Sample records for diagnostic absorption features

  1. The UV to Near-IR Optical Properties of PAHs: A Semi-Empirical Model

    NASA Technical Reports Server (NTRS)

    Mattioda, A. L.; Allamandola, L. J.; Hudgins, D. M.

    2005-01-01

    Interstellar Polycyclic Aromatic Hydrocarbon (PAH) infrared emission features represent an important and unique diagnostic tool of the chemical and physical conditions throughout the universe. However, one challenge facing the widely accepted PAH emission model has been the detection of infrared features in regions of low UV flux. Utilizing recently published laboratory Near Infrared VIR) PAH ion absorption data measured in our laboratory, we build upon previous models for PAH ion absorption in the UV-Vis to extrapolate a new model which incorporates PAH ion absorption in the NIR. This model provides a basis for comparing the relative energy absorption of PAH ions in the UV-Vis and NIR regions for a wide variety of stellar types. This model demonstrates that the radiation from late-type stars can pump the mid-IR PAH features.

  2. Scramjet Performance Assessment Using Water Absorption Diagnostics (U)

    NASA Technical Reports Server (NTRS)

    Cavolowsky, John A.; Loomis, Mark P.; Deiwert, George

    1995-01-01

    Simultaneous multiple path measurements of temperature and H2O concentration will be presented for the AIMHYE test entries in the NASA Ames 16-Inch Shock Tunnel. Monitoring the progress of high temperature chemical reactions that define scramjet combustor efficiencies is a task uniquely suited to nonintrusive optical diagnostics. One application strategy to overcome the many challenges and limitations of nonintrusive measurements is to use laser absorption spectroscopy coupled with optical fibers. Absorption spectroscopic techniques with rapidly tunable lasers are capable of making simultaneous measurements of mole fraction, temperature, pressure, and velocity. The scramjet water absorption diagnostic was used to measure combustor efficiency and was compared to thrust measurements using a nozzle force balance and integrated nozzle pressures to develop a direct technique for evaluating integrated scramjet performance. Tests were initially performed with a diode laser tuning over a water absorption feature at 1391.7 nm. A second diode laser later became available at a wavelength near 1343.3 nm covering an additional water absorption feature and was incorporated in the system for a two-wavelength technique. Both temperature and mole fraction can be inferred from the lineshape analysis using this approach. Additional high temperature spectroscopy research was conducted to reduce uncertainties in the scramjet application. The lasers are optical fiber coupled to ports at the combustor exit and in the nozzle region. The output from the two diode lasers were combined in a single fiber, and the resultant two-wavelength beam was subsequently split into four legs. Each leg was directed through 60 meters of optical fiber to four combustor exit locations for measurement of beam intensity after absorption by the water within the flow. Absorption results will be compared to 1D combustor analysis using RJPA and nozzle CFD computations as well as to data from a nozzle metric balance measuring thrust and integrated pressure measurements along the length of the nozzle. Assessment of its value as a combustor performance evaluation tool will be conducted.

  3. The origin of blueshifted absorption features in the X-ray spectrum of PG 1211+143: outflow or disc

    NASA Astrophysics Data System (ADS)

    Gallo, L. C.; Fabian, A. C.

    2013-07-01

    In some radio-quiet active galactic nuclei (AGN), high-energy absorption features in the X-ray spectra have been interpreted as ultrafast outflows (UFOs) - highly ionized material (e.g. Fe XXV and Fe XXVI) ejected at mildly relativistic velocities. In some cases, these outflows can carry energy in excess of the binding energy of the host galaxy. Needless to say, these features demand our attention as they are strong signatures of AGN feedback and will influence galaxy evolution. For the same reason, alternative models need to be discussed and refuted or confirmed. Gallo and Fabian proposed that some of these features could arise from resonance absorption of the reflected spectrum in a layer of ionized material located above and corotating with the accretion disc. Therefore, the absorbing medium would be subjected to similar blurring effects as seen in the disc. A priori, the existence of such plasma above the disc is as plausible as a fast wind. In this work, we highlight the ambiguity by demonstrating that the absorption model can describe the ˜7.6 keV absorption feature (and possibly other features) in the quasar PG 1211+143, an AGN that is often described as a classic example of a UFO. In this model, the 2-10 keV spectrum would be largely reflection dominated (as opposed to power law dominated in the wind models) and the resonance absorption would be originating in a layer between about 6 and 60 gravitational radii. The studies of such features constitute a cornerstone for future X-ray observatories like Astro-H and Athena+. Should our model prove correct, or at least important in some cases, then absorption will provide another diagnostic tool with which to probe the inner accretion flow with future missions.

  4. Numerical simulation of infrared radiation absorption for diagnostics of gas-aerosol medium by remote sensing data

    NASA Astrophysics Data System (ADS)

    Voitsekhovskaya, O. K.; Egorov, O. V.; Kashirskii, D. E.; Shefer, O. V.

    2015-11-01

    Calculated absorption spectra of the mixture of gases (H2O, CO, CO2, NO, NO2, and SO2) and aerosol (soot and Al2O3), contained in the exhausts of aircraft and rocket engines are demonstrated. Based on the model of gas-aerosol medium, a numerical study of the spectral dependence of the absorptance for different ratios of gas and aerosol components was carried out. The influence of microphysical and optical properties of the components of the mixture on the spectral features of absorption of gas-aerosol medium was established.

  5. Near-infrared diode laser absorption diagnostic for temperature and water vapor in a scramjet combustor

    NASA Astrophysics Data System (ADS)

    Liu, Jonathan T. C.; Rieker, Gregory B.; Jeffries, Jay B.; Gruber, Mark R.; Carter, Campbell D.; Mathur, Tarun; Hanson, Ronald K.

    2005-11-01

    Tunable diode laser absorption measurements of gas temperature and water concentration were made at the exit of a model scramjet combustor fueled on JP-7. Multiplexed, fiber-coupled, near-infrared distributed feedback lasers were used to probe three water vapor absorption features in the 1.34 1.47 μm spectral region (2v1 and v1+v3 overtone bands). Ratio thermometry was performed using direct-absorption wavelength scans of isolated features at a 4-kHz repetition rate, as well as 2f wavelength modulation scans at a 2-kHz scan rate. Large signal-to-noise ratios demonstrate the ability of the optimally engineered optical hardware to reject beam steering and vibration noise. Successful measurements were made at full combustion conditions for a variety of fuel/air equivalence ratios and at eight vertical positions in the duct to investigate spatial uniformity. The use of three water vapor absorption features allowed for preliminary estimates of temperature distributions along the line of sight. The improved signal quality afforded by 2f measurements, in the case of weak absorption, demonstrates the utility of a scanned wavelength modulation strategy in such situations.

  6. Spectrum recovery method based on sparse representation for segmented multi-Gaussian model

    NASA Astrophysics Data System (ADS)

    Teng, Yidan; Zhang, Ye; Ti, Chunli; Su, Nan

    2016-09-01

    Hyperspectral images can realize crackajack features discriminability for supplying diagnostic characteristics with high spectral resolution. However, various degradations may generate negative influence on the spectral information, including water absorption, bands-continuous noise. On the other hand, the huge data volume and strong redundancy among spectrums produced intense demand on compressing HSIs in spectral dimension, which also leads to the loss of spectral information. The reconstruction of spectral diagnostic characteristics has irreplaceable significance for the subsequent application of HSIs. This paper introduces a spectrum restoration method for HSIs making use of segmented multi-Gaussian model (SMGM) and sparse representation. A SMGM is established to indicating the unsymmetrical spectral absorption and reflection characteristics, meanwhile, its rationality and sparse property are discussed. With the application of compressed sensing (CS) theory, we implement sparse representation to the SMGM. Then, the degraded and compressed HSIs can be reconstructed utilizing the uninjured or key bands. Finally, we take low rank matrix recovery (LRMR) algorithm for post processing to restore the spatial details. The proposed method was tested on the spectral data captured on the ground with artificial water absorption condition and an AVIRIS-HSI data set. The experimental results in terms of qualitative and quantitative assessments demonstrate that the effectiveness on recovering the spectral information from both degradations and loss compression. The spectral diagnostic characteristics and the spatial geometry feature are well preserved.

  7. Diagnostics of oral lichen planus based on analysis of volatile organic compounds in saliva

    NASA Astrophysics Data System (ADS)

    Kistenev, Yury; Borisov, Alexey; Shapovalov, Alexander; Baydik, Olga; Titarenko, Maria

    2017-03-01

    The ability of diagnostics of oral lichen planus (OLP) based on spectral analysis of saliva using the THz spectroscopy is presented. The study included 8 patients with clinically proven OLP. The comparison group consisted of 8 healthy volunteers. Absorption spectra of the saliva was measured using time-domain spectrometer T-spec (EXPLA) in the range 0.2-3THz and have been considered as the feature vectors of the state. The spatial distribution of the objects under study in the feature space was analyzed using principle component analysis. The groups under study were shown to separate in full. Thus, the saliva analysis by the THz spectroscopy technique can be potentially used as a method of noninvasive diagnostics of the OLP.

  8. Nonequilibrium iron oxide formation in some low-mass post-asymptotic giant branch stars

    NASA Technical Reports Server (NTRS)

    Rietmeijer, Frans J. M.

    1992-01-01

    Using experimental evidence that under highly oxidizing conditions gamma-Fe2O3 (maghemite) and Fe3O4 display refractory behavior, it is proposed that very low C/O ratios, that could be unique to evolving AGB stars, induce nonequilibrium formation of ferromagnetic iron oxide grains along with chondritic dust. The oxides are preferentially fractionated from chondritic dust in the stellar magnetic field which could account for the observed extreme iron underabundance in their photosphere. A search for the 1-2.5-micron IR absorption feature, or for diagnostic magnetite and maghemite IR absorption features, could show the validity of the model proposed.

  9. Weathering Grade Classification of Granite Stone Monument Using Reflectance Spectroscopy

    NASA Astrophysics Data System (ADS)

    Hyun, C.; Roh, T.; Choi, M.; Park, H.

    2009-05-01

    Stone monument has been placed in field and exposed to rain and wind. This outdoor environment and air pollution induced weathering of stone monument. Weathering grade classification is necessary to manage and conserve stone monuments. Visual interpretation by geologist and laboratory experiments using specimens fallen off from the monument to avoid damage on the monument have been applied to classify weathering grade conventionally. Rocks and minerals absorb some particular wavelength ranges of electromagnetic energy by electronic process and vibrational process of composing elements and these phenomena produce intrinsic diagnostic spectral reflectance curve. Non-destructive technique for weathering degree assessment measures those diagnostic absorption features of weathering products and converts the depths of features related to abundance of the materials to relative weathering degree. We selected granite outcrop to apply conventional six folded weathering grade classification method using Schmidt hammer rebound teste. The correlations between Schmidt hammer rebound values and absorption depths of iron oxides such as ferric oxide in the vicinity of 0.9 micrometer wavelength and clay minerals such as illite and kaolinite in the vicinity of 2.2 micrometer wavelength, representative weathering products of granite, were analyzed. The Schmidt hammer rebound value decreased according to increase of absorption depths induced from those weathering products. Weathering grade classification on the granite stone monument was conducted by using absorption depths of weathering products This research is supported from National Research Institute of Cultural Heritage and we appreciate for this.

  10. Airborne imaging spectrometer data of the Ruby Mountains, Montana: Mineral discrimination using relative absorption band-depth images

    USGS Publications Warehouse

    Crowley, J.K.; Brickey, D.W.; Rowan, L.C.

    1989-01-01

    Airborne imaging spectrometer data collected in the near-infrared (1.2-2.4 ??m) wavelength range were used to study the spectral expression of metamorphic minerals and rocks in the Ruby Mountains of southwestern Montana. The data were analyzed by using a new data enhancement procedure-the construction of relative absorption band-depth (RBD) images. RBD images, like bandratio images, are designed to detect diagnostic mineral absorption features, while minimizing reflectance variations related to topographic slope and albedo differences. To produce an RBD image, several data channels near an absorption band shoulder are summed and then divided by the sum of several channels located near the band minimum. RBD images are both highly specific and sensitive to the presence of particular mineral absorption features. Further, the technique does not distort or subdue spectral features as sometimes occurs when using other data normalization methods. By using RBD images, a number of rock and soil units were distinguished in the Ruby Mountains including weathered quartz - feldspar pegmatites, marbles of several compositions, and soils developed over poorly exposed mica schists. The RBD technique is especially well suited for detecting weak near-infrared spectral features produced by soils, which may permit improved mapping of subtle lithologic and structural details in semiarid terrains. The observation of soils rich in talc, an important industrial commodity in the study area, also indicates that RBD images may be useful for mineral exploration. ?? 1989.

  11. High enthalpy arc-heated plasma flow diagnostics by tunable diode laser absorption spectroscopy

    NASA Astrophysics Data System (ADS)

    Lin, Xin; Chen, Lianzhong; Zeng, Hui; Ou, Dongbin; Dong, Yonghui

    2017-05-01

    This paper reports the laser absorption measurements of atomic oxygen in the FD04 arc-heater at China Academy of Aerospace Aerodynamics (CAAA). An atomic oxygen absorption line at 777.19 nm is utilizied for detecting the population of electronically excited oxygen atom in an air plasma flow. A scanned-wavelength direct absorption mode is used in this study. The laser is scanned in wavelength across the absorption feature at a rate of 200 Hz. Under the assumption of thermal equilibrium, time-resolved temperature measurements are obtained on one line-of-sight in the arc-heater. The good agreement of the temperature inferred from the sonic throat method suggests the equilibrium assumption is valid. These results illustrate the feasibility of the diode laser sensors for flow parameters in high enthalpy arc-heated facilities.

  12. Diagnostics for Hypersonic Engine Control

    DTIC Science & Technology

    2015-02-01

    modeling efforts and/or lead to the development of sensors that can be used as part of scramjet engine control strategies. Activities included work on...of a model scramjet engine cannot rely on the presence of water. Instead, light sources operating at wavelengths resonant with molecular oxygen are...transmitted beam amplitude fluctuations (scintillation). Frequency axis is normalized. Figure 3. Oxygen absorption feature recorded using direct

  13. HeI lambda 10830 line: a probe of the accretion/ejection activity in RU Lupi .

    NASA Astrophysics Data System (ADS)

    Podio, L.; Garcia, P. J. V.; Bacciotti, F.

    Most of the observed lines and continuum emission excesses from Classical T Tauri Stars (CTTSs) take place at the star-disk interface or in the inner disk region. These regions have a complex emission topology still largely unknown. The HeI lambda 10830 line showed to be a powerful instrument to trace both accreting matter, in emission, and outflowing gas via the frequently detected absorption features. To fully exploit the diagnostic potential of this line we performed a spectro-astrometric analysis of the spectra of the TTS RU Lupi, taken with ISAAC at the VLT. The analysis highlighted a displacement with respect to the source of the region where the absorption feature is generated. This indicates the presence of both an inner stellar wind and a collimated micro-jet in the circumstellar region of RU Lupi.

  14. Distribution of hydrothermally altered rocks in the Reko Diq, Pakistan mineralized area based on spectral analysis of ASTER data

    USGS Publications Warehouse

    Rowan, L.C.; Schmidt, R.G.; Mars, J.C.

    2006-01-01

    The Reko Diq, Pakistan mineralized study area, approximately 10??km in diameter, is underlain by a central zone of hydrothermally altered rocks associated with Cu-Au mineralization. The surrounding country rocks are a variable mixture of unaltered volcanic rocks, fluvial deposits, and eolian quartz sand. Analysis of 15-band Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) data of the study area, aided by laboratory spectral reflectance and spectral emittance measurements of field samples, shows that phyllically altered rocks are laterally extensive, and contain localized areas of argillically altered rocks. In the visible through shortwave-infrared (VNIR + SWIR) phyllically altered rocks are characterized by Al-OH absorption in ASTER band 6 because of molecular vibrations in muscovite, whereas argillically altered rocks have an absorption feature in band 5 resulting from alunite. Propylitically altered rocks form a peripheral zone and are present in scattered exposures within the main altered area. Chlorite and muscovite cause distinctive absorption features at 2.33 and 2.20????m, respectively, although less intense 2.33????m absorption is also present in image spectra of country rocks. Important complementary lithologic information was derived by analysis of the spectral emittance data in the 5 thermal-infrared (TIR) bands. Silicified rocks were not distinguished in the 9 VNIR + SWIR bands because of the lack of diagnostic spectral absorption features in quartz in this wavelength region. Quartz-bearing surficial deposits, as well as hydrothermally silicified rocks, were mapped in the TIR bands by using a band 13/band 12 ratio image, which is sensitive to the intensity of the quartz reststrahlen feature. Improved distinction between the quartzose surficial deposits and silicified bedrock was achieved by using matched-filter processing with TIR image spectra for reference. ?? 2006 Elsevier Inc. All rights reserved.

  15. The influence of rotation on optical emission profiles of O stars

    NASA Astrophysics Data System (ADS)

    Hillier, D. John; Bouret, Jean-Claude; Lanz, Thierry; Busche, Joseph R.

    2012-10-01

    We study the formation of photospheric emission lines in O stars and show that the rectangular profiles, sometimes double peaked, that are observed for some stars are a direct consequence of rotation, and it is unnecessary to invoke an enhanced density structure in the equatorial regions. Emission lines, such as N IV λ4058 and the N III λλ4634-4640-4642 multiplet, exhibit non-standard 'limb-darkening' laws. The lines can be in absorption for rays striking the centre of the star and in emission for rays near the limb. Weak features in the flux spectrum do not necessarily indicate an intrinsically weak feature - instead the feature can be weak because of cancellation between absorption in 'core' rays and emission from rays near the limb. Rotation also modifies line profiles of wind diagnostics such as He II λ4686 and Hα and should not be neglected when inferring the actual stratification, level and nature of wind structures.

  16. X-ray absorption spectroscopy of aluminum z-pinch plasma with tungsten backlighter planar wire array source.

    PubMed

    Osborne, G C; Kantsyrev, V L; Safronova, A S; Esaulov, A A; Weller, M E; Shrestha, I; Shlyaptseva, V V; Ouart, N D

    2012-10-01

    Absorption features from K-shell aluminum z-pinch plasmas have recently been studied on Zebra, the 1.7 MA pulse power generator at the Nevada Terawatt Facility. In particular, tungsten plasma has been used as a semi-backlighter source in the generation of aluminum K-shell absorption spectra by placing a single Al wire at or near the end of a single planar W array. All spectroscopic experimental results were recorded using a time-integrated, spatially resolved convex potassium hydrogen phthalate (KAP) crystal spectrometer. Other diagnostics used to study these plasmas included x-ray detectors, optical imaging, laser shadowgraphy, and time-gated and time-integrated x-ray pinhole imagers. Through comparisons with previous publications, Al K-shell absorption lines are shown to be from much lower electron temperature (∼10-40 eV) plasmas than emission spectra (∼350-500 eV).

  17. Three-dimensional propagation and absorption of high frequency Gaussian beams in magnetoactive plasmas

    NASA Astrophysics Data System (ADS)

    Nowak, S.; Orefice, A.

    1994-05-01

    In today's high frequency systems employed for plasma diagnostics, power heating, and current drive the behavior of the wave beams is appreciably affected by the self-diffraction phenomena due to their narrow collimation. In the present article the three-dimensional propagation of Gaussian beams in inhomogeneous and anisotropic media is analyzed, starting from a properly formulated dispersion relation. Particular attention is paid, in the case of electromagnetic electron cyclotron (EC) waves, to the toroidal geometry characterizing tokamak plasmas, to the power density evolution on the advancing wave fronts, and to the absorption features occurring when a beam crosses an EC resonant layer.

  18. Surface materials map of Afghanistan: carbonates, phyllosilicates, sulfates, altered minerals, and other materials

    USGS Publications Warehouse

    Kokaly, Raymond F.; King, Trude V.V.; Hoefen, Todd M.; Dudek, Kathleen B.; Livo, Keith E.

    2012-01-01

    This map shows the distribution of selected carbonates, phyllosilicates, sulfates, altered minerals, and other materials derived from analysis of HyMap imaging spectrometer data of Afghanistan. Using a NASA (National Aeronautics and Space Administration) WB-57 aircraft flown at an altitude of ~15,240 meters or ~50,000 feet, 218 flight lines of data were collected over Afghanistan between August 22 and October 2, 2007. The HyMap data were converted to apparent surface reflectance, then further empirically adjusted using ground-based reflectance measurements. The reflectance spectrum of each pixel of HyMap data was compared to the spectral features of reference entries in a spectral library of minerals, vegetation, water, ice, and snow. This map shows the spatial distribution of minerals that have diagnostic absorption features in the shortwave infrared wavelengths. These absorption features result primarily from characteristic chemical bonds and mineralogical vibrations. Several criteria, including (1) the reliability of detection and discrimination of minerals using the HyMap spectrometer data, (2) the relative abundance of minerals, and (3) the importance of particular minerals to studies of Afghanistan's natural resources, guided the selection of entries in the reference spectral library and, therefore, guided the selection of mineral classes shown on this map. Minerals occurring abundantly at the surface and those having unique spectral features were easily detected and discriminated. Minerals having similar spectral features were less easily discriminated, especially where the minerals were not particularly abundant and (or) where vegetation cover reduced the absorption strength of mineral features. Complications in reflectance calibration also affected the detection and identification of minerals.

