the DESY/THD S-band linear collider study 150 MW rf-pulse power at 50 Hz repetition rate and 3 {mu}s pulse duration is required [1]. Two different modulator schemes are under investigation. One is the conventional line type pulser, using a pulse forming network and a step up transformer, the other one is a hard tube pulser, using a dc power source at the full klystron voltage and a switch tube. This paper is focused on the modulator development for the S-band Test Linac at DESY. After a short overview over the test linac and a brief description of the 150 MW S-band klystron the circuitry of the line type pulse (LTP) is given. A hard tube pulser (HTP), which switches the high voltage directly from a storage capacitor to the klystron, has been built up at DESY. Circuitry and the results of the commissioning of the switch tube are reported. {copyright} {ital 1995} {ital American} {ital Institute} {ital of} {ital Physics}.

  19. Wissenschaftliche Abhandlungen

    NASA Astrophysics Data System (ADS)

    Boltzmann, Ludwig; Hasenöhrl, Friedrich

    2012-08-01

    Vorwort; 1. Über die Bewegung der Elektrzität in krummen Flächen; 2. Über die mechanische Bedeutung des zweiten Hauptsatzes der Wärmetheorie; 3. Über die Anzahl der Atome; 4. Über die Integrale linearer Differentialgleighungen; 5. Studien über das Gleichgewicht der lebendingen Kraft; 6. Lösung eines mechanischen Problems; 7. Über die Festigkeit zweier mit Druck übereinander gesteckter zylindrischer Röhren; 8. Über die elektrodynamische Wechselwirkung der Reile eines elektrishen Stromes von veränderlicher Gestalt; 9. Bemerkung zur Abhandlung des Herrn R. Most; 10. Erwiderung an Herrn Most; 11. Über die von bewegten Gasmassen geleistete Arbeit; 12. Noch einiges über Kohlrauschs Versuch; 13. Über die Ableitung der Grundgleichungen der Kapillarität; 14. Über eine neue optische Methode; 15. Boiling points of organic bodies; 16. Über die Druckkräfte, welche auf Ringe wriksam sind; 17. Zur Priorität der Auffindung der Beziehung zwischen dem zweiten Hauptsatze der mechanischen Wärmetheorie; 18. Über das Wärmegleichgewicht zwischen mehratomigen Gasmolekülen; 19. Einige allgemeine Sätze über Wärmegleichgewicht; 20. Analytischer Beweis des zweiten Hauptsatzen der mechanischen Wärmetheorie; 21. Über das Wirkungsgesetz der Molekülarkräfte; 22. Weiteren Studien über das Wärmegleichgewicht unter Gasmolekülen; 23. Resultate einer Experimentaluntersuchung; 24. Experimentelle Bestimmung der Dielektrizitätskonstante von Isolatoren; 25. Experimentaluntersuchung über die elektrostatische Fernwirkung dielektrischer Körper; 26. Experimentelle Bestimmung der Dielektrizitätskonstante einiger Gase; 27. Über einige an meinen Versuchen; 28. Über die Verschiedenheit der Dielektrizitätskonstante des Körper unter dem Einflusse elektrische Kräfte; 29. Experimentaluntersuchung über das Verhalten nicht leitender Körper unter dem Einflusse electrischer Kräfte; 30. Zur Theorie der elastische Nachwirkung; 31. Über den Zusammenhang zwischen der Drehung der Polarisationsebene und der Wellenlänge der verschiedenen Farben.

  20. Fiber system design for the Dark Energy Spectroscopic Instrument (DESI)

    NASA Astrophysics Data System (ADS)

    Poppett, Claire; Sharples, Ray; Edelstein, Jerry; Schmoll, Jürgen; Bramall, David; Fagrelius, Parker

    2016-08-01

    The Dark Energy Spectroscopic Instrument (DESI) is under construction to measure the expansion history of the Universe using the Baryon Acoustic Oscillation technique. The spectra of 40 million galaxies over 14000 sq deg will be measured during the life of the experiment. A new prime focus corrector for the KPNO Mayall telescope will deliver light to 5000 fiber optic positioners. The fibers in turn feed ten broad-band spectrographs. We will describe the Fiber Systems design with specific emphasis on novel approaches and essential elements that lead to exceptional performance.

  1. The European XFEL Free Electron Laser at DESY

    ScienceCinema

    Weise, Hans [Deutsches Elektronen-Synchrotron, Germany

    2016-07-12

    The European X-ray Free-Electron laser Facility (XFEL) is going to be built in an international collaboration at the Deutsches Elektronen-Synchrotron (DESY), Germany, and the Technical Design Report was published in 2006. The official project is expected for summer 2007. This new facility will offer photon beams at wavelengths as short as 1 angstrom with highest peak brilliance being more than 100 million times higher than present day synchrotron radiation sources. The radiation has a high degree of transverse coherence and the pulse duration is reduced from {approx}100 picoseconds (typ. for SR light sources) down to the {approx}10 femtosecond time domain. The overall layout of the XFEL will be described. This includes the envisaged operation parameters for the linear accelerator using superconducting TESLA technology. The complete design is based on the actually operated FLASH free-electron laser at DESY. Experience with the operation during first long user runs at wavelengths from 30 to 13 nm will be described in detail.

  2. Detecting Cheatgrass on the Colorado Plateau using Landsat data: A tutorial for the DESI software

    USGS Publications Warehouse

    Kokaly, Raymond F.

    2011-01-01

    Invasive plant species disrupt native ecosystems and cause economic harm to public lands. In this report, an example of applying the Detection of Early Season Invasives software to mapping cheatgrass infestations is given. A discussion of each step of the DESI process is given, including selection of Landsat images. Tutorial data, covering a semi-arid area in southern Utah, are distributed with this report. Tips on deriving the inputs required to run DESI are provided. An approach for evaluating and adjusting detection parameters by examining interim products of DESI is discussed.

  3. Integration and testing of the DESI spectrograph prototype

    NASA Astrophysics Data System (ADS)

    Perruchot, S.; Secroun, A.; Blanc, P.-E.; Ronayette, S.; Régal, X.; Castagnoli, G.; Le Van Suu, A.; Ealet, A.; Cuby, J.-G.; Elliot, A.; Honscheid, K.; Jelinsky, P.

    2016-08-01

    The Dark Energy Spectroscopic Instrument (DESI) is under construction to measure the expansion history of the Universe using the Baryon Acoustic Oscillation probe. The KPNO Mayall telescope will deliver light to 5000 fibers feeding ten broadband spectrographs. A consortium of Aix-Marseille University (AMU) and CNRS laboratories (LAM, OHP and CPPM) together with the WINLIGHT Systems company (Pertuis-France) has committed to integrate and validate the performance requirements of the full spectrographs, equipped with their cryostats, shutters and other mechanisms. An AIT plan has been defined and dedicated test equipment has been designed and implemented. This equipment simulates the fiber input illumination from the telescope, and offers a variety of continuum and line sources. Flux levels are adjustable and can illuminate one or several fibers along the test slit. It is fully remotely controlled and interfaced to the Instrument Control System. Specific analysis tools have also been developed to verify and monitor the performance and stability of the spectrographs. All these developments are described in details.

  4. The DESI shutter with integrated fiber illumination system

    NASA Astrophysics Data System (ADS)

    Derwent, Mark A.; O'Brien, Thomas P.; Pappalardo, Daniel P.; Martini, Paul; Coker, Carl T.; Pogge, Richard W.

    2016-08-01

    The Dark Energy Spectroscopic Instrument (DESI) is under construction to measure the expansion history of the Universe using the Baryon Acoustic Oscillation technique. The spectra of 40 million galaxies over 14,000 sq deg will be measured during the life of the experiment. A new prime focus corrector for the KPNO Mayall telescope will deliver light to 5000 fiber optic positioners. The fibers in turn feed ten broad-band spectrographs. We describe the unique shutter design that incorporates a fiber illumination system into the shutter blade. When activated, the fiber illumination system directs intense 430-480nm wavelength light at the instrument's fiber slit in order to back-illuminate the telescope's focal plane and verify the location of the robotic fiber positioners. The back-illumination is typically active during science exposure read-outs and therefore requires the shutter to attenuate light by a factor of at least 107. This paper describes how we have integrated the fiber illumination system into the shutter blade, as well as incorporated an inflatable seal around the shutter aperture to achieve the light attenuation requirement. We also present lab results that characterize the fiber illumination and shutter attenuation. Finally, we discuss the control scheme that executes exposure and fiber illumination modes, and meets the shutter timing requirements.

  5. The Dark Energy Spectroscopic Instrument (DESI) instrument mechanism control systems

    NASA Astrophysics Data System (ADS)

    Coker, Carl T.; Pappalardo, Daniel; Pogge, Richard; Martini, Paul; Derwent, Mark; O'Brien, Thomas P.; Honscheid, Klaus

    2016-08-01

    The Dark Energy Spectroscopic Instrument (DESI) is under construction to measure the expansion history of the Universe using the Baryon Acoustic Oscillation technique. The spectra of 40 million galaxies over 14,000 sq deg will be measured during the life of the experiment. A new prime focus corrector for the KPNO Mayall telescope will deliver light to 5,000 fiber optic positioners. The fibers in turn feed ten broad-band spectrographs. We present the design details of the instrument mechanism control systems for the spectrographs. Each spectrograph has a stand-alone mechanism control box that operates the unit's four remotely-operated mechanisms (two shutters and two Hartmannn doors), and provides a suite of temperature and humidity sensors. Each control box is highly modular, and is operated by a dedicated on-board Linux computer to provide all of the control and monitoring functions. We describe our solution for integrating a number of network-connected devices within each unit spectrograph, and describe the basic software architecture.

  6. Communication architecture system for fiber positioning of DESI spectrograph

    NASA Astrophysics Data System (ADS)

    Kaci, Karim; Glez-de-Rivera, Guillermo; Lopez-Colino, Fernando; Martinez-Garcia, M. Sofia; Masa, Jose L.; Garrido, Javier; Sanchez, Justo; Prada, Francisco

    2016-07-01

    This paper presents a design proposal for controlling the five thousand fiber positioners within the focal plate of the DESI instrument. Each of these positioners is a robot which allows positioning its optic fiber with a resolution within the range of few microns. The high number and density of these robots poses a challenge for handling the communication from a central control device to each of these five thousand. Furthermore, an additional restriction applies as the required time to communicate to every robot of its position must be smaller than a second. Additionally. a low energy consumption profile is also desired. Both wireless and wired communication protocols have been evaluated, proposing single-technology-based architectures and hybrid ones (a combination of them). Among the wireless solutions, ZigBee and CyFi have been considered. Using simulation tools these wireless protocols have been discarded as they do not allow an efficient communication. The studied wired protocols comprise I2C, CAN and Ethernet. The best solution found is a hybrid multilayer architecture combining both Ethernet and I2C. A 100 Mbps Ethernet based network is used to communicate the central control unit with ten management boards. Each of these boards is a low-cost, low-power embedded device that manages a thirty six degrees sector of the sensing plate. Each of these boards receives the positioning data for five hundred robots and communicate with each one through a fast mode plus I2C bus. This proposal allows to communicate the positioning information for all five thousand robots in 350 ms total.

  7. The New Hyperspectral Sensor Desis on the Multi-Payload Platform Muses Installed on the Iss

    NASA Astrophysics Data System (ADS)

    Müller, R.; Avbelj, J.; Carmona, E.; Eckardt, A.; Gerasch, B.; Graham, L.; Günther, B.; Heiden, U.; Ickes, J.; Kerr, G.; Knodt, U.; Krutz, D.; Krawczyk, H.; Makarau, A.; Miller, R.; Perkins, R.; Walter, I.

    2016-06-01

    The new hyperspectral instrument DLR Earth Sensing Imaging Spectrometer (DESIS) will be developed and integrated in the Multi-User-System for Earth Sensing (MUSES) platform installed on the International Space Station (ISS). The DESIS instrument will be launched to the ISS mid of 2017 and robotically installed in one of the four slots of the MUSES platform. After a four month commissioning phase the operational phase will last at least until 2020. The MUSES / DESIS system will be commanded and operated by the publically traded company TBE (Teledyne Brown Engineering), which initiated the whole program. TBE provides the MUSES platform and the German Aerospace Center (DLR) develops the instrument DESIS and establishes a Ground Segment for processing, archiving, delivering and calibration of the image data mainly used for scientific and humanitarian applications. Well calibrated and harmonized products will be generated together with the Ground Segment established at Teledyne. The article describes the Space Segment consisting of the MUSES platform and the instrument DESIS as well as the activities at the two (synchronized) Ground Segments consisting of the processing methods, product generation, data calibration and product validation. Finally comments to the data policy are given.

  8. Qualitative analysis of seized cocaine samples using desorption electrospray ionization- mass spectrometry (DESI-MS).

    PubMed

    Stojanovska, Natasha; Tahtouh, Mark; Kelly, Tamsin; Beavis, Alison; Fu, Shanlin

    2015-05-01

    Desorption electrospray ionization - mass spectrometry (DESI-MS) is a useful technique for the qualitative analysis of compounds found in seized drug material. In this study, DESI-MS was utilized in the screening analysis of illicit cocaine samples. The technique was also applied to the geographical origin determination of these samples. The limit of detection was determined to be 24.3 µg (or 3.47 µg/mm(2) ) and the analysis time was less than 1 minute per sample. The intra-day and inter-day precision for the detection of cocaine was 11 % and 42 %, respectively; therefore the quantitative data provided by DESI-MS was limited in its use for accurate determination of cocaine concentration in a sample. Using the quadrupole time-of-flight (QTOF) mass spectrometer, the presence of cocaine and impurities detected were confirmed by accurate tandem MS data. The qualitative chemical profiles obtained using DESI-MS were compared to two popular analysis techniques, GC-MS and LC-MS. The effects of a range of adulterants including caffeine, procaine, levamisole, lignocaine, paracetamol, and atropine on the detectability of cocaine were also investigated. It was found that the addition of these adulterants in a cocaine sample did not prevent the detection of the analyte itself (there was slight enhancement in some samples), which was useful in drug detection. The detection of truxillines in the seized samples by DESI-MS aided in the preliminary determination of geographical origin, i.e., Bolivian, Peruvian or Colombian leaf origin. The application of DESI-MS to the qualitative analysis and screening of seized cocaine samples demonstrates the potential and applicability of the technique to the fast chemical profiling of illicit samples.

  9. Forensic applications of desorption electrospray ionisation mass spectrometry (DESI-MS).

    PubMed

    Morelato, Marie; Beavis, Alison; Kirkbride, Paul; Roux, Claude

    2013-03-10

    Desorption electrospray ionisation mass spectrometry (DESI-MS) is an emerging analytical technique that enables in situ mass spectrometric analysis of specimens under ambient conditions. It has been successfully applied to a large range of forensically relevant materials. This review assesses and highlights forensic applications of DESI-MS including the analysis and detection of illicit drugs, explosives, chemical warfare agents, inks and documents, fingermarks, gunshot residues and drugs of abuse in urine and plasma specimens. The minimal specimen preparation required for analysis and the sensitivity of detection achieved offer great advantages, especially in the field of forensic science.

  10. Studies for a beam trajectory monitor for TTF-FEL at DESY

    SciTech Connect

    Mueller, Ute Carina

    1997-06-01

    A beam trajectory monitor for the FEL at the TESLA test facility at DESY has been proposed for the reconstruction of the electron beam trajectory by observing the spontaneous undulator radiation along the beam using the pinhole camera principle. Simulations for this concept have been performed and results are presented here.

  11. ProtoDESI: risk reduction experiment for the Dark Energy Spectroscopic Instrument

    NASA Astrophysics Data System (ADS)

    Fagrelius, Parker; Baltay, Charles; Bebek, Christopher; Besuner, Robert; Castander, Francisco J.; Dey, Arjun; Buckley-Geer, Elizabeth; Elliott, Ann; Emmet, William; Flaugher, Brenna; Gershkovich, Irena; Honscheid, Klaus; Joyce, Dick; Kent, Stephen; Marshall, Robert; Probst, Ronald; Rabinowitz, David; Reil, Kevin; Schlegel, David; Schubnell, Michael; Serrano, Santiago; Silber, Joseph; Sprayberry, David; Tarle, Greg

    2016-08-01

    The Dark Energy Spectroscopic Instrument (DESI) is under construction to measure the expansion history of the Universe using the Baryon Acoustic Oscillation technique. The spectra of 40 million galaxies over 14,000 sq. deg. will be measured during the life of the experiment. A new prime focus corrector for the KPNO Mayall telescope will deliver light to 5000 fiber optic positioners. The fibers in turn feed ten broad-band spectrographs. We describe the ProtoDESI experiment, planned for installation and commissioning at the Mayall telescope in the fall of 2016, which will test the fiber positioning system for DESI. The ProtoDESI focal plate, consisting of 10 fiber positioners, illuminated fiducials, and a guide, focus and alignment (GFA) sensor module, will be installed behind the existing Mosaic prime focus corrector. A Fiber View Camera (FVC) will be mounted to the lower surface of the primary mirror cell and a subset of the Instrument Control System (ICS) will control the ProtoDESI subsystems, communicate with the Telescope Control System (TCS), and collect instrument monitoring data. Short optical fibers from the positioners will be routed to the back of the focal plane where they will be imaged by the Fiber Photometry Camera (FPC) or back-illuminated by a LED system. Target objects will be identified relative to guide stars, and using the GFA in a control loop with the ICS/TCS system, the guide stars will remain stable on pre-identified GFA pixels. The fiber positioners will then be commanded to the target locations and placed on the targets iteratively, using the FVC to centroid on back-illuminated fibers and fiducials to make corrective delta motions. When the positioners are aligned with the targets on-sky, the FPC will measure the intensities from the positioners' fibers which can then be dithered to look for intensity changes, indicating how well the fibers were initially positioned on target centers. The final goal is to operate ProtoDESI on the Mayall

  12. Stray light assessment and mitigation for the DESI front-end optical system

    NASA Astrophysics Data System (ADS)

    Miller, Timothy N.; Lampton, Michael; Besuner, Robert W.; Sholl, Michael J.; Liang, Ming; Ellis, Scott

    2016-08-01

    The Dark Energy Spectroscopic Instrument (DESI) is under construction to measure the expansion history of the Universe, using the Baryon Acoustic Oscillation technique and the growth of structure using redshift-space distortions (RSD). The spectra of 40 million galaxies over 14000 square degrees will be measured during the life of the experiment. A new prime focus corrector for the KPNO Mayall telescope will deliver light to 5000 fiber optic positioners. The fibers in turn feed ten broad-band spectrographs. We will describe modeling and mitigation of stray light within the front end of DESI, consisting of the Mayall telescope and the corrector assembly. This includes the creation of a stray light model, quantitative analysis of the unwanted light at the corrector focal surface, identification of the main scattering sources, and a description of mitigation strategies to remove the sources.

  13. Improved DESI-MS Performance using Edge Sampling and aRotational Sample Stage

    SciTech Connect

    Kertesz, Vilmos; Van Berkel, Gary J

    2008-01-01

    The position of the surface to be analyzed relative to the sampling orifice or capillary into the mass spectrometer has been known to dramatically affect the observed signal levels in desorption electrospray ionization mass spectrometry (DESIMS). In analyses of sample spots on planar surfaces, DESI-MS signal intensities as much as five times greater were routinely observed when the bottom of the sampling capillary was appropriately positioned beneath the surface plane ( edge sampling") compared to when the capillary just touched the surface. To take advantage of the optimum "edge sampling" geometry and to maximize the number of samples that could be analyzed in this configuration, a rotational sample stage was integrated into a typical DESI-MS setup. The rapid quantitative determination of caffeine in two diet sport drinks (Diet Turbo Tea, Speed Stack Grape) spiked with an isotopically labeled internal standard demonstrated the utility of this approach.

  14. Test Sequence for Superconducting XFEL Cavities in the Accelerator Module Test Facility (AMTF) at DESY

    NASA Astrophysics Data System (ADS)

    Schaffran, J.; Petersen, B.; Reschke, D.; Swierblewski, J.

    The European XFEL is a new research facility currently under construction at DESY in the Hamburg area in Germany. From 2016 onwards, it will generate extremely intense X-ray flashes that will be used by researchers from all over the world. The main part of the superconducting European XFEL linear accelerator consists of 100 accelerator modules with 800 RF-cavities inside. The accelerator modules, superconducting magnets and cavities will be tested in the accelerator module test facility (AMTF) at DESY. This paper gives an overview of the test sequences for the superconducting cavities, applied in the preparation area and at the two cryostats (XATC) of the AMTF-hall, and describes the complete area. In addition it summarizes the tests and lessons learnt until the middle of 2014.

  15. Molecular architecture of DesI: a key enzyme in the biosynthesis of desosamine.

    PubMed

    Burgie, E Sethe; Holden, Hazel M

    2007-08-07

    Desosamine is a 3-(dimethylamino)-3,4,6-trideoxyhexose found, for example, in such macrolide antibiotics as erthyromycin, azithromycin, and clarithromycin. The efficacies of these macrolide antibiotics are markedly reduced in the absence of desosamine. In the bacterium Streptomyces venezuelae, six enzymes are required for the production of dTDP-desosamine. The focus of this X-ray crystallographic analysis is the third enzyme in the pathway, a PLP-dependent aminotransferase referred to as DesI. The structure of DesI was solved in complex with its product, dTDP-4-amino-4,6-dideoxyglucose, to a nominal resolution of 2.1 A. Each subunit of the dimeric enzyme contains 12 alpha-helices and 14 beta-strands. Three cis-peptides are observed in each subunit, Phe 330, Pro 332, and Pro 339. The two active sites of the enzyme are located in clefts at the subunit/subunit interface. Electron density corresponding to the bound product clearly demonstrates a covalent bond between the amino group of the product and C-4' of the PLP cofactor. Interestingly, there are no hydrogen-bonding interactions between the protein and the dideoxyglucosyl group of the product (within 3.2 A). The only other sugar-modifying aminotransferase whose structure is known in the presence of product is PseC from Helicobacter pylori. This enzyme, as opposed to DesI, catalyzes amino transfer to the axial position of the sugar. A superposition of the two active sites for these proteins reveals that the major differences in ligand binding occur in the orientations of the deoxyglucosyl and phosphoryl groups. Indeed, the nearly 180 degrees difference in hexose orientation explains the equatorial versus axial amino transfer exhibited by DesI and PseC, respectively.

  16. Rapid Analysis of Chemical Warfare Agents and Their Hydrolysis Products by Desorption Electrospray Ionization Mass Spectrometry (DESI-MS)

    DTIC Science & Technology

    2009-10-01

    microextraction (SPME) sampling and DESI-MS analysis or liquid chromatographic electrospray ionization mass spectrometric (LC-ESI-MS) analysis. The...sample pre- treatment, resulting in a significant increase in sample throughput over conventional solid phase microextraction (SPME) sampling and DESI...methods based on solid phase microextraction (SPME) sampling followed by gas chromatography-mass spectrometry GC-MS analysis [35-43] and direct

  17. DESI-MS/MS of Chemical Warfare Agents and Related Compounds

    NASA Astrophysics Data System (ADS)

    D'Agostino, Paul A.

    Solid phase microextraction (SPME) fibers were used to headspace ­sample chemical warfare agents and their hydrolysis products from glass vials and glass vials containing spiked media, including Dacron swabs, office carpet, paper and fabric. The interface of the Z-spray source was modified to permit safe introduction of the SPME fibers for desorption electrospray ionization mass spectrometric (DESI-MS) analysis. A "dip and shoot" method was also developed for the rapid sampling and DESI-MS analysis of chemical warfare agents and their hydrolysis products in liquid samples. Sampling was performed by simply dipping fused silica, stainless steel or SPME tips into the organic or aqueous samples. Replicate analyses were completed within several minutes under ambient conditions with no sample pre-treatment, resulting in a significant increase in sample throughput. The developed sample handling and analysis method was applied to the determination of chemical warfare agent content in samples containing unknown chemical and/or biological warfare agents. Ottawa sand was spiked with sulfur mustard, extracted with water and autoclaved to ensure sterility. Sulfur mustard was completely hydrolysed during the extraction/autoclave step and thiodiglycol was identified by DESI-MS, with analyses generally being completed within 1 min using the "dip and shoot" method.

  18. An advanced draft genome assembly of a desi type chickpea (Cicer arietinum L.).

    PubMed

    Parween, Sabiha; Nawaz, Kashif; Roy, Riti; Pole, Anil K; Venkata Suresh, B; Misra, Gopal; Jain, Mukesh; Yadav, Gitanjali; Parida, Swarup K; Tyagi, Akhilesh K; Bhatia, Sabhyata; Chattopadhyay, Debasis

    2015-08-11

    Chickpea (Cicer arietinum L.) is an important pulse legume crop. We previously reported a draft genome assembly of the desi chickpea cultivar ICC 4958. Here we report an advanced version of the ICC 4958 genome assembly (version 2.0) generated using additional sequence data and an improved genetic map. This resulted in 2.7-fold increase in the length of the pseudomolecules and substantial reduction of sequence gaps. The genome assembly covered more than 94% of the estimated gene space and predicted the presence of 30,257 protein-coding genes including 2230 and 133 genes encoding potential transcription factors (TF) and resistance gene homologs, respectively. Gene expression analysis identified several TF and chickpea-specific genes with tissue-specific expression and displayed functional diversification of the paralogous genes. Pairwise comparison of pseudomolecules in the desi (ICC 4958) and the earlier reported kabuli (CDC Frontier) chickpea assemblies showed an extensive local collinearity with incongruity in the placement of large sequence blocks along the linkage groups, apparently due to use of different genetic maps. Single nucleotide polymorphism (SNP)-based mining of intra-specific polymorphism identified more than four thousand SNPs differentiating a desi group and a kabuli group of chickpea genotypes.

  19. The DESI Experiment Part I: Science,Targeting, and Survey Design

    SciTech Connect

    Aghamousa, Amir; et al.

    2016-10-31

    DESI (Dark Energy Spectroscopic Instrument) is a Stage IV ground-based dark energy experiment that will study baryon acoustic oscillations (BAO) and the growth of structure through redshift-space distortions with a wide-area galaxy and quasar redshift survey. To trace the underlying dark matter distribution, spectroscopic targets will be selected in four classes from imaging data. We will measure luminous red galaxies up to $z=1.0$. To probe the Universe out to even higher redshift, DESI will target bright [O II] emission line galaxies up to $z=1.7$. Quasars will be targeted both as direct tracers of the underlying dark matter distribution and, at higher redshifts ($ 2.1 < z < 3.5$), for the Ly-$\\alpha$ forest absorption features in their spectra, which will be used to trace the distribution of neutral hydrogen. When moonlight prevents efficient observations of the faint targets of the baseline survey, DESI will conduct a magnitude-limited Bright Galaxy Survey comprising approximately 10 million galaxies with a median $z\\approx 0.2$. In total, more than 30 million galaxy and quasar redshifts will be obtained to measure the BAO feature and determine the matter power spectrum, including redshift space distortions.

  20. Microtomography using synchrotron radiation at DESY: current status and future developments

    NASA Astrophysics Data System (ADS)

    Beckmann, Felix; Donath, Tilman; Dose, Thomas; Lippmann, Thomas; Martins, Rene V.; Metge, Joachim; Schreyer, Andreas

    2004-10-01

    The X-ray microtomography system which is operated at the Hamburger Synchrotronstrahlungslabor HASYLAB of the Deutsches Elektronen-Synchrotron DESY in Hamburg, Germany, is presented. At the DORIS storage ring synchrotron radiation at the wiggler beamlines BW2, W2, and BW5 was used to run the microtomography apparatus as a user experiment. The development of tomography scanning techniques to investigate samples which are larger than the field of view of the X-ray detector is demonstrated for dental implants using the photon energy of 90 keV at the high energy beamline BW5. In cooperation with DESY the GKSS Research Center is setting up the high energy beamline HARWI-2 at the DORIS storage ring of DESY. This beamline will allow for tomography experiments using monochromatic X-rays from 20 to 200 keV with a beam size of 70×10 mm2. Furthermore the GKSS is operating a neutron radiography facility GENRA at the research reactor Geesthacht FRG, Geesthacht, Germany. It is intended to extend this facility by a tomography station. The combination of synchrotron radiation based microtomography with neutron tomography will allow for the development of new techniques to give new insight in the 3-dim. behavior of samples especially in materials science.

  1. Differential response of kabuli and desi chickpea genotypes toward inoculation with PGPR in different soils

    PubMed Central

    Imran, Asma; Mirza, Muhammad S.; Shah, Tariq M.; Malik, Kauser A.; Hafeez, Fauzia Y.

    2015-01-01

    Pakistan is among top three chickpea producing countries but the crop is usually grown on marginal lands without irrigation and fertilizer application which significantly hampers its yield. Soil fertility and inoculation with beneficial rhizobacteria play a key role in nodulation and yield of legumes. Four kabuli and six desi chickpea genotypes were, therefore, evaluated for inoculation response with IAA-producing Ochrobactrum ciceri Ca-34T and nitrogen fixing Mesorhizobium ciceri TAL-1148 in single and co-inoculation in two soils. The soil type 1 was previously unplanted marginal soil having low organic matter, P and N contents compared to soil type 2 which was a fertile routinely legume-cultivated soil. The effect of soil fertility status was pronounced and fertile soil on average, produced 31% more nodules, 62% more biomass and 111% grain yield than marginal soil. Inoculation either with O. ciceri alone or its co-inoculation with M. ciceri produced on average higher nodules (42%), biomass (31%), grains yield (64%) and harvest index (72%) in both chickpea genotypes over non-inoculated controls in both soils. Soil 1 showed maximum relative effectiveness of Ca-34T inoculation for kabuli genotypes while soil 2 showed for desi genotypes except B8/02. Desi genotype B8/02 in soil type 1 and Pb-2008 in soil type 2 showed significant yield increase as compared to respective un-inoculated controls. Across bacterial inoculation treatments, grain yield was positively correlated to growth and yield contributing parameters (r = 0.294* to 0.838*** for desi and r = 0.388* to 0.857** for kabuli). PCA and CAT-PCA analyses clearly showed a site-specific response of genotype x bacterial inoculation. Furthermore, the inoculated bacterial strains were able to persist in the rhizosphere showing colonization on root and within nodules. Present study shows that plant growth promoting rhizobacteria (PGPR) inoculation should be integrated with national chickpea breading program in

  2. Detection of saccharides by reactive desorption electrospray ionization (DESI) using modified phenylboronic acids

    NASA Astrophysics Data System (ADS)

    Zhang, Yun; Chen, Hao

    2010-01-01

    We have reported previously a method for the detection of sugars via in-situ derivatization with phenylboronic acid PhB(OH)2 using reactive desorption electrospray ionization (DESI, Chen et al., Chem. Commun. (2006) 597-599). The present study describes an improved method that employs modified phenylboronic acids including 3-nitrophenylboronic acid and N-methyl-4-pyridineboronic acid iodide. In contrast to using PhB(OH)2, enhanced sensitivity of using 3-nitrophenylboronic acid was observed due to the stabilization of the resulting boronate ester anion by the electron-withdrawing nitro group and the limit of detections (LODs) for glucose in water using 3-nitrophenylbornic acid and phenylboronic acid were determined to be 0.11 mM and 0.40 mM, respectively. In the case of N-methyl-4-pyridineboronic acid iodide, the corresponding LOD is 6.9 [mu]M and the higher sensitivity obtained is attributed to the efficient ionization of both the reactive DESI reagent and reaction product since the precursor acid with a quaternary ammonium group is pre-charged. In this case, additional important features are found: (i) unlike using phenylboronic acid or 3-nitrophenylbornic acid, the experiment, performed in the positive ion mode, is applicable to neutral and acidic saccharide solutions, facilitating the analysis of biological fluids without the need to adjust pH; (ii) simply by changing the spray solvent from water to acetonitrile, the method can be used for direct glucose analyses of both urine and serum samples via online desalting, due to the low solubility of salts of these biofluids in the sprayed organic solvent; (iii) in comparison with other sugar derivatizing reagents such as the Girard's reagent T, the N-methyl-4-pyridineboronic acid iodide shows higher reactivity in the reactive DESI; and (iv) the ions of saccharide DESI reaction products undergo extensive ring or glycosidic bond cleavage upon CID, a feature that might be useful in the structure elucidation of

  3. Blotting Assisted by Heating and Solvent Extraction for DESI-MS Imaging

    NASA Astrophysics Data System (ADS)

    Cabral, Elaine C.; Mirabelli, Mario F.; Perez, Consuelo J.; Ifa, Demian R.

    2013-06-01

    Imprints of potato sprout ( Solanum tuberosum L.), gingko leaves (Gingko biloba L. ) and strawberries (Fragaria x ananassa Duch. ) were successfully imaged by desorption electrospray ionization mass spectrometry (DESI-MS) on TLC plates through blotting assisted by heating and/or solvent extraction. Ion images showing the distribution of significant compounds such as glycoalkaloid toxins in potato sprout, ginkgolic acids and flavonoids in ginkgo leaves, and sugars and anthocyanidin in strawberry were obtained. Practical implications of this work include analysis of a wide range of irregular or soft materials by different imprinting conditions without requiring the addition of matrices or use of specific kinds of surfaces.

  4. Analysis of DESY-Flash LLRF Measurements for the ILC Heavy Beam Loading Test

    SciTech Connect

    Cancelo, Gustavo; Chase, Brian; Davidsaver, Michael; Carwardine, J.; Simrock, Stefan; Ayvazyan, Valeri; Grecki, Mariusz; Matsumoto, Toshihiro; Michizono, Shinichiro; /KEK, Tsukuba

    2009-06-01

    In September 2008 the DESY-FLASH accelerator was run with up to 550, 3 nano-coulomb bunches at 5 Hz repetition rate. This test is part of a longer-term study aimed at validating ILC parameters by operation as close as possible to ILC beam currents and RF gradients. The present paper reports on the analysis that has been done in order to understand the RF control system performance during this test. Actual klystron power requirements and beam stability are evaluated with heavy beam loading conditions. Results include suggested improvements for upcoming tests in 2009.

  5. Optical fiber termination method for the Dark Energy Spectroscopic Instrument (DESI)

    NASA Astrophysics Data System (ADS)

    Poppett, Claire; Edelstein, Jerry; Ishikawa, Yuzo; Meghrouni-Brown, Zakios; Fagrelius, Parker

    2016-08-01

    The Dark Energy Spectroscopic Instrument (DESI) is under construction to measure the expansion history of the Universe using the Baryon Acoustic Oscillation technique. The spectra of 40 million galaxies over 14000 sq deg will be measured during the life of the experiment. A new prime focus corrector for the KPNO Mayall telescope will deliver light to 5000 fiber optic positioners. The fibers in turn feed ten broad-band spectrographs. We will describe the method we use to optically terminate the fibers which offers many advantages over methods that have been used in the past.

  6. Advances in Large Grain/Single Crystal SC Resonators at DESY

    SciTech Connect

    W. Singer; A. Brinkmann; A. Ermakov; J. Iversen; G. Kreps; A. Matheisen; D. Proch; D. Reschke; X. Singer; M. Spiwek; H. We; P. Kneisel; M. Pekeler

    2007-08-01

    The main aim of the DESY large grain R&D program is to check whether this option is reasonable to apply for fabrication of ca. 1'000 XFEL cavities. Two aspects are being pursued. On one hand the basic material investigation, on the other hand the material availability, fabrication and preparation procedure. Several single cell large grain cavities of TESLA shape have been fabricated and tested. The best accelerating gradients of 41 MV/m was measured on electropolished cavity. First large grain nine-cell cavities worldwide have been produced under contract of DESY with ACCEL Instruments Co. All three cavities fulfil the XFEL specification already in first RF test after only BCP (Buffered Chemical Polishing) treatment and 800 degrees C annealing. Accelerating gradient of 27 - 29 MV/m was reached. A fabrication method of single crystal cavity of ILC like shape was proposed. A single cell single crystal cavity was build at the company ACCEL. Accelerating gradient of 37.5 MV/m reached after only 112 microns BCP and in situ baking 120 degrees C for 6 hrs with the quality factor higher as 2x1010. The developed method can be extended on fabrication of multi cell single crystal cavities.

  7. DESI and other Dark Energy experiments in the era of neutrino mass measurements

    DOE PAGES

    Font-Ribera, Andreu; McDonald, Patrick; Mostek, Nick; ...

    2014-05-19

    Here we present Fisher matrix projections for future cosmological parameter measurements, including neutrino masses, Dark Energy, curvature, modified gravity, the inflationary perturbation spectrum, non-Gaussianity, and dark radiation. We focus on DESI and generally redshift surveys (BOSS, HETDEX, eBOSS, Euclid, and WFIRST), but also include CMB (Planck) and weak gravitational lensing (DES and LSST) constraints. The goal is to present a consistent set of projections, for concrete experiments, which are otherwise scattered throughout many papers and proposals. We include neutrino mass as a free parameter in most projections, as it will inevitably be relevant $-$ DESI and other experiments can measuremore » the sum of neutrino masses to ~ 0.02 eV or better, while the minimum possible sum is 0.06 eV. We note that constraints on Dark Energy are significantly degraded by the presence of neutrino mass uncertainty, especially when using galaxy clustering only as a probe of the BAO distance scale (because this introduces additional uncertainty in the background evolution after the CMB epoch). Using broadband galaxy power becomes relatively more powerful, and bigger gains are achieved by combining lensing survey constraints with redshift survey constraints. Finally, we do not try to be especially innovative, e.g., with complex treatments of potential systematic errors $-$ these projections are intended as a straightforward baseline for comparison to more detailed analyses.« less

  8. The National Analysis Facility at DESY - status and use cases by the participating experiments

    NASA Astrophysics Data System (ADS)

    Aplin, S.; Ehrenfeld, W.; Haupt, A.; Kemp, Y.; Langenbruch, C.; Leffhalm, K.; Lucaci-Timoce, A.; Stadie, H.

    2011-12-01

    The German National Analysis Facility (NAF) was set up at DESY, starting end of 2007 in the context of the Helmholtz Alliance "Physics at the Terascale". The NAF complements the DESY and the German Grid resources, and hence offers users from the German HEP institutes the best possible environment for data analysis. In the first part, the key aspects and components of the NAF are briefly presented with an emphasis on recent improvements. In the second part, the use cases of the three participating LHC experiments, ATLAS, CMS and LHCb, will be presented. Differences and commonalities in the usage of the NAF will be shown. Special emphasis will be placed on the usage of PROOF, whose usage on the NAF has been pioneered by CMS. It is now adapted by ATLAS. The third part will concentrate on how the NAF was used for detector optimisation studies in the preparation of one of the ILC Lol's (ILD 2009), as well as how CALICE uses the NAF for the analysis of their data taken in several test beam experiments performed for detector R & D. Finally, future developments of the NAF are presented.

  9. HPTLC/DESI-MS Imaging of Tryptic Protein Digests Separated in Two Dimensions

    SciTech Connect

    Pasilis, Sofie P; Kertesz, Vilmos; Van Berkel, Gary J; Schulz, Michael; Schorcht, Susanne

    2008-01-01

    Desorption electrospray ionization mass spectrometry (DESI-MS) was demonstrated as a method to detect and identify peptides from two-dimensional separations of cytochrome c and myoglobin tryptic digests on ProteoChrom HPTLC Cellulose sheets. Data-dependent tandem mass spectra were acquired during lane scans across the TLC plates. Peptides and the corresponding proteins were identified using a protein database search software. Two-dimensional distributions of identified peptides were mapped for each separated protein digest. Sequence coverages for cytochrome c and myoglobin were 81% and 74%, respectively. These compared well to those determined using the more standard HPLC/ESI-MS/MS approach (89% and 84%, respectively). Preliminary results show that use of more sensitive instrumentation has the potential for improved detection of peptides with low Rf values and improvement in sequence coverage. However, less multiple charging and more sodiation were seen in HPTLC/DESI-MS spectra relative to HPLC/ESI-MS spectra, which can affect peptide identification by MS/MS. Methods to increase multiple charging and reduce the extent of sodiation are currently under investigation.

  10. Analysis of metabolic changes in plant pathosystems by imprint imaging DESI-MS.

    PubMed

    Tata, Alessandra; Perez, Consuelo J; Hamid, Tanam S; Bayfield, Mark A; Ifa, Demian R

    2015-04-01

    The response of plants to microbial pathogens is based on the production of secondary metabolites. The complexity of plant-pathogen interactions makes their understanding a challenging task for metabolomic studies requiring powerful analytical approaches. In this paper, the ability of ambient mass spectrometry to provide a snapshot of plant metabolic response to pathogen invasion was tested. The fluctuations of glycoalkaloids present in sprouted potatoes infected by the phytopathogen Pythium ultimum were monitored by imprint imaging desorption electrospray ionization mass spectrometry (DESI-MS). After 8 d from the inoculation, a decrease of the relative abundance of potato glycoalkaloids α-solanine (m/z 706) and α-chaconine (m/z 722) was observed, whereas the relative intensity of solanidine (m/z 398), solasodenone (m/z 412), solanaviol (m/z 430), solasodiene (m/z 396), solaspiralidine (m/z 428), γ-solanine/γ-chaconine (m/z 560) , β-solanine (m/z 706), and β-chaconine (m/z 722) increased. The progression of the disease, expressed by the development of brown necrotic lesions on the potato, led to the further decrease of all the glycoalkaloid metabolites. Therefore, the applicability of imprint imaging DESI-MS in studying the plant metabolic changes in a simple pathosystem was demonstrated with minimal sample preparation.

  11. Analysis of Metabolic Changes in Plant Pathosystems by Imprint Imaging DESI-MS

    NASA Astrophysics Data System (ADS)

    Tata, Alessandra; Perez, Consuelo J.; Hamid, Tanam S.; Bayfield, Mark A.; Ifa, Demian R.

    2015-04-01

    The response of plants to microbial pathogens is based on the production of secondary metabolites. The complexity of plant-pathogen interactions makes their understanding a challenging task for metabolomic studies requiring powerful analytical approaches. In this paper, the ability of ambient mass spectrometry to provide a snapshot of plant metabolic response to pathogen invasion was tested. The fluctuations of glycoalkaloids present in sprouted potatoes infected by the phytopathogen Pythium ultimum were monitored by imprint imaging desorption electrospray ionization mass spectrometry (DESI-MS). After 8 d from the inoculation, a decrease of the relative abundance of potato glycoalkaloids α-solanine ( m/z 706) and α-chaconine ( m/z 722) was observed, whereas the relative intensity of solanidine ( m/z 398), solasodenone ( m/z 412), solanaviol ( m/z 430), solasodiene ( m/z 396), solaspiralidine ( m/z 428), γ-solanine/γ-chaconine ( m/z 560) , β-solanine ( m/z 706), and β-chaconine ( m/z 722) increased. The progression of the disease, expressed by the development of brown necrotic lesions on the potato, led to the further decrease of all the glycoalkaloid metabolites. Therefore, the applicability of imprint imaging DESI-MS in studying the plant metabolic changes in a simple pathosystem was demonstrated with minimal sample preparation.

  12. DESI and other Dark Energy experiments in the era of neutrino mass measurements

    SciTech Connect

    Font-Ribera, Andreu; McDonald, Patrick; Mostek, Nick; Reid, Beth A.; Seo, Hee-Jong; Slosar, Anže E-mail: PVMcDonald@lbl.gov E-mail: BAReid@lbl.gov E-mail: anze@bnl.gov

    2014-05-01

    We present Fisher matrix projections for future cosmological parameter measurements, including neutrino masses, Dark Energy, curvature, modified gravity, the inflationary perturbation spectrum, non-Gaussianity, and dark radiation. We focus on DESI and generally redshift surveys (BOSS, HETDEX, eBOSS, Euclid, and WFIRST), but also include CMB (Planck) and weak gravitational lensing (DES and LSST) constraints. The goal is to present a consistent set of projections, for concrete experiments, which are otherwise scattered throughout many papers and proposals. We include neutrino mass as a free parameter in most projections, as it will inevitably be relevant — DESI and other experiments can measure the sum of neutrino masses to ∼ 0.02 eV or better, while the minimum possible sum is ∼ 0.06 eV. We note that constraints on Dark Energy are significantly degraded by the presence of neutrino mass uncertainty, especially when using galaxy clustering only as a probe of the BAO distance scale (because this introduces additional uncertainty in the background evolution after the CMB epoch). Using broadband galaxy power becomes relatively more powerful, and bigger gains are achieved by combining lensing survey constraints with redshift survey constraints. We do not try to be especially innovative, e.g., with complex treatments of potential systematic errors — these projections are intended as a straightforward baseline for comparison to more detailed analyses.

  13. DESI and other Dark Energy experiments in the era of neutrino mass measurements

    SciTech Connect

    Font-Ribera, Andreu; McDonald, Patrick; Mostek, Nick; Reid, Beth A.; Seo, Hee-Jong; Slosar, Anže

    2014-05-19

    Here we present Fisher matrix projections for future cosmological parameter measurements, including neutrino masses, Dark Energy, curvature, modified gravity, the inflationary perturbation spectrum, non-Gaussianity, and dark radiation. We focus on DESI and generally redshift surveys (BOSS, HETDEX, eBOSS, Euclid, and WFIRST), but also include CMB (Planck) and weak gravitational lensing (DES and LSST) constraints. The goal is to present a consistent set of projections, for concrete experiments, which are otherwise scattered throughout many papers and proposals. We include neutrino mass as a free parameter in most projections, as it will inevitably be relevant $-$ DESI and other experiments can measure the sum of neutrino masses to ~ 0.02 eV or better, while the minimum possible sum is 0.06 eV. We note that constraints on Dark Energy are significantly degraded by the presence of neutrino mass uncertainty, especially when using galaxy clustering only as a probe of the BAO distance scale (because this introduces additional uncertainty in the background evolution after the CMB epoch). Using broadband galaxy power becomes relatively more powerful, and bigger gains are achieved by combining lensing survey constraints with redshift survey constraints. Finally, we do not try to be especially innovative, e.g., with complex treatments of potential systematic errors $-$ these projections are intended as a straightforward baseline for comparison to more detailed analyses.

  14. SINBAD-The accelerator R&D facility under construction at DESY

    NASA Astrophysics Data System (ADS)

    Dorda, U.; Assmann, R.; Brinkmann, R.; Flöttmann, K.; Hartl, I.; Hüning, M.; Kärtner, F.; Fallahi, A.; Marchetti, B.; Nie, Y.; Osterhoff, J.; Schlarb, H.; Zhu, J.; Maier, A. R.

    2016-09-01

    The SINBAD facility (Short INnovative Bunches and Accelerators at DESY) is a long-term dedicated accelerator research and development facility currently under construction at DESY. It will be located in the premises of the old DORIS accelerator complex and host multiple independent experiments cost-effectively accessing the same central infrastructure like a central high power laser. With the removal of the old DORIS accelerator being completed, the refurbishment of the technical infrastructure is currently starting up. The presently ongoing conversion of the area into the SINBAD facility and the currently foreseen layout is described. The first experiment will use a compact S-band linac for the production of ultra-short bunches at hundred MeV. Once established, one of the main usages will be to externally inject electrons into a laser-driven plasma wakefield accelerator to boost the energy to GeV-level while maintaining a usable beam quality, ultimately aiming to drive an FEL. The second experiment already under planning is the setup of an attosecond radiation source with advanced technology. Further usage of the available space and infrastructure is revised and national and international collaborations are being established.

  15. Effect of salinity on growth and yield of Desi and Kabuli chickpea cultivars.

    PubMed

    Sohrabi, Yousef; Heidari, Gholamreza; Esmailpoor, Behrooz

    2008-02-15

    To evaluate the effects of different level of Na salinity (0, 3, 6 and 9 dS m(-1)) on growth, yield and yield component of Kabuli (Hashem and Jam) and Desi (Kaka and Pirooz) chickpea cultivars a factorial experiment based on randomized complete block design with four replications was carried out in Research Greenhouse of Mokrian Agricultural Extension Center near Mahabad, Iran at 2006. Seeds of four chickpea cultivars were grown under 0, 3, 6 and 9 dS m(-1) levels of salinity until maturity. Salinity reduced the plant growth, flower, pod and seed number and seed weight. As increase in salinity, the undesirable effect of Na+ was more pronounced and reached the highest value at 9 dS m(-1) in all cultivars. Four chickpea cultivar have different responses to salinity and the Kabuli cultivars seemed to have a greater capacity for salt tolerance compared to Desi cultivars. Hahshem cultivar has the highest salinity tolerance among all cultivars.

  16. Desorption electrospray ionization mass spectrometry (DESI-MS) applied to the speciation of arsenic compounds from fern leaves.

    PubMed

    de Abreu, Lívia Botelho; Augusti, Rodinei; Schmidt, Lucas; Dressler, Valderi Luiz; Flores, Erico Marlon de Moraes; Nascentes, Clésia Cristina

    2013-09-01

    The different chemical forms of arsenic compounds, including inorganic and organic species, present distinct environmental impacts and toxicities. Desorption electrospray ionization mass spectrometry (DESI-MS) is an excellent technique for in situ analysis, as it operates under atmospheric pressure and room temperature and is conducted with no/minimal sample pretreatment. Aimed at expanding its scope, DESI-MS is applied herein for the quick and reliable detection of inorganic (arsenate--As(V): AsO4(3-) and arsenite--As(III): AsO2(-)) and organic (dimethylarsinic acid--DMA: (CH3)2AsO(OH) and disodium methyl arsonate hexahydrate: CH3AsO3·2Na·6H2O) arsenic compounds in fern leaves. Operational conditions of DESI-MS were optimized with DMA standard deposited on paper surfaces to improve ionization efficiency and detection limits. Mass spectra data for all arsenic species were acquired in both the positive and negative ion modes. The positive ion mode was shown to be useful in detecting both the organic and inorganic arsenic compounds. The negative ion mode was shown only to be useful in detecting As(V) species. Moreover, MS/MS spectra were recorded to confirm the identity of each arsenic compound by the characteristic fragmentation profiles. Optimized conditions of DESI-MS were applied to the analysis of fern leaves. LC-ICP-MS was employed to confirm the results obtained by DESI-MS and to quantify the arsenic species in fern leaves. The results confirmed the applicability of DESI-MS in detecting arsenic compounds in complex matrices.

  17. Das wissenschaftliche Handbuch

    NASA Astrophysics Data System (ADS)

    Luckenbach, Reiner; Sunkel, Josef

    1981-02-01

    The 100th anniversary of Beilstein's Handbook of Organic Chemistry, founded in 1881, merits a brief description of the principal concepts and goals of the literary genre “scientific handbook” in general. Systematic arrangement, critical data and fact evaluation, thoroughness and reliability are among these goals, thus providing the handbook user with a concise compilation of carefully checked and cross-referenced information in his particular field of interest.

  18. Confirmation and 3D profiling of anabolic steroid esters in injection sites using imaging desorption electrospray ionisation (DESI) mass spectrometry.

    PubMed

    de Rijke, Eva; Hooijerink, Dick; Sterk, Saskia S; Nielen, Michel W F

    2013-01-01

    In this study, desorption electrospray ionisation (DESI) linear ion trap tandem mass spectrometry (MS(n)) was applied for the confirmation and three-dimensional profiling of anabolic steroid esters in an injection site of bovine muscle. The spatial resolution of the DESI-MS(n) was demonstrated by scanning hormone esters and marker ink lines drawn at various distances on a microscopic slide at set distances, using an x-scanner with manual y and z adjustment. Tissue slices of bovine muscle injected with a hormone cocktail were analysed. All anabolic steroid esters could be directly detected in the sample and confirmed on the basis of identification points awarded for selected MS/MS transitions according to the performance criteria given in Commission Decision 2002/657/EC. Moreover, the injection site could be mapped by two-dimensional and three-dimensional imaging MS, showing a horizontal and vertical distribution through the muscle tissue. This DESI approach offers potential for analysis of injection sites of steroid esters from illegally treated animals; moreover, direct analysis by ambient imaging DESI-MS still allows conventional extraction and analysis of the whole tissue for further confirmatory or contra-analysis afterwards.

  19. Resolution Studies at Beam Position Monitors at the FLASH Facility at DESY

    SciTech Connect

    Baboi, N.; Lund-Nielsen, J.; Noelle, D.; Traber, T.; Kruse, J.; Riesch, W.; Wendt, M.

    2006-11-20

    More than 60 beam position monitors (BPM) are installed along about 350m of beamline of the Free Electron LASer in Hamburg (FLASH) at DESY. The room-temperature part of the accelerator is equipped mainly with stripline position monitors. In the accelerating cryo-modules there are cavity and re-entrant cavity BPMs, which will not be discussed here. In the undulator part of the machine button BPMs are used. This area requires a single bunch resolution of 10{mu}m. The electronics is based on the AM/PM normalization principle and is externally triggered. Single-bunch position is measured. This paper presents the methods used to determine the resolution of the BPMs. The results based on correlations between different BPMs along the machine are compared to noise measurements in the RF lab. The performance and difficulties with the BPM design and the current electronics as well as its development are discussed.

  20. Review of R&D at DESY on ingot niobium for accelerators

    SciTech Connect

    Navitski, Aliaksandr Sekutowicz, Jacek Singer, Waldemar Singer, Xenia

    2015-12-04

    An R&D program at DESY exploring the potential of the production of 1.3 GHz TESLA shape cavities from large grain or ingot niobium material has been carried out as a feasibility study for using ingot niobium material for the European X-ray Free-Electron Laser project. The most important issues like feasibility of the fabrication of niobium discs from ingots, material properties, cavity fabrication, treatment, and finally the cryogenic radiofrequency (RF) performance of the cavity in the accelerator modules are presented and discussed. At least 25% higher intrinsic quality factor comparing to conventional fine-grain niobium and high accelerating gradient of up to 45 MV/m have been demonstrated during the cryogenic RF tests both in the vertical cryostats and in a completely assembled accelerating cryo-module.

  1. Mitigating the impact of the DESI fiber assignment on galaxy clustering

    NASA Astrophysics Data System (ADS)

    Burden, Angela; Padmanabhan, Nikhil; Cahn, Robert N.; White, Martin J.; Samushia, Lado

    2017-03-01

    We present a simple strategy to mitigate the impact of an incomplete spectroscopic redshift galaxy sample as a result of fiber assignment and survey tiling. The method has been designed for the Dark Energy Spectroscopic Instrument (DESI) galaxy survey but may have applications beyond this. We propose a modification to the usual correlation function that nulls the almost purely angular modes affected by survey incompleteness due to fiber assignment. Predictions of this modified statistic can be calculated given a model of the two point correlation function. The new statistic can be computed with a slight modification to the data catalogues input to the standard correlation function code and does not incur any additional computational time. Finally we show that the spherically averaged baryon acoustic oscillation signal is not biased by the new statistic.

  2. Development of capabilities for imaging mass spectrometry under ambient conditions with desorption electrospray ionization (DESI)

    NASA Astrophysics Data System (ADS)

    Ifa, Demian R.; Wiseman, Justin M.; Song, Qingyu; Cooks, R. Graham

    2007-01-01

    Aspects of the development of mass spectrometry over the past three decades are briefly reviewed and growth points in the subject are identified. Molecular imaging by mass spectrometry is one such growth area. The development of a capability for 2D chemical imaging of surfaces is described, based on the combination of a desorption electrospray ionization (DESI) ion source with an automated surface stage capable of x, y translational motion. The lateral resolution of this new system is found to be less than 200 microns, using a test ink pattern. Chemical imaging of surfaces is demonstrated using model examples of organic and biological systems: (i) imaging of a 2D pattern written in different colored inks on photographic paper and (ii) imaging of thin coronal sections of rat brain tissue fixed onto a glass microscope slide. In both cases, full mass spectra are recorded as a function of x,y-position on the surface. In the chemical imaging example, the distributions of the two different inks on the paper surface were mapped by tracking the abundance of the intact organic cation which characterizes each particular ink dye. In the tissue imaging example, distributions of specific lipids in coronal sections of rat brain tissue were followed from the abundance distributions in 2D space of the deprotonated lipid molecules recorded in the negative ion mass spectra. These latter distributions reveal distinct anatomical features of the rat brain. The results of these studies demonstrate the feasibility of performing surface imaging studies using DESI and show that at this stage of its development it has a lateral spatial resolution of a few hundred microns.

  3. Monitoring Toxic Ionic Liquids in Zebrafish (Danio rerio) with Desorption Electrospray Ionization Mass Spectrometry Imaging (DESI-MSI)

    NASA Astrophysics Data System (ADS)

    Perez, Consuelo J.; Tata, Alessandra; de Campos, Michel L.; Peng, Chun; Ifa, Demian R.

    2016-10-01

    Ambient mass spectrometry imaging has become an increasingly powerful technique for the direct analysis of biological tissues in the open environment with minimal sample preparation and fast analysis times. In this study, we introduce desorption electrospray ionization mass spectrometry imaging (DESI-MSI) as a novel, rapid, and sensitive approach to localize the accumulation of a mildly toxic ionic liquid (IL), AMMOENG 130 in zebrafish (Danio rerio). The work demonstrates that DESI-MSI has the potential to rapidly monitor the accumulation of IL pollutants in aquatic organisms. AMMOENG 130 is a quaternary ammonium-based IL reported to be broadly used as a surfactant in commercialized detergents. It is known to exhibit acute toxicity to zebrafish causing extensive damage to gill secondary lamellae and increasing membrane permeability. Zebrafish were exposed to the IL in a static 96-h exposure study in concentrations near the LC50 of 1.25, 2.5, and 5.0 mg/L. DESI-MS analysis of zebrafish gills demonstrated the appearance of a dealkylated AMMOENG 130 metabolite in the lowest concentration of exposure identified by a high resolution hybrid LTQ-Orbitrap mass spectrometer as the trimethylstearylammonium ion, [C21H46N]+. With DESI-MSI, the accumulation of AMMOENG 130 and its dealkylated metabolite in zebrafish tissue was found in the nervous and respiratory systems. AMMOENG 130 and the metabolite were capable of penetrating the blood brain barrier of the fish with significant accumulation in the brain. Hence, we report for the first time the simultaneous characterization, distribution, and metabolism of a toxic IL in whole body zebrafish analyzed by DESI-MSI. This ambient mass spectrometry imaging technique shows great promise for the direct analysis of biological tissues to qualitatively monitor foreign, toxic, and persistent compounds in aquatic organisms from the environment.

  4. Monitoring Toxic Ionic Liquids in Zebrafish (Danio rerio) with Desorption Electrospray Ionization Mass Spectrometry Imaging (DESI-MSI).

    PubMed

    Perez, Consuelo J; Tata, Alessandra; de Campos, Michel L; Peng, Chun; Ifa, Demian R

    2016-10-24

    Ambient mass spectrometry imaging has become an increasingly powerful technique for the direct analysis of biological tissues in the open environment with minimal sample preparation and fast analysis times. In this study, we introduce desorption electrospray ionization mass spectrometry imaging (DESI-MSI) as a novel, rapid, and sensitive approach to localize the accumulation of a mildly toxic ionic liquid (IL), AMMOENG 130 in zebrafish (Danio rerio). The work demonstrates that DESI-MSI has the potential to rapidly monitor the accumulation of IL pollutants in aquatic organisms. AMMOENG 130 is a quaternary ammonium-based IL reported to be broadly used as a surfactant in commercialized detergents. It is known to exhibit acute toxicity to zebrafish causing extensive damage to gill secondary lamellae and increasing membrane permeability. Zebrafish were exposed to the IL in a static 96-h exposure study in concentrations near the LC50 of 1.25, 2.5, and 5.0 mg/L. DESI-MS analysis of zebrafish gills demonstrated the appearance of a dealkylated AMMOENG 130 metabolite in the lowest concentration of exposure identified by a high resolution hybrid LTQ-Orbitrap mass spectrometer as the trimethylstearylammonium ion, [C21H46N](+). With DESI-MSI, the accumulation of AMMOENG 130 and its dealkylated metabolite in zebrafish tissue was found in the nervous and respiratory systems. AMMOENG 130 and the metabolite were capable of penetrating the blood brain barrier of the fish with significant accumulation in the brain. Hence, we report for the first time the simultaneous characterization, distribution, and metabolism of a toxic IL in whole body zebrafish analyzed by DESI-MSI. This ambient mass spectrometry imaging technique shows great promise for the direct analysis of biological tissues to qualitatively monitor foreign, toxic, and persistent compounds in aquatic organisms from the environment. Graphical Abstract ᅟ.

  5. Transatlantic transport of Fermilab 3.9 GHz cryomodule for TTF/FLASH to DESY

    SciTech Connect

    McGee, M.W.; Vocean, V.; Grimm, C.; Schappert, W.; /Fermilab

    2008-06-01

    In an exchange of technology agreement, Fermilab built and will deliver a 3.9 GHz (3rd harmonic) cryomodule to DESY to be installed in the TTF/FLASH beamline. This cryomodule delivery will involve a combination of flatbed air ride truck and commercial aircraft transport to Hamburg Germany. A description of the isolation and damping systems that maintain alignment during transport and protect fragile components is provided. Initially, transport and corresponding alignment stability studies were performed in order to assess the risk associated with transatlantic travel of a fully assembled cryomodule. Shock loads were applied to the cryomodule by using a coldmass mockup to prevent subjecting actual critical components (such as the cavities and input couplers) to excessive forces. Accumulative and peak shock loads were applied through over-the-road testing and using a pendulum hammer apparatus, respectively. Finite Element Analysis (FEA) studies were implemented to define location of instrumentation for transport studies and provide modal frequencies and shapes. Shock and vibration measurement results of transport studies and stabilization techniques are discussed.

  6. Studies on a VUV free electron laser at the TESLA Test Facility at DESY

    SciTech Connect

    Rossbach, J.

    1995-12-31

    The TESLA Test Facility (TTF) currently under construction at DESY is a test-bed for acceleration sections of a high-gradient, high efficiency superconducting linear collider. Due to ist unrivaled ability to sustain high beam quality during acceleration, a superconducting rf linac is considered the optimum choice to drive a Free Electron Laser (FEL). We aim at a photon wavelength of {lambda} = 6 manometer utilizing the TTF after is has been extended to 1 GeV beam energy. Due to lack of mirrors and seed-lasers in this wavelength regime, a single pass FEL and Self-Amplified-Spontaneous-Emission (SASE) is considered. A first test is foreseen at a larger photon wavelength. The overall design as well as both electron and photon beam properties will be discussed. To reach the desired photon wavelength, the main components that have to be added to the TTF are: (a) a low emittance rf gun including space charge compensation (b) a two stage bunch compressor increasing the peak bunch current from 100 A up to 2500 A (c) four more accelerating modules to achieve 1 GeV beam energy (d) a 25 m long undulator (period length 27 mm, peak field 0.5 T) The average brillance will be larger than 1-10{sup 22}photons/s/mm{sup 2}/mrad{sup 2}/0.1%. Each 800 {mu}s long pulse will contain up to 7200 equidistant bunches. The repetition frequency of the linac is 10 Hz.

  7. Imprint of DESI fiber assignment on anisotropic power spectrum of emission line galaxies

    NASA Astrophysics Data System (ADS)

    Cahn, Robert N.; Pinol, Lucas; Hand, Nicholas; McDonald, Patrick; Seljak, Uros

    2017-01-01

    The Dark Energy Spectroscopic Instrument (DESI), a multiplexed fiber-fed spectrograph, is a Stage-IV ground-based dark energy experiment aiming to measure redshifts for 29 million Emission-Line Galaxies (ELG), 4 million Luminous Red Galaxies (LRG), and 2 million Quasi-Stellar Objects (QSO). The survey design includes an observation strategy determined by a fiber assignment algorithm that optimizes the allocation of fibers to targets. We investigate the systematic effects of the fiber assignment coverage on the anisotropic galaxy clustering of ELGs and show that, in the absence of any corrections, it leads to discrepancies of order ten percent on large scales for the power spectrum multipoles. We introduce a method where objects in a random catalog are assigned a coverage, and the mean density is separately computed for each coverage factor, and show that this method reduces, but does not eliminate the effect. The angular dependence of the contaminating signal is mostly in purely transverse modes. We find that the effect can be mitigated by binning in angle and excluding contributions near the transverse direction. This material is based upon work supported in part by the U.S. Department of Energy, Office of Science, Office of High Energy Physics, under Contract No. DE-AC02-05CH11231.

  8. Direct Visualization of Neurotransmitters in Rat Brain Slices by Desorption Electrospray Ionization Mass Spectrometry Imaging (DESI - MS)

    NASA Astrophysics Data System (ADS)

    Fernandes, Anna Maria A. P.; Vendramini, Pedro H.; Galaverna, Renan; Schwab, Nicolas V.; Alberici, Luciane C.; Augusti, Rodinei; Castilho, Roger F.; Eberlin, Marcos N.

    2016-12-01

    Mass spectrometry imaging (MSI) of neurotransmitters has so far been mainly performed by matrix-assisted laser desorption/ionization (MALDI) where derivatization reagents, deuterated matrix and/or high resolution, or tandem MS have been applied to circumvent problems with interfering ion peaks from matrix and from isobaric species. We herein describe the application of desorption electrospray ionization mass spectrometry imaging (DESI)-MSI in rat brain coronal and sagittal slices for direct spatial monitoring of neurotransmitters and choline with no need of derivatization reagents and/or deuterated materials. The amino acids γ-aminobutyric (GABA), glutamate, aspartate, serine, as well as acetylcholine, dopamine, and choline were successfully imaged using a commercial DESI source coupled to a hybrid quadrupole-Orbitrap mass spectrometer. The spatial distribution of the analyzed compounds in different brain regions was determined. We conclude that the ambient matrix-free DESI-MSI is suitable for neurotransmitter imaging and could be applied in studies that involve evaluation of imbalances in neurotransmitters levels.

  9. The Coadministration of Unoxidized and Oxidized Desi Ghee Ameliorates the Toxic Effects of Thermally Oxidized Ghee in Rabbits

    PubMed Central

    Uddin, Islam

    2017-01-01

    Desi Ghee was thermally oxidized at 160°C for 9 h and characterized for peroxide value (PV), free fatty acid (FFA), thiobarbituric acid reactive substances (TBARS), radical scavenging activity (RSA), and fatty acid and cholesterol composition using GC-MS. Oxidized (OG) and normal ghee (NG) were fed to rabbits in different doses. Blood was collected for hematology and biochemical analyses after 7 and 14 days. The oxidation of desi ghee increased the PV, FFA, and TBARS values and showed a decline in the RSA values. GC-MS revealed that desi ghee was rich in saturated fatty acids (55.9 g/100 g) and significant amounts of oleic acid (26.2 g/100 g). The OG significantly decreased the body weight, which was normalized by the coadministration of NG. Serum lipid profile showed a dose dependent increase in total cholesterol, triglycerides, and low density lipoproteins (LDL) and decrease in RBCs count, hematocrit, glucose, and hemoglobin concentration with OG feeding. These parameters were normalized by coadministration of NG. Liver histopathology of OG fed groups showed bile duct dilation and necrotic changes, while normal architecture showed in NG groups, compared to control. These results indicate that NG has no significant effect on rabbits comparing with OG and that it was beneficial when coadministered with oxidized ghee. PMID:28299204

  10. Direct Visualization of Neurotransmitters in Rat Brain Slices by Desorption Electrospray Ionization Mass Spectrometry Imaging (DESI - MS).

    PubMed

    Fernandes, Anna Maria A P; Vendramini, Pedro H; Galaverna, Renan; Schwab, Nicolas V; Alberici, Luciane C; Augusti, Rodinei; Castilho, Roger F; Eberlin, Marcos N

    2016-12-01

    Mass spectrometry imaging (MSI) of neurotransmitters has so far been mainly performed by matrix-assisted laser desorption/ionization (MALDI) where derivatization reagents, deuterated matrix and/or high resolution, or tandem MS have been applied to circumvent problems with interfering ion peaks from matrix and from isobaric species. We herein describe the application of desorption electrospray ionization mass spectrometry imaging (DESI)-MSI in rat brain coronal and sagittal slices for direct spatial monitoring of neurotransmitters and choline with no need of derivatization reagents and/or deuterated materials. The amino acids γ-aminobutyric (GABA), glutamate, aspartate, serine, as well as acetylcholine, dopamine, and choline were successfully imaged using a commercial DESI source coupled to a hybrid quadrupole-Orbitrap mass spectrometer. The spatial distribution of the analyzed compounds in different brain regions was determined. We conclude that the ambient matrix-free DESI-MSI is suitable for neurotransmitter imaging and could be applied in studies that involve evaluation of imbalances in neurotransmitters levels. Graphical Abstract ᅟ.