  19. Analysis of Shuttle Multispecral Infrared Radiometer measurements of the western Saudi Arabian shield.

    USGS Publications Warehouse

    Rowan, Lawrence C.; Goetz, Alexander F.H.; Abbott, Elsa

    1987-01-01

    During the November 12–14, 1981, mission of the space shuttle Columbia, the Shuttle Multispectral Infrared Radiometer (SMIRR) recorded radiances in ten channels along a 100 m wide groundtrack across the western Saudi Arabian shield. The ten channels are located in the 0.5 to 2.4 μm region, with five positioned between 2.0 and 2.40 μm for measuring absorption features that are diagnostic of OH‐bearing and CO3‐bearing">CO3‐bearing minerals. This exceptionally well exposed area consists of late Proterozoic metamorphic, intermediate to silicic intrusive, and interlayered clastic sedimentary and intermediate silicic volcanic rocks that have not been studied previously using SMIRR data. Plots or traces of unnormalized SMIRR channel ratios were examined before field studies to locate areas with high spectral contrast, especially in the 2.0 μm to 2.40 μm channels. Reflectance spectra were measured in the laboratory for rock and soil samples collected in these areas, and the mineralogic causes of the main absorption features were determined using X‐ray diffraction. Laboratory SMIRR spectra were produced by convolving the ten SMIRR filters with the laboratory spectra. Then, normalized SMIRR reflectance spectra were generated along the groundtrack using normalization coefficients calculated for a field sample representing a uniform, low‐spectral contrast area. Field evaluation shows that unnormalized SMIRR ratio traces are useful, even without specific mineralogic information, for distinguishing rocks that are characterized by Al‐OH, Mg‐OH, and/or CO3">CO3">CO3, Fe3+">Fe3+, and Fe2+ absorption features. Analysis of field samples permits suites of minerals causing absorption features to be identified. However, specific mineral identification cannot be achieved consistently using the SMIRR ratio traces or normalized SMIRR spectra, because the Al‐OH and Mg‐OH absorption features can be caused by more than one of the minerals commonly present. The normalized SMIRR spectra are especially useful for identifying subtle Al‐OH and Mg‐OH absorption features that are difficult to identify in the unnormalized ratio traces and for comparing the relative intensities of absorption features. Al‐OH absorption is related to muscovite, smectite, illite, and kaolinite, whereas Mg‐OH absorption is caused by chlorite, amphibole, and biotite. The principal sources of error in using SMIRR spectral measurements for identifying mineral groups along the orbit 27 groundtrack are inaccuracies in field location and lithologic heterogeneity that is not represented adequately by field samples. Calibration errors may account for systematic albedo and absorption intensity differences between calculated laboratory SMIRR spectra and normalized SMIRR spectra. SMIRR instrument noise and atmospheric factors appear to be less important sources of error. However, as higher spectral and spatial resolution systems are developed for mineral identification, radiometric precision and atmospheric factors will become more important.

  20. Cell classification using big data analytics plus time stretch imaging (Conference Presentation)

    NASA Astrophysics Data System (ADS)

    Jalali, Bahram; Chen, Claire L.; Mahjoubfar, Ata

    2016-09-01

    We show that blood cells can be classified with high accuracy and high throughput by combining machine learning with time stretch quantitative phase imaging. Our diagnostic system captures quantitative phase images in a flow microscope at millions of frames per second and extracts multiple biophysical features from individual cells including morphological characteristics, light absorption and scattering parameters, and protein concentration. These parameters form a hyperdimensional feature space in which supervised learning and cell classification is performed. We show binary classification of T-cells against colon cancer cells, as well classification of algae cell strains with high and low lipid content. The label-free screening averts the negative impact of staining reagents on cellular viability or cell signaling. The combination of time stretch machine vision and learning offers unprecedented cell analysis capabilities for cancer diagnostics, drug development and liquid biopsy for personalized genomics.

  1. Spectral reflectance properties (0.4-2.5 μm) of secondary Fe-oxide, Fe-hydroxide, and Fe-sulphate-hydrate minerals associated with sulphide-bearing mine wastes

    USGS Publications Warehouse

    Crowley, J.K.; Williams, D.E.; Hammarstrom, J.M.; Piatak, N.; Chou, I.-Ming; Mars, J.C.

    2003-01-01

    Diffuse reflectance spectra of 15 mineral species commonly associated with sulphide-bearing mine wastes show diagnostic absorption bands related to electronic processes involving ferric and/or ferrous iron, and to vibrational processes involving water and hydroxyl. Many of these absorption bands are relatively broad and overlapping; however, spectral analysis methods, including continuum removal and derivative analysis, permit most of the minerals to be distinguished. Key spectral differences between the minerals are illustrated in a series of plots showing major absorption band centres and other spectral feature positions. Because secondary iron minerals are sensitive indicators of pH, Eh, relative humidity, and other environmental conditions, spectral mapping of mineral distributions promises to have important application to mine waste remediation studies.

  2. Detecting bacterial magnetite in sediments: strengths and limitations of FMR spectroscopy

    NASA Astrophysics Data System (ADS)

    Winklhofer, M.

    2012-04-01

    Ferromagnetic resonance spectroscopy (FMR) is increasingly being used as a diagnostic tool for identifying bacterial magnetite in sediments [e.g., Kopp et al. 2007; Kind et al. 2011, Roberts et al. 2011 ], the reason being that magnetic bacteria have a characteristic FMR fingerprint which is not known from inorganic geological samples [Kopp & Kirschvink, 2008]. The diagnostic FMR features of single-stranded magnetite chains are a g-value < 2 and a markedly asymmetric FMR absorption spectrum, which produces several low-field peaks and a deep high-field minimum in the first-derivative spectrum. These key features can be reproduced not only with a chain-of-spheroids model, but - somewhat astonishingly - also with a single-particle model (Stoner-Wohlfarth-type), provided the easy cubic axis ( ) coincides with the long particle axis [Charilaou et al. 2011]. This agreement weakens the diagnostic strength of the FMR screen, which would render false positive results for the admittedly exotic case of an assemblage of elongated magnetite particles of inorganic origin. Likewise, it will render false negatives by not recognizing bacterial magnetite in other than single-stranded configurations. For example, the FMR absorption spectrum of two-stranded magnetosome chains, which represent the preferred chain arrangement in a number of uncultured but otherwise widespread coccoid bacteria, lacks asymmetry and has a g-value > 2, quite opposite to what we know from single-stranded chains. Therefore, in order to better understand possible biogenic FMR fingerprints and to refine the screen, there is a clear need to acquire FMR spectra of magnetic bacteria with different chain configurations and, in particular, of greigite producing bacteria.

  3. Spectroscopic remote sensing for material identification, vegetation characterization, and mapping

    USGS Publications Warehouse

    Kokaly, Raymond F.; Lewis, Paul E.; Shen, Sylvia S.

    2012-01-01

    Identifying materials by measuring and analyzing their reflectance spectra has been an important procedure in analytical chemistry for decades. Airborne and space-based imaging spectrometers allow materials to be mapped across the landscape. With many existing airborne sensors and new satellite-borne sensors planned for the future, robust methods are needed to fully exploit the information content of hyperspectral remote sensing data. A method of identifying and mapping materials using spectral feature analyses of reflectance data in an expert-system framework called MICA (Material Identification and Characterization Algorithm) is described. MICA is a module of the PRISM (Processing Routines in IDL for Spectroscopic Measurements) software, available to the public from the U.S. Geological Survey (USGS) at http://pubs.usgs.gov/of/2011/1155/. The core concepts of MICA include continuum removal and linear regression to compare key diagnostic absorption features in reference laboratory/field spectra and the spectra being analyzed. The reference spectra, diagnostic features, and threshold constraints are defined within a user-developed MICA command file (MCF). Building on several decades of experience in mineral mapping, a broadly-applicable MCF was developed to detect a set of minerals frequently occurring on the Earth's surface and applied to map minerals in the country-wide coverage of the 2007 Afghanistan HyMap data set. MICA has also been applied to detect sub-pixel oil contamination in marshes impacted by the Deepwater Horizon incident by discriminating the C-H absorption features in oil residues from background vegetation. These two recent examples demonstrate the utility of a spectroscopic approach to remote sensing for identifying and mapping the distributions of materials in imaging spectrometer data.

  4. Mapping minerals, amorphous materials, environmental materials, vegetation, water, ice and snow, and other materials: The USGS tricorder algorithm

    NASA Technical Reports Server (NTRS)

    Clark, Roger N.; Swayze, Gregg A.

    1995-01-01

    One of the challenges of Imaging Spectroscopy is the identification, mapping and abundance determination of materials, whether mineral, vegetable, or liquid, given enough spectral range, spectral resolution, signal to noise, and spatial resolution. Many materials show diagnostic absorption features in the visual and near infrared region (0.4 to 2.5 micrometers) of the spectrum. This region is covered by the modern imaging spectrometers such as AVIRIS. The challenge is to identify the materials from absorption bands in their spectra, and determine what specific analyses must be done to derive particular parameters of interest, ranging from simply identifying its presence to deriving its abundance, or determining specific chemistry of the material. Recently, a new analysis algorithm was developed that uses a digital spectral library of known materials and a fast, modified-least-squares method of determining if a single spectral feature for a given material is present. Clark et al. made another advance in the mapping algorithm: simultaneously mapping multiple minerals using multiple spectral features. This was done by a modified-least-squares fit of spectral features, from data in a digital spectral library, to corresponding spectral features in the image data. This version has now been superseded by a more comprehensive spectral analysis system called Tricorder.

  5. Development of a two-wavelength IR laser absorption diagnostic for propene and ethylene

    NASA Astrophysics Data System (ADS)

    Parise, T. C.; Davidson, D. F.; Hanson, R. K.

    2018-05-01

    A two-wavelength infrared laser absorption diagnostic for non-intrusive, simultaneous quantitative measurement of propene and ethylene was developed. To this end, measurements of absorption cross sections of propene and potential interfering species at 10.958 µm were acquired at high-temperatures. When used in conjunction with existing absorption cross-section measurements of ethylene and other species at 10.532 µm, a two-wavelength diagnostic was developed to simultaneously measure propene and ethylene, the two small alkenes found to generally dominate the final decomposition products of many fuel hydrocarbon pyrolysis systems. Measurements of these two species is demonstrated using this two-wavelength diagnostic scheme for propene decomposition between 1360 and 1710 K.

  6. A Developed Spectral Identification Tree for Mineral Mapping using Hyperspectral Data

    NASA Astrophysics Data System (ADS)

    Gan, Fuping; Wang, Runsheng; Yan, Bokun; Shang, Kun

    2016-04-01

    The relationship between the spectral features and the composition of minerals are the basis of mineral identification using hyperspectral data. The reflectance spectrum of minerals results from the systematic combination of several modes of interaction between electromagnetic energy and mineral particles in the form of reflection and absorption. Minerals tend to have absorbing features at specific wavelengths with a characteristic shape, which can be used as diagnostic indicators for identification. The spectral identification tree (SIT) method for mineral identification is developed in our research to map minerals accurately and applied in some typical mineral deposits in China. The SIT method is based on the diagnostic absorption features of minerals through comparing and statistically analyzing characteristic spectral data of minerals. We establish several levels of identification rules for the type, group and species of minerals using IF-THEN rule according to the spectral identification criteria so that the developed SIT can be further used to map minerals at different levels of detail from mineral type to mineral species. Identifiable minerals can be grouped into six types: Fe2+-bearing, Fe3+-bearing, Mn2+-bearing, Al-OH-bearing, Mg-OH-bearing and carbonate minerals. Each type can be further divided into several mineral groups. Each group contains several mineral species or specific minerals. A mineral spectral series, therefore, can be constructed as "type-group-species-specific mineral (mineral variety)" for mineral spectral identification. It is noted that the mineral classification is based mainly on spectral reflectance characteristics of minerals which may not be consistent with the classification in mineralogy. We applied the developed SIT method to the datasets acquired at the Eastern Tianshan Mountains of Xinjiang (HyMap data) and the Qulong district of Xizang (Hyperion data). In Xinjiang, the two major classes of Al-OH and Mg-OH minerals were mapped firstly. Then montmorillonite, kaolinite and muscovite were identified in the area of the Al-OH bearing minerals, and chlorite and epidote were identified in the area of the Mg-OH bearing minerals. Muscovite of rich Al and poor Al were further identified in the area of muscovite. In Xizang, Al-rich and Al-poor muscovite, kaolinite, chlorite and malachite were identified using SIT method. In all, the developed SIT method can further reduce the effect of other materials and focus on targeted minerals. In particular, the discrimination accuracy will be improved when the most diagnostic absorption spectral features are used in the developed SIT method.

  7. On the temperature and the interstellar nature of coronal gas observed by Copernicus

    NASA Technical Reports Server (NTRS)

    York, D. G.

    1977-01-01

    More detailed scans of ions expected in interstellar absorption at temperatures of 100,000 to 1 million K have been made with Copernicus in five stars: Alpha Vir, Beta Cen, Lambda Sco, Mu Col, and HD 28497. Preliminary data show that the absorption due to O VI is stationary compared with the velocities of stellar absorption in the spectrum of the spectroscopic binary Lambda Sco, thus demonstrating its nonstellar nature. Ionization temperatures interpreted using steady-state or time-dependent assumptions yield values of 280,000 to 700,000 K. There is some evidence that a range of temperatures consistent with this spread may in fact exist in Alpha Vir. For this limited sample of data, there is no clear evidence for a generic association of low-column-density H2 and the O VI absorption. It is concluded that the O VI absorption refers to regions with temperatures exceeding 250,000 K. The only UV diagnostic for the gas appears to be the O VI features, though C IV may be useful in some cases.

  8. The Magellan Evolution of Galaxies Spectroscopic and Ultraviolet Reference Atlas (MegaSaura). II. Stacked Spectra

    NASA Astrophysics Data System (ADS)

    Rigby, J. R.; Bayliss, M. B.; Chisholm, J.; Bordoloi, R.; Sharon, K.; Gladders, M. D.; Johnson, T.; Paterno-Mahler, R.; Wuyts, E.; Dahle, H.; Acharyya, A.

    2018-01-01

    We stack the rest-frame ultraviolet spectra of N = 14 highly magnified gravitationally lensed galaxies at redshifts 1.6< z< 3.6. The resulting new composite spans 900< {λ }{rest}< 3000 Å, with a peak signal-to-noise ratio (S/N) of 103 per spectral resolution element (∼100 km s‑1). It is the highest S/N, highest spectral resolution composite spectrum of z ∼ 2–3 galaxies yet published. The composite reveals numerous weak nebular emission lines and stellar photospheric absorption lines that can serve as new physical diagnostics, particularly at high redshift with the James Webb Space Telescope (JWST). We report equivalent widths to aid in proposing for and interpreting JWST spectra. We examine the velocity profiles of strong absorption features in the composite, and in a matched composite of z∼ 0 COS/HST galaxy spectra. We find remarkable similarity in the velocity profiles at z∼ 0 and z∼ 2, suggesting that similar physical processes control the outflows across cosmic time. While the maximum outflow velocity depends strongly on ionization potential, the absorption-weighted mean velocity does not. As such, the bulk of the high-ionization absorption traces the low-ionization gas, with an additional blueshifted absorption tail extending to at least ‑2000 km s‑1. We interpret this tail as arising from the stellar wind and photospheres of massive stars. Starburst99 models are able to replicate this high-velocity absorption tail. However, these theoretical models poorly reproduce several of the photospheric absorption features, indicating that improvements are needed to match observational constraints on the massive stellar content of star-forming galaxies at z∼ 2. We publicly release our composite spectra.

  9. Hydrothermally-altered dacite terrains in the Methana peninsula Greece: Relevance to Mars

    NASA Astrophysics Data System (ADS)

    Cloutis, Edward A.; Jonatanson, Victoria; Bandfield, Joshua L.; Amador, Elena S.; Rivera-Hernández, Frances; Mann, P.; Mertzman, Stanley A.

    2017-04-01

    Dacitic rocks, often indicative of crustal recycling on Earth, have been identified in some regions on Mars, as have possible hydrothermally/aqueously-altered dacites. To enable more robust identification of unaltered and altered dacites on Mars and other planetary bodies, we undertook a spectroscopic-structural-compositional study of altered and unaltered dacites from a dacitic volcanic region in Methana, Greece. Dacites erupted in this region range from fresh to pervasively hydrothermally altered, resulting in friable, Si-enriched products, as well as fumarolic deposition of Si and S-rich precipitates. Spectrally, fresh dacites are unremarkable in the 0.35-2.5 μm region with low, generally flat, reflectance and few, if any, absorption bands. Dacite infrared spectra exhibit Si-O absorption features in the 8-10 μm region (which are characteristic of Si-bearing rocks, in general). With increasing alteration, reflectance over the 0.35-2.5 μm range increases, absorption bands in the 1.4 and 1.9 μm region, associated with H2O/OH, and in the 2.2-2.3 μm region, associated with SiOH, become deeper, Fe3+-associated absorption bands in the 0.43 and 0.9 μm region appear, and the Christiansen feature near 8 μm moves to shorter wavelengths. Silica-rich coatings appear to be spectrally indistinguishable from Si-rich alteration. Alteration-formed sulfates may be detectable by the presence of diagnostic absorption features in the 0.35-2.5 μm region. Spectral similarities between different poorly crystalline high-Si phases make it difficult to uniquely determine the processes that formed high-Si surfaces that have been identified on Mars. However, the samples described here show a variety of spectral features that correspond to variable amounts of alteration. We find a similar range of spectral features, likely due to similar phases, on Mars, perhaps indicating a similar range of alteration environments. Comparison of laboratory spectra to Mars observational data also suggests that the major Si-rich regions likely consist of assemblages that more mineralogically complex than those included in this study.

  10. Modelling ultraviolet-line diagnostics of stars, the ionized and the neutral interstellar medium in star-forming galaxies

    NASA Astrophysics Data System (ADS)

    Vidal-García, A.; Charlot, S.; Bruzual, G.; Hubeny, I.

    2017-09-01

    We combine state-of-the-art models for the production of stellar radiation and its transfer through the interstellar medium (ISM) to investigate ultraviolet-line diagnostics of stars, the ionized and the neutral ISM in star-forming galaxies. We start by assessing the reliability of our stellar population synthesis modelling by fitting absorption-line indices in the ISM-free ultraviolet spectra of 10 Large Magellanic Cloud clusters. In doing so, we find that neglecting stochastic sampling of the stellar initial mass function in these young (∼10-100 Myr), low-mass clusters affects negligibly ultraviolet-based age and metallicity estimates but can lead to significant overestimates of stellar mass. Then, we proceed and develop a simple approach, based on an idealized description of the main features of the ISM, to compute in a physically consistent way the combined influence of nebular emission and interstellar absorption on ultraviolet spectra of star-forming galaxies. Our model accounts for the transfer of radiation through the ionized interiors and outer neutral envelopes of short-lived stellar birth clouds, as well as for radiative transfer through a diffuse intercloud medium. We use this approach to explore the entangled signatures of stars, the ionized and the neutral ISM in ultraviolet spectra of star-forming galaxies. We find that, aside from a few notable exceptions, most standard ultraviolet indices defined in the spectra of ISM-free stellar populations are prone to significant contamination by the ISM, which increases with metallicity. We also identify several nebular-emission and interstellar-absorption features, which stand out as particularly clean tracers of the different phases of the ISM.

  11. Near-infrared spectroscopy of primitive solar system objects

    NASA Technical Reports Server (NTRS)

    Luu, Jane; Jewitt, David; Cloutis, Edward

    1994-01-01

    We have obtained near-infrared (H and K band at lambda/Delta(lambda) is approximately 480 to 600) spectra of a sample of primitive objects including 2 Centaur objects (2060 Chiron and 5145 Pholus) and 16 P- and D-type asteroids. The spectra were obtained at the United Kingdom Infrared Telescope using the cooled grating spectrometer CGS4, and were used to search for chemically diagnostic vibrational features in these primitive objects. Pholus exhibits broad adsorption features at 2.07 and 2.27 micrometers, as well as a weak feature at 1.72 micrometers. The 1.72- and 2.27-micrometer features are similar to those seen in a laboratory tar sand sample. No distinct absorption features are found in other objects, including Chiron, which displays a spectrally neutral continuum. A comparison of the P- and D-type asteroid spectra with laboratory measurements of organic solids shows no compelling evidence for hydrocarbon overtones seen in terrestrial bituminous tar sands.

  12. New Results on Hydration in M-Type Asteroids

    NASA Astrophysics Data System (ADS)

    Landsman, Zoe A.; Campins, Humberto; Pinilla-Alonso, Noemí; Emery, Joshua P.; Lorenzi, Vania

    2014-11-01

    The M-type asteroids are a taxonomic group considered to be a candidate source of iron meteorites due to spectral and albedo similarities; however, because the spectra of M-type asteroids lack strong diagnostic absorption features in the near-infrared (NIR), their composition is difficult to constrain. High-resolution NIR spectroscopy and radar studies have shown that a metallic interpretation is unlikely to be valid for the majority of M-types. Many show weak absorption features attributed to mafic silicates (Hardersen et al. 2005, 2011; Ockert-Bell et al. 2010; Fornasier et al. 2010). Radar results show evidence for elevated metal content on the surfaces of most M-type asteroids, but few are likely to be entirely metal (Shepard et al. 2010). Surprisingly, spectrophotometric studies in the 3-μm region have indicated that hydrated minerals are relatively common among the M-type population, confounding interpretations of M-types as highly thermally processed (Rivkin et al. 1995, 2000). The shape of the 3-μm band, diagnostic of hydrated and hydroxylated minerals, is relevant to an asteroid’s thermal history (Rivkin et al. 2002, Takir & Emery 2012). To characterize this region, we have conducted a 2 - 4 μm spectroscopic study of six M-type asteroids using SpeX at NASA’s Infrared Telescope Facility. In its LXD mode, SpeX allows us to investigate the 3-μm band at spectral resolutions unavailable during previously published studies. We report the presence of a 3-μm feature on all six asteroids, indicating hydrated minerals on the asteroids’ surfaces. We have also detected rotational variability of the 3-μm feature in asteroid (216) Kleopatra, which, interestingly, had been interpreted as “dry” in previous work (Rivkin et al. 2000). On all of our target asteroids, the 3-μm band depths are < 10%, and there is apparent variation in the shape of the feature among them. We discuss the impact of our results on interpretations of M-type asteroid composition.

  13. Surface materials map of Afghanistan: iron-bearing minerals and other materials

    USGS Publications Warehouse

    King, Trude V.V.; Kokaly, Raymond F.; Hoefen, Todd M.; Dudek, Kathleen B.; Livo, Keith E.

    2012-01-01

    This map shows the distribution of selected iron-bearing minerals and other materials derived from analysis of HyMap imaging spectrometer data of Afghanistan. Using a NASA (National Aeronautics and Space Administration) WB-57 aircraft flown at an altitude of ~15,240 meters or ~50,000 feet, 218 flight lines of data were collected over Afghanistan between August 22 and October 2, 2007. The HyMap data were converted to apparent surface reflectance, then further empirically adjusted using ground-based reflectance measurements. The reflectance spectrum of each pixel of HyMap data was compared to the spectral features of reference entries in a spectral library of minerals, vegetation, water, ice, and snow. This map shows the spatial distribution of iron-bearing minerals and other materials having diagnostic absorptions at visible and near-infrared wavelengths. These absorptions result from electronic processes in the minerals. Several criteria, including (1) the reliability of detection and discrimination of minerals using the HyMap spectrometer data, (2) the relative abundance of minerals, and (3) the importance of particular minerals to studies of Afghanistan's natural resources, guided the selection of entries in the reference spectral library and, therefore, guided the selection of mineral classes shown on this map. Minerals occurring abundantly at the surface and those having unique spectral features were easily detected and discriminated. Minerals having similar spectral features were less easily discriminated, especially where the minerals were not particularly abundant and (or) where vegetation cover reduced the absorption strength of mineral features. Complications in reflectance calibration also affected the detection and identification of minerals.

  14. Water in primitive solar system bodies

    NASA Astrophysics Data System (ADS)

    Yang, Bin

    This is a dissertation on the physical properties, particularly, the water distribution in three small body populations of the solar system: (1) the Jovian Trojans, (2) the main-belt B-type asteroids and (3) the comets. Using near-infrared (NIR) spectroscopy, I have sought diagnostic (especially water) features in the Trojans. My sample is focused on objects identified in previous measurements as being of special interest. I found that the high albedo Trojan (4709) Ennomos has a featureless spectrum and that its surface contains no more than 10% water ice. In addition, the organic-like features reported earlier for Trojans (617) Patroclus, (911) Agamemnon, (1143) Odysseus and (2797) Teucer were not confirmed. Furthermore, my observations of seven Trojan asteroids that have been formerly reported to show silicate-like absorption features did not confirm the features in their spectra. My broadband photometric observations of two Trojan families (the Eurybates and the 1986WD family) showed that five Eurybates Trojans and one 1986WD Trojan exhibit UV drop-offs, indicating the presence of hydrated minerals on these objects. B-type asteroids are rare, blue asteroids, of which 2 Pallas is the largest and most famous example. In a focused, spectroscopic study of 20 B-type asteroids, I found that optically similar B-type asteroids are spectrally diverse in the near infrared. The negative optical spectral slope is due to the presence of a broad absorption band centered near 1.0 mm, which can often be modeled using magnetite. The best meteorite analogs for B-types are the unusual CI and CM carbonaceous chondrites. In the NIR spectra of the outburst comet 17P/Holmes, I found two broad absorption bands with centers (at 2mm and 3mm, respectively) and overall shapes consistent with the presence of micron-sized water ice grains in the coma. These features together with the discovery of excess 3mm thermal emission, suggests that the coma of 17P/Holmes has two components (hot, refractory dust and cold ice grains) which are not in thermal contact. I also detected the 1.5- and 2-mm water ice absorption features in the two bright Oort cloud comets, C/ 2005L3 and C/2006W3.

  15. Multi-spectral fiber spectroscopy in 0,4-16μm range for biomedical applications(Conference Presentation)

    NASA Astrophysics Data System (ADS)

    Artyushenko, Viacheslav

    2017-02-01

    Various biomedical applications of fiber optics in a broad spectral range 0,4-16μm span from endoscopic imaging and Photo Dynamic Diagnostics (PDD) to laser power delivery for minimal invasive laser surgery, tissue coagulation and welding, Photo Dynamic Therapy (PDT), etc. Present review will highlight the latest results in advanced fiber solutions for a precise tissue diagnostics and control of some therapy methods - for so called "theranostic". Spectral fiber sensing for label free analysis of tissue composition helps to differentiate malignant and normal tissue to secure minimal invasive, but complete tumor removal or treatment. All key methods of Raman, fluorescence, diffuse reflection & MIR-absorption spectroscopy will be compared when used for the same spot of tissue - to select the most specific, sensitive and accurate method or to combine them for the synergy enhanced effect. The most informative spectral features for distinct organs/ tumor can be used to design special fiber sensors to be developed for portable and low cost applications with modern IT-features. Examples of multi-spectral tissue diagnostics promising for the future clinical applications will be presented to enable reduced mortality from cancer in the future. Translation of described methods into clinical practice will be discussed in comparison with the other method of optical diagnostics which should enhance modern medicine by less invasive, more precise and more effective methods of therapy to be fused with in-vivo diagnostics sensors & systems.

  16. Clinical skin imaging using color spatial frequency domain imaging (Conference Presentation)

    NASA Astrophysics Data System (ADS)

    Yang, Bin; Lesicko, John; Moy, Austin J.; Reichenberg, Jason; Tunnell, James W.

    2016-02-01

    Skin diseases are typically associated with underlying biochemical and structural changes compared with normal tissues, which alter the optical properties of the skin lesions, such as tissue absorption and scattering. Although widely used in dermatology clinics, conventional dermatoscopes don't have the ability to selectively image tissue absorption and scattering, which may limit its diagnostic power. Here we report a novel clinical skin imaging technique called color spatial frequency domain imaging (cSFDI) which enhances contrast by rendering color spatial frequency domain (SFD) image at high spatial frequency. Moreover, by tuning spatial frequency, we can obtain both absorption weighted and scattering weighted images. We developed a handheld imaging system specifically for clinical skin imaging. The flexible configuration of the system allows for better access to skin lesions in hard-to-reach regions. A total of 48 lesions from 31 patients were imaged under 470nm, 530nm and 655nm illumination at a spatial frequency of 0.6mm^(-1). The SFD reflectance images at 470nm, 530nm and 655nm were assigned to blue (B), green (G) and red (R) channels to render a color SFD image. Our results indicated that color SFD images at f=0.6mm-1 revealed properties that were not seen in standard color images. Structural features were enhanced and absorption features were reduced, which helped to identify the sources of the contrast. This imaging technique provides additional insights into skin lesions and may better assist clinical diagnosis.

  17. Submillimeter Spectroscopic Study of Semiconductor Processing Plasmas

    NASA Astrophysics Data System (ADS)

    Helal, Yaser H.

    Plasmas used for manufacturing processes of semiconductor devices are complex and challenging to characterize. The development and improvement of plasma processes and models rely on feedback from experimental measurements. Current diagnostic methods are not capable of measuring absolute densities of plasma species with high resolution without altering the plasma, or without input from other measurements. At pressures below 100 mTorr, spectroscopic measurements of rotational transitions in the submillimeter/terahertz (SMM) spectral region are narrow enough in relation to the sparsity of spectral lines that absolute specificity of measurement is possible. The frequency resolution of SMM sources is such that spectral absorption features can be fully resolved. Processing plasmas are a similar pressure and temperature to the environment used to study astrophysical species in the SMM spectral region. Many of the molecular neutrals, radicals, and ions present in processing plasmas have been studied in the laboratory and their absorption spectra have been cataloged or are in the literature for the purpose of astrophysical study. Recent developments in SMM devices have made its technology commercially available for applications outside of specialized laboratories. The methods developed over several decades in the SMM spectral region for these laboratory studies are directly applicable for diagnostic measurements in the semiconductor manufacturing industry. In this work, a continuous wave, intensity calibrated SMM absorption spectrometer was developed as a remote sensor of gas and plasma species. A major advantage of intensity calibrated rotational absorption spectroscopy is its ability to determine absolute concentrations and temperatures of plasma species from first principles without altering the plasma environment. An important part of this work was the design of the optical components which couple 500 - 750 GHz radiation through a commercial inductively coupled plasma chamber. The measurement of transmission spectra was simultaneously fit for background and absorption signal. The measured absorption signal was used to calculate absolute densities and temperatures of polar species. Measurements of molecular species were demonstrated for inductively coupled plasmas.

  18. Testing the diagnosis of dissociative identity disorder through measures of dissociation, absorption, hypnotizability and PTSD: a Norwegian pilot study.

    PubMed

    Dale, Karl Yngvar; Berg, Renate; Elden, Ake; Ødegård, Atle; Holte, Arne

    2009-01-01

    A total of 14 women meeting criteria for dissociative identity disorder (DID) based on the Diagnostic and Statistical Manual of Mental Disorders (4th ed. [DSM-IV]) were compared to a group of women (n = 10) with other dissociative diagnoses and a group of normal controls (n = 14) with regard to dissociativity, absorption, trauma related symptoms and hypnotizability. Both of the clinical groups reported histories of childhood trauma and attained high PTSD scores. The DID group differed significantly from the group with other dissociative diagnoses and the non-diagnosed comparison group with regard to hypnotizability, the variety of dissociative symptomatology, and the magnitude of dissociative symptomatology. However, no significant differences between the two clinical groups were detected with regard to absorption, general dissociative level, or symptoms related to traumatic stress. Results support the notion that DID can be regarded as a clinical entity which is separable from other dissociative disorders. Results also indicated that hypnotizability is the most important clinical feature of DID.

  19. Identification of spectrally similar materials using the USGS Tetracorder algorithm: The calcite-epidote-chlorite problem

    USGS Publications Warehouse

    Dalton, J.B.; Bove, D.J.; Mladinich, C.S.; Rockwell, B.W.

    2004-01-01

    A scheme to discriminate and identify materials having overlapping spectral absorption features has been developed and tested based on the U.S. Geological Survey (USGS) Tetracorder system. The scheme has been applied to remotely sensed imaging spectroscopy data acquired by the Airborne Visible and Infrared Imaging Spectrometer (AVIRIS) instrument. This approach was used to identify the minerals calcite, epidote, and chlorite in the upper Animas River watershed, Colorado. The study was motivated by the need to characterize the distribution of calcite in the watershed and assess its acid-neutralizing potential with regard to acidic mine drainage. Identification of these three minerals is difficult because their diagnostic spectral features are all centered at 2.3 ??m, and have similar shapes and widths. Previous studies overestimated calcite abundance as a result of these spectral overlaps. The use of a reference library containing synthetic mixtures of the three minerals in varying proportions was found to simplify the task of identifying these minerals when used in conjunction with a rule-based expert system. Some inaccuracies in the mineral distribution maps remain, however, due to the influence of a fourth spectral component, sericite, which exhibits spectral absorption features at 2.2 and 2.4 ??m that overlap the 2.3-??m absorption features of the other three minerals. Whereas the endmember minerals calcite, epidote, chlorite, and sericite can be identified by the method presented here, discrepancies occur in areas where all four occur together as intimate mixtures. It is expected that future work will be able to reduce these discrepancies by including reference mixtures containing sericite. ?? 2004 Elsevier Inc. All rights reserved.

  20. SPECTRO-POLARIMETRIC SIMULATIONS OF THE SOLAR LIMB: ABSORPTION-EMISSION Fe I 6301.5 Å AND 6302.5 Å LINE PROFILES AND TORSIONAL FLOWS IN THE INTERGRANULAR MAGNETIC FLUX CONCENTRATIONS

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Shelyag, S.

    2015-03-01

    Using radiative magnetohydrodynamic simulations of the magnetized solar photosphere and detailed spectro-polarimetric diagnostics with the Fe I 6301.5 Å and 6302.5 Å photospheric lines in the local thermodynamic equilibrium approximation, we model active solar granulation as if it was observed at the solar limb. We analyze general properties of the radiation across the solar limb, such as the continuum and the line core limb darkening and the granulation contrast. We demonstrate the presence of profiles with both emission and absorption features at the simulated solar limb, and pure emission profiles above the limb. These profiles are associated with the regionsmore » of strong linear polarization of the emergent radiation, indicating the influence of the intergranular magnetic fields on the line formation. We analyze physical origins of the emission wings in the Stokes profiles at the limb, and demonstrate that these features are produced by localized heating and torsional motions in the intergranular magnetic flux concentrations.« less

  1. Reflectance spectroscopy of pigmented cutaneous benign and malignant lesions

    NASA Astrophysics Data System (ADS)

    Borisova, E.; Jeliazkova, Al.; Pavlova, E.; Troyanova, P.; Kundurdjiev, T.; Pavlova, P.; Avramov, L.

    2014-10-01

    For the DRS measurements of skin benign, dysplastic and malignant lesions in vivo we applied halogen lamp (LS-1, OceanOptics Inc, Dunedin, Fl, USA) as a continuous light source in the region of 400-900 nm, optical probe (6+1 fibers) for the delivery of illumination and diffuse reflected light from the skin investigated and microspectrometer USB4000 (OceanOptics Inc., Dunedin, Fl, USA) for a storage and display of the spectra detected. As a diffuse reflectance standard Spectralon® plate was used to calibrate the spectrometer. The reflectance spectra obtained from normal skin in identical anatomic sites of different patients have similar spectral shape features, slightly differ by the reflectance intensity at different wavelengths, depending on the particular patient' skin phototype. One could find diagnostically important spectral features, related to specific intensity changes for a given wavelength due to specific pigments appearance, slope changes by value and sign for the reflectance spectra curves in a specific spectral range, disappearance or manifestation of minima, related to hemoglobin absorption at 410-420 nm, 543, 575 nm. Based on the observed peculiarities multispectral analysis of the reflectance spectra of the different lesions was used and diagnostically specific features are found. Discrimination using the DRS data obtained between benign compound and dermal nevi (45 cases), dysplastic nevi (17 cases) and pigmented malignant melanoma (41 cases) lesions is achieved with a diagnostic accuracy of 96 % for the benign nevi vs. MM, and 90 % for the dysplastic nevi vs. MM.

  2. Pyroxene Spectroscopy: Effects of Major Element Composition on Near, Mid and Far-Infrared Spectra

    NASA Technical Reports Server (NTRS)

    Klima, R. L.; Pieters, C. M.; Dyar, M. D.

    2005-01-01

    Pyroxene is one of the most common minerals in both evolved and undifferentiated solid bodies of the solar system. Various compositions of pyroxene have been directly studied in meteorites and lunar samples and remotely observed by telescopic and orbital measurements of the moon, Mars, Mercury, and several classes of asteroids. Laboratory studies of pyroxene spectra have shown that absorption features diagnostic of pyroxene in both the near and mid infrared are composition dependent. The challenge for remote analyses has been to reduce the level of ambiguity to allow a quantitative assessment of mineral chemistry. This study focuses on the analysis of a comprehensive set of synthetic Ca-Fe-Mg pyroxenes from the visible through far-IR (0.3-50 m) to address the fundamental constraints of crystal structure on absorption.

  3. Using the shortwave infrared to image middle ear pathologies

    PubMed Central

    Valdez, Tulio A.; Bruns, Oliver T.; Bawendi, Moungi G.

    2016-01-01

    Visualizing structures deep inside opaque biological tissues is one of the central challenges in biomedical imaging. Optical imaging with visible light provides high resolution and sensitivity; however, scattering and absorption of light by tissue limits the imaging depth to superficial features. Imaging with shortwave infrared light (SWIR, 1–2 μm) shares many advantages of visible imaging, but light scattering in tissue is reduced, providing sufficient optical penetration depth to noninvasively interrogate subsurface tissue features. However, the clinical potential of this approach has been largely unexplored because suitable detectors, until recently, have been either unavailable or cost prohibitive. Here, taking advantage of newly available detector technology, we demonstrate the potential of SWIR light to improve diagnostics through the development of a medical otoscope for determining middle ear pathologies. We show that SWIR otoscopy has the potential to provide valuable diagnostic information complementary to that provided by visible pneumotoscopy. We show that in healthy adult human ears, deeper tissue penetration of SWIR light allows better visualization of middle ear structures through the tympanic membrane, including the ossicular chain, promontory, round window niche, and chorda tympani. In addition, we investigate the potential for detection of middle ear fluid, which has significant implications for diagnosing otitis media, the overdiagnosis of which is a primary factor in increased antibiotic resistance. Middle ear fluid shows strong light absorption between 1,400 and 1,550 nm, enabling straightforward fluid detection in a model using the SWIR otoscope. Moreover, our device is easily translatable to the clinic, as the ergonomics, visual output, and operation are similar to a conventional otoscope. PMID:27551085

  4. Detection and monitoring of H2O and CO2 ice clouds on Mars

    USGS Publications Warehouse

    Bell, J.F.; Calvin, W.M.; Ockert-Bell, M. E.; Crisp, D.; Pollack, James B.; Spencer, J.

    1996-01-01

    We have developed an observational scheme for the detection and discrimination of Mars atmospheric H2O and CO2 clouds using ground-based instruments in the near infrared. We report the results of our cloud detection and characterization study using Mars near IR images obtained during the 1990 and 1993 oppositions. We focused on specific wavelengths that have the potential, based on previous laboratory studies of H2O and CO2 ices, of yielding the greatest degree of cloud detectability and compositional discriminability. We have detected and mapped absorption features at some of these wavelengths in both the northern and southern polar regions of Mars. Compositional information on the nature of these absorption features was derived from comparisons with laboratory ice spectra and with a simplified radiative transfer model of a CO2 ice cloud overlying a bright surface. Our results indicate that both H2O and CO2 ices can be detected and distinguished in the polar hood clouds. The region near 3.00 ??m is most useful for the detection of water ice clouds because there is a strong H2O ice absorption at this wavelength but only a weak CO2 ice band. The region near 3.33 ??m is most useful for the detection of CO2 ice clouds because there is a strong, relatively narrow CO2 ice band at this wavelength but only broad "continuum" H2O ice absorption. Weaker features near 2.30 ??m could arise from CO2 ice at coarse grain sizes, or surface/dust minerals. Narrow features near 2.00 ??m, which could potentially be very diagnostic of CO2 ice clouds, suffer from contamination by Mars atmospheric CO2 absorptions and are difficult to interpret because of the rather poor knowledge of surface elevation at high latitudes. These results indicate that future ground-based, Earth-orbital, and spacecraft studies over a more extended span of the seasonal cycle should yield substantial information on the style and timing of volatile transport on Mars, as well as a more detailed understanding of the role of CO2 condensation in the polar heat budget. Copyright 1996 by the American Geophysical Union.

  5. Reflection spectra and magnetochemistry of iron oxides and natural surfaces

    NASA Technical Reports Server (NTRS)

    Wasilewski, P.

    1978-01-01

    The magnetic properties and spectral characteristics of iron oxides are distinctive. Diagnostic features in reflectance spectra (0.5 to 2.4 micron) for alpha Fe2O3, gamma Fe2O3, and FeOOH include location of Fe3(+) absorption features, intensity ratios at various wavelengths, and the curve shape between 1.2 micron and 2.4 micron. The reflection spectrum of natural rock surfaces are seldom those of the bulk rock because of weathering effects. Coatings are found to be dominated by iron oxides and clay. A simple macroscopic model of rock spectra (based on concepts of stains and coatings) is considered adequate for interpretation of LANDSAT data. The magnetic properties of materials associated with specific spectral types and systematic changes in both spectra and magnetic properties are considered.

  6. Mid-infrared Laser Absorption Diagnostics for Detonation Studies

    NASA Astrophysics Data System (ADS)

    Spearrin, R. M.; Goldenstein, C. S.; Jeffries, J. B.; Hanson, R. K.

    Detonation-based engines represent a challenging application for diagnostics due to the wide range of thermodynamic conditions involved (T~500-3000 K, P~2-60 atm) and the short time scales of change (~10- 6 to 10- 4 sec) associated with such systems. Non-intrusive laser absorption diagnostics can provide high time-resolution and have been employed extensively in shock tube kinetics experiments (P~1-20 atm), offering high potential for application in detonation environments with modest utilization to date [1-4]. Limiting factors in designing effective tunable laser absorption sensors for detonation engines can be divided into two sets of challenges: high-pressure, high-temperature absorption spectroscopy and harsh thermo-mechanical environments. The present work, conducted in a high-pressure shock tube and operating detonation combustor, addresses both sets of difficulties, with the objective of developing time-resolved, in-situ temperature and concentration sensors for detonation studies.

  7. A search for the iron absorption edge in the tail of an X-ray burst from X1636 - 53

    NASA Astrophysics Data System (ADS)

    Day, C. S. R.; Fabian, A. C.; Ross, R. R.

    1992-08-01

    Model atmosphere calculations of the spectrum of a neutron star cooling after an X-ray burst show that the photoelectric edge of iron should be prominent. No clear evidence for such a redshifted feature in the spectrum of a burst from X1636 - 53 is found, and it is concluded that the iron abundance there must be less than 0.3 solar. Unless the iron abundance of the surface matter on the neutron star is highly time-dependent, the present result argues against the 4.1-keV absorption line seen in some bursts from X1636 - 53 by Waki et al. (1984) being due to iron. The iron edge will be a powerful diagnostic of the surface redshift of the neutron star in burst sources where the iron abundance is more nearly solar.

  8. A search for the iron absorption edge in the tail of an X-ray burst from X1636 - 53

    NASA Technical Reports Server (NTRS)

    Day, C. S. R.; Fabian, A. C.; Ross, R. R.

    1992-01-01

    Model atmosphere calculations of the spectrum of a neutron star cooling after an X-ray burst show that the photoelectric edge of iron should be prominent. No clear evidence for such a redshifted feature in the spectrum of a burst from X1636 - 53 is found, and it is concluded that the iron abundance there must be less than 0.3 solar. Unless the iron abundance of the surface matter on the neutron star is highly time-dependent, the present result argues against the 4.1-keV absorption line seen in some bursts from X1636 - 53 by Waki et al. (1984) being due to iron. The iron edge will be a powerful diagnostic of the surface redshift of the neutron star in burst sources where the iron abundance is more nearly solar.

  9. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Jennings, Jeff; Levesque, Emily M., E-mail: emsque@uw.edu

    We have identified the H α absorption feature as a new spectroscopic diagnostic of luminosity class in K- and M-type stars. From high-resolution spectra of 19 stars with well-determined physical properties (including effective temperatures and stellar radii), we measured equivalent widths for H α and the Ca ii triplet and examined their dependence on both luminosity class and stellar radius. H α shows a strong relation with both luminosity class and radius that extends down to late M spectral types. This behavior in H α has been predicted as a result of the density-dependent overpopulation of the metastable 2s levelmore » in hydrogen, an effect that should become dominant for Balmer line formation in non-LTE conditions. We conclude that this new metallicity-insensitive diagnostic of luminosity class in cool stars could serve as an effective means of discerning between populations such as Milky Way giants and supergiant members of background galaxies.« less

  10. Quantifying mineral abundances of complex mixtures by coupling spectral deconvolution of SWIR spectra (2.1-2.4 μm) and regression tree analysis

    USGS Publications Warehouse

    Mulder, V.L.; Plotze, Michael; de Bruin, Sytze; Schaepman, Michael E.; Mavris, C.; Kokaly, Raymond F.; Egli, Markus

    2013-01-01

    This paper presents a methodology for assessing mineral abundances of mixtures having more than two constituents using absorption features in the 2.1-2.4 μm wavelength region. In the first step, the absorption behaviour of mineral mixtures is parameterised by exponential Gaussian optimisation. Next, mineral abundances are predicted by regression tree analysis using these parameters as inputs. The approach is demonstrated on a range of prepared samples with known abundances of kaolinite, dioctahedral mica, smectite, calcite and quartz and on a set of field samples from Morocco. The latter contained varying quantities of other minerals, some of which did not have diagnostic absorption features in the 2.1-2.4 μm region. Cross validation showed that the prepared samples of kaolinite, dioctahedral mica, smectite and calcite were predicted with a root mean square error (RMSE) less than 9 wt.%. For the field samples, the RMSE was less than 8 wt.% for calcite, dioctahedral mica and kaolinite abundances. Smectite could not be well predicted, which was attributed to spectral variation of the cations within the dioctahedral layered smectites. Substitution of part of the quartz by chlorite at the prediction phase hardly affected the accuracy of the predicted mineral content; this suggests that the method is robust in handling the omission of minerals during the training phase. The degree of expression of absorption components was different between the field sample and the laboratory mixtures. This demonstrates that the method should be calibrated and trained on local samples. Our method allows the simultaneous quantification of more than two minerals within a complex mixture and thereby enhances the perspectives of spectral analysis for mineral abundances.