  11. Imprint of DESI fiber assignment on the anisotropic power spectrum of emission line galaxies

    NASA Astrophysics Data System (ADS)

    Pinol, Lucas; Cahn, Robert N.; Hand, Nick; Seljak, Uroš; White, Martin

    2017-04-01

    The Dark Energy Spectroscopic Instrument (DESI), a multiplexed fiber-fed spectrograph, is a Stage-IV ground-based dark energy experiment aiming to measure redshifts for 29 million Emission-Line Galaxies (ELG), 4 million Luminous Red Galaxies (LRG), and 2 million Quasi-Stellar Objects (QSO). The survey design includes a pattern of tiling on the sky, the locations of the fiber positioners in the focal plane of the telescope, and an observation strategy determined by a fiber assignment algorithm that optimizes the allocation of fibers to targets. This strategy allows a given region to be covered on average five times for a five-year survey, with a typical variation of about 1.5 about the mean, which imprints a spatially-dependent pattern on the galaxy clustering. We investigate the systematic effects of the fiber assignment coverage on the anisotropic galaxy clustering of ELGs and show that, in the absence of any corrections, it leads to discrepancies of order ten percent on large scales for the power spectrum multipoles. We introduce a method where objects in a random catalog are assigned a coverage, and the mean density is separately computed for each coverage factor. We show that this method reduces, but does not eliminate the effect. We next investigate the angular dependence of the contaminated signal, arguing that it is mostly localized to purely transverse modes. We demonstrate that the cleanest way to remove the contaminating signal is to perform an analysis of the anisotropic power spectrum P(k,μ) and remove the lowest μ bin, leaving μ > 0 modes accurate at the few-percent level. Here, μ is the cosine of the angle between the line-of-sight and the direction of vec k. We also investigate two alternative definitions of the random catalog and show that they are comparable but less effective than the coverage randoms method.

  12. Studies on the effectiveness of oral pellet vaccine in improving egg production and egg quality in desi chicken

    PubMed Central

    Reetha, T. Lurthu; Rajeswar, J. Johnson; Harikrishnan, T. J.; Sukumar, K.; Srinivasan, P.; Kirubakaran, J. John

    2016-01-01

    Aim: To study the effect of Newcastle disease (ND) oral pellet vaccine in egg production and egg quality in desi chicken. Materials and Methods: The study was conducted at Veterinary University Training and Research Centre, Tiruchirapalli, Tamil Nadu. A total of 48-day-old desi chicks obtained from a private hatchery in Namakkal, Tamil Nadu, were maintained under cage system of rearing up to 52 weeks of age as per standard management practices. All the 48 chicks were divided into six groups having eight chicks in each group were subjected to different treatment regimes. All the birds were challenged at 52 weeks of age with 0.5 ml dose of 104.0 egg infectious dose 50 virulent ND field virus. 10 eggs from each group were randomly collected during the last 3 days of 8 weeks interval period from 28 to 52 weeks of age and were used to measure the egg quality parameters. The production performance of each group was assessed at 4 weeks interval period from 25 to 52 weeks of age. Results: In all the six treatment groups with respect to egg production, no significant difference (p≥0.05) was noticed from 25 to 52 weeks of age. Similarly, in egg weight, egg shape index and specific gravity, no significant difference (p≥0.05) was noticed from 28 to 52 weeks of age. Conclusion: From this study, it is concluded that the administration of ND oral pellet vaccine to desi chicken does not affect the egg production performance, egg weight, egg shape index, and specific gravity of egg. PMID:27651681

  13. Ambient DESI and LESA-MS Analysis of Proteins Adsorbed to a Biomaterial Surface Using In-Situ Surface Tryptic Digestion

    NASA Astrophysics Data System (ADS)

    Rao, Wei; Celiz, Adam D.; Scurr, David J.; Alexander, Morgan R.; Barrett, David A.

    2013-12-01

    The detection and identification of proteins adsorbed onto biomaterial surfaces under ambient conditions has significant experimental advantages but has proven to be difficult to achieve with conventional measuring technologies. In this study, we present an adaptation of desorption electrospray ionization (DESI) and liquid extraction surface analysis (LESA) mass spectrometry (MS) coupled with in-situ surface tryptic digestion to identify protein species from a biomaterial surface. Cytochrome c, myoglobin, and BSA in a combination of single and mixture spots were printed in an array format onto Permanox slides, followed by in-situ surface digestion and detection via MS. Automated tandem MS performed on surface peptides was able to identify the proteins via MASCOT. Limits of detection were determined for DESI-MS and a comparison of DESI and LESA-MS peptide spectra characteristics and sensitivity was made. DESI-MS images of the arrays were produced and analyzed with imaging multivariate analysis to automatically separate peptide peaks for each of the proteins within a mixture into distinct components. This is the first time that DESI and LESA-MS have been used for the in-situ detection of surface digested proteins on biomaterial surfaces and presents a promising proof of concept for the use of ambient MS in the rapid and automated analysis of surface proteins.

  14. "Loops and Legs in Quantum Field Theory", 12th DESY Workshop on Elementary Particle Physics

    NASA Astrophysics Data System (ADS)

    excellent working conditions. We would like to thank Martina Mende for all her work in helping to organize this conference. Details of the conference can be found under: https://indico.desy.de/conferenceDisplay.py?confId=8107

  15. Near-isogenic lines of desi chickpea (Cicer arietinum L.) that differ in milling ease: differences in chemical composition.

    PubMed

    Wood, Jennifer A; Knights, Edmund J; Campbell, Grant M; Choct, Mingan

    2017-03-01

    Milling performance is an important attribute for desi chickpea and other pulses, as varieties that are more difficult-to-mill lead to processing yield loss and damage to the resulting split cotyledons (dhal) such as chipping and abrasion which are unattractive to the consumer. Poor milling performance leads to poor dhal quality and therefore lower prices and profitability along the pulse value chain. The Pulse Breeding Australia Chickpea Program identified near-isogenic desi lines that differed in seed shape and milling yields, however it was unknown whether this was due simply to a difference in physical forces on the seed during milling, mediated by seed shape, or whether there were underlying differences in chemical composition that could explain these differences. The two isolines differed in the composition of their seed coat, cotyledons and adjoining surfaces. Some of these differences were in agreement with previous research on composition of easy- and difficult-to-mill samples. These differences suggest that biochemical adhesive or cohesive mechanisms at the interface of seed tissues involve pectic polysaccharides and lignin-mediated binding.

  16. An Assessment of the Utility of Tissue Smears in Rapid Cancer Profiling with Desorption Electrospray Ionization Mass Spectrometry (DESI-MS)

    NASA Astrophysics Data System (ADS)

    Woolman, Michael; Tata, Alessandra; Bluemke, Emma; Dara, Delaram; Ginsberg, Howard J.; Zarrine-Afsar, Arash

    2017-01-01

    Mass spectrometry imaging with desorption electrospray ionization mass spectrometry (DESI-MS) is used to characterize cancer from ex vivo slices of tissues. The process is time-consuming. The use of tissue smears for DESI-MS analysis has been proposed as it eliminates the time required to snap-freeze and section the tissue. To assess the utility of tissue smears for rapid cancer characterization, principal component analysis (PCA) was performed to evaluate the concordance between DESI-MS profiles of breast cancer from tissue slices and smears prepared on various surfaces. PCA suggested no statistical discrimination between DESI-MS profiles of tissue sections and tissue smears prepared on glass, polytetrafluoroethylene (PTFE), and porous PTFE. However, the abundances of cancer biomarker ions varied between sections and smears, with DESI-MS analysis of tissue sections yielding higher ion abundances of cancer biomarkers compared with smears. Coefficient of variance (CV) analysis suggests DESI-MS profiles from tissue smears are as reproducible as the ones from tissue sections. The limit of detection with smear samples from single pixel analysis is comparable to tissue sections that average the signal from a tissue area of 0.01 mm2. The smears prepared on the PTFE surface possessed a higher degree of homogeneity compared with the smears prepared on the glass surface. This allowed single MS scans ( 1 s) from random positions across the surface of the smear to be used in rapid cancer typing with good reproducibility, providing pathologic information for cancer typing at speeds suitable for clinical utility.

  17. Monitoring the FLASH Cryomodule Transportation from DESY Hamburg to CEA Saclay: Coupler Contact, Vacuum, Acceleration and Vibration Analysis

    SciTech Connect

    Barbanotti, S.; Bosotti, A.; Fusetti, M.; Michelato, P.; Bertolini, A.; Berry, S.; Dorlot, M.; Madec, C.; Napoly, O.; Amirikas, R.; Boehnert, M.; /DESY /Fermilab

    2009-05-01

    With a view to the series production of one hundred, 12 m long XFEL 1.3 GHz cryomodules and their transportation from the assembly site at CEA Saclay (F) to the installation site at DESY Hamburg (D) a test transportation of a FLASH cryomodule has been performed, in the condition foreseen for the mass transportation. The present study examines the stresses induced on the module and verifies the damping capabilities of the transport frame in order to minimize risk of damage to the most critical components. During the transportation, acceleration and vibration have been monitored as well as coupler antenna contacts and vacuum performances. This paper describes the analysis performed and compares those results to the data of a similar transportation study at Fermilab for the CM1 cryomodule.

  18. Simulation of a He II Lyman-alpha soft x-ray laser pumped by DESY/XFEL radiation

    NASA Astrophysics Data System (ADS)

    Lan, Ke; Fill, Ernst E.; Meyer-ter-Vehn, Jurgen

    2003-12-01

    The high brilliance expected from the X-ray Free-Electron Lasers (XFEL"s) now under construction suggest re-investigating the feasibility of a photopumped soft X-ray laser. We present simulations of a Lyman-α X-ray laser in hydrogenic He (λ = 30.4 nm) pumped by XFEL radiation with parameters of the TESLA Test Facility, phase II, at DESY/Hamburg. The simulations show that high gain can be achieved at a pump intensity of 1015 W/cm2. The realization of such a laser could provide a better understanding of the physics of photopumped lasers and thus help to develop table-top X-ray lasers.

  19. Recent breeding programs enhanced genetic diversity in both desi and kabuli varieties of chickpea (Cicer arietinum L.).

    PubMed

    Thudi, Mahendar; Chitikineni, Annapurna; Liu, Xin; He, Weiming; Roorkiwal, Manish; Yang, Wei; Jian, Jianbo; Doddamani, Dadakhalandar; Gaur, Pooran M; Rathore, Abhishek; Samineni, Srinivasan; Saxena, Rachit K; Xu, Dawen; Singh, Narendra P; Chaturvedi, Sushil K; Zhang, Gengyun; Wang, Jun; Datta, Swapan K; Xu, Xun; Varshney, Rajeev K

    2016-12-16

    In order to understand the impact of breeding on genetic diversity and gain insights into temporal trends in diversity in chickpea, a set of 100 chickpea varieties released in 14 countries between 1948 and 2012 were re-sequenced. For analysis, the re-sequencing data for 29 varieties available from an earlier study was also included. Copy number variations and presence absence variations identified in the present study have potential to drive phenotypic variations for trait improvement. Re-sequencing of a large number of varieties has provided opportunities to inspect the genetic and genomic changes reflecting the history of breeding, which we consider as breeding signatures and the selected loci may provide targets for crop improvement. Our study also reports enhanced diversity in both desi and kabuli varieties as a result of recent chickpea breeding efforts. The current study will aid the explicit efforts to breed for local adaptation in the context of anticipated climate changes.

  20. Recent breeding programs enhanced genetic diversity in both desi and kabuli varieties of chickpea (Cicer arietinum L.)

    PubMed Central

    Thudi, Mahendar; Chitikineni, Annapurna; Liu, Xin; He, Weiming; Roorkiwal, Manish; Yang, Wei; Jian, Jianbo; Doddamani, Dadakhalandar; Gaur, Pooran M.; Rathore, Abhishek; Samineni, Srinivasan; Saxena, Rachit K.; Xu, Dawen; Singh, Narendra P.; Chaturvedi, Sushil K.; Zhang, Gengyun; Wang, Jun; Datta, Swapan K.; Xu, Xun; Varshney, Rajeev K.

    2016-01-01

    In order to understand the impact of breeding on genetic diversity and gain insights into temporal trends in diversity in chickpea, a set of 100 chickpea varieties released in 14 countries between 1948 and 2012 were re-sequenced. For analysis, the re-sequencing data for 29 varieties available from an earlier study was also included. Copy number variations and presence absence variations identified in the present study have potential to drive phenotypic variations for trait improvement. Re-sequencing of a large number of varieties has provided opportunities to inspect the genetic and genomic changes reflecting the history of breeding, which we consider as breeding signatures and the selected loci may provide targets for crop improvement. Our study also reports enhanced diversity in both desi and kabuli varieties as a result of recent chickpea breeding efforts. The current study will aid the explicit efforts to breed for local adaptation in the context of anticipated climate changes. PMID:27982107

  1. Acid-catalyzed Reactions in Model Secondary Organic Aerosol (SOA): Insights using Desorption-electrospray Ionization (DESI) Tandem Mass Spectrometry

    NASA Astrophysics Data System (ADS)

    Fiddler, M. N.; Cooks, R. G.; Shepson, P.

    2008-12-01

    Atmospheric aerosols are presently little understood in terms of their sources, formation, and effect on climate forcing, despite their significant impacts on climate change and respiratory health. Secondary organic aerosols (SOA), which were thought to arise entirely from simple gas-particle partitioning, have recently been found to contain oligomeric species which result from the condensed-phase reactions of volatile organic compounds (VOCs). The non-methane VOC with the greatest emission flux, isoprene, is known to produce aerosols through chemistry involving its oxidation products. We selected one of its major oxidation product, methacrolein, to assess its role in oligomeric SOA formation in response to the acidic conditions found in cloud water. Since it has been found that acidified aerosol produces oligomeric species with greater molecular weight and yield, acid-catalyzed oligomerization is likely a significant process in the formation of SOA. Aqueous solutions of methacrolein were acidified with sulfuric acid, and studied using linear ion trap mass spectrometry (LIT-MS) with a home-built desorption-electrospray ionization (DESI) source. An extremely heterogeneous mixture of products was produced in this system, resulting from hydrolysis, acid- catalyzed oxidation, reduction, and organosulfate formation. Evidence for disproportionation and heterocycle formation are proposed as reaction mechanisms hitherto unrecognized in the production of SOA. The proposed structure and formation mechanism for several species, based upon their MS/MS spectra, will also be presented.

  2. Use of intermediate focus for grazing incidence small and wide angle x-ray scattering experiments at the beamline P03 of PETRA III, DESY

    SciTech Connect

    Santoro, G.; Buffet, A.; Döhrmann, R.; Yu, S.; Roth, S. V.; Körstgens, V.; Müller-Buschbaum, P.; Gedde, U.; Hedenqvist, M.

    2014-04-15

    We describe the new experimental possibilities of the micro- and nanofocus X-ray scattering beamline P03 of the synchrotron source PETRA III at DESY, Hamburg (Germany), which arise from experiments with smaller beam sizes in the micrometer range. This beamline has been upgraded recently to perform new kinds of experiments. The use of an intermediate focus allows for reducing the beam size of microfocused hard X-rays while preserving a large working distance between the focusing elements and the focus position. For the first time, this well-known methodology has been employed to grazing incidence small- and wide-angle X-ray scattering (GISAXS/GIWAXS). As examples, we highlight the applications to in situ studies using microfluidic devices in GISAXS geometry as well as the investigation of the crystallinity of thin films in GIWAXS geometry.

  3. Spatially resolved investigation of systemic and contact pesticides in plant material by desorption electrospray ionization mass spectrometry imaging (DESI-MSI).

    PubMed

    Gerbig, Stefanie; Brunn, Hubertus E; Spengler, Bernhard; Schulz, Sabine

    2015-09-01

    Distribution of pesticides both on the surface of leaves and in cross sections of plant stem and leaves was investigated using desorption electrospray ionization mass spectrometry imaging (DESI-MSI) with a spatial resolution of 50-100 μm. Two commercially available insecticide sprays containing different contact pesticides were applied onto leaves of Cotoneaster horizontalis, and the distributions of all active ingredients were directly analyzed. The first spray contained pyrethrins and rapeseed oil, both known as natural insecticides. Each component showed an inhomogeneous spreading throughout the leaf, based on substance polarity and solubility. The second spray contained the synthetic insecticides imidacloprid and methiocarb. Imidacloprid accumulated on the border of the leaf, while methiocarb was distributed more homogenously. In order to investigate the incorporation of a systemically acting pesticide into Kalanchoe blossfeldiana, a commercially available insecticide tablet containing dimethoate was spiked to the soil of the plant. Cross sections of the stem and leaf were obtained 25 and 60 days after application. Dimethoate was mainly detected in the transport system of the plant after 25 days, while it was found to be homogenously distributed in a leaf section after 60 days.

  4. High throughput screening of high-affinity ligands for proteins with anion-binding sites using desorption electrospray ionization (DESI) mass spectrometry.

    PubMed

    Lu, Xin; Ning, Baoming; He, Dacheng; Huang, Lingyun; Yue, Xiangjun; Zhang, Qiming; Huang, Haiwei; Liu, Yang; He, Lan; Ouyang, Jin

    2014-03-01

    A high throughput screening system involving a linear ion trap (LTQ) analyzer, a house-made platform and a desorption electrospray ionization (DESI) source was established to screen ligands with a high affinity for proteins with anion-binding sites. The complexes were analyzed after incubation, ultrafiltration, washing, and displacement. A new anionic region inhibited dissociation (ARID) mechanism that was suitable for a protein with anion-binding site was proposed. We utilized the differences in detectable dissociation of protein-ligand complexes, combined with displacement experiments, to distinguish free ligands displaced from anion-binding sites from liberated ligands dissociated from nonspecific interactions. The method was validated by α1-acid glycoprotein (AGP) and (R), (S)-amlodipine. Site-specific enantioselectivity shown in our experiments was consistent with earlier studies. Obtaining all of the qualitative information of 15*3 samples in 2.3 min indicates that the analysis process is no longer the time-limiting step in the initial stage of drug discovery. Quantitative information verified that our method was at least a semiquantitative method.

  5. High Throughput Screening of High-Affinity Ligands for Proteins with Anion-Binding Sites using Desorption Electrospray Ionization (DESI) Mass Spectrometry

    NASA Astrophysics Data System (ADS)

    Lu, Xin; Ning, Baoming; He, Dacheng; Huang, Lingyun; Yue, Xiangjun; Zhang, Qiming; Huang, Haiwei; Liu, Yang; He, Lan; Ouyang, Jin

    2014-03-01

    A high throughput screening system involving a linear ion trap (LTQ) analyzer, a house-made platform and a desorption electrospray ionization (DESI) source was established to screen ligands with a high affinity for proteins with anion-binding sites. The complexes were analyzed after incubation, ultrafiltration, washing, and displacement. A new anionic region inhibited dissociation (ARID) mechanism that was suitable for a protein with anion-binding site was proposed. We utilized the differences in detectable dissociation of protein-ligand complexes, combined with displacement experiments, to distinguish free ligands displaced from anion-binding sites from liberated ligands dissociated from nonspecific interactions. The method was validated by α1-acid glycoprotein (AGP) and (R), (S)-amlodipine. Site-specific enantioselectivity shown in our experiments was consistent with earlier studies. Obtaining all of the qualitative information of 15*3 samples in 2.3 min indicates that the analysis process is no longer the time-limiting step in the initial stage of drug discovery. Quantitative information verified that our method was at least a semiquantitative method.

  6. Probing Molecular Associations of Field-Collected and Laboratory-Generated SOA with Nano-DESI High-Resolution Mass Spectrometry

    SciTech Connect

    O'Brien, Rachel E.; Nguyen, Tran B.; Laskin, Alexander; Laskin, Julia; Hayes, Patrick L.; Liu, Shang; Jimenez, Jose L.; Russell, Lynn M.; Nizkorodov, Sergey; Goldstein, Allen H.

    2013-01-30

    Aerosol samples from the 2010 CalNex field study in Bakersfield (BF) and Los Angeles (LA) were analyzed using positive mode nanospray-desorption electrospray ionization mass spectrometry (nano-DESI-MS). Secondary organic aerosol (SOA) produced in a photochemical chamber by photooxidation of diesel (DSL) fuel and isoprene (ISO) under humid, high-NOx conditions, was analyzed for comparison. Three groups of organic compounds with zero, one, or two nitrogen atoms in their molecular formulas (0N, 1N, 2N) were compared in detail. The composition of ambient SOA exhibited greater overlap with DSL than with ISO. The overlap of the chamber experiments with the BF data was relatively consistent throughout the day while the overlap with LA data increased significantly in the noon-6pm sample, consistent with the SOA plume arriving from downtown Los Angeles. BF samples were more oxidized, contained more organic nitrogen, and had more overlap with the chamber data compared to LA samples. The addition of gaseous ammonia (NH3) to the DSL experiment was necessary to generate many of the 2N compounds observed in BF. This analysis demonstrates that DSL and ISO were important sources but cannot account for all of the observed ambient compounds indicating that other sources of organics were also likely important.

  7. Versatile sample environments and automation for biological solution X-ray scattering experiments at the P12 beamline (PETRA III, DESY)

    PubMed Central

    Blanchet, Clement E.; Spilotros, Alessandro; Schwemmer, Frank; Graewert, Melissa A.; Kikhney, Alexey; Jeffries, Cy M.; Franke, Daniel; Mark, Daniel; Zengerle, Roland; Cipriani, Florent; Fiedler, Stefan; Roessle, Manfred; Svergun, Dmitri I.

    2015-01-01

    A high-brilliance synchrotron P12 beamline of the EMBL located at the PETRA III storage ring (DESY, Hamburg) is dedicated to biological small-angle X-ray scattering (SAXS) and has been designed and optimized for scattering experiments on macromolecular solutions. Scatterless slits reduce the parasitic scattering, a custom-designed miniature active beamstop ensures accurate data normalization and the photon-counting PILATUS 2M detector enables the background-free detection of weak scattering signals. The high flux and small beam size allow for rapid experiments with exposure time down to 30–50 ms covering the resolution range from about 300 to 0.5 nm. P12 possesses a versatile and flexible sample environment system that caters for the diverse experimental needs required to study macromolecular solutions. These include an in-vacuum capillary mode for standard batch sample analyses with robotic sample delivery and for continuous-flow in-line sample purification and characterization, as well as an in-air capillary time-resolved stopped-flow setup. A novel microfluidic centrifugal mixing device (SAXS disc) is developed for a high-throughput screening mode using sub-microlitre sample volumes. Automation is a key feature of P12; it is controlled by a beamline meta server, which coordinates and schedules experiments from either standard or nonstandard operational setups. The integrated SASFLOW pipeline automatically checks for consistency, and processes and analyses the data, providing near real-time assessments of overall parameters and the generation of low-resolution models within minutes of data collection. These advances, combined with a remote access option, allow for rapid high-throughput analysis, as well as time-resolved and screening experiments for novice and expert biological SAXS users. PMID:25844078

  8. Hostile Times: Desi College Students Cope with Hate

    ERIC Educational Resources Information Center

    Isler, Hilal Nakiboglu

    2006-01-01

    The attacks of terror carried out on September 11, 2001 gave rise to waves of hate-fueled violence across the country. It has been argued that the attacks and the subsequent, current context of war have resulted in a heightened sense of American intolerance. They have led to discernable shifts in how certain minorities are perceived and treated in…

  9. Long Term Stability of Coriolis Flow Meters: DESY experience

    NASA Astrophysics Data System (ADS)

    Boeckmann, T.; Bozhko, Y.; Escherich, K.; Petersen, B.; Putselyk, S.; Schnautz, T.; Sellmann, D.; Zhirnov, A.

    2017-02-01

    The measurement of coolant flow is important operational parameter for reliable operation of cryogenic system with superconducting magnets or cavities as well as for the system diagnostics in case of non-steady-state operation, e.g. during cool-down/warm-up or other transients. Proper flowmeter is chosen according to the different parameters, e.g. turn-down, operating temperature range, leak-tightness, pressure losses, long-term stability, etc. For helium cryogenics, the Venturi tube or Orifice, as well as Coriolis flow meters are often applied. For the present time, the orifices are usually used due to their simplicity and low costs, however, low turn-down range, large pressure drop, restriction of flow area, susceptibility to thermoacoustic oscillations limit their useful operation range. Operational characteristics of Venturi tubes is substantially improved in comparison to orifices, however, relative high costs and susceptibility to thermoacoustic oscillations still limit their application to special cases. The Coriolis flow meters do not have typical drawbacks of Venturi tube and orifices, however long-term stability over many years was not demonstrated yet. This paper describes the long-term behaviour of Coriolis flow meters after many years of operation at AMTF and XMTS facilities.

  10. APOLLON at DESY: Spin-dependent photoproduction of charm

    SciTech Connect

    Miller, C. A.

    1998-01-20

    APOLLON is a proposal to measure the polarization asymmetry of J/{psi} photoproduction in a fixed target experiment at HERA in an effort to provide information on the gluon spin distribution in the nucleon. Inelastic production will be identified via the {mu}{sup +}{mu}{sup -} decay channel, resulting in a statistical precision of {delta}A=0.05 in a 12 month run. In the LO CSM, the corresponding precision in {delta}G(x)/G(x) is 0.15 at x{approx}0.4.

  11. Lifelong Learning in the Information Age: Organizing Net-Based Learning and Teaching Systems. Wissenschaftliche Fachbibliothek.

    ERIC Educational Resources Information Center

    Finke, Wolfgang F.

    This book examines lifelong learning in the Information Age and the role of higher education (HE) in providing the educational services needed by lifelong learners. The following are among the topics discussed in the book's eight chapters: (1) changes in HE (repercussions of globalization in the educational sector; competition in higher learning;…

  12. Dynamic Electrical Source Imaging (DESI) of Seizures and Interictal Epileptic Discharges Without Ensemble Averaging

    PubMed Central

    Erem, Burak; Hyde, Damon E.; Peters, Jurriaan M.; Duffy, Frank H.; Warfield, Simon K.

    2016-01-01

    We propose an algorithm for electrical source imaging of epileptic discharges that takes a data-driven approach to regularizing the dynamics of solutions. The method is based on linear system identification on short time segments, combined with a classical inverse solution approach. Whereas ensemble averaging of segments or epochs discards inter-segment variations by averaging across them, our approach explicitly models them. Indeed, it may even be possible to avoid the need for the time-consuming process of marking epochs containing discharges altogether. We demonstrate that this approach can produce both stable and accurate inverse solutions in experiments using simulated data and real data from epilepsy patients. In an illustrative example, we show that we are able to image propagation using this approach. We show that when applied to imaging seizure data, our approach reproducibly localized frequent seizure activity to within the margins of surgeries that led to patients’ seizure freedom. The same approach could be used in the planning of epilepsy surgeries, as a way to localize potentially epileptogenic tissue that should be resected. PMID:27479957

  13. Monitoring System for the GRID Monte Carlo Mass Production in the H1 Experiment at DESY

    NASA Astrophysics Data System (ADS)

    Bystritskaya, Elena; Fomenko, Alexander; Gogitidze, Nelly; Lobodzinski, Bogdan

    2014-06-01

    The H1 Virtual Organization (VO), as one of the small VOs, employs most components of the EMI or gLite Middleware. In this framework, a monitoring system is designed for the H1 Experiment to identify and recognize within the GRID the best suitable resources for execution of CPU-time consuming Monte Carlo (MC) simulation tasks (jobs). Monitored resources are Computer Elements (CEs), Storage Elements (SEs), WMS-servers (WMSs), CernVM File System (CVMFS) available to the VO HONE and local GRID User Interfaces (UIs). The general principle of monitoring GRID elements is based on the execution of short test jobs on different CE queues using submission through various WMSs and directly to the CREAM-CEs as well. Real H1 MC Production jobs with a small number of events are used to perform the tests. Test jobs are periodically submitted into GRID queues, the status of these jobs is checked, output files of completed jobs are retrieved, the result of each job is analyzed and the waiting time and run time are derived. Using this information, the status of the GRID elements is estimated and the most suitable ones are included in the automatically generated configuration files for use in the H1 MC production. The monitoring system allows for identification of problems in the GRID sites and promptly reacts on it (for example by sending GGUS (Global Grid User Support) trouble tickets). The system can easily be adapted to identify the optimal resources for tasks other than MC production, simply by changing to the relevant test jobs. The monitoring system is written mostly in Python and Perl with insertion of a few shell scripts. In addition to the test monitoring system we use information from real production jobs to monitor the availability and quality of the GRID resources. The monitoring tools register the number of job resubmissions, the percentage of failed and finished jobs relative to all jobs on the CEs and determine the average values of waiting and running time for the involved GRID queues. CEs which do not meet the set criteria can be removed from the production chain by including them in an exception table. All of these monitoring actions lead to a more reliable and faster execution of MC requests.

  14. One drop chemical derivatization--DESI-MS analysis for metabolite structure identification.

    PubMed

    Lubin, Arnaud; Cabooter, Deirdre; Augustijns, Patrick; Cuyckens, Filip

    2015-07-01

    Structural elucidation of metabolites is an important part during the discovery and development process of new pharmaceutical drugs. Liquid Chromatography (LC) in combination with Mass Spectrometry (MS) is usually the technique of choice for structural identification but cannot always provide precise structural identification of the studied metabolite (e.g. site of hydroxylation and site of glucuronidation). In order to identify those metabolites, different approaches are used combined with MS data including nuclear magnetic resonance, hydrogen/deuterium exchange and chemical derivatization followed by LC-MS. Those techniques are often time-consuming and/or require extra sample pre-treatment. In this paper, a fast and easy to set up tool using desorption electrospray ionization-MS for metabolite identification is presented. In the developed method, analytes in solution are simply dried on a glass plate with printed Teflon spots and then a single drop of derivatization mixture is added. Once the spot is dried, the derivatized compound is analyzed. Six classic chemical derivatizations were adjusted to work as a one drop reaction and applied on a list of compounds with relevant functional groups. Subsequently, two successive reactions on a single spot of amoxicillin were tested and the methodology described was successfully applied on an in vitro incubated alprazolam metabolite. All reactions and analyses were performed within an hour and gave useful structural information by derivatizing functional groups, making the method a time-saving and efficient tool for metabolite identification if used in addition or in some cases as an alternative to common methods.

  15. 25 Jahre - Institut fuer Geodaesie, Teil 1: Wissenschaftliche Beitraege und Berichte (25 Years - Institute of Geodesy, Part 1: Scientific Contributions and Reports)

    DTIC Science & Technology

    2000-01-01

    des Dispersionswinkels zur Bestimmung der Refraktion. AVN 100, S. 51-62, 1993 HAMMING, R., W.: Digitale Filter. VCH-Verlag, Weinheim 1987 HAMPEL, F...KRONMOLLER, H.: Digitale Signalverarbeitung. Springer-Verlag, Berlin 1991 KUHLMANN, H.: Ein Beitrag zur Oberwachung von Briickenbauwerken mit...1987), das Europdische Referenzsystem - EUREF (SEEGER/ALTINER/ENGELHARDT/FRANKE/HABRICH/SCHLC- TER 1998) und das Sistema di Referencia del America del

  16. Längengrad. Die wahre Geschichte eines einsamen Genies, welches das größte wissenschaftliche Problem seiner Zeit löste.

    NASA Astrophysics Data System (ADS)

    Sobel, D.

    This book is a German translation, by M. Fienbork, from the American original "Longitude", published in 1995. It tells the story of John Harrison (1693 - 1776), the inventor of a chronometer for precise time determination onboard of ships.

  17. DESI-Detection of early-season invasives (software-installation manual and user's guide version 1.0)

    USGS Publications Warehouse

    Kokaly, Raymond F.

    2011-01-01

    This report describes a software system for detecting early-season invasive plant species, such as cheatgrass. The report includes instructions for installing the software and serves as a user's guide in processing Landsat satellite remote sensing data to map the distributions of cheatgrass and other early-season invasive plants. The software was developed for application to the semi-arid regions of southern Utah; however, the detection parameters can be altered by the user for application to other areas.

  18. Development of a scanning transmission x-ray microscope for the beamline P04 at PETRA III DESY

    SciTech Connect

    Andrianov, Konstantin; Ewald, Johannes; Nisius, Thomas; Wilhein, Thomas; Lühl, Lars; Malzer, Wolfgang; Kanngießer, Birgit

    2016-01-28

    We present a scanning transmission x-ray microscope (STXM) built on top of our existing modular platform for high resolution imaging experiments. This platform consists of up to three separate vacuum chambers and custom designed piezo stages. These piezo stages are able to move precisely in x-, y- and z-direction, this makes it possible to adjust the components for different imaging modes. During recent experiments the endstation was operated mainly as a transmission x-ray microscope (TXM) [1, 2].

  19. Desi Women on the Forty Acres: Exploring Intergenerational Issues and Identity Development of South Asian American College Students

    ERIC Educational Resources Information Center

    Ruzicka, Smita Sundaresan

    2011-01-01

    South Asian Americans are one of the fastest growing sub-groups within the Asian American population in the United States today. Between 1960 and 1990, the South Asian American population witnessed an increase of approximately 900% (Leonard, 1997). This increase in population also corresponds with the increase in South Asian American students…

  20. 21 CFR 330.12 - Status of over-the-counter (OTC) drugs previously reviewed under the Drug Efficacy Study (DESI).

    Code of Federal Regulations, 2013 CFR

    2013-04-01

    ... manufacturers and distributors of all OTC drugs effect changes in their formulations and/or labeling to bring... give increased assurance that the drug will have its intended effect, yet not raise or contribute any... 21 Food and Drugs 5 2013-04-01 2013-04-01 false Status of over-the-counter (OTC) drugs...

  1. 21 CFR 330.12 - Status of over-the-counter (OTC) drugs previously reviewed under the Drug Efficacy Study (DESI).

    Code of Federal Regulations, 2012 CFR

    2012-04-01

    ... manufacturers and distributors of all OTC drugs effect changes in their formulations and/or labeling to bring... give increased assurance that the drug will have its intended effect, yet not raise or contribute any... 21 Food and Drugs 5 2012-04-01 2012-04-01 false Status of over-the-counter (OTC) drugs...

  2. 21 CFR 330.12 - Status of over-the-counter (OTC) drugs previously reviewed under the Drug Efficacy Study (DESI).

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... manufacturers and distributors of all OTC drugs effect changes in their formulations and/or labeling to bring... give increased assurance that the drug will have its intended effect, yet not raise or contribute any... 21 Food and Drugs 5 2011-04-01 2011-04-01 false Status of over-the-counter (OTC) drugs...

  3. 21 CFR 330.12 - Status of over-the-counter (OTC) drugs previously reviewed under the Drug Efficacy Study (DESI).

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... manufacturers and distributors of all OTC drugs effect changes in their formulations and/or labeling to bring... give increased assurance that the drug will have its intended effect, yet not raise or contribute any... 21 Food and Drugs 5 2010-04-01 2010-04-01 false Status of over-the-counter (OTC) drugs...

  4. 21 CFR 330.12 - Status of over-the-counter (OTC) drugs previously reviewed under the Drug Efficacy Study (DESI).

    Code of Federal Regulations, 2014 CFR

    2014-04-01

    ... manufacturers and distributors of all OTC drugs effect changes in their formulations and/or labeling to bring... give increased assurance that the drug will have its intended effect, yet not raise or contribute any... 21 Food and Drugs 5 2014-04-01 2014-04-01 false Status of over-the-counter (OTC) drugs...

  5. Liquid Chromatography Electrospray Ionization Mass Spectrometric (LC-ESI-MS) and Desorption Electrospray Ionization Mass Spectrometric (DESI-MS) Identification of Chemical Warfare Agents in Consumer Products

    DTIC Science & Technology

    2007-06-01

    au-dessus des 6chantillons de semoule de mais et d’huile de soja ensemenc6s ont &6 6chantillonn6s avec des fibres SPME; ces fibres ont &6 analys6s au...6chantillons d’eau embouteill6e. Les vides au-dessus des 6chantillons de semoule de mais et d’huile de soja ensemencds ont 6t6 6chantillonn~s avec...des fibres SPNM. L’analyse directe des fibres SPME ayant 6t6 exposes dans le vide au-dessus des 6chantillons de la semoule de mais et I’huile de soja

  6. Desorption Electrospray Ionization Mass Spectrometry (DESI-MS) Analysis of Organophosphorus Chemical Warfare Agents: Rapid Acquisition of Time-Aligned Parallel (TAP) Fragmentation Data

    DTIC Science & Technology

    2010-06-01

    mobilité ionique (SMI) et de spectroscopie de masse en tandem (SMn, où n=2 ou 3) pour un composé individuel. On a obtenu des profils de mobilité ionique...d’une minute, les agents chimiques utilisés pour l’enrichissement grâce à ces données de mobilité ionique et de spectrométrie de masse. On prévoit...chimique organophosphorés, on a obtenu des données de spectrométrie de mobilité ionique (SMI) et de spectroscopie de masse en tandem (SMn, où n=2 ou 3

  7. Development and Applications of Liquid Sample Desorption Electrospray Ionization Mass Spectrometry

    NASA Astrophysics Data System (ADS)

    Zheng, Qiuling; Chen, Hao

    2016-06-01

    Desorption electrospray ionization mass spectrometry (DESI-MS) is a recent advance in the field of analytical chemistry. This review surveys the development of liquid sample DESI-MS (LS-DESI-MS), a variant form of DESI-MS that focuses on fast analysis of liquid samples, and its novel analy-tical applications in bioanalysis, proteomics, and reaction kinetics. Due to the capability of directly ionizing liquid samples, liquid sample DESI (LS-DESI) has been successfully used to couple MS with various analytical techniques, such as microfluidics, microextraction, electrochemistry, and chromatography. This review also covers these hyphenated techniques. In addition, several closely related ionization methods, including transmission mode DESI, thermally assisted DESI, and continuous flow-extractive DESI, are briefly discussed. The capabilities of LS-DESI extend and/or complement the utilities of traditional DESI and electrospray ionization and will find extensive and valuable analytical application in the future.

  8. Function of desiccate in gustatory sensilla of drosophila melanogaster

    PubMed Central

    Kawano, Takeshi; Ryuda, Masasuke; Matsumoto, Hitoshi; Ochiai, Masanori; Oda, Yasunori; Tanimura, Teiichi; Csikos, Gyorge; Moriya, Megumi; Hayakawa, Yoichi

    2015-01-01

    Desiccate (Desi), initially discovered as a gene expressing in the epidermis of Drosophila larvae for protection from desiccation stress, was recently found to be robustly expressed in the adult labellum; however, the function, as well as precise expression sites, was unknown. Here, we found that Desi is expressed in two different types of non-neuronal cells of the labellum, the epidermis and thecogen accessory cells. Labellar Desi expression was significantly elevated under arid conditions, accompanied by an increase in water ingestion by adults. Desi overexpression also promoted water ingestion. In contrast, a knockdown of Desi expression reduced feeding as well as water ingestion due to a drastic decrease in the gustatory sensillar sensitivity for all tested tastants. These results indicate that Desi helps protect insects from desiccation damage by not only preventing dehydration through the integument but also accelerating water ingestion via elevated taste sensitivities of the sensilla. PMID:26610608

  9. Das Allgemeine Statistische Archiv

    NASA Astrophysics Data System (ADS)

    Rinne, Horst

    Das Allgemeine Statistische Archiv1, nachfolgend kurz Archiv genannt, ist die älteste, ausschließlich der Statistik gewidmete deutschsprachige wissenschaftliche Fachzeitschrift. Sie ist gut zwanzig Jahre älter als die Deutsche Statistische Gesellschaft, zu deren Publikationsorgan sie mit der Gründung der Gesellschaft im Jahre 1911 wurde. Zeitschrift und Gesellschaft blicken auf eine sehr wechselvolle, aber erfolgreiche gemeinsame Geschichte zurück. Die wissenschaftliche Arbeit der Gesellschaft ist im Archiv und seinen Sonderheften für nachfolgende Generationen dokumentiert.

  10. Desorption electrospray ionization mass spectrometry of intact bacteria

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Desorption electrospray ionization (DESI) mass spectrometry (MS) was used to differentiate 7 bacterial species based on their measured DESI-mass spectral profile. Both Gram positive and Gram negative bacteria were tested and included Escherichia coli, Staphyloccocus aureus, Enterococcus sp., Bordete...

  11. Europäisches Organ der Festkörperforschung und DDR-Devisenbringer Die Zeitschrift Physica Status Solidi im Kalten Krieg

    NASA Astrophysics Data System (ADS)

    Hoffmann, Dieter

    Mit dem Ziele, ein einheitliches internationales Organ der Festkörperphysik für den europäischen Raum zu schaffen, das eine rasche Publikation der für das Festkörpergebiet repräsentative Arbeiten ermöglicht, wird durch ein internationales Herausgebergremium eine neue wissenschaftliche Zeitschrift gegründet.

  12. TÜV - Zertifizierungen in der Life Science Branche

    NASA Astrophysics Data System (ADS)

    Schaff, Peter; Gerbl-Rieger, Susanne; Kloth, Sabine; Schübel, Christian; Daxenberger, Andreas; Engler, Claus

    Life Sciences [1] (Lebenswissenschaften) sind ein globales Innovationsfeld mit Anwendungen der Bio- und Medizinwissenschaften, der Pharma-, Chemie-, Kosmetik- und Lebensmittelindustrie. Diese Branche zeichnet sich durch eine stark interdisziplinäre Ausrichtung aus, mit Anwendung wissenschaftlicher Erkenntnisse und Einsatz von Ausgangsstoffen aus der modernen Biologie, Chemie und Humanmedizin sowie gezielter marktwirtschaftlich orientierter Arbeit.

  13. Lateral resolution of desorption nanoelectrospray: a nanospray tip without nebulizing gas as a source of primary charged droplets.

    PubMed

    Hartmanová, L; Lorencová, I; Volný, M; Fryčák, P; Havlíček, V; Chmelíčková, H; Ingr, T; Lemr, K

    2016-04-07

    Desorption nanoelectrospray (nanoDESI) was described in 2007 and it represents a miniaturized version of desorption electrospray without the assistance of the nebulizing gas. Compared to DESI, a nanoelectrospray tip (2 ± 1 μm I.D.) generates primary charged droplets of smaller sizes and lower spray liquid flow rates. This is the first report on utilization of nanoDESI for mass spectrometry imaging (MSI). Its new coupling with a Q-TOF instrument allowed faster mass spectra acquisition (4 Hz) essential for MSI of fine surface details. To evaluate nanoDESI potential for mass spectrometry imaging, etched glass substrates with Rhodamine B patterns of different dimensions were prepared. The Rhodamine B lines were analysed in 1D scanning mode and their width was determined experimentally by nanoDESI measurement. The experimental data revealed that the lateral resolution of nanoDESI is close to 30 μm along the x-axis (orthogonal to the inlet). 2D scanning mode confirmed good resolution along both axes as dye squares with dimensions about 60 μm × 60 μm were easily distinguished. The low flow rate of the spray liquid reduced undesirable analyte washing effects, which allowed repeated scanning analysis of the surface. The presented results demonstrate the applicability of nanoDESI for high surface resolution mass spectrometry imaging.

  14. Depth-Resolved Nanospray Desorption Electrospray Ionization Mass Spectrometry in Biofilms

    DTIC Science & Technology

    2015-11-16

    use nano-DESI (nano-capillary system) sensor to collect cells at different depth in the natural biofilms in addition to MS work. 1 Depth-Resolved...SECURITY CLASSIFICATION OF: The goal of this project was to develop a nano-DESI sensor which can be used to obtain in situ, depth-resolved analyses of...Biofilms Report Title The goal of this project was to develop a nano-DESI sensor which can be used to obtain in situ, depth-resolved analyses of

  15. Shotgun Approach for Quantitative Imaging of Phospholipids Using Nanospray Desorption Electrospray Ionization Mass Spectrometry

    SciTech Connect

    Lanekoff, Ingela T.; Thomas, Mathew; Laskin, Julia

    2014-02-04

    Mass spectrometry imaging (MSI) has been extensively used for determining spatial distributions of molecules in biological samples, and there is increasing interest in using MSI for quantification. Nanospray desorption electrospray ionization, or nano-DESI, is an ambient MSI technique where a solvent is used for localized extraction of molecules followed by nanoelectrospray ionization. Doping the nano-DESI solvent with carefully selected standards enables online quantification during MSI experiments. In this proof-of-principle study, we demonstrate this quantification approach can be extended to provide shotgun-like quantification of phospholipids in thin brain tissue sections. Specifically, two phosphatidylcholine (PC) standards were added to the nano-DESI solvent for simultaneous imaging and quantification of 22 PC species observed in nano-DESI MSI. Furthermore, by combining the quantitative data obtained in the individual pixels, we demonstrate quantification of these PC species in seven different regions of a rat brain tissue section.

  16. Determination of T-2 and HT-2 toxins from maize by direct analysis in real time - mass spectrometry (DART-MS)

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Ambient desorption ionization techniques, such as laser desorption with electrospray ionization assistance (ELDI), direct analysis in real time (DART) and desorption electrospray ionization (DESI) have been developed as alternatives to traditional mass spectrometric-based methods. Such techniques al...

  17. JWST Primary Mirror Installation Complete

    NASA Video Gallery

    Completing the assembly of the primary mirror, which took place at NASA’s Goddard Space Flight Center in Greenbelt, Maryland, is a significant milestone and the culmination of over a decade of desi...

  18. High Energy Physics: Report of research accomplishments and future goals, FY 1983

    SciTech Connect

    Barish, B C

    1983-12-31

    Continuing research in high energy physics carried out by the group from the California Institute of Technology. The program includes research in theory, phenomenology, and experimental high energy physics. The experimental program includes experiments at SLAC, FERMILAB, and DESY.

  19. Improved Imaging Resolution in Desorption Electrospray Ionization Mass Spectrometry

    SciTech Connect

    Kertesz, Vilmos; Van Berkel, Gary J

    2008-01-01

    Imaging resolution of desorption electrospray ionization mass spectrometry (DESI-MS) was investigated using printed patterns on paper and thin-layer chromatography (TLC) plate surfaces. Resolution approaching 40 m was achieved with a typical DESI-MS setup, which is approximately 5 times better than the best resolution reported previously. This improvement was accomplished with careful control of operational parameters (particularly spray tip-to-surface distance, solvent flow rate, and spacing of lane scans). Also, an appropriately strong analyte/surface interaction and uniform surface texture on the size scale no larger that the desired imaging resolution were required to achieve this resolution. Overall, conditions providing the smallest possible effective desorption/ionization area in the DESI impact plume region and minimizing the analyte redistribution on the surface during analysis led to the improved DESI-MS imaging resolution.

  20. Remote mass spectrometric sampling of electrospray- and desorption electrospray-generated ions using an air ejector.

    PubMed

    Dixon, R Brent; Bereman, Michael S; Muddiman, David C; Hawkridge, Adam M

    2007-10-01

    A commercial air ejector was coupled to an electrospray ionization linear ion trap mass spectrometer (LTQ) to transport remotely generated ions from both electrospray (ESI) and desorption electrospray ionization (DESI) sources. We demonstrate the remote analysis of a series of analyte ions that range from small molecules and polymers to polypeptides using the AE-LTQ interface. The details of the ESI-AE-LTQ and DESI-AE-LTQ experimental configurations are described and preliminary mass spectrometric data are presented.

  1. Tissue Imaging Using Nanospray Desorption Electrospray Ionization Mass Spectrometry

    SciTech Connect

    Laskin, Julia; Heath, Brandi S.; Roach, Patrick J.; Cazares, Lisa H.; Semmes, O. John

    2012-01-03

    We present the first results showing the ambient imaging of biological samples in their native environment using nanospray desorption ionization (nanoDESI) mass spectrometry. NanoDESI is an ambient pressure ionization technique that enables precise control of ionization of molecules from substrates. We demonstrate highly sensitive and robust analysis of tissue samples with high spatial resolution (<12 {mu}m) without sample preparation, which will be essential for applications in clinical diagnostics, drug discovery, molecular biology, and biochemistry.

  2. Analysis of transcription profile to reveal altered signaling pathways following the overexpression of human desumoylating isopeptidase 2 in pancreatic cancer cells

    PubMed Central

    Fu, Yu-Yin; Kang, Yu-Huan; Shen, Cong-Cong; Wang, Rui-Xue; Yu, Lin; Li, Xin-Yue; Cui, Dan-Dan; Yang, Jin-Liang; Yao, Yu-Qin; Gou, Lan-Tu

    2016-01-01

    Human desumoylating isopeptidase 2 (DESI-2) is a member of the DESI family and contains a conserved PPPDE1 domain. Previous studies have demonstrated that DESI-2 overexpression may induce cell apoptosis. In the present study, differentially expressed genes were analyzed using a transcription microarray in DESI-2 overexpressing PANC-1 pancreatic cancer cells. A total of 45,033 genes were examined by microarray, which identified 1,766 upregulated and 1,643 downregulated genes. A series of altered signaling pathways were analyzed, in which certain essential signaling factors, including retinoid X receptor (RXR), BH3 interacting-domain death agonist, Ras homolog gene family member A (RhoA) and Rho-associated protein kinase, were further investigated at the protein level. The release of cytochrome c and the activation of caspase-3 were also detected by western blot analysis. Immunohistochemistry further revealed the expression features of RXR and RhoA in pancreatic ductal adenocarcinoma tissues with various DESI-2 expression levels. The results serve as a valuable reference for the further elucidation of the functions of DESI-2 in pancreatic cancer. PMID:28105175

  3. Fast analysis of high-energy compounds and agricultural chemicals in water with desorption electrospray ionization mass spectrometry.

    PubMed

    Mulligan, Christopher C; MacMillan, Denise K; Noll, Robert J; Cooks, R Graham

    2007-01-01

    Novel sampling and detection methods using desorption electrospray ionization (DESI) are examined in the detection of explosives (RDX, TNT, HMX, and TNB) and agricultural chemicals (atrazine, alachlor and acetochlor) from aqueous matrices and authentic contaminated groundwater samples. DESI allows analysis of solid and liquid compounds directly from surfaces of interest with little or no sample preparation. Significant savings in analysis time and sample preparation are realized. The methods investigated here include (i) immediate analysis of filter paper wetted with contaminated water samples without further sample preparation, (ii) rapid liquid-liquid extraction (LLE), and (iii) analyte extraction from contaminated groundwater samples on-site using solid-phase extraction (SPE) membranes, followed by direct DESI analysis of the membrane. The wetted filter paper experiment demonstrates the maximum sample throughput for DESI analysis of aqueous matrices but has inadequate sensitivity for some of these analytes. Both the LLE and the SPE methods have adequate sensitivity. The resulting SPE membranes and/or small volume solvent extracts produced in these experiments are readily transported to off-site facilities for direct analysis by DESI. This realizes a significant reduction in the costs of sample shipping compared with those for typical liter-sized samples of groundwater. Total analysis times for these preliminary DESI analyses are comparable with or shorter than those for GC/MS and limits of detection approach environmental action levels for these compounds while maintaining a modest relative standard deviation. Tandem mass spectrometric data is used to provide additional specificity as needed.

  4. Study of Electrochemical Reactions Using Nanospray Desorption Electrospray Ionization Mass Spectrometry

    SciTech Connect

    Liu, Pengyuan; Lanekoff, Ingela T.; Laskin, Julia; Dewald, Howard D.; Chen, Hao

    2012-07-03

    The combination of electrochemistry (EC) and mass spectrometry (MS) is a powerful analytical tool for studying mechanisms of redox reactions, identification of products and intermediates, and online derivatization/recognition of analytes. This work reports a new coupling interface for EC/MS by employing nanospray desorption electrospray ionization (nano-DESI), a recently developed ambient ionization method. We demonstrate online coupling of nano-DESI-MS with a traditional electrochemical flow cell, in which the electrolyzed solution emanating from the cell is ionized by nano-DESI for MS analysis. Furthermore, we show first coupling of nano-DESI-MS with an interdigitated array (IDA) electrode enabling chemical analysis of electrolyzed samples directly from electrode surfaces. Because of its inherent sensitivity, nano-DESI enables chemical analysis of small volumes and concentrations of sample solution. Specifically, good-quality signal of dopamine and its oxidized form, dopamine ortho-quinone, was obtained using 10 μL of 1 μM solution of dopamine on the IDA. Oxidation of dopamine, reduction of benzodiazepines, and electrochemical derivatization of thiol groups were used to demonstrate the performance of the technique. Our results show the potential of nano-DESI as a novel interface for electrochemical mass spectrometry research.

  5. Astronomen bei der Arbeit - Live-Konferenz mit La Palma

    NASA Astrophysics Data System (ADS)

    Beck, Paul G.

    2012-02-01

    "Wie kann man sich die nächtliche Arbeit eines Astronomen am Teleskop vorstellen?" Diese Frage stellen sich viele wissenschaftlich interessierte Menschen, die noch kein professionelles Observatorium besuchen konnten. Das multimediale Experiment "Call a Scientist" verband Besucher einer österreichischen Amateursternwarte live mit dem Großobservatorium in La Palma und brachte damit einer interessierten Öffentlichkeit seltene Einblicke in die Arbeitsweise der modernen Astronomie nahe.

  6. Zwergsatelliten und Sternriesen

    NASA Astrophysics Data System (ADS)

    Baade, Dietrich; Kuschnig, Rainer

    2017-03-01

    Leuchtkräftige Sterne sind schwierig: Fär Fotometrie mit großen Teleskopen sind sie zu hell, und ihre geringe Zahl macht konventionelle Lösungen unwirtschaftlich, besonders im Weltraum, wo die äußerste Präzision gegeben wäre. Mit einer Mini-Armada von Nanosatelliten haben Ingenieure und Astronomen aus Kanada, Österreich und Polen nun die Lösung gefunden - auch schon für viele wissenschaftliche Fragen.

  7. Chemical Characterization of Crude Petroleum Using Nanospray Desorption Electrospray Ionization Coupled with High-Resolution Mass Spectrometry

    SciTech Connect

    Eckert, Peter A.; Roach, Patrick J.; Laskin, Alexander; Laskin, Julia

    2012-02-07

    Nanospray desorption electrospray ionization (nano-DESI) combined with high-resolution mass spectrometry was used for the first time for the analysis of liquid petroleum crude oil samples. The analysis was performed in both positive and negative ionization modes using three solvents one of which (acetonitrile/toluene mixture) is commonly used in petroleomics studies while two other polar solvents (acetonitrile/water and methanol/water mixtures) are generally not compatible with petroleum characterization using mass spectrometry. The results demonstrate that nano-DESI analysis efficiently ionizes petroleum constituents soluble in a particular solvent. When acetonitrile/toluene is used as a solvent, nano-DESI generates electrospray-like spectra. In contrast, strikingly different spectra were obtained using acetonitrile/water and methanol/water. Comparison with the literature data indicates that these solvents selectively extract water-soluble constituents of the crude oil. Water-soluble compounds are predominantly observed as sodium adducts in nano-DESI spectra indicating that addition of sodium to the solvent may be a viable approach for efficient ionization of water-soluble crude oil constituents. Nano-DESI enables rapid screening of different classes of compounds in crude oil samples using solvents that are rarely used for petroleum characterization.

  8. Feasibility of desorption atmospheric pressure photoionization and desorption electrospray ionization mass spectrometry to monitor urinary steroid metabolites during pregnancy.

    PubMed

    Vaikkinen, Anu; Rejšek, Jan; Vrkoslav, Vladimír; Kauppila, Tiina J; Cvačka, Josef; Kostiainen, Risto

    2015-06-23

    Steroids have important roles in the progress of pregnancy, and their study in maternal urine is a non-invasive method to monitor the steroid metabolome and its possible abnormalities. However, the current screening techniques of choice, namely immunoassays and gas and liquid chromatography-mass spectrometry, do not offer means for the rapid and non-targeted multi-analyte studies of large sample sets. In this study, we explore the feasibility of two ambient mass spectrometry methods in steroid fingerprinting. Urine samples from pregnant women were screened by desorption electrospray ionization (DESI) and desorption atmospheric pressure photoionization (DAPPI) Orbitrap high resolution mass spectrometry (HRMS). The urine samples were processed by solid phase extraction for the DESI measurements and by enzymatic hydrolysis and liquid-liquid-extraction for DAPPI. Consequently, steroid glucuronides and sulfates were detected by negative ion mode DESI-HRMS, and free steroids by positive ion mode DAPPI-HRMS. In DESI, signals of eleven steroid metabolite ions were found to increase as the pregnancy proceeded, and in DAPPI ten steroid ions showed at least an order of magnitude increase during pregnancy. In DESI, the increase was seen for ions corresponding to C18 and C21 steroid glucuronides, while DAPPI detected increased excretion of C19 and C21 steroids. Thus both techniques show promise for the steroid marker screening in pregnancy.

  9. Ammonium Bicarbonate Addition Improves the Detection of Proteins by Desorption Electrospray Ionization Mass Spectrometry

    NASA Astrophysics Data System (ADS)

    Honarvar, Elahe; Venter, Andre R.

    2017-03-01

    The analysis of protein by desorption electrospray ionization mass spectrometry (DESI-MS) is considered impractical due to a mass-dependent loss in sensitivity with increase in protein molecular weights. With the addition of ammonium bicarbonate to the DESI-MS analysis the sensitivity towards proteins by DESI was improved. The signal to noise ratio (S/N) improvement for a variety of proteins increased between 2- to 3-fold relative to solvent systems containing formic acid and more than seven times relative to aqueous methanol spray solvents. Three methods for ammonium bicarbonate addition during DESI-MS were investigated. The additive delivered improvements in S/N whether it was mixed with the analyte prior to sample deposition, applied over pre-prepared samples, or simply added to the desorption spray solvent. The improvement correlated well with protein pI but not with protein size. Other ammonium or bicarbonate salts did not produce similar improvements in S/N, nor was this improvement in S/N observed for ESI of the same samples. As was previously described for ESI, DESI also caused extensive protein unfolding upon the addition of ammonium bicarbonate.

  10. Age-Dependent Variation in Hormonal Concentration and Biochemical Constituents in Blood Plasma of Indian Native Fowl

    PubMed Central

    Biswas, Avishek; Mohan, Jag; Sastry, Kochigant Venkata Hanumant

    2010-01-01

    This experiment was to investigate the age-related changes in hormonal concentration and biochemical constituents of blood plasma in Indian native desi fowl. One hundred and sixty two (54 from each breed, i.e., Kadaknath (KN), Aseel peela (AP), and White leghorn (WLH)) day-old female chicks were randomly divided into nine groups each of 18 chicks (3 groups × 3 replicates). WLH was taken in this study to compare the characteristics of Indian native desi fowl. The highest level of estrogen hormone in WLH and desi fowl in blood plasma was occurred at 18 and 24 wks of age, respectively. Whereas, the peak of progesterone hormone in WLH hens noticed around 24 wks, in case of desi fowls, it was at 30 wks of age. Irrespective of the breed, the hormonal profile of Triiodothyronine (T3) and Thyroxine (T4) in blood plasma was found highest around 6 to 12 wks of age. Activities of acid phosphatase (ACP) increased with the reduction of alkaline phosphate (ALP) activities at different time intervals. Irrespective of the breed, transaminases (glutamic oxaloacetic transaminase (GOT) and glutamic pyruvic transaminase (GPT)) activities of blood plasma increased linearly with the advancement of the age. From this study, it may be concluded that sexual maturity of the Indian native desi fowl occurred nearly 6 wk later (24 wk) than WLH. PMID:21234314

  11. Online coupling of electrochemical reactions with liquid sample desorption electrospray ionization-mass spectrometry.

    PubMed

    Li, Jiwen; Dewald, Howard D; Chen, Hao

    2009-12-01

    The combination of electrochemistry (EC) and mass spectrometry (MS) is a powerful analytical tool to study redox reactions. This work reports the online coupling of a thin-layer electrochemical flow cell with liquid sample desorption electrospray ionization mass spectrometry (DESI-MS) and its applications in investigating various electrochemical reactions of biological molecules such as oxidative formation and reductive cleavage of disulfide bonds and online derivatization of peptides/proteins. As a result of the direct sampling nature of DESI, several useful features of such a coupling have been found, including simple instrumentation, fast response time (e.g., 3.6 s in the case of dopamine oxidation), freedom to choose a favorable ionization mode of DESI or traditional electrolysis solvent systems, and the absence of background signal possibly resulting from ionization when the cell is off (e.g., in the case of dopamine oxidation). More importantly, with the use of this new coupling apparatus, three disulfide bonds of insulin were fully cleaved by electrolytic reduction and both the A and B chains of the protein were successfully detected online by DESI-MS. In addition, online tagging of free cysteine residues of peptides/proteins employing electrogenerated dopamine o-quinone can be performed. These revealed characteristics of the coupling along with examined electrochemical reactions suggest that EC/DESI-MS has good potential in bioanalysis.

  12. Non-proximate detection of small and large molecules by desorption electrospray ionization and desorption atmospheric pressure chemical ionization mass spectrometry: instrumentation and applications in forensics, chemistry, and biology.

    PubMed

    Cotte-Rodríguez, Ismael; Mulligan, Christopher C; Cooks, R Graham

    2007-09-15

    Ambient surfaces are examined by mass spectrometry at distances of up to 3 m from the instrument without any prior sample preparation. Non-proximate versions of the desorption electrospray ionization (DESI) and desorption atmospheric pressure chemical ionization experiments are shown to allow rapid, sensitive, and selective detection of trace amounts of active ingredients in pharmaceutical drug formulations, illicit drugs (methamphetamine, cocaine, and diacetylmorphine), organic salts, peptides, chemical warfare agent simulants, and other small organic compounds. Utilizing an ion transport tube to transport analyte ions to the mass spectrometer, nonproximate DESI allows one to collect high-quality, largely interference-free spectra with signal-to-noise (S/N) ratios of more than 100. High selectivity is achieved by tandem mass spectrometry and by reactive DESI, a variant experiment in which reagents added into the solvent spray allow bond-forming reactions with the analyte. Ion/molecule reactions were found to selectively suppress the response of mixture components other than the analyte of interest in nonproximate-DESI. Flexible ion transport tubing is also investigated, allowing performance similar to stainless steel tubing in the transport of ions from the sample to the mass spectrometer. Transfer tube temperature effects are examined. A multiple sprayer DESI source capable of analyzing a larger sample area was evaluated to decrease the sampling time and increase sample throughput. Low nanogram detection limits were obtained for the compounds studied from a wide variety of surfaces, even those present in complex matrixes.

  13. Fifty not out

    NASA Astrophysics Data System (ADS)

    2009-12-01

    What have the DESY laboratory in Germany, Richard Feynman's visionary lecture on nanotechnology, the discovery of the Aharonov-Bohm effect and the "two cultures" debate got in common? The answer is that they are all half a century old this year. The DESY lab was officially launched on 18 December 1959 and is marking its 50th anniversary with a series of events that included the official opening of the PETRA III synchrotron last month. Initially a particle-physics lab pure and simple, DESY is now changing its focus to accelerator science and is set to open its massive new 1bn European X-ray Free Electron Laser in 2014 (p12).

  14. Computing at h1 - Experience and Future

    NASA Astrophysics Data System (ADS)

    Eckerlin, G.; Gerhards, R.; Kleinwort, C.; KrÜNer-Marquis, U.; Egli, S.; Niebergall, F.

    The H1 experiment has now been successfully operating at the electron proton collider HERA at DESY for three years. During this time the computing environment has gradually shifted from a mainframe oriented environment to the distributed server/client Unix world. This transition is now almost complete. Computing needs are largely determined by the present amount of 1.5 TB of reconstructed data per year (1994), corresponding to 1.2 × 107 accepted events. All data are centrally available at DESY. In addition to data analysis, which is done in all collaborating institutes, most of the centrally organized Monte Carlo production is performed outside of DESY. New software tools to cope with offline computing needs include CENTIPEDE, a tool for the use of distributed batch and interactive resources for Monte Carlo production, and H1 UNIX, a software package for automatic updates of H1 software on all UNIX platforms.

  15. Desorption electrospray ionization-based imaging of interaction between vascular graft and human body.

    PubMed

    Bodzon-Kulakowska, Anna; Drabik, Anna; Mystkowska, Joanna; Chlabicz, Michal; Gacko, Marek; Dabrowski, Jan R; Mielczarek, Przemyslaw; Silberring, Jerzy; Suder, Piotr

    2016-01-01

    The desorption electrospray ionization-mass spectrometry imaging (DESI-MSI) is known as a fast and convenient MS-based method for lipid imaging in various biological materials. Here, we applied this technique to visualize lipid distribution in a vascular graft removed from a patient's body. This is a good example of the DESI system capabilities toward imaging of interaction between artificial material and living tissues. Detailed analysis allowed for visualization of the spatial distribution of selected lipids in this implanted, artificial material. Not only DESI-MSI allowed visualization of lipid distribution in the investigated material but also enabled identification of the detected molecular species using MS/MS. Here, this technique was successfully used to evaluate the saturation and spatial distribution of endogenous lipids in the artificial vascular graft. Unambiguous identification of the lipids was done with the aid of fragmentation procedure. We also showed that various lipids localize preferably in graft material or internal plaque existing inside the graft.

  16. Surface-enhanced transmission mode desorption electrospray ionization: increasing the specificity of ambient ionization mass spectrometric analyses.

    PubMed

    Chipuk, Joseph E; Gelb, Michael H; Brodbelt, Jennifer S

    2010-01-01

    Fabrication and utilization of mesh materials specifically designed to capture analytes from solution facilitates the direct coupling of affinity capture and ambient ionization mass spectrometry via surface-enhanced transmission mode desorption electrospray ionization (TM-DESI). Incorporation of photolabile groups within the linkage between the mesh surface and the covalently modified reactive probe affords facile release of mass tagged analytes directly to mesh surfaces that have been rinsed free of matrix interferences. The approach introduces increased specificity to the already rapid TM-DESI analysis technique, resulting in a powerful tool for high-throughput screening of targeted analytes. Specific capture of thiols is discussed herein, but the surface-enhanced TM-DESI technique can be readily extended to other functional groups by alteration of the capture agent.

  17. Coupling desorption electrospray ionization with solid-phase microextraction for screening and quantitative analysis of drugs in urine.

    PubMed

    Kennedy, Joseph H; Aurand, Craig; Shirey, Robert; Laughlin, Brian C; Wiseman, Justin M

    2010-09-01

    Direct analysis of silica C(18)-coated solid-phase microextraction (SPME) fibers using desorption electrospray ionization mass spectrometry (DESI-MS) for the purpose of analyzing drugs from raw urine is presented. The method combines a simple, inexpensive, and solvent-less sample preparation technique with the specificity and speed of DESI-MS and MS/MS. Extraction of seven drugs from raw urine is performed using specially designed SPME fibers coated uniformly with silica-C(18) stationary phase. Each SPME device is inserted into unprocessed urine under gentle agitation and, then, removed, rinsed, and analyzed directly by DESI-MS (MS/MS). Rapid screening over a wide mass range is afforded by coupling the method with a time of flight (TOF) mass spectrometer while quantitative analysis is performed using selected reaction monitoring (SRM) using a triple quadrupole mass spectrometer. The performance of the SPME DESI-MS/MS method was evaluated by preparing calibration standards and quality control (QC) samples of the seven drug compounds from urine over a range from 20 to 1000 ng/mL, with the exception of meprobamate which was prepared from 200 to 10000 ng/mL. The calibration curves constructed for each analyte had an R(2) > 0.99. The range of precision (%CV) and accuracy values (% bias) for low QC samples was 1-11% and 3-38%, respectively. Precision and accuracy values for high QC samples range from 0.9 to 8% and -31 to -8%. Results from urine specimens of actual exposure to drugs screened using the SPME DESI-MS/MS method showed good agreement with the conventional immunoassays and GC/MS analysis. Liquid desorption of the SPME fiber followed by LC/MS/MS also showed good agreement with the SPME DESI-MS/MS method.

  18. Desorption electrospray ionization mass spectrometry for trace analysis of agrochemicals in food.

    PubMed

    García-Reyes, Juan F; Jackson, Ayanna U; Molina-Díaz, Antonio; Cooks, R Graham

    2009-01-15

    Desorption electrospray ionization (DESI) is applied to the rapid, in situ, direct qualitative and quantitative (ultra)trace analysis of agrochemicals in foodstuffs. To evaluate the potential of DESI mass spectrometry (MS) in toxic residue testing in food, 16 representative multiclass agricultural chemicals (pesticides, insecticides, herbicides, and fungicides) were selected (namely, ametryn, amitraz, azoxystrobin, bitertanol, buprofezin, imazalil, imazalil metabolite, isofenphos-methyl, malathion, nitenpyram, prochloraz, spinosad, terbuthylazine, thiabendazole, and thiacloprid). The DESI-MS experiments were performed using 3 microL of solution spotted onto conventional smooth poly(tetrafluoroethylene) (PTFE) surfaces, with examination by MS and tandem mass spectrometry (MS/MS) using an ion trap mass spectrometer. Optimization of the spray solvent led to the use of acetonitrile/water (80:20) (v/v), with 1% formic acid. Most of the compounds tested showed remarkable sensitivity in the positive ion mode, approaching that attainable with conventional direct infusion electrospray mass spectrometry. To evaluate the potential of the proposed approach in real samples, different experiments were performed including the direct DESI-MS/MS analysis of fruit peels and also of fruit/vegetable extracts. The results proved that DESI allows the detection and confirmation of traces of agrochemicals in actual market-purchased samples. In addition, MS/MS confirmation of selected pesticides in spiked vegetable extracts was obtained at absolute levels as low as 1 pg for ametryn. Quantitation of imazalil residues was also undertaken using an isotopically labeled standard. The data obtained were in agreement with those from the liquid chromatography mass spectrometry (LC-MS) reference method, with relative standard deviation (RSD) values consistently below 15%. The results obtained demonstrate the sensitivity of DESI as they meet the stringent European Union pesticide regulation

  19. Multistage Reactive Transmission-Mode Desorption Electrospray Ionization Mass Spectrometry

    NASA Astrophysics Data System (ADS)

    Peters, Kevin C.; Comi, Troy J.; Perry, Richard H.

    2015-09-01

    Elucidating reaction mechanisms is important for advancing many areas of science such as catalyst development. It is often difficult to probe fast reactions at ambient conditions with high temporal resolution. In addition, systems involving reagents that cross-react require analytical methods that can minimize interaction time and specify their order of introduction into the reacting system. Here, we explore the utility of transmission mode desorption electrospray ionization (TM-DESI) for reaction monitoring by directing a microdroplet spray towards a series of meshes with micrometer-sized openings coated with reagents, an approach we call multistage reactive TM-DESI (TM n -DESI, where n refers to the number of meshes; n = 2 in this report). Various stages of the reaction are initiated at each mesh surface, generating intermediates and products in microdroplet reaction vessels traveling towards the mass spectrometer. Using this method, we investigated the reactivity of iron porphyrin catalytic hydroxylation of propranolol and other substrates. Our experimental results indicate that TM n -DESI provides the ability to spatially separate reagents and control their order of introduction into the reacting system, thereby minimizing unwanted reactions that lead to catalyst deactivation and degradation products. In addition, comparison with DESI-MS analyses (the Zare and Latour laboratories published results suggesting accessible reaction times <1 ms) of the reduction of dichlorophenolindophenol by L-ascorbic acid suggest that TM 1 -DESI can access reaction times less than 1 ms. Multiple meshes allow sequential stages of desorption/ionization per MS scan, increasing the number of analytes and reactions that can be characterized in a single experiment.

  20. Clinicians’ concerns about decision support interventions for patients facing breast cancer surgery options: understanding the challenge of implementing shared decision‐making

    PubMed Central

    Caldon, Lisa J.M.; Collins, Karen A.; Reed, Malcolm W.; Sivell, Stephanie; Austoker, Joan; Clements, Alison M.; Patnick, Julietta; Elwyn, Glyn

    2011-01-01

    Abstract Background  There is interest in interventions that provide support for patients facing challenging decisions, such as the choice between mastectomy and breast conservation surgery for breast cancer. However, it is difficult to implement these interventions. One potential source of resistance is the attitudes of clinicians. Objective  To examine specialist breast clinicians’ opinions about the provision of decision support interventions (DesIs) for patients. Methods  As part of the development of a web‐based DesI (BresDex), semi‐structured interviews were conducted with specialist clinicians [breast surgeons, breast care nurses (BCNs) and oncologists] from four breast units in a UK region, and speciality national opinion leaders. Interviews were recorded, transcribed and analysed using the Framework approach. Results  A majority of the 24 clinicians interviewed did not have a working knowledge of DesIs and were ambivalent or sceptical. Many expressed conflicting opinions: they noted the potential benefits, but at the same time expressed reservations about information overlap, overload and about content that they considered inappropriate. Many wanted access to DesIs to be always under clinical supervision. In particular, they were uncertain as regards how DeSIs could be tailored to individual patients’ needs and also accommodate clinical practice variation. BCNs were particularly concerned that DesIs might induce patient anxiety and replace their role. Conclusions  The concept of providing interventions to support patients in decision‐making tasks generated concern, defensiveness and scepticism. These attitudes will be a significant barrier. Implementation efforts will need to recognize and address these issues if these interventions are to become embedded in clinical practice. PMID:21029281

  1. Quantifying the performance of charge-coupled devices in ambient conditions - Oral presentation

    SciTech Connect

    Dungee, Ryan

    2015-08-22

    Telescope surveys have given us a great deal of information about our universe, but the images they capture carry with them an inherent limitation. The question then is how do we take this information to the next level? The answer: the Dark Energy Spectroscopic Instrument (DESI). DESI is an instrument that will measure the distance to tens of millions of galaxies in our night sky. This information can be combined with already existing images to construct a three dimensional map of our universe providing a great deal of new opportunities for cosmological research. The DESI guidance system consists of 10 detectors called charge-coupled devices (CCDs). Each CCD is made of silicon atoms that emit electrons when struck with light, the electrons are counted and then used to reconstruct an image. But, CCDs suffer from an issue known as ‘dark current’ which are false counts that come from thermal motions of the silicon atoms. This is particularly problematic since they contribute to the uncertainty of a measurement without contributing to our signal. This causes a drop in the signal to noise ratio, a value that needs to be maximized in order to meet DESI’s high precision requirements. This summer was spent ensuring the DESI guidance system would meet its specifications. Data was collected using a CCD of the same type that would be used on DESI and the effectiveness of dark current removal was tested. Exposures were taken for a wide range of temperatures and exposure lengths and a number of dark current removal methods were implemented. While further testing is required, the initial results are quite promising and the DESI guidance system is on track to meet its specifications

  2. Beam tests of a MWPC with CsI photocathode for Cherenkov Ring Imaging

    SciTech Connect

    Krizan, P.; Staric, M.; Stanovnik, A.; Cindro, M.; Skrk, D.; Zavrtanik, M.; Korpar, S.; Hamacher, T.; Michel, E.

    1995-08-01

    A 24 x 24 cm{sup 2} asymmetric multiwire proportional chamber, with 7.5 x 7.5 mm{sup 2} photosensitive CsI pads, has been tested with Cherenkov radiation of 3 GeV/c electrons in the T24 test beam at DESY. The performance of the chamber with specially designed low-noise, charge-sensitive preamplifiers is described. The parameters of the CsI-MWPC are compared to those of a TMAE photon detector in order to evaluate their potential as Ring Imaging Cherenkov (RICH) counters for the HERA-B experiment at DESY.

  3. Spectral radiance calibrations between 165-300 nm - An interlaboratory comparison

    NASA Technical Reports Server (NTRS)

    Bridges, J. M.; Ott, W. R.; Pitz, E.; Schulz, A.; Einfeld, D.; Stuck, D.

    1977-01-01

    The spectral radiance of deuterium lamps calibrated by the Max-Planck-Institut fuer Astronomie (MPI), by the U.S. National Bureau of Standards (NBS), and by the Physikalisch-Technische Bundesanstalt (PTB) are compared to check the agreement of UV radiometric scales. The NBS group used the optically thin continuum radiation from a wall-stabilized hydrogen arc as its fundamental radiometric standard, while the MPI and PTB groups used the synchrotron radiation facility in DESY. It is found that the spectral radiance scales based upon the DESY synchrotron and the NBS hydrogen arc are consistent, at least for one wavelength relative to another.

  4. Gas Electron Multiplier Tracking Telescopes for OLYMPUS

    NASA Astrophysics Data System (ADS)

    McMahon, Joshua; Campbell, Miles

    2011-10-01

    The OLYMPUS collaboration is conducting an experiment to measure two-photon contributions to elastic electron scattering. The experiment is taking place at the DORIS storage ring at DESY, Hamburg, Germany using the upgraded BLAST detector from the MIT-Bates Linear Accelerator Center. Gas Electron Multiplier (GEM) telescopes are used to detect scattered leptons at a forward angle to monitor the luminosity. The GEM detectors have been commissioned at the test facility at DESY and were installed along with the main detector in the DORIS storage ring. With the testbeam the performance characteristics such as gain, efficiency, multiplicity, and resolution of the GEMs were studied.

  5. Testing an e2v CCD230-42 sensor for dark current performance at ambient temperatures - Final Paper

    SciTech Connect

    Dungee, Ryan

    2015-08-20

    The design of the Guidance Focus and Alignment (GFA) system for the Dark Energy Spectroscopic Instrument (DESI) project calls for a set of charge-coupled devices (CCDs) which operate at ambient temperature. Here we assess the performance of these CCDs under such conditions. Data was collected from –21°C to 28°C and used to determine the effect of temperature on the effectiveness of dark current subtraction. Comparing the dark current uncertainty to our expected signal has shown that the DESI design specifications will be met without need for significant changes.

  6. Production and test results of SC 3.9-GHz accelerating cavity at Fermilab

    SciTech Connect

    Khabiboulline, Timergali; Cooper, Charlie; Edwards, Helen; Foley, Mike; Gonin, Ivan; Mitchell, Donald; Olis, D.; Rowe, Allan; Salman, Tariq; Solyak, Nikolay; /Fermilab

    2006-08-01

    The 3rd harmonic 3.9GHz accelerating cavity was proposed to improve beam performances for TTF-FEL facility. In the frame of collaboration Fermilab will provide DESY with a cryomodule containing a string of four cavities. In addition, a second cryomodule with one cavity will be fabricated for installation in the Fermilab photo-injector, which will be upgraded for the ILC accelerator test facility. In this paper we discuss the status of the cavity and coupler production and the first result of cavity tests. It is hoped that this project will be completed during the first half of 2007 and the cryomodule delivered to DESY in this time span.

  7. Project summary

    SciTech Connect

    Dungee, Ryan

    2015-08-22

    Telescope surveys have given us a great deal of information about our universe, but the images they capture carry with them an inherent limitation. The question then is how do we take this information to the next level? The answer: the Dark Energy Spectroscopic Instrument (DESI). DESI is an instrument that will measure the distance to tens of millions of galaxies in our night sky. This information can be combined with already existing images to construct a three dimensional map of our universe providing a great deal of new opportunities for cosmological research.

  8. Importance and benefits of the doctoral thesis for medical graduates.

    PubMed

    Giesler, Marianne; Boeker, Martin; Fabry, Götz; Biller, Silke

    2016-01-01

    Einleitung: Die Mehrheit der medizinischen AbsolventInnen in Deutschland promoviert, obwohl der Titel nicht zur ärztlichen Berufsausübung notwendig ist. Zur Frage, welchen individuellen Nutzen die Doktorarbeit aus Sicht der Promovenden hat, ist bislang nur wenig bekannt. Sie ist daher Gegenstand dieser Untersuchung.Methode: Analysiert wurden Daten aus Absolventenstudien der Abschlussjahrgänge 2007/2008 (N=514) und 2010/2011 (N=598) der Medizinischen Fakultäten Baden-Württembergs.Ergebnisse: 53% der Befragten haben 1,5 Jahre nach Studienabschluss ihre Promotion abgeschlossen. Die stärkste Zustimmung zu Beweggründen, eine Doktorarbeit anzufertigen, erfahren die Motive „Promotion ist üblich“ (85%) und „Verbesserung der Berufschancen“ (75%). Dem Motiv, eine akademische Karriere anzustreben, stimmten 36% zu. Weniger als 10% der Befragten setzen ihre Promotionsarbeit als Strategie bei der Stellensuche ein. Der Anteil der AbsolventInnen, die in der Krankenversorgung arbeiten ist unter den Promovierten praktisch genauso groß wie unter den Nicht-Promovierten. Diejenigen, die für die Promotion stärker wissenschaftliche Motive angeben, sind auch aktuell stärker an einer akademischen Karriere interessiert und sehen für sich mehr Möglichkeiten wissenschaftlich zu arbeiten. Als impliziter Nutzen zeigte sich, dass die promovierten AbsolventInnen ihre wissenschaftlichen Kompetenzen signifikant höher einschätzen, als ihre nicht promovierten KollegInnen.Diskussion: Obwohl die meisten MedizinerInnen eine Promotion nicht in erster Linie aus originärem Forschungsinteresse anstreben, erweitern sie dadurch dennoch ihre wissenschaftlichen Kompetenzen. Einen offensichtlicheren Nutzen hat die Promotion für diejenigen, die eine wissenschaftliche Karriere anstreben.

  9. Bibliographic Resources for the Historian of Astronomy

    NASA Astrophysics Data System (ADS)

    Corbin, B. G.

    1999-12-01

    Many large library collections now have online bibliographic catalogs on the web. These provide many hidden resources for the historian of astronomy. Special searching techniques will allow the historian to scan bibliographic records of hundreds of entries relating to biographies of astronomers, collected works of astronomers, ancient and medieval astronomy and many other historical subjects. Abstract databases such as the Astrophysics Data System and ARIBIB are also adding much historical bibliographic information. ARIBIB will eventually contain scanned images of the Astronomischer Jahresbericht containing bibliographic entries for all literature of astronomy from 1899 to 1968 and Astronomy and Astrophysics Abstracts from 1969 to present. Commercial services such as UnCover and FirstSearch provide a means of reaching bibliographic entries for journal and book literature in the history of astronomy which were not easily located in the past. A broad overview of these collections and services will be given, and searching techniques for finding ``hidden" bibliographic data will be presented. Web page addresses will be given for all sources covered.

  10. Mapping the biological condition of USA rivers and streams

    EPA Science Inventory

    We predicted the probable (pr) biological condition (BC) of ~5.4 million km of stream within the conterminous USA (CONUS). National maps of prBC could provide an important tool for prioritizing monitoring and restoration of streams. The USEPA uses a spatially balanced survey desi...

  11. System-Events Toolbox--Activating Urban Places for Social Cohesion through Designing a System of Events That Relies on Local Resources

    ERIC Educational Resources Information Center

    Fassi, Davide; Motter, Roberta

    2014-01-01

    This paper is a reflection on the use of public spaces in towns and the development of a system-events toolbox to activate them towards social cohesion. It is the result of a 1 year action research developed together with POLIMI DESIS Lab of the Department of Design to develop design solutions to open up the public spaces of the campus to the…

  12. Workforce Issues of the 21st Century: The People CMM to the Rescue

    DTIC Science & Technology

    2008-07-01

    Competency 27SEI Webinar August 2008 Buttles and Wemyss Software Engineer IV Application domain Procedural design Cobol & assembler Numerical analysis...Procedu al design Cobol & assembler Numerical analysis Knowledge: Requir ments nalysis System desi n Project management debugging Skills: Integrated...Procedural design Cobol & assembler Numerical analysis Knowledge: Requirements analysis System desig Project m nagement debug ing Skills: Integrated team

  13. Design, fabrication and test of a microfluidic nebulizer chip for desorption electrospray ionization mass spectrometry

    PubMed Central

    Sen, A K; Darabi, J; Knapp, D R

    2009-01-01

    This paper presents design, microfabrication, and test of a microfluidic nebulizer chip for desorption electrospray ionization mass spectrometry (DESI-MS) in proteomic analysis. The microfluidic chip is fabricated using cyclic olefin copolymer (COC) substrates. The fluidic channels are thermally embossed onto a base substrate using a nickel master and then a top substrate is thermally bonded to seal the channels. Carbon ink embossed into the top COC substrate is used to established electrical connection between the external power supply and the liquid in the channel. The microfluidic chip to external capillary connection is fabricated using Nanoport™ interconnection system. Preliminary leakage test was performed to demonstrate the interconnection system is leak-free and pressure test was performed to evaluate the burst pressure. Finally, the nebulizer chip was used to perform DESI-MS for analyzing peptides (BSA and bradykinin) and reserpine on the nanoporous alumina surface. DESI-MS performance of the microfluidic nebulizer chip is compared with that obtained using a conventional DESI nebulizer. PMID:20161284

  14. Responses of late-lactation cows to forage substitutes in low-forage diets supplemented with by-products

    Technology Transfer Automated Retrieval System (TEKTRAN)

    In response to drought-induced shortages of forage and increased corn and soy prices, a study was conducted to evaluate lactation response of dairy cows to lower-forage diets supplemented with forage substitutes and with byproduct feeds entirely substituted for corn grain and soybean feeds. The desi...

  15. On the identity of European Baridini (Coleoptera, Curculionoidea) named before 1832

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Twenty-eight names of European weevils usually regarded as Baridini in the literature are checked. Neotypes are designated for Curculio coerulescens Scopoli 1763 (emend.), C. glaber Herbst 1784, C. chalybeus Gmelin 1790, C. laticollis Marsham 1802, and C. picicornis Marsham 1802. Lectotypes are desi...

  16. An Introduction to ToxCast™

    EPA Science Inventory

    ToxCast™ is a chemical prioritization research program to develop the ability to forecast toxicity using bioactivity profiling. The point is to use results in a variety of in vitro and rapid non-mammalian in vivo assays to explore effects at different toxicity targets. The desi...

  17. Transient decrements in mood during energy deficit are independent of dietary protein-to-carbohydrate ratio

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Energy deficit and dietary macronutrient intake are thought to independently modulate cognition, mood and sleep. To what extent manipulating the dietary ratio of protein-to-carbohydrate affects mood, cognition and sleep during short-term energy deficit is undetermined. Using a randomized, block desi...

  18. On-probe atmospheric pressure thermal desorption-ESI-MS for the analysis of volatile analytes or volatile pryolysis products

    Technology Transfer Automated Retrieval System (TEKTRAN)

    An on-probe pyrolyzer has been constructed and interfaced with desorption electrospray ionization (DESI) mass spectrometry (MS) for the rapid analysis of non-volatile pyrolysis products. The detection and analysis of non-volatile pyrolysis products of peptides, proteins and the synthetic polymer pol...

  19. Effects of bale feeder type and supplementation of monensin on hay waste, intake, and performance of beef cattle

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The effects of feeder type and supplemental monensin on hay utilization in beef cows was investigated using 56 crossbred beef cows (BW= 494 ± 50 kg; BCS= 5.2 ± 0.5) in a split-plot treatment arrangement with a completely randomized design. Supplement treatment served as the main plot and feeder desi...

  20. DESIGN CONSIDERATIONS FOR THE MECHANICAL TUNER OF THE RHIC ELECTRON COOLER RF CAVITY.

    SciTech Connect

    RANK, J.; BEN-ZVI,I.; HAHN,G.; MCINTYRE,G.; DALY,E.; PREBLE,J.

    2005-05-16

    The ECX Project, Brookhaven Lab's predecessor to the RHIC e-Cooler, includes a prototype RF tuner mechanism capable of both coarse and fast tuning. This tuner concept, adapted originally from a DESY design, has longer stroke and significantly higher loads attributable to the very stiff ECX cavity shape. Structural design, kinematics, controls, thermal and RF issues are discussed and certain improvements are proposed.

  1. R and M (Reliability and Maintainability) Quality Team Concept and C-17 Design at Douglas Aircraft Company: An R and M 2000 Initiative Case Study

    DTIC Science & Technology

    1988-09-01

    Force, or the Department of Defense. AFIT/GrM/tSM/88S-56 WM QJALITY TEAM COCEPT AND C-17 DESI(G AT DOUGLAS AIRAFT COMPANY: Presented to the Faculty...and engineering design teams promoted dialogue on system engineering issues and encouraged an integrated approach to C-17 design. However, these

  2. Designing Computer Software To Minimize the Need for Employee Training.

    ERIC Educational Resources Information Center

    Winiecki, Donald J.

    2000-01-01

    Discusses problems that arise when computer software users have to learn a new system while maintaining productivity. Highlights include active learning; a constructivist view; Vygotsky's zone of proximal development; and a model called Design for Learnability (DesiL) that focuses the performance technologist on an ethnomethodological study of…

  3. 15 CFR 711.8 - How to request authorization from BIS to make electronic submissions of declarations or reports.

    Code of Federal Regulations, 2014 CFR

    2014-01-01

    ... Trade Regulations Relating to Commerce and Foreign Trade (Continued) BUREAU OF INDUSTRY AND SECURITY... submissions must be made through the Web-Data Entry System for Industry (Web-DESI), which can be accessed on the CWC web site at www.cwc.gov. (b) Authorization. If you or your company has a facility, plant...

  4. 15 CFR 711.8 - How to request authorization from BIS to make electronic submissions of declarations or reports.

    Code of Federal Regulations, 2013 CFR

    2013-01-01

    ... passwords for facilities, plant sites and trading companies (USC password) and Web-DESI user accounts (user name and password). (i) Each person, facility, plant site or trading company authorized to submit declarations and reports electronically will be assigned a password (USC password) that must be used...

  5. 15 CFR 711.8 - How to request authorization from BIS to make electronic submissions of declarations or reports.

    Code of Federal Regulations, 2012 CFR

    2012-01-01

    ... passwords for facilities, plant sites and trading companies (USC password) and Web-DESI user accounts (user name and password). (i) Each person, facility, plant site or trading company authorized to submit declarations and reports electronically will be assigned a password (USC password) that must be used...

  6. 15 CFR 711.8 - How to request authorization from BIS to make electronic submissions of declarations or reports.

    Code of Federal Regulations, 2011 CFR

    2011-01-01

    ... passwords for facilities, plant sites and trading companies (USC password) and Web-DESI user accounts (user name and password). (i) Each person, facility, plant site or trading company authorized to submit declarations and reports electronically will be assigned a password (USC password) that must be used...

  7. Review of studies on conventional linear colliders in the S- and X-Band regime

    SciTech Connect

    Loew, G.A.

    1992-07-01

    This paper gives a status report on the conventional approaches to linear colliders at DESY, KEK, SLAC and INP-Protvino in the S- and X-Band regime. Critical topics are reviewed and a discussion of global issues such as future R&D requirements is included.

  8. Review of studies on conventional linear colliders in the S- and X-Band regime

    SciTech Connect

    Loew, G.A.

    1992-07-01

    This paper gives a status report on the conventional approaches to linear colliders at DESY, KEK, SLAC and INP-Protvino in the S- and X-Band regime. Critical topics are reviewed and a discussion of global issues such as future R D requirements is included.

  9. Report on first TESLA window assembly test

    SciTech Connect

    Sun, D.; Koepke, K.

    1993-10-01

    RF input couplers for the superconducting cavities of the TESLA are under development at DESY and Fermilab. The coaxial part of the Fermilab input coupler has been tested up to 1.7 MW at Fermilab using 805 MHz rf power source. The test results, procedure and test setup are described.

  10. Transnational Organized Crime, Terrorism, and Criminalized States in Latin America: An Emerging Tier-One National Security Priority

    DTIC Science & Technology

    2012-08-01

    the government of Suriname (formerly Dutch Guiana) in the 1980s and early 1990s under Desi Bouterse, a convicted drug trafficker with strong ties to...murder charges in his own country, nonetheless was reelected to the presidency of Suriname in 2010. In addition to aiding and abetting drug

  11. AN INDICATOR OF POTENTIAL STREAM WOOD CONTRIBUTION FOR RIPARIAN FORESTS

    EPA Science Inventory

    In northwestern Oregon a key function of riparian forests is to provide wood to the stream network. This function is a prominent feature of Federal and State forest practices in the region. Thus, defining indicators which are associated with this function are important for desi...

  12. INDOOR AIR QUALITY AND INHALATION EXPOSURE - SIMULATION TOOL KIT

    EPA Science Inventory

    A Microsoft Windows-based indoor air quality (IAQ) simulation software package is presented. Named Simulation Tool Kit for Indoor Air Quality and Inhalation Exposure, or IAQX for short, this package complements and supplements existing IAQ simulation programs and is desi...

  13. Stream and River Condition Across the BLM's National System of Public Lands.

    EPA Science Inventory

    The Bureau of Land Management (BLM), in collaboration with the U.S. Environmental Protection Agency, conducted the first ever Western Rivers and Streams Assessment (WRSA), a survey of the condition of BLM streams and rivers throughout the contiguous western U.S. The WRSA was desi...

  14. Effects of Early Serotonin Programming on Fear Response, Memory and Aggression

    Technology Transfer Automated Retrieval System (TEKTRAN)

    The neurotransmitter serotonin (5-HT) also acts as a neurogenic compound in the developing brain. Early administration of a 5-HT agonist could alter development of serotonergic circuitry, altering behaviors mediated by 5-HT signaling, including memory, fear and aggression. The present study was desi...

  15. Genetic variation of a global germplasm collection of chickpea (Cicer arietinum L.) including Italian accessions at risk of genetic erosion.

    PubMed

    De Giovanni, C; Pavan, S; Taranto, F; Di Rienzo, V; Miazzi, M M; Marcotrigiano, A R; Mangini, G; Montemurro, C; Ricciardi, L; Lotti, C

    2017-01-01

    Chickpea (Cicer arietinum L.) is one of the most important legumes worldwide. We addressed this study to the genetic characterization of a germplasm collection from main chickpea growing countries. Several Italian traditional landraces at risk of genetic erosion were included in the analysis. Twenty-two simple sequence repeat (SSR) markers, widely used to explore genetic variation in plants, were selected and yielded 218 different alleles. Structure analysis and hierarchical clustering indicated that a model with three distinct subpopulations best fits the data. The composition of two subpopulations, named K1 and K2, broadly reflects the commercial classification of chickpea in the two types desi and kabuli, respectively. The third subpopulation (K3) is composed by both desi and kabuli genotypes. Italian accessions group both in K2 and K3. Interestingly, this study highlights genetic distance between desi genotypes cultivated in Asia and Ethiopia, which respectively represent the chickpea primary and the secondary centres of diversity. Moreover, European desi are closer to the Ethiopian gene pool. Overall, this study will be of importance for chickpea conservation genetics and breeding, which is limited by the poor characterization of germplasm collection.

  16. Direct analysis of ethylenediaminetetraacetic acid (EDTA) on concrete by reactive-desorption electrospray ionization mass spectrometry.

    PubMed

    Lebeau, D; Reiller, P E; Lamouroux, C

    2015-01-01

    Analysis of organic ligands such as ethylenediaminetetraacetic acid (EDTA) is today an important challenge due to their ability to increase the mobility of radionuclides and metals. Reactive desorption electrospray ionization mass spectrometry (reactive-DESI-MS) was used for direct analysis of EDTA on concrete samples. EDTA forms complexes and those with Fe(III) ions are among the most thermodynamically favored. This complexing capacity was used to improve the specific detection of EDTA directly on a concrete matrix by doping the solvent spray of DESI with a solution of FeCl3 to selectively create the complex between EDTA and Fe(III). Thus, EDTA sensitivity was largely improved by two orders of magnitude with reactive-DESI-MS experiments thanks to the specific detection of EDTA as a [EDTA-4H+Fe(III)](-) complex. The proof of principle that reactive DESI can be applied to concrete samples to detect EDTA has been demonstrated. Its capacity for semi-quantitative determination and localization of EDTA under ambient conditions and with very little sample preparation, minimizing sample manipulations and solvent volumes, two important conditions for the development of new methodologies in the field of analytical chemistry, has been shown.

  17. FormCalc 9 and Extensions

    NASA Astrophysics Data System (ADS)

    Hahn, T.; Paβehr, S.; Schappacher, C.

    2016-10-01

    We present Version 9 of the Feynman-diagram calculator FormCalc and a flexible new suite of shell scripts and Mathematica packages based on FormCalc, which can be adapted and used as a template for calculations. Report DESY 2016-060, MPP-2016-63

  18. DEVELOPMENTAL TOXICITY OF ATRAZINE METABOLITES IN FISCHER 344 RATS

    EPA Science Inventory

    Previously we have shown that atrazine, a commonly used herbicide, causes full-litter resorption (FLR) in Fischer 344 rats at 50 mg/kg. In this study, we tested four atrazine metabolites for their potential to cause FLR and developmental toxicity. Desethylatrazine (DEA), desis...

  19. East Indian Families Raising ABCD Adolescents: Cultural and Generational Challenges

    ERIC Educational Resources Information Center

    Poulsen, Shruti S.

    2009-01-01

    Immigration is a process fraught with both challenges and opportunities for families. In particular, East Indian families with U.S.-born adolescents experience the challenges of bridging cultures across generational divides; they are perceived by others as confused, identity less, and conflicted or as American-Born, Confused Desis (ABCDs). This…

  20. PHYTOREMEDIATION OF DREDGED SEDIMENTS: A CASE STUDY AT THE JONES ISLAND CDF

    EPA Science Inventory

    The Jones Island Confined Disposal Facility (CDF) is a 44 acre in-lake area that receives dredged material from Milwaukee Harbor and the surrounding waterways. Some of those materials are contaminated with industrial waste and urban run-off. The CDF is nearing the end of its desi...

  1. Simple sequence repeat markers that identify Claviceps species and strains

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Claviceps purpurea is a pathogen that infects most members of the Pooideae subfamily and causes ergot, a floral disease in which the ovary is replaced with a sclerotium. This study was initiated to develop Simple Sequence Repeat (SSRs) markers for rapid identification of C. purpurea. SSRs were desi...

  2. CHILDREN'S ENVIRONMENTAL HEALTH RESEARCH - EPA AND DHHS COLLABORATE TO ADDRESS LONG-TERM HEALTH ISSUES

    EPA Science Inventory

    Children's environmental health is important to the mission of both the U.S. Department of Health and Human Services (DHHS) and the U.S. Environmental Protection Agency (EPA). Over the past seven years, federal experts from a variety of disciplines including survey sampling desi...

  3. Adaptive Machine Vision

    DTIC Science & Technology

    1989-01-25

    circuit may be greatly reduced by clever use of symmetry as discussed by Y. P. Tsividis in DesiQn of MOS VLSI Circuits for Telecommunications, Chapter 11...34Continuous-Time Filters," Section 2, "Processor Continuous-Time Filters," (edited by Y. P. Tsividis and P. Antognetti, Prentice-Hall, Inc

  4. NATIONAL LAKE ASSESSMENT MONITORING DESIGN

    EPA Science Inventory

    The USEPA designed the National Lake Assessment in 2005-6 with field sampling being completed in 2007. The objective of the assessment is to estimate the ecological condition of lakes and reservoirs nationally. The objective of this paper is to describe the national survey desi...

  5. A New Splitting Method for Both Analytical and Preparative LC/MS

    NASA Astrophysics Data System (ADS)

    Cai, Yi; Adams, Daniel; Chen, Hao

    2013-11-01

    This paper presents a novel splitting method for liquid chromatography/mass spectrometry (LC/MS) application, which allows fast MS detection of LC-separated analytes and subsequent online analyte collection. In this approach, a PEEK capillary tube with a micro-orifice drilled on the tube side wall is used to connect with LC column. A small portion of LC eluent emerging from the orifice can be directly ionized by desorption electrospray ionization (DESI) with negligible time delay (6~10 ms) while the remaining analytes exiting the tube outlet can be collected. The DESI-MS analysis of eluted compounds shows narrow peaks and high sensitivity because of the extremely small dead volume of the orifice used for LC eluent splitting (as low as 4 nL) and the freedom to choose favorable DESI spray solvent. In addition, online derivatization using reactive DESI is possible for supercharging proteins and for enhancing their signals without introducing extra dead volume. Unlike UV detector used in traditional preparative LC experiments, this method is applicable to compounds without chromophores (e.g., saccharides) due to the use of MS detector. Furthermore, this splitting method well suits monolithic column-based ultra-fast LC separation at a high elution flow rate of 4 mL/min. [Figure not available: see fulltext.

  6. Garbanzo diet lowers cholesterol in hamsters

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Cholesterol-lowering potential of diets with 22% protein from Chickpea (Cicer arietinum, European variety of Garbanzo, Kabuli Chana), Bengal gram (Cicer arietinum, Asian variety of Garbanzo, Desi Chana, smaller in size, yellow to black color), lentils, soy protein isolate, hydrolyzed salmon protein...

  7. Current and Emerging Water Distribution Main Renewal Technologies

    EPA Science Inventory

    The funding needed to address aging underground infrastructure renewals range as high as $325 billion over the next 20 years and with the current annual replacement rate at 0.5%, pipes are being expected to last for 200 years, which is unreasonable considering most pipes are desi...

  8. A new splitting method for both analytical and preparative LC/MS.

    PubMed

    Cai, Yi; Adams, Daniel; Chen, Hao

    2014-02-01

    This paper presents a novel splitting method for liquid chromatography/mass spectrometry (LC/MS) application, which allows fast MS detection of LC-separated analytes and subsequent online analyte collection. In this approach, a PEEK capillary tube with a micro-orifice drilled on the tube side wall is used to connect with LC column. A small portion of LC eluent emerging from the orifice can be directly ionized by desorption electrospray ionization (DESI) with negligible time delay (6~10 ms) while the remaining analytes exiting the tube outlet can be collected. The DESI-MS analysis of eluted compounds shows narrow peaks and high sensitivity because of the extremely small dead volume of the orifice used for LC eluent splitting (as low as 4 nL) and the freedom to choose favorable DESI spray solvent. In addition, online derivatization using reactive DESI is possible for supercharging proteins and for enhancing their signals without introducing extra dead volume. Unlike UV detector used in traditional preparative LC experiments, this method is applicable to compounds without chromophores (e.g., saccharides) due to the use of MS detector. Furthermore, this splitting method well suits monolithic column-based ultra-fast LC separation at a high elution flow rate of 4 mL/min. Figure ᅟ

  9. Spatially resolved metabolic phenotyping of breast cancer by desorption electrospray ionization mass spectrometry.

    PubMed

    Guenther, Sabine; Muirhead, Laura J; Speller, Abigail V M; Golf, Ottmar; Strittmatter, Nicole; Ramakrishnan, Rathi; Goldin, Robert D; Jones, Emrys; Veselkov, Kirill; Nicholson, Jeremy; Darzi, Ara; Takats, Zoltan

    2015-05-01

    Breast cancer is a heterogeneous disease characterized by varying responses to therapeutic agents and significant differences in long-term survival. Thus, there remains an unmet need for early diagnostic and prognostic tools and improved histologic characterization for more accurate disease stratification and personalized therapeutic intervention. This study evaluated a comprehensive metabolic phenotyping method in breast cancer tissue that uses desorption electrospray ionization mass spectrometry imaging (DESI MSI), both as a novel diagnostic tool and as a method to further characterize metabolic changes in breast cancer tissue and the tumor microenvironment. In this prospective single-center study, 126 intraoperative tissue biopsies from tumor and tumor bed from 50 patients undergoing surgical resections were subject to DESI MSI. Global DESI MSI models were able to distinguish adipose, stromal, and glandular tissue based on their metabolomic fingerprint. Tumor tissue and tumor-associated stroma showed evident changes in their fatty acid and phospholipid composition compared with normal glandular and stromal tissue. Diagnosis of breast cancer was achieved with an accuracy of 98.2% based on DESI MSI data (PPV 0.96, NVP 1, specificity 0.96, sensitivity 1). In the tumor group, correlation between metabolomic profile and tumor grade/hormone receptor status was found. Overall classification accuracy was 87.7% (PPV 0.92, NPV 0.9, specificity 0.9, sensitivity 0.92). These results demonstrate that DESI MSI may be a valuable tool in the improved diagnosis of breast cancer in the future. The identified tumor-associated metabolic changes support theories of de novo lipogenesis in tumor tissue and the role of stroma tissue in tumor growth and development and overall disease prognosis.

  10. Direct analysis of Salvia divinorum leaves for salvinorin A by thin layer chromatography and desorption electrospray ionization multi-stage tandem mass spectrometry.

    PubMed

    Kennedy, Joseph H; Wiseman, Justin M

    2010-05-15

    Salvia divinorum is widely cultivated in the US, Mexico, Central and South America and Europe and is consumed for its ability to produce hallucinogenic effects similar to those of other scheduled hallucinogenic drugs, such as LSD. Salvinorin A (SA), a kappa opiod receptor agonist and psychoactive constituent, is found primarily in the leaves and to a lesser extent in the stems of the plant. Herein, the analysis of intact S. divinorum leaves for SA and of acetone extracts separated using thin layer chromatography (TLC) is demonstrated using desorption electrospray ionization (DESI) mass spectrometry. The detection of SA using DESI in the positive ion mode is characterized by several ions associated with the compound - [M+H](+), [M+NH(4)](+), [M+Na](+), [2M+NH(4)](+), and [2M+Na](+). Confirmation of the identity of these ions is provided through exact mass measurements using a time-of-flight (ToF) mass spectrometer. The presence of SA in the leaves was confirmed by multi-stage tandem mass spectrometry (MS(n)) of the [M+H](+) ion using a linear ion trap mass spectrometer. Direct analysis of the leaves revealed several species of salvinorin in addition to SA as confirmed by MS(n), including salvinorin B, C, D/E, and divinatorin B. Further, the results from DESI imaging of a TLC separation of a commercial leaf extract and an acetone extract of S. divinorum leaves were in concordance with the TLC/DESI-MS results of an authentic salvinorin A standard. The present study provides an example of both the direct analysis of intact plant materials for screening illicit substances and the coupling of TLC and DESI-MS as a simple method for the examination of natural products.

  11. Characterization of Ce SUP 3+-tributyl phosphate coordination complexes produced by fused droplet electrospray ionization with a target capillary

    SciTech Connect

    Gary S. Groenewold; Jean-Jacques Gaumet

    2011-12-01

    Coordination complexes containing Ce(III) and tri-n-butyl phosphate (TBP) in the 1+, 2+ and 3+ charge states were generated using desorption electrospray ionization (DESI) mass spectrometry, in which the analyte solutions were supplied via a target capillary orthogonally situated with respect to the electrospray. Comparison with direct electrospray (ESI) showed that the same coordination complexes were produced in each experiment, and could be described by the general formula [Ce(NO3)m=0-2(TBP)n](3-m)+. This result indicates that DESI has utility for measuring metal speciation for metal ligand solutions where the gas-phase complexes generated by ESI have been correlated with solution speciation. Such an application would be useful for analyses where it is desirable to limit the total amount of metal being handled, or that have solvent systems that are not readily amenable to ESI. Both the direct ESI and DESI mass spectra showed similar trends with respect to the TBP:Ce ratio, viz. high values tend to favor formation of a larger fraction of the 1+ species, and the 2+ and 3+ species become relatively more important as the ratio is decreased. Within individual charge state ion envelopes, lower TBP:Ce ratios produce coordination complexes with fewer ligands, a trend also seen using both approaches. These trends again point toward strong similarity between the direct ESI and DESI analyses of the metal-ligand solutions. The DESI experiments were less sensitive for measuring the coordination complexes compared to the direct ESI experiments, by a factor of 10 - 100 depending on whether minimum detectable concentration or absolute ion abundances were considered. Nevertheless, mid-picomolar quantities of coordination complexes were measured using the target capillary, indicating that sensitivity would be sufficient for measuring species in many industrial separations processes.

  12. Desorption electrospray ionization mass spectrometry: Imaging drugs and metabolites in tissues

    PubMed Central

    Wiseman, Justin M.; Ifa, Demian R.; Zhu, Yongxin; Kissinger, Candice B.; Manicke, Nicholas E.; Kissinger, Peter T.; Cooks, R. Graham

    2008-01-01

    Ambient ionization methods for MS enable direct, high-throughput measurements of samples in the open air. Here, we report on one such method, desorption electrospray ionization (DESI), which is coupled to a linear ion trap mass spectrometer and used to record the spatial intensity distribution of a drug directly from histological sections of brain, lung, kidney, and testis without prior chemical treatment. DESI imaging provided identification and distribution of clozapine after an oral dose of 50 mg/kg by: i) measuring the abundance of the intact ion at m/z 327.1, and ii) monitoring the dissociation of the protonated drug compound at m/z 327.1 to its dominant product ion at m/z 270.1. In lung tissues, DESI imaging was performed in the full-scan mode over an m/z range of 200-1100, providing an opportunity for relative quantitation by using an endogenous lipid to normalize the signal response of clozapine. The presence of clozapine was detected in all tissue types, whereas the presence of the N-desmethyl metabolite was detected only in the lung sections. Quantitation of clozapine from the brain, lung, kidney, and testis, by using LC-MS/MS, revealed concentrations ranging from 0.05 μg/g (brain) to a high of 10.6 μg/g (lung). Comparisons of the results recorded by DESI with those by LC-MS/MS show good agreement and are favorable for the use of DESI imaging in drug and metabolite detection directly from biological tissues. PMID:18697929

  13. Online Monitoring of Enzymatic Reactions Using Time-Resolved Desorption Electrospray Ionization Mass Spectrometry.

    PubMed

    Cheng, Si; Wu, Qiuhua; Xiao, He; Chen, Hao

    2017-02-21

    Electrospray ionization mass spectrometry (ESI-MS) is powerful for determining enzymatic reaction kinetics because of its soft ionization nature. However, it is limited to use ESI-favored solvents containing volatile buffers (e.g., ammonium acetate). In addition, lack of a quenching step for online ESI-MS reaction monitoring might introduce inaccuracy, due to the possible acceleration of reaction in the sprayed microdroplets. To overcome these issues, this study presents a new approach for online measuring enzymatic reaction kinetics using desorption electrospray ionization mass spectrometry (DESI-MS). By using DESI-MS, enzymatic reaction products in a buffered aqueous media (e.g., a solution containing Tris buffer or high concentration of inorganic salts) could be directly detected. Furthermore, by adjusting the pH and solvent composition of the DESI spray, reaction can be online quenched to avoid the postionization reaction event, leading to fast and accurate measurement of kinetic constants. Reaction time control can be obtained simply by adjusting the injection flow rates of enzyme and substrate solutions. Enzymatic reactions examined in this study include hydrolysis of 2-nitrophenyl-β-D-galactopyranoside by β-galactosidase and hydrolysis of acetylcholine by acetylcholinesterase. Derived Michaelis-Menten constants Km for these two reactions were determined to be 214 μM and 172 μM, respectively, which are in good agreement with the values of 300 μM and 230 μM reported in literature, validating the DESI-MS approach. Furthermore, this time-resolved DESI-MS also allowed us to determine Km and turnover number kcat for trypsin digestion of angiotensin II (Km and kcat are determined to be 6.4 mM and 1.3 s(-1), respectively).

  14. The quantitative surface analysis of an antioxidant additive in a lubricant oil matrix by desorption electrospray ionization mass spectrometry

    PubMed Central

    Da Costa, Caitlyn; Reynolds, James C; Whitmarsh, Samuel; Lynch, Tom; Creaser, Colin S

    2013-01-01

    RATIONALE Chemical additives are incorporated into commercial lubricant oils to modify the physical and chemical properties of the lubricant. The quantitative analysis of additives in oil-based lubricants deposited on a surface without extraction of the sample from the surface presents a challenge. The potential of desorption electrospray ionization mass spectrometry (DESI-MS) for the quantitative surface analysis of an oil additive in a complex oil lubricant matrix without sample extraction has been evaluated. METHODS The quantitative surface analysis of the antioxidant additive octyl (4-hydroxy-3,5-di-tert-butylphenyl)propionate in an oil lubricant matrix was carried out by DESI-MS in the presence of 2-(pentyloxy)ethyl 3-(3,5-di-tert-butyl-4-hydroxyphenyl)propionate as an internal standard. A quadrupole/time-of-flight mass spectrometer fitted with an in-house modified ion source enabling non-proximal DESI-MS was used for the analyses. RESULTS An eight-point calibration curve ranging from 1 to 80 µg/spot of octyl (4-hydroxy-3,5-di-tert-butylphenyl)propionate in an oil lubricant matrix and in the presence of the internal standard was used to determine the quantitative response of the DESI-MS method. The sensitivity and repeatability of the technique were assessed by conducting replicate analyses at each concentration. The limit of detection was determined to be 11 ng/mm2 additive on spot with relative standard deviations in the range 3–14%. CONCLUSIONS The application of DESI-MS to the direct, quantitative surface analysis of a commercial lubricant additive in a native oil lubricant matrix is demonstrated. © 2013 The Authors. Rapid Communications in Mass Spectrometry published by John Wiley & Sons, Ltd. PMID:24097398

  15. Integration of electrochemistry with ultra-performance liquid chromatography/mass spectrometry.

    PubMed

    Cai, Yi; Zheng, Qiuling; Liu, Yong; Helmy, Roy; Loo, Joseph A; Chen, Hao

    2015-01-01

    This study presents the development of ultra-performance liquid chromatography (UPLC) mass spectrometry (MS) combined with electrochemistry (EC) for the first time and its application for the structural analysis of proteins/peptides that contain disulfide bonds. In our approach, a protein/peptide mixture sample undergoes a fast UPLC separation and subsequent electrochemical reduction in an electrochemical flow cell followed by online MS and tandem mass spectrometry (MS/MS) analyses. The electrochemical cell is coupled to the mass spectrometer using our recently developed desorption electrospray ionization (DESI) interface. Using this UPLC/EC/DESI-MS method, peptides that contain disulfide bonds can be differentiated from those without disulfide bonds, as the former are electroactive and reducible. MS/MS analysis of the disulfide-reduced peptide ions provides increased information on the sequence and disulfide-linkage pattern. In a reactive DESI- MS detection experiment in which a supercharging reagent was used to dope the DESI spray solvent, increased charging was obtained for the UPLC-separated proteins. Strikingly, upon online electrolytic reduction, supercharged proteins (e.g., α-lactalbumin) showed even higher charging, which will be useful in top- down protein structure MS analysis as increased charges are known to promote protein ion dissociation. Also, the separation speed and sensitivity are enhanced by approximately 1(~)2 orders of magnitude by using UPLC for the liquid chromatography (LC)/EC/MS platform, in comparison to the previously used high- performance liquid chromatography (HPLC). This UPLC/EC/DESI-MS method combines the power of fast UPLC separation, fast electrochemical conversion, and online MS structural analysis for a potentially valuable tool for proteomics research and bioanalysis.

  16. Performance tests of an AGIPD 0.4 assembly at the beamline P10 of PETRA III

    NASA Astrophysics Data System (ADS)

    Becker, J.; Marras, A.; Klyuev, A.; Westermeier, F.; Trunk, U.; Graafsma, H.

    2013-06-01

    The Adaptive Gain Integrating Pixel Detector (AGIPD) is a novel detector system, currently under development by a collaboration of DESY, the Paul Scherrer Institute in Switzerland, the University of Hamburg and the University of Bonn, and is primarily designed for use at the European XFEL. To verify key features of this detector, an AGIPD 0.4 test chip assembly was tested at the P10 beamline of the PETRA III synchrotron at DESY. The test chip successfully imaged both the direct synchrotron beam and single 7.05 keV photons at the same time, demonstrating the large dynamic range required for XFEL experiments. X-ray scattering measurements from a test sample agree with standard measurements and show the chip's capability of observing dynamics at the microsecond time scale.

  17. Exploring dark matter microphysics with galaxy surveys

    SciTech Connect

    Escudero, Miguel; Mena, Olga; Vincent, Aaron C.; Wilkinson, Ryan J.; Boehm, Céline E-mail: omena@ific.uv.es E-mail: ryan.wilkinson@durham.ac.uk

    2015-09-01

    We use present cosmological observations and forecasts of future experiments to illustrate the power of large-scale structure (LSS) surveys in probing dark matter (DM) microphysics and unveiling potential deviations from the standard ΛCDM scenario. To quantify this statement, we focus on an extension of ΛCDM with DM-neutrino scattering, which leaves a distinctive imprint on the angular and matter power spectra. After finding that future CMB experiments (such as COrE+) will not significantly improve the constraints set by the Planck satellite, we show that the next generation of galaxy clustering surveys (such as DESI) could play a leading role in constraining alternative cosmologies and even have the potential to make a discovery. Typically we find that DESI would be an order of magnitude more sensitive to DM interactions than Planck, thus probing effects that until now have only been accessible via N-body simulations.

  18. Mechanical stability study of type IV cryomodule (ILC prototype)

    SciTech Connect

    McGee, M.W.; Doremus, R.; Wands, C.R.; /Fermilab

    2007-06-01

    An ANSYS modal and harmonic finite element analysis (FEA) was performed in order to investigate cryomodule design mechanical stability for the proposed International Linear Collider (ILC). The current cryomodule, designated Type IV or (T4CM), closely follows the Type III TESLA Test Facility (TTF) version used at DESY, with the exception of a proposed location of the superconducting (SC) quadrupole at the center. This analysis considered the stringent stability criteria established for the ILC, where vertical motion for the SC quadrupole is limited to the micron range at a few Hz. Model validation was achieved through Type III cryomodule vibration measurement studies performed at DESY. The effect of support location, support stiffness and other important parameters were considered in a parametric sensitivity study. FEA results, fast motion investigations and stabilization techniques are discussed.

  19. QUENCH STUDIES AND PREHEATING ANALYSIS OF SEAMLESS

    SciTech Connect

    Palczewski, Ari; Geng, Rongli; Eremeev, Grigory

    2013-09-01

    One of the alternative manufacturing technologies for SRF cavities is hydroforming from seamless tubes. Although this technology has produced cavities with gradient and Q-values comparable to standard EBW/EP cavities, a few questions remain. One of these questions is whether the quench mechanism in hydroformed cavities is the same as in standard electron beam welded cavities. Towards this effort Jefferson Lab performed quench studies on 2 9 cell seamless hydroformed cavities. These cavities include DESY's - Z163 and Z164 nine-cell cavities hydroformed at DESY. Initial Rf test results Z163 were published in SRF2011. In this report we will present post JLAB surface re-treatment quench studies for each cavity. The data will include OST and T-mapping quench localization as well as quench location preheating analysis comparing them to the observations in standard electron beam welded cavities.

  20. FPGA-based Klystron linearization implementations in scope of ILC

    SciTech Connect

    Omet, M.; Michizono, S.; Varghese, P.; Schlarb, H.; Branlard, J.; Cichalewski, W.

    2015-01-23

    We report the development and implementation of four FPGA-based predistortion-type klystron linearization algorithms. Klystron linearization is essential for the realization of ILC, since it is required to operate the klystrons 7% in power below their saturation. The work presented was performed in international collaborations at the Fermi National Accelerator Laboratory (FNAL), USA and the Deutsches Elektronen Synchrotron (DESY), Germany. With the newly developed algorithms, the generation of correction factors on the FPGA was improved compared to past algorithms, avoiding quantization and decreasing memory requirements. At FNAL, three algorithms were tested at the Advanced Superconducting Test Accelerator (ASTA), demonstrating a successful implementation for one algorithm and a proof of principle for two algorithms. Furthermore, the functionality of the algorithm implemented at DESY was demonstrated successfully in a simulation.

  1. 3.9 GHz superconducting accelerating 9-cell cavity vertical test results

    SciTech Connect

    Khabiboulline, Timergali; Cooper, Charles; Dhanaraj, Nandhini; Edwards, Helen; Foley, Mike; Harms, Elvin; Mitchell, Donald; Rowe, Allan; Solyak, Nikolay; Moeller, Wolf-Dietrich; /DESY

    2007-06-01

    The 3rd harmonic 3.9GHz accelerating cavity was proposed to improve the beam performance of the FLASH (TTF/DESY) facility [1]. In the frame of a collaborative agreement, Fermilab will provide DESY with a cryomodule containing a string of four cavities. In addition, a second cryomodule with one cavity will be fabricated for installation in the Fermilab photo-injector, which will be upgraded for the ILC accelerator test facility. The first 9-cell Nb cavities were tested in a vertical setup and they didn't reach the designed accelerating gradient [2]. The main problem was a multipactor in the HOM couplers, which lead to overheating and quenching of the HOM couplers. New HOM couplers with improved design are integrated in the next 9-cell cavities. In this paper we present all results of the vertical tests.

  2. Effects of gamma irradiation on the shoot length of Cicer seeds [rapid communication

    NASA Astrophysics Data System (ADS)

    Toker, Cengiz; Uzun, Bulent; Canci, Huseyin; Oncu Ceylan, F.

    2005-08-01

    The effects of radiation on the shoot and root lengths of germinated seedling of irradiated seeds of Cicer species, i.e. three kabuli types and four desi types of cultivated chickpea ( Cicer arietinum Ladiz.) and 2 annual wild types ( C. reticulatum Ladiz. and C. bijugum K.H. Rech.) were investigated. The seeds were irradiated with a 60Co gamma source using 0, 200, 300 and 400 Gy doses at 1.66 kGy h -1. At 200 Gy minor effects could be observed, but at 400 Gy an obvious depression of shoot length was observed. The kabuli types were more affected than the desi ones. The critical dose that prevented the shoot and root elongation varied among species and also ranged from genotypes to genotype within species.

  3. Ethylene glycol contamination effects on first surface aluminized mirrors

    NASA Astrophysics Data System (ADS)

    Dunlop, Patrick; Probst, Ronald G.; Evatt, Matthew; Reddell, Larry; Sprayberry, David

    2016-07-01

    The Dark Energy Spectroscopic Instrument (DESI) is under construction for installation on the Mayall 4 Meter telescope. The use of a liquid cooling system is proposed to maintain the DESI prime focus assembly temperature within ±1°C of ambient. Due to concerns of fluid deposition onto optical surfaces from possible leaks, systematic tests were performed of the effects on first surface aluminized mirrors of ethylene glycol and two other candidate coolants. Objective measurement of scattering and reflectivity was an important supplement to visual inspection. Rapid cleanup of a coolant spill followed by a hand wash of the mirror limited surface degradation to the equivalent of a few months of general environmental exposure. Prolonged exposure to corrosive coolants dissolved the aluminum, necesitating mirror recoating.

  4. FPGA-based Klystron linearization implementations in scope of ILC

    DOE PAGES

    Omet, M.; Michizono, S.; Matsumoto, T.; ...

    2015-01-23

    We report the development and implementation of four FPGA-based predistortion-type klystron linearization algorithms. Klystron linearization is essential for the realization of ILC, since it is required to operate the klystrons 7% in power below their saturation. The work presented was performed in international collaborations at the Fermi National Accelerator Laboratory (FNAL), USA and the Deutsches Elektronen Synchrotron (DESY), Germany. With the newly developed algorithms, the generation of correction factors on the FPGA was improved compared to past algorithms, avoiding quantization and decreasing memory requirements. At FNAL, three algorithms were tested at the Advanced Superconducting Test Accelerator (ASTA), demonstrating a successfulmore » implementation for one algorithm and a proof of principle for two algorithms. Furthermore, the functionality of the algorithm implemented at DESY was demonstrated successfully in a simulation.« less

  5. Higher Order Modes in Third Harmonic Cavities for XFEL/FLASH

    SciTech Connect

    Shinton, I.R.R.; Baboi, N.; Eddy, N.; Flisgen, T.; Glock, H.W.; Jones, R.M.; Juntong, N.; Khabiboulline, T.N.; van Rienen, U; Zhang, P.; /Manchester U. /DESY /Cockcroft Inst. Accel. Sci. Tech.

    2010-06-01

    We analyse higher order modes in the 3.9 GHz bunch shaping cavities recently installed in the FLASH facility at DESY. We report on recent experimental results on the frequency spectrum from probe based measurements made at CMTB at DESY. These are compared to those predicted by finite difference and finite element computer codes. This study is focused mainly on the dipole component of the multi-pole expansion of the wakefield. The modes are readily identifiable as single-cavity modes provided the frequencies of these modes are below the cut-off of the inter-connecting beam pipes. The modes above cut-off are coupled to the 4 cavities and are distinct from single cavity modes.

  6. An innovative method based on quick, easy, cheap, effective, rugged, and safe extraction coupled to desorption electrospray ionization-high resolution mass spectrometry for screening the presence of paralytic shellfish toxins in clams.

    PubMed

    Mattarozzi, Monica; Bianchi, Federica; Milioli, Marco; Cavazza, Antonella; Careri, Maria

    2016-01-15

    The capabilities of desorption electrospray ionization-high resolution mass spectrometry (DESI-HRMS) were tested for screening the presence of some paralytic shellfish toxins in clams. A quick, easy, cheap, effective, rugged, and safe (QuEChERS) approach is proposed for sample clean-up. QuEChERS extraction was optimized by using a full factorial design followed by the multicriteria method of the desirability functions. Quantitation limits in the microgram per kilogram range proved reliability of the method for the detection of the investigated toxins in accordance to the rules laid down by European legislation. The optimized QuEChERS-DESI-HRMS based-method allowed for a rapid reliable screening of the investigated compounds at levels of interest, thus being useful for high-throughput analyses.

  7. Enabling Multinational Communications with CENTRIXS

    DTIC Science & Technology

    2010-06-01

    JAN-FEB 1 CFAK MALABAR OCT 4 – CFAKs/ BGAN ANNUALEX NOV 2 CFAKs RIMPAC JUL 18 CFAKs Total Assets: CFAKs = 21+ CPOKs = 9 1 Portable Inmarsat 3 BGANs ...Indonesia Demo NOV, 1 CFAK, BGAN CARAT/SEACAT MAY – AUG 4 CFAKs//4 CPOKs DESI OCT 1 CPOK CSOFEX 08-4 OCT 2 CFAKs KITP OCT 1 CFAK 2005 – 8 installs 2008 – 55+ installs

  8. Desorption electro-flow focusing ionization of explosives and narcotics for ambient pressure mass spectrometry.

    PubMed

    Forbes, Thomas P; Brewer, Tim M; Gillen, Greg

    2013-10-07

    Desorption electro-flow focusing ionization (DEFFI), a desorption-based ambient ion source, was developed, characterized, and evaluated as a possible source for field deployable ambient pressure mass spectrometry (APMS). DEFFI, based on an electro-flow focusing system, provides a unique configuration for the generation of highly charged energetic droplets for sample analysis and ionization. A concentrically flowing carrier gas focuses the liquid emanating from a capillary through a small orifice, generating a steady fluid jet. An electric field is applied across this jet formation region, producing high velocity charged droplets that impinge on an analyte laden surface. This configuration separates the jet charging region from the external environment, eliminating detrimental effects from droplet space charge or target surface charging. The sample desorption and ionization processes operate similar to desorption electrospray ionization (DESI). DEFFI demonstrated strong signal intensities and improved signal-to-noise ratios in both positive and negative mode mass spectrometry for narcotics, i.e., cocaine, and explosives, i.e., cyclotrimethylenetrinitramine (RDX), respectively. A characterization of DEFFI ionization mechanisms identified operation regimes of both electrospray and corona discharge based analyte ionization, as well as limitations in overall signal. In addition, the DEFFI response was directly compared to DESI-MS under similar operating conditions. This comparison established a wider and more stable optimal operating range, while requiring an order of magnitude lower applied gas pressure and applied potential for DEFFI than DESI. These reductions are due to the physical mode of jet formation and geometric configuration differences between DEFFI and DESI, pointing to a potential benefit of DEFFI-MS for field implementation.

  9. Commissioning and early operating experience with the Fermilab horizontal test facility

    SciTech Connect

    Carcagno, R.; Chase, B.; Harms, E.; Hocker, A.; Prieto, P.; Reid, J.; Rowe, A.; Theilacker, J.; Votava, M.; /Fermilab

    2007-10-01

    Fermilab has constructed a facility for testing dressed superconducting radiofrequency (RF) cavities at 1.8 K with high-power pulsed RF. This test stand was designed to test both 9-cell 1.3 GHz TESLA-style cavities and 9-cell 3.9 GHz cavities being built by Fermilab for DESY's TTF-FLASH facility. An overview of the test stand and a description of its initial commissioning is described here.

  10. Test of a high resolution drift chamber prototype

    NASA Astrophysics Data System (ADS)

    Commichau, V.; Deutschmann, M.; Draheim, K. J.; Fritze, P.; Hangarter, K.; Hawelka, P.; Herten, U.; Linnhöfer, D.; Tonutti, M.; Biermann, U.; Roderburg, E.; Walenta, A. H.; Anderhub, H.; Fehlmann, J.; Hofer, H.; Klein, M.; Paradiso, J. A.; Schreiber, J.; Viertel, G.

    1985-04-01

    The performance of a drift chamber prototype for a colliding beam vertex detector in a test beam at DESY is described. At one (two) atmosphere gas pressure a spatial resolution of 40 μm (30 μm) per wire for one cm drift length was achieved with a 100 MHz Flash-ADC system. An excellent double track resolution of better than 300 μm over the full drift length of 5 cm can be estimated.

  11. U.C. Davis high energy particle physics research: Technical progress report -- 1990

    SciTech Connect

    1990-12-31

    Summaries of progress made for this period is given for each of the following areas: (1) Task A--Experiment, H1 detector at DESY; (2) Task C--Experiment, AMY detector at KEK; (3) Task D--Experiment, fixed target detectors at Fermilab; (4) Task F--Experiment, PEP detector at SLAC and pixel detector; (5) Task B--Theory, particle physics; and (6) Task E--Theory, particle physics.

  12. Search for hadronic b-->u decays

    NASA Astrophysics Data System (ADS)

    Albrecht, H.; Gläser, R.; Harder, G.; Krüger, A.; Nilsson, A. W.; Nippe, A.; Oest, T.; Reidenbach, M.; Schäfer, M.; Schmidt-Parzefall, W.; Schröder, H.; Schulz, H. D.; Sefkow, F.; Wurth, R.; Appuhn, R. D.; Drescher, A.; Hast, C.; Herrera, G.; Kolanoski, H.; Lange, A.; Lindner, A.; Mankel, R.; Scheck, H.; Schweda, G.; Spaan, B.; Walther, A.; Wegener, D.; Paulini, M.; Reim, K.; Volland, U.; Wegener, H.; Funk, W.; Stiewe, J.; Werner, S.; Ball, S.; Gabriel, J. C.; Geyer, C.; Hölscher, A.; Hofmann, W.; Holzer, B.; Khan, S.; Spengler, J.; Charlesworth, C. E. K.; Edwards, K. W.; Frisken, W. R.; Kapitza, H.; Krieger, P.; Kutschke, R.; Macfarlene, D. B.; McLean, K. W.; Orr, R. S.; Parsons, J. A.; Patel, P. M.; Prentice, J. D.; Seidel, S. C.; Swain, J. D.; Tsipolitis, G.; Tzamariudaki, K.; Yoon, T.-S.; Ruf, T.; Schael, S.; Schubert, K. R.; Strahl, K.; Waldi, R.; Weseler, S.; Boštjančič, B.; Kernel, G.; Križan, P.; Križnič, E.; Cronström, H. I.; Jönsson, L.; Babaev, A.; Danilo, M.; Fominykh, B.; Golutvin, A.; Gorelov, I.; Lubimov, V.; Rostovtsev, A.; Semenov, A.; Semenov, S.; Shevchenko, V.; Soloshenko, V.; Tchistilin, V.; Tichomirov, I.; Zaitsev, Yu.; Childers, R.; Darden, C. W.; Argus Collaboration

    1990-05-01

    Using the ARGUS detector at the e +e - storage ring DORIS II at DESY, we searched for b→u transitions in exclusive hadronic B meson decays. A systematic analysis of B decays into pions has been performed for decay modes with 2-7 pions in the final state. In none of the decays a positive signal was observed. The upper limits obtained on various branching ratios are consistent with the current model predictions.

  13. Nuclear Physics Laboratory, University of Colorado, Final Progress Report

    SciTech Connect

    Kinney, E.R., ed.

    2004-05-12

    OAK-B135 The results and progress of research funded by DOE grant number DOE-FG03-95ER40913 at the University of Colorado at Boulder is described. Includes work performed at the HERMES experiment at DESY to study the quark structure of the nucleon and the hadronization process in nuclei, as well as hadronic reactions studied at LAMPF, KEK, and Fermilab.

  14. Diffractive Higgs boson production at the Fermilab Tevatron and the CERN Large Hadron Collider.

    PubMed

    Enberg, R; Ingelman, G; Kissavos, A; Tîmneanu, N

    2002-08-19

    Improved possibilities to find the Higgs boson in diffractive events, having less hadronic activity, depend on whether the cross section is large enough. Based on the soft color interaction models that successfully describe diffractive hard scattering at DESY HERA and the Fermilab Tevatron, we find that only a few diffractive Higgs events may be produced at the Tevatron, but we predict a substantial rate at the CERN Large Hadron Collider.

  15. Archaeological Investigations at Sites 45-OK-2 and 45-OK-2A, Chief Joseph Dam Project, Washington.

    DTIC Science & Technology

    1984-01-01

    Microtus spp. - - 5 2 3 1 4 2 2 8 Peromyscus sanicutetus 1 1 2 1 a 4 3 1 14 7 Canidae 3 1 1 - 5 1 1 - 10 - Ca j p - - 5 1 1 1 1 1 7 1 Ursi des...I mandible fragment, 1 Innomlnate, I femur. Zone 4: 1 mandible, 1 mandible fragment, I humerus. Family Canidae Zone 1: 1 innominate fragment, 1

  16. U.S. Border Patrol OCONUS: Possible Contributions to the Whole of Government Approach to Stability Operations

    DTIC Science & Technology

    2010-06-11

    Agents (ACPA) Randall Baldwin, Gerald S. Bryan, and Anthony Porvaznik; Patrol Agents in Charge Gregory Bovino , Desi D. DeLeon, Vincent J. Hampel, and...leaders to improve relations with the DBE. 94 In 2001, Gregory Bovino was a Supervisory Border Patrol Agent (SBPA) with the BORTAC operating in...Honduras. Gregory Bovino is now a PAIC. PAIC Bovino helped organize and train host-nation border security forces in Honduras from the ground up through

  17. Operating experience with high beta superconducting rf cavities

    SciTech Connect

    Dylla, H.F.; Doolittle, L.R.; Benesch, J.F.

    1993-06-01

    The number of installed and operational {beta} = 1 superconducting rf cavities has grown significantly over the last two years in accelerator laboratories in Europe, Japan and the US. The total installed acceleration capability as of mid-1993 is approximately 1 GeV at nominal gradients. Major installations at CERN, DESY, KEK and CEBAF have provided large increments to the installed base and valuable operational experience. A selection of test data and operational experience gathered to date is reviewed.

  18. FEL beam characterization from measurements of the Wigner distribution function

    NASA Astrophysics Data System (ADS)

    Schäfer, Bernd; Flöter, Bernhard; Mey, Tobias; Juranic, Pavle; Kapitzki, Svea; Keitel, Barbara; Plönjes, Elke; Mann, Klaus; Tiedtke, Kai

    2011-10-01

    The Free-Electron-Laser FLASH at DESY has been characterized by a quantitative determination of the Wigner distribution function. The setup, comprising an ellipsodial mirror and a moveable extreme UV sensitive CCD detector, enables the mapping of two-dimensional phase spaces corresponding to the horizontal and vertical coordinate axes, respectively. For separable beams this yields the entire Wigner distribution, offering comprehensive information about spatial coherence properties, wavefront, beam profiles, as well as beam propagation parameters.

  19. Clinical Application of Ambient Ionization Mass Spectrometry

    PubMed Central

    Li, Li-Hua; Hsieh, Hua-Yi; Hsu, Cheng-Chih

    2017-01-01

    Ambient ionization allows mass spectrometry analysis directly on the sample surface under atmospheric pressure with almost zero sample pretreatment. Since the development of desorption electrospray ionization (DESI) in 2004, many other ambient ionization techniques were developed. Due to their simplicity and low operation cost, rapid and on-site clinical mass spectrometry analysis becomes real. In this review, we will highlight some of the most widely used ambient ionization mass spectrometry approaches and their applications in clinical study. PMID:28337399

  20. Current experiments in elementary-particle physics

    NASA Astrophysics Data System (ADS)

    Wohl, C. G.; Armstrong, F. E.; Rittenberg, A.

    1983-03-01

    Microfiche are included which contain summaries of 479 experiments in elementary particle physics. Experiments are included at the following laboratories: Brookhaven (ENL); CERN; DESY; Fermilab. (FNAL); Institute for Nuclear Studies (INS); KEK; LAMPF; Serpukhov (SERP); SIN; SLAC; and TRIUMP. Also, summries of proton decay experiments are included. A list of experiments and titles is included; and a beam-target-momentum index and a spokesperson index are given. Properties of beams at the facilities are tabulated.

  1. Current experiments in elementary-particle physics - March 1983

    SciTech Connect

    Wohl, C.G.; Armstrong, F.E.; Rittenberg, A.

    1983-03-01

    Microfiche are included which contain summaries of 479 experiments in elementary particle physics. Experiments are included at the following laboratories: Brookhaven (BNL); CERN; CESR; DESY; Fermilab (FNAL); Institute for Nuclear Studies (INS); KEK; LAMPF; Serpukhov (SERP); SIN; SLAC; and TRIUMF. Also, summaries of proton decay experiments are included. A list of experiments and titles is included; and a beam-target-momentum index and a spokesperson index are given. Properties of beams at the facilities are tabulated. (WHK)

  2. Experimental Program Final Technical Progress Report: 15 February 2007 to 30 September 2012

    SciTech Connect

    Kinney, Edward R.

    2014-09-12

    This is the final technical report of the grant DE-FG02-04ER41301 to the University of Colorado at Boulder entitled "Intermediate Energy Nuclear Physics" and describes the results of our funded activities during the period 15 February 2007 to 30 September 2012. These activities were primarily carried out at Fermilab, RHIC, and the German lab DESY. Significant advances in these experiments were carried out by members of the Colorado group and are described in detail.

  3. Federal Research: Super Collider Estimates and Germany’s Industrially Produced Magnets

    DTIC Science & Technology

    1991-02-12

    DESY Deutsches Elektronen-Synchrotron DOE Department of Energy GeV billion electron volts HEPAP High Energy Physics Advisory Panel HERA Hadron Electron...Advisory Panel ( HEPAP ) report indicated that reducing the energy would risk losing important physics. The panel fully endorsed the design as well as the...the Laboratory’s work. Two DOE reviews were completed by OER and ICE staff. At DOE’s request, the third independent review was conducted by the HEPAP

  4. Experimental Plans to Explore Dielectric Wakefield Acceleration in the THZ Regime

    SciTech Connect

    Lemery, F.; Mihalcea, D.; Piot, P.; Behrens, C.; Elsen, E.; Flottmann, K.; Gerth, C.; Kube, G.; Schmidt, B.; Osterhoff, J.; Stoltz, P.