  11. Using high spectral resolution spectrophotometry to study broad mineral absorption features on Mars

    NASA Technical Reports Server (NTRS)

    Blaney, D. L.; Crisp, D.

    1993-01-01

    Traditionally telescopic measurements of mineralogic absorption features have been made using relatively low to moderate (R=30-300) spectral resolution. Mineralogic absorption features tend to be broad so high resolution spectroscopy (R greater than 10,000) does not provide significant additional compositional information. Low to moderate resolution spectroscopy allows an observer to obtain data over a wide wavelength range (hundreds to thousands of wavenumbers) compared to the several wavenumber intervals that are collected using high resolution spectrometers. However, spectrophotometry at high resolution has major advantages over lower resolution spectroscopy in situations that are applicable to studies of the Martian surface, i.e., at wavelengths where relatively weak surface absorption features and atmospheric gas absorption features both occur.

  12. Hyperspectral photoacoustic spectroscopy of highly-absorbing samples for diagnostic ocular imaging applications

    NASA Astrophysics Data System (ADS)

    Lim, Hoong-Ta; Murukeshan, Vadakke Matham

    2017-01-01

    Photoacoustic spectroscopy has been used to measure optical absorption coefficient and the application of tens of wavelength bands in photoacoustic spectroscopy was reported. Using optical methods, absorption-related information is, generally, derived from reflectance or transmittance values. Hence measurement accuracy is limited for highly absorbing samples where the reflectance or transmittance is too low to give reasonable signal-to-noise ratio. In this context, this paper proposes and illustrates a hyperspectral photoacoustic spectroscopy system to measure the absorption-related properties of highly absorbing samples directly. The normalized optical absorption coefficient spectrum of the highly absorbing iris is acquired using an optical absorption coefficient standard. The proposed concepts and the feasibility of the developed diagnostic medical imaging system are demonstrated using fluorescent microsphere suspensions and porcine eyes as test samples.

  13. Regolith-geology mapping with support vector machine: A case study over weathered Ni-bearing peridotites, New Caledonia

    NASA Astrophysics Data System (ADS)

    De Boissieu, Florian; Sevin, Brice; Cudahy, Thomas; Mangeas, Morgan; Chevrel, Stéphane; Ong, Cindy; Rodger, Andrew; Maurizot, Pierre; Laukamp, Carsten; Lau, Ian; Touraivane, Touraivane; Cluzel, Dominique; Despinoy, Marc

    2018-02-01

    Accurate maps of Earth's geology, especially its regolith, are required for managing the sustainable exploration and development of mineral resources. This paper shows how airborne imaging hyperspectral data collected over weathered peridotite rocks in vegetated, mountainous terrane in New Caledonia were processed using a combination of methods to generate a regolith-geology map that could be used for more efficiently targeting Ni exploration. The image processing combined two usual methods, which are spectral feature extraction and support vector machine (SVM). This rationale being the spectral features extraction can rapidly reduce data complexity by both targeting only the diagnostic mineral absorptions and masking those pixels complicated by vegetation, cloud and deep shade. SVM is a supervised classification method able to generate an optimal non-linear classifier with these features that generalises well even with limited training data. Key minerals targeted are serpentine, which is considered as an indicator for hydrolysed peridotitic rock, and iron oxy-hydroxides (hematite and goethite), which are considered as diagnostic of laterite development. The final classified regolith map was assessed against interpreted regolith field sites, which yielded approximately 70% similarity for all unit types, as well as against a regolith-geology map interpreted using traditional datasets (not hyperspectral imagery). Importantly, the hyperspectral derived mineral map provided much greater detail enabling a more precise understanding of the regolith-geological architecture where there are exposed soils and rocks.

  14. Fab MOR03268 triggers absorption shift of a diagnostic dye via packaging in a solvent-shielded Fab dimer interface.

    PubMed

    Hillig, Roman C; Urlinger, Stefanie; Fanghänel, Jörg; Brocks, Bodo; Haenel, Cornelia; Stark, Yvonne; Sülzle, Detlev; Svergun, Dmitri I; Baesler, Siegfried; Malawski, Guido; Moosmayer, Dieter; Menrad, Andreas; Schirner, Michael; Licha, Kai

    2008-03-14

    Molecular interactions between near-IR fluorescent probes and specific antibodies may be exploited to generate novel smart probes for diagnostic imaging. Using a new phage display technology, we developed such antibody Fab fragments with subnanomolar binding affinity for tetrasulfocyanine, a near-IR in vivo imaging agent. Unexpectedly, some Fabs induced redshifts of the dye absorption peak of up to 44 nm. This is the largest shift reported for a biological system so far. Crystal structure determination and absorption spectroscopy in the crystal in combination with microcalorimetry and small-angle X-ray scattering in solution revealed that the redshift is triggered by formation of a Fab dimer, with tetrasulfocyanine being buried in a fully closed protein cavity within the dimer interface. The derived principle of shifting the absorption peak of a symmetric dye via packaging within a Fab dimer interface may be transferred to other diagnostic fluorophores, opening the way towards smart imaging probes that change their wavelength upon interaction with an antibody.

  15. Mid-infrared laser-absorption diagnostic for vapor-phase fuel mole fraction and liquid fuel film thickness

    NASA Astrophysics Data System (ADS)

    Porter, J. M.; Jeffries, J. B.; Hanson, R. K.

    2011-02-01

    A novel two-wavelength mid-infrared laser-absorption diagnostic has been developed for simultaneous measurements of vapor-phase fuel mole fraction and liquid fuel film thickness. The diagnostic was demonstrated for time-resolved measurements of n-dodecane liquid films in the absence and presence of n-decane vapor at 25°C and 1 atm. Laser wavelengths were selected from FTIR measurements of the C-H stretching band of vapor n-decane and liquid n-dodecane near 3.4 μm (3000 cm-1). n-Dodecane film thicknesses <20 μm were accurately measured in the absence of vapor, and simultaneous measurements of n-dodecane liquid film thickness and n-decane vapor mole fraction (300 ppm) were measured with <10% uncertainty for film thicknesses <10 μm. A potential application of the measurement technique is to provide accurate values of vapor mole fraction in combustion environments where strong absorption by liquid fuel or oil films on windows make conventional direct absorption measurements of the gas problematic.

  16. Process parameter-growth environment-film property relationships for reactive sputter deposited metal (V, Nb, Zr, Y, Au) oxide, nitride, and oxynitride films. Final report, 1 January 1989-30 June 1993

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Aita, C.R.

    1993-09-30

    The research developed process parameter-growth environment-film property relations (phase maps) for model sputter-deposited transition metal oxides, nitrides, and oxynitrides grown by reactive sputter deposition at low temperature. Optical emission spectrometry was used for plasma diagnostics. The results summarized here include the role of sputtered metal-oxygen molecular flux in oxide film growth; structural differences in highest valence oxides including conditions for amorphous growth; and using fundamental optical absorption edge features to probe short range structural disorder. Eight appendices containing sixteen journal articles are included.

  17. Pastes: what do they contain? How do they work?

    PubMed

    Juch, R D; Rufli, T; Surber, C

    1994-01-01

    Pastes are semisolid stiff preparations containing a high proportion of finely powdered material. Powders such as zinc oxide, titanium dioxide, starch, kaolin or talc are incorporated in high concentrations into a preferably lipophilic, greasy vehicle. A clinically distinctive feature which is generally attributed to pastes is the quality to absorb exudates by nature of the powder or other absorptive components. Reviewing the various pharmacopoeias serious doubts arise from the various formulas of pastes and their absorptive features. The zinc oxide pastes of the USP XXII, the DAB 10 and BP 88 (US, German and British pharmacopoeias). are composed of petrolatum, zinc oxide and starch. Petrolatum, a highly lipophilic, water-immiscible vehicle surrounds the powder particles preventing any absorption of water or exudates. The goal of our investigation was to test a simple experimental setting to characterize the clinically important absorptive feature of powders and pastes. The absorptive features of the powders were determined by the method of Enslin. The absorptive features of the paste preparations were calculated from the weight difference between the paste preparation before and after incubation with water using a simple standardized procedure. The absorptive features of titanium dioxide, zinc oxide, kaolin, corn starch and methylcellulose powder in pharmacopoeia quality were determined. Zinc oxide and kaolin powder showed the highest absorption of 1,000 mg water/g powder (100%). The water absorption of corn starch and titanium dioxide was 700 and 450 mg/g powder, respectively. The absorptive features of a series of paste preparations were studied in a simple experimental setting. The data show that two-phase pastes consisting of two immiscible components, one (the dispersed or inner phase; powder) being suspended in the other (the continuous or outer phase; lipophilic vehicle), have no absorptive features. In contrast, three-phase pastes consisting of a hydrophilic two-phase emulsion with high concentrations of incorporated powder (cream pastes) show considerable water uptake. We conclude that the classical two-phase pastes such as the zinc oxide pastes have no absorptive features. On the contrary, these formulations are highly occlusive. Therefore lipophilic pastes are only indicated when protection of intact skin against aggressive body exudates and humidity is required. The hydrophilic three-phase pastes or cream pastes show considerable water uptake and fulfil common expectations of pastes to dry the skin.

  18. Extending the McDonald Observatory Serendipitous Survey of UV/Blue Asteroid Spectra

    NASA Technical Reports Server (NTRS)

    Vilas, Faith; Cochran, A. L.

    1999-01-01

    Moderate resolution asteroid spectra in the 350 - 650 nm spectral range acquired randomly over many years (Cochran and Vilas, Icarus v 127, 121, 1997) identified absorption features in spectra of some of the asteroids. A feature centered at 430 nm was identified in the spectra of some low-albedo asteroids (C class and subclass), similar to the feature identified by Vilas et al. (Icarus, v. 102, 225,1993) in other low-albedo asteroid spectra and attributed to a ferric iron spin-forbidden transition in iron alteration minerals such as jarosite. Features at 505 nm and 430 nm were identified in the spectrum of 4 Vesta. The 505-nm feature is highly diagnostic of the amount and form of calcium in pyroxenes. This suggested further research on the sharpness and spectral placement of this feature in the spectra of Vesta and Vestoids (e.g., Cochran and Vilas, Icarus v. 134, 207, 1998). In 1997 and 1998, additional UV/blue spectra were obtained at the 2.7-m Harlan J. Smith telescope with a facility cassegrain spectrograph. These included spectra of low-albedo asteroids, the R-class asteroid 349 Dembowska, and the M-class asteroid 135 Hertha. These spectra will be presented and identified features will be discussed.

  19. Photoionization Modeling and the K Lines of Iron

    NASA Technical Reports Server (NTRS)

    Kallman, T. R.; Palmeri, P.; Bautista, M. A.; Mendoza, C.; Krolik, J. H.

    2004-01-01

    We calculate the efficiency of iron K line emission and iron K absorption in photoionized models using a new set of atomic data. These data are more comprehensive than those previously applied to the modeling of iron K lines from photoionized gases, and allow us to systematically examine the behavior of the properties of line emission and absorption as a function of the ionization parameter, density and column density of model constant density clouds. We show that, for example, the net fluorescence yield for the highly charged ions is sensitive to the level population distribution produced by photoionization, and these yields are generally smaller than those predicted assuming the population is according to statistical weight. We demonstrate that the effects of the many strongly damped resonances below the K ionization thresholds conspire to smear the edge, thereby potentially affecting the astrophysical interpretation of absorption features in the 7-9 keV energy band. We show that the centroid of the ensemble of K(alpha) lines, the K(beta) energy, and the ratio of the K(alpha(sub 1)) to K(alpha(sub 2)) components are all diagnostics of the ionization parameter of our model slabs.

  20. AVIRIS performance during the 1987 flight season: An AVIRIS project assessment and summary of the NASA-sponsored performance evaluation

    NASA Technical Reports Server (NTRS)

    Vane, Gregg; Porter, Wallace M.; Reimer, John H.; Chrien, Thomas G.; Green, Robert O.

    1988-01-01

    Results are presented of the assessment of AVIRIS performance during the 1987 flight season by the AVIRIS project and the earth scientists who were chartered by NASA to conduct an independent data quality and sensor performance evaluation. The AVIRIS evaluation program began in late June 1987 with the sensor meeting most of its design requirements except for signal-to-noise ratio in the fourth spectrometer, which was about half of the required level. Several events related to parts failures and design flaws further reduced sensor performance over the flight season. Substantial agreement was found between the assessments by the project and the independent investigators of the effects of these various factors. A summary of the engineering work that is being done to raise AVIRIS performance to its required level is given. In spite of degrading data quality over the flight season, several exciting scientific results were obtained from the data. These include the mapping of the spatial variation of atmospheric precipitable water, detection of environmentally-induced shifts in the spectral red edge of stressed vegetation, detection of spectral features related to pigment, leaf water and ligno-cellulose absorptions in plants, and the identification of many diagnostic mineral absorption features in a variety of geological settings.

  1. The Mysterious 6565 Å Absorption Feature of the Galactic Halo

    NASA Astrophysics Data System (ADS)

    Sethi, Shiv K.; Shchekinov, Yuri; Nath, Biman B.

    2017-12-01

    We consider various possible scenarios to explain the recent observation of what has been called a broad Hα absorption in our Galactic halo, with peak optical depth τ ≃ 0.01 and equivalent width W≃ 0.17 \\mathringA . We show that the absorbed feature cannot arise from the circumgalactic and ISM Hα absorption. As the observed absorption feature is quite broad ({{Δ }}λ ≃ 30 \\mathringA ), we also consider CNO lines that lie close to Hα as possible alternatives to explain the feature. We show that such lines could also not account for the observed feature. Instead, we suggest that it could arise from diffuse interstellar bands (DIBs) carriers or polyaromatic hydrocarbons (PAHs) absorption. While we identify several such lines close to the Hα transition, we are unable to determine the molecule responsible for the observed feature, partly because of selection effects that prevent us from identifying DIBs/PAHs features close to Hα using local observations. Deep integration of a few extragalactic sources with high spectral resolution might allow us to distinguish between different possible explanations.

  2. Estimating mineral abundances of clay and gypsum mixtures using radiative transfer models applied to visible-near infrared reflectance spectra

    NASA Astrophysics Data System (ADS)

    Robertson, K. M.; Milliken, R. E.; Li, S.

    2016-10-01

    Quantitative mineral abundances of lab derived clay-gypsum mixtures were estimated using a revised Hapke VIS-NIR and Shkuratov radiative transfer model. Montmorillonite-gypsum mixtures were used to test the effectiveness of the model in distinguishing between subtle differences in minor absorption features that are diagnostic of mineralogy in the presence of strong H2O absorptions that are not always diagnostic of distinct phases or mineral abundance. The optical constants (k-values) for both endmembers were determined from bi-directional reflectance spectra measured in RELAB as well as on an ASD FieldSpec3 in a controlled laboratory setting. Multiple size fractions were measured in order to derive a single k-value from optimization of the optical path length in the radiative transfer models. It is shown that with careful experimental conditions, optical constants can be accurately determined from powdered samples using a field spectrometer, consistent with previous studies. Variability in the montmorillonite hydration level increased the uncertainties in the derived k-values, but estimated modal abundances for the mixtures were still within 5% of the measured values. Results suggest that the Hapke model works well in distinguishing between hydrated phases that have overlapping H2O absorptions and it is able to detect gypsum and montmorillonite in these simple mixtures where they are present at levels of ∼10%. Care must be taken however to derive k-values from a sample with appropriate H2O content relative to the modeled spectra. These initial results are promising for the potential quantitative analysis of orbital remote sensing data of hydrated minerals, including more complex clay and sulfate assemblages such as mudstones examined by the Curiosity rover in Gale crater.

  3. Inherited Fe and Ti electron transition spectroscopic features in altered ultramafic-carbonatite intrusives

    NASA Astrophysics Data System (ADS)

    Shavers, E. J.; Ghulam, A.; Encarnacion, J. P.

    2016-12-01

    Spectroscopic reflectance in the visible to short-wave infrared region is an important tool for remote geologic mapping and is applied at scales from satellite to field measurements. Remote geologic mapping is challenging in regions subject to significant surficial weathering. Here we identify absorption features found in altered volcanic pipes and dikes in the Avon Volcanic District, Missouri, that are inherited from the original ultramafic and carbonatite lithology. Alteration ranges from small degree hydrothermal alteration to extensive laterization. The absorption features are three broad minima centered near 690, 890, and 1100 nm. Features in this region are recognized to be caused by ferric and ferrous Fe minerals including olivine, carbonates, chlorite, and goethite all of which are found among the Avon pipes and dikes that are in various stages of alteration. Iron-related intervalence charge transfer and crystal field perturbations of ions are the principal causes of the spectroscopic features in the visible to near-infrared region yet spectra are also distorted by factors like texture and the presence of opaque minerals known to reduce overall reflectance. In the Avon samples, Fe oxide content can reach >15 wt% leading to prominent absorption features even in the less altered ultramafics with reflectance curve maxima as low as 5%. The exaggerated minima allow the altered intrusive rocks to stand out among other weathered lithologies that will often have clay features in the region yet have lower iron concentration. The absorption feature centered near 690 nm is particularly noteworthy. Broad mineral-related absorption features centered at this wavelength are rare but have been linked to Ti3+ in octahedral coordination. The reduced form of Ti is not common in surface lithologies. Titanium-rich andradite has Ti3+ in the octahedral position, is resistant to weathering, is found among the Avon lithologies including ultramafic, carbonatite, and carbonated breccia, and is identified here as the cause of the 690 nm absorption feature. The Ti3+ absorption feature centered near 690 nm and strong Fe absorption features at 890 and 1100 nm may be useful indicators of rare intrusive lithologies in remote geologic mapping.

  4. Ultraviolet Spectroscopy of Tidal Disruption Flares

    NASA Astrophysics Data System (ADS)

    Cenko, Stephen B.

    2017-08-01

    When a star passes within the sphere of disruption of a massive black hole, tidal forces will overcome self-gravity and unbind the star. While approximately half of the stellar debris is ejected at high velocities, the remaining material stays bound to the black hole and accretes, resulting in a luminous, long-lived transient known as a tidal disruption flare (TDF). In addition to serving as unique laboratories for accretion physics,TDFs offer the hope of measuring black hole masses in galaxies much too distant for resolved kinematic studies.In order to realize this potential, we must better understand the detailed processes by which the bound debris circularizes and forms an accretion disk. Spectroscopy is critical to this effort, as emission and absorption line diagnostics provide insight into the location and physical state (velocity, density, composition) of the emitting gas (in analogy with quasars). UV spectra are particularly critical, as most strong atomic features fall in this bandpass, and high-redshift TDF discoveries from LSST will sample rest-frame UV wavelengths.Here I present recent attempts to obtain UV spectra of tidal disruption flares. I describe the UV spectrum of ASASSN-14li, in which we detect three classes of features: narrow absorption from the Milky Way (probably a high-velocity cloud), and narrow absorption and broad (2000-8000 km s-1) emission lines at or near the systemic host velocity. The absorption lines are blueshifted with respect to the emission lines by 250-400 km s-1. Due both to this velocity offset and the lack of common low-ionization features (Mg II, Fe II), we argue these arise from the same absorbing material responsible for the low-velocity outflow discovered at X-ray wavelengths. The broad nuclear emission lines display a remarkable abundance pattern: N III], N IV], and He II are quite prominent, while the common quasar emission lines of C III] and Mg II are weak or entirely absent. Detailed modeling of this spectrum will help elucidate fundamental questions regarding the nature of the emission processes at work in TDFs, while future UV spectroscopy of ASASSN-14li would help to confirm (or refute) the previously proposed connection between TDFs and “N-rich” quasars.

  5. EGR distribution and fluctuation probe based on CO2 measurements

    DOEpatents

    Parks, II, James E.; Partridge, Jr., William P.; Yoo, Ji Hyung

    2015-06-30

    A diagnostic system having a laser, an EGR probe, a detector and a processor. The laser may be a swept-.lamda. laser having a sweep range including a significant CO.sub.2 feature and substantially zero absorption regions. The sweep range may extend from about 2.708 .mu.m to about 2.7085 .mu.m. The processor may determine CO.sub.2 concentration as a function of the detector output signal. The processor may normalize the output signal as a function of the zero absorption regions. The system may include a plurality of EGR probes receiving light from a single laser. The system may include a separate detector for each probe. Alternatively, the system may combine the light returning from the different probes into a composite beam that is measured by a single detector. A unique modulation characteristic may be introduced into each light beam before combination so that the processor can discriminate between them in the composite beam.

  6. Improved visualization of breast cancer features in multifocal carcinoma using phase-contrast and dark-field mammography: an ex vivo study.

    PubMed

    Grandl, Susanne; Scherer, Kai; Sztrókay-Gaul, Anikó; Birnbacher, Lorenz; Willer, Konstantin; Chabior, Michael; Herzen, Julia; Mayr, Doris; Auweter, Sigrid D; Pfeiffer, Franz; Bamberg, Fabian; Hellerhoff, Karin

    2015-12-01

    Conventional X-ray attenuation-based contrast is inherently low for the soft-tissue components of the female breast. To overcome this limitation, we investigate the diagnostic merits arising from dark-field mammography by means of certain tumour structures enclosed within freshly dissected mastectomy samples. We performed grating-based absorption, absolute phase and dark-field mammography of three freshly dissected mastectomy samples containing bi- and multifocal carcinoma using a compact, laboratory Talbot-Lau interferometer. Preoperative in vivo imaging (digital mammography, ultrasound, MRI), postoperative histopathological analysis and ex vivo digital mammograms of all samples were acquired for the diagnostic verification of our results. In the diagnosis of multifocal tumour growth, dark-field mammography seems superior to standard breast imaging modalities, providing a better resolution of small, calcified tumour nodules, demarcation of tumour boundaries with desmoplastic stromal response and spiculated soft-tissue strands extending from an invasive ductal breast cancer. On the basis of selected cases, we demonstrate that dark-field mammography is capable of outperforming conventional mammographic imaging of tumour features in both calcified and non-calcified tumours. Presuming dose optimization, our results encourage further studies on larger patient cohorts to identify those patients that will benefit the most from this promising additional imaging modality. • X-ray dark-field mammography provides significantly improved visualization of tumour features • X-ray dark-field mammography is capable of outperforming conventional mammographic imaging • X-ray dark-field mammography provides imaging sensitivity towards highly dispersed calcium grains.