    2011-09-07

    Dielectric wakefield accelerators have shown great promise toward high-gradient acceleration. We investigate the performances of a possible experiment under consideration at the FLASH facility in DESY to explore wakefield acceleration with an enhanced transformer ratio. The experiment capitalizes on a unique pulse shaping capability recently demonstrated at this facility. In addition, the facility incorporates a superconducting linear accelerator that could generate bunch trains with closely spaced bunches thereby opening the exploration of potential dynamical effects in dielectric wakefield accelerators.

  5. Data acqusition for the Zeus central tracking detector

    SciTech Connect

    Quinton, S.

    1989-04-01

    The Zeus experiment is being installed on the Hera electron-proton collider being built at the Desy laboratory in Hamburg. The high beam crossover rate of the Hera machine will provide experience in data acquisition and triggering relevant to the SSC environment. This paper describes the Transputer based data acquisition for the Zeus Central Tracking Detector, and outlines some proposed development work on the use of parallel processing techniques in this field.

  6. Radiative effects in scattering of polarized leptons by polarized nucleons and light nuclei

    SciTech Connect

    Igor Akushevich; A. Ilyichev; N. Shumeiko

    2001-07-01

    Recent developments in the field of radiative effects in polarized lepton-nuclear scattering are reviewed. The processes of inclusive, semi-inclusive, diffractive and elastic scattering are considered. The explicit formulae obtained within the covariant approach are discussed. FORTRAN codes POLRAD, RADGEN, HAPRAD, DIFFRAD and MASCARAD created on the basis of the formulae are briefly described. Applications for data analysis of the current experiments on lepton-nuclear scattering at CERN, DESY, SLAC and TJNAF are illustrated by numerical results.

  7. The HERA-B vertex detector system

    NASA Astrophysics Data System (ADS)

    Bauer, C.; Bräuer, M.; Glebe, T.; Hofmann, W.; Jagla, T.; Klefenz, F.; Knöpfle, K. T.; Pugatch, V.; Schmelling, M.; Schwingenheuer, B.; Sexauer, E.; Trunk, U.; Wanke, R.; Zurheide, F.; Abt, I.; Dressel, M.; Kisel, I.; Masciocchi, S.; Moshous, B.; Perschke, T.; Sang, M.; Schaller, S.; Wagner, W.

    2000-10-01

    The HERA-B experiment is being built to measure CP violation in the B-system using internal targets at the HERA proton storage ring at DESY. This paper presents an overview of its vertex detector which - apart from an additional superlayer - is realized by a system of 20 Roman pots containing seven superlayers of double-sided silicon microstrip detectors that are operated at 10 mm distance from the proton beam in a high-radiation environment.

  8. Current experiments in elementary particle physics. Revision

    SciTech Connect

    Galic, H.; Armstrong, F.E.; von Przewoski, B.

    1994-08-01

    This report contains summaries of 568 current and recent experiments in elementary particle physics. Experiments that finished taking data before 1988 are excluded. Included are experiments at BEPC (Beijing), BNL, CEBAF, CERN, CESR, DESY, FNAL, INS (Tokyo), ITEP (Moscow), IUCF (Bloomington), KEK, LAMPF, Novosibirsk, PNPI (St. Petersburg), PSI, Saclay, Serpukhov, SLAC, and TRIUMF, and also several underground and underwater experiments. Instructions are given for remote searching of the computer database (maintained under the SLAC/SPIRES system) that contains the summaries.

  9. Single-cycle Pulse Synthesis by Coherent Superposition of Ultra-broadband Optical Parametric Amplifiers

    DTIC Science & Technology

    2011-08-01

    Giulio Cerullo Politecnico di Milano Department of Physics Piazza Leonardo da Vinci 32 Milano, Italy 20133 EOARD GRANT 09-3101...UNIT NUMBER 7. PERFORMING ORGANIZATION NAME(S) AND ADDRESS(ES) Politecnico di Milano Department of Physics Piazza Leonardo da Vinci 32 Milano...Milano, Piazza L. Da Vinci 32, 20133 Milano, Italy, 4DESY-Center for Free-Electron Laser Science and Hamburg University, Notkestraße 85, D-22607 Hamburg

  10. Bunch length measurement at the Fermilab A0 photoinjector using a Martin-Puplett interferometer

    SciTech Connect

    Thurman-Keup, Randy; Fliller, Raymond Patrick; Kazakevich, Grigory; /Fermilab

    2008-05-01

    We present preliminary measurements of the electron bunch lengths at the Fermilab A0 Photoinjector using a Martin-Puplett interferometer on loan from DESY. The photoinjector provides a relatively wide range of bunch lengths through laser pulse width adjustment and compression of the beam using a magnetic chicane. We present comparisons of data with simulations that account for diffraction distortions in the signal and discuss future plans for improving the measurement.

  11. Capture cavity II results at FNAL

    SciTech Connect

    Branlard, Julien; Chase, Brian; Cancelo, G.; Carcagno, R.; Edwards, H.; Fliller, R.; Hanna, B.; Harms, Elvan; Hocker, A.; Koeth, T.; Kucera, M.; /Fermilab

    2007-06-01

    As part of the research and development towards the International Linear Collider (ILC), several test facilities have been developed at Fermilab. This paper presents the latest Low Level RF (LLRF) results obtained with Capture Cavity II (CCII) at the ILC Test Accelerator (ILCTA) test facility. The main focus will be on controls and RF operations using the SIMCON based LLRF system developed in DESY [1]. Details about hardware upgrades and future work will be discussed.

  12. Transition radiation effects in superconducting granules

    NASA Technical Reports Server (NTRS)

    Drukier, A. K.; Valette, C.; Waysand, G.; Peters, F.; Yuan, L. C. L.

    1975-01-01

    The paper examines the use of a superheated superconducting suspension as a transition radiation detector of relativistic charged particles. The suspensions would also be used for detecting low-energy X-ray photons. The DESY experiment for developing such a superconducting detector has been carried out at a 7 GeV electron synchrotron. The detection is shown to be based on the recordable flipping of the state of a single superconducting grain.

  13. Longitudinal Bunch Shape Diagnostics With Coherent Radiation And a Transverse Deflecting Cavity at TTF2

    SciTech Connect

    Grimm, O.; Frohlich, L.; Klose, K.; Nagl, M.; Peters, O.; Rossbach, J.; Schlarb, H.; Emma, P.J.; McCormick, D.; Ross, M.; Smith, T.J.; /SLAC

    2005-08-04

    At the DESY TTF2 linear accelerator three special techniques to characterize the longitudinal charge distribution of the electron bunches that drive the free-electron laser are currently under study: electro-optical sampling, far-infrared spectral analysis of coherent radiation and the use of a transverse deflecting cavity to streak the bunch. The principles and implementations of the latter two are described in this paper. Details on electro-optical sampling can be found in [1].

  14. [A failed experiment - Carl Friedrich von Weizsäcker, Jürgen Habermas and the Max-Planck Society].

    PubMed

    Leendertz, Ariane

    2014-01-01

    From 1970 to 1980 Carl Friedrich von Weizsäcker headed the Max-Planck-lnstitut zur Erforschung der Lebensbedingungen der wissenschaftlich-technischen Welt (MPI for the study of the living conditions of the world of science and technology) in Starnberg, jointly with Jürgen Habermas since 1971. From the start, the Max Planck Society regarded the new institute as an experiment that might perhaps be aborted a few years later. This is exactly what happened. With the retirement of Weizsäcker, his section was closed and the whole institute was renamed. In 1981. Habermas resigned, and then the institute was closed. This paper focusses on some of the problem constellations within the institute that partly explain its development and eventual closure: its birth out of the idea of scientific policy advice, the debates within the Max Planck Society and the complex relationship between Weizsäcker and Jürgen Habermas.

  15. Zur ethischen Dimension von Renaturierungsökologie und Ökosystemrenaturierung

    NASA Astrophysics Data System (ADS)

    Ott, Konrad

    Die wissenschaftlich angeleitete Ökosystemrena-turierung kann mittlerweile als eine etablierte Praxis im Bereich des Naturschutzes gelten. Diese Praxis bezieht sich notwendigerweise auf Ziele und Werte und weist damit auch eine naturethische Dimension auf. Daher hat diese Praxis die Aufmerksamkeit auch von Sozialwissenschaftlern und Ethikern auf sich gezogen. Dieses Kapitel geht der Frage nach, wie sich die naturethische Dimension der Ökosystemrenaturierung analysieren und inhaltlich bestimmen lässt. Hierzu erweist sich auch die Auseinandersetzung mit Philosophen als hilfreich, die der Ökosystemrenaturierung ein technizistisches Naturverständnis vorgeworfen haben. Am Ende des Kapitels wird ein in sich gestuftes mögliches naturethisches Selbstverständnis der Ökosystemrenaturierung diskutiert, das den an dieser Praxis Beteiligten Freiheitsgrade der Positionierung belässt.

  16. Grundlagen der Organisationsgestaltung

    NASA Astrophysics Data System (ADS)

    Spath, Dieter; Koch, Steffen

    In diesem Kapitel werden Grundlagen der Organisationsgestaltung dargestellt. Es scheint nahe liegend, diese Inhalte wie in einem Lehrbuch aufzubereiten. Schließlich handelt es sich um grundlegende Inhalte. Die Neufassung dieses Abschnitts ist aber stärker für Verantwortliche in Unternehmen geschrieben und weniger wissenschaftlich geprägt. Das "Lehrbuchwissen“ wird daher bewusst knapp gehalten. Das betrifft z.B. die Klärung des Organisationsbegriffes und die Fragen nach den Zielsetzungen und den Gestaltungsbereichen von Organisation. Stattdessen widmet sich das Kapitel ausführlicher den Fragen, ob es Trends in der Organisationsgestaltung gibt, welche wichtigen Einflussgrößen existieren und welche übergeordneten und beständigen Leitlinien es gibt.

  17. Neuausrichtung und Konsolidierung

    NASA Astrophysics Data System (ADS)

    Grohmann, Heinz

    Mit der Wahl von Wolfgang Wetzel zum Vorsitzenden der Deutschen Statistischen Gesellschaft im Jahre 1972 begann eine 32jährige Ära, in der die praktische und die theoretische Statistik in einem ausgewogenen Verhältnis gepflegt wurden. Ein regelmäßiger vierjähriger Wechsel im Vorsitz stärkte die Gemeinschaft und die praktische wie die wissenschaftliche Arbeit gleichermaßen. Die jährlichen Hauptversammlungen behandelten gesellschaftlich aktuelle wie zukunftsorientierte Themen, und die Ausschüsse sowie weitere Veranstaltungen gaben Gelegenheit zur Förderung und Pflege einer Vielzahl von Arbeitsgebieten der Statistik. Darüber wird nicht nur in diesem Kapitel, sondern auch in den Teilen II und III des Bandes berichtet.

  18. Räumliches Hören

    NASA Astrophysics Data System (ADS)

    Blauert, Jens; Braasch, Jonas

    Unsere Hörereignisse (Hörobjekte, Laute) existieren jeweils zu ihrer Zeit an ihrem Ort und sind mit jeweils spezifischen Eigenschaften ausgerüstet. "Räumliches Hören“ als wissenschaftliches Fachgebiet erforscht und beschreibt die Beziehungen zwischen den Orten sowie den räumlichen Ausdehnungen der Hörereignisse untereinander und zu den korrelierten Merkmalen anderer Ereignisse - vorwiegend Schallereignisse, aber z. B. auch physiologische Vorgänge, Ereignisse anderer Sinnesgebiete usw. (s. hierzu Blauert 1974 etc., woraus einige der folgenden Bilder entnommen sind). Übersichtsdarstellungen findet man z. B. auch bei (Bloch 1893, Pierce 1901, von Hornbostel 1926, Trimble 1928, Kietz 1953, Woodworth u. Schlosberg 1954, von Békésy 1960, Aschoff 1963, Keidel 1966, Erulkar 1972, Durlach u. Colburn 1978, Gatehouse 1979, Blauert 1983, Yost u. Gourevitch 1987, Wightman u. Kistler 1993, Begault 1994, Gilkey u. Anderson 1996).

  19. elecTUM: Umsetzung der eLearning-Strategie der Technischen Universität München

    NASA Astrophysics Data System (ADS)

    Rathmayer, Sabine; Gergintchev, Ivan

    An der TUM wurde ein umfassendes und integriertes eLearning-Konzept umgesetzt, welches Präsenzstudium und eLearning in allen Leistungsbereichen der Universität miteinander verzahnt. Ein besonderer Schwerpunkt lag dabei in der Schaffung einer effizienten und wettbewerbsfähigen integrierten eLearning Infrastruktur in Hinblick auf die noch weiter steigenden Studienanfängerzahlen ab dem Jahr 2011 sowie die Umsetzung von eBologna. Die Etablierung einer hochschulweiten Lernplattform stellte eine wesentliche Basis für die Umsetzung der eLearning-Strategie dar. Die wissenschaftliche und wirtschaftliche Anschlussfähigkeit im Hinblick auf eine Verwertung der Projektergebnisse wurde durch die aktive Beteiligung an einer Vielzahl hochschulübergreifender Arbeitskreise, Fachtagungen und Kooperationen, vor allem über Organisations- und Dienstleistungsmodelle sowie innovative technische Entwicklungen, sichergestellt.

  20. Implantate und Verfahren in der Augenheilkunde

    NASA Astrophysics Data System (ADS)

    Neuhann, Tobias H.

    Das in der Medizin mit am häufigsten verwendete Implantat weltweit ist die Intraokulare Linse (IOL). Die Gründe hierfür sind vielschichtig: einmal haben die Operationstechniken in den letzten 30 Jahren eine wesentliche Steigerung an Gleichmäßigkeit, Erfolg und Effizienz erfahren, zum anderen verursachen die gestiegenen Anforderungen des Alltags in den Industrienationen und im Berufsleben den höheren Anspruch an das Sehvermögen. Ist die menschliche Linse Ursache für schlechtes Sehvermögen, besteht meist eine Trübung des Linsenproteins. Diese Trübung nennt wird Volksmund Grauer Star genannt, wissenschaftlich die Katarakt (cataracta). Es gibt unterschiedliche Formen wie angeborene (congenita) oder erworbene, traumatische, krankheitsoder altersbedingte Formen [45]. Wird die eingetrübte Linse nun mittels moderner Operationsverfahren entfernt, muss für Ersatz dieses lichtbrechenden Mediums gesorgt werden [2].

  1. VDI-Richtlinien - mit Technischen Regeln Wirtschaftlichkeit erhöhen und Standards setzen

    NASA Astrophysics Data System (ADS)

    Mandelartz, Johannes

    Der Verein Deutscher Ingenieure e.V. (VDI) ist ein gemeinnütziger, wirtschaftlich und politisch unabhängiger, technisch-wissenschaftlicher Verein von Ingenieuren und Naturwissenschaftlern. Mit über 137 000 persönlich zugeordneten Mitgliedern ist er eine der größten Ingenieur-Vereinigungen Europas und gilt in Deutschland als führender Sprecher der Technik und der Ingenieure. 1856 gegründet, hat er viele für die Technik wesentliche Entwicklungen in Gang gesetzt, so im Bereich der technischen Überwachung, der technischen Regelsetzung und Normung, der Arbeitsstudien, im gewerblichen Rechtsschutz und im Patentwesen. Seit seiner Gründung sieht es der VDI als seine Aufgabe, "das Zusammenwirken aller geistiger Kräfte der Technik im Bewusstsein ethischer Verantwortung zu fördern“ und die Lebensmöglichkeiten aller Menschen durch Entwicklung und sinnvoller Anwendung technischer Mittel zu verbessern.

  2. Visualisation of abscisic acid and 12-oxo-phytodienoic acid in immature Phaseolus vulgaris L. seeds using desorption electrospray ionisation-imaging mass spectrometry

    NASA Astrophysics Data System (ADS)

    Enomoto, Hirofumi; Sensu, Takuya; Sato, Kei; Sato, Futoshi; Paxton, Thanai; Yumoto, Emi; Miyamoto, Koji; Asahina, Masashi; Yokota, Takao; Yamane, Hisakazu

    2017-02-01

    The plant hormone abscisic acid (ABA) and the jasmonic acid related-compound 12-oxo-phytodienoic acid (OPDA) play crucial roles in seed development, dormancy, and germination. However, a lack of suitable techniques for visualising plant hormones has restricted the investigation of their biological mechanisms. In the present study, desorption electrospray ionisation-imaging mass spectrometry (DESI-IMS), a powerful tool for visualising metabolites in biological tissues, was used to visualise ABA and OPDA in immature Phaseolus vulgaris L. seed sections. The mass spectra, peak values and chemical formulae obtained from the analysis of seed sections were consistent with those determined for ABA and OPDA standards, as were the precursor and major fragment ions observed in tandem mass spectrometry (MS/MS) imaging. Furthermore, the precursor and fragment ion images showed similar distribution patterns. In addition, the localisation of ABA and OPDA using DESI-IMS was confirmed using liquid chromatography-MS/MS (LC-MS/MS). The results indicated that ABA was mainly distributed in the radical and cotyledon of the embryo, whereas OPDA was distributed exclusively in external structures, such as the hilum and seed coat. The present study is the first to report the visualisation of plant hormones using IMS, and demonstrates that DESI-IMS is a promising technique for future plant hormone research.

  3. Matrix Effects in Biological Mass Spectrometry Imaging: Identification and Compensation

    SciTech Connect

    Lanekoff, Ingela T.; Stevens, Susan; Stenzel-Poore, Mary; Laskin, Julia

    2014-07-21

    Matrix effects in mass spectrometry imaging (MSI) may affect the observed molecular distribution in chemical and biological systems. In this study, we introduce an experimental approach that efficiently compensates for matrix effects in nanospray desorption electrospray ionization (nano-DESI) MSI without introducing any complexity into the experimental protocol. We demonstrate compensation for matrix effects in nano-DESI MSI of phosphatidylcholine (PC) in normal and ischemic mouse brain tissue by doping the nano-DESI solvent with PC standards. Specifically, we use mouse brain tissue of a middle cerebral artery occlusion (MCAO) stroke model with an ischemic region localized to one hemisphere of the brain. Due to similar suppression in ionization of endogenous PC molecules extracted from the tissue and PC standards added to the solvent, matrix effects are eliminated by normalizing the intensity of the sodium and potassium adducts of endogenous PC to the intensity of the corresponding adduct of the PC standard. This approach efficiently compensates for signal variations resulting from differences in the local concentrations of sodium and potassium in tissue sections and from the complexity of the extracted analyte mixture derived from local variations in molecular composition.

  4. Analysis of sexual assault evidence: statistical classification of condoms by ambient mass spectrometry.

    PubMed

    Mirabelli, Mario F; Ifa, Demian R; Sindona, Giovanni; Tagarelli, Antonio

    2015-05-01

    Desorption electrospray ionization mass spectrometry (DESI-MS) and easy ambient sonic-spray ionization mass spectrometry (EASI-MS) are employed here in the forensic analysis of chemical compounds found in condoms and relative traces, and their analytical performances are compared. Statistical analysis of data obtained from mass spectra only was applied in order to obtain classification rules for distinguishing ten types of condoms. In particular, two supervised chemometric techniques [linear discriminant analysis (LDA) and soft independent modeling of class analogy (SIMCA)] were carried out on absolute and relative intensity values to test the performances of statistical models in terms of predictive capacity. The achieved classification of samples was excellent because of the high prediction percentages of the method used both for DESI and EASI mass spectrometry analyses, confirming these two as potential ambient ionization techniques for forensic analyses in case of sexual assault crimes. EASI-MS showed 99% prediction ability for LDA using relative data and 100% prediction ability for SIMCA using both absolute and relative ones, while DESI showed 94% prediction ability for both LDA and SIMCA. The absence of any sample preparation technique gives advantages in terms of sample preservation and reduced contamination, allowing successive analyses to be performed on the same sample by other techniques.

  5. Isomaltulose production via yeast surface display of sucrose isomerase from Enterobacter sp. FMB-1 on Saccharomyces cerevisiae.

    PubMed

    Lee, Gil-Yong; Jung, Jong-Hyun; Seo, Dong-Ho; Hansin, Jantra; Ha, Suk-Jin; Cha, Jaeho; Kim, Yong-Sung; Park, Cheon-Seok

    2011-10-01

    The gene encoding sucrose isomerase from Enterobacter sp. FMB-1 species (ESI) was displayed on the cell surface of Saccharomyces cerevisiae EBY100 using a glycosylphosphatidylinositol (GPI) anchor attachment signal sequence. Fluorescence activated cell sorting (FACS) analysis and immunofluorescence microscopy confirmed the localization of ESI on the yeast cell surface. The displayed ESI (dESI) was stable at a broad range of temperatures (35-55 °C) and pHs (pH 5-7) with optimal temperature and pH at 45 °C and pH 7.0, respectively. In addition, the thermostability of the dESI was significantly enhanced compared with the recombinant ESI expressed in Escherichia coli. Biotransformation of sucrose to isomaltulose was observed in various ranges of substrate concentrations (50-250 mM) with a 6.4-7.4% conversion yield. It suggested that the bioconversion of sucrose to isomaltulose can be successfully performed by the dESI on the surface of host S. cerevisiae.

  6. Anti-theft device staining on banknotes detected by mass spectrometry imaging.

    PubMed

    Correa, Deleon Nascimento; Zacca, Jorge Jardim; Rocha, Werickson Fortunato de Carvalho; Borges, Rodrigo; de Souza, Wanderley; Augusti, Rodinei; Eberlin, Marcos Nogueira; Vendramini, Pedro Henrique

    2016-03-01

    We describe the identification and limits of detection of ink staining by mass spectrometry imaging (MSI), as used in anti-theft devices (ATDs). Such ink staining is applied to banknotes during automated teller machine (ATM) explosions. Desorption electrospray ionization (DESI) coupled with high-resolution and high-accuracy orbitrap mass spectrometry (MS) and a moving stage device were applied to obtain 2D molecular images of the major dyes used for staining, that is, 1-methylaminoanthraquinone (MAAQ), rhodamine B (RB) and rhodamine 6G (R6G). MAAQ could not be detected because of its inefficient desorption by DESI from the banknote cellulose surface. By contrast, ATD staining on banknotes is perceptible by the human naked eye only at concentrations higher than 0.2 μg cm(-2), whereas both RB and R6G at concentrations 200 times lower (as low as 0.001 μg cm(-2)) could be easily detected and imaged by DESI-MSI, with selective and specific identification of each analyte and their spatial distribution on samples from suspects. This technique is non-destructive, and no sample preparation is required, which ensures sample preservation for further forensic investigations.

  7. Imaging Nicotine in Rat Brain Tissue by Use of Nanospray Desorption Electrospray Ionization Mass Spectrometry

    SciTech Connect

    Lanekoff, Ingela T.; Thomas, Mathew; Carson, James P.; Smith, Jordan N.; Timchalk, Charles; Laskin, Julia

    2013-01-15

    Imaging mass spectrometry offers simultaneous detection of drugs, drug metabolites and endogenous substances in a single experiment. This is important when evaluating effects of a drug on a complex organ system such as the brain, where there is a need to understand how regional drug distribution impacts function. Nicotine is an addictive drug and its action in the brain is of high interest. Here we use nanospray desorption electrospray ionization, nano-DESI, imaging to discover the localization of nicotine in rat brain tissue after in vivo administration of nicotine. Nano-DESI is a new ambient technique that enables spatially-resolved analysis of tissue samples without special sample pretreatment. We demonstrate high sensitivity of nano-DESI imaging that enables detection of only 0.7 fmole nicotine per pixel in the complex brain matrix. Furthermore, by adding deuterated nicotine to the solvent, we examined how matrix effects, ion suppression, and normalization affect the observed nicotine distribution. Finally, we provide preliminary results suggesting that nicotine localizes to the hippocampal substructure called dentate gyrus.

  8. Visualisation of abscisic acid and 12-oxo-phytodienoic acid in immature Phaseolus vulgaris L. seeds using desorption electrospray ionisation-imaging mass spectrometry

    PubMed Central

    Enomoto, Hirofumi; Sensu, Takuya; Sato, Kei; Sato, Futoshi; Paxton, Thanai; Yumoto, Emi; Miyamoto, Koji; Asahina, Masashi; Yokota, Takao; Yamane, Hisakazu

    2017-01-01

    The plant hormone abscisic acid (ABA) and the jasmonic acid related-compound 12-oxo-phytodienoic acid (OPDA) play crucial roles in seed development, dormancy, and germination. However, a lack of suitable techniques for visualising plant hormones has restricted the investigation of their biological mechanisms. In the present study, desorption electrospray ionisation-imaging mass spectrometry (DESI-IMS), a powerful tool for visualising metabolites in biological tissues, was used to visualise ABA and OPDA in immature Phaseolus vulgaris L. seed sections. The mass spectra, peak values and chemical formulae obtained from the analysis of seed sections were consistent with those determined for ABA and OPDA standards, as were the precursor and major fragment ions observed in tandem mass spectrometry (MS/MS) imaging. Furthermore, the precursor and fragment ion images showed similar distribution patterns. In addition, the localisation of ABA and OPDA using DESI-IMS was confirmed using liquid chromatography-MS/MS (LC-MS/MS). The results indicated that ABA was mainly distributed in the radical and cotyledon of the embryo, whereas OPDA was distributed exclusively in external structures, such as the hilum and seed coat. The present study is the first to report the visualisation of plant hormones using IMS, and demonstrates that DESI-IMS is a promising technique for future plant hormone research. PMID:28211480

  9. Production of superconducting 1.3-GHz cavities for the European X-ray Free Electron Laser

    NASA Astrophysics Data System (ADS)

    Singer, W.; Brinkmann, A.; Brinkmann, R.; Iversen, J.; Matheisen, A.; Moeller, W.-D.; Navitski, A.; Reschke, D.; Schaffran, J.; Sulimov, A.; Walker, N.; Weise, H.; Michelato, P.; Monaco, L.; Pagani, C.; Wiencek, M.

    2016-09-01

    The production of over 800 1.3-GHz superconducting (SC) cavities for the European X-ray Free Electron Laser (EXFEL), the largest in the history of cavity fabrication, has now been successfully completed. In the past, manufacturing of SC resonators was only partly industrialized; the main challenge for the EXFEL production was transferring the high-performance surface treatment to industry. The production was shared by the two companies RI Research Instruments GmbH (RI) and Ettore Zanon S.p.A. (EZ) on the principle of "build to print". DESY provided the high-purity niobium and NbTi for the resonators. Conformity with the European Pressure Equipment Directive (PED) was developed together with the contracted notified body TUEV NORD. New or upgraded infrastructure has been established at both companies. Series production and delivery of fully-equipped cavities ready for cold rf testing was started in December 2012, and finished in December 2015. More than half the cavities delivered to DESY as specified (referred to "as received") fulfilled the EXFEL specification. Further improvement of low-performing cavities was achieved by supplementary surface treatment at DESY or at the companies. The final achieved average gradient exceeded the EXFEL specification by approximately 25%. In the following paper, experience with the 1.3-GHz cavity production for EXFEL is reported and the main lessons learned are discussed.

  10. Ambient Ionization and FAIMS Mass Spectrometry for Enhanced Imaging of Multiply Charged Molecular Ions in Biological Tissues

    PubMed Central

    Feider, Clara L.; Elizondo, Natalia

    2017-01-01

    Ambient ionization mass spectrometry imaging (MSI) has been increasingly used to investigate the molecular distribution of biological tissue samples. Here, we report the integration and optimization of desorption electrospray ionization (DESI) and liquid-microjunction surface sampling probe (LMJ-SSP) with a chip-based high-field asymmetric waveform ion mobility spectrometry (FAIMS) device to image metabolites, lipids, and proteins in biological tissue samples. Optimized FAIMS parameters for specific molecular classes enabled semitargeted detection of multiply charged molecular species at enhanced signal-to-noise ratios (S/N), improved visualization of spatial distributions, and, most importantly, allowed detection of species which were unseen by ambient ionization MSI alone. Under static DESI-FAIMS conditions selected for transmission of doubly charged cardiolipins (CL), for example, detection of 71 different CL species was achieved in rat brain, 23 of which were not observed by DESI alone. Diagnostic CL were imaged in a human thyroid tumor sample with reduced interference of isobaric species. LMJ-SSP-FAIMS enabled detection of 84 multiply charged protein ions in rat brain tissue, 66 of which were exclusive to this approach. Spatial visualization of proteins in substructures of rat brain, and in human ovarian cancerous, necrotic, and normal tissues was achieved. Our results indicate that integration of FAIMS with ambient ionization MS allows improved detection and imaging of selected molecular species. We show that this methodology is valuable in biomedical applications of MSI for detection of multiply charged lipids and proteins from biological tissues. PMID:27782388

  11. Detection of Metastatic Breast and Thyroid Cancer in Lymph Nodes by Desorption Electrospray Ionization Mass Spectrometry Imaging

    NASA Astrophysics Data System (ADS)

    Zhang, Jialing; Feider, Clara L.; Nagi, Chandandeep; Yu, Wendong; Carter, Stacey A.; Suliburk, James; Cao, Hop S. Tran; Eberlin, Livia S.

    2017-02-01

    Ambient ionization mass spectrometry has been widely applied to image lipids and metabolites in primary cancer tissues with the purpose of detecting and understanding metabolic changes associated with cancer development and progression. Here, we report the use of desorption electrospray ionization mass spectrometry (DESI-MS) to image metastatic breast and thyroid cancer in human lymph node tissues. Our results show clear alterations in lipid and metabolite distributions detected in the mass spectra profiles from 42 samples of metastatic thyroid tumors, metastatic breast tumors, and normal lymph node tissues. 2D DESI-MS ion images of selected molecular species allowed discrimination and visualization of specific histologic features within tissue sections, including regions of metastatic cancer, adjacent normal lymph node, and fibrosis or adipose tissues, which strongly correlated with pathologic findings. In thyroid cancer metastasis, increased relative abundances of ceramides and glycerophosphoinisitols were observed. In breast cancer metastasis, increased relative abundances of various fatty acids and specific glycerophospholipids were seen. Trends in the alterations in fatty acyl chain composition of lipid species were also observed through detailed mass spectra evaluation and chemical identification of molecular species. The results obtained demonstrate DESI-MSI as a potential clinical tool for the detection of breast and thyroid cancer metastasis in lymph nodes, although further validation is needed.

  12. Epithelial ovarian carcinoma diagnosis by desorption electrospray ionization mass spectrometry imaging

    PubMed Central

    Dória, Maria Luisa; McKenzie, James S.; Mroz, Anna; Phelps, David L.; Speller, Abigail; Rosini, Francesca; Strittmatter, Nicole; Golf, Ottmar; Veselkov, Kirill; Brown, Robert; Ghaem-Maghami, Sadaf; Takats, Zoltan

    2016-01-01

    Ovarian cancer is highly prevalent among European women, and is the leading cause of gynaecological cancer death. Current histopathological diagnoses of tumour severity are based on interpretation of, for example, immunohistochemical staining. Desorption electrospray mass spectrometry imaging (DESI-MSI) generates spatially resolved metabolic profiles of tissues and supports an objective investigation of tumour biology. In this study, various ovarian tissue types were analysed by DESI-MSI and co-registered with their corresponding haematoxylin and eosin (H&E) stained images. The mass spectral data reveal tissue type-dependent lipid profiles which are consistent across the n = 110 samples (n = 107 patients) used in this study. Multivariate statistical methods were used to classify samples and identify molecular features discriminating between tissue types. Three main groups of samples (epithelial ovarian carcinoma, borderline ovarian tumours, normal ovarian stroma) were compared as were the carcinoma histotypes (serous, endometrioid, clear cell). Classification rates >84% were achieved for all analyses, and variables differing statistically between groups were determined and putatively identified. The changes noted in various lipid types help to provide a context in terms of tumour biochemistry. The classification of unseen samples demonstrates the capability of DESI-MSI to characterise ovarian samples and to overcome existing limitations in classical histopathology. PMID:27976698

  13. Spatially-Resolved Analysis of Glycolipids and Metabolites in Living Synechococcus sp. PCC7002 Using Nanospray Desorption Electrospray Ionization

    SciTech Connect

    Lanekoff, Ingela T.; Geydebrekht, Oleg V.; Pinchuk, Grigoriy E.; Konopka, Allan; Laskin, Julia

    2013-04-07

    Microorganisms release a diversity of organic compounds that couple interspecies metabolism, enable communication, or provide benefits to other microbes. Increased knowledge of microbial metabolite production will contribute to understanding of the dynamic microbial world and can potentially lead to new developments in drug discovery, biofuel production, and clinical research. Nanospray desorption electrospray ionization (nano-DESI) is an ambient ionization technique that enables detailed chemical characterization of molecules from a specific location on a surface without special sample pretreatment. Due to its ambient nature, living bacterial colonies growing on agar plates can be rapidly and non-destructively analyzed. We performed spatially resolved nano-DESI analysis of living Synechococcus sp. PCC 7002 colonies on agar plates. We use high resolution mass spectrometry and MS/MS analysis of the living Synechococcus sp. PCC 7002 colonies to detect metabolites and lipids, and confirm their identities. We found that despite the high salt content of the agar (osmolarity ca. 700 mM), nano-DESI analysis enables detailed characterization of metabolites produced by the colony. Using this technique, we identified several glycolipids found on the living colonies and examined the effect of the age of the colony on the chemical gradient of glucosylglycerol secreted onto agar.

  14. Intraoperative mass spectrometry mapping of an onco-metabolite to guide brain tumor surgery

    PubMed Central

    Santagata, Sandro; Eberlin, Livia S.; Norton, Isaiah; Calligaris, David; Feldman, Daniel R.; Ide, Jennifer L.; Liu, Xiaohui; Wiley, Joshua S.; Vestal, Matthew L.; Ramkissoon, Shakti H.; Orringer, Daniel A.; Gill, Kristen K.; Dunn, Ian F.; Dias-Santagata, Dora; Ligon, Keith L.; Jolesz, Ferenc A.; Golby, Alexandra J.; Cooks, R. Graham; Agar, Nathalie Y. R.

    2014-01-01

    For many intraoperative decisions surgeons depend on frozen section pathology, a technique developed over 150 y ago. Technical innovations that permit rapid molecular characterization of tissue samples at the time of surgery are needed. Here, using desorption electrospray ionization (DESI) MS, we rapidly detect the tumor metabolite 2-hydroxyglutarate (2-HG) from tissue sections of surgically resected gliomas, under ambient conditions and without complex or time-consuming preparation. With DESI MS, we identify isocitrate dehydrogenase 1-mutant tumors with both high sensitivity and specificity within minutes, immediately providing critical diagnostic, prognostic, and predictive information. Imaging tissue sections with DESI MS shows that the 2-HG signal overlaps with areas of tumor and that 2-HG levels correlate with tumor content, thereby indicating tumor margins. Mapping the 2-HG signal onto 3D MRI reconstructions of tumors allows the integration of molecular and radiologic information for enhanced clinical decision making. We also validate the methodology and its deployment in the operating room: We have installed a mass spectrometer in our Advanced Multimodality Image Guided Operating (AMIGO) suite and demonstrate the molecular analysis of surgical tissue during brain surgery. This work indicates that metabolite-imaging MS could transform many aspects of surgical care. PMID:24982150

  15. Evaluation of medical research performance--position paper of the Association of the Scientific Medical Societies in Germany (AWMF).

    PubMed

    Herrmann-Lingen, Christoph; Brunner, Edgar; Hildenbrand, Sibylle; Loew, Thomas H; Raupach, Tobias; Spies, Claudia; Treede, Rolf-Detlef; Vahl, Christian-Friedrich; Wenz, Hans-Jürgen

    2014-01-01

    Ziele: Die Evaluation medizinischer Forschungsleistung ist eine zentrale Voraussetzung für die gezielte Weiterentwicklung von Fakultäten, Forschungsschwerpunkten, Instituten bzw. Kliniken sowie Wissenschaftlerkarrieren. Sie basiert aber vielfach auf unklaren Zielvorstellungen und fragwürdigen Methoden und kann zu Fehlsteuerungen führen. Ziel der vorliegenden Arbeit ist eine Positionsbestimmung der wissenschaftlichen Medizin gegenüber den Zielen, Methoden und Konsequenzen ihrer Evaluation. Methoden: Im Rahmen des Berliner Forums der AWMF vom 18.10.2013 wurden von internationalen Experten Befunde zur Methodik der Evaluation medizinischer Forschungsleistung referiert, von Vertretern relevanter Wissenschaftsorganisationen diskutiert und in drei Adhoc-Schreibgruppen in einen Textentwurf gefasst. Dieser wurde mehrfach in der AWMF-Kommission für Leistungsevaluation in Forschung und Lehre sowie im AWMF-Präsidium diskutiert und in der vorliegenden finalen Fassung konsentiert.Ergebnisse: Die AWMF empfiehlt eine Veränderung des Systems der Bewertung medizinischer Forschungsleistungen. Evaluationen sollten eine a priori klar definierte und kommunizierte Zielsetzung besitzen und neben summativen auch formative Elemente enthalten. Neben sinnvollen aber nur in längeren Intervallen praktikablen informierten peer reviews können auch objektive Indikatoren zur Evaluation eingesetzt werden. Die Verwendung des Journal Impact Factors zur Bewertung einzelner Publikationen oder ihrer Autoren wird dabei abgelehnt. Der wissenschaftliche „Impact“ erfordert vielmehr eine multidimensionale Beurteilung, in der z.B. normierte Zitationsraten wissenschaftlicher Publikationen ebenso Berücksichtigung finden wie andere Formen der Rezeption in Fachwelt und Öffentlichkeit sowie Tätigkeiten im Bereich der Wissenschaftsorganisation, -synthese und -kommunikation. Daneben werden Vorschläge zu einer differenzierten Bewertung von Drittmitteleinwerbung und Nachwuchsförderung gemacht

  16. IGCC repowering project clean coal II project public design report. Annual report, October 1992--September 1993

    SciTech Connect

    1993-10-01

    Combustion Engineering, Inc. (CE) is participating in a $270 million coal gasification combined cycle repowering project that was designed to provide a nominal 60 MW of electricity to City, Water, Light and Power (CWL&P) in Springfield, Illinois. The Integrated Gasification Combined Cycle (IGCC) system consists of CE`s air-blown entrained flow two-stage gasifier; an advanced hot gas cleanup system; a combustion turbine adapted to use low-BTU gas; and all necessary coal handling equipment, The project is currently completing the second budget period of five. The major activities to date are: (1) Establishment of a design, cost, and schedule for the project; (2) Establishment of financial commitments; (3) Acquire design and modeling data; (4) Establishment of an approved for design (AFD) engineering package; (5) Development of a detailed cost estimate; (6) Resolution of project business issues; (7) CWL&P renewal and replacement activities; and (8) Application for environmental air permits. A Project Management Plan was generated, The conceptual design of the plant was completed and a cost and schedule baseline for the project was established in Budget Period One. This information was used to establish AFD Process Flow Diagrams, Piping and Instrument Diagrams, Equipment Data Sheets, material take offs, site modification plans and other information necessary to develop a plus or minus 20% cost estimate. Environmental permitting activities were accomplished, including the Air Permit Application, completion of the National Environmental Policy Act process, and the draft Environmental Monitoring Plan. At the end of 1992 the DOE requested that Duke Engineering and Services Inc., (DESI) be used to complete the balance of plant cost estimate. DESI was retained to do this work, DESI completed the material take off estimate and included operations, maintenance, and startup in the estimate.

  17. Flame Design: A Novel Approach Developed to Produce Clean, Efficient Diffusion Flames

    NASA Technical Reports Server (NTRS)

    Axelbaum, Richard L.; Urban, David L.; Sunderland, Peter B.; Chao, Beei-Huan

    2000-01-01

    Soot formation and flame extinction are vital concerns in the combustion of fossil fuels. In particular, soot is responsible for pollutant emissions, and extinction can cause inefficient or unstable burning. Normal-gravity experiments have demonstrated that flames can be designed to improve both characteristics by redirecting some or all of the nitrogen from the oxidizer into the fuel. Such nitrogen exchange can produce permanently blue flames, which are soot free under all possible flame conditions. Furthermore, this approach can lead to stronger, extinction-resistant flames. Past investigations of nitrogen exchange were unable to identify the physical mechanisms responsible for its benefits because these mechanisms cannot be isolated when normal-gravity flames are studied. In contrast, the Diffusion Flame Extinction and Soot Inception (DESI) experiment considers spherical flames, where nearly perfect spherical symmetry affords new levels of control. Because of buoyancy, spherical flames cannot be created in Earth s gravity. DESI was conceived by principal investigator Professor R.L. Axelbaum of Washington University in St. Louis. Tests to date have utilized the 2.2-Second Drop Tower at the NASA Glenn Research Center at Lewis Field. The experiment is slated for testing aboard the International Space Station in a few years. Two mechanisms have been proposed to explain the connection between nitrogen exchange and permanently blue flames. These are the structure (chemical effects) and hydrodynamics (flow direction and speed). In normal-gravity flames, the structure and hydrodynamics are coupled, since nitrogen exchange simultaneously modifies both. Spherical microgravity flames, on the other hand, allow independent control of these factors. Specifically, structure can be modified via nitrogen exchange, and flow direction can be reversed by swapping the ambient and burner-feed gases. In DESI, these variations can be accomplished without changing the theoretical flame

  18. Genome-Wide Scans for Delineation of Candidate Genes Regulating Seed-Protein Content in Chickpea

    PubMed Central

    Upadhyaya, Hari D.; Bajaj, Deepak; Narnoliya, Laxmi; Das, Shouvik; Kumar, Vinod; Gowda, C. L. L.; Sharma, Shivali; Tyagi, Akhilesh K.; Parida, Swarup K.

    2016-01-01

    Identification of potential genes/alleles governing complex seed-protein content (SPC) is essential in marker-assisted breeding for quality trait improvement of chickpea. Henceforth, the present study utilized an integrated genomics-assisted breeding strategy encompassing trait association analysis, selective genotyping in traditional bi-parental mapping population and differential expression profiling for the first-time to understand the complex genetic architecture of quantitative SPC trait in chickpea. For GWAS (genome-wide association study), high-throughput genotyping information of 16376 genome-based SNPs (single nucleotide polymorphism) discovered from a structured population of 336 sequenced desi and kabuli accessions [with 150–200 kb LD (linkage disequilibrium) decay] was utilized. This led to identification of seven most effective genomic loci (genes) associated [10–20% with 41% combined PVE (phenotypic variation explained)] with SPC trait in chickpea. Regardless of the diverse desi and kabuli genetic backgrounds, a comparable level of association potential of the identified seven genomic loci with SPC trait was observed. Five SPC-associated genes were validated successfully in parental accessions and homozygous individuals of an intra-specific desi RIL (recombinant inbred line) mapping population (ICC 12299 × ICC 4958) by selective genotyping. The seed-specific expression, including differential up-regulation (>four fold) of six SPC-associated genes particularly in accessions, parents and homozygous individuals of the aforementioned mapping population with a high level of contrasting SPC (21–22%) was evident. Collectively, the integrated genomic approach delineated diverse naturally occurring novel functional SNP allelic variants in six potential candidate genes regulating SPC trait in chickpea. Of these, a non-synonymous SNP allele-carrying zinc finger transcription factor gene exhibiting strong association with SPC trait was found to be the most

  19. A Genome-wide Combinatorial Strategy Dissects Complex Genetic Architecture of Seed Coat Color in Chickpea

    PubMed Central

    Bajaj, Deepak; Das, Shouvik; Upadhyaya, Hari D.; Ranjan, Rajeev; Badoni, Saurabh; Kumar, Vinod; Tripathi, Shailesh; Gowda, C. L. Laxmipathi; Sharma, Shivali; Singh, Sube; Tyagi, Akhilesh K.; Parida, Swarup K.

    2015-01-01

    The study identified 9045 high-quality SNPs employing both genome-wide GBS- and candidate gene-based SNP genotyping assays in 172, including 93 cultivated (desi and kabuli) and 79 wild chickpea accessions. The GWAS in a structured population of 93 sequenced accessions detected 15 major genomic loci exhibiting significant association with seed coat color. Five seed color-associated major genomic loci underlying robust QTLs mapped on a high-density intra-specific genetic linkage map were validated by QTL mapping. The integration of association and QTL mapping with gene haplotype-specific LD mapping and transcript profiling identified novel allelic variants (non-synonymous SNPs) and haplotypes in a MATE secondary transporter gene regulating light/yellow brown and beige seed coat color differentiation in chickpea. The down-regulation and decreased transcript expression of beige seed coat color-associated MATE gene haplotype was correlated with reduced proanthocyanidins accumulation in the mature seed coats of beige than light/yellow brown seed colored desi and kabuli accessions for their coloration/pigmentation. This seed color-regulating MATE gene revealed strong purifying selection pressure primarily in LB/YB seed colored desi and wild Cicer reticulatum accessions compared with the BE seed colored kabuli accessions. The functionally relevant molecular tags identified have potential to decipher the complex transcriptional regulatory gene function of seed coat coloration and for understanding the selective sweep-based seed color trait evolutionary pattern in cultivated and wild accessions during chickpea domestication. The genome-wide integrated approach employed will expedite marker-assisted genetic enhancement for developing cultivars with desirable seed coat color types in chickpea. PMID:26635822

  20. Current experiments in elementary particle physics

    SciTech Connect

    Wohl, C.G.; Armstrong, F.E., Oyanagi, Y.; Dodder, D.C.; Ryabov, Yu.G.; Frosch, R.; Olin, A.; Lehar, F.; Moskalev, A.N.; Barkov, B.P.

    1987-03-01

    This report contains summaries of 720 recent and current experiments in elementary particle physics (experiments that finished taking data before 1980 are excluded). Included are experiments at Brookhaven, CERN, CESR, DESY, Fermilab, Moscow Institute of Theoretical and Experimental Physics, Tokyo Institute of Nuclear Studies, KEK, LAMPF, Leningrad Nuclear Physics Institute, Saclay, Serpukhov, SIN, SLAC, and TRIUMF, and also experiments on proton decay. Instructions are given for searching online the computer database (maintained under the SLAC/SPIRES system) that contains the summaries. Properties of the fixed-target beams at most of the laboratories are summarized.

  1. RF design and processing of a power coupler for third harmonic superconducting cavities

    SciTech Connect

    Li, Jianjian; Harms, Elvin; Kubicki, Tom; Nicklaus, Dennis; Olis, Daniel; Prieto, Peter; Reid, John; Solyak, Nikolay; Wong, Thomas; /IIT, Chicago

    2007-06-01

    The FLASH user facility providing free electron laser radiation is built based on the TTF project at DESY. Fermilab has the responsibility for the design and processing of a third harmonic, 3.9 GHz, superconducting cavity which is powered via a coaxial power coupler. Six power couplers have been manufactured at CPI after successful design of the power coupler including RF simulation, multipacting calculation, and thermal analysis. The power couplers are being tested and processed with high pulsed power in an elaborate test stand at Fermilab now. This paper presents the RF design and processing work of the power coupler.

  2. Design and performance of a lead fluoride detector as a luminosity monitor

    NASA Astrophysics Data System (ADS)

    Pérez Benito, R.; Khaneft, D.; O'Connor, C.; Capozza, L.; Diefenbach, J.; Gläser, B.; Ma, Y.; Maas, F. E.; Rodríguez Piñeiro, D.

    2016-08-01

    Precise luminosity measurements for the OLYMPUS two-photon exchange experiment at DESY were performed by counting scattering events with alternating beams of electrons and positrons incident on atomic electrons in a gaseous hydrogen target. Final products of Møller, Bhabha, and pair annihilation interactions were observed using a pair of lead fluoride Cherenkov calorimeters with custom housings and electronics, adapted from a system used by the A4 parity violation experiment at MAMI. This paper describes the design, calibration, and operation of these detectors. An explanation of the Monte Carlo methods used to simulate the physical processes involved both at the scattering vertices and in the detector apparatus is also included.

  3. Control System Design for Automatic Cavity Tuning Machines

    SciTech Connect

    Carcagno, R.; Khabiboulline, T.; Kotelnikov, S.; Makulski, A.; Nehring, R.; Nogiec, J.; Ross, M.; Schappert, W.; Goessel, A.; Iversen, J.; Klinke, D.; /DESY

    2009-05-01

    A series of four automatic tuning machines for 9-cell TESLA-type cavities are being developed and fabricated in a collaborative effort among DESY, FNAL, and KEK. These machines are intended to support high-throughput cavity fabrication for construction of large SRF-based accelerator projects. Two of these machines will be delivered to cavity vendors for the tuning of XFEL cavities. The control system for these machines must support a high level of automation adequate for industrial use by non-experts operators. This paper describes the control system hardware and software design for these machines.

  4. Layout and first results of the nanotomography endstation at the P05 beamline at PETRA III

    SciTech Connect

    Ogurreck, M.; Greving, I.; Beckmann, F.; Wilde, F.; Müller, M.; Marschall, F.; Vogt, H.; Last, A.; Rosario, J. J. do; Leib, E. W.

    2016-01-28

    The Helmholtz-Zentrum Geesthacht operates the P05 Imaging Beamline at the DESY storage ring PETRA III. This beamline is dedicated to micro- and nanotomography with two endstations. This paper will present the nanotomography endstation layout and first results obtained from commissioning and test experiments. First tests have been performed with CRLs as X-ray objectives and newly developed rolled X-ray prism lenses as condenser optics. This setup allows a resolution of 100 nm half period with an effective detector pixel size of 15nm. A first tomograph of a photonic glass sample was measured in early 2014.

  5. Diffractive hadroproduction of W{sup {+-}} and Z{sup 0} bosons at high energies

    SciTech Connect

    Gay Ducati, M. B.; Machado, M. M.; Machado, M. V. T.

    2007-06-01

    Results from a phenomenological analysis of W and Z hard diffractive hadroproduction at high energies are reported. Using the Regge factorization approach, we consider the recent diffractive parton density functions extracted by the H1 Collaboration at DESY-HERA. In addition, we take into account multiple Pomeron exchange corrections considering a gap survival probability factor. It is found that the ratio of diffractive to nondiffractive boson production is in good agreement with the CDF and D0 data. We make predictions which could be compared to future measurements at the LHC.

  6. The Superconducting RF Photoinjector at ELBE--First Operational Experience

    SciTech Connect

    Teichert, J.; Arnold, A.; Buettig, H.; Janssen, D.; Justus, M.; Lehnert, U.; Michel, P.; Murcek, P.; Schamlott, A.; Schneider, C.; Schurig, R.; Staufenbiel, F.; Xiang, R.; Kamps, T.; Rudolph, J.; Schenk, M.; Klemz, G.; Will, I.

    2009-08-04

    An RF photoinjector with a superconducting cavity (SRF gun) for installation at the Radiation Source ELBE was developed within a collaboration of BESSY, DESY, FZD, and MBI. This new and promising injector type allows CW operation and has the potential for the production of high-brightness electron beams. The gun cryostat, the electron diagnostic beamline, and the driver laser with optical beamline were installed. In November 2007 the first beam was produced. Results of the beam parameter measurements with Cs{sub 2}Te photo cathodes are presented.

  7. Planetary Mission Entry Vehicles Quick Reference Guide. Version 3.0

    NASA Technical Reports Server (NTRS)

    Davies, Carol; Arcadi, Marla

    2006-01-01

    This is Version 3.0 of the planetary mission entry vehicle document. Three new missions, Re-entry F, Hayabusa, and ARD have been added to t he previously published edition (Version 2.1). In addition, the Huyge ns mission has been significantly updated and some Apollo data correc ted. Due to the changing nature of planetary vehicles during the desi gn, manufacture and mission phases, and to the variables involved in measurement and computation, please be aware that the data provided h erein cannot be guaranteed. Contact Carol Davies at cdavies@mail.arc. nasa.gov to correct or update the current data, or to suggest other missions.

  8. Circularly polarized carrier-envelope-phase stable attosecond pulse generation based on coherent undulator radiation.

    PubMed

    Tóth, Gy; Tibai, Z; Nagy-Csiha, Zs; Márton, Zs; Almási, G; Hebling, J

    2015-09-15

    In this Letter, we present a new method for generation of circularly polarized attosecond pulses. According to our calculations, shape-controlled, carrier-envelope-phase stable pulses of several hundred nanojoule energy could be produced by exploitation of the coherent undulator radiation of an electron bunch. Our calculations are based on an existing particle accelerator system (FLASH II in DESY, Germany). We investigated the energy dependence of the attosecond pulses on the energy of electrons and the parameters of the radiator undulator, which generate the electromagnetic radiation.

  9. A balloon-borne ionization spectrometer with very large aperture for the detection of high energy cosmic rays

    NASA Technical Reports Server (NTRS)

    Atallah, K.; Modlinger, A.; Schmidt, W. K. H.; Cleghorn, T. F.

    1975-01-01

    A balloon experiment which was used to determine the chemical composition of very high-energy cosmic rays up to and beyond 100 GeV/nucleon is described. The detector had a geometric factor of 1 sq m sr and a total weight on the balloon of 2100 kg. The apparatus consisted of an ionization spectrometer, spark chambers, and plastic scintillation and Cherenkov counters. It was calibrated at CERN up to 24 GeV/c protons and at DESY up to 7 GeV/c electrons. In October 1972 it was flown successfully on a stratospheric balloon.

  10. Waste-to-Energy Projects at Army Installations

    DTIC Science & Technology

    2011-01-13

    fuel ~gas and char /ash - The clean producer gas can be used ~n an internal combllstion engine •· P’ re-c~ommercia l system desi ~gned to conv~ert...w~oody biomass into ellectric ity and he,at - r\\~arkets include small industrial] agro- processing~ and rural ele~ctrirfiication •· ’’OFWEC" SBIR...designed for MSW, tires, food wastes, green biomass W t d� as e o s eam an power � 2nd Generation Design � Have 40 ton/day system permitted in

  11. Hadron Formation in DIS in a nuclear environment

    NASA Astrophysics Data System (ADS)

    Muccifora, Valeria

    2002-10-01

    The influence of the nuclear medium on the production of charged hadrons in semi-inclusive deep inelastic scattering has been studied by the HERMES experiment at DESY using 27.5 GeV positrons. A substantial reduction of the multiplicity of charged hadrons and identified charged pions from nuclei relative to that from deuterium has been measured as function of the relevant kinematic variables. The preliminary results on krypton show a larger reduction of the multiplicity ratio RMh with respect to the one previously measured on nitrogen and suggest a possible modification of the quark fragmentation process in the nuclear environment.

  12. Data acquisition system for the CALICE AHCAL calorimeter

    NASA Astrophysics Data System (ADS)

    Kvasnicka, J.

    2017-03-01

    The data acquisition system (DAQ) for a highly granular analogue hadron calorimeter (AHCAL) for the future International Linear Collider is presented. The developed DAQ chain has several stages of aggregation and scales up to 8 million channels foreseen for the AHCAL detector design. The largest aggregation device, Link Data Aggregator, has 96 HDMI connectors, four Kintex7 FPGAs and a central Zynq System-On-Chip. Architecture and performance results are shown in detail. Experience from DESY testbeams with a small detector prototype consisting of 15 detector layers are shown.

  13. A high-granularity plastic scintillator tile hadronic calorimeter with APD readout for a linear collider detector

    NASA Astrophysics Data System (ADS)

    Andreev, V.; Cvach, J.; Danilov, M.; Devitsin, E.; Dodonov, V.; Eigen, G.; Garutti, E.; Gilitzky, Yu.; Groll, M.; Heuer, R.-D.; Janata, M.; Kacl, I.; Korbel, V.; Kozlov, V.; Meyer, H.; Morgunov, V.; Němeček, S.; Pöschl, R.; Polák, I.; Raspereza, A.; Reiche, S.; Rusinov, V.; Sefkow, F.; Smirnov, P.; Terkulov, A.; Valkár, Š.; Weichert, J.; Zálešák, J.

    2006-08-01

    We report upon the performance of an analog hadron calorimeter prototype, where plastic scintillator tiles are read out with wavelength-shifting fibers coupled to avalanche photodiodes. This prototype configuration has been tested using a positron beam at DESY with energies between 1 and 6 GeV. We present different detector calibration methods, show measurements for noise, linearity, and energy resolution and discuss gain monitoring with an LED system. The results are in good agreement with our simulation studies and previous measurements using silicon photomultiplier readout.

  14. Applications of ambient mass spectrometry in high-throughput screening.

    PubMed

    Li, Li-Ping; Feng, Bao-Sheng; Yang, Jian-Wang; Chang, Cui-Lan; Bai, Yu; Liu, Hu-Wei

    2013-06-07

    The development of rapid screening and identification techniques is of great importance for drug discovery, doping control, forensic identification, food safety and quality control. Ambient mass spectrometry (AMS) allows rapid and direct analysis of various samples in open air with little sample preparation. Recently, its applications in high-throughput screening have been in rapid progress. During the past decade, various ambient ionization techniques have been developed and applied in high-throughput screening. This review discusses typical applications of AMS, including DESI (desorption electrospray ionization), DART (direct analysis in real time), EESI (extractive electrospray ionization), etc., in high-throughput screening (HTS).

  15. Diagnostic technique applied for FEL electron bunches

    NASA Astrophysics Data System (ADS)

    Brovko, O.; Grebentsov, A.; Morozov, N.; Syresin, E.; Yurkov, M.

    2016-05-01

    Diagnostic technique applied for FEL ultrashort electron bunches is developed at JINR-DESY collaboration within the framework of the FLASH and XFEL projects. Photon diagnostics are based on calorimetric measurements and detection of undulator radiation. The infrared undulator constructed at JINR and installed at FLASH is used for longitudinal bunch shape measurements and for two-color lasing provided by the FIR and VUV undulators. The pump probe experiments with VUV and FIR undulators provide the bunch profile measurements with resolution of several femtosecond. The new three microchannel plates (MCP) detectors operated in X-ray range are under development now in JINR for SASE1-SASE 3 European XFEL.

  16. The design and performance of 150-MW S-band klystrons

    SciTech Connect

    Sprehn, D.; Phillips, R.M.; Caryotakis, G.

    1994-09-01

    As part of an international collaboration, the Stanford Linear Accelerator Center (SLAC) klystron group has designed, fabricated and tested a 60 Hz, 3 {mu}s, 150 MW klystron built for Deutsches Elektronen Synchrotron (DESY). A test diode with a 535 kV, 700 A electron beam was constructed to verify the gun operation. The first klystron was built and successfully met design specifications. This paper discusses design issues and experimental results of the diode and klystron including the suppression of gun oscillations.

  17. Ultrafast Coherent Diffraction Imaging with X-ray Free-Electron Lasers

    SciTech Connect

    Chapman, H N; Bajt, S; Barty, A; Benner, W; Bogan, M; Frank, M; Hau-Riege, S; London, R; Marchesini, S; Spiller, E; Szoke, A; Woods, B; Boutet, S; Hodgson, K; Hajdu, J; Bergh, M; Burmeister, F; Caleman, C; Huldt, G; Maia, F; Seibert, M M; der Spoel, D v

    2006-08-22

    The ultrafast pulses from X-ray free-electron lasers will enable imaging of non-periodic objects at near-atomic resolution [1, Neutze]. These objects could include single molecules, protein complexes, or virus particles. The specimen would be completely destroyed by the pulse in a Coulomb explosion, but that destruction will only happen after the pulse. The scattering from the sample will give structural information about the undamaged object. There are many technical challenges that must be addressed before carrying out such experiments at an XFEL, which we are doing so with experiments at FLASH, the soft-X-ray FEL at DESY.

  18. Imprint Desorption Electrospray Ionization Mass Spectrometry Imaging for Monitoring Secondary Metabolites Production during Antagonistic Interaction of Fungi.

    PubMed

    Tata, Alessandra; Perez, Consuelo; Campos, Michel L; Bayfield, Mark A; Eberlin, Marcos N; Ifa, Demian R

    2015-12-15

    Direct analysis of microbial cocultures grown on agar media by desorption electrospray ionization mass spectrometry (DESI-MS) is quite challenging. Due to the high gas pressure upon impact with the surface, the desorption mechanism does not allow direct imaging of soft or irregular surfaces. The divots in the agar, created by the high-pressure gas and spray, dramatically change the geometry of the system decreasing the intensity of the signal. In order to overcome this limitation, an imprinting step, in which the chemicals are initially transferred to flat hard surfaces, was coupled to DESI-MS and applied for the first time to fungal cocultures. Note that fungal cocultures are often disadvantageous in direct imaging mass spectrometry. Agar plates of fungi present a complex topography due to the simultaneous presence of dynamic mycelia and spores. One of the most devastating diseases of cocoa trees is caused by fungal phytopathogen Moniliophthora roreri. Strategies for pest management include the application of endophytic fungi, such as Trichoderma harzianum, that act as biocontrol agents by antagonizing M. roreri. However, the complex chemical communication underlying the basis for this phytopathogen-dependent biocontrol is still unknown. In this study, we investigated the metabolic exchange that takes place during the antagonistic interaction between M. roreri and T. harzianum. Using imprint-DESI-MS imaging we annotated the secondary metabolites released when T. harzianum and M. roreri were cultured in isolation and compared these to those produced after 3 weeks of coculture. We identified and localized four phytopathogen-dependent secondary metabolites, including T39 butenolide, harzianolide, and sorbicillinol. In order to verify the reliability of the imprint-DESI-MS imaging data and evaluate the capability of tape imprints to extract fungal metabolites while maintaining their localization, six representative plugs along the entire M. roreri/T. harzianum

  19. Introductory Handbook for Small Arms Ammunition

    DTIC Science & Technology

    1967-07-01

    pec ific desi n . The f ollowing are examples of s tandard no- menclatur e : Item Cartridge Cartri d e Cartridge MM or Caliber 7. 62mm , NATO 5 ... 56mm Caliber . 30 6 . CARTRIDGE CASE Ball Ball Ball Model M80 Ml 93 M2 The cartridge case holds the primer, propellant 3 Sl’CTION II...CARTRIDGE IDENTIFICATION Figures 5 , 6, 7, 8, 9, 10 and 11 illustrate the various types of 7.62mm, 5.56mm, caliber .30, caliber .30 carbine

  20. FPGA based implementation of hardware diagnostic layer for local trigger of BAC calorimeter for ZEUS detector

    NASA Astrophysics Data System (ADS)

    Pozniak, Krzysztof T.

    2004-07-01

    The paper describes design and construction of hardware diagnostics layer dedicated to the local trigger of the Backing Calorimeter (BAC). The BAC is a part of the ZEUS experiment in DESY, Hamburg. A general characteristic of the hardware of BAC trigger was presented. The design of hardware diagnostic and calibration sub-systems for BAC trigger bases on the continuous monitoring of consecutive electronic and photonic blocks. The monitoring process is performed via the specialized tests. The standardized diagnostic components were realized in the algorithmic and parameterized description in AHDL. There were presented the implementation results in ALTERA ACEX chips.

  1. Spray desorption collection: an alternative to swabbing for pharmaceutical cleaning validation.

    PubMed

    Jain, Shashank; Heiser, Amy; Venter, Andre R

    2011-04-07

    Spray Desorption Collection (SDC) allows for much larger areas of surfaces to be sampled compared to traditional swabbing techniques, providing a valuable pre-concentration advantage. Closely related to desorption electrospray ionization (DESI), analytes from the sample surface are collected onto a selected collection surface, which in a second step can be analyzed directly. Here we demonstrate the application of SDC as a large surface area sampling tool coupled with paper spray MS (PS-MS) and demonstrate its capabilities for cleaning validation of pharmaceutical equipment for both acidic and basic active ingredients from an aluminium surface.

  2. Pion in deep inelastic scattering

    SciTech Connect

    Povh, B.

    2008-10-13

    The forward neutron production in the ep collisions at 300 GeV measured by the H1 and ZEUS Collaborations at DESY has been used to estimate the total probability for the proton fluctuation into n{pi}{sup +} and p{pi}{sup 0}. The probability found is on the order of the 30%. This number is compared with the numbers of obtained for the probability of quark fluctuation into {pi}{sup +} from several alternative DIS processes (Gottfried sum rule, polarized structure function) and the axial-vector coupling constant, where the pion fluctuation is believed to play an important role.

  3. Diffractive hadroproduction of W{sup {+-}} and Z{sup 0} bosons at high energies

    SciTech Connect

    Ducati, M. B. Gay; Machado, M. M.; Machado, M. V. T.

    2008-10-13

    An analysis of W{sup {+-}} and Z{sup 0} hard diffractive hadroproduction at high energies is presented obtained using the simple assumption of Regge factorization and considering the recent diffractive parton density functions extracted by the H1 Collaboration at DESY-HERA. The corresponding multiple Pomeron exchange corrections to the single Pomeron one is considered by taking into account by a gap survival probability factor. It is shown that the ratio of diffractive to nondiffractive boson production is in good agreement with the Tevatron data. Estimations which are relevant for the incoming measurements at the LHC are discussed.

  4. PWA prospects for K+Λ and K+Σ0 photoproduction

    NASA Astrophysics Data System (ADS)

    Dey, Biplab; McCracken, Michael E.; Meyer, Curtis A.

    2012-04-01

    We present a status update on the CMU group PWA efforts in the strangeness (K+Λ/K+Σ0) sector. The bulk of the currently available data comes from recently published CLAS g11a results [1, 2], with extensive polarization data expected soon from the CLAS g8 and g9 set of experiments. We give a brief description of issues pertaining to different sign conventions for the polarization observables in the literature [3], and normalization discrepancies between the CLAS-g11a results and older high energy data from SLAC/CEA/DESY that used an untagged photon beam.

  5. Longitudinal Diagnostics of Short Bunches at FLASH

    SciTech Connect

    Khan, Shaukat

    2009-01-22

    Novel acceleration concepts such as laser- or beam-driven plasma acceleration require advanced diagnostic techniques to characterize and monitor the beam. A particular challenge is to measure bunch lengths of the order of 10 femtoseconds. Several methods are currently explored at the free-electron laser FLASH at DESY/Hamburg and will be discussed it this paper, such as electro-optical sampling, streaking bunches with a transversely deflecting cavity, and -most recently implemented at FLASH--the optical-replica synthesizer, a laser-based technique promising a time resolution of a few femtoseconds.

  6. Pancreatic Cancer Surgical Resection Margins: Molecular Assessment by Mass Spectrometry Imaging

    PubMed Central

    Eberlin, Livia S.; Zare, Richard N.; Tibshirani, Robert; Longacre, Teri A.; Jalali, Moe; Norton, Jeffrey A.; Poultsides, George A.

    2016-01-01

    Background Surgical resection with microscopically negative margins remains the main curative option for pancreatic cancer; however, in practice intraoperative delineation of resection margins is challenging. Ambient mass spectrometry imaging has emerged as a powerful technique for chemical imaging and real-time diagnosis of tissue samples. We applied an approach combining desorption electrospray ionization mass spectrometry imaging (DESI-MSI) with the least absolute shrinkage and selection operator (Lasso) statistical method to diagnose pancreatic tissue sections and prospectively evaluate surgical resection margins from pancreatic cancer surgery. Methods and Findings Our methodology was developed and tested using 63 banked pancreatic cancer samples and 65 samples (tumor and specimen margins) collected prospectively during 32 pancreatectomies from February 27, 2013, to January 16, 2015. In total, mass spectra for 254,235 individual pixels were evaluated. When cross-validation was employed in the training set of samples, 98.1% agreement with histopathology was obtained. Using an independent set of samples, 98.6% agreement was achieved. We used a statistical approach to evaluate 177,727 mass spectra from samples with complex, mixed histology, achieving an agreement of 81%. The developed method showed agreement with frozen section evaluation of specimen margins in 24 of 32 surgical cases prospectively evaluated. In the remaining eight patients, margins were found to be positive by DESI-MSI/Lasso, but negative by frozen section analysis. The median overall survival after resection was only 10 mo for these eight patients as opposed to 26 mo for patients with negative margins by both techniques. This observation suggests that our method (as opposed to the standard method to date) was able to detect tumor involvement at the margin in patients who developed early recurrence. Nonetheless, a larger cohort of samples is needed to validate the findings described in this study

  7. Status of 3.9 GHz superconducting RF cavity technology at Fermilab

    SciTech Connect

    Harms, E.; Arkan, T.; Bellantoni, L.; Carter, H.; Edwards, H.; Foley, M.; Khabiboulline, T.; Mitchell, D.; Olis, D.; Rowe, A.; Solyak, N.; /Fermilab

    2007-06-01

    Fermilab is involved in an effort to assemble 3.9 GHz superconducting RF cavities into a four cavity cryomodule for use at the DESY TTF/FLASH facility as a third harmonic structure. The design gradient of the cavities is 14 MV/m. This effort involves design, fabrication, intermediate testing, assembly, and eventual delivery of the cryomodule. We report on all facets of this enterprise from design through future plans. Included will be test results of single 9-cell cavities, lessons learned, and current status.