  7. [The Diagnostics of Detonation Flow External Field Based on Multispectral Absorption Spectroscopy Technology].

    PubMed

    Lü, Xiao-jing; Li, Ning; Weng, Chun-sheng

    2016-03-01

    Compared with traditional sampling-based sensing method, absorption spectroscopy technology is well suitable for detonation flow diagnostics, since it can provide with us fast response, nonintrusive, sensitive solution for situ measurements of multiple flow-field parameters. The temperature and concentration test results are the average values along the laser path with traditional absorption spectroscopy technology, while the boundary of detonation flow external field is unknown and it changes all the time during the detonation engine works, traditional absorption spectroscopy technology is no longer suitable for detonation diagnostics. The trend of line strength with temperature varies with different absorption lines. By increasing the number of absorption lines in the test path, more information of the non-uniform flow field can be obtained. In this paper, based on multispectral absorption technology, the reconstructed model of detonation flow external field distribution was established according to the simulation results of space-time conservation element and solution element method, and a diagnostic method of detonation flow external field was given. The model deviation and calculation error of the least squares method adopted were studied by simulation, and the maximum concentration and temperature calculation error was 20.1% and 3.2%, respectively. Four absorption lines of H2O were chosen and detonation flow was scanned at the same time. The detonation external flow testing system was set up for the valveless gas-liquid continuous pulse detonation engine with the diameter of 80 mm. Through scanning H2O absorption lines with a high frequency of 10 kHz, the on-line detection of detonation external flow was realized by direct absorption method combined with time-division multiplexing technology, and the reconstruction of dynamic temperature distribution was realized as well for the first time, both verifying the feasibility of the test method. The test results show that both of the temperature and H2O concentration rose with the arrival of detonation wave. With the increase of the vertical distance between the detonation tube nozzle and the laser path, the time of temperature and concentration coming to the peak delayed, and the temperature variation trend tended to slow down. At 20 cm from detonation tube nozzle, the maximum temperature hit 1 329 K and the maximum H2O concentration of 0.19 occurred at 4 ms after ignition. The research can provide with us the support for expanding the detonation test field with absorption spectroscopy technology, and can also help to promote the detonation mechanism research and to enhance the level of detonation engine control technology.

  8. VizieR Online Data Catalog: CaII H&K to CaII IRT echelle spectra (Montes+, 2000)

    NASA Astrophysics Data System (ADS)

    Montes, D.; Fernandez-Figueroa, M. J.; de Castro, E.; Cornide, M.; Latorre, A.; Sanz-Forcada, J.

    2000-11-01

    This is the third paper of a series aimed at studying the chromosphere of active binary systems using the information provided for several optical spectroscopic features. High resolution echelle spectra including all the optical chromospheric activity indicators from the CaII H&K to CaII IRT lines are analysed here for 16 systems. The chromospheric contribution in these lines has been determined using the spectral subtraction technique. Very broad wings have been found in the subtracted Hα profile of the very active star HU Vir. These profiles are well matched using a two-component Gaussian fit (narrow and broad) and the broad component can be interpreted as arising from microflaring. Red-shifted absorption features in the Hα line have been detected in several systems and excess emission in the blue wing of FG UMa was also detected. These features indicate that several dynamical processes, or a combination of them, may be involved. Using the EHα/EHβ ratio as a diagnostic we have detected prominence-like extended material viewed off the limb in many stars of the sample, and prominences viewed against the disk at some orbital phases in the dwarfs OU Gem and BF Lyn. The He I D3 line has been detected as an absorption feature in mainly all the giants of the sample. Total filling-in of the He I D3, probably due to microflaring activity, is observed in HU Vir. Self-absorption with red asymmetry is detected in the CaII H&K lines of the giants 12 Cam, FG UMa and BM CVn. All the stars analysed show clear filled-in CaII IRT lines or even notable emission reversal. The small values of the E8542/E8498 ratio we have found indicate CaII IRT emission arises from plage-like regions. Orbital phase modulation of the chromospheric emission has been detected in some systems, in the case of HU Vir evidence of an active longitude area has been found. (5 data files).

  9. UV Spectroscopy of Lucy Mission Targets

    NASA Astrophysics Data System (ADS)

    Thomas, Cristina

    2017-08-01

    The Trojan asteroids are a significant population of primitive bodies trapped in Jupiter's stable L4 and L5 Lagrange regions. Their physical properties and existence in these particular orbits constrain the chemical and dynamical processes in our early Solar System. NASA's recently selected Lucy mission will perform the first reconnaissance of these asteroids and will answer many fundamental questions about the population. The compositions of the Trojans are not well understood. Spectroscopy and spectrophotometry in visible and near-infrared wavelengths show red slopes (spectra with reflectivity increasing towards the long wavelength end of the spectrum) and no diagnostic spectral absorption features. However, past spectral and photometric observations suggest there are unobserved features in ultraviolet wavelengths. We propose to obtain ultraviolet spectroscopy with WFC3 of four Trojan asteroids that are targets of the Lucy mission. Lucy will not have the capability to obtain ultraviolet spectra. The proposed observations can only be made using Hubble. We will determine if there are UV spectral features, as suggested by visible wavelength observations, and connect these features to candidate compositional components. These observations will enable connections between the compositions of Trojans and dynamical models of the early Solar System.

  10. Tracers of Star Formation in the Near Infrared

    NASA Astrophysics Data System (ADS)

    Martins, L.; Ardila, A.; Gruenwald, R.; de Souza, R.

    2010-04-01

    Starburst features in the optical are nowadays well known, but the use of this knowledge is not always possible (e.g. objects heavily obscured). In this case the near-IR is of unprecedented value. Recent models show that TP-AGB stars should dominate the NIR spectra of populations 0.3 to 2 Gyr old. While the optical spectra is insensitive to the presence of these stars, the near-IR changes dramatically. Not only does the absolute flux in the near-IR is affected, but also peculiar absorption features appear. These features can be used as indicators of 1 Gyr stellar population. In this work we used the IRTF Spex to create the first empirical database of NIR spectra of carefully selected starbursts, to test for the first time and in a consistent way the new stellar population models that account for the TP-AGB. The methodology used is to do stellar population synthesis in the optical and in the NIR, and compare the predictions of both spectral regions. We also compare the strength of important features of the TP-AGB stars, like the CN (1.1 microns) and CO (2.3 microns) bands with optical diagnostics.

  11. Phyllosilicate absorption features in main-belt and outer-belt asteroid reflectance spectra.

    PubMed

    Vilas, F; Gaffey, M J

    1989-11-10

    Absorption features having depths up to 5% are identified in high-quality, high-resolution reflectance spectra of 16 dark asteroids in the main belt and in the Cybele and Hilda groups. Analogs among the CM2 carbonaceous chondrite meteorites exist for some of these asteroids, suggesting that these absorptions are due to iron oxides in phyllosilicates formed on the asteroidal surfaces by aqueous alteration processes. Spectra of ten additional asteroids, located beyond the outer edge of the main belt, show no discernible absorption features, suggesting that aqueous alteration did not always operate at these heliocentric distances.

  12. Phyllosilicate absorption features in main-belt and outer-belt asteroid reflectance spectra

    NASA Technical Reports Server (NTRS)

    Vilas, Faith; Gaffey, Michael J.

    1989-01-01

    Absorption features having depths up to 5 percent are identified in high-quality, high-resolution reflectance spectra of 16 dark asteroids in the main belt and in the Cybele and Hilda groups. Analogs among the CM2 carbonaceous chondrite meteorites exist for some of these asteroids, suggesting that these absorptions are due to iron oxides in phyllosilicates formed on the asteroidal surfaces by aqueous alteration processes. Spectra of ten additional asteroids, located beyond the outer edge of the main belt, show no discernible absorption features, suggesting that aqueous alteration did not always operate at these heliocentric distances.

  13. Diagnostics of jaundice from the change of the transmission coefficient of the human body

    NASA Astrophysics Data System (ADS)

    Guminetskiy, S. G.; Kirsh, N. L.; Lomanets, V. S.; Lazurka, I. I.; Yakobets, I. I.

    2004-06-01

    The paper deals with the absorption spectra of bilirubin solutions, patient blood plasma with jaundice manifestations with a different degree of disease and whole blood. Using as an analysis base the dependencies of blood plasma absorption spectra on bilirubin concentration in this blood there has been proposed the method of disease diagnostics with jaundice manifestations, and there has been realized the corresponding portable laboratory device, the functioning of which is based on registering the radiation propagated through the ear lobule.

  14. Onco-hematological diagnostics by IR spectroscopy

    NASA Astrophysics Data System (ADS)

    Darchuk, Sergey D.; Korovina, Larisa A.; Sizov, Fiodor F.; Bebeshko, Vladimir G.

    1998-10-01

    Application of the infrared (IR) spectroscopy to early medical onco-hematological diagnostics, in particular to leukemia, is described. Leukemia is characterized by the orthophosphates acid (soluble) forms (HPO42-) accumulation in bone apatites. Bone hydroxyapatite contains predominantly basic PO43- nonsoluble orthophosphate. At the same time condensed forms of pyrophosphates (e.g., CaH2P3O7) in bones and especially in dried urine were found by the analysis of IR absorption spectra of persons with leukemia. It was show that the dried urine infrared quantitative absorption spectra investigations of phosphates contents make it possible to trace the dynamics of these elements contents during the leukemia progression and can serve for onco-hematological diagnostics at early stage of leukemia.

  15. Interstellar silicate dust in the z = 0.685 absorber toward TXS 0218+357

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Aller, Monique C.; Kulkarni, Varsha P.; Liger, Nicholas

    2014-04-10

    We report the detection of interstellar silicate dust in the z {sub abs} = 0.685 absorber along the sightline toward the gravitationally lensed blazar TXS 0218+357. Using Spitzer Space Telescope Infrared Spectrograph data, we detect the 10 μm silicate absorption feature with a detection significance of 10.7σ. We fit laboratory-derived silicate dust profile templates obtained from the literature to the observed 10 μm absorption feature and find that the best single-mineral fit is obtained using an amorphous olivine template with a measured peak optical depth of τ{sub 10} = 0.49 ± 0.02, which rises to τ{sub 10} ∼ 0.67 ±more » 0.04 if the covering factor is taken into account. We also detected the 18 μm silicate absorption feature in our data with a >3σ significance. Due to the proximity of the 18 μm absorption feature to the edge of our covered spectral range, and associated uncertainty about the shape of the quasar continuum normalization near 18 μm, we do not independently fit this feature. We find, however, that the shape and depth of the 18 μm silicate absorption are well matched to the amorphous olivine template prediction, given the optical depth inferred for the 10 μm feature. The measured 10 μm peak optical depth in this absorber is significantly higher than those found in previously studied quasar absorption systems. However, the reddening, 21 cm absorption, and velocity spread of Mg II are not outliers relative to other studied absorption systems. This high optical depth may be evidence for variations in dust grain properties in the interstellar medium between this and the previously studied high redshift galaxies.« less

  16. THE 3–4  μ m SPECTRA OF JUPITER TROJAN ASTEROIDS

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Brown, M. E., E-mail: mbrown@caltech.edu

    To date, reflectance spectra of Jupiter Trojan asteroids have revealed no distinctive absorption features. For this reason, the surface composition of these objects remains a subject of speculation. Spectra have revealed, however, that the Jupiter Trojan asteroids consist of two distinct sub-populations that differ in the optical to near-infrared colors. The origins and compositional differences between the two sub-populations remain unclear. Here, we report the results from a 2.2–3.8 μ m spectral survey of a collection of 16 Jupiter Trojan asteroids, divided equally between the two sub-populations. We find clear spectral absorption features centered around 3.1 μ m in themore » less-red population. Additional absorption consistent with that expected from organic materials might also be present. No such features are see in the red population. A strong correlation exists between the strength of the 3.1 μ m absorption feature and the optical to near-infrared color of the objects. While, traditionally, absorptions such as these in dark asteroids are modeled as being due to fine-grain water frost, we find it physically implausible that the special circumstances required to create such fine-grained frost would exist on a substantial fraction of the Jupiter Trojan asteroids. We suggest, instead, that the 3.1 μ m absorption on Trojans and other dark asteroids could be due to N–H stretch features. Additionally, we point out that reflectivities derived from WISE observations show a strong absorption beyond 4 μ m for both populations. The continuum of 3.1 μ m features and the common absorption beyond 4 μ m might suggest that both sub-populations of Jupiter Trojan asteroids formed in the same general region of the early solar system.« less

  17. Spatially Resolved HCN Absorption Features in the Circumnuclear Region of NGC 1052

    NASA Astrophysics Data System (ADS)

    Sawada-Satoh, Satoko; Roh, Duk-Gyoo; Oh, Se-Jin; Lee, Sang-Sung; Byun, Do-Young; Kameno, Seiji; Yeom, Jae-Hwan; Jung, Dong-Kyu; Kim, Hyo-Ryoung; Hwang, Ju-Yeon

    2016-10-01

    We present the first VLBI detection of HCN molecular absorption in the nearby active galactic nucleus NGC 1052. Utilizing the 1 mas resolution achieved by the Korean VLBI Network, we have spatially resolved the HCN absorption against a double-sided nuclear jet structure. Two velocity features of HCN absorption are detected significantly at the radial velocity of 1656 and 1719 km s-1, redshifted by 149 and 212 km s-1 with respect to the systemic velocity of the galaxy. The column density of the HCN molecule is estimated to be 1015-1016 cm-2, assuming an excitation temperature of 100-230 K. The absorption features show high optical depth localized on the receding jet side, where the free-free absorption occurred due to the circumnuclear torus. The size of the foreground absorbing molecular gas is estimated to be on approximately one-parsec scales, which agrees well with the approximate size of the circumnuclear torus. HCN absorbing gas is likely to be several clumps smaller than 0.1 pc inside the circumnuclear torus. The redshifted velocities of the HCN absorption features imply that HCN absorbing gas traces ongoing infall motion inside the circumnuclear torus onto the central engine.

  18. Sub-250nm room temperature optical gain from AlGaN materials with strong compositional fluctuations

    NASA Astrophysics Data System (ADS)

    Pecora, Emanuele; Zhang, Wei; Sun, Haiding; Nikiforov, A.; Yin, Jian; Paiella, Roberto; Moustakas, Theodore; Dal Negro, Luca

    2013-03-01

    Compact and portable deep-UV LEDs and laser sources are needed for a number of engineering applications including optical communications, gas sensing, biochemical agent detection, disinfection, biotechnology and medical diagnostics. We investigate the deep-UV optical emission and gain properties of AlxGa1-xN/AlyGa1-yN multiple quantum wells structure. These structures were grown by molecular-beam epitaxy on 6H-SiC substrates resulting in either homogeneous wells or various degrees of band-structure compositional fluctuations in the form of cluster-like features within the wells. We measured the TE-polarized amplified spontaneous emission in the sample with cluster-like features and quantified the optical absorption/gain coefficients and gain spectra by the Variable Stripe Length (VSL) technique under ultrafast optical pumping. We report blue-shift and narrowing of the emission, VSL traces, gain spectra, polarization studies, and the validity of the Schalow-Townes relation to demonstrate a maximum net modal gain of 120 cm-1 at 250 nm in the sample with strong compositional fluctuations. Moreover, we measure a very low gain threshold (15 μJ/cm2) . On the other hand, we found that samples with homogeneous quantum wells lead to absorption only. In addition, we report gain measurements in graded-index-separate-confined heterostructure (GRINSCH) designed to increase the device optical confinement factor.

  19. Eta Carinae’s Declining Outflow Seen in the UV, 2002–2015

    NASA Astrophysics Data System (ADS)

    Davidson, Kris; Ishibashi, Kazunori; Martin, John C.; Humphreys, Roberta M.

    2018-05-01

    Existing Hubble Space Telescope UV data offer many previously neglected clues to η Car’s behavior since 2000. Here we examine a subset of observations with diverse results. (1) The star’s rapid change of state is confirmed by major changes in UV absorption lines, circumstellar extinction, and other features. (2) N III] λ1750 is one of the two most luminous emission features in η Car’s observable spectrum, comparable to Hα. This and other semi-forbidden lines are useful because they have no P Cyg absorption. (3) N III] multiplet ratios provide the first direct diagnostic of gas densities in η Car’s outflow. They strongly suggest that high-excitation lines originate in condensations within the colliding-wind shocked region. The parameters imply that published models have not adequately represented the essential small size scales. (4) In 2002–2004, a very large amount of N III] emission had anomalous Doppler velocities from +400 to +1200 km s‑1. This is a mystery; we conjecture that it may have resulted from a burst of mass ejection in the 2003.5 periastron event. Various other effects are also difficult to explain and merit further investigation. Based on observations made with the NASA/ESA Hubble Space Telescope, which is operated by the Association of Universities for Research in Astronomy, Inc., under NASA contract NAS 5-26555.

  20. Findings on rings and inner satellites of Saturn of Pioneer 11

    NASA Astrophysics Data System (ADS)

    van Allen, J. A.

    1982-09-01

    The introductory part of this paper gives a short account of the theory of absorption by planetary rings and satellites of energetic charged particles that are trapped in a planet's magnetic field and describes the observable consequences of such absorption processes. The previously published University of Iowa observations of absorption features during Pioneer 11's passage through Saturn's inner radiation belt on 1 September 1979 are critically reanalyzed and related to other evidence on rings and satellites inside 2.9 Saturn radii, especially that from the imaging system on Voyagers 1 and 2. It is found (a) that satellites 1979 S1, 1979 S2, and 1980 S3 are almost certainly identical; (b) that the evidence for 1979 S4 is weak to nonexistent; (c) that 1979 S5 and two other nearby absorption features and 1979 S6 and one other nearby absorption feature are probably caused by longitudinal and radial structure of Ring F and not by satellites; and (d) that absorption feature 1979 S3 at 169,200 + or - 600 km is identified with the optically observed Ring G.

  1. Autofluorescence and diffuse reflectance patterns in cervical spectroscopy

    NASA Astrophysics Data System (ADS)

    Marin, Nena Maribel

    Fluorescence and diffuse reflectance spectroscopy are two new optical technologies, which have shown promise to aid in the real time, non-invasive identification of cancers and precancers. Spectral patterns carry a fingerprint of scattering, absorption and fluorescence properties in tissue. Scattering, absorption and fluorescence in tissue are directly affected by biological features that are diagnostically significant, such as nuclear size, micro-vessel density, volume fraction of collagen fibers, tissue oxygenation and cell metabolism. Thus, analysis of spectral patterns can unlock a wealth of information directly related with the onset and progression of disease. Data from a Phase II clinical trial to assess the technical efficacy of fluorescence and diffuse reflectance spectroscopy acquired from 850 women at three clinical locations with two research grade optical devices is calibrated and analyzed. Tools to process and standardize spectra so that data from multiple spectrometers can be combined and analyzed are presented. Methodologies for calibration and quality assurance of optical systems are established to simplify design issues and ensure validity of data for future clinical trials. Empirically based algorithms, using multivariate statistical approaches are applied to spectra and evaluated as a clinical diagnostic tool. Physically based algorithms, using mathematical models of light propagation in tissue are presented. The presented mathematical model combines a diffusion theory in P3 approximation reflectance model and a 2-layer fluorescence model using exponential attenuation and diffusion theory. The resulting adjoint fluorescence and reflectance model extracts twelve optical properties characterizing fluorescence efficiency of cervical epithelium and stroma fluorophores, stromal hemoglobin and collagen absorption, oxygen saturation, and stromal scattering strength and shape. Validations with Monte Carlo simulations show that adjoint model extracted optical properties of the epithelium and the stroma can be estimated accurately. Adjoint model is applied to 926 clinical measurements from 503 patients. Mean values of extracted optical properties have demonstrated to characterize the biological changes associated with dysplastic progression. Finally, penalized logistic regression algorithms are applied to discriminate dysplastic stages in tissue based on extracted optical features. This work provides understandable and interpretable information regarding predictive and generalization ability of optical spectroscopy in neoplastic changes using a minimum subset of optical measurements. Ultimately these methodologies would facilitate the transfer of these optical technologies into clinical practice.

  2. A Compact, Tunable Near-UV Source for Quantitative Microgravity Combustion Diagnostics

    NASA Technical Reports Server (NTRS)

    Peterson, K. A.; Oh, D. B.

    1999-01-01

    There is a need for improved optical diagnostic methods for use in microgravity combustion research. Spectroscopic methods with fast time response that can provide absolute concentrations and concentration profiles of important chemical species in flames are needed to facilitate the understanding of combustion kinetics in microgravity. Although a variety of sophisticated laser-based diagnostics (such as planar laser induced fluorescence, degenerate four wave mixing and coherent Raman methods) have been applied to the study of combustion in laboratory flames, the instrumentation associated with these methods is not well suited to microgravity drop tower or space station platforms. Important attributes of diagnostic systems for such applications include compact size, low power consumption, ruggedness, and reliability. We describe a diode laser-based near-UV source designed with the constraints of microgravity research in mind. Coherent light near 420 nm is generated by frequency doubling in a nonlinear crystal. This light source is single mode with a very narrow bandwidth suitable for gas phase diagnostics, can be tuned over several 1/cm and can be wavelength modulated at up to MHz frequencies. We demonstrate the usefulness of this source for combustion diagnostics by measuring CH radical concentration profiles in an atmospheric pressure laboratory flame. The radical concentrations are measured using wavelength modulation spectroscopy (WMS) to obtain the line-of-sight integrated absorption for different paths through the flame. Laser induced fluorescence (LIF) measurements are also demonstrated with this instrument, showing the feasibility of simultaneous WMS absorption and LIF measurements with the same light source. LIF detection perpendicular to the laser beam can be used to map relative species densities along the line-of-sight while the integrated absorption available through WMS provides a mathematical constraint on the extraction of quantitative information from the LIF data. Combining absorption with LIF - especially if the measurements are made simultaneously with the same excitation beam - may allow elimination of geometrical factors and effects of intensity fluctuations (common difficulties with the analysis of LIF data) from the analysis.

  3. Investigating a physical basis for spectroscopic estimates of leaf nitrogen concentration

    USGS Publications Warehouse

    Kokaly, R.F.

    2001-01-01

    The reflectance spectra of dried and ground plant foliage are examined for changes directly due to increasing nitrogen concentration. A broadening of the 2.1-??m absorption feature is observed as nitrogen concentration increases. The broadening is shown to arise from two absorptions at 2.054 ??m and 2.172 ??m. The wavelength positions of these absorptions coincide with the absorption characteristics of the nitrogen-containing amide bonds in proteins. The observed presence of these absorption features in the reflectance spectra of dried foliage is suggested to form a physical basis for high correlations established by stepwise multiple linear regression techniques between the reflectance of dry plant samples and their nitrogen concentration. The consistent change in the 2.1-??m absorption feature as nitrogen increases and the offset position of protein absorptions compared to those of other plant components together indicate that a generally applicable algorithm may be developed for spectroscopic estimates of nitrogen concentration from the reflectance spectra of dried plant foliage samples. ?? 2001 Published by Elsevier Science Ireland Ltd.

  4. Feature diagnosticity and task context shape activity in human scene-selective cortex.

    PubMed

    Lowe, Matthew X; Gallivan, Jason P; Ferber, Susanne; Cant, Jonathan S

    2016-01-15

    Scenes are constructed from multiple visual features, yet previous research investigating scene processing has often focused on the contributions of single features in isolation. In the real world, features rarely exist independently of one another and likely converge to inform scene identity in unique ways. Here, we utilize fMRI and pattern classification techniques to examine the interactions between task context (i.e., attend to diagnostic global scene features; texture or layout) and high-level scene attributes (content and spatial boundary) to test the novel hypothesis that scene-selective cortex represents multiple visual features, the importance of which varies according to their diagnostic relevance across scene categories and task demands. Our results show for the first time that scene representations are driven by interactions between multiple visual features and high-level scene attributes. Specifically, univariate analysis of scene-selective cortex revealed that task context and feature diagnosticity shape activity differentially across scene categories. Examination using multivariate decoding methods revealed results consistent with univariate findings, but also evidence for an interaction between high-level scene attributes and diagnostic visual features within scene categories. Critically, these findings suggest visual feature representations are not distributed uniformly across scene categories but are shaped by task context and feature diagnosticity. Thus, we propose that scene-selective cortex constructs a flexible representation of the environment by integrating multiple diagnostically relevant visual features, the nature of which varies according to the particular scene being perceived and the goals of the observer. Copyright © 2015 Elsevier Inc. All rights reserved.

  5. How Does the Shape of the Stellar Spectrum Affect the Raman Scattering Features in the Albedo of Exoplanets?

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Oklopčić, Antonija; Hirata, Christopher M.; Heng, Kevin, E-mail: oklopcic@astro.caltech.edu

    The diagnostic potential of the spectral signatures of Raman scattering, imprinted in planetary albedo spectra at short optical wavelengths, has been demonstrated in research on planets in the solar system, and has recently been proposed as a probe of exoplanet atmospheres, complementary to albedo studies at longer wavelengths. Spectral features caused by Raman scattering offer insight into the properties of planetary atmospheres, such as the atmospheric depth, composition, and temperature, as well as the possibility of detecting and spectroscopically identifying spectrally inactive species, such as H{sub 2} and N{sub 2}, in the visible wavelength range. Raman albedo features, however, dependmore » on both the properties of the atmosphere and the shape of the incident stellar spectrum. Identical planetary atmospheres can produce very different albedo spectra depending on the spectral properties of the host star. Here we present a set of geometric albedo spectra calculated for atmospheres with H{sub 2}/He, N{sub 2}, and CO{sub 2} composition, irradiated by different stellar types ranging from late A to late K stars. Prominent albedo features caused by Raman scattering appear at different wavelengths for different types of host stars. We investigate how absorption due to the alkali elements sodium and potassium may affect the intensity of Raman features, and we discuss the preferred strategies for detecting Raman features in future observations.« less

  6. Investigation of in-flame soot optical properties in laminar coflow diffusion flames using thermophoretic particle sampling and spectral light extinction

    NASA Astrophysics Data System (ADS)

    Kempema, Nathan J.; Ma, Bin; Long, Marshall B.

    2016-09-01

    Soot optical properties are essential to the noninvasive study of the in-flame evolution of soot particles since they allow quantitative interpretation of optical diagnostics. Such experimental data are critical for comparison to results from computational models and soot sub-models. In this study, the thermophoretic sampling particle diagnostic (TSPD) technique is applied along with data from a previous spectrally resolved line-of-sight light attenuation experiment to determine the soot volume fraction and absorption function. The TSPD technique is applied in a flame stabilized on the Yale burner, and the soot scattering-to-absorption ratio is calculated using the Rayleigh-Debye-Gans theory for fractal aggregates and morphology information from a previous sampling experiment. The soot absorption function is determined as a function of wavelength and found to be in excellent agreement with previous in-flame measurements of the soot absorption function in coflow laminar diffusion flames. Two-dimensional maps of the soot dispersion exponent are calculated and show that the soot absorption function may have a positive or negative exponential wavelength dependence depending on the in-flame location. Finally, the wavelength dependence of the soot absorption function is related to the ratio of soot absorption functions, as would be found using two-excitation-wavelength laser-induced incandescence.

  7. Flow Property Measurement Using Laser-Induced Fluorescence in the NASA Ames Interaction Heating Facility

    NASA Technical Reports Server (NTRS)

    Grinstead, Jay Henderson; Porter, Barry J.; Carballo, Julio Enrique

    2011-01-01

    The spectroscopic diagnostic technique of two photon absorption laser-induced fluorescence (TALIF) of atomic species has been applied to single-point measurements of velocity and static temperature in the NASA Ames Interaction Heating Facility (IHF) arc jet. Excitation spectra of atomic oxygen and nitrogen were recorded while scanning a tunable dye laser over the absorption feature. Thirty excitation spectra were acquired during 8 arc jet runs at two facility operating conditions; the number of scans per run varied between 2 and 6. Curve fits to the spectra were analyzed to recover their Doppler shifts and widths, from which the flow velocities and static temperatures, respectively, were determined. An increase in the number of independent flow property pairs from each as-measured scan was obtained by extracting multiple lower-resolution scans. The larger population sample size enabled the mean property values and their uncertainties for each run to be characterized with greater confidence. The average plus or minus 2 sigma uncertainties in the mean velocities and temperatures for all 8 runs were plus or minus 1.4% and plus or minus 11%, respectively.

  8. Vitamin B12 among Vegetarians: Status, Assessment and Supplementation.

    PubMed

    Rizzo, Gianluca; Laganà, Antonio Simone; Rapisarda, Agnese Maria Chiara; La Ferrera, Gioacchina Maria Grazia; Buscema, Massimo; Rossetti, Paola; Nigro, Angela; Muscia, Vincenzo; Valenti, Gaetano; Sapia, Fabrizio; Sarpietro, Giuseppe; Zigarelli, Micol; Vitale, Salvatore Giovanni

    2016-11-29

    Cobalamin is an essential molecule for humans. It acts as a cofactor in one-carbon transfers through methylation and molecular rearrangement. These functions take place in fatty acid, amino acid and nucleic acid metabolic pathways. The deficiency of vitamin B12 is clinically manifested in the blood and nervous system where the cobalamin plays a key role in cell replication and in fatty acid metabolism. Hypovitaminosis arises from inadequate absorption, from genetic defects that alter transport through the body, or from inadequate intake as a result of diet. With the growing adoption of vegetarian eating styles in Western countries, there is growing focus on whether diets that exclude animal foods are adequate. Since food availability in these countries is not a problem, and therefore plant foods are sufficiently adequate, the most delicate issue remains the contribution of cobalamin, which is poorly represented in plants. In this review, we will discuss the status of vitamin B12 among vegetarians, the diagnostic markers for the detection of cobalamin deficiency and appropriate sources for sufficient intake, through the description of the features and functions of vitamin B12 and its absorption mechanism.

  9. Zeolites on Mars: Prospects for Remote Sensing

    NASA Technical Reports Server (NTRS)

    Gaffney, E. S.; Singer, R. B.; Kunkle, T. D.

    1985-01-01

    The Martian surface composition measured by Viking can be represented by several combinations of minerals incorporating major fractions of zeolites known to occur in altered mafic rocks and polar soils on Earth. The abundant occurrence of zeolites on Mars is consistent with what is known about both the physical and chemical environment of that planet. The laboratory reflectance spectra (0.65 to 2.55 microns) of a number of relatively pure zeolite minerals and some naturally occurring zeolite-clay soils were measured. All of the spectra measured are dominated by strong absorption near 1.4 and 1.9 microns and a steep reflectance drop longward of about 2.2 microns, all of which are due to abundant H2O. Weaker water overtone bands are also apparent, and in most cases there is spectral evidence for minor Fe(3+). In these features the zeolite spectra are similar to spectra of smectite clays which have abundant interlayer water. The most diagnostic difference between clay and zeolite spectra is the total absence in the zeolites of the weak structural OH absorption.

  10. Identifying dissociative identity disorder: a self-report and projective study.

    PubMed

    Scroppo, J C; Drob, S L; Weinberger, J L; Eagle, P

    1998-05-01

    This study compared 21 female adult psychiatric patients diagnosed with dissociative identity disorder (DID) with 21 female adult nondissociative psychiatric patients to determine whether DID patients exhibit a distinguishing set of clinical features, and perceptual, attentional, and cognitive processes. Participants were assessed with the Dissociative Disorders Interview Schedule to assess diagnostic status. Group scores on the Dissociative Experiences Scale, Tellegen Absorption Scale, Childhood Trauma Questionnaire, Brief Symptom Inventory, and the Rorschach test were compared. DID participants reported earlier and more severe childhood trauma, more dissociative symptoms, and a greater propensity for altered states of consciousness. The DID participants also exhibited increased projective and imaginative activity, a diminished ability to integrate mental contents, a complex and driven cognitive style, and a highly unconventional view of reality.

  11. SPATIALLY RESOLVED HCN ABSORPTION FEATURES IN THE CIRCUMNUCLEAR REGION OF NGC 1052

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Sawada-Satoh, Satoko; Roh, Duk-Gyoo; Oh, Se-Jin

    We present the first VLBI detection of HCN molecular absorption in the nearby active galactic nucleus NGC 1052. Utilizing the 1 mas resolution achieved by the Korean VLBI Network, we have spatially resolved the HCN absorption against a double-sided nuclear jet structure. Two velocity features of HCN absorption are detected significantly at the radial velocity of 1656 and 1719 km s{sup −1}, redshifted by 149 and 212 km s{sup −1} with respect to the systemic velocity of the galaxy. The column density of the HCN molecule is estimated to be 10{sup 15}–10{sup 16} cm{sup −2}, assuming an excitation temperature ofmore » 100–230 K. The absorption features show high optical depth localized on the receding jet side, where the free–free absorption occurred due to the circumnuclear torus. The size of the foreground absorbing molecular gas is estimated to be on approximately one-parsec scales, which agrees well with the approximate size of the circumnuclear torus. HCN absorbing gas is likely to be several clumps smaller than 0.1 pc inside the circumnuclear torus. The redshifted velocities of the HCN absorption features imply that HCN absorbing gas traces ongoing infall motion inside the circumnuclear torus onto the central engine.« less

  12. Multispectral detection of cutaneous lesions using spectroscopy and microscopy approaches

    NASA Astrophysics Data System (ADS)

    Borisova, E.; Genova-Hristova, Ts.; Troyanova, P.; Pavlova, E.; Terziev, I.; Semyachkina-Glushkovskaya, O.; Lomova, M.; Genina, E.; Stanciu, G.; Tranca, D.; Avramov, L.

    2018-02-01

    Autofluorescence, diffuse-reflectance and transmission spectral, and microscopic measurements were made on different cutaneous neoplastic lesions, namely basal cell carcinoma, squamous cell carcinoma, malignant melanoma, and dysplastic and benign lesions related. Spectroscopic measurements were made on ex vivo tissue samples, and confocal microscopy investigations were made on thin tissue slices. Fluorescence spectra obtained reveal statistically significant differences between the different benign, dysplastic and malignant lesions by the level of emission intensity, as well by spectral shape, which are fingerprints applicable for differentiation algorithms. In reflectance mode the most significant differences are related to the influence of skin pigments - melanin and hemoglobin. Transmission spectroscopy mode gave complementary optical properties information about the tissue samples investigated to that one of reflectance and absorption spectroscopy. Using autofluorescence detection of skin lesions we obtain very good diagnostic performance for distinguishing of nonmelanoma lesions. Using diffuse reflectance and transmission spectroscopy we obtain significant tool for pigmented pathologies differentiation, but it is a tool with moderate sensitivity for non-melanoma lesions detection. One could rapidly increase the diagnostic accuracy of the received combined "optical biopsy" method when several spectral detection techniques are applied in common algorithm for lesions' differentiation. Specific spectral features observed in each type of lesion investigated on micro and macro level would be presented and discussed. Correlation between the spectral data received and the microscopic features observed would be discussed in the report.

  13. Hydrated Minerals on Asteroids: The Astronomical Record

    NASA Technical Reports Server (NTRS)

    Rivkin, A. S.; Howell, E. S.; Vilas, F.; Lebofsky, L. A.

    2002-01-01

    Knowledge of the hydrated mineral inventory on the asteroids is important for deducing the origin of Earth's water, interpreting the meteorite record, and unraveling the processes occurring during the earliest times in solar system history. Reflectance spectroscopy shows absorption features in both the 0.6-0.8 and 2.5-3.5 micrometers regions, which are diagnostic of or associated with hydrated minerals. Observations in those regions show that hydrated minerals are common in the mid-asteroid belt, and can be found in unexpected spectral groupings, as well. Asteroid groups formerly associated with mineralogies assumed to have high temperature formation, such as M- and E-class asteroids, have been observed to have hydration features in their reflectance spectra. Some asteroids have apparently been heated to several hundred degrees Celsius, enough to destroy some fraction of their phyllosilicates. Others have rotational variation suggesting that heating was uneven. We summarize this work, and present the astronomical evidence for water- and hydroxyl-bearing minerals on asteroids.

  14. Hydrated Minerals on Asteroids: The Astronomical Record

    NASA Technical Reports Server (NTRS)

    Rivkin, A. S.; Howell, E. S.; Vilas, F.; Lebofsky, L. A.

    2003-01-01

    Knowledge of the hydrated mineral inventory on the asteroids is important for deducing the origin of Earth's water, interpreting the meteorite record, and unraveling the processes occurring during the earliest times in solar system history. Reflectance spectroscopy shows absorption features in both the 0.6-0.8 and 2.5-3.5-micron regions, which are diagnostic of or associated with hydrated minerals. Observations in those regions show that hydrated minerals are common in the mid-asteroid belt, and can be found in unexpected spectral groupings as well. Asteroid groups formerly associated with mineralogies assumed to have high-temperature formation, such as M- and E-class steroids, have been observed to have hydration features in their reflectance spectra. Some asteroids have apparently been heated to several hundred degrees Celsius, enough to destroy some fraction of their phyllosilicates. Others have rotational variation suggesting that heating was uneven. We summarize this work, and present the astronomical evidence for water- and Hydroxl-bearing minerals on asteroids.

  15. Spectral reflectance properties (0.4-2.5 um) of secondary Fe-oxide, Fe-hydroxide, and Fe-sulfate-hydrate minerals associated with sulfide-bearing mine waste

    USGS Publications Warehouse

    Crowley, J.K.; Williams, D.E.; Hammarstrom1, J.M.; Piatak, N.; Mars, J.C.; Chou, I-Ming

    2006-01-01

    Fifteen Fe-oxide, Fe-hydroxide, and Fe-sulphate-hydrate mineral species commonly associated with sulphide bearing mine wastes were characterized by using X-ray powder diffraction and scanning electron microscope methods. Diffuse reflectance spectra of the samples show diagnostic absorption features related to electronic processes involving ferric and/or ferrous iron, and to vibrational processes involving water and hydroxyl ions. Such spectral features enable field and remote sensing based studies of the mineral distributions. Because secondary minerals are sensitive indicators of pH, Eh, relative humidity, and other environmental conditions, spectral mapping of these minerals promises to have important applications to mine waste remediation studies. This report releases digital (ascii) spectra (spectral_data_files.zip) of the fifteen mineral samples to facilitate usage of the data with spectral libraries and spectral analysis software. The spectral data are provided in a two-column format listing wavelength (in micrometers) and reflectance, respectively.

  16. BRIEF REPORT: Beyond Clinical Experience: Features of Data Collection and Interpretation That Contribute to Diagnostic Accuracy

    PubMed Central

    Nendaz, Mathieu R; Gut, Anne M; Perrier, Arnaud; Louis-Simonet, Martine; Blondon-Choa, Katherine; Herrmann, François R; Junod, Alain F; Vu, Nu V

    2006-01-01

    BACKGROUND Clinical experience, features of data collection process, or both, affect diagnostic accuracy, but their respective role is unclear. OBJECTIVE, DESIGN Prospective, observational study, to determine the respective contribution of clinical experience and data collection features to diagnostic accuracy. METHODS Six Internists, 6 second year internal medicine residents, and 6 senior medical students worked up the same 7 cases with a standardized patient. Each encounter was audiotaped and immediately assessed by the subjects who indicated the reasons underlying their data collection. We analyzed the encounters according to diagnostic accuracy, information collected, organ systems explored, diagnoses evaluated, and final decisions made, and we determined predictors of diagnostic accuracy by logistic regression models. RESULTS Several features significantly predicted diagnostic accuracy after correction for clinical experience: early exploration of correct diagnosis (odds ratio [OR] 24.35) or of relevant diagnostic hypotheses (OR 2.22) to frame clinical data collection, larger number of diagnostic hypotheses evaluated (OR 1.08), and collection of relevant clinical data (OR 1.19). CONCLUSION Some features of data collection and interpretation are related to diagnostic accuracy beyond clinical experience and should be explicitly included in clinical training and modeled by clinical teachers. Thoroughness in data collection should not be considered a privileged way to diagnostic success. PMID:17105525

  17. High-sensitivity interference-free diagnostic for measurement of methane in shock tubes

    NASA Astrophysics Data System (ADS)

    Sur, Ritobrata; Wang, Shengkai; Sun, Kai; Davidson, David F.; Jeffries, Jay B.; Hanson, Ronald K.

    2015-05-01

    A sensitive CW laser absorption diagnostic for in-situ measurement of methane mole fraction at high temperatures is developed. The selected transitions for the diagnostic are a cluster of lines near 3148.8 cm-1 from the R-branch of the ν3 band of the CH4 absorption spectrum. The selected transitions have 2-3 times more sensitivity to CH4 concentration than the P-branch in the 3.3 μm region, lower interference from major interfering intermediate species in most hydrocarbon reactions, and applicability over a wide range of pressures and temperatures. Absorption cross-sections for a broad collection of hydrocarbons were simulated to evaluate interference absorption, and were generally found to be negligible near 3148.8 cm-1. However, minor interference from hot bands of C2H2 and C2H4 was observed and was characterized experimentally, revealing a weak dependence on wavelength. To eliminate such interferences, a two-color on-line and off-line measurement scheme is proposed to determine CH4 concentration. The colors selected, i.e., for on-line (3148.81 cm-1) and off-line (3148.66 cm-1), are characterized between 0.2-4 atm and 500 K-2100 K by absorption coefficient measurements in a shock tube. Minimum detectable levels of CH4 in shock tube experiments are reported for this range of temperatures and pressures. An example measurement is shown for sensitive detection of CH4 in a shock tube chemical kinetics experiment.

  18. Iron oxide bands in the visible and near-infrared reflectance spectra of primitive asteroids

    NASA Technical Reports Server (NTRS)

    Jarvis, Kandy S.; Vilas, Faith; Gaffey, Michael J.

    1993-01-01

    High resolution reflectance spectra of primitive asteroids (C, P, and D class and associated subclasses) have commonly revealed an absorption feature centered at 0.7 microns attributed to an Fe(2+)-Fe(3+) charge transfer transition in iron oxides and/or oxidized iron in phyllosilicates. A smaller feature identified at 0.43 microns has been attributed to an Fe(3+) spin-forbidden transition in iron oxides. In the spectra of the two main-belt primitive asteroids 368 Haidea (D) and 877 Walkure (F), weak absorption features which were centered near the location of 0.60-0.65 microns and 0.80-0.90 microns prompted a search for features at these wavelengths and an attempt to identify their origin(s). The CCD reflectance spectra obtained between 1982-1992 were reviewed for similar absorption features located near these wavelengths. The spectra of asteroids in which these absorption features have been identified are shown. These spectra are plotted in order of increasing heliocentric distance. No division of the asteroids by class has been attempted here (although the absence of these features in the anhydrous S-class asteroids, many of which have presumably undergone full heating and differentiation should be noted). For this study, each spectrum was treated as a continuum with discrete absorption features superimposed on it. For each object, a linear least squares fit to the data points defined a simple linear continuum. The linear continuum was then divided into each spectrum, thus removing the sloped continuum and permitting the intercomparison of residual spectral features.

  19. Histological Image Feature Mining Reveals Emergent Diagnostic Properties for Renal Cancer

    PubMed Central

    Kothari, Sonal; Phan, John H.; Young, Andrew N.; Wang, May D.

    2016-01-01

    Computer-aided histological image classification systems are important for making objective and timely cancer diagnostic decisions. These systems use combinations of image features that quantify a variety of image properties. Because researchers tend to validate their diagnostic systems on specific cancer endpoints, it is difficult to predict which image features will perform well given a new cancer endpoint. In this paper, we define a comprehensive set of common image features (consisting of 12 distinct feature subsets) that quantify a variety of image properties. We use a data-mining approach to determine which feature subsets and image properties emerge as part of an “optimal” diagnostic model when applied to specific cancer endpoints. Our goal is to assess the performance of such comprehensive image feature sets for application to a wide variety of diagnostic problems. We perform this study on 12 endpoints including 6 renal tumor subtype endpoints and 6 renal cancer grade endpoints. Keywords-histology, image mining, computer-aided diagnosis PMID:28163980

  20. The origin of absorptive features in the two-dimensional electronic spectra of rhodopsin.

    PubMed

    Farag, Marwa H; Jansen, Thomas L C; Knoester, Jasper

    2018-05-09

    In rhodopsin, the absorption of a photon causes the isomerization of the 11-cis isomer of the retinal chromophore to its all-trans isomer. This isomerization is known to occur through a conical intersection (CI) and the internal conversion through the CI is known to be vibrationally coherent. Recently measured two-dimensional electronic spectra (2DES) showed dramatic absorptive spectral features at early waiting times associated with the transition through the CI. The common two-state two-mode model Hamiltonian was unable to elucidate the origin of these features. To rationalize the source of these features, we employ a three-state three-mode model Hamiltonian where the hydrogen out-of plane (HOOP) mode and a higher-lying electronic state are included. The 2DES of the retinal chromophore in rhodopsin are calculated and compared with the experiment. Our analysis shows that the source of the observed features in the measured 2DES is the excited state absorption to a higher-lying electronic state and not the HOOP mode.