  8. Vertical and horizontal test results of 3.9-GHz accelerating cavities at FNAL

    SciTech Connect

    Khabiboulline, T.; Edwards, H.; Foley, M.; Harms, E.; Hocker, James Andrew; Mitchell, D.; Rowe, A.; Solyak, N.; /Fermilab

    2008-06-01

    The 3rd harmonic 3.9GHz accelerating cavity was proposed to improve the beam performance of the VUV FEL, FLASH. In the frame of a collaborative agreement, Fermilab will provide DESY with a cryomodule containing a string of four cavities. Seven 9-cell Nb cavities were tested and six of them did reach accelerating gradient up to 24 MV/m almost twice more than design value of 14 MV/m. Two of these cavities are with new HOM couplers with improved design. In this paper we present all results of the vertical and horizontal tests.

  9. Cavity Preparation/assembly Techniques and Impact on Q, Realistic Q - Factors in a Module, Review of Modules

    SciTech Connect

    Peter Kneisel

    2005-03-19

    This contribution summarizes the surface preparation procedures for niobium cavities presently used both in laboratory experiments and for modules, such as buffered chemical polishing (BCP), electropolishing (EP), high pressure ultrapure water rinsing (HPR), CO{sub 2} snow cleaning and high temperature heat treatments for hydrogen degassing or postpurification. The impact of surface treatments and the degree of cleanliness during assembly procedures on cavity performance (Q - value and accelerating gradient E{sub acc}) will be discussed. In addition, an attempt will be made to summarize the experiences made in module assemblies in different labs/projects such as DESY(TTF), Jlab (Upgrade) and SNS.

  10. Comparison of buffered chemical polished and electropolished 3.9 GHz cavities

    SciTech Connect

    Edwards, Helen; Cooper, Charlie A.; Ge, Mingqi; Gonin, Ivan V.; Harms, Elvin R.; Khabiboulline, Timergali N.; Solyak, Nikolay; /Fermilab

    2009-10-01

    Five 3.9 GHz 9 cell cavities have been measured for the DESY FLASH module. These cavities were BCP processed and reached gradients of typically about 25 MV/m with Q drop starting at about 20 MV/m. Recently a few one cell cavities have been processed with EP and at least one has tested to a gradient of 30 MV/m with Q drop starting at about 25 MV/m. We will compare the results and give an update to the thermal analysis in relation to global thermal breakdown at 3.9 GHz.

  11. Current experiments in elementary particle physics. Revision 1-85

    SciTech Connect

    Wohl, C.G.; Armstrong, F.E.; Rittenberg, A.; Trippe, T.G.; Yost, G.P.; Oyanagi, Y.; Dodder, D.C.; Grudtsin, S.N.; Ryabov, Yu.G.; Frosch, R.

    1985-01-01

    This report contains summaries of 551 approved experiments in elementary particle physics (experiments that finished taking data before 1 January 1980 are excluded). Included are experiments at Brookhaven, CERN, CESR, DESY, Fermilab, Moscow Institute of Theoretical and Experimental Physics, Tokyo Institute of Nuclear Studies, KEK, LAMPF, Leningrad Nuclear Physics Institute, Saclay, Serpukhov, SIN, SLAC, and TRIUMF, and also experiments on proton decay. Properties of the fixed-target beams at most of the laboratories are summarized. Instructions are given for searching online the computer database (maintained under the SLAC/SPIRES system) that contains the summaries.

  12. COMPILATION OF CURRENT HIGH ENERGY PHYSICS EXPERIMENTS

    SciTech Connect

    Wohl, C.G.; Kelly, R.L.; Armstrong, F.E.; Horne, C.P.; Hutchinson, M.S.; Rittenberg, A.; Trippe, T.G.; Yost, G.P.; Addis, L.; Ward, C.E.W.; Baggett, N.; Goldschmidt-Clermong, Y.; Joos, P.; Gelfand, N.; Oyanagi, Y.; Grudtsin, S.N.; Ryabov, Yu.G.

    1981-05-01

    This is the fourth edition of our compilation of current high energy physics experiments. It is a collaborative effort of the Berkeley Particle Data Group, the SLAC library, and nine participating laboratories: Argonne (ANL), Brookhaven (BNL), CERN, DESY, Fermilab (FNAL), the Institute for Nuclear Study, Tokyo (INS), KEK, Serpukhov (SERP), and SLAC. The compilation includes summaries of all high energy physics experiments at the above laboratories that (1) were approved (and not subsequently withdrawn) before about April 1981, and (2) had not completed taking of data by 1 January 1977. We emphasize that only approved experiments are included.

  13. Electromagnetic simulations of coaxial type HOM coupler

    SciTech Connect

    Genfa Wu; Haipeng Wang; Robert Rimmer; Charles Reece

    2005-07-10

    DESY-type coaxial high order mode (HOM) coupler was used in many superconducting cavities. The electric probe tip is located at the maximum B-field inside the coupler can. For continuous wave (CW) high current application, the heating of this tip can be severe to degrade the cavity performance. Electromagnetic (EM) simulation was done to estimate the tip heating. The geometric remedies and detuning effect were discussed. The effect to HOM external quality factor (Qext) was also estimated due to these remedies. The HOM probe tip heating power was provided for CEBAF 12-GeV cavities and AES injector cavities.

  14. Gain length dependence on phase shake in the VUV-FEL at the TESLA Test Facility

    SciTech Connect

    Pflueger, J.; Pierini, P.

    1995-12-31

    The TTF VUV FEL, which is in its design stage at DESY, consists of a 30 m long SASE FEL which will radiate around 6 nm, driven by a superconducting linac with final energy of 1 GeV. One of the important issues in its design is the undulator performance, which is studied in this paper. The present setup, including FODO lattice, is discussed in this paper. Results of simulations, including the realistic wiggler field errors and beam stearing, are presented. Dependence of the performance, in particular the gain and saturation length as well as the saturation peak power, on the wiggler field errors is discussed.

  15. Analysis and modification of surfaces using molecular ions in the ambient environment.

    PubMed

    Espy, Ryan D; Badu-Tawiah, Abraham; Cooks, R Graham

    2011-10-01

    The analysis and modification of surfaces in their native conditions can be performed using new mass spectrometric methods. Ambient ionization sources, including desorption electrospray ionization (DESI), have been implemented for the rapid analysis of unmodified biological surfaces including whole plant material, tissue sections, algae, and bacterial colonies. Recent advances have shown promise for in vivo and high-throughput clinical analysis. Additionally, the recent development of ambient ion soft landing (SL) allows polyatomic ions to be deposited onto surfaces in open air. Ambient SL offers speed, control, and flexibility for surface reactions and modification.

  16. The ratio of the beauty structure functions Rb=FLb/F2b at low x

    NASA Astrophysics Data System (ADS)

    Boroun, G. R.

    2014-07-01

    We study the structure functions Fkb(x,Q2) (k=2,L) and the reduced cross section σrb(x,Q2) for small values of Bjorken's x variable with respect to the hard (Lipatov) pomeron for the gluon distribution and provide a compact formula for the ratio Rb that is useful to extract the beauty structure function from the beauty reduced cross section, in particular at DESY HERA. Also we show that the effects of the nonlinear corrections to the gluon distribution tame the behavior of the beauty structure function and the beauty reduced cross section at low x.

  17. Heavy quark photoproduction in coherent interactions at high energies

    NASA Astrophysics Data System (ADS)

    Gonçalves, V. P.; Machado, M. V. T.; Meneses, A. R.

    2009-08-01

    We calculate the inclusive and diffractive photoproduction of heavy quarks in proton-proton collisions at Tevatron and CERN LHC energies, where the photon reaches energies larger than those ones accessible at DESY-HERA. The integrated cross section and the rapidity distributions for charm and bottom production are computed within the color dipole picture employing three phenomenological saturation models based on the color glass condensate formalism. Our results demonstrate that the experimental analyses of these reactions are feasible and that the cross sections are sensitive to the underlying parton dynamics.

  18. Feasibility of a ring FEL at low emittance storage rings

    NASA Astrophysics Data System (ADS)

    Agapov, I.

    2015-09-01

    A scheme for generating coherent radiation at latest generation low emittance storage rings such as PETRA III at DESY (Balewski et al., 2004 [1]) is proposed. The scheme is based on focusing and subsequent defocusing of the electron beam in the longitudinal phase space at the undulator location. The expected performance characteristics are estimated for radiation in the wavelength range of 500-1500 eV. It is shown that the average brightness is increased by several orders of magnitude compared to spontaneous undulator radiation, which can open new perspectives for photon-hungry soft X-ray spectroscopy techniques.

  19. Current experiments in elementary particle physics

    SciTech Connect

    Wohl, C.G.; Armstrong, F.E.; Trippe, T.G.; Yost, G.P. ); Oyanagi, Y. ); Dodder, D.C. ); Ryabov, Yu.G.; Slabospitsky, S.R. . Inst. Fiziki Vysokikh Ehnergij); Frosch, R. (Swiss Inst. for Nuclear Research, Villigen (Switzerla

    1989-09-01

    This report contains summaries of 736 current and recent experiments in elementary particle physics (experiments that finished taking data before 1982 are excluded). Included are experiments at Brookhaven, CERN, CESR, DESY, Fermilab, Tokyo Institute of Nuclear Studies, Moscow Institute of Theoretical and Experimental Physics, Joint Institute for Nuclear Research (Dubna), KEK, LAMPF, Novosibirsk, PSI/SIN, Saclay, Serpukhov, SLAC, and TRIUMF, and also several underground experiments. Also given are instructions for searching online the computer database (maintained under the SLAC/SPIRES system) that contains the summaries. Properties of the fixed-target beams at most of the laboratories are summarized.

  20. Current experiments in elementary particle physics. Revised

    SciTech Connect

    Galic, H.; Wohl, C.G.; Armstrong, B.; Dodder, D.C.; Klyukhin, V.I.; Ryabov, Yu.G.; Illarionova, N.S.; Lehar, F.; Oyanagi, Y.; Olin, A.; Frosch, R.

    1992-06-01

    This report contains summaries of 584 current and recent experiments in elementary particle physics. Experiments that finished taking data before 1986 are excluded. Included are experiments at Brookhaven, CERN, CESR, DESY, Fermilab, Tokyo Institute of Nuclear Studies, Moscow Institute of Theoretical and Experimental Physics, KEK, LAMPF, Novosibirsk, Paul Scherrer Institut (PSI), Saclay, Serpukhov, SLAC, SSCL, and TRIUMF, and also several underground and underwater experiments. Instructions are given for remote searching of the computer database (maintained under the SLAC/SPIRES system) that contains the summaries.

  1. Current experiments in particle physics - particle data group

    SciTech Connect

    Galic, H.; Lehar, F.; Kettle, P.R.

    1996-09-01

    This report contains summaries of current and recent experiments in Particle Physics. Included are experiments at BEPC (Beijing), BNL, CEBAF, CERN, CESR, DESY, FNAL, Frascati, ITEP (Moscow), JINR (Dubna), KEK, LAMPF, Novosibirsk, PNPI (St. Petersburg), PSI, Saclay, Serpukhov, SLAC, and TRIUMF, and also several proton decay and solar neutrino experiments. Excluded are experiments that finished taking data before 1991. Instructions are given for the World Wide Web (WWW) searching of the computer database (maintained under the SLAC-SPIRES system) that contains the summaries.

  2. Neutron dosimetry with TL albedo dosemeters at high energy accelerators.

    PubMed

    Haninger, T; Fehrenbacher, G

    2007-01-01

    The GSF-Personal Monitoring Service uses the TLD albedo dosemeter as standard neutron personal dosemeter. Due to its low sensitivity for fast neutrons however, it is generally not recommended for workplaces at high-energy accelerators. Test measurements with the albedo dosemeter were performed at the accelerator laboratories of GSI in Darmstadt and DESY in Hamburg to reconsider this hypothesis. It revealed that the albedo dosemeter can also be used as personal dosemeter at these workplaces, because at all measurement locations a significant part of neutrons with lower energies could be found, which were produced by scattering at walls or the ground.

  3. Hard Exclusive Vector Meson Leptoproduction At HERMES

    SciTech Connect

    Golembiovskaya, M.

    2011-07-15

    The HERMES experiment at DESY, Hamburg collected a set of data on hard exclusive vector meson ({rho}{sup 0}{phi},{omega}) leptoproduction using the 27.6 GeV longitudinally polarized lepton beam of HERA accelerator and longitudinally or transversely polarized or unpolarized gas targets. Measurements of exclusive vector meson production provide access to the structure of the nucleon since the process can be described in terms of Generalized Parton Distributions (GPDs). An overview of the HERMES results on exclusive vector mesons production is presented.

  4. Small Portable Analyzer Diagnostic Equipment (SPADE) - Advance Development Prototype Report.

    DTIC Science & Technology

    1979-09-01

    47 gearboxes in test cells, gave promising results. These results showed. the potential for desiRninR an automated instru- ment that would be both...circuit design refinements and testing on the BTF in the laboratory, on a UH-l 42* gearbox in a test cell, on a UH-l aircraft at Scott AFB, and on both UH...when conservatively evaluated, indicate that for a 25 flight hour usage interval, the SPADE cumulative probability of fault detection is 941 and would

  5. PWA prospects for K+Lambda and K+Sigma^0 photoproduction

    SciTech Connect

    Biplab Dey, Michael E. McCracken, Curtis A. Meyer

    2012-04-01

    We present a status update on the CMU group PWA efforts in the strangeness (K{sup +}{Lambda}/K{sup +}{Sigma}{sup 0}) sector. The bulk of the currently available data comes from recently published CLAS g11a results, with extensive polarization data expected soon from the CLAS g8 and g9 set of experiments. We give a brief description of issues pertaining to different sign conventions for the polarization observables in the literature, and normalization discrepancies between the CLAS-g11a results and older high energy data from SLAC/CEA/DESY that used an untagged photon beam.

  6. USE OF ACOUSTIC EMISSION TO DIAGNOSE BREAKDOWN IN ACCELERATOR RF STRUCTURES

    SciTech Connect

    Nelson, Janice L.

    2003-05-12

    Accelerator structures of a wide variety have been damaged by RF breakdowns. Very little is known about the mechanisms that cause the breakdown and the damage although there has been theoretical work [1,2]. Using an array of ultrasonic acoustic emission sensors we have been able to locate and classify breakdown events more accurately than possible using microwave techniques. Data from the technique has led to improvements in the design of the NLC X-band RF structure. We report results of acoustic emission studies at the DESY TESLA Test Facility and the SLAC NLC Test Accelerator.

  7. Beam Beam Simulation Studies for NLC And SLC2000

    SciTech Connect

    Thompson, K.A.; Chen, P.; Irwin, J.; Zimmermann, F.; /SLAC

    2010-05-27

    We apply and modify the computer codes CAIN(P.Chen, G.Horton-Smith, T.Ohgaki, A.W.Weidemann, K.Yokoya, contributed to Workshop on Gamma-Gamma Colliders, Berkeley, CA, March 28-31, 1994; SLAC-PUB-6583.) and GUINEAPIG(D.Schulte (DESY), unpublished.) to make detailed studies of the beam-beam interaction in the SLAC design for a future linear collider (NLC), as well as to the proposed SLC2000 project. Using realistic beam distributions, we present simulations related to the tuning and optimization of luminosity in SLC2000 and NLC.

  8. The Fermilab data storage infrastructure

    SciTech Connect

    Jon A Bakken et al.

    2003-02-06

    Fermilab, in collaboration with the DESY laboratory in Hamburg, Germany, has created a petabyte scale data storage infrastructure to meet the requirements of experiments to store and access large data sets. The Fermilab data storage infrastructure consists of the following major storage and data transfer components: Enstore mass storage system, DCache distributed data cache, ftp and Grid ftp for primarily external data transfers. This infrastructure provides a data throughput sufficient for transferring data from experiments' data acquisition systems. It also allows access to data in the Grid framework.

  9. Design, Analysis and Implementation of the Primary Operation, RETRIEVE-COMMON, of the Multi-Backend Database System (MBDS).

    DTIC Science & Technology

    1985-06-01

    Hsiang -lung Tung 2 8 lane 46 Ming- Chuan Road Ctia-i CiLty Taiwan 600 Pepublic of 6hina tit 148 •, 1,,J., ., FILMED 4.~ 0-85 DTIC p.0 ...DATABASE SYSTEM (MBDS) by ~i. Hsiang -Lung Tung June 1985 Thesis Advisor: David K. Hsiao -’-" Approved for public release; distribution is unlimited P- A...Desi n. Analysis and Implementation of the grimazy operation Retriee-Coamon of the Rulti-BAckbnd Datafase System (MBDS by Hsiang -Lung Tung

  10. Observation of Femtosecond Bunch Length Using a Transverse Deflecting Structure

    SciTech Connect

    Huning, M.; Bolzmann, A.; Schlarb, H.; Frisch, J.; McCormick, D.; Ross, M.; Smith, T.; Rossbach, J.; /Hamburg U.

    2005-12-14

    The design of the VUV-FEL at DESY demands bunch lengths in the order of 50 fs and below. For the diagnostic of such very short bunches a transverse deflecting RF structure (LOLA) has been installed which streaks the beam according to the longitudinal distribution. Tests in the VUV-FEL yielded a rich substructure of the bunches. The most pronounced peak in the has a rms length of approximately 50 fs during FEL operation and below 20 fs FWHM at maximum compression. Depending on the transverse focusing a resolution well below 50 fs was achieved.

  11. A possible experiment at LEUTL to characterize surface roughness Wakefield effects

    SciTech Connect

    Biedron, S.G.; Dattoli, G.; Fawley, W.M.; Freund, H.P.; Huang, Zhirong; Lewellen, J.W.; Milton, S.V.; Nuhn, H.D.

    2001-01-10

    Wakefield effects due to internal vacuum chamber roughness may increase the electron beam energy spread and so have become an immediate concern for future x-ray free-electron laser (FEL) project developments such as the SLAC Linac Coherent Light Source (LCLS) and the DESY TESLA x-ray FEL. We describe a possible experiment to characterize the effects of surface roughness on an FEL driven by self-amplified spontaneous emission (SASE) operation. Although the specific system described is not completely identical to the above-proposed projects, much useful scaling information could be obtained and applied to shorter wavelength systems.

  12. Photoinjector drive laser of the FLASH FEL.

    PubMed

    Will, Ingo; Templin, Horst I; Schreiber, Siegfried; Sandner, Wolfgang

    2011-11-21

    The upgraded photoinjector drive laser of the free-electron laser facility FLASH at DESY Hamburg is described in this paper. This laser produces trains of 800 and 2400 ultraviolet picosecond pulses at 1 MHz and 3 MHz repetition rate in the trains, respectively. The amplifying elements of the system are Nd:YLF-rods, which are pumped by fiber-coupled semiconductor diodes. Compared to the flashlamp-pumped photocathode laser previously used at FLASH, the new diode-pumped laser features a better reliability and a significantly improved stability of its pulse parameters.

  13. FLASH Beam-Off RF Measurements and Analyses

    SciTech Connect

    Pei, Shilun; Adolphsen, Chris; Carwardine, John; /Argonne

    2009-03-31

    The FLASH L-band (1.3 GHz) superconducting accelerator facility at DESY has a Low Level RF (LLRF) system that is similar to that envisioned for ILC. This system has extensive monitoring capability and was used to gather performance data relevant to ILC. In particular, waveform data were recorded with beam off for three, 8-cavity cryomodules to evaluate the input rf stability, perturbations to the SC cavity frequencies and the rf overhead required to achieve constant gradient during the 800-s pulses. In this paper, we discuss the measurements and data analysis procedures and present key findings on the pulse-to-pulse input rf and cavity field stability.

  14. Nomogramme der Sickerwasserprognose

    NASA Astrophysics Data System (ADS)

    Schneider, Wilfried; Stöfen, Heinke

    Kurzfassung Modelle zur Sickerwasserprognose stehen in unterschiedlicher Komplexität zur Verfügung. Komplexe Modelle werden aufgrund der schwierigen Handhabung und des enormen Eingabedatenumfangs in der Praxis kaum angewandt. Grobe Abschätzmethoden sind dagegen nicht ausreichend wissenschaftlich fundiert, um damit justiziable Ergebnisse erzielen zu können. Um die Kluft zwischen komplexer und einfacher, jedoch justiziabler sowie wissenschaftlich fundierter Methode zu schmälern, wurden Nomogramme für Sickerwasserprognosen zur Berücksichtigung der Endlichkeit der Quelle entwickelt. Mithilfe der Nomogramme können ohne Modellierungserfahrung schnell und einfach die zu erwartenden Schadstoffkonzentrationen am Ort der Beurteilung abgeschätzt werden, falls die Endlichkeit der Quelle der hauptsächlich zur Abminderung führende Prozess ist. Die Nomogramme basieren auf analytischen Lösungen der eindimensionalen Advektions-Dispersions-Gleichung. Sie berücksichtigen die Prozesse Advektion, Diffusion in Bodenwasser und -luft, Dispersion, lineare Sorption, Abbau 1. Ordnung innerhalb einer aus mehreren Bodenschichten bestehenden Sickerwasserzone, wobei die Endlichkeit der Schadstoffmasse in der Bodenkontamination einbezogen wird. Die Genauigkeit der Nomogramme wird dargestellt. Models of different complexity are available for groundwater risk assessment. In practice complex models are hardly used, due to their difficult handling and large data requirement. Rough estimation methods are not sufficiently scientifically founded to produce justiciable results. To reduce the gap between complex and easy to use but justiciable and scientifically founded methods we developed nomograms for groundwater risk assessment which take into account the finite mass of contaminant in the source. With the help of the nomograms the expected concentrations at the point of compliance (transition between the unsaturated and saturated zone) can be estimated easily, fast and without any

  15. High-Speed Tandem Mass Spectrometric in Situ Imaging by Nanospray Desorption Electrospray Ionization Mass Spectrometry

    SciTech Connect

    Lanekoff, Ingela T.; Burnum-Johnson, Kristin E.; Thomas, Mathew; Short, Joshua TL; Carson, James P.; Cha, Jeeyeon; Dey, Sudhansu K.; Yang, Pengxiang; Prieto Conaway, Maria C.; Laskin, Julia

    2013-10-15

    Nanospray desorption electrospray ionization (nano-DESI) combined with tandem mass spectrometry (MS/MS), high-resolution mass analysis (m/m=17,500 at m/z 200), and rapid spectral acquisition enabled simultaneous imaging and identification of more than 300 molecules from 92 selected m/z windows (± 1 Da) with a spatial resolution of better than 150 um. Uterine sections of implantation sites on day 6 of pregnancy were analyzed in the ambient environment without any sample pre-treatment. MS/MS imaging was performed by scanning the sample under the nano-DESI probe at 10 um/s while acquiring higher-energy collision-induced dissociation (HCD) spectra for a targeted inclusion list of 92 m/z values at a rate of ~6.3 spectra/s. Molecular ions and their corresponding fragments, separated using high-resolution mass analysis, were assigned based on accurate mass measurement. Using this approach, we were able to identify and image both abundant and low-abundance isobaric species within each m/z window. MS/MS analysis enabled efficient separation and identification of isobaric sodium and potassium adducts of phospholipids. Furthermore, we identified several metabolites associated with early pregnancy and obtained the first 2D images of these molecules.

  16. Any Light Particle Search (ALPS)

    NASA Astrophysics Data System (ADS)

    Spector, Aaron; Any Light Particle Search (ALPS) Collaboration

    2016-03-01

    High power laser fields enabled by technologies developed for ground-based gravitational-wave observatories open up new opportunities for fundamental physics studies. One of these options is the search for axions and axion-like particles in a pure laboratory experiment. The axion is a solution to the strong CP-problem and a potential dark matter candidate. The axion has also been proposed as an additional channel to cool stars as well as a potential explanation for the TeV transparency problem. The German-US ALPS collaboration is setting up a light-shining-through-walls (LSW) experiment at DESY. LSW experiments are based on the simple idea that a high power laser field traversing a static magnetic field will transform partly into a relativistic axion field. This axion field will travel through an opaque wall into a second static magnetic field region where it turns partly back into an electromagnetic wave field with the same frequency as the laser. The ALPS collaboration is working towards a large scale LSW experiment at DESY in Hamburg, Germany. I will report on the status of the ALPS experiment. This work is supported by the Deutsche Forschungsgemeinschaft, PRISMA, the Helmholtz Association, the National Science Foundation and the Heising-Simons Foundation.

  17. Personal Information from Latent Fingerprints Using Desorption Electrospray Ionization Mass Spectrometry and Machine Learning.

    PubMed

    Zhou, Zhenpeng; Zare, Richard N

    2017-01-17

    Desorption electrospray ionization-mass spectrometry imaging (DESI-MSI) was applied to latent fingerprints to obtain not only spatial patterns but also chemical maps. Samples with similar lipid compositions as those of the fingerprints were collected by swiping a glass slide across the forehead of consenting adults. A machine learning model called gradient boosting tree ensemble (GDBT) was applied to the samples that allowed us to distinguish between different genders, ethnicities, and ages (within 10 years). The results from 194 samples showed accuracies of 89.2%, 82.4%, and 84.3%, respectively. Specific chemical species that were determined by the feature selection of GDBT were identified by tandem mass spectrometry. As a proof-of-concept, the machine learning model trained on the sample data was applied to overlaid latent fingerprints from different individuals, giving accurate gender and ethnicity information from those fingerprints. The results suggest that DESI-MSI imaging of fingerprints with GDBT analysis might offer a significant advance in forensic science.

  18. Future structural biology applications with a free-electron laser - more than wild dreams?

    PubMed

    Wilmanns, M

    2000-01-01

    A workshop entitled Potential Future Applications in Structural Biology of an X-ray Free-Electron Laser at DESY was held at Hamburg, Germany, on 4-8 July 1999. The aim of the workshop was to identify and discuss potential applications in structural biology using the specific beam properties of the planned X-ray free-electron laser at DESY, Hamburg. The workshop focused on proposals in X-ray crystallography, spectroscopy, microscopy and holography. In the discussions during the workshop, the response of biological material to the expected high photon flux and its time dependence played a central role. Technological aspects in data recording and image interpretation were covered as well. There was general agreement that an X-ray free-electron laser source with its specific source parameters could offer unique opportunities for novel experiments in structural biology, complementing current synchrotron facilities. The realization of future applications will be challenged by the handling of large high-energy doses on the biological specimen and the development of equipment capable to respond to a pulse time structure in the femtosecond range.

  19. Effects of Tailored Surface Chemistry on Desorption Electrospray Ionization Mass Spectrometry: a Surface-Analytical Study by XPS and AFM

    NASA Astrophysics Data System (ADS)

    Penna, Andrea; Careri, Maria; Spencer, Nicholas D.; Rossi, Antonella

    2015-08-01

    Since it was proposed for the first time, desorption electrospray ionization-mass spectrometry (DESI-MS) has been evaluated for applicability in numerous areas. Elucidations of the ionization mechanisms and the subsequent formation of isolated gas-phase ions have been proposed so far. In this context, the role of both surface and pneumatic effects on ion-formation yield has recently been investigated. Nevertheless, the effect of the surface chemistry has not yet been completely understood. Functionalized glass surfaces have been prepared, in order to tailor surface performance for ion formation. Three substrates were functionalized by depositing three different silanes [3-mercaptopropyltriethoxysilane (MTES), octyltriethoxysilane (OTES), and 1H,1H,2H,2H-perfluorooctyltriethoxy-silane (FOTES)] from toluene solution onto standard glass slides. Surface characterization was carried out by contact-angle measurements, tapping-mode atomic force microscopy, and X-ray photoelectron spectroscopy. Morphologically homogeneous and thickness-controlled films in the nm range were obtained, with surface free energies lying between 15 and 70 mJ/m2. These results are discussed, together with those of DESI-MS on low-molecular-weight compounds such as melamine, tetracycline, and lincomycin, also taking into account the effects of the sprayer potential and its correlation with surface wettability. The results demonstrate that ion-formation efficiency is affected by surface wettability, and this was demonstrated operating above and below the onset of the electrospray.

  20. An Automated Platform for High-Resolution Tissue Imaging Using Nanospray Desorption Electrospray Ionization Mass Spectrometry

    SciTech Connect

    Lanekoff, Ingela T.; Heath, Brandi S.; Liyu, Andrey V.; Thomas, Mathew; Carson, James P.; Laskin, Julia

    2012-10-02

    An automated platform has been developed for acquisition and visualization of mass spectrometry imaging (MSI) data using nanospray desorption electrospray ionization (nano-DESI). The new system enables robust operation of the nano-DESI imaging source over many hours. This is achieved by controlling the distance between the sample and the probe by mounting the sample holder onto an automated XYZ stage and defining the tilt of the sample plane. This approach is useful for imaging of relatively flat samples such as thin tissue sections. Custom software called MSI QuickView was developed for visualization of large data sets generated in imaging experiments. MSI QuickView enables fast visualization of the imaging data during data acquisition and detailed processing after the entire image is acquired. The performance of the system is demonstrated by imaging rat brain tissue sections. High resolution mass analysis combined with MS/MS experiments enabled identification of lipids and metabolites in the tissue section. In addition, high dynamic range and sensitivity of the technique allowed us to generate ion images of low-abundance isobaric lipids. High-spatial resolution image acquired over a small region of the tissue section revealed the spatial distribution of an abundant brain metabolite, creatine, in the white and gray matter that is consistent with the literature data obtained using magnetic resonance spectroscopy.

  1. Measuring the Dark Energy Driven Expansion of the Universe at Redshift~1

    NASA Astrophysics Data System (ADS)

    Kueter-Young, Andrea; Moustakas, John

    2016-03-01

    In 1998 astronomers made the remarkable discovery that the universe is expanding at an ever-faster rate due to an unknown force or energy field now known as ``dark energy.'' The Dark Energy Spectroscopic Instrument (DESI) survey will measure the accelerating expansion of the universe with unprecedented precision, yielding crucial insights into the physical nature of dark energy. In order to effectively carry out this measurement, however, DESI needs to efficiently select five distinct classes of distant objects from ground-based imaging surveys containing millions of unimportant, interloping extragalactic sources. Focusing on one specific class of objects--star-forming emission-line galaxies--we investigate a variety of Machine Learning algorithms in order to determine which method optimally selects emission-line galaxies. We apply these algorithms to spectroscopic test datasets from the Sloan Digital Sky Survey and the DEEP2 galaxy redshift survey, and use cross-validation to test the effectiveness of each method. We find that the Machine Learning algorithms considered yield a negligible improvement over the traditional, simple method of using color-color cuts to select emission-line galaxies.

  2. Production of quasi ellipsoidal laser pulses for next generation high brightness photoinjectors

    NASA Astrophysics Data System (ADS)

    Rublack, T.; Good, J.; Khojoyan, M.; Krasilnikov, M.; Stephan, F.; Hartl, I.; Schreiber, S.; Andrianov, A.; Gacheva, E.; Khazanov, E.; Mironov, S.; Potemkin, A.; Zelenogorskii, V. V.; Syresin, E.

    2016-09-01

    The use of high brightness electron beams in Free Electron Laser (FEL) applications is of increasing importance. One of the most promising methods to generate such beams is the usage of shaped photocathode laser pulses. It has already demonstrated that temporal and transverse flat-top laser pulses can produce very low emittance beams [1]. Nevertheless, based on beam simulations further improvements can be achieved using quasi-ellipsoidal laser pulses, e.g. 30% reduction in transverse projected emittance at 1 nC bunch charge. In a collaboration between DESY, the Institute of Applied Physics of the Russian Academy of Science (IAP RAS) in Nizhny Novgorod and the Joint Institute of Nuclear Research (JINR) in Dubna such a laser system capable of producing trains of laser pulses with a quasi-ellipsoidal distribution, has been developed. The prototype of the system was installed at the Photo Injector Test facility at DESY in Zeuthen (PITZ) and is currently in the commissioning phase. In the following, the laser system will be introduced, the procedure of pulse shaping will be described and the last experimental results will be shown.

  3. Using short helically wrapped single-mode fibers as illuminated fiducials

    NASA Astrophysics Data System (ADS)

    Ishikawa, Yuzo; Edelstein, Jerry; Silber, Joseph H.; Poppett, Claire

    2016-09-01

    The Dark Energy Spectroscopic Instrument (DESI) is a Stage IV ground-based dark energy experiment to map the large-scale structure of the universe and to probe the nature of dark energy. DESI is a massively multiplexed fiber-fed spectrograph, using a 5000-ffber-positioner focal plane assembly to image millions of galaxies. Since these fiber positioners must be positioned to 10-um accuracy, the focal plane must be mapped to micron level precision. We intend to use illuminated fiducials as point sources to accurately calibrate the focal plane surface. In this study we explored using short single-mode fibers as illuminated fiducials. However, despite the advantages of using single-mode fibers, as a near point source, optical fibers have length-dependence behavior: as shorter tend to guide core light into the cladding, which is not ideal for fiducial centroid-measurements. In this paper, we demonstrate that adding tight helical bends to the fibers eliminates unwanted flux in the cladding, improving centroid measurements by more than 50%. This technique has proven with fibers as short as 2-inches, obtaining centroid with at least 0.5-micron precision. This experiment eliminates fiber-length dependence, thus proving the viability of using short single-mode fibers as illuminated fiducials or similar applications

  4. Droplet dynamics and ionization mechanisms in desorption electrospray ionization mass spectrometry.

    PubMed

    Venter, Andre; Sojka, Paul E; Cooks, R Graham

    2006-12-15

    A droplet pickup and other mechanisms have been suggested for the ionization of biomolecules like peptides and proteins by desorption electrospray ionization. To verify this hypothesis phase Doppler particle analysis was used to study the sizes and velocities of droplets involved in DESI. It was found that impacting droplets typically have velocities of 120 m/s and average diameters of 2-4 microm. Small differences in sprayer construction influence the operating conditions at which droplets of these dimensions are produced. Under these conditions, the kinetic energy per impacting water molecule is less than 0.6 meV and sputtering through momentum transfer during collisions or ionization by other electronic processes is unlikely. Droplets arrive at the surface with velocities well below the speed of sound in common materials, thereby excluding the possibility of ionization by shockwave formation. Some droplets appear to roll along the surface, increasing contact time and presumably the amount of material that is taken up into droplets during conditions typical of the DESI experiment.

  5. Nucleolin-aptamer therapy in retinoblastoma: molecular changes and mass spectrometry–based imaging

    PubMed Central

    Subramanian, Nithya; Srimany, Amitava; Kanwar, Jagat R; Kanwar, Rupinder K; Akilandeswari, Balachandran; Rishi, Pukhraj; Khetan, Vikas; Vasudevan, Madavan; Pradeep, Thalappil; Krishnakumar, Subramanian

    2016-01-01

    Retinoblastoma (RB) is an intraocular childhood tumor which, if left untreated, leads to blindness and mortality. Nucleolin (NCL) protein which is differentially expressed on the tumor cell surface, binds ligands and regulates carcinogenesis and angiogenesis. We found that NCL is over expressed in RB tumor tissues and cell lines compared to normal retina. We studied the effect of nucleolin-aptamer (NCL-APT) to reduce proliferation in RB tumor cells. Aptamer treatment on the RB cell lines (Y79 and WERI-Rb1) led to significant inhibition of cell proliferation. Locked nucleic acid (LNA) modified NCL-APT administered subcutaneously (s.c.) near tumor or intraperitoneally (i.p.) in Y79 xenografted nude mice resulted in 26 and 65% of tumor growth inhibition, respectively. Downregulation of inhibitor of apoptosis proteins, tumor miRNA-18a, altered serum cytokines, and serum miRNA-18a levels were observed upon NCL-APT treatment. Desorption electrospray ionization mass spectrometry (DESI MS)-based imaging of cell lines and tumor tissues revealed changes in phosphatidylcholines levels upon treatment. Thus, our study provides proof of concept illustrating NCL-APT-based targeted therapeutic strategy and use of DESI MS-based lipid imaging in monitoring therapeutic responses in RB. PMID:27574784

  6. Fault-tolerant VHDL descriptions: a case study for SEU-tolerant digital library

    NASA Astrophysics Data System (ADS)

    Tomczak, M.; Swiercz, B.; Napieralski, A.

    2006-10-01

    This paper presents a new cost-effective method of designing Single Event Upset (SEU)-tolerant digital systems based on Commercial-Off-The-Shelf (COTS) Field-Programmable-Gate-Array (FPGA) devices. The project was carried out in cooperation of Technical University of Lodz (TUL) with Deutsches Elektronen-Synchrotron (DESY). DESY is a high-energy particle physics research centre, located in Hamburg, Germany, and has been chosen as a home site for a new generation particle collider - X-Ray Free Electron Laser (X-FEL) accelerator. A need of implementing digital control systems inside accelerators main tunnel, brought a new hardware approach to low-cost design reliable compex circuits with respect to Single Event Effects (SEEs). The goal was to develop a high performance method without modifications in the FPGA architecture and without high area penalties. A SEU-tolerant, digital library has been created. From basic gates, through combinational and sequential cells to some more sophisticated units like memory blocks, code converters or arithmetical functions cells, in all elements upset detection and mitigation schemes have been implemented. The library was described in Very High Speed Integrated Circuit Hardware Description Language (VHDL).

  7. Rapid Detection of Necrosis in Breast Cancer with Desorption Electrospray Ionization Mass Spectrometry

    PubMed Central

    Tata, Alessandra; Woolman, Michael; Ventura, Manuela; Bernards, Nicholas; Ganguly, Milan; Gribble, Adam; Shrestha, Bindesh; Bluemke, Emma; Ginsberg, Howard J.; Vitkin, Alex; Zheng, Jinzi; Zarrine-Afsar, Arash

    2016-01-01

    Identification of necrosis in tumors is of prognostic value in treatment planning, as necrosis is associated with aggressive forms of cancer and unfavourable outcomes. To facilitate rapid detection of necrosis with Mass Spectrometry (MS), we report the lipid MS profile of necrotic breast cancer with Desorption Electrospray Ionization Mass Spectrometry (DESI-MS) imaging validated with statistical analysis and correlating pathology. This MS profile is characterized by (1) the presence of the ion of m/z 572.48 [Cer(d34:1) + Cl]− which is a ceramide absent from the viable cancer subregions; (2) the absence of the ion of m/z 391.25 which is present in small abundance only in viable cancer subregions; and (3) a slight increase in the relative intensity of known breast cancer biomarker ions of m/z 281.25 [FA(18:1)-H]− and 303.23 [FA(20:4)-H]−. Necrosis is accompanied by alterations in the tissue optical depolarization rate, allowing tissue polarimetry to guide DESI-MS analysis for rapid MS profiling or targeted MS imaging. This workflow, in combination with the MS profile of necrosis, may permit rapid characterization of necrotic tumors from tissue slices. Further, necrosis-specific biomarker ions are detected in seconds with single MS scans of necrotic tumor tissue smears, which further accelerates the identification workflow by avoiding tissue sectioning and slide preparation. PMID:27734938

  8. Study of the performance of a compact sandwich calorimeter for the instrumentation of the very forward region of a future linear collider detector

    NASA Astrophysics Data System (ADS)

    Ghenescu, V.; Benhammou, Y.

    2017-02-01

    The FCAL collaboration is preparing large scale prototypes of special calorimeters to be used in the very forward region at a future linear electron positron collider for a precise and fast luminosity measurement and beam-tuning. These calorimeters are designed as sensor-tungsten calorimeters with very thin sensor planes to keep the Moliere radius small and dedicated FE electronics to match the timing and dynamic range requirements. A partially instrumented prototype was investigated in the CERN PS T9 beam in 2014 and at the DESY-II Synchrotron in 2015. It was operated in a mixed particle beam (electrons, muons and hadrons) of 5 GeV from PS facilities and with secondary electrons of 5 GeV energy from DESY-II. The results demonstrated a very good performance of the full readout chain. The high statistics data were used to study the response to different particles, perform sensor alignment and measure the longitudinal shower development in the sandwich. In addition, Geant4 MC simulations were done, and compared to the data.

  9. Unexpected Analyte Oxidation during Desorption Electrospray Ionization - Mass Spectrometry

    SciTech Connect

    Pasilis, Sofie P; Kertesz, Vilmos; Van Berkel, Gary J

    2008-01-01

    During the analysis of surface spotted analytes using desorption electrospray ionization mass spectrometry (DESI-MS), abundant ions are sometimes observed that appear to be the result of oxygen addition reactions. In this investigation, the effect of sample aging, the ambient lab environment, spray voltage, analyte surface concentration, and surface type on this oxidative modification of spotted analytes, exemplified by tamoxifen and reserpine, during analysis by desorption electrospray ionization mass spectrometry was studied. Simple exposure of the samples to air and to ambient lighting increased the extent of oxidation. Increased spray voltage lead also to increased analyte oxidation, possibly as a result of oxidative species formed electrochemically at the emitter electrode or in the gas - phase by discharge processes. These oxidative species are carried by the spray and impinge on and react with the sampled analyte during desorption/ionization. The relative abundance of oxidized species was more significant for analysis of deposited analyte having a relatively low surface concentration. Increasing spray solvent flow rate and addition of hydroquinone as a redox buffer to the spray solvent were found to decrease, but not entirely eliminate, analyte oxidation during analysis. The major parameters that both minimize and maximize analyte oxidation were identified and DESI-MS operational recommendations to avoid these unwanted reactions are suggested.

  10. Transcriptome landscape of perennial wild Cicer microphyllum uncovers functionally relevant molecular tags regulating agronomic traits in chickpea

    PubMed Central

    Srivastava, Rishi; Bajaj, Deepak; Malik, Ayushi; Singh, Mohar; Parida, Swarup K.

    2016-01-01

    The RNA-sequencing followed by de-novo transcriptome assembly identified 11621 genes differentially xpressed in roots vs. shoots of a wild perennial Cicer microphyllum. Comparative analysis of transcriptomes between microphyllum and cultivated desi cv. ICC4958 detected 12772 including 3242 root- and 1639 shoot-specific microphyllum genes with 85% expression validation success rate. Transcriptional reprogramming of microphyllum root-specific genes implicates their possible role in regulating differential natural adaptive characteristics between wild and cultivated chickpea. The transcript-derived 5698 including 282 in-silico polymorphic SSR and 127038 SNP markers annotated at a genome-wide scale exhibited high amplification and polymorphic potential among cultivated (desi and kabuli) and wild accessions suggesting their utility in chickpea genomics-assisted breeding applications. The functional significance of markers was assessed based on their localization in non-synonymous coding and regulatory regions of microphyllum root-specific genes differentially expressed predominantly in ICC 4958 roots under drought stress. A high-density 490 genic SSR- and SNP markers-anchored genetic linkage map identified six major QTLs regulating drought tolerance-related traits, yield per plant and harvest-index in chickpea. The integration of high-resolution QTL mapping with comparative transcriptome profiling delineated five microphyllum root-specific genes with non-synonymous and regulatory SNPs governing drought-responsive yield traits. Multiple potential key regulators and functionally relevant molecular tags delineated can drive translational research and drought tolerance-mediated chickpea genetic enhancement. PMID:27680662

  11. XMS: Cross-Platform Normalization Method for Multimodal Mass Spectrometric Tissue Profiling

    NASA Astrophysics Data System (ADS)

    Golf, Ottmar; Muirhead, Laura J.; Speller, Abigail; Balog, Júlia; Abbassi-Ghadi, Nima; Kumar, Sacheen; Mróz, Anna; Veselkov, Kirill; Takáts, Zoltán

    2015-01-01

    Here we present a proof of concept cross-platform normalization approach to convert raw mass spectra acquired by distinct desorption ionization methods and/or instrumental setups to cross-platform normalized analyte profiles. The initial step of the workflow is database driven peak annotation followed by summarization of peak intensities of different ions from the same molecule. The resulting compound-intensity spectra are adjusted to a method-independent intensity scale by using predetermined, compound-specific normalization factors. The method is based on the assumption that distinct MS-based platforms capture a similar set of chemical species in a biological sample, though these species may exhibit platform-specific molecular ion intensity distribution patterns. The method was validated on two sample sets of (1) porcine tissue analyzed by laser desorption ionization (LDI), desorption electrospray ionization (DESI), and rapid evaporative ionization mass spectrometric (REIMS) in combination with Fourier transformation-based mass spectrometry; and (2) healthy/cancerous colorectal tissue analyzed by DESI and REIMS with the latter being combined with time-of-flight mass spectrometry. We demonstrate the capacity of our method to reduce MS-platform specific variation resulting in (1) high inter-platform concordance coefficients of analyte intensities; (2) clear principal component based clustering of analyte profiles according to histological tissue types, irrespective of the used desorption ionization technique or mass spectrometer; and (3) accurate "blind" classification of histologic tissue types using cross-platform normalized analyte profiles.

  12. FPGA-based klystron linearization implementations in scope of ILC

    NASA Astrophysics Data System (ADS)

    Omet, M.; Michizono, S.; Matsumoto, T.; Miura, T.; Qiu, F.; Chase, B.; Varghese, P.; Schlarb, H.; Branlard, J.; Cichalewski, W.

    2014-12-01

    We report the development and implementation of four FPGA-based predistortion-type klystron linearization algorithms. Klystron linearization is essential for the realization of ILC, since it is required to operate the klystrons 7% in power below their saturation. The work presented was performed in international collaborations at the Fermi National Accelerator Laboratory (FNAL), USA and the Deutsches Elektronen Synchrotron (DESY), Germany. With the newly developed algorithms, the generation of correction factors on the FPGA was improved compared to past algorithms, avoiding quantization and decreasing memory requirements. At FNAL, three algorithms were tested at the Advanced Superconducting Test Accelerator (ASTA), demonstrating a successful implementation for one algorithm and a proof of principle for two algorithms. The functionality of the algorithm implemented at DESY was demonstrated successfully in a simulation. Besides this, a proof of principle of an FPGA-based klystron and cavity simulator implemented at the High Energy Accelerator Research Organization (KEK), Japan, was demonstrated. Its purpose is to allow the development and test of digital LLRF control systems including klystron linearization algorithms when no actual klystron and cavity are available.

  13. FPGA-based klystron linearization implementations in scope of ILC

    NASA Astrophysics Data System (ADS)

    Omet, M.; Michizono, S.; Matsumoto, T.; Miura, T.; Qiu, F.; Chase, B.; Varghese, P.; Schlarb, H.; Branlard, J.; Cichalewski, W.

    2015-04-01

    We report the development and implementation of four FPGA-based predistortion-type klystron linearization algorithms. Klystron linearization is essential for the realization of ILC, since it is required to operate the klystrons 7% in power below their saturation. The work presented was performed in international collaborations at the Fermi National Accelerator Laboratory (FNAL), USA and the Deutsches Elektronen Synchrotron (DESY), Germany. With the newly developed algorithms, the generation of correction factors on the FPGA was improved compared to past algorithms, avoiding quantization and decreasing memory requirements. At FNAL, three algorithms were tested at the Advanced Superconducting Test Accelerator (ASTA), demonstrating a successful implementation for one algorithm and a proof of principle for two algorithms. The functionality of the algorithm implemented at DESY was demonstrated successfully in a simulation. Besides this, a proof of principle of an FPGA-based klystron and cavity simulator implemented at the High Energy Accelerator Research Organization (KEK), Japan was demonstrated. Its purpose is to allow the development and test of digital LLRF control systems including klystron linearization algorithms when no actual klystron and cavity are available.

  14. Pharmaceutical cleaning validation using non-proximate large-area desorption electrospray ionization mass spectrometry.

    PubMed

    Soparawalla, Santosh; Salazar, Gary A; Perry, Richard H; Nicholas, Mark; Cooks, R Graham

    2009-01-01

    Desorption electrospray ionization (DESI) is a droplet-based ionization method that is applied to samples in the ambient environment with little or no sample preparation. Its utility for industrial applications is explored here for the case of pharmaceutical cleaning validation. A non-proximate large-area DESI system was built to examine representative areas of the surfaces of reaction vessels used in active product ingredient (API) manufacturing. A large-area sprayer capable of sampling an area of approximately 2.5 cm(2) was coupled with a transport tube to allow sensitive, representative sampling of APIs from a stainless steel surface 1 m away from the mass spectrometer. The system was used to detect the APIs neostigmine, acebutolol, amiloride, amiodarone, ibuprofen, montelukast, potassium clavulanate, and beta-estradiol, at levels as low as 30-10 ng/cm(2), easily satisfying the general acceptable limits set by the pharmaceutical industry. These levels were achieved from surfaces resembling the equipment used in API manufacturing processes at a rate of 30 s per analysis.

  15. Concept, implementation and commissioning of the automation system for the accelerator module test facility AMTF

    SciTech Connect

    Böckmann, Torsten A.; Korth, Olaf; Clausen, Matthias; Schoeneburg, Bernd

    2014-01-29

    The European XFEL project launched on June 5, 2007 will require about 103 accelerator modules as a main part of the XFEL linear accelerator. All superconducting components constituting the accelerator module like cavities and magnets have to be tested before the assembly. For the tests of the individual cavities and the complete modules an XFEL Accelerator Module Test Facility (AMTF) has been erected at DESY. The process control system EPICS (Experimental Physics and Industrial Control System) is used to control and operate the cryogenic plant and all its subcomponents. A complementary component of EPICS is the Open Source software suit CSS (Control System Studio). CSS is an integrated engineering, maintenance and operating tool for EPICS. CSS enables local and remote operating and monitoring of the complete system and thus represents the human machine interface. More than 250 PROFIBUS nodes work at the accelerator module test facility. DESY installed an extensive diagnostic and condition monitoring system. With these diagnostic tools it is possible to examine the correct installation and configuration of all PROFIBUS nodes in real time. The condition monitoring system based on FDT/DTM technology shows the state of the PROFIBUS devices at a glance. This information can be used for preventive maintenance which is mandatory for continuous operation of the AMTF facility. The poster will describe all steps form engineering to implementation and commissioning.

  16. Draft genome sequence of Cicer reticulatum L., the wild progenitor of chickpea provides a resource for agronomic trait improvement.

    PubMed

    Gupta, Sonal; Nawaz, Kashif; Parween, Sabiha; Roy, Riti; Sahu, Kamlesh; Kumar Pole, Anil; Khandal, Hitaishi; Srivastava, Rishi; Kumar Parida, Swarup; Chattopadhyay, Debasis

    2016-08-26

    Cicer reticulatum L. is the wild progenitor of the fourth most important legume crop chickpea (C. arietinum L.). We assembled short-read sequences into 416 Mb draft genome of C. reticulatum and anchored 78% (327 Mb) of this assembly to eight linkage groups. Genome annotation predicted 25,680 protein-coding genes covering more than 90% of predicted gene space. The genome assembly shared a substantial synteny and conservation of gene orders with the genome of the model legume Medicago truncatula. Resistance gene homologs of wild and domesticated chickpeas showed high sequence homology and conserved synteny. Comparison of gene sequences and nucleotide diversity using 66 wild and domesticated chickpea accessions suggested that the desi type chickpea was genetically closer to the wild species than the kabuli type. Comparative analyses predicted gene flow between the wild and the cultivated species during domestication. Molecular diversity and population genetic structure determination using 15,096 genome-wide single nucleotide polymorphisms revealed an admixed domestication pattern among cultivated (desi and kabuli) and wild chickpea accessions belonging to three population groups reflecting significant influence of parentage or geographical origin for their cultivar-specific population classification. The assembly and the polymorphic sequence resources presented here would facilitate the study of chickpea domestication and targeted use of wild Cicer germplasms for agronomic trait improvement in chickpea.

  17. A dopant for improved sensitivity in easy ambient sonic-spray ionization mass spectrometry.

    PubMed

    Santos, Jandyson M; Vendramini, Pedro H; Schwab, Nicolas V; Eberlin, Marcos N; de Morais, Damila R

    2016-01-01

    Recently, 3-nitrobenzonitrile (3-NBN) has been used to improve sensitivity of sonic-spray ionization mass spectrometry. Easy ambient sonic-spray ionization (EASI) is one of the simplest, gentlest and most used spray-based desorption/ionization ambient techniques, but limited sensitivity has been commonly taken as its major drawback. Herein we investigate the use of 3-NBN as a dopant in EASI-MS for improved sensitivity. Using a few typical EASI samples as test cases, the presence of 10 ppm (µg ml(-1) ) of 3-NBN in the spray solvent showed two to fourfold gains in EASI-MS sensitivity as measured both by total ion current and S/N ratios, accompanied with significant reductions in chemical noise. Sensitivity for DESI using 3-NBN as a dopant also improved and dopant DESI versus dopant EASI sensitivities were compared. The use of solvent dopants seems therefore to be a promising strategy to improve sensitivity for spray-based ambient MS techniques. Copyright © 2015 John Wiley & Sons, Ltd.

  18. Mosaic3: a red-sensitive upgrade for the prime focus camera at the Mayall 4m telescope

    NASA Astrophysics Data System (ADS)

    Dey, Arjun; Rabinowitz, David; Karcher, Armin; Bebek, Chris; Baltay, Charles; Sprayberry, David; Valdes, Frank; Stupak, Bob; Donaldson, John; Emmet, Will; Hurteau, Tom; Abareshi, Behzad; Marshall, Bob; Lang, Dustin; Fitzpatrick, Mike; Daly, Phil; Joyce, Dick; Schlegel, David; Schweiker, Heidi; Allen, Lori; Blum, Bob; Levi, Michael

    2016-08-01

    The Dark Energy Spectroscopic Instrument (DESI) is under construction and will be used to measure the expansion history of the Universe using the Baryon Acoustic Oscillation (BAO) technique and the growth of structure using redshift-space distortions (RSD). The spectra of 30 million galaxies over 14000 sq deg will be measured over the course of the experiment. In order to provide spectroscopic targets for the DESI survey, we are carrying out a three-band (g,r,z ) imaging survey of the sky using the NOAO 4-m telescopes at Kitt Peak National Observatory (KPNO) and the Cerro Tololo Interamerican Observatory (CTIO). At KPNO, we will use an upgraded version of the Mayall 4m telescope prime focus camera, Mosaic3, to carry out a z-band survey of the Northern Galactic Cap at declinations δ>=+30 degrees. By equipping an existing Dewar with four 4kx4k fully depleted CCDs manufactured by the Lawrence Berkeley National Laboratory (LBNL), we increased the z-band throughput of the system by a factor of 1.6. These devices have the thickest active area fielded at a telescope. The Mosaic3 z-band survey will be complemented by g-band and r-band observations using the Bok telescope and 90 Prime imager on Kitt Peak. We describe the upgrade and performance of the Mosaic3 instrument and the scope of the northern survey.

  19. Precision Spectrophotometric Calibration System for Dark Energy Instruments

    SciTech Connect

    Schubnell, Michael S.

    2015-06-30

    For this research we build a precision calibration system and carried out measurements to demonstrate the precision that can be achieved with a high precision spectrometric calibration system. It was shown that the system is capable of providing a complete spectrophotometric calibration at the sub-pixel level. The calibration system uses a fast, high precision monochromator that can quickly and efficiently scan over an instrument’s entire spectral range with a spectral line width of less than 0.01 nm corresponding to a fraction of a pixel on the CCD. The system was extensively evaluated in the laboratory. Our research showed that a complete spectrophotometric calibration standard for spectroscopic survey instruments such as DESI is possible. The monochromator precision and repeatability to a small fraction of the DESI spectrograph LSF was demonstrated with re-initialization on every scan and thermal drift compensation by locking to multiple external line sources. A projector system that mimics telescope aperture for point source at infinity was demonstrated.

  20. Draft genome sequence of Cicer reticulatum L., the wild progenitor of chickpea provides a resource for agronomic trait improvement

    PubMed Central

    Gupta, Sonal; Nawaz, Kashif; Parween, Sabiha; Roy, Riti; Sahu, Kamlesh; Kumar Pole, Anil; Khandal, Hitaishi; Srivastava, Rishi; Kumar Parida, Swarup

    2017-01-01

    Abstract Cicer reticulatum L. is the wild progenitor of the fourth most important legume crop chickpea (C. arietinum L.). We assembled short-read sequences into 416 Mb draft genome of C. reticulatum and anchored 78% (327 Mb) of this assembly to eight linkage groups. Genome annotation predicted 25,680 protein-coding genes covering more than 90% of predicted gene space. The genome assembly shared a substantial synteny and conservation of gene orders with the genome of the model legume Medicago truncatula. Resistance gene homologs of wild and domesticated chickpeas showed high sequence homology and conserved synteny. Comparison of gene sequences and nucleotide diversity using 66 wild and domesticated chickpea accessions suggested that the desi type chickpea was genetically closer to the wild species than the kabuli type. Comparative analyses predicted gene flow between the wild and the cultivated species during domestication. Molecular diversity and population genetic structure determination using 15,096 genome-wide single nucleotide polymorphisms revealed an admixed domestication pattern among cultivated (desi and kabuli) and wild chickpea accessions belonging to three population groups reflecting significant influence of parentage or geographical origin for their cultivar-specific population classification. The assembly and the polymorphic sequence resources presented here would facilitate the study of chickpea domestication and targeted use of wild Cicer germplasms for agronomic trait improvement in chickpea. PMID:27567261

  1. Interspecific variation in localization of hypericins and phloroglucinols in the genus Hypericum as revealed by desorption electrospray ionization mass spectrometry imaging.

    PubMed

    Kucharíková, Andrea; Kimáková, Katarína; Janfelt, Christian; Čellárová, Eva

    2016-05-01

    Plants of the genus Hypericum are widely known for their therapeutic properties. The most biologically active compounds of this genus are naphtodianthrones and phloroglucinols. Indirect desorption electrospray ionization mass spectrometry (DESI-MS) imaging allows visualization and localization of secondary metabolites in different plant tissues. This study is focused on localization of major secondary compounds in the leaves of 17 different in vitro cultured Hypericum species classified in 11 sections. Generally, all identified naphtodianthrones, protohypericin, hypericin, protopseudohypericin and pseudohypericin were co-localized in the dark glands of eight hypericin producing species at the site of their accumulation. The known phloroglucinols, hyperforin, adhyperforin, hyperfirin and some new phloroglucinols with m/z [M - H](-) 495 and 569 were localized in the translucent and pale cavities within the leaf in the majority of studied species. The comparison of different Hypericum species revealed an interspecific variation in the distribution of the dark and translucent glands corresponding with the localization of hypericins and phloroglucinols. Moreover, similarities in the localization and composition of the phloroglucinols were observed in the species belonging to the same section. Adding to various quantitative studies focused on the detection of secondary metabolites, this work using indirect DESI-MSI offers additional valuable information about localization of the above-mentioned compounds.

  2. Whole Reproductive System Non-Negative Matrix Factorization Mass Spectrometry Imaging of an Early-Stage Ovarian Cancer Mouse Model

    PubMed Central

    Kim, Jaeyeon; Bennett, Rachel V.; Parry, R. Mitchell; Gaul, David A.; Wang, May D.; Matzuk, Martin M.; Fernández, Facundo M.

    2016-01-01

    High-grade serous carcinoma (HGSC) is the most common and deadliest form of ovarian cancer. Yet it is largely asymptomatic in its initial stages. Studying the origin and early progression of this disease is thus critical in identifying markers for early detection and screening purposes. Tissue-based mass spectrometry imaging (MSI) can be employed as an unbiased way of examining localized metabolic changes between healthy and cancerous tissue directly, at the onset of disease. In this study, we describe MSI results from Dicer-Pten double-knockout (DKO) mice, a mouse model faithfully reproducing the clinical nature of human HGSC. By using non-negative matrix factorization (NMF) for the unsupervised analysis of desorption electrospray ionization (DESI) datasets, tissue regions are segregated based on spectral components in an unbiased manner, with alterations related to HGSC highlighted. Results obtained by combining NMF with DESI-MSI revealed several metabolic species elevated in the tumor tissue and/or surrounding blood-filled cyst including ceramides, sphingomyelins, bilirubin, cholesterol sulfate, and various lysophospholipids. Multiple metabolites identified within the imaging study were also detected at altered levels within serum in a previous metabolomic study of the same mouse model. As an example workflow, features identified in this study were used to build an oPLS-DA model capable of discriminating between DKO mice with early-stage tumors and controls with up to 88% accuracy. PMID:27159635

  3. The 3D Structure of the Proton

    NASA Astrophysics Data System (ADS)

    Kaiser, Ralf

    2012-09-01

    When Rutherford, Geiger and Marsden discovered the atomic nucleus in 1909 in Manchester, they at the same time also laid the foundations for the most successful method to study the structure of nuclei and nucleons. They found a point-like scattering centre inside the atom and identified it with the atomic nucleus and the theoretical description of this process has been known as Rutherford scattering ever since. The deviation between the theoretical description for a point-like scattering centre and experimental data has since been used to reveal information about the structure of the nucleus as well as the nucleon. There has been a continuous development from Hofstadters experiments in the 1950s, over the SLAC experiments in the 60s and 70s to the the HERA experiments at DESY and the experimental programme at Jeffersonlab. In this paper I am presenting the most recent results in Deeply Virtual Compton Scattering from the Hermes experiment at DESY, taken with a high density unpolarised target and a recoil detector in 2006/7.

  4. Desorption electrospray ionization-mass spectrometric analysis of low vapor pressure chemical particulates collected from a surface.

    PubMed

    Ewing, K J; Gibson, D; Sanghera, J; Miklos, F

    2015-01-01

    The collection of a low vapor pressure chemical simulant triethyl phosphate sorbed onto silica gel (TEP/SG) from a surface with subsequent analysis of the TEP/SG particulates using desorption electrospray ionization-mass spectrometry (DESI-MS) is described. Collection of TEP/SG particulates on a surface was accomplished using a sticky screen sampler composed of a stainless steel screen coated with partially polymerized polydimethylsiloxane (PDMS). DESI-MS analysis of TEP/SG particulates containing different percentages of TEP sorbed onto silica gel enabled the generation of response curves for the TEP ions m/z 155 and m/z 127. Using the response curves the calculation of the mass of TEP in a 25 wt% sample of TEP/SG was calculated, results show that the calculated mass of TEP was 14% different from the actual mass of TEP in the sample using the m/z 127 TEP ion response curve. Detection limits for the TEP vapor and TEP/SG particulates were calculated to be 4 μg and 6 particles, respectively.

  5. Online Monitoring of Methanol Electro-Oxidation Reactions by Ambient Mass Spectrometry

    NASA Astrophysics Data System (ADS)

    Cheng, Si; Wu, Qiuhua; Dewald, Howard D.; Chen, Hao

    2016-08-01

    Online detection of methanol electro-oxidation reaction products [e.g., formaldehyde (HCHO)] by mass spectrometry (MS) is challenging, owing to the high salt content and extreme pH of the electrolyte solution as well as the difficulty in ionizing the reaction products. Herein we present an online ambient mass spectrometric approach for analyzing HCHO generated from methanol electro-oxidation, taking the advantage of high salt tolerance of desorption electrospray ionization mass spectrometry (DESI-MS). It was found that HCHO can be detected as PhNHNH+=CH2 (m/z 121) by DESI after online derivatization with PhNHNH2. With this approach, the analysis of HCHO from methanol electro-oxidation by MS was carried out not only in acidic condition but also in alkaline media for the first time. Efficiencies of different electrodes for methanol oxidation at different pHs were also evaluated. Our results show that Au electrode produces more HCHO than Pt-based electrodes at alkaline pH, while the latter have higher yields at acidic solution. The presented methodology would be of great value for elucidating fuel cell reaction mechanisms and for screening ideal fuel cell electrode materials.

  6. Support of experimental high energy physics research at the University of South Carolina. Final technical report, February 1992--February 1996

    SciTech Connect

    Purohit, M.V.; Rosenfeld, C.; Wilson, J.R.

    1996-12-31

    This brief report summarizes the activities of the University of South Carolina`s high energy physics group during the three-year period. The activities of the group began in 1980 under a predecessor grant from DOE, and continue today under a successor grant. The retirements of one grant in favor of another were for reasons of administrative convenience or necessity. The characterization of the report as final is not reflective of the group`s projects, which by-and-large continue with support from the successor grant. The experiments with which the USC group had some significant relationship during the period of this grant were ARGUS (at DESY`s DORIS e{sup +}e{sup {minus}} collider), AMY (at KEK`s TRISTAN e{sup +}e{sup {minus}} collider). Fermilab E687, Fermilab E789, Fermilab E791, Fermilab E803, and Fermilab E872. The authors give a brief synopsis of USC`s participation in each of these projects and a few projects of lesser magnitude as well.

  7. High-speed tandem mass spectrometric in situ imaging by nanospray desorption electrospray ionization mass spectrometry.

    PubMed

    Lanekoff, Ingela; Burnum-Johnson, Kristin; Thomas, Mathew; Short, Joshua; Carson, James P; Cha, Jeeyeon; Dey, Sudhansu K; Yang, Pengxiang; Prieto Conaway, Maria C; Laskin, Julia

    2013-10-15

    Nanospray desorption electrospray ionization (nano-DESI) combined with tandem mass spectrometry (MS/MS), high-resolution mass analysis of the fragment ions (m/Δm = 17 500 at m/z 200), and rapid spectral acquisition enabled simultaneous imaging and identification of a large number of metabolites and lipids from 92 selected m/z windows (±1 Da) with a spatial resolution of better than 150 μm. Mouse uterine sections of implantation sites on day 6 of pregnancy were analyzed in the ambient environment without any sample pretreatment. MS/MS imaging was performed by scanning the sample under the nano-DESI probe at 10 μm/s, while higher-energy collision-induced dissociation (HCD) spectra were acquired for a targeted inclusion list of 92 m/z values at a rate of ∼6.3 spectra/s. Molecular ions and their corresponding fragments, separated by high-resolution mass analysis, were assigned on the basis of accurate mass measurement. Using this approach, we were able to identify and image both abundant and low-abundance isobaric and isomeric species within each m/z window. MS/MS analysis enabled efficient separation and identification of isomeric and isobaric phospholipids that are difficult to separate in full-scan mode. Furthermore, we identified several metabolites associated with early pregnancy and obtained the first 2D images of these molecules.

  8. Measuring cosmic velocities with 21 cm intensity mapping and galaxy redshift survey cross-correlation dipoles

    NASA Astrophysics Data System (ADS)

    Hall, Alex; Bonvin, Camille

    2017-02-01

    We investigate the feasibility of measuring the effects of peculiar velocities in large-scale structure using the dipole of the redshift-space cross-correlation function. We combine number counts of galaxies with brightness-temperature fluctuations from 21 cm intensity mapping, demonstrating that the dipole may be measured at modest significance (≲2 σ ) by combining the upcoming radio survey Canadian Hydrogen Intensity Mapping Experiment with the future redshift surveys of Dark Energy Spectroscopic Instrument (DESI) and Euclid. More significant measurements (≲10 σ ) will be possible by combining intensity maps from the Square Kilometre Array (SKA) with these of DESI or Euclid, and an even higher significance measurement (≲100 σ ) may be made by combining observables completely internally to the SKA. We account for effects such as contamination by wide-angle terms, interferometer noise and beams in the intensity maps, nonlinear enhancements to the power spectrum, stacking multiple populations, sensitivity to the magnification slope, and the possibility that number counts and intensity maps probe the same tracers. We also derive a new expression for the covariance matrix of multitracer redshift-space correlation function estimators with arbitrary orientation weights, which may be useful for upcoming surveys aiming at measuring redshift-space clustering with multiple tracers.

  9. Cosmic Visions Dark Energy:Science

    SciTech Connect

    Dodelson, S.; Slosar, A.; Heitmann, K.; Hirata, C.; Honscheid, K.; Roodman, A.; Seljak, U.; Trodden, M.

    2016-04-26

    Cosmic surveys provide crucial information about high energy physics including strong evidence for dark energy, dark matter, and inflation. Ongoing and upcoming surveys will start to identify the underlying physics of these new phenomena, including tight constraints on the equation of state of dark energy, the viability of modified gravity, the existence of extra light species, the masses of the neutrinos, and the potential of the field that drove inflation. Even after the Stage IV experiments, DESI and LSST, complete their surveys, there will still be much information left in the sky. This additional information will enable us to understand the physics underlying the dark universe at an even deeper level and, in case Stage IV surveys find hints for physics beyond the current Standard Model of Cosmology, to revolutionize our current view of the universe. There are many ideas for how best to supplement and aid DESI and LSST in order to access some of this remaining information and how surveys beyond Stage IV can fully exploit this regime. These ideas flow to potential projects that could start construction in the 2020's.

  10. Cosmic Visions Dark Energy. Science

    SciTech Connect

    Dodelson, Scott; Heitmann, Katrin; Hirata, Chris; Honscheid, Klaus; Roodman, Aaron; Seljak, Uroš; Slosar, Anže; Trodden, Mark

    2016-04-26

    Cosmic surveys provide crucial information about high energy physics including strong evidence for dark energy, dark matter, and inflation. Ongoing and upcoming surveys will start to identify the underlying physics of these new phenomena, including tight constraints on the equation of state of dark energy, the viability of modified gravity, the existence of extra light species, the masses of the neutrinos, and the potential of the field that drove inflation. Even after the Stage IV experiments, DESI and LSST, complete their surveys, there will still be much information left in the sky. This additional information will enable us to understand the physics underlying the dark universe at an even deeper level and, in case Stage IV surveys find hints for physics beyond the current Standard Model of Cosmology, to revolutionize our current view of the universe. There are many ideas for how best to supplement and aid DESI and LSST in order to access some of this remaining information and how surveys beyond Stage IV can fully exploit this regime. These ideas flow to potential projects that could start construction in the 2020's.

  11. Using ambient ozone for assignment of double bond position in unsaturated lipids.

    PubMed

    Ellis, Shane R; Hughes, Jessica R; Mitchell, Todd W; in het Panhuis, Marc; Blanksby, Stephen J

    2012-03-07

    Unsaturated lipids deposited onto a range of materials are observed to react with the low concentrations of ozone present in normal laboratory air. Parent lipids and ozonolysis cleavage products are both detected directly from surfaces by desorption electrospray ionisation mass spectrometry (DESI-MS) with the resulting mass spectra providing clear evidence of the double bond position within these molecules. This serendipitous process has been coupled with thin-layer chromatography (TLC) to provide a simple but powerful approach for the detailed structural elucidation of lipids present in complex biological extracts. Lipid extracts from human lens were deposited onto normal phase TLC plates and then developed to separate components according to lipid class. Exposure of the developed plates to laboratory air for ca. 1 h prior to DESI-MS analysis gave rise to ozonolysis products allowing for the unambiguous identification of double bond positions in even low abundant, unsaturated lipids. In particular, the co-localization of intact unsaturated lactosylceramides (LacCer) with products from their oxidative cleavage provide the first evidence for the presence of three isomeric LacCer (d18:0/24:1) species in the ocular lens lipidome, i.e., variants with double bonds at the n-9, n-7 and n-5 positions.

  12. Preface

    NASA Astrophysics Data System (ADS)

    Dorn, H.; Lüst, D.

    2004-06-01

    These proceedings contain most of the talks presented at the 36th International Symposium Ahrenshoop on the Theoryof Elementary Particles which took place from August 26-30, 2003 in Berlin-Schmöckwitz. The symposium was jointly organized by the Institute of Physics of the Humboldt University Berlin and DESY Zeuthen.The conference continued an already quite long tradition starting with meetings at the Baltic Sea cost, mainly in the little scenic village Ahrenshoop. Over the years the organizers kept bringing together physicists from various countries in a both productive and familiar atmosphere.This years symposium was devoted to Recent Developments in String/M-Theory and Field Theory. We were able to welcome a remarkable set of leading scientists in the field. All the five days started with a pedagogical overview talk on most recent topics, such as string cosmology and phenomenology, strings and branes in plane wave backgrounds, D-branes and time dependent dynamics, matrix models and topological field theories, higher spin theories, followed then by more specific shorter contributions.We thank all the authors for preparing their manuscripts. For financial support we thank the DFG-Schwerpunktprogramm 1096, DESY Zeuthen and Humboldt University. Last not least our thanks go to our co-organizers Johanna Erdmenger, Stephan Stieberger and Gerhard Weigt.

  13. Preliminary results on evaluation of chickpea, Cicer arietinum, genotypes for resistance to the pulse beetle, Callosobruchus maculatus.

    PubMed

    Erle, F; Ceylan, F; Erdemir, T; Toker, C

    2009-01-01

    Abstract The chickpea, Cicer arietinum L. (Fabales: Fabaceae), seeds are vulnerable, both in the field and in storage, to attack by seed-beetles. Beetles of the genus Callosobruchus are major storage pests of chickpea crops and cause considerable economic losses. In the present study, a total of 11 chickpea genotypes including five 'kabuli' (Mexican white, Diyar, CA 2969, ILC 8617 and ACC 245) and six 'desi' chickpeas (ICC 1069, ICC 12422, ICC 14336, ICC 4957, ICC 4969 and ICC 7509) were evaluated for resistance to the pulse beetle Callosobruchus maculatus F. (Coleoptera: Bruchidae). Resistance was evaluated by measuring percent damage to seeds. Damage to seeds by C. maculatus was manifested by the round exit holes with the 'flap' of seed coat made by emerging adults. Of the 11 genotypes tested, only one (ICC 4969) exhibited a complete resistance to C. maculatus in both free-choice and no-choice tests; no seed damage was found over the test period. In general, the 'desi' chickpeas were more resistant to C. maculatus than the 'kabuli' chickpeas. Among the tested chickpea genotypes, only ICC 4969 can be used as a source of C. maculatus resistance in breeding programmes that could then be grown in organic cultivation free from pesticides.

  14. Rapid detection of cocaine, benzoylecgonine and methylecgonine in fingerprints using surface mass spectrometry.

    PubMed

    Bailey, Melanie J; Bradshaw, Robert; Francese, Simona; Salter, Tara L; Costa, Catia; Ismail, Mahado; P Webb, Roger; Bosman, Ingrid; Wolff, Kim; de Puit, Marcel

    2015-09-21

    Latent fingerprints provide a potential route to the secure, high throughput and non-invasive detection of drugs of abuse. In this study we show for the first time that the excreted metabolites of drugs of abuse can be detected in fingerprints using ambient mass spectrometry. Fingerprints and oral fluid were taken from patients attending a drug and alcohol treatment service. Gas chromatography mass spectrometry (GC-MS) was used to test the oral fluid of patients for the presence of cocaine and benzoylecgonine. The corresponding fingerprints were analysed using Desorption Electrospray Ionization (DESI) which operates under ambient conditions and Ion Mobility Tandem Mass Spectrometry Matrix Assisted Laser Desorption Ionization (MALDI-IMS-MS/MS) and Secondary Ion Mass Spectrometry (SIMS). The detection of cocaine, benzoylecgonine (BZE) and methylecgonine (EME) in latent fingerprints using both DESI and MALDI showed good correlation with oral fluid testing. The sensitivity of SIMS was found to be insufficient for this application. These results provide exciting opportunities for the use of fingerprints as a new sampling medium for secure, non-invasive drug detection. The mass spectrometry techniques used here offer a high level of selectivity and consume only a small area of a single fingerprint, allowing repeat and high throughput analyses of a single sample.

  15. Test Sample for the Spatially Resolved Quantification of Illicit Drugs on Fingerprints Using Imaging Mass Spectrometry.

    PubMed

    Muramoto, Shin; Forbes, Thomas P; van Asten, Arian C; Gillen, Greg

    2015-01-01

    A novel test sample for the spatially resolved quantification of illicit drugs on the surface of a fingerprint using time-of-flight secondary ion mass spectrometry (ToF-SIMS) and desorption electrospray ionization mass spectrometry (DESI-MS) was demonstrated. Calibration curves relating the signal intensity to the amount of drug deposited on the surface were generated from inkjet-printed arrays of cocaine, methamphetamine, and heroin with a deposited-mass ranging nominally from 10 pg to 50 ng per spot. These curves were used to construct concentration maps that visualized the spatial distribution of the drugs on top of a fingerprint, as well as being able to quantify the amount of drugs in a given area within the map. For the drugs on the fingerprint on silicon, ToF-SIMS showed great success, as it was able to generate concentration maps of all three drugs. On the fingerprint on paper, only the concentration map of cocaine could be constructed using ToF-SIMS and DESI-MS, as the signals of methamphetamine and heroin were completely suppressed by matrix and substrate effects. Spatially resolved quantification of illicit drugs using imaging mass spectrometry is possible, but the choice of substrates could significantly affect the results.

  16. INSPIRE: A new scientific information system for HEP

    NASA Astrophysics Data System (ADS)

    Ivanov, R.; Raae, L.

    2010-04-01

    The status of high-energy physics (HEP) information systems has been jointly analyzed by the libraries of CERN, DESY, Fermilab and SLAC. As a result, the four laboratories have started the INSPIRE project - a new platform built by moving the successful SPIRES features and content, curated at DESY, Fermilab and SLAC, into the open-source CDS Invenio digital library software that was developed at CERN. INSPIRE will integrate current acquisition workflows and databases to host the entire body of the HEP literature (about one million records), aiming to become the reference HEP scientific information platform worldwide. It will provide users with fast access to full text journal articles and preprints, but also material such as conference slides and multimedia. INSPIRE will empower scientists with new tools to discover and access the results most relevant to their research, enable novel text- and data-mining applications, and deploy new metrics to assess the impact of articles and authors. In addition, it will introduce the "Web 2.0" paradigm of user-enriched content in the domain of sciences, with community-based approaches to scientific publishing. INSPIRE represents a natural evolution of scholarly communication built on successful community-based information systems, and it provides a vision for information management in other fields of science. Inspired by the needs of HEP, we hope that the INSPIRE project will be inspiring for other communities.

  17. Wissenschaft, die unsere Kultur verändert. Tiefenschichten des Streits um die Evolutionstheorie

    NASA Astrophysics Data System (ADS)

    Patzelt, Werner J.

    Die Evolutionstheorie ist eine der erfolgreichsten wissenschaftlichen Theorien. Sie erlaubt es, unsere Herkunft zu verstehen und riskante Merkmale gerade der menschlichen Spezies zu begreifen. Zugleich ist die Evolutionstheorie eine der umstrittensten Theorien. Das liegt nicht an ihrer empirischen Tragfähigkeit, sondern an ihrem Gegenstand. Sie handelt nämlich nicht nur - wie Hunderte andere wissenschaftliche Theorien - von der "Welt da draußen“, sondern vor allem auch von uns selbst und von unserem Platz in dieser Welt. Den einen gilt sie obendrein als Überwinderin religiösen Aberglaubens, den anderen als neuer Zugang zu Gott und seinem Wirken in der Welt. Ferner sehen die einen in der Evolution eine unbezweifelbare Tatsache gleich der Schwerkraft oder dem Holocaust, die anderen aber eine - noch oder dauerhaft - unbewiesene Hypothese oder gar eine falsche Schöpfungslehre. Und während die meisten Streitfragen solcher Art nach wechselseitig akzeptierten Regeln ‚normaler Wissenschaft‘ geklärt werden, wird bei der Frage nach dem Woher unserer Spezies und Kultur die intellektuelle Zuständigkeit von Wissenschaft mitunter überhaupt bezweifelt. Anscheinend geht es schon um recht tiefe Schichten unserer Kultur und nicht nur der wissenschaftlichen, wenn - wie seit 150 Jahren - um die Evolutionstheorie gestritten wird. Wie sehen diese Schichten aus?

  18. Ökologische Grundlagen und limitierende Faktoren der Renaturierung

    NASA Astrophysics Data System (ADS)

    Hölzel, N.; Rebele, F.; Rosenthal, G.; Eichberg, C.

    In den dicht besiedelten und agrarisch besonders intensiv genutzten Regionen Mittel- und Westeuropas ist seit Ende des Zweiten Weltkrieges ein fortschreitender Verlust an naturnahen ökosystemen mit hoher biologischer Vielfalt zu verzeichnen. Spätestens seit den 1970er-Jahren ist daher die Neuschaffung und Wiederherstellung gefährdeter Lebensräume und Biozönosen zunehmend in den Mittelpunkt von Naturschutzmaßnahmen gerückt (Bakker 1989, Muller et al. 1998, Bakker und Berendse 1999). Aufgrund fehlender wissenschaftlicher Grundlagen und praktischer Erfahrungen wurden Renaturierungsmaßnahmen anfangs fast durchweg nach dem trial and error-Prinzip durchgeführt. Im Vordergrund standen dabei zunächst die Wiederherstellung adäquater abiotischer Standortbedingungen sowie die Reorganisation traditioneller Nutzungsmanagements. Bei Ersterem ging es neben der Wiedervernässung entwässerter Feuchtgebiete (Pfadenhauer und Grootjans 1999) vor allem darum, Eutrophierungseffekte zu beseitigen und die Produktivität des Standortes auf das Niveau der Zielgemeinschaft zurückzuführen (Gough und Marrs 1990, Oomes et al. 1996, Snow et al. 1997, Tallowin et al. 1998).

  19. Hermann Weyl's Phenomenological Contribution to Quantum Physics

    NASA Astrophysics Data System (ADS)

    Mastrobisi, Giorgio J.

    On examining carefully Weyl's writings one realizes that the great mathematician from Göttingen in his researches follows the programmatic scheme of the binomial of "wissenschaftliche Erkenntnis" (scientific Knowledge) and "philosophische Besinnung" (philosophical Reflection). In 1954 in a retrospective writing he affirmed: «The formulation of Einstein's Theory of Relativity and the Laws of Gravitation, valid in this context and corroborated by experimental proofs turning to experience, constitute a method which combines "Wesenanalyse" with "mathematische Konstruktion" of convincing and excellent exemplarity». This conviction has conducted him to a close collaboration with A. Einstein (documented by punctual correspondence) for the decisive formulation of the "General Theory of Relativity", but also of the Theory of unified Field of Gravitation and Electromagnetism and therefore the following formulation of some fundamental principles of Quantum Physics. So Weyl's theoretical formation was marked by the devotion toward a mathematical formalization ("mathematische Konstruktion") of physical phenomena, reporting each of them to the causal structure of the "mathematical thinking" and geometry, contemporarely to a strong inclination toward the phenomenological "Analysis of essence". He brings really a notable quantity of considerations in that 1954 essay by the point of view of the decisive role that the "pure Phenomenology" of Edmund Husserl developed in the determination of his scientific activity.

  20. The Nachlass (estate) of Heinrich von Eggeling (1869-1954), long-time secretary of the Anatomische Gesellschaft.

    PubMed

    Winkelmann, Andreas

    2015-09-01

    Heinrich von Eggeling (1869-1954), professor of anatomy in Breslau from 1922, was secretary of the Anatomische Gesellschaft (AG) from 1919 until 1949 and also editor of the Anatomischer Anzeiger, today's Annals of Anatomy. His "Wissenschaftlicher Nachlass [scientific estate]" could recently be located in private hands and has now been made available at the archive of the AG held by the current secretary. It consists of 45 folders, mainly containing von Eggeling's national and international correspondence from 1919 to 1953. It thus covers the times of the Weimar republic and of the "Third Reich" as well as the post-war period, when the AG had been officially closed down by the Allied Control Council and was eventually re-founded in 1949. Von Eggeling preserved this material despite war destruction of his Berlin home, where he lived after his retirement in 1935, and his cramped post-war confines in a small town near Hannover. The estate also includes autobiographical manuscripts of von Eggeling and some material from his predecessor, the first secretary of the AG since 1886, Karl von Bardeleben (1849-1918). There is evidence that the correspondence is not complete, even if there are no significant time gaps. The contents suggest that letters deemed insignificant, like fee reminders or editorial decisions, were discarded at some point, but it remains unclear by whom. This estate fills a significant gap in the historical material related to the AG and will be an important source for any future historical investigation regarding the society.

  1. Efficacy of a 0.0584% hydrocortisone aceponate spray in presumed feline allergic dermatitis: an open label pilot study.

    PubMed

    Schmidt, Vanessa; Buckley, Laura M; McEwan, Neil A; Rème, Christophe A; Nuttall, Tim J

    2012-02-01

    This study evaluated the efficacy of a 0.0584% hydrocortisone aceponate (HCA) spray (Cortavance(®); Virbac SA) in 10 cats with presumed allergic dermatitis. The cats initially received two sprays/100 cm(2) of skin once daily. Clinical lesions (a Feline Dermatitis Extent and Severity Index; FeDESI), pruritus (10 cm visual analog scale with grade descriptors) and owner assessments of efficacy, tolerance and ease of use (from 1=very poor to 5=excellent) were assessed every 14 days. The frequency of treatment was reduced after day 28 in cats with a >50% reduction in FeDESI and pruritus scores. One cat was lost to follow up at day 28 and two at day 42. Intention-to-treat data were analysed. The FeDESI [mean (SD): day 0, 42.2 (15.7) and day 56, 9.9 (11.7); P<0.0001] and pruritus scores [day 0, 61.2 mm (20.1) and day 56, 14.6 mm (16.1); P<0.0001] significantly decreased throughout the trial. The owner scores for tolerance [median (range): day 14, 4 (1-5) and day 56, 4 (3-5); P=0.003] and ease of administration [day 14, 3 (2-5) and day 56, 4 (2-5); P=0.02] significantly increased during the trial, but there was no significant change in efficacy scores [day 14, 4 (3-5) and day 56, 4 (2-5); P=0.5]. There were no adverse effects attributable to the HCA spray, no significant changes in weight [mean (SD): day 0, 5.0 kg (1.4) and day 56, 5.0 kg (1.6); P=0.51] and no significant changes in haematology, biochemistry or urinalysis (n=4). Six cats required every-other-day treatment and four required daily treatment. In conclusion, HCA spray appeared to be effective and safe in these cats, although it is not licensed for use in this species.

  2. Development work for a superconducting linear collider

    NASA Technical Reports Server (NTRS)

    Matheisen, Axel

    1995-01-01

    For future linear e(+)e(-) colliders in the TeV range several alternatives are under discussion. The TESLA approach is based on the advantages of superconductivity. High Q values of the accelerator structures give high efficiency for converting RF power into beam power. A low resonance frequency for the RF structures can be chosen to obtain a large number of electrons (positrons) per bunch. For a given luminosity the beam dimensions can be chosen conservatively which leads to relaxed beam emittance and tolerances at the final focus. Each individual superconducting accelerator component (resonator cavity) of this linear collider has to deliver an energy gain of 25 MeV/m to the beam. Today s.c. resonators are in use at CEBAF/USA, at DESY/Germany, Darmstadt/Germany KEK/Japan and CERN/Geneva. They show acceleration gradients between 5 MV/m and 10 MV/m. Encouraging experiments at CEA Saclay and Cornell University showed acceleration gradients of 20 MV/m and 25 MV/m in single and multicell structures. In an activity centered at DESY in Hamburg/Germany the TESLA collaboration is constructing a 500 MeV superconducting accelerator test facility (TTF) to demonstrate that a linear collider based on this technique can be built in a cost effective manner and that the necessary acceleration gradients of more than 15 MeV/m can be reached reproducibly. The test facility built at DESY covers an area of 3.000 m2 and is divided into 3 major activity areas: (1) The testlinac, where the performance ofthe modular components with an electron beam passing the 40 m long acceleration section can be demonstrated. (2) The test area, where all individual resonators are tested before installation into a module. (3) The preparation and assembly area, where assembly of cavities and modules take place. We report here on the design work to reach a reduction of costs compared to actual existing superconducting accelerator structures and on the facility set up to reach high acceleration gradients in

  3. Using TraFiC 4 to calculate and minimize emittance growth due to coherent synchrotron radiation

    NASA Astrophysics Data System (ADS)

    Kabel, A.; Dohlus, M.; Limberg, T.

    2000-11-01

    Coherent synchrotron radiation occurs when short bunches travel on strongly bent trajectories. Its effects on high-quality beams can be severe and are well understood qualitatively. For quantitative results, however, one has to rely on numerical methods. The recent interest in high quality, high-current electron beams has generated considerable efforts to understand and minimize the effects of CSR on beam quality. By now several simulation codes, utilizing different approaches and making different approximations, exist. We describe in some detail the coder TraFiC 4 developed at DESY for design and analysis purposes. It calculates the fields acting on the pariticles from first principles and tracks particles through them in the laboratory frame. We present calculational results for three applications and give some comparison with experimental data.

  4. An electron beam polarimeter based on scattering from a windowless, polarized hydrogen gas target

    NASA Astrophysics Data System (ADS)

    Bernauer, Jan; Milner, Richard

    2013-11-01

    Here we present the idea to develop a precision polarimeter for low energy, intense polarized electron beams using a windowless polarized hydrogen gas cell fed by an atomic beam source. This technique would use proven technology used successfully in both the electron scattering experiments: HERMES with 27 GeV electron and positron beams at DESY, and BLAST with 850 MeV electron beams at MIT-Bates. At 100 MeV beam energy, both spin-dependent Mo/ller and elastic electron-proton scattering processes have a high cross section and sizable spin asymmetries. The concept is described and estimates for realistic rates for elastic electron-proton scattering and Mo/ller scattering are presented. A number of important issues which affect the ultimate systematic uncertainty are identified.

  5. An electron beam polarimeter based on scattering from a windowless, polarized hydrogen gas target

    SciTech Connect

    Bernauer, Jan; Milner, Richard

    2013-11-07

    Here we present the idea to develop a precision polarimeter for low energy, intense polarized electron beams using a windowless polarized hydrogen gas cell fed by an atomic beam source. This technique would use proven technology used successfully in both the electron scattering experiments: HERMES with 27 GeV electron and positron beams at DESY, and BLAST with 850 MeV electron beams at MIT-Bates. At 100 MeV beam energy, both spin-dependent Mo/ller and elastic electron-proton scattering processes have a high cross section and sizable spin asymmetries. The concept is described and estimates for realistic rates for elastic electron-proton scattering and Mo/ller scattering are presented. A number of important issues which affect the ultimate systematic uncertainty are identified.

  6. More and more indirect signals for extra dimensions at more and more colliders

    SciTech Connect

    Rizzo, T.G.

    1999-06-01

    It has been recently suggested by Arkani-Hamed, Dimopoulos and Dvali that gravity may become strong at energies not far above the electroweak scale and thus remove the hierarchy problem. Such a scenario can be tested at both present and future accelerators since towers of Kaluza-Klein gravitons and associated scalar fields now play an important phenomenological role. In this paper we examine several processes for their sensitivity to a low scale for quantum gravity including deep inelastic ep scattering at DESY HERA, high precision low energy {nu}N scattering, Bhabha and Mo/ller scattering at linear colliders and both fermion and gluon pair production at {gamma}{gamma} colliders. {copyright} {ital 1999} {ital The American Physical Society}

  7. Thomson scattering from near-solid density plasmas using soft x-ray free electron lasers

    SciTech Connect

    Holl, A; Bornath, T; Cao, L; Doppner, T; Dusterer, S; Forster, E; Fortmann, C; Glenzer, S H; Gregori, G; Laarmann, T; Meiwes-Broer, K H; Przystawik, A; Radcliffe, P; Redmer, R; Reinholz, H; Ropke, G; Thiele, R; Tiggesbaumker, J; Toleikis, S; Truong, N X; Tschentscher, T; Uschmann, I; Zastrau, U

    2006-11-21

    We propose a collective Thomson scattering experiment at the VUV free electron laser facility at DESY (FLASH) which aims to diagnose warm dense matter at near-solid density. The plasma region of interest marks the transition from an ideal plasma to a correlated and degenerate many-particle system and is of current interest, e.g. in ICF experiments or laboratory astrophysics. Plasma diagnostic of such plasmas is a longstanding issue. The collective electron plasma mode (plasmon) is revealed in a pump-probe scattering experiment using the high-brilliant radiation to probe the plasma. The distinctive scattering features allow to infer basic plasma properties. For plasmas in thermal equilibrium the electron density and temperature is determined from scattering off the plasmon mode.

  8. Equilibration dynamics and conductivity of warm dense hydrogen

    NASA Astrophysics Data System (ADS)

    Zastrau, U.; Sperling, P.; Becker, A.; Bornath, T.; Bredow, R.; Döppner, T.; Dziarzhytski, S.; Fennel, T.; Fletcher, L. B.; Förster, E.; Fortmann, C.; Glenzer, S. H.; Göde, S.; Gregori, G.; Harmand, M.; Hilbert, V.; Holst, B.; Laarmann, T.; Lee, H. J.; Ma, T.; Mithen, J. P.; Mitzner, R.; Murphy, C. D.; Nakatsutsumi, M.; Neumayer, P.; Przystawik, A.; Roling, S.; Schulz, M.; Siemer, B.; Skruszewicz, S.; Tiggesbäumker, J.; Toleikis, S.; Tschentscher, T.; White, T.; Wöstmann, M.; Zacharias, H.; Redmer, R.

    2014-07-01

    We investigate subpicosecond dynamics of warm dense hydrogen at the XUV free-electron laser facility (FLASH) at DESY (Hamburg). Ultrafast impulsive electron heating is initiated by a ≤300-fs short x-ray burst of 92-eV photon energy. A second pulse probes the sample via x-ray scattering at jitter-free variable time delay. We show that the initial molecular structure dissociates within (0.9±0.2) ps, allowing us to infer the energy transfer rate between electrons and ions. We evaluate Saha and Thomas-Fermi ionization models in radiation hydrodynamics simulations, predicting plasma parameters that are subsequently used to calculate the static structure factor. A conductivity model for partially ionized plasma is validated by two-temperature density-functional theory coupled to molecular dynamic simulations and agrees with the experimental data. Our results provide important insights and the needed experimental data on transport properties of dense plasmas.

  9. European marketable grain legume seeds: Further insight into phenolic compounds profiles.

    PubMed

    Magalhães, Sara C Q; Taveira, Marcos; Cabrita, Ana R J; Fonseca, António J M; Valentão, Patrícia; Andrade, Paula B

    2017-01-15

    Twenty-nine mature raw varieties of grain legume seeds (chickpeas, field peas, faba beans, common vetch and lupins) produced in Europe were investigated for their phenolic profile by means of high performance liquid chromatography coupled to diode array detection (HPLC-DAD). To the best of our knowledge, this study reported for the first time the phenolic composition of mature raw seeds of chickpea type Desi, field pea and common vetch. Phenolic acids were predominant compounds in chickpeas, field peas and common vetch compared to flavonoids, whereas the opposite was observed for lupin seeds. Yellow lupins presented the highest levels of total phenolic compounds followed by narrow-leafed lupins (in average 960 and 679mg/kg, dry basis, respectively), whereas Kabuli chickpeas got the lowest ones (in average 47mg/kg, dry basis). Principal component analysis revealed that flavones and total levels of phenolic compounds were responsible for nearly 51% of total data variability.

  10. A vision unfulfilled: The hopeful birth and painful death of the Superconducting Super Collider

    NASA Astrophysics Data System (ADS)

    Riordan, Michael

    As Europe began to approach parity with the United States in high energy physics around 1980, US physicists were becoming increasingly concerned about the future of their national program. While Europeans were pushing ahead with ambitious plans for two advanced particle colliders, LEP at CERN and HERA at DESY, the United States found itself faced by knotty problems in manufacturing the 4-T superconducting magnets required for the new Isabelle proton-proton collider at Brookhaven [1]. Its ballooning costs, which had swelled from an initial 275 million to an estimated 600 million (and counting), threatened to drain funds from the rest of the high energy physics program, including at Fermilab and SLAC. And by mid-1982, it seemed likely that physicists doing research at CERN's new proton-antiproton collider would soon discover the massive W and Z particles predicted by the Standard Model, among Isabelle's primary targets...

  11. Oncogene KRAS activates fatty acid synthase, resulting in specific ERK and lipid signatures associated with lung adenocarcinoma.

    PubMed

    Gouw, Arvin M; Eberlin, Livia S; Margulis, Katherine; Sullivan, Delaney K; Toal, Georgia G; Tong, Ling; Zare, Richard N; Felsher, Dean W

    2017-04-11

    KRAS gene mutation causes lung adenocarcinoma. KRAS activation has been associated with altered glucose and glutamine metabolism. Here, we show that KRAS activates lipogenesis, and this activation results in distinct proteomic and lipid signatures. By gene expression analysis, KRAS is shown to be associated with a lipogenesis gene signature and specific induction of fatty acid synthase (FASN). Through desorption electrospray ionization MS imaging (DESI-MSI), specific changes in lipogenesis and specific lipids are identified. By the nanoimmunoassay (NIA), KRAS is found to activate the protein ERK2, whereas ERK1 activation is found in non-KRAS-associated human lung tumors. The inhibition of FASN by cerulenin, a small molecule antibiotic, blocked cellular proliferation of KRAS-associated lung cancer cells. Hence, KRAS is associated with activation of ERK2, induction of FASN, and promotion of lipogenesis. FASN may be a unique target for KRAS-associated lung adenocarcinoma remediation.

  12. Reconstruction and feature selection for desorption electrospray ionization mass spectroscopy imagery

    NASA Astrophysics Data System (ADS)

    Gao, Yi; Zhu, Liangjia; Norton, Isaiah; Agar, Nathalie Y. R.; Tannenbaum, Allen

    2014-03-01

    Desorption electrospray ionization mass spectrometry (DESI-MS) provides a highly sensitive imaging technique for differentiating normal and cancerous tissue at the molecular level. This can be very useful, especially under intra-operative conditions where the surgeon has to make crucial decision about the tumor boundary. In such situations, the time it takes for imaging and data analysis becomes a critical factor. Therefore, in this work we utilize compressive sensing to perform the sparse sampling of the tissue, which halves the scanning time. Furthermore, sparse feature selection is performed, which not only reduces the dimension of data from about 104 to less than 50, and thus significantly shortens the analysis time. This procedure also identifies biochemically important molecules for further pathological analysis. The methods are validated on brain and breast tumor data sets.

  13. PREFACE: 22nd International Congress on X-Ray Optics and Microanalysis

    NASA Astrophysics Data System (ADS)

    Falkenberg, Gerald; Schroer, Christian G.

    2014-04-01

    ICXOM22 The 22nd edition of the International Congress on X-ray Optics and Microanalysis (ICXOM 22) was held from 2-6 September 2013, in Hamburg, Germany. The congress was organized by scientists from DESY in collaboration with TU Dresden and Helmholtz-Zentrum Geesthacht, who also formed the scientific advisory board. The congress was hosted in the historical lecture hall building of the University of Hamburg located in the city center. ICXOM22 was attended by about 210 registered participants, including 67 students, and was open for listeners. The attendance was split between 26 countries (Germany 120, rest of Europe 57, America 20, Asia 8, Australia 6). The ICXOM series is a forum for the discussion of new developments in instrumentation, methods and applications in the fields of micro- and nano-analysis by means of X-ray beams. Following the trend of the last 10 years, the conference focusses more and more on synchrotron radiation rather than X-ray laboratory sources. Besides micro-beam X-ray fluorescence and absorption spectroscopy, different methods based on diffraction and full-field imaging were covered. Newly introduced to the ICXOM series was scanning coherent X-ray diffraction imaging, which was shown to evolve into a mature method for the imaging of nanostructures, defects and strain fields. New developments on fast X-ray detectors were discussed (Lambda, Maia) and advances in X-ray optics — like the generation of a sub 5nm point focus by Multilayer Zone plates — were presented. Talks on micro- and nano-analysis applications were distributed in special sessions on bio-imaging, Earth and environmental sciences, and Cultural heritage. The congress featured nine keynote and ten plenary talks, 56 talks in 14 parallel sessions and about 120 posters in three afternoon sessions. Seventeen commercial exhibitors exposed related X-ray instrumentation products, and two luncheon seminars on detector electronics were given. This allowed us to keep the student

  14. Executive Summary of the Workshop on Polarization and Beam Energy Measurements at the ILC

    SciTech Connect

    Aurand, B.; Bailey, I.; Bartels, C.; Blair, G.; Brachmann, A.; Clarke, J.; Deacon, L.; Duginov, V.; Ghalumyan, A.; Hartin, A.; Hauptman, J.; Helebrant, C.; Hesselbach, S.; Kafer, D.; List, J.; Lorenzon, W.; Lyapin, A.; Marchesini, I.; Melikian, R.; Monig, K.; Moeit, K.C.; /Bonn U. /Cockcroft Inst. Accel. Sci. Tech. /DESY /DESY, Zeuthen /Royal Holloway, U. of London /SLAC /Daresbury /Dubna, JINR /Yerevan Phys. Inst /Oxford U., JAI /Iowa State U. /Durham U., IPPP /Michigan U. /University Coll. London /Novosibirsk, IYF /Minsk, Inst. Phys. /Oregon U.

    2008-07-25

    This note summarizes the results of the 'Workshop on Polarization and Beam Energy Measurements at the ILC', held at DESY (Zeuthen) April 9-11 2008. The topics for the workshop included (1) physics requirements, (2) polarized sources and low energy polarimetry, (3) BDS polarimeters, (4) BDS energy spectrometers, and (5) physics-based measurements of beam polarization and beam energy from collider data. Discussions focused on the current ILC baseline program as described in the Reference Design Report (RDR), which includes physics runs at beam energies between 100 and 250 GeV, as well as calibration runs on the Z-pole. Electron polarization of P{sub e{sup -}} {approx}> 80% and positron polarization of P{sub e{sup +}} {approx}> 30% are part of the baseline configuration of the machine. Energy and polarization measurements for ILC options beyond the baseline, including Z-pole running and the 1 TeV energy upgrade, were also discussed.

  15. Joining Forces against the Dark Universe: New Results from Spectroscopic Surveys

    NASA Astrophysics Data System (ADS)

    Ho, Shirley

    2017-01-01

    Despite tremendous recent progress, gaps remain in our knowledge of our understanding of the Universe. We have not yet pinned down the properties of dark energy, nor have we confirmed Einstein's theory of Gravity at the largest scales.Current and upcoming large sky surveys of Large Scale Structure (LSS) in galaxies, quasars and Lyman-alpha forest present us with the best opportunity to understand properties of the Universe. I will first review recent cosmology results from Large Scale Structure, concentrating on BOSS and preliminary eBOSS results using Baryon Acoustic Oscillations and Redshift Space Distortions. I will then introduce novel cosmological probes which combine Cosmic Microwave Background with LSS directly. These novel probes will open new windows into the momentum field of the Universe and Gravity at the largest scales. I will finally put these into the context of upcoming surveys such as Dark Energy Spectroscopic Instrument (DESI), Wide Field Infrared Survey Telescope (WFIRST) and CMB S4.

  16. Inclusive production of dijets at the LHeC

    SciTech Connect

    Gay Ducati, M. B.; Griep, M. T.; Machado, M. V.

    2013-03-25

    We investigate the production of a quark-antiquark pair in inclusive photon-proton scattering, considering distinct gluon distribution functions. The role played by the parton saturation effects is studied for the kinematic regime of the upcoming Large Hadron Electron Collider (LHeC). This proposed lepton-hadron (nucleus) collider will reach energies higher than the available at DESY HERA experiment. This fact will open a new regime to probe the gluon and sea quark distributions in nucleon and on nucleus. In deep inelastic scattering in lepton-hadron colliders, events with two jets and the scattered proton in the final state are predicted to be observable, with an important contribution from charm production. Thus, the contribution from heavy quarks should be investigated in details.

  17. Measurement and simulation of two-phase CO2 cooling in Micromegas modules for a Large Prototype of Time Projection Chamber

    NASA Astrophysics Data System (ADS)

    Bhattacharya, D. S.; Attié, D.; Colas, P.; Mukhopadhyay, S.; Majumdar, N.; Bhattacharya, S.; Sarkar, S.; Bhattacharya, A.; Ganjour, S.

    2015-08-01

    The readout electronics of a Micromegas (MM) module consume nearly 26 W of electric power, which causes the temperature of electronic board to increase upto 70 oC. Increase in temperature results in damage of electronics. Development of temperature gradient in the Time Projection Chamber (TPC) may affect precise measurement as well. Two-phase CO2 cooling has been applied to remove heat from the MM modules during two test beam experiments at DESY, Hamburg. Following the experimental procedure, a comprehensive study of the cooling technique has been accomplished for a single MM module by means of numerical simulation. This paper is focused to discuss the application of two-phase CO2 cooling to keep the temperature below 30 oC and stabilized within 0.2 oC.

  18. Prompt-photon plus jet associated photoproduction at HERA in the parton Reggeization approach

    NASA Astrophysics Data System (ADS)

    Kniehl, B. A.; Nefedov, M. A.; Saleev, V. A.

    2014-06-01

    We study the photoproduction of isolated prompt photons associated with hadron jets in the framework of the parton Reggeization approach. The cross section distributions in the transverse energies and pseudorapidities of the prompt photon and the jet as well as the azimuthal-decorrelation variables measured by the H1 and ZEUS collaborations at DESY HERA are nicely described by our predictions. The main improvements with respect to previous studies in the kT-factorization framework include the application of the Reggeized-quark formalism, the generation of exactly gauge-invariant amplitudes with off-shell initial-state quarks, and the exact treatment of the γR→γg box contribution with off-shell initial-state gluons.

  19. Performance of 3-cell Seamless Niobium cavities

    SciTech Connect

    Kneisel, Peter K.; Ciovati, Gianluigi; Jelezov, I.; Singer, W.; Singer, X.

    2009-11-01

    In the last several months we have surface treated and cryogenically tested three TESLA-type 3-cell cavities, which had been manufactured at DESY as seamless assemblies by hydroforming. The cavities were completed at JLab with beam tube/flange assemblies. All three cavities performed very well after they had been post-purified with titanium at 1250C for 3 hrs. The cavities, two of which consisted of an end cell and 2 center cells and one was a center cell assembly, achieved gradients of Eacc = 32 MV/m, 34 MV/m and 35 MV/m without quenches. The performance was limited by the appearance of the “Q-drop” in the absence of field emission. This contribution reports about the various measurements undertaken with these cavities.

  20. Direct Detection of Pharmaceuticals and Personal Care Products from Aqueous Samples with Thermally-Assisted Desorption Electrospray Ionization Mass Spectrometry

    NASA Astrophysics Data System (ADS)

    Campbell, Ian S.; Ton, Alain T.; Mulligan, Christopher C.

    2011-07-01

    An ambient mass spectrometric method based on desorption electrospray ionization (DESI) has been developed to allow rapid, direct analysis of contaminated water samples, and the technique was evaluated through analysis of a wide array of pharmaceutical and personal care product (PPCP) contaminants. Incorporating direct infusion of aqueous sample and thermal assistance into the source design has allowed low ppt detection limits for the target analytes in drinking water matrices. With this methodology, mass spectral information can be collected in less than 1 min, consuming ~100 μL of total sample. Quantitative ability was also demonstrated without the use of an internal standard, yielding decent linearity and reproducibility. Initial results suggest that this source configuration is resistant to carryover effects and robust towards multi-component samples. The rapid, continuous analysis afforded by this method offers advantages in terms of sample analysis time and throughput over traditional hyphenated mass spectrometric techniques.

  1. Synthesis from Design Requirements of a Hybrid System for Transport Aircraft Longitudinal Control. Volume 2

    NASA Technical Reports Server (NTRS)

    Hynes, Charles S.; Hardy, Gordon H.; Sherry, Lance

    2007-01-01

    Volume I of this report presents a new method for synthesizing hybrid systems directly from desi gn requirements, and applies the method to design of a hybrid system for longitudinal control of transport aircraft. The resulting system satisfies general requirement for safety and effectiveness specified a priori, enabling formal validation to be achieved. Volume II contains seven appendices intended to make the report accessible to readers with backgrounds in human factors, flight dynamics and control, and formal logic. Major design goals are (1) system design integrity based on proof of correctness at the design level, (2) significant simplification and cost reduction in system development and certification, and (3) improved operational efficiency, with significant alleviation of human-factors problems encountered by pilots in current transport aircraft. This report provides for the first time a firm technical basis for criteria governing design and certification of avionic systems for transport aircraft. It should be of primary interest to designers of next-generation avionic systems.

  2. Digital signal processing for the ATLAS/LUCID detector

    SciTech Connect

    2015-07-01

    Both the detector and the associated read-out electronics have been improved in order to cope with the LHC luminosity increase foreseen for RUN 2 and RUN 3. The new operating conditions require a careful tuning of the read-out electronics in order to optimize the signal-to-noise ratio. The new read-out electronics will allow the use of digital filtering of the photo multiplier tube signals. In this talk, we will present the first results that we obtained in the optimization of the signal-to-noise ratio. In addition, we will introduce the next steps to adapt this system to high performance read-out chains for low energy gamma rays. Such systems are based, for instance, on Silicon Drift Detector devices and can be used in applications at Free-Electron-Laser facilities such as the XFEL under construction at DESY. (authors)

  3. CRPropa 2.0 - A public framework for propagating high energy nuclei, secondary gamma rays and neutrinos

    NASA Astrophysics Data System (ADS)

    Kampert, Karl-Heinz; Kulbartz, Jörg; Maccione, Luca; Nierstenhoefer, Nils; Schiffer, Peter; Sigl, Günter; van Vliet, Arjen René

    2013-02-01

    Version 2.0 of CRPropa [CRPropa is published under the 3rd version of the GNU General Public License (GPLv3). It is available, together with a detailed documentation of the code, at https://crpropa.desy.de.] is public software to model the extra-galactic propagation of ultra-high energy nuclei of atomic number Z⩽26 through structured magnetic fields and ambient photon backgrounds taking into account all relevant particle interactions. CRPropa covers the energy range 7×1016

  4. Mechanical stability study of capture cavity II at Fermilab

    SciTech Connect

    McGee, M.W.; Pischalnikov, Y.; /Fermilab

    2007-06-01

    Problematic resonant conditions at both 18 Hz and 180 Hz were encountered and identified early during the commissioning of Capture Cavity II (CC2) at Fermilab. CC2 consists of an external vacuum vessel and a superconducting high gradient (close to 25 MV/m) 9-cell 1.3 GHz niobium cavity, transported from DESY for use in the A0 Photoinjector at Fermilab. An ANSYS modal finite element analysis (FEA) was performed in order to isolate the source of the resonance and directed the effort towards stabilization. Using a fast piezoelectric tuner to excite (or shake) the cavity at different frequencies (from 5 Hz to 250 Hz) at a low-range sweep for analysis purposes. Both warm (300 K) and cold (1.8 K) accelerometer measurements at the cavity were taken as the resonant ''fix'' was applied. FEA results, cultural and technical noise investigation, and stabilization techniques are discussed.

  5. Investigations of large x-ray optics for free electron lasers

    NASA Astrophysics Data System (ADS)

    Stormer, Michael; Liard-Cloup, Audrey; Felten, Frank; Jacobi, Sandra; Steeg, Barbara; Feldhaus, Josef; Bormann, Rudiger

    2004-10-01

    A free electron laser (FEL) is being set up at DESY (Deutsches Elektronen Synchrotron, Hamburg, Germany). In the current XUV range of the FEL, total-reflection X-ray mirrors are needed for beam guidance, beam alignment, and monochromatisation. Such X-ray optics are used at a grazing incidence angle of about 2° thus a maximum length of about 500 mm is required. Due to the working range of the FEL (50 - 200 eV), carbon has been selected as a suitable material with an absorption edge at 284 eV. The amorphous carbon coatings were manufactured by magnetron sputtering in a special UHV system for large deposition at GKSS research centre (Geesthacht, Germany). The variation in film thickness over the whole length has been investigated by X-ray reflectometry (XRR). Good uniformity (better than 2 %) and low roughness (< 0.5 nm) have been observed.

  6. A compact and low-weight sputtering unit for in situ investigations of thin film growth at synchrotron radiation beamlines.

    PubMed

    Walter, P; Dippel, A-C; Pflaum, K; Wernecke, J; van den Hurk, J; Blume, J; Klemradt, U

    2015-05-01

    In this work, we report on a highly variable, compact, and light high-vacuum sputter deposition unit designed for in situ experiments using synchrotron radiation facilities. The chamber can be mounted at various synchrotron beamlines for scattering experiments in grazing incidence geometry. The sample position and the large exit window allow to perform x-ray experiments up to large q values. The sputtering unit is easy to mount on existing experimental setups and can be remote-controlled. In this paper, we describe in detail the design and the performance of the new sputtering chamber and present the installation of the apparatus at different 3rd generation light sources. Furthermore, we describe the different measurement options and present some selected results. The unit has been successfully commissioned and is now available for users at PETRA III at DESY.

  7. Probing small parton densities in ultraperipheral A A and pA collisions at the CERN large Hadron Collider.

    PubMed

    Strikman, Mark; Vogt, Ramona; White, Sebastian

    2006-03-03

    We calculate photoproduction rates for several hard processes in ultraperipheral proton-lead and lead-lead collisions at the CERN Large Hadron Collider (LHC) with square root of sNN = 8.8 and 5.5 TeV, respectively, which could be triggered in the large LHC detectors. We use ATLAS as an example. The lead ion is treated as a source of (coherently produced) photons with energies and intensities greater than those of equivalent ep collisions at the DESY collider HERA. We find very large rates for both inclusive and diffractive production that will extend the HERA x range by nearly an order of magnitude for similar virtualities. We demonstrate that it is possible to reach the kinematic regime where nonlinear effects are larger than at HERA.

  8. The silicon vertex detector of HERA-B

    SciTech Connect

    Moshous, Basil

    1998-02-01

    HERA-B is an experiment to study CP violation in the B system using an internal target at the DESY HERA proton ring(820 GeV). The main goal is to measure the asymmetry in the 'gold plated' decays of B{sup 0}, B-bar{sup 0}{yields}J/{psi}K{sub s}{sup 0} yielding a measurement of the angle {beta} of the unitarity triangle. From the semileptonic decay channels of the b, b-bar-hadron produced in association with the B{sup 0},B-bar{sup 0} can be used to tag the flavor of the B{sup 0}. The purpose of the Vertex Detector System is to provide the track coordinates for reconstructing the J/{psi}{yields}e{sup +}e{sup -}, {mu}{sup +}{mu}{sup -} secondary decay vertices and the impact parameters of all tagging particles.

  9. The N* Program at Jefferson Lab - Status and Prospects

    SciTech Connect

    Volker Burkert

    2002-07-01

    I discuss recent results on the electroproduction and photoproduction of mesons in the region of non-strange baryon resonances. Results on the quadrupole transition from the ground state nucleon to the Delta show the importance of the nucleon pion cloud. The excitation of the ''Roper'' N{sub 1/2}{sup +}(1440) is being studied in single pion production, and the excitation of the lowest negative parity state N{sub 1/2}{sup -}(1535) is studied in the p{eta} and in the N{pi} channels. First results on electroproduction of p{pi}{sup +}{pi}{sup -} show intriguing resonance structure which seems difficult to explain using known baryon resonance properties. Searches for resonances in KY* and in p{omega} channels also reveal resonance-like behavior. I briefly address a new avenue of N* physics using exclusive deeply virtual Compton scattering, recently measured for the first time at JLAB and at DESY.

  10. Heavy quark production in photon-Pomeron interactions at high energies

    SciTech Connect

    Machado, M. M.; Goncalves, V. P.

    2013-03-25

    The diffractive heavy quark cross sections are estimated considering photon-Pomeron interactions in hadron - hadron at RHIC, Tevatron, and CERN LHC energies. We assume the validity of the hard diffractive factorization and calculate the charm and bottom total cross sections and rapidity distributions using the diffractive parton distribution functions of the Pomeron obtained by the H1 Collaboration at DESY-HERA. Such processes are sensitive to the gluon content of the Pomeron at high energies and are a good place to constrain the behavior of this distribution. We also compare our predictions with those obtained using the dipole model, and verify that these processes are a good test of the different mechanisms for heavy quarks diffractive production at hadron colliders.

  11. OLYMPUS and the proton form factor puzzle

    NASA Astrophysics Data System (ADS)

    Ice, Lauren; Alarcon, Ricardo; Olympus Collaboration

    2012-02-01

    Recent measurements of the proton electric to magnetic form factor ratio using polarization techniques reveal a large discrepancy with measurements found using the Rosenbluth separation technique. It has been proposed that this discrepancy is due to a non-negligible multiple photon exchange contribution in the electron-proton elastic scattering cross section. The OLYMPUS experiment will measure the multiple photon exchange contribution by finding the cross section ratio of positron-proton to electron-proton scattering within 1%. The experiment will be carried out at the DESY laboratory in Hamburg Germany using the electron and positron storage ring DORIS and an internal unpolarized hydrogen gas target. The scattered particles will be detected using the Bates Large Acceptance Spectrometer Toroid (BLAST).

  12. Simultaneous operation of two soft x-ray free-electron lasers driven by one linear accelerator

    SciTech Connect

    Faatz, B.; Plönjes, E.; Ackermann, S.; Agababyan, A.; Asgekar, V.; Ayvazyan, V.; Baark, S.; Baboi, N.; Balandin, V.; Bargen, N. von; Bican, Y.; Bilani, O.; Bödewadt, J.; Böhnert, M.; Böspflug, R.; Bonfigt, S.; Bolz, H.; Borges, F.; Borkenhagen, O.; Brachmanski, M.; Braune, M.; Brinkmann, A.; Brovko, O.; Bruns, T.; Castro, P.; Chen, J.; Czwalinna, M. K.; Damker, H.; Decking, W.; Degenhardt, M.; Delfs, A.; Delfs, T.; Deng, H.; Dressel, M.; Duhme, H-T; Düsterer, S.; Eckoldt, H.; Eislage, A.; Felber, M.; Feldhaus, J.; Gessler, P.; Gibau, M.; Golubeva, N.; Golz, T.; Gonschior, J.; Grebentsov, A.; Grecki, M.; Grün, C.; Grunewald, S.; Hacker, K.; Hänisch, L.; Hage, A.; Hans, T.; Hass, E.; Hauberg, A.; Hensler, O.; Hesse, M.; Heuck, K.; Hidvegi, A.; Holz, M.; Honkavaara, K.; Höppner, H.; Ignatenko, A.; Jäger, J.; Jastrow, U.; Kammering, R.; Karstensen, S.; Kaukher, A.; Kay, H.; Keil, B.; Klose, K.; Kocharyan, V.; Köpke, M.; Körfer, M.; Kook, W.; Krause, B.; Krebs, O.; Kreis, S.; Krivan, F.; Kuhlmann, J.; Kuhlmann, M.; Kube, G.; Laarmann, T.; Lechner, C.; Lederer, S.; Leuschner, A.; Liebertz, D.; Liebing, J.; Liedtke, A.; Lilje, L.; Limberg, T.; Lipka, D.; Liu, B.; Lorbeer, B.; Ludwig, K.; Mahn, H.; Marinkovic, G.; Martens, C.; Marutzky, F.; Maslocv, M.; Meissner, D.; Mildner, N.; Miltchev, V.; Molnar, S.; Mross, D.; Müller, F.; Neumann, R.; Neumann, P.; Nölle, D.; Obier, F.; Pelzer, M.; Peters, H-B; Petersen, K.; Petrosyan, A.; Petrosyan, G.; Petrosyan, L.; Petrosyan, V.; Petrov, A.; Pfeiffer, S.; Piotrowski, A.; Pisarov, Z.; Plath, T.; Pototzki, P.; Prandolini, M. J.; Prenting, J.; Priebe, G.; Racky, B.; Ramm, T.; Rehlich, K.; Riedel, R.; Roggli, M.; Röhling, M.; Rönsch-Schulenburg, J.; Rossbach, J.; Rybnikov, V.; Schäfer, J.; Schaffran, J.; Schlarb, H.; Schlesselmann, G.; Schlösser, M.; Schmid, P.; Schmidt, C.; Schmidt-Föhre, F.; Schmitz, M.; Schneidmiller, E.; Schöps, A.; Scholz, M.; Schreiber, S.; Schütt, K.; Schütz, U.; Schulte-Schrepping, H.; Schulz, M.; Shabunov, A.; Smirnov, P.; Sombrowski, E.; Sorokin, A.; Sparr, B.; Spengler, J.; Staack, M.; Stadler, M.; Stechmann, C.; Steffen, B.; Stojanovic, N.; Sychev, V.; Syresin, E.; Tanikawa, T.; Tavella, F.; Tesch, N.; Tiedtke, K.; Tischer, M.; Treusch, R.; Tripathi, S.; Vagin, P.; Vetrov, P.; Vilcins, S.; Vogt, M.; Wagner, A. de Zubiaurre; Wamsat, T.; Weddig, H.; Weichert, G.; Weigelt, H.; Wentowski, N.; Wiebers, C.; Wilksen, T.; Willner, A.; Wittenburg, K.; Wohlenberg, T.; Wortmann, J.; Wurth, W.; Yurkov, M.; Zagorodnov, I.; Zemella, J.

    2016-06-20

    Extreme-ultraviolet to x-ray free-electron lasers (FELs) in operation for scientific applications are up to now single-user facilities. While most FELs generate around 100 photon pulses per second, FLASH at DESY can deliver almost two orders of magnitude more pulses in this time span due to its superconducting accelerator technology. This makes the facility a prime candidate to realize the next step in FELs—dividing the electron pulse trains into several FEL lines and delivering photon pulses to several users at the same time. Hence, FLASH has been extended with a second undulator line and self-amplified spontaneous emission (SASE) is demonstrated in both FELs simultaneously. Here, FLASH can now deliver MHz pulse trains to two user experiments in parallel with individually selected photon beam characteristics. First results of the capabilities of this extension are shown with emphasis on independent variation of wavelength, repetition rate, and photon pulse length.

  13. Quark fragmentation to π±, π0, K±, p and p¯ in the nuclear environment

    NASA Astrophysics Data System (ADS)

    Airapetian, A.; Akopov, N.; Akopov, Z.; Amarian, M.; Ammosov, V. V.; Andrus, A.; Aschenauer, E. C.; Augustyniak, W.; Avakian, R.; Avetissian, A.; Avetissian, E.; Bailey, P.; Baturin, V.; Baumgarten, C.; Beckmann, M.; Belostotski, S.; Bernreuther, S.; Bianchi, N.; Blok, H. P.; Böttcher, H.; Borissov, A.; Borysenko, A.; Bouwhuis, M.; Brack, J.; Brüll, A.; Bryzgalov, V.; Capitani, G. P.; Chiang, H. C.; Ciullo, G.; Contalbrigo, M.; Dalpiaz, P. F.; de Leo, R.; de Nardo, L.; de Sanctis, E.; Devitsin, E.; di Nezza, P.; Düren, M.; Ehrenfried, M.; Elalaoui-Moulay, A.; Elbakian, G.; Ellinghaus, F.; Elschenbroich, U.; Ely, J.; Fabbri, R.; Fantoni, A.; Fechtchenko, A.; Felawka, L.; Fox, B.; Franz, J.; Frullani, S.; Gapienko, G.; Gapienko, V.; Garibaldi, F.; Garrow, K.; Garutti, E.; Gaskell, D.; Gavrilov, G.; Gharibyan, V.; Graw, G.; Grebeniouk, O.; Greeniaus, L. G.; Gregor, I. M.; Hafidi, K.; Hartig, M.; Hasch, D.; Heesbeen, D.; Henoch, M.; Hertenberger, R.; Hesselink, W. H. A.; Hillenbrand, A.; Hoek, M.; Holler, Y.; Hommez, B.; Iarygin, G.; Ivanilov, A.; Izotov, A.; Jackson, H. E.; Jgoun, A.; Kaiser, R.; Kinney, E.; Kisselev, A.; Königsmann, K.; Kopytin, M.; Korotkov, V.; Kozlov, V.; Krauss, B.; Krivokhijine, V. G.; Lagamba, L.; Lapikás, L.; Laziev, A.; Lenisa, P.; Liebing, P.; Lindemann, T.; Lipka, K.; Lorenzon, W.; Lu, J.; Maiheu, B.; Makins, N. C. R.; Marianski, B.; Marukyan, H.; Masoli, F.; Mexner, V.; Meyners, N.; Mikloukho, O.; Miller, C. A.; Miyachi, Y.; Muccifora, V.; Nagaitsev, A.; Nappi, E.; Naryshkin, Y.; Nass, A.; Negodaev, M.; Nowak, W.-D.; Oganessyan, K.; Ohsuga, H.; Pickert, N.; Potashov, S.; Potterveld, D. H.; Raithel, M.; Reggiani, D.; Reimer, P. E.; Reischl, A.; Reolon, A. R.; Riedl, C.; Rith, K.; Rosner, G.; Rostomyan, A.; Rubacek, L.; Ryckbosch, D.; Salomatin, Y.; Sanjiev, I.; Savin, I.; Scarlett, C.; Schäfer, A.; Schill, C.; Schnell, G.; Schüler, K. P.; Schwind, A.; Seele, J.; Seidl, R.; Seitz, B.; Shanidze, R.; Shearer, C.; Shibata, T.-A.; Shutov, V.; Simani, M. C.; Sinram, K.; Stancari, M.; Statera, M.; Steffens, E.; Steijger, J. J. M.; Stenzel, H.; Stewart, J.; Stösslein, U.; Tait, P.; Tanaka, H.; Taroian, S.; Tchuiko, B.; Terkulov, A.; Tkabladze, A.; Trzcinski, A.; Tytgat, M.; Vandenbroucke, A.; van der Nat, P.; van der Steenhoven, G.; Vetterli, M. C.; Vikhrov, V.; Vincter, M. G.; Vogel, C.; Vogt, M.; Volmer, J.; Weiskopf, C.; Wendland, J.; Wilbert, J.; Ybeles Smit, G.; Yen, S.; Zihlmann, B.; Zohrabian, H.; Zupranski, P.; Hermes Collaboration

    2003-12-01

    The influence of the nuclear medium on lepto-production of hadrons was studied in the HERMES experiment at DESY in semi-inclusive deep-inelastic scattering of 27.6 GeV positrons off deuterium, nitrogen and krypton targets. The differential multiplicity for krypton relative to that of deuterium has been measured for the first time for various identified hadrons (π+, π-, π0, K+, K-, p and p¯) as a function of the virtual photon energy ν, the fraction z of this energy transferred to the hadron, and the hadron transverse momentum squared pt2. The multiplicity ratio is strongly reduced in the nuclear medium at low ν and high z, with significant differences among the various hadrons. The distribution of the hadron transverse momentum is broadened towards high pt2 in the nuclear medium, in a manner resembling the Cronin effect previously observed in collisions of heavy ions and protons with nuclei.

  14. DATA REVIEW: A compilation of data on hadronic total cross sections in e+e- interactions

    NASA Astrophysics Data System (ADS)

    Whalley, M. R.

    2003-12-01

    A comprehensive compilation of experimental data on total hadronic cross sections, and R ratios, in e+e- interactions is presented. Published data from the Novosibirsk, Orsay, Frascati, SLAC, CORNELL, DESY, KEK and CERN e+e- colliders on both exclusive and inclusive final particle states are included from threshold energies to the highest LEP energies. The data are presented in tabular form supplemented by compilation plots of different exclusive final particle states and of different energy regions. All the data in this review, together with data on a wide variety of other reactions, can be found in, and retrieved from, the Durham HEP Databases on the World Wide Web http://durpdg.dur.ac.uk/HEPDATA.

  15. A compact and low-weight sputtering unit for in situ investigations of thin film growth at synchrotron radiation beamlines

    SciTech Connect

    Walter, P.; Dippel, A.-C.; Pflaum, K.; Wernecke, J.; Blume, J.; Hurk, J. van den; Klemradt, U.

    2015-05-15

    In this work, we report on a highly variable, compact, and light high-vacuum sputter deposition unit designed for in situ experiments using synchrotron radiation facilities. The chamber can be mounted at various synchrotron beamlines for scattering experiments in grazing incidence geometry. The sample position and the large exit window allow to perform x-ray experiments up to large q values. The sputtering unit is easy to mount on existing experimental setups and can be remote-controlled. In this paper, we describe in detail the design and the performance of the new sputtering chamber and present the installation of the apparatus at different 3rd generation light sources. Furthermore, we describe the different measurement options and present some selected results. The unit has been successfully commissioned and is now available for users at PETRA III at DESY.

  16. A compact and low-weight sputtering unit for in situ investigations of thin film growth at synchrotron radiation beamlines

    NASA Astrophysics Data System (ADS)

    Walter, P.; Dippel, A.-C.; Pflaum, K.; Wernecke, J.; van den Hurk, J.; Blume, J.; Klemradt, U.

    2015-05-01

    In this work, we report on a highly variable, compact, and light high-vacuum sputter deposition unit designed for in situ experiments using synchrotron radiation facilities. The chamber can be mounted at various synchrotron beamlines for scattering experiments in grazing incidence geometry. The sample position and the large exit window allow to perform x-ray experiments up to large q values. The sputtering unit is easy to mount on existing experimental setups and can be remote-controlled. In this paper, we describe in detail the design and the performance of the new sputtering chamber and present the installation of the apparatus at different 3rd generation light sources. Furthermore, we describe the different measurement options and present some selected results. The unit has been successfully commissioned and is now available for users at PETRA III at DESY.

  17. Effects of gamma irradiation on chickpea seeds vis-a-vis total seed storage proteins, antioxidant activity and protein profiling.

    PubMed

    Bhagyawant, S S; Gupta, N; Shrivastava, N

    2015-10-23

    The present work describes radiation—induced effects on seed composition vis—à—vis total seed proteins, antioxidant levels and protein profiling employing two dimensional gel electrophoresis (2D—GE) in kabuli and desi chickpea varities. Seeds were exposed to the radiation doses of 1,2,3,4 and 5 kGy. The total protein concentrations decreased and antioxidant levels were increased with increasing dose compared to control seed samples. Radiation induced effects were dose dependent to these seed parameters while it showed tolerance to 1 kGy dose. Increase in the dose was complimented with increase in antioxidant levels, like 5 kGy enhanced % scavenging activities in all the seed extracts. Precisely, the investigations reflected that the dose range from 2 to 5 kGy was effective for total seed storage proteins, as depicted quantitatively and qualitative 2D—GE means enhance antioxidant activities in vitro.

  18. Transmission-mode direct analysis in real time and desorption electrospray ionization mass spectrometry of insecticide-treated bednets for malaria control.

    PubMed

    Pérez, José J; Harris, Glenn A; Chipuk, Joseph E; Brodbelt, Jennifer S; Green, Michael D; Hampton, Christina Y; Fernández, Facundo M

    2010-04-01

    Transmission-mode direct analysis in real time (TM-DART) is presented as an alternative sampling strategy to traditional methods of sample introduction for DART MS analysis. A custom-designed sample holder was fabricated to rapidly and reproducibly position insecticide-treated nets normal to the ionizing metastable gas stream, enabling transmission of desorbed analyte ions through the holder cavity and into the MS. Introduction of the sample at this fixed geometry eliminates the need for optimizing sample position and allows spectra based on factors such as metastable gas temperature and flow to be systematically evaluated. The results presented here, supported by computational fluid dynamic simulations, demonstrate the effects of these factors on the resulting mass spectra and the potential of this sampling strategy to be used for qualitative and quantitative analyses. Transmission-mode desorption electrospray ionization (TM-DESI) experiments on similar insecticide-treated nets were performed for comparison purposes.

  19. Tanker Avionics/Aircrew Complement Evaluation (TAACE). Phase I. Simulation Evaluation. Volume I. Results

    DTIC Science & Technology

    1981-11-01

    This report docUlmenllt s a Com kp i t s i 11l11 at ion1 study conduc ted to va 1 i datc tile pilot oseab i Iity of’ a 3-man (pilot, copilot, bOoml...ockup studies inl whi ich the Crew usa i /ceta iivof* the three or igCinalI desi gns was assessed. Wh ile all threce des ignis remla i ned res poi is...new Iocatoi 3’ ’ utut art I nl,4 Iv tol"I1ht Figure 6. Boom Operatoru% All Station 10 L4 so that the boom operator could spend more time in full contact

  20. Cryogenics for the superconducting super collider: workshop proceedings

    SciTech Connect

    Not Available

    1984-01-01

    Attendance at the workshop and information meeting on Cryogenics for the SSC held at Brookhaven National Laboratory on January 17 to 19, 1984 consisted of 109 engineers and scientists from 19 industrial organizations and 18 laboratories and universities - CERN, DESY, Grenoble, KEK and Saclay were represented. About one-third of the participants were from Brookhaven National Laboratory and Fermi National Laboratory. Talks which concentrated on informing the audience of the present status of the SSC research and development activities and progress towards design of the components were given, experience with the cryogenic system of the Tevatron was reported, and a wrap-up session was held on the last day where each of the five workshop leaders gave a summary of their group's discussions and conclusions. A brief summary of these presentations is given, with the detailed information gathered by the group leaders forming the bulk of these proceedings.

  1. Soft x-ray scattering using FEL radiation for probing near-solid density plasmas at few electronvolt temperatures

    SciTech Connect

    Toleikis, S; Faustlin, R R; Cao, L; Doppner, T; Dusterer, S; Forster, E; Fortmann, C; Glenzer, S H; Gode, S; Gregori, G; Irsig, R; Laarmann, T; Lee, H J; Li, B; Meiwes-Broer, K; Przystawik, A; Radcliffe, P; Redmer, R; Tavella, F; Thiele, R; Tiggesbaumker, J; Truong, N X; Uschmann, I; Zastrau, U; Tschentscher, T

    2009-03-03

    We report on soft x-ray scattering experiments on cryogenic hydrogen and simple metal targets. As a source of intense and ultrashort soft x-ray pulses we have used free-electron laser radiation at 92 eV photon energy from FLASH at DESY, Hamburg. X-ray pulses with energies up to 100 {micro}J and durations below 50 fs provide interaction with the target leading simultaneously to plasma formation and scattering. Experiments exploiting both of these interactions have been carried out, using the same experimental setup. Firstly, recording of soft x-ray inelastic scattering from near-solid density hydrogen plasmas at few electronvolt temperatures confirms the feasibility of this diagnostics technique. Secondly, the soft x-ray excitation of few electronvolt solid-density plasmas in simple metals could be studied by recording soft x-ray line and continuum emission integrated over emission times from fs to ns.

  2. A Tony Thomas-Inspired Guide to INSPIRE

    SciTech Connect

    O'Connell, Heath B.; /Fermilab

    2010-04-01

    The SPIRES database was created in the late 1960s to catalogue the high energy physics preprints received by the SLAC Library. In the early 1990s it became the first database on the web and the first website outside of Europe. Although indispensible to the HEP community, its aging software infrastructure is becoming a serious liability. In a joint project involving CERN, DESY, Fermilab and SLAC, a new database, INSPIRE, is being created to replace SPIRES using CERN's modern, open-source Invenio database software. INSPIRE will maintain the content and functionality of SPIRES plus many new features. I describe this evolution from the birth of SPIRES to the current day, noting that the career of Tony Thomas spans this timeline.

  3. Micro-strip metal detector for the beam profile monitoring

    NASA Astrophysics Data System (ADS)

    Pugatch, V.; Borysova, M.; Mykhailenko, A.; Fedorovitch, O.; Pylypchenko, Y.; Perevertaylo, V.; Franz, H.; Wittenburg, K.; Schmelling, M.; Bauer, C.

    2007-10-01

    The Micro-strip Metal Detector (MMD) design and production technology, readout electronics as well as areas of applications are described. The MMD was designed for beam profile monitoring of charged particle and synchrotron radiation beams. Using photolithography and plasma-chemistry etching technologies we succeeded in creating detectors with a metal strip's thickness of less than 2 μm and without any other materials in the working area. The principle of operation is based on the Secondary Electron Emission (SEE). The results obtained with the MMD at the monochromatic synchrotron radiation beam at HASYLAB (DESY) are also presented. The current version of the MMD allows measuring a beam profile and position with an accuracy of 20 μm.

  4. Studies on GEM modules for a Large Prototype TPC for the ILC

    NASA Astrophysics Data System (ADS)

    Tsionou, Dimitra

    2017-02-01

    The International Linear Collider (ILC) is a future electron-positron collider with centre of mass energy of 500-1000 GeV. The International Large Detector (ILD) is one of two detector concepts at the ILC. Its high precision tracking system consists of Silicon sub-detectors and a Time Projection Chamber (TPC) equipped with micro-pattern gas detectors (MPGDs). Within the framework of the LCTPC collaboration, a Large Prototype (LP) TPC has been built as a demonstrator. This prototype has been equipped with Gas Electron Multiplier (GEM) modules and studied with electron beams of energies 1-6 GeV at the DESY test beam facility. The performance of the prototype detector and the extrapolation to the ILD TPC is presented here. In addition, ongoing optimisation studies and R&D activities in order to prepare the next GEM module iteration are discussed.

  5. Next-to-leading-order QCD corrections to jet cross sections and jet rates in deeply inelastic electron-proton scattering

    SciTech Connect

    Graudenz, D. )

    1994-04-01

    Jet cross sections in deeply inelastic scattering in the case of transverse photon exchange for the production of (1+1) and (2+1) jets are calculated in next-to-leading-order QCD (here the +1'' stands for the target remnant jet, which is included in the jet definition). The jet definition scheme is based on a modified JADE cluster algorithm. The calculation of the (2+1) jet cross section is described in detail. Results for the virtual corrections as well as for the real initial- and final-state corrections are given explicitly. Numerical results are stated for jet cross sections as well as for the ratio [sigma][sub (2+1) jet]/[sigma][sub tot] that can be expected at E665 and DESY HERA. Furthermore the scale ambiguity of the calculated jet cross sections is studied and different parton density parametrizations are compared.

  6. The Simulation Intranet Architecture

    SciTech Connect

    Holmes, V.P.; Linebarger, J.M.; Miller, D.J.; Vandewart, R.L.

    1998-12-02

    The Simdarion Infranet (S1) is a term which is being used to dcscribc one element of a multidisciplinary distributed and distance computing initiative known as DisCom2 at Sandia National Laboratory (http ct al. 1998). The Simulation Intranet is an architecture for satisfying Sandia's long term goal of providing an end- to-end set of scrviccs for high fidelity full physics simu- lations in a high performance, distributed, and distance computing environment. The Intranet Architecture group was formed to apply current distributed object technologies to this problcm. For the hardware architec- tures and software models involved with the current simulation process, a CORBA-based architecture is best suited to meet Sandia's needs. This paper presents the initial desi-a and implementation of this Intranct based on a three-tier Network Computing Architecture(NCA). The major parts of the architecture include: the Web Cli- ent, the Business Objects, and Data Persistence.

  7. The high performance readout chain for the DSSC 1Megapixel detector, designed for high throughput during pulsed operation mode

    NASA Astrophysics Data System (ADS)

    Kirchgessner, M.; Soldat, J.; Kugel, A.; Donato, M.; Porro, M.; Fischer, P.