  1. Visible-near infrared spectra of hydrous carbonates, with implications for the detection of carbonates in hyperspectral data of Mars

    NASA Astrophysics Data System (ADS)

    Harner, Patrick L.; Gilmore, Martha S.

    2015-04-01

    We present visible-near infrared (VNIR, 0.35-5 μm) spectra for a suite of hydrous carbonates that may be relevant to the surface of Mars. This includes VNIR spectra for ikaite, nesquehonite, synthetic monohydrocalcite and lansfordite over the 0.35-2.5 μm range that are new to the literature. The spectral features of the hydrous carbonates are dominated by absorptions at ∼1.0, 1.2, 1.4-1.5, 1.9 and 2.8 μm that are due to overtones and combinations of fundamental water and hydroxyl vibrations. Absorptions due to (CO3)2-, Mg-OH, Fe-OH, and/or water are seen at ∼2.3-2.5, 3.4, and 3.9 μm in hydrous Mg and Mg-Fe3+ carbonates containing hydroxyl groups, but are weaker than in the common anhydrous carbonates. When present in the hydrous carbonates, the positions of the centers of the 2.3 μm and/or 2.5 μm absorptions are often shifted relative to the anhydrous carbonates, which may be diagnostic. Some or all of the (CO3)2- absorptions typical of anhydrous carbonates are weak to absent in the hydrous carbonates, and thus this group may be difficult to distinguish from other hydrous minerals like sulfates, phyllosilicates or chlorides in Compact Reconnaissance Imaging Spectrometer for Mars (CRISM) data using standard spectral search parameters for anhydrous carbonates. We present strategies for recognizing hydrous carbonates in CRISM data using combinations of spectral parameters that measure the intensity and shape of the water-related absorptions in these minerals.

  2. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Jatana, Gurneesh; Geckler, Sam; Koeberlein, David

    We designed and developed a 4-probe multiplexed multi-species absorption spectroscopy sensor system for gas property measurements on the intake side of commercial multi-cylinder internal-combustion (I.C.) engines; the resulting cycle- and cylinder-resolved concentration, temperature and pressure measurements are applicable for assessing spatial and temporal variations in the recirculated exhaust gas (EGR) distribution at various locations along the intake gas path, which in turn is relevant to assessing cylinder charge uniformity, control strategies, and CFD models. Furthermore, the diagnostic is based on absorption spectroscopy and includes an H 2O absorption system (utilizing a 1.39 m distributed feedback (DFB) diode laser) for measuringmore » gas temperature, pressure, and H 2O concentration, and a CO 2 absorption system (utilizing a 2.7 m DFB laser) for measuring CO 2 concentration. The various lasers, optical components and detectors were housed in an instrument box, and the 1.39- m and 2.7- m lasers were guided to and from the engine-mounted probes via optical fibers and hollow waveguides, respectively. The 5kHz measurement bandwidth allows for near-crank angle resolved measurements, with a resolution of 1.2 crank angle degrees at 1000 RPM. Our use of compact stainless steel measurement probes enables simultaneous multi-point measurements at various locations on the engine with minimal changes to the base engine hardware; in addition to resolving large-scale spatial variations via simultaneous multi-probe measurements, local spatial gradients can be resolved by translating individual probes. Along with details of various sensor design features and performance, we also demonstrate validation of the spectral parameters of the associated CO 2 absorption transitions using both a multi-pass heated cell and the sensor probes.« less

  3. Capillary waveguide optrodes: an approach to optical sensing in medical diagnostics

    NASA Astrophysics Data System (ADS)

    Lippitsch, Max E.; Draxler, Sonja; Kieslinger, Dietmar; Lehmann, Hartmut; Weigl, Bernhard H.

    1996-07-01

    Glass capillaries with a chemically sensitive coating on the inner surface are used as optical sensors for medical diagnostics. A capillary simultaneously serves as a sample compartment, a sensor element, and an inhomogeneous optical waveguide. Various detection schemes based on absorption, fluorescence intensity, or fluorescence lifetime are described. In absorption-based capillary waveguide optrodes the absorption in the sensor layer is analyte dependent; hence light transmission along the inhomogeneous waveguiding structure formed by the capillary wall and the sensing layer is a function of the analyte concentration. Similarly, in fluorescence-based capillary optrodes the fluorescence intensity or the fluorescence lifetime of an indicator dye fixed in the sensing layer is analyte dependent; thus the specific property of fluorescent light excited in the sensing layer and thereafter guided along the inhomogeneous waveguiding structure is a function of the analyte concentration. Both schemes are experimentally demonstrated, one with carbon dioxide as the analyte and the other one with oxygen. The device combines optical sensors with the standard glass capillaries usually applied to gather blood drops from fingertips, to yield a versatile diagnostic instrument, integrating the sample compartment, the optical sensor, and the light-collecting optics into a single piece. This ensures enhanced sensor performance as well as improved handling compared with other sensors. waveguide, blood gases, medical diagnostics.

  4. UV absorption investigation of ferromagnetically filled ultra-thick carbon onions, carriers of the 217.5 nm Interstellar Absorption Feature

    NASA Astrophysics Data System (ADS)

    Boi, Filippo S.; Zhang, Xiaotian; Ivaturi, Sameera; Liu, Qianyang; Wen, Jiqiu; Wang, Shanling

    2017-12-01

    Carbon nano-onions (CNOs) are fullerene-like structures which consist of quasi-spherical closed carbon shells. These structures have become a subject of great interest thanks to their characteristic absorption feature of interstellar origin (at 217.5 nm, 4.6 μm-1). An additional extinction peak at 3.8 μm-1 has also been reported and attributed to absorption by graphitic residues between the as-grown CNOs. Here, we report the ultraviolet absorption properties of ultra-thick CNOs filled with FePt3 crystals, which also exhibit two main absorption peaks—features located at 4.58 μm-1 and 3.44 μm-1. The presence of this additional feature is surprising and is attributed to nonmagnetic graphite flakes produced as a by-product in the pyrolysis experiment (as confirmed by magnetic separation methods). Instead, the feature at 4.58 μm-1 is associated with the π-plasmonic resonance of the CNOs structures. The FePt3 filled CNOs were fabricated in situ by an advanced one-step fast process consisting in the direct sublimation and pyrolysis of two molecular precursors, namely, ferrocene and dichloro-cyclooctadiene-platinum in a chemical vapour deposition system. The morphological, structural, and magnetic properties of the as-grown filled CNOs were characterized by a means of scanning and transmission electron microscopy, X-ray diffraction, and magnetometry.

  5. The hot DOA1 degenerate HZ 21 - A search for circumstellar/photospheric metals and peculiar absorption at He II

    NASA Technical Reports Server (NTRS)

    Fritz, M. L.; Leckenby, H.; Sion, E. M.; Vauclair, G.; Liebert, J.

    1990-01-01

    A high-resolution IUE spectrum of the hot DO1 degenerate HZ 21 was obtained by combining US1 + European 2 low-background observing shifts. The SWP image reveals a rich spectrum of interstellar absorption lines with an average velocity in the line of sight to HZ 21 of -30 km/s. However, there is no clear evidence of any highly or lowly ionized metal features which could be attributed to circumstellar, wind, or photospheric absorption. There is, however, a broad absorption trough at He II (1640) which was not unexpected, given the clear presence of He II (4686) absorption in this star's optical spectrum. The velocity width of He II (1640) appears consistent with photospheric absorption wings which appear to flank the geocoronal Ly-alpha emission feature. The He II (1640) feature reveals what appears to be a broad (310 km/s) emission reversal. Evidence is provided that the emission reversal is probably real.

  6. Investigating the Formation of Mars Recurring Slope Lineae through Laboratory Experiments

    NASA Astrophysics Data System (ADS)

    Cantillo, D. C.; Hibbitts, C.; Wing, B. R.; Mushkin, A.; Stockstill-Cahill, K.; Viviano-Beck, C. E.

    2017-12-01

    The presence of low-albedo streaks on crater slopes, Recurring Slope Lineae (RSLs), may be evidence for present-day intermittent and repeated flow of water or brine on the surface of Mars. RSLs grow, fade, and can grow again seasonally as surface temperatures change [e.g. 1,2]. Although distinguishable by being darker than the surrounding terrain, they have no diagnostic absorption features [3] with the exception of a ferric feature that may be related to grain size [4] and the notable discovery of hydrated perchlorates at the base of one set of RSLs [5]. To explore liquid-based hypotheses for the formation of RSLs, we have constructed an environmental chamber that can simulate Martian surface conditions. The development of this chamber follows upon the successful completion of preliminary tests under a terrestrial atmosphere [6] to prove the optical design and subsequently under Mars pressure to verify the technical approach [7]. The Mars Analog Reflectance Spectroscopy (MARS) chamber is capable of exposing soils to brines from underneath, simulating possible subsurface wetting that could result in RSL formation. While maintaining Mars pressure and similar oxygen fugacity, the chamber will also allow the collection of spectra from 0.4 to 2.4 microns. Various brine compositions can be investigated, including solutions of iron chlorides. These unique salts can lower the soil albedo without inducing a spectral absorption feature, whereas other salts brighten the surface after drying or retain significant water [8]. Another possible darkening mechanism is also being explored within the MARS chamber. Experiments have shown that evaporation of liquid from palagonitic soils under Mars pressure create ubiquitous grain scale cavities within the surface [7]. This micro-roughness increases shadowing and darkens the surface, indicating it may be a process of darkening that is independent of brine composition.

  7. Search for Feo and Pyroxene on MERCURY?S Surface

    NASA Astrophysics Data System (ADS)

    Sprague, Ann L.; Emery, Joshua P.

    Results from spectral observations of Mercury's surface in the wavelength range 0.8 to 5.5 micrometers will be reported. The data were obtained at the NASA Infrared Telescope Facility on Mauna Kea Hawaii. We used SpeX a long slit imaging system developed at the IRTF for high resolving power spatially resolved spectroscopy throughout the solar system. We aligned the spectral slit with Mercury's geographic longitude and systematically moved it across the Earth-facing disk to obtain multiple disk-resolved spectral images. The entire data set provides spatial coverage of the Earth-facing disk limited only by atmospheric turbulence and the diffraction limit for each wavelength. We used SpeX in two spectral regions in the R 2000 mode. In the first case between 0.8 and 2.5 micrometer to search for the 0.9 to 1.0 micrometer reflectance absorption feature caused by the Fe2+ electronic transfer in FeO. We also measured the 4.5 to 5.5 micrometer flux from Mercury. This is a region of diagnostic features caused by the presence of volume scattering in pyroxene and olivine. These data will be compared to previous observations that showed an anomalous emission feature at 5.5 micrometer and to others that exhibited a feature closely resembling that from pyroxene.

  8. IUE's View of Callisto: Detection of an SO2 Absorption Correlated to Possible Torus Neutral Wind Alterations

    NASA Technical Reports Server (NTRS)

    Lane, Arthur L.; Domingue, Deborah L.

    1997-01-01

    Observations taken with the International Ultraviolet Explorer (IUE) detected a 0.28 micron absorption feature on Callisto's leading and Jupiter-facing hemispheres. This feature is similar to Europa's 0.28 micron feature, however it shows no correlation with magnetospheric ion bombardment. The strongest 0.28 micron signature is seen in the region containing the Valhalla impact. This absorption feature also shows some spatial correlation to possible neutral wind interactions, suggestive of S implantation (rather than S(sub x)) into Callisto's water ice surface, Indications of possible temporal variations (on the 10% level) are seen at other wavelengths between the 1984-1986 and the 1996 observations.

  9. Evaluation of Fourier transform coefficients for the diagnosis of rheumatoid arthritis from diffuse optical tomography images

    NASA Astrophysics Data System (ADS)

    Montejo, Ludguier D.; Jia, Jingfei; Kim, Hyun K.; Hielscher, Andreas H.

    2013-03-01

    We apply the Fourier Transform to absorption and scattering coefficient images of proximal interphalangeal (PIP) joints and evaluate the performance of these coefficients as classifiers using receiver operator characteristic (ROC) curve analysis. We find 25 features that yield a Youden index over 0.7, 3 features that yield a Youden index over 0.8, and 1 feature that yields a Youden index over 0.9 (90.0% sensitivity and 100% specificity). In general, scattering coefficient images yield better one-dimensional classifiers compared to absorption coefficient images. Using features derived from scattering coefficient images we obtain an average Youden index of 0.58 +/- 0.16, and an average Youden index of 0.45 +/- 0.15 when using features from absorption coefficient images.

  10. Quantum Cascade Laser Absorption Spectroscopy as a Plasma Diagnostic Tool: An Overview

    PubMed Central

    Welzel, Stefan; Hempel, Frank; Hübner, Marko; Lang, Norbert; Davies, Paul B.; Röpcke, Jürgen

    2010-01-01

    The recent availability of thermoelectrically cooled pulsed and continuous wave quantum and inter-band cascade lasers in the mid-infrared spectral region has led to significant improvements and new developments in chemical sensing techniques using in-situ laser absorption spectroscopy for plasma diagnostic purposes. The aim of this article is therefore two-fold: (i) to summarize the challenges which arise in the application of quantum cascade lasers in such environments, and, (ii) to provide an overview of recent spectroscopic results (encompassing cavity enhanced methods) obtained in different kinds of plasma used in both research and industry. PMID:22163581

  11. Quantum cascade laser absorption spectroscopy as a plasma diagnostic tool: an overview.

    PubMed

    Welzel, Stefan; Hempel, Frank; Hübner, Marko; Lang, Norbert; Davies, Paul B; Röpcke, Jürgen

    2010-01-01

    The recent availability of thermoelectrically cooled pulsed and continuous wave quantum and inter-band cascade lasers in the mid-infrared spectral region has led to significant improvements and new developments in chemical sensing techniques using in-situ laser absorption spectroscopy for plasma diagnostic purposes. The aim of this article is therefore two-fold: (i) to summarize the challenges which arise in the application of quantum cascade lasers in such environments, and, (ii) to provide an overview of recent spectroscopic results (encompassing cavity enhanced methods) obtained in different kinds of plasma used in both research and industry.

  12. Reflectance spectroscopy (0.35-8 μm) of ammonium-bearing minerals and qualitative comparison to Ceres-like asteroids

    NASA Astrophysics Data System (ADS)

    Berg, Breanne L.; Cloutis, Edward A.; Beck, Pierre; Vernazza, Pierre; Bishop, Janice L.; Takir, Driss; Reddy, Vishnu; Applin, Daniel; Mann, Paul

    2016-02-01

    Ammonium-bearing minerals have been suggested to be present on Mars, Ceres, and various asteroids and comets. We undertook a systematic study of the spectral reflectance properties of ammonium-bearing minerals and compounds that have possible planetary relevance (i.e., ammonium carbonates, chlorides, nitrates, oxalates, phosphates, silicates, and sulfates). Various synthetic and natural NH4+-bearing minerals were analyzed using reflectance spectroscopy in the long-wave ultraviolet, visible, near-infrared, and mid-infrared regions (0.35-8 μm) in order to identify spectral features characteristic of the NH4+ molecule, and to evaluate if and how these features vary among different species. Mineral phases were confirmed through structural and compositional analyses using X-ray diffraction, X-ray fluorescence, and elemental combustion analysis. Characteristic absorption features associated with NH4 can be seen in the reflectance spectra at wavelengths as short as ∼1 μm. In the near-infrared region, the most prominent absorption bands are located near 1.6, 2.0, and 2.2 μm. Absorption features characteristic of NH4+ occurred at slightly longer wavelengths in the mineral-bound NH4+ spectra than for free NH4+ for most of the samples. Differences in wavelength position are attributable to various factors, including differences in the type and polarizability of the anion(s) attached to the NH4+, degree and type of hydrogen bonding, molecule symmetry, and cation substitutions. Multiple absorption features, usually three absorption bands, in the mid-infrared region between ∼2.8 and 3.8 μm were seen in all but the most NH4-poor sample spectra, and are attributed to fundamentals, combinations, and overtones of stretching and bending vibrations of the NH4+ molecule. These features appear even in reflectance spectra of water-rich samples which exhibit a strong 3 μm region water absorption feature. While many of the samples examined in this study have NH4 absorption bands at unique wavelength positions, in order to discriminate between different NH4+-bearing phases, absorption features corresponding to molecules other than NH4+ should be included in spectral analysis. A qualitative comparison of the laboratory results to telescopic spectra of Asteroids 1 Ceres, 10 Hygiea, and 324 Bamberga for the 3 μm region demonstrates that a number of NH4-bearing phases are consistent with the observational data in terms of exhibiting an absorption band in the 3.07 μm region.

  13. Reflectance spectroscopy (0.35–8 μm) of ammonium-bearing minerals and qualitative comparison to Ceres-like asteroids

    USGS Publications Warehouse

    Berg, Breanne L.; Cloutis, Edward A.; Beck, P.; Vernazza, P.; Bishop, Janice L; Takir, Driss; Reddy, V.; Applin, D.; Mann, Paul

    2016-01-01

    Ammonium-bearing minerals have been suggested to be present on Mars, Ceres, and various asteroids and comets. We undertook a systematic study of the spectral reflectance properties of ammonium-bearing minerals and compounds that have possible planetary relevance (i.e., ammonium carbonates, chlorides, nitrates, oxalates, phosphates, silicates, and sulfates). Various synthetic and natural NH4+-bearing minerals were analyzed using reflectance spectroscopy in the long-wave ultraviolet, visible, near-infrared, and mid-infrared regions (0.35–8 μm) in order to identify spectral features characteristic of the NH4+ molecule, and to evaluate if and how these features vary among different species. Mineral phases were confirmed through structural and compositional analyses using X-ray diffraction, X-ray fluorescence, and elemental combustion analysis. Characteristic absorption features associated with NH4 can be seen in the reflectance spectra at wavelengths as short as ∼1 μm. In the near-infrared region, the most prominent absorption bands are located near 1.6, 2.0, and 2.2 μm. Absorption features characteristic of NH4+ occurred at slightly longer wavelengths in the mineral-bound NH4+ spectra than for free NH4+ for most of the samples. Differences in wavelength position are attributable to various factors, including differences in the type and polarizability of the anion(s) attached to the NH4+, degree and type of hydrogen bonding, molecule symmetry, and cation substitutions. Multiple absorption features, usually three absorption bands, in the mid-infrared region between ∼2.8 and 3.8 μm were seen in all but the most NH4-poor sample spectra, and are attributed to fundamentals, combinations, and overtones of stretching and bending vibrations of the NH4+ molecule. These features appear even in reflectance spectra of water-rich samples which exhibit a strong 3 μm region water absorption feature. While many of the samples examined in this study have NH4 absorption bands at unique wavelength positions, in order to discriminate between different NH4+-bearing phases, absorption features corresponding to molecules other than NH4+ should be included in spectral analysis. A qualitative comparison of the laboratory results to telescopic spectra of Asteroids 1 Ceres, 10 Hygiea, and 324 Bamberga for the 3 μm region demonstrates that a number of NH4-bearing phases are consistent with the observational data in terms of exhibiting an absorption band in the 3.07 μm region.

  14. Terahertz in-line digital holography of human hepatocellular carcinoma tissue.

    PubMed

    Rong, Lu; Latychevskaia, Tatiana; Chen, Chunhai; Wang, Dayong; Yu, Zhengping; Zhou, Xun; Li, Zeyu; Huang, Haochong; Wang, Yunxin; Zhou, Zhou

    2015-02-13

    Terahertz waves provide a better contrast in imaging soft biomedical tissues than X-rays, and unlike X-rays, they cause no ionisation damage, making them a good option for biomedical imaging. Terahertz absorption imaging has conventionally been used for cancer diagnosis. However, the absorption properties of a cancerous sample are influenced by two opposing factors: an increase in absorption due to a higher degree of hydration and a decrease in absorption due to structural changes. It is therefore difficult to diagnose cancer from an absorption image. Phase imaging can thus be critical for diagnostics. We demonstrate imaging of the absorption and phase-shift distributions of 3.2 mm × 2.3 mm × 30-μm-thick human hepatocellular carcinoma tissue by continuous-wave terahertz digital in-line holography. The acquisition time of a few seconds for a single in-line hologram is much shorter than that of other terahertz diagnostic techniques, and future detectors will allow acquisition of meaningful holograms without sample dehydration. The resolution of the reconstructions was enhanced by sub-pixel shifting and extrapolation. Another advantage of this technique is its relaxed minimal sample size limitation. The fibrosis indicated in the phase distribution demonstrates the potential of terahertz holographic imaging to obtain a more objective, early diagnosis of cancer.