    2015-01-01

    The readout chain of the DSSC 1M pixel detector currently built at DESY, Hamburg for the European X-Ray Free Electron Laser is described. The system operates in pulsed operation mode comparable to the new ILC. Each 0.1 seconds 800 images of 1M pixels are produced and readout by the DSSC DAQ electronics. The total data production rate of the system is about 134 Gbit/s. In order to deal with the high data rates, latest technology components like the Xilinx Kintex 7 FPGA are used to implement fast DDR3-1600 image buffers, high speed serial FPGA to FPGA communication and 10 GB Ethernet links concentrated in one 40 Gbit/s QSFP+ transceiver.

  8. Development of Quiet Honeycomb Panels

    NASA Technical Reports Server (NTRS)

    Palumbo, Daniel L.; Klos, Jacob

    2009-01-01

    Sandwich honeycomb composite panels are lightweight and strong, and, therefore, provide a reasonable alternative to the aluminum ring framelstringer architecture currently used for most aircraft airframes. The drawback to honeycomb panels is that they radiate noise into the aircraft cabin very efficiently provoking the need for additional sound treatment which adds weight and reduces the material's cost advantage. A series of honeycomb panels were made which incorporated different design strategies aimed at reducing the honeycomb panels' radiation efficiency while at the same time maintaining its strength. The majority of the desi gns were centered around the concept of creatin g areas of reduced stiffness in the panel by adding voids and recesses to the core. The effort culminated with a reinforced./recessed panel which had 6 dB higher transmission loss than the baseline solid core panel while maintaining comparable strength.

  9. Shot noise startup of the 6 NM SASE FEL at the Tesla Test Facility

    SciTech Connect

    Pierini, P.; Fawley, W.M.

    1995-12-31

    We present here an analysis of the shot noise startup of the 6 nm SASE FEI proposal at the TESLA Test Facility in DESY The statistical of the saturation length and output power due to the intrinsic randomness of the noise startup are investigated with the use of the 2D time dependent code GINGER, that takes into account propagation effects and models shot noise. We then provide estimates for the spectral contents and linewidth of the emitted radiation and describe its spiking characteristics. The output radiation will develop superradiant spikes seeded by the shot noise in the electron beam, which can entrance the average emitted power at the expense of some spectral broadening.

  10. Design of a Low Loss SRF Cavity for the ILC

    SciTech Connect

    Sekutowicz, J.; Ge, L.; Ko, K.; Lee, L.; Li, Z.; Ng, C.K.; Schussman, G.; Xiao, L.; Gonin, I.; Khabiboulline, T.; Solyak, N.; Kneisel, P.; Morozumi, Y.; Saito, K.; /KEK, Tsukuba

    2006-03-03

    An international team comprising SLAC, KEK, FNAL, JLAB and DESY is collaborating on the design, fabrication and test of a low loss, 1.3 GHz 9-cell SRF structure as a potential improvement for the ILC main linac. The advantages of this structure over the TESLA structure include lower cryogenic loss, shorter rise time, and less stored energy. Among the issues to be addressed in this design are HOM damping, Lorentz force detuning and multipacting. We will report on HOM damping calculations using the parallel finite element eigenmode solver Omega3P and the progress made towards an optimized design. Studies on multipacting and estimates of the Lorentz force detuning will also be presented.

  11. TESLA & ILC Cryomodules

    SciTech Connect

    Peterson, T. J.; Weisend, II, J. G.

    2016-01-01

    The TESLA collaboration developed a unique variant of SRF cryomodule designs, the chief feature being use of the large, low pressure helium vapor return pipe as the structural support backbone of the cryomodule. Additional innovative features include all cryogenic piping within the cryomodule (no parallel external cryogenic transfer line), long strings of RF cavities within a single cryomodule, and cryomodules connected in series. Several projects, including FLASH and XFEL at DESY, LCLS-II at SLAC, and the ILC technical design have adopted this general design concept. Advantages include saving space by eliminating the external transfer line, relatively tight packing of RF cavities along the beamline due to fewer warm-cold transitions, and potentially lower costs. However, a primary disadvantage is the relative lack of independence for warm-up, replacement, and cool-down of individual cryomodules.

  12. Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement.

    PubMed

    Varshney, Rajeev K; Song, Chi; Saxena, Rachit K; Azam, Sarwar; Yu, Sheng; Sharpe, Andrew G; Cannon, Steven; Baek, Jongmin; Rosen, Benjamin D; Tar'an, Bunyamin; Millan, Teresa; Zhang, Xudong; Ramsay, Larissa D; Iwata, Aiko; Wang, Ying; Nelson, William; Farmer, Andrew D; Gaur, Pooran M; Soderlund, Carol; Penmetsa, R Varma; Xu, Chunyan; Bharti, Arvind K; He, Weiming; Winter, Peter; Zhao, Shancen; Hane, James K; Carrasquilla-Garcia, Noelia; Condie, Janet A; Upadhyaya, Hari D; Luo, Ming-Cheng; Thudi, Mahendar; Gowda, C L L; Singh, Narendra P; Lichtenzveig, Judith; Gali, Krishna K; Rubio, Josefa; Nadarajan, N; Dolezel, Jaroslav; Bansal, Kailash C; Xu, Xun; Edwards, David; Zhang, Gengyun; Kahl, Guenter; Gil, Juan; Singh, Karam B; Datta, Swapan K; Jackson, Scott A; Wang, Jun; Cook, Douglas R

    2013-03-01

    Chickpea (Cicer arietinum) is the second most widely grown legume crop after soybean, accounting for a substantial proportion of human dietary nitrogen intake and playing a crucial role in food security in developing countries. We report the ∼738-Mb draft whole genome shotgun sequence of CDC Frontier, a kabuli chickpea variety, which contains an estimated 28,269 genes. Resequencing and analysis of 90 cultivated and wild genotypes from ten countries identifies targets of both breeding-associated genetic sweeps and breeding-associated balancing selection. Candidate genes for disease resistance and agronomic traits are highlighted, including traits that distinguish the two main market classes of cultivated chickpea--desi and kabuli. These data comprise a resource for chickpea improvement through molecular breeding and provide insights into both genome diversity and domestication.

  13. Radiation Damage Studies for Silicon Sensors for the XFEL

    NASA Astrophysics Data System (ADS)

    Perrey, H.

    2012-12-01

    For the study of radiation damage of silicon sensors by 12 keV X-rays for doses up to 1 GGy an irradiation facility has been set up at HASYLAB at DESY. Test structures (gate-controlled diodes) have been irradiated and the properties of the Si-SiO2 interface under high irradiation have been studied using I/V, C/V, and TDRC measurements. In addition to a strong increase of the interface current and a large shift of the flat-band voltage, strong hysteresis effects have been found. The data can be qualitatively described by a model which includes interface traps, fixed and mobile oxide charges. It is found that above doses of several MGy the density of interface traps decreases, whereas the density of fixed and mobile oxide charges appears to saturate. The origin of these effects is not understood so far.

  14. Radiation Damage Studies for Silicon Sensors for the XFEL

    NASA Astrophysics Data System (ADS)

    Perrey, H.

    For the study of radiation damage of silicon sensors by 12 keV X-rays for doses up to 1 GGy an irradiation facility has been set up at HASYLAB at DESY. Test structures (gate-controlled diodes) have been irradiated and the properties of the Si-SiO2 interface under high irradiation have been studied using I/V, C/V, and TDRC measurements. In addition to a strong increase of the interface current and a large shift of the flat-band voltage, strong hysteresis effects have been found. The data can be qualitatively described by a model which includes interface traps, fixed and mobile oxide charges. It is found that above doses of several MGy the density of interface traps decreases, whereas the density of fixed and mobile oxide charges appears to saturate. The origin of these effects is not understood so far.

  15. Spectroscopy of the UPSILON(2S) with the Crystal Ball

    SciTech Connect

    Irion, J.

    1985-04-01

    The Crystal Ball experiment has been taking data at the DORIS II storage ring at DESY/Hamburg on the UPSILON(2S) and UPSILON(1S) resonances since summer 1982. Results on the hadronic transitions between the UPSILON(2S) and the UPSILON(1S) are presented as well as measurements of the radiative decays of the UPSILON(2S) to the chi/sub b/ states in inclusive and exclusive channels. The exclusive UPSILON(2S) ..-->.. ..gamma..chi/sub b/ ..-->.. ..gamma gamma..UPSILON(1S) ..-->.. ..gamma gamma..l/sup +/l/sup -/ sample allows a study of the spins of the chi/sub b/ states. Also discussed is the present status of the zeta(8.3) in the radiative decays of the UPSILON(1S). 22 refs., 14 figs.

  16. Electronics and Algorithms for HOM Based Beam Diagnostics

    SciTech Connect

    Frisch, Josef; McCormick, Douglas; May, Justin; Molloy, Stephen; Ross, Marc; Smith, Tonee; Baboi, Nicoleta; Hensler, Olaf; Paparella, Rita; Petrosyan, Lyudvig; Eddy, Nathan; Nagaitsev, Sergei; Napoly, Olivier; Simon, Claire

    2006-11-20

    The signals from the Higher Order Mode (HOM) ports on superconducting cavities can be used as beam position monitors and to do survey structure alignment. A HOM-based diagnostic system has been installed to instrument both couplers on each of the 40 cryogenic accelerating structures in the DESY TTF2 Linac. The electronics uses a single stage down conversion from the 1.7 GHz HOM spectral line to a 20MHz IF which has been digitized. The electronics is based on low cost surface mount components suitable for large scale production. The analysis of the HOM data is based on Singular Value Decomposition. The response of the OM modes is calibrated using conventional BPMs.

  17. Cavity Alighment Using Beam Induced Higher Order Modes Signals in the TTF Linac

    SciTech Connect

    Ross, M.; Frisch, J.; Hacker, K.E.; Jones, R.M.; McCormick, D.; O'Connell, C.; Smith, T.; Napoly, O.; Paparella, R.; Baboi, N.; Wendt, M.; /DESY

    2005-07-06

    Each nine cell superconducting (SC) accelerator cavity in the TESLA Test Facility (TTF) at DESY [1] has two higher order mode (HOM) couplers that efficiently remove the HOM power [2]. They can also provide useful diagnostic signals. The most interesting modes are in the first 2 cavity dipole passbands. They are easy to identify and their amplitude depends linearly on the beam offset from the cavity axis making them excellent beam position monitors (BPM). By steering the beam through an eight-cavity cryomodule, we can use the HOM signals to estimate internal residual alignment errors and minimize wakefield related beam emittance growth. We built and tested a time-domain based waveform recorder system that captures information from each mode in these two bands on each beam pulse. In this paper we present a preliminary experimental study of the single-bunch generated HOM signals at the TTF linac including estimates of cavity alignment precision and HOM BPM resolution.

  18. High Precision SC Cavity Diagnostics with HOM Measurements

    SciTech Connect

    Frisch, Josef; Hendrickson, Linda; McCormick, Douglas; May, Justin; Molloy, Stephen; Ross, Marc; /SLAC

    2006-08-18

    Experiments at the FLASH linac at DESY have demonstrated that the Higher Order Modes induced in Superconducting Cavities can be used to provide a variety of beam and cavity diagnostics. The centers of the cavities can be determined from the beam orbit which produces minimum power in the dipole HOM modes. The phase and amplitude of the dipole modes can be used as a high resolution beam position monitor, and the phase of the monopole modes to measure the beam phase relative to the accelerator RF. Beam orbit feedback which minimizes the dipole HOM power in a set of structures has been demonstrated. For most SC accelerators, the existing HOM couplers provide the necessary signals, and the down mix and digitizing electronics are straightforward, similar to those for a conventional BPM.

  19. ELECTROMAGNETIC FIELD MEASUREMENT OF FUNDAMENTAL AND HIGHER-ORDER MODES FOR 7-CELL CAVITY OF PETRA-II

    SciTech Connect

    Kawashima, Y.; Blednykh, A.; Cupolo, J.; Davidsaver, M.; Holub, B.; Ma, H.; Oliva, J.; Rose, J.; Sikora, R.; Yeddulla, M.

    2011-03-28

    The booster synchrotron for NSLS-II will include a 7-cell PETRA cavity, which was manufactured for the PETRA-II project at DESY. The cavity fundamental frequency operates at 500 MHz. In order to verify the impedances of the fundamental and higher-order modes (HOM), which were calculated by computer code, we measured the magnitude of the electromagnetic field of the fundamental acceleration mode and HOM using the bead-pull method. To keep the cavity body temperature constant, we used a chiller system to supply cooling water at 20 degrees C. The bead-pull measurement was automated with a computer. We encountered some issues during the measurement process due to the difficulty in measuring the electromagnetic field magnitude in a multi-cell cavity. We describe the method and apparatus for the field measurement, and the obtained results.

  20. Electronics and Algorithms for HOM Based Beam Diagnostics

    SciTech Connect

    Frisch, Josef; Baboi, Nicoleta; Eddy, Nathan; Nagaitsev, Sergei; Hensler, Olaf; McCormick, Douglas; May, Justin; Molloy, Stephen; Napoly, Olivier; Paparella, Rita; Petrosyan, Lyudvig; Ross, Marc; Simon, Claire; Smith, Tonee; /SLAC /DESY /Fermilab /DSM, DAPNIA, Saclay

    2006-10-16

    The signals from the Higher Order Mode (HOM) ports on superconducting cavities can be used as beam position monitors and to do survey structure alignment. A HOM-based diagnostic system has been installed to instrument both couplers on each of the 40 cryogenic accelerating structures in the DESY TTF2 Linac. The electronics uses a single stage down conversion form the 1.7 GHz HOM spectral line to a 20MHz IF which has been digitized. The electronics is based on low cost surface mount components suitable for large scale production. The analysis of the HOM data is based on Singular Value Decomposition. The response of the OM modes is calibrated using conventional BPMs.

  1. CONSTRAINTS ON IONIZING PHOTON PRODUCTION FROM THE LARGE-SCALE Lyα FOREST

    SciTech Connect

    Pontzen, Andrew; Peiris, Hiranya; Bird, Simeon; Verde, Licia

    2014-09-10

    Recent work has shown that the z ≅ 2.5 Lyα forest on large scales encodes information about the galaxy and quasar populations that keep the intergalactic medium photoionized. We present the first forecasts for constraining the populations with data from current and next-generation surveys. At a minimum, the forest should tell us whether galaxies or, conversely, quasars dominate the photon production. The number density and clustering strength of the ionizing sources might be estimated to sub-10% precision with a DESI-like survey if degeneracies (e.g., with the photon mean-free-path, small-scale clustering power normalization, and potentially other astrophysical effects) can be broken by prior information. We demonstrate that when inhomogeneous ionization is correctly handled, constraints on dark energy do not degrade.

  2. Parameter study of the VUV-FEL at the Tesla Test Facility

    SciTech Connect

    Brefeld, W.; Faatz, B.

    1995-12-31

    In this contribution we present a detailed study of the influence of the electron beam and machine parameters on the performance of the TTF VUV FEL, which is in its design stage at DESY. The TTF FEL will be a 6 nm SASE device operating with the beam provided by the Tesla Test Facility superconducting linac, driven by an rf photcathode gun. The FEL output power and saturation length have been assessed with the use of different 2D3-D steady state simulation codes. The parameter range over which the FEL would reach saturation within the specified undulator length of 25 to 30 m have been determined and checked against semi-analytical expressions.

  3. The Role of INSPIRE in HEP Data Preservation Efforts

    SciTech Connect

    Brooks, Travis C.; /SLAC

    2010-06-11

    INSPIRE is a new community resource for HEP literature and associated information. It is based on the combination of SPIRES content and features and the powerful Invenio software developed at CERN. The INSPIRE service will come online in fall of 2009, and be run by CERN, DESY, Fermilab and SLAC. Data preservation, to be successful, must not only preserve the data, but must also organize it and allow it to be found by those who would make use of it, and resources such as INSPIRE are ideally positioned and ready to provide this organization and context. In addition, INSPIRE will soon be ready to provide storage of smaller datasets, such as high-level analysis objects, as stand-alone objects placed in the repository or as objects associated with an analysis paper. This small project could pave the way towards the context and organization which is one piece of the infrastructure needed for all levels of data preservation.

  4. Azimuthal asymmetry as a new handle on {sigma}{sub L}/{sigma}{sub T} in diffractive DIS

    SciTech Connect

    Nikolaev, N.N. |; Pronyaev, A.V.; Zakharov, B.G.

    1999-05-01

    We propose a new method of determining R{sup D}={sigma}{sub L}{sup D}/{sigma}{sub T}{sup D} from the dependence of the diffractive cross section on the azimuthal angle between the electron scattering and proton scattering planes. The method is based on our finding of the model independence of the ratio of the LT interference and transverse diffractive structure functions. The predicted azimuthal asymmetry is substantial and can be measured at DESY HERA. We show that the accuracy of our reconstruction of R{sup D} is adequate for a reliable test of an important PQCD prediction of R{sup D}{approx_gt}1 for large {beta}. {copyright} {ital 1999} {ital The American Physical Society}

  5. Control system modeling for superconducting accelerator

    NASA Astrophysics Data System (ADS)

    Czarski, Tomasz; Pozniak, Krzysztof; Romaniuk, Ryszard; Simrock, Stefan

    2006-10-01

    A digital control of superconducting cavities for a linear accelerator is presented. The LLRF - Low Level Radio Frequency system for FLASH project in DESY is introduced. FPGA based controller supported by MATLAB system was developed to investigate the novel firmware implementation. Algebraic model in complex domain is proposed for the system analyzing. Calibration procedure of a signal path is considered for a multi-channel control. Identification of the system parameters is carried out by the least squares method application. Control tables: Feed-Forward and Set-Point are determined for the required cavity performance, according to the recognized process. Feedback loop is tuned by fitting a complex gain of a corrector unit. Adaptive control algorithm is applied for feed-forward and feedback modes. Experimental results are presented for a cavity representative operation.

  6. Non-linear QCD dynamics and exclusive production in ep collisions

    NASA Astrophysics Data System (ADS)

    Gonçalves, V. P.; Machado, M. V. T.; Meneses, A. R.

    2010-07-01

    The exclusive processes in electron-proton ( ep) interactions are an important tool to investigate the QCD dynamics at high energies as they are in general driven by the gluon content of proton which is strongly subject to parton saturation effects. In this paper we compute the cross sections for the exclusive vector meson production as well as the deeply virtual Compton scattering (DVCS) relying on the color dipole approach and considering the numerical solution of the Balitsky-Kovchegov equation including running coupling corrections. We show that the small- x evolution given by this evolution equation is able to describe the DESY-HERA data and is relevant for the physics of the exclusive observables in future electron-proton colliders and in photoproduction processes to be measured in coherent interactions at the LHC.

  7. Proceedings of the DoD Workload Assessment Workshop on Workload Assessment Techniques and Tools Held in Dayton Ohio on 27-28 September 1986.

    DTIC Science & Technology

    1987-09-15

    AIU2 2.5/ 5.0/ 0.0/ 0 AGUN -POSTION GUN A3M/SAF S ITC ON A AS DESIED ADUD 2.5/ 5.0/ 0.0/ 2 0 AGU1AGU2 AHUl-ROTATE HUD SBC 01O9 TO SYMBOLOGY DECEASE...3.3/ 0 AGU2 2.5/ 5.1 3. 3/ 0 AGUN 2.5/ 5.0/ 3.3/ 2 0 AGUIAGU2 AHU1 2.51 5.0/ 3.41 0 -’ A1U2 2.51 5.0f 3.4/ 0 AHUD 2.51 5.0/ 3.4/ 2 0 AHUIAHU2 ALM1 2.5

  8. DSPS in data acquisition

    SciTech Connect

    Kirsch, M.; Haeupke, T.; Oelschlaeger, R.; Struck, B.

    1997-12-31

    Off-the-shelf and customized DSP boards in different bus architectures are perfectly suited to act as building blocks for flexible and high performance data acquisition systems. Due to their architecture they can be used to enhance the performance of existing equipment as add ons, as state-of-the-art readout controllers, event builders, on-the-fly data formatters and higher level trigger processors. Applications covering the above mentioned fields with Motorolas 96002 HARC DSP in the DESY HERMES and H1 experiments, at the focal plane polarimeter at KVI and the NIST high flux neutron backscattering spectrometer will be presented. Future possibilities with VME, PCI and PMC boards based on Analog Devices SHARC DSP will be discussed. Systems on the base of Texas Instruments TMS320C6X promise to provide unprecedented performance.

  9. Current Experiments in Particle Physics (September 1996)

    SciTech Connect

    Galic, H.; Lehar, F.; Klyukhin, V.I.; Ryabov, Yu.G.; Bilak, S.V.; Illarionova, N.S.; Khachaturov, B.A.; Strokovsky, E.A.; Hoffman, C.M.; Kettle, P.-R.; Olin, A.; Armstrong, F.E.

    1996-09-01

    This report contains summaries of current and recent experiments in Particle Physics. Included are experiments at BEPC (Beijing), BNL, CEBAF, CERN, CESR, DESY, FNAL, Frascati, ITEP (Moscow), JINR (Dubna), KEK, LAMPF, Novosibirsk, PNPI (St. Petersburg), PSI, Saclay, Serpukhov, SLAC, and TRIUMF, and also several proton decay and solar neutrino experiments. Excluded are experiments that finished taking data before 1991. Instructions are given for the World Wide Web (WWW) searching of the computer database (maintained under the SLAC-SPIRES system) that contains the summaries. This report contains full summaries of 180 approved current and recent experiments in elementary particle physics. The focus of the report is on selected experiments which directly contribute to our better understanding of elementary particles and their properties such as masses, widths or lifetimes, and branching fractions.

  10. Cosmic Evolution Through UV Spectroscopy (CETUS): A NASA Probe-Class Mission Concept

    NASA Astrophysics Data System (ADS)

    Heap, Sara R.; CETUS Team

    2017-01-01

    CETUS is a probe-class mission concept proposed for study to NASA in November 2016. Its overarching objective is to provide access to the ultraviolet (~100-400 nm) after Hubble has died. CETUS will be a major player in the emerging global network of powerful, new telescopes such as E-ROSITA, DESI, Subaru/PFS, GMT, LSST, WFIRST, JWST, and SKA. The CETUS mission concept provisionally features a 1.5-m telescope with a suite of instruments including a near-UV multi-object spectrograph (200-400 nm) complementing Subaru/PFS observations, wide-field far-UV and near-UV cameras, and far-UV and near-UV spectrographs that can be operated in either high-resolution or low-resolution mode. We have derived the scope and specific science requirements for CETUS for understanding the evolutionary history of galaxies, stars, and dust, but other applications are possible.

  11. Towards an amplitude analysis of exclusive. gamma gamma. processes

    SciTech Connect

    Pennington, M.R.

    1988-06-01

    The potential of two photon processes to shed light on the parton content of resonances, we maintain, can only be realized in practice by moving towards an Amplitude Analysis of experimental data. By using the process ..gamma gamma.. ..-->.. ..pi pi.. as an example, the way to do this is discussed. Presently claimed uncertainties in the ..gamma gamma.. width of even the well-known f/sub 2/ (1270) are shown to be over-optimistic and the fitted couplings of the overlapping scalar states in the 1 GeV region meaningless. Only the use of Amplitude Analysis techniques on the new higher statistics data from SLAC and DESY can resolve these uncertainties and lead to definite and significant results. 37 refs., 18 figs.

  12. A new sample environment for cryogenic nuclear resonance scattering experiments on single crystals and microsamples at P01, PETRA III

    NASA Astrophysics Data System (ADS)

    Rackwitz, Sergej; Faus, Isabelle; Schmitz, Markus; Kelm, Harald; Krüger, Hans-Jörg; Andersson, K. Kristoffer; Hersleth, Hans-Petter; Achterhold, Klaus; Schlage, Kai; Wille, Hans-Christian; Schünemann, Volker; Wolny, Juliusz A.

    2014-04-01

    In order to carry out orientation dependent nuclear resonance scattering (NRS) experiments on small single crystals of e.g. iron proteins and/or chemical complexes but also on surfaces and other micrometer-sized samples a 2-circle goniometer including sample positioning optics has been installed at beamline P01, PETRA III, DESY, Hamburg. This sample environment is now available for all users of this beamline. Sample cooling is performed with a cryogenic gas stream which allows NRS measurements in the temperature range from 80 up to 400 K. In a first test this new sample environment has been used in order to investigate the orientation dependence of the nuclear inelastic scattering (NIS) signature of (i) a dinuclear iron(II) spin crossover (SCO) system and (ii) a hydrogen peroxide treated metmyoglobin single crystal.

  13. Quantum Efficiency Characterization and Optimization of a Tungsten Transition-Edge Sensor for ALPS II

    NASA Astrophysics Data System (ADS)

    Bastidon, Noëmie; Horns, Dieter; Lindner, Axel

    2016-07-01

    The ALPS II experiment, Any Light Particle Search II at DESY in Hamburg, will look for sub-eV mass new fundamental bosons (e.g., axion-like particles, hidden photons, and other weakly interacting sub-eV particles) in the next years by means of a light-shining-through-wall setup. The ALPS II photosensor is a tungsten transition-edge sensor (W-TES) optimized for 1064 nm photons. This TES, operated at 80 mK, has already allowed single infrared photon detections as well as non-dispersive spectroscopy with very low background rates. The demonstrated quantum efficiency for such TES is up to 95 % (1064 nm) as has been already demonstrated by the US National Institute of Standards and Technology. A back-to-back measurement of the ALPS TES quantum efficiency using a calibrated charge-coupled device camera has lead to a first estimation of 30 %. Improvement methods are discussed.

  14. Development of the third harmonic SC cavity at Fermilab

    SciTech Connect

    Nikolay Solyak et al.

    2004-08-05

    The third harmonic 3.9 GHz superconducting cavity was recently proposed by DESY for a new generation of high brightness photo-injector (TTF photoinjector-2) to compensate nonlinear distortion of the longitudinal phase space due to RF curvature of the 1.3 GHz TESLA cavities [1,2]. Installation of the 3rd harmonic cavity will allow us to generate ultra-short (<50 {micro}m rms) highly charged electron bunches with an extremely small transverse normalized emittance (<1 {micro}m). This is required to support a new generation of linear colliders, free electron lasers and synchrotron radiation sources. In this paper we present the current status of the 3rd harmonic cavity being developed at Fermilab. We discuss the design procedure, the building and testing of the copper and niobium half-cells and components, the design of input and HOM couplers.

  15. Test of Two NB Superstructure Prototypes

    SciTech Connect

    Sekutowicz, J.

    2004-04-16

    An alternative layout of the TESLA linear collider [1], based on weakly coupled multi-cell superconducting structures (superstructures), significantly reduces investment cost due to a simplification in the RF system of the main accelerator. In January 1999, preparation of the beam test of the superstructure began in order to prove the feasibility of this layout. Progress in the preparation was reported frequently in Proceedings of TESLA Collaboration Meetings. Last year, two superstructures were installed in the TESLA Test Facility (TTF) linac at DESY to experimentally verify: methods to balance the accelerating gradient in a weakly coupled system, the stability of the energy gain for the entire train of bunches in macro-pulses and the damping of Higher Order Modes (HOMs). We present results of the first cold and beam test of these two Nb prototypes.

  16. Micromachine Wedge Stepping Motor

    SciTech Connect

    Allen, J.J.; Schriner, H.K.

    1998-11-04

    A wedge stepping motor, which will index a mechanism, has been designed and fabricated in the surface rnicromachine SUMMiT process. This device has demonstrated the ability to index one gear tooth at a time with speeds up to 205 teeth/see. The wedge stepper motor has the following features, whi:h will be useful in a number of applications. o The ability to precisely position mechanical components. . Simple pulse signals can be used for operation. o Only 2 drive signals are requixed for operation. o Torque and precision capabilities increase with device size . The device to be indexed is restrained at all times by the wedge shaped tooth that is used for actuation. This paper will discuss the theory of operation and desi=m of the wedge stepping motor. The fabrication and testing of I he device will also be presented.

  17. U.C. Davis particle physics research. Final technical progress report, March 1, 1989--August 31, 1992

    SciTech Connect

    1992-12-31

    During the period of this contract, the participants carried out theoretical and experimental researches in high energy particle physics. The experimental group has been working at Fermilab studying the collisions of high energy hadrons on fixed targets; at the KEK laboratory in Japan participating in the AMY collaboration at the high energy electron-positron collider, Tristan; at the DESY laboratory in Germany participating in the H1 collaboration at the newly commissioned electron-proton collider, Hera; and in collaboration with LBL on pixel detector design for the SSC, while waiting for high luminosity running to start at PEP. The theoretical group has been engaged in phenomenological studies of high energy interactions, particularly those associated with the higgs field and various aspects of symmetry breaking, heavy flavor decays and CP noninvariance, super symmetry, Yang-Mills theory and electroweak symmetry breaking. Lattice gauge calculations on finite temperature phase transitions have also been under study, as well as work on string theory.

  18. Novel module production methods for the CMS pixel detector, upgrade phase I

    NASA Astrophysics Data System (ADS)

    Blank, T.; Caselle, M.; Weber, M.; Kudella, S.; Colombo, F.; Hansen, K.; Arab, S.

    2015-02-01

    For the High-Luminosity upgrade of the LHC (HL-LHC), phase I, the CMS pixel detector needs to be replaced. In order to improve the tracking resolution even at high luminosity the pixel detector is upgraded by a fourth barrel layer. This paper describes the production process and results for the fourth barrel layer for the CMS silicon pixel detector, upgrade phase I. The additional barrel layer will be produced by KIT and DESY. Both research centers have commonly developed and investigated new production processes, including SAC solder bump jetting, gold stud bumping and "Precoat by Powder Processes" (PPS) to bump the sensor tiles and prepare them for the flip-chip process. First bare modules have been produced with the new digital ROC.

  19. ep Collider experiments and physics

    SciTech Connect

    Atwood, D.; Baur, U.; Bluemlein, J.

    1992-12-31

    The physics prospects for detectors at ep colliders are examined. Colliders considered include the HERA facility at DESY, LEP I {times} LHC, and LEP II {times} LHC at CERN. Physics topics studied include machine energy and polarization, as well as detector resolution, calibration, jet identification and backgrounds from beam-gas interactions. QCD topics include measurements of the quark and gluon structure functions and parton distributions, as well as the expansion of the observable cross section into angular functions. Electroweak topics include measurements of the weak mixing angle, radiative corrections, and WW{gamma} (WWZ) couplings. Topics beyond the standard model include observation of new Z`s, indirect production of Leptoquarks, pair production of sfermions and searches for R-parity-violating SUSY particle production.

  20. Operational Experience with the Nb/Pb SRF Photoelectron Gun

    SciTech Connect

    Kamps, T; Barday, R; Jankowiak, A; Knoblock, J; Kugeler, O; Matveenko, A N; Neumann, A; Quast, T; Rudolph, J; Schubert, S G; Volker, J; Kneisel, P; Nietubyc, R; Sekutowicz, J K; Smedley, J; Teichert, J; Volkov, V; Will, I

    2012-07-01

    SRF photoelectron guns offer the promise of high brightness, high average current beam production for the next generation of accelerator driven light sources such as free electron lasers, THz radiation sources or energy-recovery linac driven synchrotron radiation sources. In a first step a fully superconducting RF (SRF) photoelectron gun is under development by a collaboration between HZB, DESY, JLAB, BNL and NCBJ. The aim of the experiment is to understand and improve the performance of a Nb SRF gun cavity coated with a small metallic Pb cathode film on the cavity backplane. This paper describes the highlights from the commissioning and beam parameter measurements. The main focus is on lessons learned from operation of the SRF gun.

  1. Status of the crystallography beamlines at PETRA III

    NASA Astrophysics Data System (ADS)

    Burkhardt, Anja; Pakendorf, Tim; Reime, Bernd; Meyer, Jan; Fischer, Pontus; Stübe, Nicolas; Panneerselvam, Saravanan; Lorbeer, Olga; Stachnik, Karolina; Warmer, Martin; Rödig, Philip; Göries, Dennis; Meents, Alke

    2016-03-01

    Since 2013, three beamlines for macromolecular crystallography are available to users at the third-generation synchrotron PETRA III in Hamburg: P11, P13 and P14, the latter two operated by EMBL. Beamline P11 is operated by DESY and is equipped with a Pilatus 6M detector. Together with the photon flux of 2× 10^{13} ph/s provided by the very brilliant X-ray source of PETRA III, a full data set can be typically collected in less than 2min. P11 provides state-of-the-art microfocusing capabilities with beam sizes down to 1× 1 μ m2, which makes the beamline ideally suited for investigation of microcrystals and serial crystallography experiments. An automatic sample changer allows fast sample exchange in less than 20s, which enables high-throughput crystallography and fast crystal screening. For sample preparation, an S2 biosafety laboratory is available in close proximity to the beamline.

  2. The HERMES dual-radiator ring imaging Cherenkov detector

    NASA Astrophysics Data System (ADS)

    Akopov, N.; Aschenauer, E. C.; Bailey, K.; Bernreuther, S.; Bianchi, N.; Capitani, G. P.; Carter, P.; Cisbani, E.; De Leo, R.; De Sanctis, E.; De Schepper, D.; Djordjadze, V.; Filippone, B. W.; Frullani, S.; Garibaldi, F.; Hansen, J.-O.; Hommez, B.; Iodice, M.; Jackson, H. E.; Jung, P.; Kaiser, R.; Kanesaka, J.; Kowalczyk, R.; Lagamba, L.; Maas, A.; Muccifora, V.; Nappi, E.; Negodaeva, K.; Nowak, W.-D.; O'Connor, T.; O'Neill, T. G.; Potterveld, D. H.; Ryckbosch, D.; Sakemi, Y.; Sato, F.; Schwind, A.; Shibata, T.-A.; Suetsugu, K.; Thomas, E.; Tytgat, M.; Urciuoli, G. M.; Van de Kerckhove, K.; Van de Vyver, R.; Yoneyama, S.; Zohrabian, H.; Zhang, L. F.

    2002-03-01

    The construction and use of a dual radiator Ring Imaging Cherenkov (RICH) detector is described. This instrument was developed for the HERMES experiment at DESY which emphasises measurements of semi-inclusive deep-inelastic scattering. It provides particle identification for pions, kaons, and protons in the momentum range from 2 to 15 GeV, which is essential to these studies. The instrument uses two radiators, C 4F 10, a heavy fluorocarbon gas, and a wall of silica aerogel tiles. The use of aerogel in a RICH detector has only recently become possible with the development of clear, large, homogeneous and hydrophobic aerogel. A lightweight mirror was constructed using a newly perfected technique to make resin-coated carbon-fiber surfaces of optical quality. The photon detector consists of 1934 photomultiplier tubes (PMT) for each detector half, held in a soft steel matrix to provide shielding against the residual field of the main spectrometer magnet.

  3. Experimental studies of pion-nucleus and nucleon-nucleus interactions at intermediate energies. Progress report, April 1, 1991--March 31, 1994

    SciTech Connect

    1993-09-30

    This report summarizes the work on experimental research in intermediate energy nuclear physics carried out at New Mexico State University in 1991-94 under a grant from the U.S. Department of Energy. Most of these studies involved investigations of various pion-nucleus interactions and nucleon-nucleus charge-exchange reactions. The work was carried out with the LAMPF accelerator at the Los Alamos National Laboratory and the cyclotrons at the Paul Scherrer Institute (PSI) near Zurich, Switzerland, at Indiana University (IUCF), and at TRIUMF in Vancouver, Canada, as collaborative efforts among several laboratories and universities. We have also worked on plans and preparations for new experiments involving studies of the quark structure of nucleons and nuclei, which would be carried out at Fermilab (FNAL), near Chicago, and at the HERA facility at the DESY laboratory in Hamburg, Germany. The NMSU personnel included two faculty members, five postdoctoral research associates, nine graduate students, and one undergraduate student.

  4. Transverse-Target-Spin Asymmetry in Exclusive {omega}-Meson Electroproduction

    SciTech Connect

    Airapetian, A.; Akopov, N.; Akopov, Z.; Aschenauer, E. C.; Augustyniak, W.; Avetissian, A.; Belostotski, S.; Blok, H. P.; Borissov, A.; Bryzgalov, V.; Jackson, H. E.; Reimer, P. E.

    2015-12-17

    Hard exclusive electroproduction of omega mesons is studied with the HERMES spectrometer at the DESY laboratory by scattering 27.6 GeV positron and electron beams off a transversely polarized hydrogen target. The amplitudes of five azimuthal modulations of the single-spin asymmetry of the cross section with respect to the transverse proton polarization are measured. They are determined in the entire kinematic region as well as for two bins in photon virtuality and momentum transfer to the nucleon. Also, a separation of asymmetry amplitudes into longitudinal and transverse components is done. These results are compared to a phenomenological model that includes the pion pole contribution. Within this model, the data favor a positive pi omega transition form factor.

  5. Grating-based tomography of human tissues

    NASA Astrophysics Data System (ADS)

    Müller, Bert; Schulz, Georg; Mehlin, Andrea; Herzen, Julia; Lang, Sabrina; Holme, Margaret; Zanette, Irene; Hieber, Simone; Deyhle, Hans; Beckmann, Felix; Pfeiffer, Franz; Weitkamp, Timm

    2012-07-01

    The development of therapies to improve our health requires a detailed knowledge on the anatomy of soft tissues from the human body down to the cellular level. Grating-based phase contrast micro computed tomography using synchrotron radiation provides a sensitivity, which allows visualizing micrometer size anatomical features in soft tissue without applying any contrast agent. We show phase contrast tomography data of human brain, tumor vessels and constricted arteries from the beamline ID 19 (ESRF) and urethral tissue from the beamline W2 (HASYLAB/DESY) with micrometer resolution. Here, we demonstrate that anatomical features can be identified within brain tissue as well known from histology. Using human urethral tissue, the application of two photon energies is compared. Tumor vessels thicker than 20 μm can be perfectly segmented. The morphology of coronary arteries can be better extracted in formalin than after paraffin embedding.

  6. Screening of the Binding of Small Molecules to Proteins by Desorption Electrospray Ionization Mass Spectrometry Combined with Protein Microarray

    NASA Astrophysics Data System (ADS)

    Yao, Chenxi; Wang, Tao; Zhang, Buqing; He, Dacheng; Na, Na; Ouyang, Jin

    2015-11-01

    The interaction between bioactive small molecule ligands and proteins is one of the important research areas in proteomics. Herein, a simple and rapid method is established to screen small ligands that bind to proteins. We designed an agarose slide to immobilize different proteins. The protein microarrays were allowed to interact with different small ligands, and after washing, the microarrays were screened by desorption electrospray ionization mass spectrometry (DESI MS). This method can be applied to screen specific protein binding ligands and was shown for seven proteins and 34 known ligands for these proteins. In addition, a high-throughput screening was achieved, with the analysis requiring approximately 4 s for one sample spot. We then applied this method to determine the binding between the important protein matrix metalloproteinase-9 (MMP-9) and 88 small compounds. The molecular docking results confirmed the MS results, demonstrating that this method is suitable for the rapid and accurate screening of ligands binding to proteins.

  7. Simultaneous operation of two soft x-ray free-electron lasers driven by one linear accelerator

    NASA Astrophysics Data System (ADS)

    Faatz, B.; Plönjes, E.; Ackermann, S.; Agababyan, A.; Asgekar, V.; Ayvazyan, V.; Baark, S.; Baboi, N.; Balandin, V.; von Bargen, N.; Bican, Y.; Bilani, O.; Bödewadt, J.; Böhnert, M.; Böspflug, R.; Bonfigt, S.; Bolz, H.; Borges, F.; Borkenhagen, O.; Brachmanski, M.; Braune, M.; Brinkmann, A.; Brovko, O.; Bruns, T.; Castro, P.; Chen, J.; Czwalinna, M. K.; Damker, H.; Decking, W.; Degenhardt, M.; Delfs, A.; Delfs, T.; Deng, H.; Dressel, M.; Duhme, H.-T.; Düsterer, S.; Eckoldt, H.; Eislage, A.; Felber, M.; Feldhaus, J.; Gessler, P.; Gibau, M.; Golubeva, N.; Golz, T.; Gonschior, J.; Grebentsov, A.; Grecki, M.; Grün, C.; Grunewald, S.; Hacker, K.; Hänisch, L.; Hage, A.; Hans, T.; Hass, E.; Hauberg, A.; Hensler, O.; Hesse, M.; Heuck, K.; Hidvegi, A.; Holz, M.; Honkavaara, K.; Höppner, H.; Ignatenko, A.; Jäger, J.; Jastrow, U.; Kammering, R.; Karstensen, S.; Kaukher, A.; Kay, H.; Keil, B.; Klose, K.; Kocharyan, V.; Köpke, M.; Körfer, M.; Kook, W.; Krause, B.; Krebs, O.; Kreis, S.; Krivan, F.; Kuhlmann, J.; Kuhlmann, M.; Kube, G.; Laarmann, T.; Lechner, C.; Lederer, S.; Leuschner, A.; Liebertz, D.; Liebing, J.; Liedtke, A.; Lilje, L.; Limberg, T.; Lipka, D.; Liu, B.; Lorbeer, B.; Ludwig, K.; Mahn, H.; Marinkovic, G.; Martens, C.; Marutzky, F.; Maslocv, M.; Meissner, D.; Mildner, N.; Miltchev, V.; Molnar, S.; Mross, D.; Müller, F.; Neumann, R.; Neumann, P.; Nölle, D.; Obier, F.; Pelzer, M.; Peters, H.-B.; Petersen, K.; Petrosyan, A.; Petrosyan, G.; Petrosyan, L.; Petrosyan, V.; Petrov, A.; Pfeiffer, S.; Piotrowski, A.; Pisarov, Z.; Plath, T.; Pototzki, P.; Prandolini, M. J.; Prenting, J.; Priebe, G.; Racky, B.; Ramm, T.; Rehlich, K.; Riedel, R.; Roggli, M.; Röhling, M.; Rönsch-Schulenburg, J.; Rossbach, J.; Rybnikov, V.; Schäfer, J.; Schaffran, J.; Schlarb, H.; Schlesselmann, G.; Schlösser, M.; Schmid, P.; Schmidt, C.; Schmidt-Föhre, F.; Schmitz, M.; Schneidmiller, E.; Schöps, A.; Scholz, M.; Schreiber, S.; Schütt, K.; Schütz, U.; Schulte-Schrepping, H.; Schulz, M.; Shabunov, A.; Smirnov, P.; Sombrowski, E.; Sorokin, A.; Sparr, B.; Spengler, J.; Staack, M.; Stadler, M.; Stechmann, C.; Steffen, B.; Stojanovic, N.; Sychev, V.; Syresin, E.; Tanikawa, T.; Tavella, F.; Tesch, N.; Tiedtke, K.; Tischer, M.; Treusch, R.; Tripathi, S.; Vagin, P.; Vetrov, P.; Vilcins, S.; Vogt, M.; de Zubiaurre Wagner, A.; Wamsat, T.; Weddig, H.; Weichert, G.; Weigelt, H.; Wentowski, N.; Wiebers, C.; Wilksen, T.; Willner, A.; Wittenburg, K.; Wohlenberg, T.; Wortmann, J.; Wurth, W.; Yurkov, M.; Zagorodnov, I.; Zemella, J.

    2016-06-01

    Extreme-ultraviolet to x-ray free-electron lasers (FELs) in operation for scientific applications are up to now single-user facilities. While most FELs generate around 100 photon pulses per second, FLASH at DESY can deliver almost two orders of magnitude more pulses in this time span due to its superconducting accelerator technology. This makes the facility a prime candidate to realize the next step in FELs—dividing the electron pulse trains into several FEL lines and delivering photon pulses to several users at the same time. Hence, FLASH has been extended with a second undulator line and self-amplified spontaneous emission (SASE) is demonstrated in both FELs simultaneously. FLASH can now deliver MHz pulse trains to two user experiments in parallel with individually selected photon beam characteristics. First results of the capabilities of this extension are shown with emphasis on independent variation of wavelength, repetition rate, and photon pulse length.

  8. Latest Results on Cavity Gradient and Input RF Stability at FLASH/TTF Facility

    SciTech Connect

    Pei, Shilun; Adolphsen, Chris E.; Carwardine, John; Walker, Nicholas John; /DESY

    2010-08-25

    The FLASH L-band (1.3 GHz) superconducting accelerator facility at DESY has a Low Level RF (LLRF) system that is similar to that envisioned for ILC. This system has extensive monitoring capability and was used to gather performance data relevant to ILC. Recently, waveform data were recorded with both beam on and off for three, 8-cavity cryomodules to evaluate the input RF and cavity gradient stability and study the rf overhead required to achieve constant gradient during the 800 {micro}s pulses. In this paper, we present the recent experimental results and discuss the pulse-to-pulse input rf and cavity gradient stability for both the beam on and off cases. In addition, a model of the gradient variation observed in the beam off case will be described.

  9. Performance of the first prototype of the CALICE scintillator strip electromagnetic calorimeter

    SciTech Connect

    Francis, K.; Repond, J.; Schlereth, J.; Smith, J.; Xia, L.; Baldolemar, E.; Li, J.; Park, S. T.; Sosebee, M.; White, A. P.; Yu, J.; Eigen, G.; Mikami, Y.; Watson, N. K.; Thomson, M. A.; Ward, D. R.; Benchekroun, D.; Hoummada, A.; Khoulaki, Y.; Apostolakis, J.; Dotti, A.; Folger, G.; Ivantchenko, V.; Ribon, A.; Uzhinskiy, V.; Cârloganu, C.; Gay, P.; Manen, S.; Royer, L.; Tytgat, M.; Zaganidis, N.; Blazey, G. C.; Dyshkant, A.; Lima, J. G.R.; Zutshi, V.; Hostachy, J. -Y.; Morin, L.; Cornett, U.; David, D.; Ebrahimi, A.; Falley, G.; Gadow, K.; Göttlicher, P.; Günter, C.; Hartbrich, O.; Hermberg, B.; Karstensen, S.; Krivan, F.; Krüger, K.; Lutz, B.; Morozov, S.; Morgunov, V.; Neubüser, C.; Reinecke, M.; Sefkow, F.; Smirnov, P.; Terwort, M.; Garutti, E.; Laurien, S.; Lu, S.; Marchesini, I.; Matysek, M.; Ramilli, M.; Briggl, K.; Eckert, P.; Harion, T.; Schultz-Coulon, H. -Ch.; Shen, W.; Stamen, R.; Bilki, B.; Norbeck, E.; Northacker, D.; Onel, Y.; Wilson, G. W.; Kawagoe, K.; Sudo, Y.; Yoshioka, T.; Dauncey, P. D.; Wing, M.; Salvatore, F.; Cortina Gil, E.; Mannai, S.; Baulieu, G.; Calabria, P.; Caponetto, L.; Combaret, C.; Della Negra, R.; Grenier, G.; Han, R.; Ianigro, J. -C.; Kieffer, R.; Laktineh, I.; Lumb, N.; Mathez, H.; Mirabito, L.; Petrukhin, A.; Steen, A.; Tromeur, W.; Vander Donckt, M.; Zoccarato, Y.; Calvo Alamillo, E.; Fouz, M. -C.; Puerta-Pelayo, J.; Corriveau, F.; Bobchenko, B.; Chadeeva, M.; Danilov, M.; Epifantsev, A.; Markin, O.; Mizuk, R.; Novikov, E.; Popov, V.; Rusinov, V.; Tarkovsky, E.; Besson, D.; Buzhan, P.; Ilyin, A.; Kantserov, V.; Kaplin, V.; Karakash, A.; Popova, E.; Tikhomirov, V.; Kiesling, C.; Seidel, K.; Simon, F.; Soldner, C.; Weuste, L.; Amjad, M. S.; Bonis, J.; Callier, S.; Conforti di Lorenzo, S.; Cornebise, P.; Doublet, Ph.; Dulucq, F.; Fleury, J.; Frisson, T.; van der Kolk, N.; Li, H.; Martin-Chassard, G.; Richard, F.; de la Taille, Ch.; Pöschl, R.; Raux, L.; Rouëné, J.; Seguin-Moreau, N.; Anduze, M.; Balagura, V.; Boudry, V.; Brient, J. -C.; Cornat, R.; Frotin, M.; Gastaldi, F.; Guliyev, E.; Haddad, Y.; Magniette, F.; Musat, G.; Ruan, M.; Tran, T. H.; Videau, H.; Bulanek, B.; Zacek, J.; Cvach, J.; Gallus, P.; Havranek, M.; Janata, M.; Kvasnicka, J.; Lednicky, D.; Marcisovsky, M.; Polak, I.; Popule, J.; Tomasek, L.; Tomasek, M.; Ruzicka, P.; Sicho, P.; Smolik, J.; Vrba, V.; Zalesak, J.; Belhorma, B.; Ghazlane, H.; Kotera, K.; Ono, H.; Takeshita, T.; Uozumi, S.; Jeans, D.; Chang, S.; Khan, A.; Kim, D. H.; Kong, D. J.; Oh, Y. D.; Götze, M.; Sauer, J.; Weber, S.; Zeitnitz, C.

    2014-11-01

    A first prototype of a scintillator strip-based electromagnetic calorimeter was built, consisting of 26 layers of tungsten absorber plates interleaved with planes of 45 × 10 × 3 mm³ plastic scintillator strips. Data were collected using a positron test beam at DESY with momenta between 1 and 6 GeV/c. The prototype's performance is presented in terms of the linearity and resolution of the energy measurement. These results represent an important milestone in the development of highly granular calorimeters using scintillator strip technology. A number of possible design improvements were identified, which should be implemented in a future detector of this type. This technology is being developed for a future linear collider experiment, aiming at the precise measurement of jet energies using particle flow techniques.

  10. Performance of the first prototype of the CALICE scintillator strip electromagnetic calorimeter

    DOE PAGES

    Francis, K.; Repond, J.; Schlereth, J.; ...

    2014-11-01

    A first prototype of a scintillator strip-based electromagnetic calorimeter was built, consisting of 26 layers of tungsten absorber plates interleaved with planes of 45 × 10 × 3 mm³ plastic scintillator strips. Data were collected using a positron test beam at DESY with momenta between 1 and 6 GeV/c. The prototype's performance is presented in terms of the linearity and resolution of the energy measurement. These results represent an important milestone in the development of highly granular calorimeters using scintillator strip technology. A number of possible design improvements were identified, which should be implemented in a future detector of thismore » type. This technology is being developed for a future linear collider experiment, aiming at the precise measurement of jet energies using particle flow techniques.« less

  11. Method development towards qualitative and semi-quantitative analysis of multiple pesticides from food surfaces and extracts by desorption electrospray ionization mass spectrometry as a preselective tool for food control.

    PubMed

    Gerbig, Stefanie; Stern, Gerold; Brunn, Hubertus E; Düring, Rolf-Alexander; Spengler, Bernhard; Schulz, Sabine

    2017-03-01

    Direct analysis of fruit and vegetable surfaces is an important tool for in situ detection of food contaminants such as pesticides. We tested three different ways to prepare samples for the qualitative desorption electrospray ionization mass spectrometry (DESI-MS) analysis of 32 pesticides found on nine authentic fruits collected from food control. Best recovery rates for topically applied pesticides (88%) were found by analyzing the surface of a glass slide which had been rubbed against the surface of the food. Pesticide concentration in all samples was at or below the maximum residue level allowed. In addition to the high sensitivity of the method for qualitative analysis, quantitative or, at least, semi-quantitative information is needed in food control. We developed a DESI-MS method for the simultaneous determination of linear calibration curves of multiple pesticides of the same chemical class using normalization to one internal standard (ISTD). The method was first optimized for food extracts and subsequently evaluated for the quantification of pesticides in three authentic food extracts. Next, pesticides and the ISTD were applied directly onto food surfaces, and the corresponding calibration curves were obtained. The determination of linear calibration curves was still feasible, as demonstrated for three different food surfaces. This proof-of-principle method was used to simultaneously quantify two pesticides on an authentic sample, showing that the method developed could serve as a fast and simple preselective tool for disclosure of pesticide regulation violations. Graphical Abstract Multiple pesticide residues were detected and quantified in-situ from an authentic set of food items and extracts in a proof of principle study.

  12. Reactions of Microsolvated Organic Compounds at Ambient Surfaces: Droplet Velocity, Charge State, and Solvent Effects

    NASA Astrophysics Data System (ADS)

    Badu-Tawiah, Abraham K.; Campbell, Dahlia I.; Cooks, R. Graham

    2012-06-01

    The exposure of charged microdroplets containing organic ions to solid-phase reagents at ambient surfaces results in heterogeneous ion/surface reactions. The electrosprayed droplets were driven pneumatically in ambient air and then electrically directed onto a surface coated with reagent. Using this reactive soft landing approach, acid-catalyzed Girard condensation was achieved at an ambient surface by directing droplets containing Girard T ions onto a dry keto-steroid. The charged droplet/surface reaction was much more efficient than the corresponding bulk solution-phase reaction performed on the same scale. The increase in product yield is ascribed to solvent evaporation, which causes moderate pH values in the starting droplet to reach extreme values and increases reagent concentrations. Comparisons are made with an experiment in which the droplets were pneumatically accelerated onto the ambient surface (reactive desorption electrospray ionization, DESI). The same reaction products were observed but differences in spatial distribution were seen associated with the "splash" of the high velocity DESI droplets. In a third type of experiment, the reactions of charged droplets with vapor phase reagents were examined by allowing electrosprayed droplets containing a reagent to intercept the headspace vapor of an analyte. Deposition onto a collector surface and mass analysis showed that samples in the vapor phase were captured by the electrospray droplets, and that instantaneous derivatization of the captured sample is possible in the open air. The systems examined under this condition included the derivatization of cortisone vapor with Girard T and that of 4-phenylpyridine N-oxide and 2-phenylacetophenone vapors with ethanolamine.

  13. Mass spectrometry imaging of cassette-dosed drugs for higher throughput pharmacokinetic and biodistribution analysis.

    PubMed

    Swales, John G; Tucker, James W; Strittmatter, Nicole; Nilsson, Anna; Cobice, Diego; Clench, Malcolm R; Mackay, C Logan; Andren, Per E; Takáts, Zoltán; Webborn, Peter J H; Goodwin, Richard J A

    2014-08-19

    Cassette dosing of compounds for preclinical drug plasma pharmacokinetic analysis has been shown to be a powerful strategy within the pharmaceutical industry for increasing throughput while decreasing the number of animals used. Presented here for the first time is data on the application of a cassette dosing strategy for label-free tissue distribution studies. The aim of the study was to image the spatial distribution of eight nonproprietary drugs (haloperidol, bufuralol, midazolam, clozapine, terfenadine, erlotinib, olanzapine, and moxifloxacin) in multiple tissues after oral and intravenous cassette dosing (four compounds per dose route). An array of mass spectrometry imaging technologies, including matrix-assisted laser desorption ionization mass spectrometry imaging (MALDI MSI), liquid extraction surface analysis tandem mass spectrometry (LESA-MS/MS), and desorption electrospray ionization mass spectrometry (DESI-MS) was used. Tissue analysis following intravenous and oral administration of discretely and cassette-dosed compounds demonstrated similar relative abundances across a range of tissues indicating that a cassette dosing approach was applicable. MALDI MSI was unsuccessful in detecting all of the target compounds; therefore, DESI MSI, a complementary mass spectrometry imaging technique, was used to detect additional target compounds. In addition, by adapting technology used for tissue profiling (LESA-MS/MS) low spatial resolution mass spectrometry imaging (∼1 mm) was possible for all targets across all tissues. This study exemplifies the power of multiplatform MSI analysis within a pharmaceutical research and development (R&D) environment. Furthermore, we have illustrated that the cassette dosing approach can be readily applied to provide combined, label-free pharmacokinetic and drug distribution data at an early stage of the drug discovery/development process while minimizing animal usage.

  14. Software tools of the Computis European project to process mass spectrometry images.

    PubMed

    Robbe, Marie-France; Both, Jean-Pierre; Prideaux, Brendan; Klinkert, Ivo; Picaud, Vincent; Schramm, Thorsten; Hester, Atfons; Guevara, Victor; Stoeckli, Markus; Roempp, Andreas; Heeren, Ron M A; Spengler, Bernhard; Gala, Olivier; Haan, Serge

    2014-01-01

    Among the needs usually expressed by teams using mass spectrometry imaging, one that often arises is that for user-friendly software able to manage huge data volumes quickly and to provide efficient assistance for the interpretation of data. To answer this need, the Computis European project developed several complementary software tools to process mass spectrometry imaging data. Data Cube Explorer provides a simple spatial and spectral exploration for matrix-assisted laser desorption/ionisation-time of flight (MALDI-ToF) and time of flight-secondary-ion mass spectrometry (ToF-SIMS) data. SpectViewer offers visualisation functions, assistance to the interpretation of data, classification functionalities, peak list extraction to interrogate biological database and image overlay, and it can process data issued from MALDI-ToF, ToF-SIMS and desorption electrospray ionisation (DESI) equipment. EasyReg2D is able to register two images, in American Standard Code for Information Interchange (ASCII) format, issued from different technologies. The collaboration between the teams was hampered by the multiplicity of equipment and data formats, so the project also developed a common data format (imzML) to facilitate the exchange of experimental data and their interpretation by the different software tools. The BioMap platform for visualisation and exploration of MALDI-ToF and DESI images was adapted to parse imzML files, enabling its access to all project partners and, more globally, to a larger community of users. Considering the huge advantages brought by the imzML standard format, a specific editor (vBrowser) for imzML files and converters from proprietary formats to imzML were developed to enable the use of the imzML format by a broad scientific community. This initiative paves the way toward the development of a large panel of software tools able to process mass spectrometry imaging datasets in the future.

  15. 3D-printed polylactic acid supports for enhanced ionization efficiency in desorption electrospray mass spectrometry analysis of liquid and gel samples.

    PubMed

    Elviri, Lisa; Foresti, Ruben; Bianchera, Annalisa; Silvestri, Marco; Bettini, Ruggero

    2016-08-01

    The potential of 3D printing technology was here exploited to prepare tailored polylactic acid (PLA) supports for desorption electrospray ionization (DESI) experiments. PLA rough solid supports presenting wells of different shape (i.e. cylindrical, cubic and hemispherical cavities) were designed to accommodate samples of different physical state. The potentials of such supports in terms of sample loading capacity, sensitivity, signal stability were tested by analysing a peptide (i.e. insulin) and an aminoglycoside antibiotic (i.e. gentamicin sulphate) from solution and a chitosan-based gel. The results obtained were compared with those obtained by using a traditional polytetrafluoroethylene (PTFE) support and discussed. By using PLA support on the flat side, signal intensity improved almost twice with respect to PTFE support, whereas with spherical wells a five times improved signal sensitivity and good stability (RSD<6%) were obtained for the analysis of two model molecules. Limits of detection were in the 3-10nM range and linearity was demonstrated for both analytes in the 0.05-0.5μM range for semi-quantitative or quantitative purposes. The use of a well and the set-up of optimal source parameters allowed the analysis of samples in a gel state with good precision (RSD<10%) and accuracy (86±6-102±9%), otherwise difficult to analyse on a flat smooth surface. These findings are of great interest and stimulus to exploit the advantages of 3D printing technology for the development of devices for a DESI source, presenting different shapes or configuration as a function of the sample types.

  16. The DECam Legacy Survey

    NASA Astrophysics Data System (ADS)

    Blum, Robert D.; Burleigh, Kaylan; Dey, Arjun; Schlegel, David J.; Meisner, Aaron M.; Levi, Michael; Myers, Adam D.; Lang, Dustin; Moustakas, John; Patej, Anna; Valdes, Francisco; Kneib, Jean-Paul; Huanyuan, Shan; Nord, Brian; Olsen, Knut A.; Delubac, Timothée; Saha, Abi; James, David; Walker, Alistair R.; DECaLS Team

    2016-06-01

    The DECam Legacy Survey (DECaLS) is conducting a 3-band imaging survey of the Sloan Digital Sky Survey (SDSS) extragalactic footprint as part of the Legacy Survey, which is associated with the Dark Energy Spectroscopic Instrument (DESI) redshift survey. The Legacy Survey covers 14000 square degrees in the g, r, and z bands and is being executed on the Blanco 4-m, Mayall 4-m, and Bok 2.3-m telescopes. For DECaLS, the Dark Energy Camera (DECam) will image the footprint overlapping SDSS in the region -20 < Dec < +30 deg, to depths of g=24.7, r=23.9, z=23.0 and will eventually cover a total of 7500 square degrees. The survey began in 2014 and will run through Spring 2017. Images and catalogs were introduced in Public Data Release 2 (DR2), which occurred in January 2016. The algorithm "Tractor" applies multi-wavelength forced photometry to DECam and WISE data to produce galaxy (and star) magnitudes (as well as shape and other information) for the catalogs. In total, the optical data in DR2 cover a disjoint footprint in 2078, 2141 and 5322 square degrees in g, r, and z bands, respectively; 1807 square degrees has been observed in all three optical filters. There are approximately 260 million unique sources in DR2 spread over 97,554 0.25 x 0.25 square degree bricks.The Dark Energy Spectroscopic Instrument (DESI) will observe 30+ million galaxies and quasars in a 14,000 square degree extragalactic footprint. The targeting in that footprint will be provided by a combination of these DECam data, the MOSAIC camera on the Mayall 4-meter, and the 90Prime camera on the Bok telescope.

  17. A new telescope control software for the Mayall 4-meter telescope

    NASA Astrophysics Data System (ADS)

    Abareshi, Behzad; Marshall, Robert; Gott, Shelby; Sprayberry, David; Cantarutti, Rolando; Joyce, Dick; Williams, Doug; Probst, Ronald; Reetz, Kristin; Paat, Anthony; Butler, Karen; Soto, Christian; Dey, Arjun; Summers, David

    2016-07-01

    The Mayall 4-meter telescope recently went through a major modernization of its telescope control system in preparation for DESI. We describe MPK (Mayall Pointing Kernel), our new software for telescope control. MPK outputs a 20Hz position-based trajectory with a velocity component, which feeds into Mayall's new servo system over a socket. We wrote a simple yet realistic servo simulator that let us develop MPK mostly without access to real hardware, and also lets us provide other teams with a Mayall simulator as test bed for development of new instruments. MPK has a small core comprised of prioritized, soft real-time threads. Access to the core's services is via MPK's main thread, a complete, interactive Tcl/Tk shell, which gives us the power and flexibility of a scripting language to add any other features, from GUIs, to modules for interaction with critical subsystems like dome or guider, to an API for networked clients of a new instrument (e.g., DESI). MPK is designed for long term maintainability: it runs on a stock computer and Linux OS, and uses only standard, open source libraries, except for commercial software that comes with source code in ANSI C/C++. We discuss the technical details of how MPK combines the Reflexxes motion library with the TCSpk/TPK pointing library to generically handle any motion requests, from slews to offsets to sidereal or non-sidereal tracking. We show how MPK calculates when the servos have reached a steady state. We also discuss our TPOINT modeling strategy and report performance results.

  18. Luminal cholinergic signalling in airway lining fluid: a novel mechanism for activating chloride secretion via Ca2+-dependent Cl− and K+ channels

    PubMed Central

    Hollenhorst, Monika I; Lips, Katrin S; Wolff, Miriam; Wess, Jürgen; Gerbig, Stefanie; Takats, Zoltan; Kummer, Wolfgang; Fronius, Martin

    2012-01-01

    BACKGROUND AND PURPOSE Recent studies detected the expression of proteins involved in cholinergic metabolism in airway epithelial cells, although the function of this non-neuronal cholinergic system is not known in detail. Thus, this study focused on the effect of luminal ACh as a regulator of transepithelial ion transport in epithelial cells. EXPERIMENTAL APPROACH RT-PCR experiments were performed using mouse tracheal epithelial cells for ChAT and organic cation transporter (OCT) transcripts. Components of tracheal airway lining fluid were analysed with desorption electrospray ionization (DESI) MS. Effects of nicotine on mouse tracheal epithelial ion transport were examined with Ussing-chamber experiments. KEY RESULTS Transcripts encoding ChAT and OCT1–3 were detected in mouse tracheal epithelial cells. The DESI experiments identified ACh in the airway lining fluid. Luminal ACh induced an immediate, dose-dependent increase in the transepithelial ion current (EC50: 23.3 µM), characterized by a transient peak and sustained plateau current. This response was not affected by the Na+-channel inhibitor amiloride. The Cl−-channel inhibitor niflumic acid or the K+-channel blocker Ba2+ attenuated the ACh effect. The calcium ionophore A23187 mimicked the ACh effect. Luminal nicotine or muscarine increased the ion current. Experiments with receptor gene-deficient animals revealed the participation of muscarinic receptor subtypes M1 and M3. CONCLUSIONS AND IMPLICATIONS The presence of luminal ACh and activation of transepithelial ion currents by luminal ACh receptors identifies a novel non-neuronal cholinergic pathway in the airway lining fluid. This pathway could represent a novel drug target in the airways. PMID:22300281

  19. Synchronous optical transmission data link integrated with FPGA for TESLA FEL SIMCON system: long data vector optical transceiver module tests

    NASA Astrophysics Data System (ADS)

    Zielinski, Jerzy S.; Pozniak, Krzysztof T.; Romaniuk, Ryszard S.

    2006-10-01

    The X-ray free-electron laser X-FEL that is being planned at the DESY research center in cooperation with European partners will produce high-intensity ultra-short X-ray flashes with the properties of laser light. This new light source, which can only be described in terms of superlatives, will open up a whole range of new possibilities for the natural sciences. It could also offer very promising opportunities for industrial users. SIMCON (SIMulator and CONtroller) is the project of the fast, low latency digital controller dedicated to the LLRF system in VUV FEL experiment. The main purpose of the project is to create a controller to stabilize the vector sum of fields in cavities of one cryo-module in the experiment. The device can be also used as the simulator of the cavity and test bench for other devices. The synchronic, optical link project was made for the accelerator X-FEL laser TESLA, the LLRF control system experiment at DESY, Hamburg. The control and diagnostic data is transmitted up to 2.5Gbit/s through a plastic fiber in a distance up to a few hundred meters. The link is synchronized once after power up, and never resynchronized when data is transmitted with maximum speed. The one way link bit error rate is less then 10 -15. The transceiver component written in VHDL that works in the dedicated Altera® Stratix® GX FPGA circuit. During the work in the PERG laboratory a 2.5Gbit/s serial link with the long vector parallel interface transceiver was created. Long-Data-Vector transceiver transmits 16bit vector each 8ns with 120ns latency.

  20. Developmental phases of individual mouse preimplantation embryos characterized by lipid signatures using desorption electrospray ionization mass spectrometry.

    PubMed

    Ferreira, Christina R; Pirro, Valentina; Eberlin, Livia S; Hallett, Judy E; Cooks, R Graham

    2012-12-01

    Knowledge of the lipids present in individual preimplantation embryos is of interest in fundamental studies of embryology, in attempts to understand cellular pluripotency and in optimization of in vitro culture conditions necessary for the application and development of biotechnologies such as in vitro fertilization and transgenesis. In this work, the profiles of fatty acids and phospholipids (PL) in individual mouse preimplantation embryos and oocytes were acquired using an analytical strategy based on desorption electrospray ionization mass spectrometry (DESI-MS). The methodology avoids sample preparation and provides information on the lipids present in these microscopic structures. Differences in the lipid profiles observed for unfertilized oocytes, two- and four-cell embryos, and blastocysts were characterized. For a representative set of embryos (N = 114) using multivariate analysis (specifically principal component analysis) unfertilized oocytes showed a narrower range of PL species than did blastocysts. Two- and four-cell embryos showed a wide range of PLs compared with unfertilized oocytes and high abundances of fatty acids, indicating pronounced synthetic activity. The data suggest that the lipid changes observed in mouse preimplantation development reflect acquisition of a degree of cellular membrane functional and structural specialization by the blastocyst stage. It is also noteworthy that embryos cultured in vitro from the two-cell through the blastocyst stage have a more homogeneous lipid profile as compared with their in vivo-derived counterparts, which is ascribed to the restricted diversity of nutrients present in synthetic culture media. The DESI-MS data are interpreted from lipid biochemistry and previous reports on gene expression of diverse lipids known to be vital to early embryonic development.

  1. Target allocation yields for massively multiplexed spectroscopic surveys with fibers

    SciTech Connect

    Saunders, Will; Smedley, Scott; Gillingham, Peter; Forero-Romero, Jaime E.; Jouvel, Stephanie; Nord, Brian

    2014-08-05

    We present Simulated Annealing fiber-to-target allocation simulations for the proposed DESI and 4MOST massively multiplexed spectroscopic surveys, and for both Poisson and realistically clustered mock target samples. We simulate both Echidna and theta-phi actuator designs, including the restrictions caused by the physical actuator characteristics during repositioning. For DESI, with theta-phi actuators, used in 5 passes over the sky for a mock ELG/LRG/QSO sample, with matched fiber and target densities, a total target allocation yield of 89.3% was achieved, but only 83.7% for the high-priority Ly-alpha QSOs. If Echidna actuators are used with the same pitch and number of passes, the yield increases by 5.7% and 16% respectively. Echidna also allows a factor-of-two increase in the number of close Ly-alpha QSO pairs that can be observed. Echidna spine tilt causes a variable loss of throughput, with average loss being the same as the loss at the rms tilt. With a natural tilt minimization scheme, we find an rms tilt always close to 0.58 x maximum. There is an additional but much smaller defocus loss, equivalent to an average defocus of 30microns. These tilt losses offset the gains in yield for Echidna, but because the survey strategy is driven by the higher priority targets, a clear survey speed advantage remains. For 4MOST, high and low latitude sample mock catalogs were supplied by the 4MOST team, and allocations were carried out with the proposed Echidna-based positioner geometry. At high latitudes, the resulting target completeness was 85.3% for LR targets and 78.9% for HR targets. At low latitude, the target completeness was 93.9% for LR targets and 71.2% for HR targets.

  2. The Mayall z-band Legacy Survey

    NASA Astrophysics Data System (ADS)

    Silva, David R.; Blum, Robert D.; Allen, Lori; Dey, Arjun; Schlegel, David J.; Lang, Dustin; Moustakas, John; Meisner, Aaron M.; Valdes, Francisco; Patej, Anna; Myers, Adam D.; Sprayberry, David; Saha, Abi; Olsen, Knut A.; Safonova, Sasha; Yang, Qian; Burleigh, Kaylan J.; MzLS Team

    2016-06-01

    The Mayall z-band Legacy Survey (MzLS) is conducting a deep z-band imaging survey covering 5000 square degrees in the north Galactic cap as part of the Legacy Survey, which is associated with the Dark Energy Spectroscopic Instrument (DESI) redshift survey. The Legacy Survey covers 14000 square degrees in the g, r, and z bands and is being executed on the Blanco 4-m, Mayall 4-m, and Bok 2.3-m telescopes. The MzLS footprint will be observed in the g and r bands using the Bok 2.3-m telescope also on Kitt Peak. The Beijing Arizona Sky Survey (BASS) is being conducted by a parallel team from Beijing and the University of Arizona. MzLS will cover the sky north of declination 30 degrees and reach a depth of z=23.0. The survey began in January 2016 and will run through June 2017 comprising approximately 230 nights on the Mayall telescope. The data are being obtained with an upgraded Mosaic camera that deploys with newred-sensitive CCDs from Lawrence Berkeley Lab (LBL) whose throughput is in excess of 80% at 8000 to approximately 9800 Angstrom. The upgrade project was a collaboration of Yale, LBL, and NOAO. MzLS images are public as soon as they are taken and delivered to the NOAO archive. Catalogs based on Tractor photometry for all available Legacy Survey images are released soon after they are constructed and MzLS sources will be included in next release planned for summer 2016. The Dark Energy Spectroscopic Instrument (DESI) will observe 30+ million galaxies and quasars in a 14,000 square degree extragalactic footprint. The targeting in that footprint will be provided by a combination of these MzLS data, DECam data from the DECam Legacy Survey, and data from the BASS survey.

  3. Mass Spectrometry Imaging under Ambient Conditions

    PubMed Central

    Wu, Chunping; Dill, Allison L.; Eberlin, Livia S.; Cooks, R. Graham; Ifa, Demian R.

    2012-01-01

    Mass spectrometry imaging (MSI) has emerged as an important tool in the last decade and it is beginning to show potential to provide new information in many fields owing to its unique ability to acquire molecularly specific images and to provide multiplexed information, without the need for labeling or staining. In MSI, the chemical identity of molecules present on a surface is investigated as a function of spatial distribution. In addition to now standard methods involving MSI in vacuum, recently developed ambient ionization techniques allow MSI to be performed under atmospheric pressure on untreated samples outside the mass spectrometer. Here we review recent developments and applications of MSI emphasizing the ambient ionization techniques of desorption electrospray ionization (DESI), laser ablation electrospray ionization (LAESI), probe electrospray ionization (PESI), desorption atmospheric pressure photoionization (DAPPI), femtosecond laser desorption ionization (fs-LDI), laser electrospray mass spectrometry (LEMS), infrared laser ablation metastable-induced chemical ionization (IR-LAMICI), liquid microjunction surface sampling probe mass spectrometry (LMJ-SSP MS), nanospray desorption electrospray ionization (nano-DESI), and plasma sources such as the low temperature plasma (LTP) probe and laser ablation coupled to flowing atmospheric-pressure afterglow (LA-FAPA). Included are discussions of some of the features of ambient MSI including the ability to implement chemical reactions with the goal of providing high abundance ions characteristic of specific compounds of interest and the use of tandem mass spectrometry to either map the distribution of targeted molecules with high specificity or to provide additional MS information in the structural identification of compounds. We also describe the role of bioinformatics in acquiring and interpreting the chemical and spatial information obtained through MSI, especially in biological applications for tissue

  4. Differential Lipid Profiles of Normal Human Brain Matter and Gliomas by Positive and Negative Mode Desorption Electrospray Ionization – Mass Spectrometry Imaging

    PubMed Central

    Pirro, Valentina; Hattab, Eyas M.; Cohen-Gadol, Aaron A.; Cooks, R. Graham

    2016-01-01

    Desorption electrospray ionization—mass spectrometry (DESI-MS) imaging was used to analyze unmodified human brain tissue sections from 39 subjects sequentially in the positive and negative ionization modes. Acquisition of both MS polarities allowed more complete analysis of the human brain tumor lipidome as some phospholipids ionize preferentially in the positive and others in the negative ion mode. Normal brain parenchyma, comprised of grey matter and white matter, was differentiated from glioma using positive and negative ion mode DESI-MS lipid profiles with the aid of principal component analysis along with linear discriminant analysis. Principal component–linear discriminant analyses of the positive mode lipid profiles was able to distinguish grey matter, white matter, and glioma with an average sensitivity of 93.2% and specificity of 96.6%, while the negative mode lipid profiles had an average sensitivity of 94.1% and specificity of 97.4%. The positive and negative mode lipid profiles provided complementary information. Principal component–linear discriminant analysis of the combined positive and negative mode lipid profiles, via data fusion, resulted in approximately the same average sensitivity (94.7%) and specificity (97.6%) of the positive and negative modes when used individually. However, they complemented each other by improving the sensitivity and specificity of all classes (grey matter, white matter, and glioma) beyond 90% when used in combination. Further principal component analysis using the fused data resulted in the subgrouping of glioma into two groups associated with grey and white matter, respectively, a separation not apparent in the principal component analysis scores plots of the separate positive and negative mode data. The interrelationship of tumor cell percentage and the lipid profiles is discussed, and how such a measure could be used to measure residual tumor at surgical margins. PMID:27658243

  5. Combining two-dimensional diffusion-ordered nuclear magnetic resonance spectroscopy, imaging desorption electrospray ionization mass spectrometry, and direct analysis in real-time mass spectrometry for the integral investigation of counterfeit pharmaceuticals.

    PubMed

    Nyadong, Leonard; Harris, Glenn A; Balayssac, Stéphane; Galhena, Asiri S; Malet-Martino, Myriam; Martino, Robert; Parry, R Mitchell; Wang, May Dongmei; Fernández, Facundo M; Gilard, Véronique

    2009-06-15

    During the past decade, there has been a marked increase in the number of reported cases involving counterfeit medicines in developing and developed countries. Particularly, artesunate-based antimalarial drugs have been targeted, because of their high demand and cost. Counterfeit antimalarials can cause death and can contribute to the growing problem of drug resistance, particularly in southeast Asia. In this study, the complementarity of two-dimensional diffusion-ordered (1)H nuclear magnetic resonance spectroscopy (2D DOSY (1)H NMR) with direct analysis in real-time mass spectrometry (DART MS) and desorption electrospray ionization mass spectrometry (DESI MS) was assessed for pharmaceutical forensic purposes. Fourteen different artesunate tablets, representative of what can be purchased from informal sources in southeast Asia, were investigated with these techniques. The expected active pharmaceutical ingredient was detected in only five formulations via both nuclear magnetic resonance (NMR) and mass spectrometry (MS) methods. Common organic excipients such as sucrose, lactose, stearate, dextrin, and starch were also detected. The graphical representation of DOSY (1)H NMR results proved very useful for establishing similarities among groups of samples, enabling counterfeit drug "chemotyping". In addition to bulk- and surface-average analyses, spatially resolved information on the surface composition of counterfeit and genuine antimalarial formulations was obtained using DESI MS that was performed in the imaging mode, which enabled one to visualize the homogeneity of both genuine and counterfeit drug samples. Overall, this study suggests that 2D DOSY (1)H NMR, combined with ambient MS, comprises a powerful suite of instrumental analysis methodologies for the integral characterization of counterfeit antimalarials.

  6. Pseudomonas putida attunes morphophysiological, biochemical and molecular responses in Cicer arietinum L. during drought stress and recovery.

    PubMed

    Tiwari, Shalini; Lata, Charu; Chauhan, Puneet Singh; Nautiyal, Chandra Shekhar

    2016-02-01

    Drought is one of the most important abiotic stresses that adversely affect plant growth and yield potential. However, some drought resistant rhizosphere competent bacteria are known to improve plant health and promote growth during abiotic stresses. Present study showed the role of Pseudomonas putida MTCC5279 (RA) in ameliorating drought stress on cv. BG-362 (desi) and cv. BG-1003 (kabuli) chickpea cultivars under in vitro and green house conditions. Polyethylene glycol-induced drought stress severely affected seed germination in both cultivars which was considerably improved on RA-inoculation. Drought stress significantly affected various growth parameters, water status, membrane integrity, osmolyte accumulation, ROS scavenging ability and stress-responsive gene expressions, which were positively modulated upon application of RA in both chickpea cultivars. Quantitative real-time (qRT)-PCR analysis showed differential expression of genes involved in transcription activation (DREB1A and NAC1), stress response (LEA and DHN), ROS scavenging (CAT, APX, GST), ethylene biosynthesis (ACO and ACS), salicylic acid (PR1) and jasmonate (MYC2) signalling in both chickpea cultivars exposed to drought stress and recovery in the presence or absence of RA. The observations imply that RA confers drought tolerance in chickpea by altering various physical, physiological and biochemical parameters, as well as by modulating differential expression of at least 11 stress-responsive genes. To the best of our knowledge, this is the first report on detailed analysis of plant growth promotion and stress alleviation in one month old desi and kabuli chickpea subjected to drought stress for 0, 1, 3 and 7 days and recovery in the presence of a PGPR.

  7. Online Investigation of Aqueous-Phase Electrochemical Reactions by Desorption Electrospray Ionization Mass Spectrometry

    NASA Astrophysics Data System (ADS)

    Lu, Mei; Liu, Yong; Helmy, Roy; Martin, Gary E.; Dewald, Howard D.; Chen, Hao

    2015-08-01

    Electrochemistry (EC) combined with mass spectrometry (MS) is a powerful tool for elucidation of electrochemical reaction mechanisms. However, direct online analysis of electrochemical reaction in aqueous phase was rarely explored. This paper presents the online investigation of several electrochemical reactions with biological relevance in the aqueous phase, such as nitrosothiol reduction, carbohydrate oxidation, and carbamazepine oxidation using desorption electrospray ionization mass spectrometry (DESI-MS). It was found that electroreduction of nitrosothiols [e.g., nitrosylated insulin B (13-23)] leads to free thiols by loss of NO, as confirmed by online MS analysis for the first time. The characteristic mass shift of 29 Da and the reduced intensity provide a quick way to identify nitrosylated species. Equally importantly, upon collision-induced dissociation (CID), the reduced peptide ion produces more fragment ions than its nitrosylated precursor ion (presumably the backbone fragmentation cannot compete with the facile NO loss for the precursor ion), thus facilitating peptide sequencing. In the case of saccharide oxidation, it was found that glucose undergoes electro-oxidation to produce gluconic acid at alkaline pH, but not at neutral and acidic pHs. Such a pH-dependent electrochemical behavior was also observed for disaccharides such as maltose and cellobiose. Upon electrochemical oxidation, carbamazepine was found to undergo ring contraction and amide bond cleavage, which parallels the oxidative metabolism observed for this drug in leucocytes. The mechanistic information of these redox reactions revealed by EC/DESI-MS would be of value in nitroso-proteome research and carbohydrate/drug metabolic studies.

  8. Online Investigation of Aqueous-Phase Electrochemical Reactions by Desorption Electrospray Ionization Mass Spectrometry.

    PubMed

    Lu, Mei; Liu, Yong; Helmy, Roy; Martin, Gary E; Dewald, Howard D; Chen, Hao

    2015-10-01

    Electrochemistry (EC) combined with mass spectrometry (MS) is a powerful tool for elucidation of electrochemical reaction mechanisms. However, direct online analysis of electrochemical reaction in aqueous phase was rarely explored. This paper presents the online investigation of several electrochemical reactions with biological relevance in the aqueous phase, such as nitrosothiol reduction, carbohydrate oxidation, and carbamazepine oxidation using desorption electrospray ionization mass spectrometry (DESI-MS). It was found that electroreduction of nitrosothiols [e.g., nitrosylated insulin B (13-23)] leads to free thiols by loss of NO, as confirmed by online MS analysis for the first time. The characteristic mass shift of 29 Da and the reduced intensity provide a quick way to identify nitrosylated species. Equally importantly, upon collision-induced dissociation (CID), the reduced peptide ion produces more fragment ions than its nitrosylated precursor ion (presumably the backbone fragmentation cannot compete with the facile NO loss for the precursor ion), thus facilitating peptide sequencing. In the case of saccharide oxidation, it was found that glucose undergoes electro-oxidation to produce gluconic acid at alkaline pH, but not at neutral and acidic pHs. Such a pH-dependent electrochemical behavior was also observed for disaccharides such as maltose and cellobiose. Upon electrochemical oxidation, carbamazepine was found to undergo ring contraction and amide bond cleavage, which parallels the oxidative metabolism observed for this drug in leucocytes. The mechanistic information of these redox reactions revealed by EC/DESI-MS would be of value in nitroso-proteome research and carbohydrate/drug metabolic studies.

  9. [Men as caregivers for their wives - two phenomenological studies of the experiences of male primary caregivers in home care arrangements. Part II: men as caregivers for their wives suffering from dementia].

    PubMed

    Bauernschmidt, Dorothee; Dorschner, Stephan

    2014-10-01

    Hintergrund: Männer engagieren sich in Deutschland zunehmend in der vielfältigen Pflege- und Sorgearbeit für pflegebedürftige Angehörige. Der steigenden Zahl männlicher Hauptpflegepersonen wird der (pflege-)wissenschaftliche Diskurs jedoch noch nicht gerecht. Ziel: Im Mittelpunkt der zweiten Studie stehen pflegende Ehemänner, die ihre an Demenz erkrankte Frau im häuslichen Pflegesetting versorgen. Ziel der Studie ist es, Erkenntnisse darüber zu gewinnen, wie diese Männer die Pflegesituation erleben und gestalten. Methode: Es wurden narrative Interviews mit zehn pflegenden Ehegatten geführt und einer phänomenologisch-interpretativen Analyse in Anlehnung an das Analyseschema von Diekelmann (1992) unterzogen. Ergebnisse: Es konnten sieben zentrale Themen – «Demenz ist eine schlimme Krankheit …» (Krankheit als schleichende Krise); «Da ist doch eine Bindung …» (Beziehung); «Streit, der sich nicht so ohne weiteres lösen lässt …» (Konflikt); «Von dem ist nichts mehr …» (Verlust); «Die Pflege, die wurde nicht weniger, die wurde mehr …» (Pflege); «Die Welt wird kleiner …» (Einschränkungen); «Ich hab das nicht ungern, dass mir jemand hilft …» (Unterstützung) – sowie das konstitutive Muster «Gebundensein» in der lebensweltlichen Wahrnehmung identifiziert werden. Schlussfolgerungen: Die Individualität im Erleben und Gestalten der Pflegesituation durch die pflegenden Männer und deren Bewertung formeller Unterstützungsangebote zeigen deutlichen Entwicklungsbedarf in der Ausgestaltung beruflicher Pflege im häuslichen Umfeld. Weitere Forschungsprojekte sollten insbesondere Pflegeverläufe (auch über längere Zeiträume) sowie Gründe für die Ablehnung von Unterstützungsangeboten in den Blick nehmen.

  10. The scholar role in the National Competence Based Catalogues of Learning Objectives for Undergraduate Medical Education (NKLM) compared to other international frameworks.

    PubMed

    Hautz, Stefanie C; Hautz, Wolf E; Keller, Niklas; Feufel, Markus A; Spies, Claudia

    2015-01-01

    Hintergrund: In Deutschland haben die Gesellschaft für Medizinische Ausbildung (GMA) und der Medizinische Fakultätentag (MFT) den Nationalen Kompetenzbasierten Lernzielkatalog Medizin (NKLM) federführend entwickelt. Dieser beschreibt, wie viele internationale Pendants, detailliert Qualifikationen für Absolventen des Medizinstudiums. Die Definition derartiger Rahmenwerke folgt der Bestrebung, Ausbildungsinhalte den Lehrenden und Lernenden sowie der Gesellschaft transparent darzustellen. Der NKLM ergänzt die Listen von Themen aus Gegenstandskatalogen durch eine Sammlung erlernbarer Kompetenzen. Alle Rahmenwerke sind dabei entweder in Kapitel oder Domänen oder nach ärztlichen Rollen gegliedert. Dabei wirft die Definition der Gelehrten-Rolle zahlreiche Fragen auf, wie Studien gezeigt haben: Welcher Unterschied besteht zwischen den notwendigen Qualifikationen als wissenschaftlich qualifizierter Arzt und denen als ärztlicher Wissenschaftler? Wie werden die Schwerpunkte gesetzt und wie unterscheiden sie sich im internationalen Vergleich?Methode: In einer systematischen, dreistufigen Recherche wurden 13 internationale Rahmenwerke identifiziert und deren Inhalte durch eine qualitative Textanalyse mit den Inhalten der Gelehrten-Rolle des NKLM verglichen. Die drei Stufen umfassen (1) die systematische Suche, (2) die transparente Auswahl publizierter Rahmenwerke (in- und exclusion) und (3) die Datenextraktion, Kategorisierung und Validierung. Die Ergebnisse daraus wurden mit der Gelehrten-Rolle des NKLM verglichen.Ergebnisse: Die extrahierten Inhalte aller Rahmenwerke lassen sich in die Komponenten Gemeinsame Grundlagen, Klinische Anwendung, Forschung, Lehren und Bilden, sowie Lebenslanges Lernen gliedern. Im Unterschied zu den verglichenen Rahmenwerken betont der NKLM die zum Forschen und Lehren notwendigen Kompetenzen, während die klinische Anwendung eine vergleichsweise untergeordnete Rolle spielt. Schlussfolgerung: Die Inhalte der Gelehrtenrolle des NKLM

  11. Aspects of vulnerable patients and informed consent in clinical trials.

    PubMed

    Kuthning, Maria; Hundt, Ferdinand

    2013-01-01

    Ziel: Diskussion der Aspekte der Einwilligung schutzbedürftiger Patienten nach Aufklärung zur Teilnahme an klinischen Prüfungen aus europäischem und deutschem Blick.Methoden: Wissenschaftliche Literaturrecherche via PubMed, Medline und Google. Ergebnis: Das freiwillige Einverständnis ist ein Eckpfeiler aller Regularien von klinischen Prüfungen. Einen Patienten in eine klinische Prüfung aufzunehmen, ohne zuvor die mit seiner Unterschrift versehene schriftliche Einverständnis eingeholt zu haben, ist als schwerwiegendes Fehlverhalten anzusehen. Die Entstehung ethischer Leitlinien begann bereits vor christlicher Zeitrechnung mit dem Hippokratischen Eid. In allen danach für die klinische Forschung entwickelten Leitlinien wird verdeutlicht, dass eine Hauptfunktion der Einwilligung nach Aufklärung die Sicherstellung der Willensfreiheit ist, um auch so das Wohl der Teilnehmer in klinischen Prüfungen sicherzustellen. Minderjährigen ist es nicht möglich ein diesbezüglich bindendes Einverständnis zu geben, dieses Problem wird durch eine Kombination von elterlicher Zustimmung sowie soweit möglich der Einwilligung des Minderjährigen adressiert. Analphabetismus ist betreffs der informierten Einwilligung ein kritischer Aspekt, der die ganze Welt betrifft. Er existiert in allen Gesellschaften, allen Bevölkerungsschichten und in jeder Altersgruppe. Um die Kommunikation mit diesen Patienten zu verbessern, können neue Strategien mittels Verwendung von Videotapes oder animierten Illustrationen und Trickfilmen gelehrt werden. Letztlich scheint die mit dem potentiellen Teilnehmer verbrachte Zeit der beste Weg zu sein, um die Verständigung zu verbessern.Schlussfolgerung: Die Erforschung lebensrettender und lebensverbessernder neuer Behandlungen erfordert eine Partnerschaft, die auf guter Kommunikation und Vertrauen zwischen Patienten und Forschern, Sponsoren, Ethikkommissionen, Behörden, Juristen und Politikern basiert, damit auch schutzbedürftige Patienten ohne

  12. Three-Dimensional Imaging of Lipids and Metabolites in Tissues by Nanospray Desorption Electrospray Ionization Mass Spectrometry

    SciTech Connect

    Lanekoff, Ingela T.; Burnum-Johnson, Kristin E.; Thomas, Mathew; Cha, Jeeyeon; Dey, Sudhansu K.; yang, Pengxiang; Prieto, Mari; Laskin, Julia

    2015-03-01

    Abstract Three-dimensional (3D) imaging of tissue sections is a new frontier in mass spectrometry imaging (MSI). Here we report on fast 3D imaging of lipids and metabolites associated with mouse uterine decidual cells and embryo at the implantation site on day 6 of pregnancy. 2D imaging of 16-20 serial tissue sections deposited on the same glass slide was performed using nanospray desorption electrospray ionization (nano-DESI) – an ambient ionization technique that enables sensitive localized analysis of analytes on surfaces without special sample pre-treatment. In this proof-of-principle study, nano-DESI was coupled to a high-resolution Q-Exactive instrument operated at high repetition rate of >5 Hz with moderate mass resolution of 35,000 (m/Δm at m/z 200), which enabled acquisition of the entire 3D image with a spatial resolution of ~150 μm in less than 4.5 hours. The results demonstrate localization of acetylcholine in the primary decidual zone (PDZ) of the implantation site throughout the depth of the tissue examined, indicating an important role of this signaling molecule in decidualization. Choline and phosphocholine – metabolites associated with cell growth – are enhanced in the PDZ and abundant in other cellular regions of the implantation site. Very different 3D distributions were obtained for fatty acids (FA), oleic acid and linoleic acid (FA 18:1 and FA 18:2), differing only by one double bond. Localization of FA 18:2 in the PDZ indicates its important role in decidualization while FA 18:1 is distributed more evenly throughout the tissue. In contrast, several lysophosphatidylcholines (LPC) observed in this study show donut-like distributions with localization around the PDZ. Complementary distributions with minimal overlap were observed for LPC 18:0 and FA 18:2 while the 3D image of the potential precursor phosphatidylcholine (PC 36:2) showed a significant overlap with both LPC 18:0 and FA 18:2.

  13. Target allocation yields for massively multiplexed spectroscopic surveys with fibers

    NASA Astrophysics Data System (ADS)

    Saunders, Will; Smedley, Scott; Gillingham, Peter; Forero-Romero, Jaime E.; Jouvel, Stephanie; Nord, Brian

    2014-08-01

    We present Simulated Annealing fiber-to-target allocation simulations for the proposed DESI and 4MOST massively multiplexed spectroscopic surveys. We simulate various survey strategies, for both Poisson and realistically clustered mock target samples. We simulate both Echidna and theta-phi actuator designs, including the restrictions caused by the physical actuator characteristics during repositioning. For DESI, with theta-phi actuators, used in 5 passes over the sky for a mock ELG/LRG/QSO sample, with matched fiber and target densities, a total target allocation yield of 89.3% was achieved, but only 83.7% for the high-priority Ly-alpha QSOs. If Echidna actuators are used with the same pitch and number of passes, the yield increases to 94.4% and 97.2% respectively, representing fractional gains of 5.7% and 16% respectively. Echidna also allows a factor-of-two increase in the number of close Ly-alpha QSO pairs that can be observed. Echidna spine tilt causes a variable loss of throughput, with average loss being the same as the loss at the rms tilt. The simulated annealing allows spine tilt minimization to be included in the optimization, at some small cost to the yield. With a natural minimization scheme, we find an rms tilt always close to 0.58 x maximum. There is an additional but much smaller defocus loss, equivalent to an average defocus of 30 μm. These tilt losses offset the gains in yield for Echidna, but because the survey strategy is driven by the higher priority targets, a clear survey speed advantage remains. For 4MOST, high and low latitude sample mock catalogs were supplied by the 4MOST team, and allocations were carried out with the proposed Echidna-based positioner geometry. At high latitudes, the resulting target completeness was 85.3% for LR targets and 78.9% for HR targets. At low latitude, the target completeness was 93.9% for LR targets and 71.2% for HR targets.

  14. Collision-free coordination of fiber positioners in multi-object spectrographs

    NASA Astrophysics Data System (ADS)

    Makarem, Laleh; Kneib, Jean-Paul; Gillet, Denis

    2016-07-01

    Many fiber-fed spectroscopic survey projects, such as DESI, PFS and MOONS, will use thousands of fiber positioners packed at a focal plane. To maximize observation time, the positioners need to move simultaneously and reach their targets swiftly. We have previously presented a motion planning method based on a decentralized navigation function for the collision-free coordination of the fiber positioners in DESI. In MOONS, the end effector of each positioner handling the fiber can reach the centre of its neighbours. There is therefore a risk of collision with up to 18 surrounding positioners in the chosen dense hexagonal configuration. Moreover, the length of the second arm of the positioner is almost twice the length of the first one. As a result, the geometry of the potential collision zone between two positioners is not limited to the extremity of their end-effector, but surrounds the second arm. In this paper, we modify the navigation function to take into account the larger collision zone resulting from the extended geometrical shape of the positioners. The proposed navigation function takes into account the configuration of the positioners as well as the constraints on the actuators, such as their maximal velocity and their mechanical clearance. Considering the fact that all the positioners' bases are fixed to the focal plane, collisions can occur locally and the risk of collision is limited to the 18 surrounding positioners. The decentralizing motion planning and trajectory generation takes advantage of this limited number of positioners and the locality of collisions, hence significantly reduces the complexity of the algorithm to a linear order. The linear complexity ensures short computation time. In addition, the time needed to move all the positioners to their targets is independent of the number of positioners. These two key advantages of the chosen decentralization approach turn this method to a promising solution for the collision-free motion

  15. Risk factors associated with prevalence and major bacterial causes of mastitis in dromedary camels (Camelus dromedarius) under different production systems.

    PubMed

    Ahmad, Sibtain; Yaqoob, Muhammad; Bilal, Muhammad Qamar; Muhammad, Ghulam; Yang, Li-Guo; Khan, Muhammad Kasib; Tariq, Muhammad

    2012-01-01

    A cross-sectional study was conducted in desert environment of Jhang (Pakistan) from November 2008 to October 2009 on she-camels kept under pastoralist conditions to determine the prevalence of mastitis, impact of risk factors, and isolate the dominant mastitis-causing bacteria on total of 150 lactating she-camels by using clinical examination and surf field mastitis test. From the 150 she-camels examined, 69 (46%) were positive for mastitis at animal level, 12 (8%) clinical, and 57 (38%) subclinical. Age, parity number, stage of lactation, breed, production system, hygiene of milking process, and presence of lesion on udder/teat were found significantly associated (p<0.05) with the prevalence of mastitis in she-camels. There was the lowest prevalence (33.33%; 15 of 45) of mastitis in she-camels of 5-7 years of age, while the highest (80%; 12 of 15) in the animals aged between 14 to 16 years. Stage of lactation significantly affected (p<0.05) and was found to be associated with the prevalence of mastitis being the highest (54.55%; 18 of 33) during the initial stage of lactation (0 to 1 month) followed by last 2 months (10-12 months) as 54.17% and mid-stages (1-3 and 3-10 months) of lactation as 28.57% (6 of 21) and 37.50% (9 of 24), respectively. According to breed of camels, it was noted that the prevalence of mastitis affected significantly (p<0.05) being the highest in crossbred (Desi × Mareecha) as 51.39% (37 of 72) followed in order by Mareecha and Desi as 43.14% and 37.04%, respectively. Staphylococcus (42.19%) and Streptococcus (15.63%) genera were the dominant isolates identified. Good hygiene in milking process, milking clinically infected she-camels at last, culling chronic mastitis carriers, treating clinically infected she-camels, and dry period therapy could reduce the prevalence of contagious mastitis in the study area.

  16. Hydroforming of elliptical cavities

    NASA Astrophysics Data System (ADS)

    Singer, W.; Singer, X.; Jelezov, I.; Kneisel, P.

    2015-02-01

    Activities of the past several years in developing the technique of forming seamless (weldless) cavity cells by hydroforming are summarized. An overview of the technique developed at DESY for the fabrication of single cells and multicells of the TESLA cavity shape is given and the major rf results are presented. The forming is performed by expanding a seamless tube with internal water pressure while simultaneously swaging it axially. Prior to the expansion the tube is necked at the iris area and at the ends. Tube radii and axial displacements are computer controlled during the forming process in accordance with results of finite element method simulations for necking and expansion using the experimentally obtained strain-stress relationship of tube material. In cooperation with industry different methods of niobium seamless tube production have been explored. The most appropriate and successful method is a combination of spinning or deep drawing with flow forming. Several single-cell niobium cavities of the 1.3 GHz TESLA shape were produced by hydroforming. They reached accelerating gradients Eacc up to 35 MV /m after buffered chemical polishing (BCP) and up to 42 MV /m after electropolishing (EP). More recent work concentrated on fabrication and testing of multicell and nine-cell cavities. Several seamless two- and three-cell units were explored. Accelerating gradients Eacc of 30 - 35 MV /m were measured after BCP and Eacc up to 40 MV /m were reached after EP. Nine-cell niobium cavities combining three three-cell units were completed at the company E. Zanon. These cavities reached accelerating gradients of Eacc=30 - 35 MV /m . One cavity is successfully integrated in an XFEL cryomodule and is used in the operation of the FLASH linear accelerator at DESY. Additionally the fabrication of bimetallic single-cell and multicell NbCu cavities by hydroforming was successfully developed. Several NbCu clad single-cell and double-cell cavities of the TESLA shape have been

  17. Ethanol extracts of chickpeas alter the total lipid content and expression levels of genes related to fatty acid metabolism in mouse 3T3-L1 adipocytes.

    PubMed

    Shinohara, Shigeo; Gu, Yuanjun; Yang, Ying; Furuta, Yasuo; Tanaka, Masahiko; Yue, Xiaohua; Wang, Weiqing; Kitano, Masaru; Kimura, Hiroshi

    2016-08-01

    Desi-type chickpeas, which have long been used as a natural treatment for diabetes, have been reported to lower visceral adiposity, dyslipidemia and insulin resistance induced by a chronic high-fat diet in rats. In this study, in order to examine the effects of chickpeas of this type in an in vitro system, we used the 3T3-L1 mouse cell line, a subclone of Swiss 3T3 cells, which can differentiate into cells with an adipocyte-like phenotype, and we used ethanol extracts of chickpeas (ECP) instead of chickpeas. Treatment of the 3T3-L1 cells with ECP led to a decrease in the lipid content in the cells. The desaturation index, defined as monounsaturated fatty acids (MUFAs)/saturated fatty acids (SFAs), was also decreased by ECP due to an increase in the cellular content of SFAs and a decrease in the content of MUFAs. The decrease in this index may reflect a decreased reaction from SFA to MUFA, which is essential for fat storage. To confirm this hypothesis, we conducted a western blot analysis, which revealed a reduction in the amount of stearoyl-CoA desaturase 1 (SCD1), a key enzyme catalyzing the reaction from SFA to MUFA. We observed simultaneous inactivations of enzymes participating in lipogenesis, i.e., liver kinase B1 (LKB1), acetyl-CoA carboxylase (ACC) and AMPK, by phosphorylation, which may lead to the suppression of reactions from acetyl-CoA to SFA via malonyl-CoA in lipogenesis. We also investigated whether lipolysis is affected by ECP. The amount of carnitine palmitoyltransferase 1 (CPT1), an enzyme important for the oxidation of fatty acids, was increased by ECP treatment. ECP also led to an increase in uncoupling protein 2 (UCP2), reported as a key protein for the oxidation of fatty acids. All of these results obtained regarding lipogenesis and fatty acid metabolism in our in vitro system are consistent with the results previously shown in rats. We also examined the effects on SCD1 and lipid contents of ethanol extracts of Kabuli

  18. Employing genome-wide SNP discovery and genotyping strategy to extrapolate the natural allelic diversity and domestication patterns in chickpea.

    PubMed

    Kujur, Alice; Bajaj, Deepak; Upadhyaya, Hari D; Das, Shouvik; Ranjan, Rajeev; Shree, Tanima; Saxena, Maneesha S; Badoni, Saurabh; Kumar, Vinod; Tripathi, Shailesh; Gowda, C L L; Sharma, Shivali; Singh, Sube; Tyagi, Akhilesh K; Parida, Swarup K

    2015-01-01

    The genome-wide discovery and high-throughput genotyping of SNPs in chickpea natural germplasm lines is indispensable to extrapolate their natural allelic diversity, domestication, and linkage disequilibrium (LD) patterns leading to the genetic enhancement of this vital legume crop. We discovered 44,844 high-quality SNPs by sequencing of 93 diverse cultivated desi, kabuli, and wild chickpea accessions using reference genome- and de novo-based GBS (genotyping-by-sequencing) assays that were physically mapped across eight chromosomes of desi and kabuli. Of these, 22,542 SNPs were structurally annotated in different coding and non-coding sequence components of genes. Genes with 3296 non-synonymous and 269 regulatory SNPs could functionally differentiate accessions based on their contrasting agronomic traits. A high experimental validation success rate (92%) and reproducibility (100%) along with strong sensitivity (93-96%) and specificity (99%) of GBS-based SNPs was observed. This infers the robustness of GBS as a high-throughput assay for rapid large-scale mining and genotyping of genome-wide SNPs in chickpea with sub-optimal use of resources. With 23,798 genome-wide SNPs, a relatively high intra-specific polymorphic potential (49.5%) and broader molecular diversity (13-89%)/functional allelic diversity (18-77%) was apparent among 93 chickpea accessions, suggesting their tremendous applicability in rapid selection of desirable diverse accessions/inter-specific hybrids in chickpea crossbred varietal improvement program. The genome-wide SNPs revealed complex admixed domestication pattern, extensive LD estimates (0.54-0.68) and extended LD decay (400-500 kb) in a structured population inclusive of 93 accessions. These findings reflect the utility of our identified SNPs for subsequent genome-wide association study (GWAS) and selective sweep-based domestication trait dissection analysis to identify potential genomic loci (gene-associated targets) specifically regulating

  19. Production of Seamless Superconducting Radio Frequency Cavities from Ultra-fine Grained Niobium, Phase II Final Report

    SciTech Connect

    Roy Crooks, Ph.D., P.E.

    2009-10-31

    The positron and electron linacs of the International Linear Collider (ILC) will require over 14,000, nine-cell, one meter length, superconducting radio frequency (SRF) cavities [ILC Reference Design Report, 2007]. Manufacturing on this scale will benefit from more efficient fabrication methods. The current methods of fabricating SRF cavities involve deep drawing of the halves of each of the elliptical cells and joining them by high-vacuum, electron beam welding, with at least 19 circumferential welds per cavity. The welding is costly and has undesirable effects on the cavity surfaces, including grain-scale surface roughening at the weld seams. Hydroforming of seamless tubes avoids welding, but hydroforming of coarse-grained seamless tubes results in strain-induced surface roughening. Surface roughness limits accelerating fields, because asperities prematurely exceed the critical magnetic field and become normal conducting. This project explored the technical and economic feasibility of an improved processing method for seamless tubes for hydroforming. Severe deformation of bulk material was first used to produce a fine structure, followed by extrusion and flow-forming methods of tube making. Extrusion of the randomly oriented, fine-grained bulk material proceeded under largely steady-state conditions, and resulted in a uniform structure, which was found to be finer and more crystallographically random than standard (high purity) RRR niobium sheet metal. A 165 mm diameter billet of RRR grade niobium was processed into five, 150 mm I.D. tubes, each over 1.8 m in length, to meet the dimensions used by the DESY ILC hydroforming machine. Mechanical properties met specifications. Costs of prototype tube production were approximately twice the price of RRR niobium sheet, and are expected to be comparable with economies of scale. Hydroforming and superconducting testing will be pursued in subsequent collaborations with DESY and Fermilab. SRF Cavities are used to construct

  20. Bioaugmentation of Mesorhizobium cicer, Pseudomonas spp. and Piriformospora indica for Sustainable Chickpea Production.

    PubMed

    Mansotra, Pallavi; Sharma, Poonam; Sharma, Sunita

    2015-07-01

    Chickpea establishes symbiotic association with Mesorhizobium to fulfill its nitrogen (N) requirement. Integrating chickpea rhizosphere with potential native mesorhizobia and other plant growth promoting microorganisms can contribute multiple benefits to plants. The present investigation was undertaken to study interactions among Piriformospora indica (PI) with potential plant growth promoting rhizobacteria (PGPR) viz. Pseudomonas argentinensis (LPGPR1), Pseudomonas sp. (LPGPR2) along with national check Pseudomons sp. (LK884) and Mesorhizobium cicer (LGR33, MR) to examine the synergistic effect of consortium for improving growth, symbiotic efficiency, nutrient acquisition and yield in two chickpea (Cicer arietinum L.) varieties viz. desi PBG1 and kabuli BG1053. In-vitro, seed germination with consortium MR + PI + LPGPR1 was the best compatible treatment followed by MR + PI + LK884 and MR + PI + LPGPR2. Significant improvement in the growth, symbiotic parameters and grain yield was observed with MR + PI + LPGPR1 and MR + PI + LK884 treatments. Significantly high chlorophyll and leghaemoglobin content was recorded with MR + PI + LPGPR1 (1.57 and 1.64 mg g(-1) fresh weight of leaves and 5.19 and 4.39 mg/g(-1) fresh weight of nodules) in desi PBG1 and kabuli BG1053 chickpea varieties, respectively. At 90 DAS, MR + PI + LPGPR1 treatment significantly improved nodule dry weight (ranged between 84.0 and 141.7 mg plant(-1)) as compared to MR alone treatment (ranged between 62.3 and 123.3 mg plant(-1)). Data revealed significant increase in total nitrogen (N) and phosphorus (P) content of shoot with MR + PI + LPGPR1 by 1.2 and 1.5 fold, respectively over MR alone treatment. On the basis of overall mean, MR + PI + LPGPR1 significantly improved the yield by 8.2 % over Mesorhizobium alone application. It seems from foregoing study that tripartite combination of different micro-organisms can be

  1. Hydroforming of elliptical cavities

    DOE PAGES

    Singer, W.; Singer, X.; Jelezov, I.; ...

    2015-02-27

    Activities of the past several years in developing the technique of forming seamless (weldless) cavity cells by hydroforming are summarized. An overview of the technique developed at DESY for the fabrication of single cells and multicells of the TESLA cavity shape is given and the major rf results are presented. The forming is performed by expanding a seamless tube with internal water pressure while simultaneously swaging it axially. Prior to the expansion the tube is necked at the iris area and at the ends. Tube radii and axial displacements are computer controlled during the forming process in accordance with resultsmore » of finite element method simulations for necking and expansion using the experimentally obtained strain-stress relationship of tube material. In cooperation with industry different methods of niobium seamless tube production have been explored. The most appropriate and successful method is a combination of spinning or deep drawing with flow forming. Several single-cell niobium cavities of the 1.3 GHz TESLA shape were produced by hydroforming. They reached accelerating gradients Eacc up to 35 MV/m after buffered chemical polishing (BCP) and up to 42 MV/m after electropolishing (EP). More recent work concentrated on fabrication and testing of multicell and nine-cell cavities. Several seamless two- and three-cell units were explored. Accelerating gradients Eacc of 30–35 MV/m were measured after BCP and Eacc up to 40 MV/m were reached after EP. Nine-cell niobium cavities combining three three-cell units were completed at the company E. Zanon. These cavities reached accelerating gradients of Eacc = 30–35 MV/m. One cavity is successfully integrated in an XFEL cryomodule and is used in the operation of the FLASH linear accelerator at DESY. Additionally the fabrication of bimetallic single-cell and multicell NbCu cavities by hydroforming was successfully developed. Several NbCu clad single-cell and double-cell cavities of the TESLA shape have

  2. Non-Gaussian shape discrimination with spectroscopic galaxy surveys

    SciTech Connect

    Byun, Joyce; Bean, Rachel E-mail: rbean@astro.cornell.edu

    2015-03-01

    We consider how galaxy clustering data, from Mpc to Gpc scales, from upcoming large scale structure surveys, such as Euclid and DESI, can provide discriminating information about the bispectrum shape arising from a variety of inflationary scenarios. Through exploring in detail the weighting of shape properties in the calculation of the halo bias and halo mass function we show how they probe a broad range of configurations, beyond those in the squeezed limit, that can help distinguish between shapes with similar large scale bias behaviors. We assess the impact, on constraints for a diverse set of non-Gaussian shapes, of galaxy clustering information in the mildly non-linear regime, and surveys that span multiple redshifts and employ different galactic tracers of the dark matter distribution. Fisher forecasts are presented for a Euclid-like spectroscopic survey of Hα-selected emission line galaxies (ELGs), and a DESI-like survey, of luminous red galaxies (LRGs) and [O-II] doublet-selected ELGs, in combination with Planck-like CMB temperature and polarization data.While ELG samples provide better probes of shapes that are divergent in the squeezed limit, LRG constraints, centered below z<1, yield stronger constraints on shapes with scale-independent large-scale halo biases, such as the equilateral template. The ELG and LRG samples provide complementary degeneracy directions for distinguishing between different shapes. For Hα-selected galaxies, we note that recent revisions of the expected Hα luminosity function reduce the halo bias constraints on the local shape, relative to the CMB. For galaxy clustering constraints to be comparable to those from the CMB, additional information about the Gaussian galaxy bias is needed, such as can be determined from the galaxy clustering bispectrum or probing the halo power spectrum directly through weak lensing. If the Gaussian galaxy bias is constrained to better than a percent level then the LSS and CMB data could provide

  3. Hydroforming of elliptical cavities

    SciTech Connect

    Singer, W.; Singer, X.; Jelezov, I.; Kneisel, Peter

    2015-02-27

    Activities of the past several years in developing the technique of forming seamless (weldless) cavity cells by hydroforming are summarized. An overview of the technique developed at DESY for the fabrication of single cells and multicells of the TESLA cavity shape is given and the major rf results are presented. The forming is performed by expanding a seamless tube with internal water pressure while simultaneously swaging it axially. Prior to the expansion the tube is necked at the iris area and at the ends. Tube radii and axial displacements are computer controlled during the forming process in accordance with results of finite element method simulations for necking and expansion using the experimentally obtained strain-stress relationship of tube material. In cooperation with industry different methods of niobium seamless tube production have been explored. The most appropriate and successful method is a combination of spinning or deep drawing with flow forming. Several single-cell niobium cavities of the 1.3 GHz TESLA shape were produced by hydroforming. They reached accelerating gradients Eacc up to 35 MV/m after buffered chemical polishing (BCP) and up to 42 MV/m after electropolishing (EP). More recent work concentrated on fabrication and testing of multicell and nine-cell cavities. Several seamless two- and three-cell units were explored. Accelerating gradients Eacc of 30–35 MV/m were measured after BCP and Eacc up to 40 MV/m were reached after EP. Nine-cell niobium cavities combining three three-cell units were completed at the company E. Zanon. These cavities reached accelerating gradients of Eacc = 30–35 MV/m. One cavity is successfully integrated in an XFEL cryomodule and is used in the operation of the FLASH linear accelerator at DESY. Additionally the fabrication of bimetallic single-cell and multicell NbCu cavities by hydroforming was successfully developed. Several NbCu clad single-cell and double

  4. Ethanol extracts of chickpeas alter the total lipid content and expression levels of genes related to fatty acid metabolism in mouse 3T3-L1 adipocytes

    PubMed Central

    Shinohara, Shigeo; Gu, Yuanjun; Yang, Ying; Furuta, Yasuo; Tanaka, Masahiko; Yue, Xiaohua; Wang, Weiqing; Kitano, Masaru; Kimura, Hiroshi

    2016-01-01

    Desi-type chickpeas, which have long been used as a natural treatment for diabetes, have been reported to lower visceral adiposity, dyslipidemia and insulin resistance induced by a chronic high-fat diet in rats. In this study, in order to examine the effects of chickpeas of this type in an in vitro system, we used the 3T3-L1 mouse cell line, a subclone of Swiss 3T3 cells, which can differentiate into cells with an adipocyte-like phenotype, and we used ethanol extracts of chickpeas (ECP) instead of chickpeas. Treatment of the 3T3-L1 cells with ECP led to a decrease in the lipid content in the cells. The desaturation index, defined as monounsaturated fatty acids (MUFAs)/saturated fatty acids (SFAs), was also decreased by ECP due to an increase in the cellular content of SFAs and a decrease in the content of MUFAs. The decrease in this index may reflect a decreased reaction from SFA to MUFA, which is essential for fat storage. To confirm this hypothesis, we conducted a western blot analysis, which revealed a reduction in the amount of stearoyl-CoA desaturase 1 (SCD1), a key enzyme catalyzing the reaction from SFA to MUFA. We observed simultaneous inactivations of enzymes participating in lipogenesis, i.e., liver kinase B1 (LKB1), acetyl-CoA carboxylase (ACC) and AMPK, by phosphorylation, which may lead to the suppression of reactions from acetyl-CoA to SFA via malonyl-CoA in lipogenesis. We also investigated whether lipolysis is affected by ECP. The amount of carnitine palmitoyltransferase 1 (CPT1), an enzyme important for the oxidation of fatty acids, was increased by ECP treatment. ECP also led to an increase in uncoupling protein 2 (UCP2), reported as a key protein for the oxidation of fatty acids. All of these results obtained regarding lipogenesis and fatty acid metabolism in our in vitro system are consistent with the results previously shown in rats. We also examined the effects on SCD1 and lipid contents of ethanol extracts of Kabuli-type chickpeas, which are

  5. The Climate-G Portal: a scientific gateway for climate change

    NASA Astrophysics Data System (ADS)

    Fiore, S.; Aloisio, G.; Blower, J. D.; Cofino, A.; Denvil, S.; Fox, P. A.; Petitdidier, M.; Schwichtenberg, H.

    2010-12-01

    Climate-G is a data-oriented research effort conceived in the context of the EGEE Earth Science Cluster and devoted to the Climate Change community. The testbed is an interdisciplinary effort joining expertise in the field of climate change and computational science. The main goal of Climate-G is to allow scientists carrying out geographical and cross-institutional data discovery, access, visualization and sharing of climate data. The involved partners are: Centro Euro-Mediterraneo per i Cambiamenti Climatici (CMCC, Italy), Institut Pierre-Simon Laplace (IPSL/CNRS, France), Fraunhofer Institut für Algorithmen und Wissenschaftliches Rechnen (SCAI, Germany), National Center for Atmospheric Research (NCAR, USA) and Rensselaer Polytechnic Institute (RPI, USA), University of Reading (Reading, UK), University of Cantabria (UC, Spain), and University of Salento (UniSalento, Italy). The main results of this testbed are the distributed data/metadata architecture (exploiting the GRelC service) and the scientific gateway of the testbed (Climate-G Portal). The latter is a central topic of this contribution. Data distribution comes from the need of sharing data among centres without moving it into a central repository. Each partner can contribute with new datasets to the testbed just adding a new data service into the infrastructure and mapping it on a specific metadata server. The metadata management plays a critical role in such a distributed environment, since it enables search and discovery activities, allows describing and cataloguing datasets, makes data effectively accessible and shareable by the scientific community. The novel grid enabled harvesting system will be presented and discussed showing a map-enabled search page providing aggregated metadata information. Climate-G exploits both grid technologies connected with the EGEE project and domain-based tools and services. The general grid services provide a solid basis at an infrastructural level ensuring great

  6. Random walk approach for dispersive transport in pipe networks

    NASA Astrophysics Data System (ADS)

    Sämann, Robert; Graf, Thomas; Neuweiler, Insa

    2016-04-01

    Keywords: particle transport, random walk, pipe, network, HYSTEM-EXTAN, OpenGeoSys After heavy pluvial events in urban areas the available drainage system may be undersized at peak flows (Fuchs, 2013). Consequently, rainwater in the pipe network is likely to spill out through manholes. The presence of hazardous contaminants in the pipe drainage system represents a potential risk to humans especially when the contaminated drainage water reaches the land surface. Real-time forecasting of contaminants in the drainage system needs a quick calculation. Numerical models to predict the fate of contaminants are usually based on finite volume methods. Those are not applicable here because of their volume averaging elements. Thus, a more efficient method is preferable, which is independent from spatial discretization. In the present study, a particle-based method is chosen to calculate transport paths and spatial distribution of contaminants within a pipe network. A random walk method for particles in turbulent flow in partially filled pipes has been developed. Different approaches for in-pipe-mixing and node-mixing with respect to the geometry in a drainage network are shown. A comparison of dispersive behavior and calculation time is given to find the fastest model. The HYSTEM-EXTRAN (itwh, 2002) model is used to provide hydrodynamic conditions in the pipe network according to surface runoff scenarios in order to real-time predict contaminant transport in an urban pipe network system. The newly developed particle-based model will later be coupled to the subsurface flow model OpenGeoSys (Kolditz et al., 2012). References: Fuchs, L. (2013). Gefährdungsanalyse zur Überflutungsvorsorge kommunaler Entwässerungssysteme. Sanierung und Anpassung von Entwässerungssystemen-Alternde Infrastruktur und Klimawandel, Österreichischer Wasser-und Abfallwirtschaftsverband, Wien, ISBN, 978-3. itwh (2002). Modellbeschreibung, Institut für technisch-wissenschaftliche Hydrologie Gmb

  7. Towards an integrated view of benthic and pelagic processes in the southern North Sea (German Bight)

    NASA Astrophysics Data System (ADS)

    Friedrich, Jana; van Beusekom, Justus; Neumann, Andreas; Naderipour, Celine

    2015-04-01

    oxygen uptake rates in the warm, productive season. During the summer season, oxygen uptake is significantly higher on silty or muddy, organic-rich sediments than on fine sands or gravel. Epi- and infauna, however, increase the benthic oxygen uptake and nutrient fluxes apparently irrespective of the grain size of the underlying lithogenic sedimentary particles or the water depth. These first results originate from the projects "NOAH - North Sea: Observation and Assessment of Habitats" and "WiMo - Wissenschaftliche Monitoringkonzepte für die Deutsche Bucht / Scientific monitoring concepts for the German Bight".

  8. The Climate-G testbed: towards a large scale data sharing environment for climate change

    NASA Astrophysics Data System (ADS)

    Aloisio, G.; Fiore, S.; Denvil, S.; Petitdidier, M.; Fox, P.; Schwichtenberg, H.; Blower, J.; Barbera, R.

    2009-04-01

    The Climate-G testbed provides an experimental large scale data environment for climate change addressing challenging data and metadata management issues. The main scope of Climate-G is to allow scientists to carry out geographical and cross-institutional climate data discovery, access, visualization and sharing. Climate-G is a multidisciplinary collaboration involving both climate and computer scientists and it currently involves several partners such as: Centro Euro-Mediterraneo per i Cambiamenti Climatici (CMCC), Institut Pierre-Simon Laplace (IPSL), Fraunhofer Institut für Algorithmen und Wissenschaftliches Rechnen (SCAI), National Center for Atmospheric Research (NCAR), University of Reading, University of Catania and University of Salento. To perform distributed metadata search and discovery, we adopted a CMCC metadata solution (which provides a high level of scalability, transparency, fault tolerance and autonomy) leveraging both on P2P and grid technologies (GRelC Data Access and Integration Service). Moreover, data are available through OPeNDAP/THREDDS services, Live Access Server as well as the OGC compliant Web Map Service and they can be downloaded, visualized, accessed into the proposed environment through the Climate-G Data Distribution Centre (DDC), the web gateway to the Climate-G digital library. The DDC is a data-grid portal allowing users to easily, securely and transparently perform search/discovery, metadata management, data access, data visualization, etc. Godiva2 (integrated into the DDC) displays 2D maps (and animations) and also exports maps for display on the Google Earth virtual globe. Presently, Climate-G publishes (through the DDC) about 2TB of data related to the ENSEMBLES project (also including distributed replicas of data) as well as to the IPCC AR4. The main results of the proposed work are: wide data access/sharing environment for climate change; P2P/grid metadata approach; production-level Climate-G DDC; high quality tools for

  9. [Science and life--the history of Marquis Alfonso Corti].

    PubMed

    Betlejewski, Stanisław

    2008-01-01

    Alfonso Corti was born at Gambarana, near Pavia in 1822. A famous friend of Corti's father, Antonio Scarpa, may have kindled his boyhood interest in anatomy and medicine. As a medical student he enrolled first at the University of Pavia. Corti's favorite study there was microanatomy with Bartolomeo Panizza and Mario Rusconi. In 1845, against paternal wishes, Corti moved to Vienna to complete his medical studies and to work in the anatomical institute of Joseph Hirtl. There he received the degree in medicine in 1847 under the supervision of professor Hyrtl, with a thesis on the bloodstream system of a reptile. He was then appointed by Hyrtl to be his Second Prosector. With the outbreak of the 1848 Revolution he left Vienna, and after brief military service in Italy made visits to eminent scientist in Bern, London and Paris. By the beginning of 1850 Corti had received the invitation of the anatomist Albert Kölliker and had moved to Würzburg, where he made friends with Virchow. At the Kölliker Laboratory he began to work on the mammalian auditory system. A short time Corti spent in Utrecht, where he visited Professors Schroeder van der Kolk and Pieter Harting. In Utrecht Corti learned to use methods to preserve several preparations of the cochlea. From Utrecht he returned to Würzburg to complete his study of at least 200 cochlea's' of man and different animals. His famous paper: "Recherches sur l'organe de l'ouïe des mammiferes" appeared in 1851 in Kölliker's journal "Zeitschrift für wissenschaftliche Zoologie". In the same year, after death of his father, he inherited father's title Marchese de San Stefano Belbo and estate and moved back to Italy. In 1855 Corti married the daughter from a neighboring estate, Maria Bettinzoli. His young wife presented him with a daughter Bianca, and a son Gaspare, but in 1861 she died, leaving him with the responsibility of rearing the children. Unfortunately he was gradually developing arthritis deformans. Corti's last 15

  10. Development and validation of hydroacoustic monitoring concepts for the coastal German Bight (SE North Sea)

    NASA Astrophysics Data System (ADS)

    Mielck, Finn; Hass, H. Christian; Holler, Peter; Bartholomä, Alexander; Neumann, Andreas; Kröncke, Ingrid; Reimers, Hans-Christian; Capperucci, Ruggero

    2016-04-01

    The joint research project WIMO (Wissenschaftliche Monitoringkonzepte für die Deutsche Bucht/Scientific Monitoring Concepts for the German Bight, NE North Sea) aims at providing methods for detection and analysis of seabed habitats using modern remote sensing techniques. Our subproject focuses on hydroacoustic techniques in order to gain information about seafloor environments and sediment dynamics. In a timeframe of four years, several key areas in the German Bight were repeatedly observed using different hydroacoustic gear (i. e. sidescan sonars, single/multibeam echo sounders and sub-bottom profilers). In order to ground-truth the acoustic data, hundreds of grab samples and underwater videos were taken. With these techniques it is possible to distinguish between different seafloor habitats, which range from muddy to sandy seafloors (esp. near the barrier islands) to rugged or vegetated/populated reefs around Helgoland. The conducted monitoring program revealed seasonal changes regarding the abundance of the sand mason worm (Lanice conchilega) and the brittle star (Amphiora filiformis) as well as ongoing sedimentary processes driven by tidal currents and wind/storms. It was also possible to determine relationships between sediment characteristics and benthos in some key areas. An essential part of our project included a comparison between the datasets obtained with different hydroacoustic devices, configurations, and evaluation methods in the same study areas. The investigation reveals that there could be distinct differences in interpreting the data and hence in the determination of prevailing seafloor habitats, especially in very heterogeneous areas and at transition zones between the habitats. Therefore, it is recommended to employ more than one hydroacoustic system (preferably a singlebeam device combined with a wide-swath sonar system) synchronously during a survey in order to gain more reliable and detailed information about the seafloor environments. The

  11. Neutrino Physics from the Cosmic Microwave Background and Large Scale Structure

    DOE PAGES

    Abazajian, K. N.; Arnold, K.; Austermann, J.; ...

    2014-03-15

    This is a report on the status and prospects of the quantification of neutrino properties through the cosmological neutrino background for the Cosmic Frontier of the Division of Particles and Fields Community Summer Study long-term planning exercise. Experiments planned and underway are prepared to study the cosmological neutrino background in detail via its influence on distance-redshift relations and the growth of structure. The program for the next decade described in this document, including upcoming spectroscopic galaxy surveys eBOSS and DESI and a new Stage-IV CMB polarization experiment CMB-S4, will achieve σ (σmv) = 16 meV and σ (Neff)(Neff) = 0.020.more » Such a mass measurement will produce a high significance detection of non-zero σmνσmν, whose lower bound derived from atmospheric and solar neutrino oscillation data is about 58 meV. If neutrinos have a minimal normal mass hierarchy, this measurement will definitively rule out the inverted neutrino mass hierarchy, shedding light on one of the most puzzling aspects of the Standard Model of particle physics — the origin of mass. This precise a measurement of Neff will allow for high sensitivity to any light and dark degrees of freedom produced in the big bang and a precision test of the standard cosmological model prediction that Neff = 3.046.« less

  12. Correction of the deterministic part of space-charge interaction in momentum microscopy of charged particles.

    PubMed

    Schönhense, G; Medjanik, K; Tusche, C; de Loos, M; van der Geer, B; Scholz, M; Hieke, F; Gerken, N; Kirschner, J; Wurth, W

    2015-12-01

    Ultrahigh spectral brightness femtosecond XUV and X-ray sources like free electron lasers (FEL) and table-top high harmonics sources (HHG) offer fascinating experimental possibilities for analysis of transient states and ultrafast electron dynamics. For electron spectroscopy experiments using illumination from such sources, the ultrashort high-charge electron bunches experience strong space-charge interactions. The Coulomb interactions between emitted electrons results in large energy shifts and severe broadening of photoemission signals. We propose a method for a substantial reduction of the effect by exploiting the deterministic nature of space-charge interaction. The interaction of a given electron with the average charge density of all surrounding electrons leads to a rotation of the electron distribution in 6D phase space. Momentum microscopy gives direct access to the three momentum coordinates, opening a path for a correction of an essential part of space-charge interaction. In a first experiment with a time-of-flight momentum microscope using synchrotron radiation at BESSY, the rotation in phase space became directly visible. In a separate experiment conducted at FLASH (DESY), the energy shift and broadening of the photoemission signals were quantified. Finally, simulations of a realistic photoemission experiment including space-charge interaction reveals that a gain of an order of magnitude in resolution is possible using the correction technique presented here.

  13. Trp53 deficient mice predisposed to preterm birth display region-specific lipid alterations at the embryo implantation site

    SciTech Connect

    Lanekoff, Ingela; Cha, Jeeyeon; Kyle, Jennifer E.; Dey, Sudhansu K.; Laskin, Julia; Burnum-Johnson, Kristin E.

    2016-09-13

    Here we demonstrate that conditional deletion of mouse uterine Trp53 (p53d/d), molecularly linked to mTORC1 activation and causally linked to premature uterine senescence and preterm birth, results in aberrant lipid signatures within the heterogeneous cell types of embryo implantation sites on day 8 of pregnancy. In situ nanospray desorption electrospray ionization mass spectrometry imaging (nano-DESI MSI) was used to characterize the molecular speciation of free fatty acids, monoacylglycerols, unmodified and oxidized phosphatidylcholine (PC/Ox-PC), and diacylglycerol (DG) species within implantation sites of p53d/d mice and floxed littermates. Implantation sites from p53d/d mice exhibited distinct spatially resolved changes demonstrating accumulation of DG species, depletion of Ox-PC species, and increase in species with more unsaturated acyl chains, including arachidonic and docosahexaenoic acid. Understanding abnormal changes in the abundance and localization of individual lipid species early in the progression to premature birth is important for discovering novel targets for treatments and diagnosis.

  14. Modeling the Lyα Forest in Collisionless Simulations

    NASA Astrophysics Data System (ADS)

    Sorini, Daniele; Oñorbe, José; Lukić, Zarija; Hennawi, Joseph F.

    2016-08-01

    Cosmological hydrodynamic simulations can accurately predict the properties of the intergalactic medium (IGM), but only under the condition of retaining the high spatial resolution necessary to resolve density fluctuations in the IGM. This resolution constraint prohibits simulating large volumes, such as those probed by BOSS and future surveys, like DESI and 4MOST. To overcome this limitation, we present “Iteratively Matched Statistics” (IMS), a novel method to accurately model the Lyα forest with collisionless N-body simulations, where the relevant density fluctuations are unresolved. We use a small-box, high-resolution hydrodynamic simulation to obtain the probability distribution function (PDF) and the power spectrum of the real-space Lyα forest flux. These two statistics are iteratively mapped onto a pseudo-flux field of an N-body simulation, which we construct from the matter density. We demonstrate that our method can reproduce the PDF, line of sight and 3D power spectra of the Lyα forest with good accuracy (7%, 4%, and 7% respectively). We quantify the performance of the commonly used Gaussian smoothing technique and show that it has significantly lower accuracy (20%-80%), especially for N-body simulations with achievable mean inter-particle separations in large-volume simulations. In addition, we show that IMS produces reasonable and smooth spectra, making it a powerful tool for modeling the IGM in large cosmological volumes and for producing realistic “mock” skies for Lyα forest surveys.

  15. Crystal Monochromator based Emittance Measurements at the PETRA Undulator Beamline

    NASA Astrophysics Data System (ADS)

    Hahn, U.; Schulte-Schrepping, H.

    2004-05-01

    The synchrotron radiation beamline at the PETRA storage ring at DESY with two end stations uses a 4 m-long undulator delivering hard X-ray photons up to 300 keV at a storage ring energy of 12 GeV. The spatial photon intensity distribution at the first undulator harmonic (21.23 keV) was used to determine the horizontal emittance of the storage ring. The set-up installed at 107.7 m from the source point consists of a vacuum chamber with a cryogenically cooled silicon crystal in Laue geometry. The monochromatized radiation is converted to visible light by a fluorescent screen on the back of an aluminum plate and observed by a digital camera. Gaussian fits to horizontal lines through the centre of mass of the images provide the standard deviations of the measured intensity distributions in the horizontal plane. The corresponding emittance values were derived by modeling the whole setup with the SPECTRA code using the emittance as a free parameter and by using machine physics formulas neglecting photon source size effects.

  16. Breaking the pumping speed barrier in mass spectrometry: discontinuous atmospheric pressure interface.

    PubMed

    Gao, Liang; Cooks, R Graham; Ouyang, Zheng

    2008-06-01

    The performance of mass spectrometers with limited pumping capacity is shown to be improved through use of a discontinuous atmospheric pressure interface (DAPI). A proof-of-concept DAPI interface was designed and characterized using a miniature rectilinear ion trap mass spectrometer. The interface consists of a simple capillary directly connecting the atmospheric pressure ion source to the vacuum mass analyzer region; it has no ion optical elements and no differential pumping stages. Gases carrying ionized analytes were pulsed into the mass analyzer for short periods at high flow rates rather than being continuously introduced at lower flow rates; this procedure maximized ion transfer. The use of DAPI provides a simple solution to the problem of coupling an atmospheric pressure ionization source to a miniature instrument with limited pumping capacity. Data were recorded using various atmospheric pressure ionization sources, including electrospray ionization (ESI), nano-ESI, atmospheric pressure chemical ionization (APCI), and desorption electrospray ionization (DESI) sources. The interface was opened briefly for ion introduction during each scan. With the use of the 18 W pumping system of the Mini 10, limits of detection in the low part-per-billion levels were achieved and unit resolution mass spectra were recorded.

  17. News from the proton - recent DIS results from HERA

    SciTech Connect

    Meier, K.

    1997-01-01

    Recent results from the two large general-purpose detectors H1 and ZEUS at HERA (DESY, Hamburg, Germany) are presented. Emphasis is given to the analysis of deep inelastic scattering defined by the observation of the scattered electron or positron in the main calorimeters. Results on purely inclusive cross sections lead to a determination of the charged (quarks) parton distribution F{sub 2}(x, Q{sup 2}). Access to the electrically neutral parton content (gluons) is obtained indirectly by an analysis of the expected scaling violation behavior of F{sub 2} or directly from multijet rates originating from well-defined initial parton configurations. Finally, the recently uncovered subclass of large rapidity gap (LRG) events has been analyzed in terms of F{sub 2}. The result supports the concept of a color neutral object (Pomeron IP) being probed by a hard scattering electron. Evidence for factorization of the Pomeron radiation process as well as for scaling in the inclusive IP structure functions has been found.

  18. Spatial Quantitation of Drugs in tissues using Liquid Extraction Surface Analysis Mass Spectrometry Imaging.

    PubMed

    Swales, John G; Strittmatter, Nicole; Tucker, James W; Clench, Malcolm R; Webborn, Peter J H; Goodwin, Richard J A

    2016-11-24

    Liquid extraction surface analysis mass spectrometry imaging (LESA-MSI) has been shown to be an effective tissue profiling and imaging technique, producing robust and reliable qualitative distribution images of an analyte or analytes in tissue sections. Here, we expand the use of LESA-MSI beyond qualitative analysis to a quantitative analytical technique by employing a mimetic tissue model previously shown to be applicable for MALDI-MSI quantitation. Liver homogenate was used to generate a viable and molecularly relevant control matrix for spiked drug standards which can be frozen, sectioned and subsequently analyzed for the generation of calibration curves to quantify unknown tissue section samples. The effects of extraction solvent composition, tissue thickness and solvent/tissue contact time were explored prior to any quantitative studies in order to optimize the LESA-MSI method across several different chemical entities. The use of a internal standard to normalize regional differences in ionization response across tissue sections was also investigated. Data are presented comparing quantitative results generated by LESA-MSI to LC-MS/MS. Subsequent analysis of adjacent tissue sections using DESI-MSI is also reported.

  19. Seaweed allelopathy against coral: surface distribution of a seaweed secondary metabolite by imaging mass spectrometry.

    PubMed

    Andras, Tiffany D; Alexander, Troy S; Gahlena, Asiri; Parry, R Mitchell; Fernandez, Facundo M; Kubanek, Julia; Wang, May D; Hay, Mark E

    2012-10-01

    Coral reefs are in global decline, with seaweeds increasing as corals decrease. Although seaweeds inhibit coral growth, recruitment, and survivorship, the mechanism of these interactions is poorly understood. Here, we used field experiments to show that contact with four common seaweeds induces bleaching on natural colonies of Porites rus. Controls in contact with inert, plastic mimics of seaweeds did not bleach, suggesting seaweed effects resulted from allelopathy rather than shading, abrasion, or physical contact. Bioassay-guided fractionation of the hydrophobic extract from the red alga Phacelocarpus neurymenioides revealed a previously characterized antibacterial metabolite, neurymenolide A, as the main allelopathic agent. For allelopathy of lipid-soluble metabolites to be effective, the compounds would need to be deployed on algal surfaces where they could transfer to corals on contact. We used desorption electrospray ionization mass spectrometry (DESI-MS) to visualize and quantify neurymenolide A on the surface of P. neurymenioides, and we found the molecule on all surfaces analyzed, with highest concentrations on basal portions of blades.

  20. Stability and Resolution Studies of HOMBPMs for the 1.3 GHz Superconducting Accelerating Cavities at FLASH

    NASA Astrophysics Data System (ADS)

    Shi, L.; Baboi, N.; Jones, R. M.

    HOMBPMs (HOM based Beam Position Monitors) are installed at the FLASH facility at DESY, Hamburg. These are aimed at aligning the beam and monitoring the beam position. Over time, the accuracy of beam position prediction is degraded. This is due to instability issues in the 1.3 GHz and 3.9 GHz superconducting cavities and associated electronics. In this paper, we demonstrate for the first time a measurement technique which is stable and can be relied upon over a period of three months with unprecedented resolution (below 4 μm horizontally and 2 μm vertically). We attribute this improvement in stability to a focused campaign on various signal processing and analysis techniques. These techniques include SVD (Singular Value Decomposition), ANN (Artificial Neural Network) and PLS (Partial Least Square). We found the best resolution and computational power using the latter method, PLS. These techniques are directly applicable to the HOMBPM system at the European XFEL that is currently under construction. However, they are in many ways generic and hence applicable to other measurement methods.