  15. Terahertz in-line digital holography of human hepatocellular carcinoma tissue

    PubMed Central

    Rong, Lu; Latychevskaia, Tatiana; Chen, Chunhai; Wang, Dayong; Yu, Zhengping; Zhou, Xun; Li, Zeyu; Huang, Haochong; Wang, Yunxin; Zhou, Zhou

    2015-01-01

    Terahertz waves provide a better contrast in imaging soft biomedical tissues than X-rays, and unlike X-rays, they cause no ionisation damage, making them a good option for biomedical imaging. Terahertz absorption imaging has conventionally been used for cancer diagnosis. However, the absorption properties of a cancerous sample are influenced by two opposing factors: an increase in absorption due to a higher degree of hydration and a decrease in absorption due to structural changes. It is therefore difficult to diagnose cancer from an absorption image. Phase imaging can thus be critical for diagnostics. We demonstrate imaging of the absorption and phase-shift distributions of 3.2 mm × 2.3 mm × 30-μm-thick human hepatocellular carcinoma tissue by continuous-wave terahertz digital in-line holography. The acquisition time of a few seconds for a single in-line hologram is much shorter than that of other terahertz diagnostic techniques, and future detectors will allow acquisition of meaningful holograms without sample dehydration. The resolution of the reconstructions was enhanced by sub-pixel shifting and extrapolation. Another advantage of this technique is its relaxed minimal sample size limitation. The fibrosis indicated in the phase distribution demonstrates the potential of terahertz holographic imaging to obtain a more objective, early diagnosis of cancer. PMID:25676705

  16. Terahertz in-line digital holography of human hepatocellular carcinoma tissue

    NASA Astrophysics Data System (ADS)

    Rong, Lu; Latychevskaia, Tatiana; Chen, Chunhai; Wang, Dayong; Yu, Zhengping; Zhou, Xun; Li, Zeyu; Huang, Haochong; Wang, Yunxin; Zhou, Zhou

    2015-02-01

    Terahertz waves provide a better contrast in imaging soft biomedical tissues than X-rays, and unlike X-rays, they cause no ionisation damage, making them a good option for biomedical imaging. Terahertz absorption imaging has conventionally been used for cancer diagnosis. However, the absorption properties of a cancerous sample are influenced by two opposing factors: an increase in absorption due to a higher degree of hydration and a decrease in absorption due to structural changes. It is therefore difficult to diagnose cancer from an absorption image. Phase imaging can thus be critical for diagnostics. We demonstrate imaging of the absorption and phase-shift distributions of 3.2 mm × 2.3 mm × 30-μm-thick human hepatocellular carcinoma tissue by continuous-wave terahertz digital in-line holography. The acquisition time of a few seconds for a single in-line hologram is much shorter than that of other terahertz diagnostic techniques, and future detectors will allow acquisition of meaningful holograms without sample dehydration. The resolution of the reconstructions was enhanced by sub-pixel shifting and extrapolation. Another advantage of this technique is its relaxed minimal sample size limitation. The fibrosis indicated in the phase distribution demonstrates the potential of terahertz holographic imaging to obtain a more objective, early diagnosis of cancer.

  17. [Analysis of UV-visible absorption spectrum on the decolorization of industrial wastewater by disinfection].

    PubMed

    Huang, Xin; Wang, Long-Yong; Gao, Nai-Yun; Li, Wei-Guo

    2012-10-01

    The UV-Visible absorption spectrum of industrial wastewater was explored to introduce a substituting method determining the color of water, and to compare the decolorization efficacy of different disinfectants. The results show that the visible absorption spectrum(350-600 nm), instead of ultraviolet absorption spectrum, should be applied to characterize the color of wastewater. There is a good correlation between the features of visible absorption spectrum and the true color of wastewater. Both ozone and chlorine dioxide has a better decolorization performance than chlorine. However, the color of chlorine dioxide itself has a negative effect on decolorization. The changes in the features of visible absorption spectrum effectively reflect the variations in the color of wastewater after disinfection.

  18. Detection of absorption lines in the spectra of X-ray bursts from X1608-52

    NASA Astrophysics Data System (ADS)

    Nakamura, Norio; Inoue, Hajime; Tanaka, Yasuo

    X-ray bursts from X 1608-52 were observed with the gas scintillation proportional counters on the Tenma satellite. Absorption features were detected in the spectra of three bursts among 17 bursts observed. These absorption features are consistent with a common absorption line at 4.1 keV. The energy and the properties of the absorption lines of the X 1608-52 bursts are very similar to those observed from the X 1636-53 bursts by Waki et al. (1984). Near equality of the absorption-line energies for X 1636-53 and X 1608-52 would imply that mass and radius of the neutron stars in these two systems are very similar to each other.

  19. Outcomes of Diagnostic Exome Sequencing in Patients With Diagnosed or Suspected Autism Spectrum Disorders.

    PubMed

    Rossi, Mari; El-Khechen, Dima; Black, Mary Helen; Farwell Hagman, Kelly D; Tang, Sha; Powis, Zöe

    2017-05-01

    Exome sequencing has recently been proved to be a successful diagnostic method for complex neurodevelopmental disorders. However, the diagnostic yield of exome sequencing for autism spectrum disorders has not been extensively evaluated in large cohorts to date. We performed diagnostic exome sequencing in a cohort of 163 individuals with autism spectrum disorder (66.3%) or autistic features (33.7%). The diagnostic yield observed in patients in our cohort was 25.8% (42 of 163) for positive or likely positive findings in characterized disease genes, while a candidate genetic etiology was reported for an additional 3.3% (4 of 120) of patients. Among the positive findings in the patients with autism spectrum disorder or autistic features, 61.9% were the result of de novo mutations. Patients presenting with psychiatric conditions or ataxia or paraplegia in addition to autism spectrum disorder or autistic features were significantly more likely to receive positive results compared with patients without these clinical features (95.6% vs 27.1%, P < 0.0001; 83.3% vs 21.2%, P < 0.0001, respectively). The majority of the positive findings were in recently identified autism spectrum disorder genes, supporting the importance of diagnostic exome sequencing for patients with autism spectrum disorder or autistic features as the causative genes might evade traditional sequential or panel testing. These results suggest that diagnostic exome sequencing would be an efficient primary diagnostic method for patients with autism spectrum disorders or autistic features. Moreover, our data may aid clinicians to better determine which subset of patients with autism spectrum disorder with additional clinical features would benefit the most from diagnostic exome sequencing. Copyright © 2017 The Authors. Published by Elsevier Inc. All rights reserved.

  20. Diagnosis and management of clinical and subclinical cobalamin deficiencies: why controversies persist in the age of sensitive metabolic testing.

    PubMed

    Carmel, Ralph

    2013-05-01

    In the past two decades, sensitive biochemical tests have uncovered cobalamin deficiency much more frequently than ever before. Almost all cases involve mild, biochemical changes without clinical manifestations (subclinical cobalamin deficiency; SCCD), whose health impact is unclear. Because the causes of SCCD are most often unknown, nonmalabsorptive, and seldom documented, controversy and confusion surround the diagnostic criteria and, inevitably, consequences and management of SCCD. To complicate matters, our grasp of the rarer clinical deficiency, usually a serious, progressive medical disease rooted in severe malabsorption, has receded as absorption testing has disappeared. Reexamining the accumulation of assumptions and misperceptions about cobalamin deficiency and distinguishing SCCD from clinical deficiency is long overdue. The biology of cobalamin provides an important starting point: cobalamin stores exceed daily losses so greatly and binding proteins regulate absorption so effectively that deficiency typically achieves clinical expression only after years of severe, relentless malabsorption. Dietary insufficiency, mild, partial malabsorption, and other incomplete, intermittent causes can usually produce only SCCD. Thus, the most fundamental difference between the two deficiencies is the relentlessness of the underlying cause, which determines prognosis and health impact. Inattention to absorptive status has exacerbated the limitations of biochemical testing. All the biochemical tests are highly sensitive but specificity is poor, no diagnostic gold standard exists, and diagnostic cutpoints fluctuate excessively. To limit the adverse diagnostic consequences, the diagnosis of SCCD, whose need for treatment is unclear, should be deferred unless at least two tests are abnormal. Indeed, cobalamin biology indicates that the absorption system, while enhancing cobalamin delivery, also sets a strict upper limit on it, which suggests that cobalamin excess is undesirable. Solving cobalamin deficiency requires balanced assessment of the different imperatives of clinical and public health concerns, better rationalization of diagnostic testing, consistent definitions of normality in relation to SCCD, and rational cutpoint selection. Copyright © 2013 Elsevier Masson SAS. All rights reserved.

  1. Combined infrared and ultraviolet-visible spectroscopy matrix-isolated carbon vapor

    NASA Technical Reports Server (NTRS)

    Kurtz, Joe; Huffman, Donald R.

    1990-01-01

    Infrared and UV-visible absorption spectra have been measured on the same sample of matrix-isolated carbon vapor in order to establish correlations between absorption intensities of vibrational and electronic transitions as a function of sample annealing. A high degree of correlation has been found between the IR feature at 1998/cm recently assigned to C8 and a UV absorption feature at about 3100 A. Thus, for the first time, direct evidence is given for the assignment of one of the unknown UV-visible features of the long-studied matrix-isolated carbon vapor spectrum.

  2. Design and development of a probe-based multiplexed multi-species absorption spectroscopy sensor for characterizing transient gas-parameter distributions in the intake systems of I.C. engines

    DOE PAGES

    Jatana, Gurneesh; Geckler, Sam; Koeberlein, David; ...

    2016-09-01

    We designed and developed a 4-probe multiplexed multi-species absorption spectroscopy sensor system for gas property measurements on the intake side of commercial multi-cylinder internal-combustion (I.C.) engines; the resulting cycle- and cylinder-resolved concentration, temperature and pressure measurements are applicable for assessing spatial and temporal variations in the recirculated exhaust gas (EGR) distribution at various locations along the intake gas path, which in turn is relevant to assessing cylinder charge uniformity, control strategies, and CFD models. Furthermore, the diagnostic is based on absorption spectroscopy and includes an H 2O absorption system (utilizing a 1.39 m distributed feedback (DFB) diode laser) for measuringmore » gas temperature, pressure, and H 2O concentration, and a CO 2 absorption system (utilizing a 2.7 m DFB laser) for measuring CO 2 concentration. The various lasers, optical components and detectors were housed in an instrument box, and the 1.39- m and 2.7- m lasers were guided to and from the engine-mounted probes via optical fibers and hollow waveguides, respectively. The 5kHz measurement bandwidth allows for near-crank angle resolved measurements, with a resolution of 1.2 crank angle degrees at 1000 RPM. Our use of compact stainless steel measurement probes enables simultaneous multi-point measurements at various locations on the engine with minimal changes to the base engine hardware; in addition to resolving large-scale spatial variations via simultaneous multi-probe measurements, local spatial gradients can be resolved by translating individual probes. Along with details of various sensor design features and performance, we also demonstrate validation of the spectral parameters of the associated CO 2 absorption transitions using both a multi-pass heated cell and the sensor probes.« less

  3. Near-infrared spectra of the Martian surface: Reading between the lines

    NASA Technical Reports Server (NTRS)

    Crisp, D.; Bell, J. F., III

    1993-01-01

    Moderate-resolution near-infrared (NIR) spectra of Mars have been widely used in studies of the Martian surface because many candidate surface materials have distinctive absorption features at these wavelengths. Recent advances in NIR detector technology and instrumentation have also encouraged studies in this spectral region. The use of moderate spectral resolution has often been justified for NIR surface observations because the spectral features produced by most surface materials are relatively broad, and easily discriminated at this resolution. In spite of this, NIR spectra of Mars are usually very difficult to interpret quantitatively. One problem is that NIR surface absorption features are often only a few percent deep, requiring observations with great signal-to-noise ratios. A more significant problem is that gases in the Martian atmosphere contribute numerous absorption features at these wavelengths. Ground-based observers must also contend with variable absorption by several gases in the Earth's atmosphere (H2O, CO2, O3, N2O, CH4, O2). The strong CO2 bands near 1.4, 1.6, 2.0, 2.7, 4.3, and 4.8 micrometers largely preclude the analysis of surface spectral features at these wavelengths. Martian atmospheric water vapor also contributes significant absorption near 1.33, 1.88, and 2.7 micrometers, but water vapor in the Earth's atmosphere poses a much larger problem to ground-based studies of these spectral regions. The third most important NIR absorber in the Martian atmosphere is CO. This gas absorbs most strongly in the relatively-transparent spectral windows near 4.6 and 2.3 micrometers. It also produces 1-10 percent absorption in the solar spectrum at these NIR wavelengths. This solar CO absorption cannot be adequately removed by dividing the Martian spectrum by that of a star, as is commonly done to calibrate ground-based spectroscopic observations, because most stars do not have identical amounts of CO absorption in their spectra. Here, we describe tow effective methods for eliminating contamination of Martian surface spectra by absorption in the solar, terrestrial, and Martian atmospheres. Both methods involve the use of very-high-resolution spectra that completely resolve the narrow atmospheric absorption lines.

  4. X-ray absorption of a warm dense aluminum plasma created by an ultra-short laser pulse

    NASA Astrophysics Data System (ADS)

    Lecherbourg, L.; Renaudin, P.; Bastiani-Ceccotti, S.; Geindre, J.-P.; Blancard, C.; Cossé, P.; Faussurier, G.; Shepherd, R.; Audebert, P.

    2007-05-01

    Point-projection K-shell absorption spectroscopy has been used to measure absorption spectra of transient aluminum plasma created by an ultra-short laser pulse. The 1s-2p and 1s-3p absorption lines of weakly ionized aluminum were measured for an extended range of densities in a low-temperature regime. Independent plasma characterization was obtained using frequency domain interferometry diagnostic (FDI) that allows the interpretation of the absorption spectra in terms of spectral opacities. A detailed opacity code using the density and temperature inferred from the FDI reproduce the measured absorption spectra except in the last stage of the recombination phase.

  5. Light-induced autofluorescence and diffuse reflectance spectroscopy in clinical diagnosis of skin cancer

    NASA Astrophysics Data System (ADS)

    Borisova, E.; Pavlova, E.; Kundurjiev, T.; Troyanova, P.; Genova, Ts.; Avramov, L.

    2014-05-01

    We investigated more than 500 clinical cases to receive the spectral properties of basal cell (136 patients) and squamous cell carcinoma (28), malignant melanoma (41) and different cutaneous dysplastic and benign cutaneous lesions. Excitation at 365, 385 and 405 nm using LEDs sources is applied to obtain autofluorescence spectra, and broad-band illumination in the region of 400-900 nm is used to detect diffuse reflectance spectra of all pathologies investigated. USB4000 microspectrometer (Ocean Optics Inc, USA) is applied as a detector and fiber-optic probe is used for delivery of the light. In the case of in vivo tumor measurements spectral shape and intensity changes are observed that are specific for a given type of lesion. Autofluorescence origins of the signals coming from skin tissues are mainly due to proteins, such as collagen, elastin, keratin, their cross-links, co-enzimes - NADH and flavins and endogenous porphyrins. Spectral features significant into diffuse spectroscopy diagnosis are related to the effects of re-absorption of hemoglobin and its forms, as well as melanin and its concentration in different pathologies. We developed significant database and revealed specific features for a large class of cutaneous neoplasia, using about 30 different spectral peculiarities to differentiate cutaneous tumors. Sensitivity and specificity obtained exceed 90%, which make optical biopsy very useful tool for clinical practice. These results are obtained in the frames of clinical investigations for development of significant "spectral features" database for the most common cutaneous malignant, dysplastic and benign lesions. In the forthcoming plans, our group tries to optimize the existing experimental system for optical biopsy of skin, and to introduce it and the diagnostic algorithms developed into clinical practice, based on the high diagnostic accuracy achieved.

  6. Simultaneous infrared and UV-visible absorption spectra of matrix-isolated carbon vapor

    NASA Technical Reports Server (NTRS)

    Kurtz, Joe; Huffman, Donald R.

    1989-01-01

    Carbon molecules were suggested as possible carriers of the diffuse interstellar bands. In particular, it was proposed that the 443 nm diffuse interstellar band is due to the same molecule which gives rise to the 447 nm absorption feature in argon matrix-isolated carbon vapor. If so, then an associated C-C stretching mode should be seen in the IR. By doing spectroscopy in both the IR and UV-visible regions on the same sample, the present work provides evidence for correlating UV-visible absorption features with those found in the IR. Early data indicates no correlation between the strongest IR feature (1997/cm) and the 447 nm band. Correlation with weaker IR features is being investigated.

  7. Infrared Detection of Evidence for Microscopic Organisms on Europa

    NASA Astrophysics Data System (ADS)

    Dalton, J. B.; Mogul, R.

    2002-12-01

    The infrared detection of evidence for microorganisms on surfaces of icy satellites requires four conditions: (1) the emplacement of microorganisms at the surface, (2) the survival of biotic material in the hostile conditions of space, (3) that the biotic material exhibit diagnostic infrared absorption features and (4) spectra with sufficient resolution and signal-to-noise ratios. This paper will focus on each topic with respect to cryogenic data recently collected on model microorganisms. Several studies suggest that materials from a Europan interior ocean have been emplaced in disrupted regions[1-10]. If the Europan ocean at one time contained Life and its associated biomolecules, then it is possible that surface materials may still harbor some remnant of these structures. Such remnant material must be capable of surviving the low pressure, low temperature and high radiation environment. The terrestrial extremophile Deinococcus radiodurans has been found viable after exposure both to vacuum at temperatures as low as 80 K [11] and to 60 Gy/h of radiation[12]. The chemical degradation of D. radiodurans has also been shown to be dependent on plasma composition (O2 {>>} CO2)[13]. Hence, it is reasonable to assume that some degree of sterilization and degradation would be occurring at the surface of Europa. However, given the sputtering rate at Europa of approximately a few cm every few million years [14], it is possible that fresh material may be continually exposed from depths to which little radiation penetrates. Remote sensing of the surface, therefore, would not be dependent on the survival of the microorganism but on the endurance of the particular biomolecules that give rise to the spectral signature. This endurance is not unreasonable since previous studies have detected hydrated salts, which contain labile bonds to water, on Europa [3,15]. Cryogenic reflectance spectra of hydrated sulfate salts have broad (150-300 nm), asymmetric absorption features due to bound water of hydration, as well as narrow features on the order of 10 to 20 nm. Cryogenic reflectance spectra of D. radiodurans are similarly dominated by asymmetric, water-related absorption features but also have two sharp (5-10 nm) features arising from amide bonds within the cells. These amide bonds are two orders of magnitude stronger than the hydration bonds in the salts [16]. Thus, the features arising from the amides could be exploited for remote-sensing investigations. In comparison, the Europa spectra from Galileo NIMS also contain the broad, asymmetric absorption features attributed to water and several other weaker absorptions. Together, the narrow features are suggestive of a mixture of materials. The NIMS data are consistent with the presence of water ice, with up to 50% sulfuric acid octahydrate, 20-45% hydrated salts, and possibly as much as 0.2 mg /cm3 carbonaceous material which may be of biological origin. However, inherent noise in the observations and limitations of spectral resolution must be taken into account when discussing these findings. References:[1]Greenberg et al.,Icarus 141,1999. [2]Pappalardo et al., JGR 104, 1999. [3]McCord et al., Science 280, 1998. [4]McCord et al., LPSC XXX,1508,1999a.[5]McCord et al., LPSC XXX,1510,1999b.[6]McCord et al., JGR 104,1999c. [7]McCord et al., DPS 31,1171,1999d.[8]McCordet al., JGR 104,1999e.[9]McCord et al., JGR 106,2001.[10]McCord et al.,JGR 107,E1-4,2002.[11]Dalton et al., NAI AstroBiol. Sci. Con. 2,2002.[12]Ventkataswaran et al., Appl Environ Microbiol. 66, 2000.[13]Mogul et al., PNAS, subm., 2002.[14]Cooper et al., Icarus 149, 2000.[15]Dalton, PhD Diss., U. Colorado,Boulder,2000.[16]Darwent, Nat. Bur. Stand., NSRDS-NBS 31,1970.

  8. Advanced Diagnostics for Reacting Flows

    DTIC Science & Technology

    1993-11-24

    time) Dr. J. Seitzman (25% time) Dr. D. Baer (25% time) 4.2 Graduate Research Assistants Tim Birbeck Renato Cedolin (50% time) Andrew Chang Paul...terms of the unsaturated absorption coefficient and an intensity-dependent factor by the relation 4 k,(vo) = ko (vo) 1 + • (8) In the theoretical...variation of the 1.0, the effective saturated absorption coefficient is spectral absorption coefficient that is relative to the 35% (k,/ ko = 0.65) and 44

  9. Exploring the Time Evolution of Cool Metallic Absorption Features in UV Burst Spectra

    NASA Astrophysics Data System (ADS)

    Belmes, K.; Madsen, C. A.; DeLuca, E.

    2017-12-01

    UV bursts are compact brightenings in active regions that appear in UV images. They are identified through three spectroscopic features: (1) broadening and intensification of NUV/FUV emission lines, (2) the presence of optically thin Si IV emission, and (3) the presence of absorption features from cool metallic ions. Properties (2) and (3) imply that bursts exist at transition region temperatures (≥ 80,000 K) but are located in the cooler lower chromosphere ( 5,000 K). Their energetic and dynamical properties remain poorly constrained. Improving our understanding of this phenomena could help us further constrain the energetic and dynamical properties of the chromosphere, as well as give us insight into whether or not UV bursts contribute to chromospheric and/or coronal heating. We analyzed the time evolution of UV bursts using spectral data from the Interface Region Imaging Spectrograph (IRIS). We inspected Si IV 1393.8 Å line profiles for Ni II 1393.3 Å absorption features to look for signs of heating. Weakening of absorption features over time could indicate heating of the cool ions above the burst, implying that thermal energy from the burst could rapidly conduct upward through the chromosphere. To detect the spectral profiles corresponding to bursts, we applied a four-parameter Gaussian fit to every profile in each observation and took cuts in parameter space to isolate the bursts. We then manually reviewed the remaining profiles by looking for a statistically significant appearance of Ni II 1393.3 Å absorption. We quantified these absorption features by normalizing the Si IV 1393.8 Å emission profiles and measuring the maximum fractional extinction in each. Our preliminary results indicate that Ni II 1393.3 Å absorption may undergo a cycle of strengthening and weakening throughout a burst's lifetime. However, further investigation is needed for confirmation. This work is supported by the NSF-REU solar physics program at SAO, grant number AGS-1560313.

  10. A two photon absorption laser induced fluorescence diagnostic for fusion plasmas.

    PubMed

    Magee, R M; Galante, M E; McCarren, D; Scime, E E; Boivin, R L; Brooks, N H; Groebner, R J; Hill, D N; Porter, G D

    2012-10-01

    The quality of plasma produced in a magnetic confinement fusion device is influenced to a large extent by the neutral gas surrounding the plasma. The plasma is fueled by the ionization of neutrals, and charge exchange interactions between edge neutrals and plasma ions are a sink of energy and momentum. Here we describe a diagnostic capable of measuring the spatial distribution of neutral gas in a magnetically confined fusion plasma. A high intensity (5 MW/cm(2)), narrow bandwidth (0.1 cm(-1)) laser is injected into a hydrogen plasma to excite the Lyman β transition via the simultaneous absorption of two 205 nm photons. The absorption rate, determined by measurement of subsequent Balmer α emission, is proportional to the number of particles with a given velocity. Calibration is performed in situ by filling the chamber to a known pressure of neutral krypton and exciting a transition close in wavelength to that used in hydrogen. We present details of the calibration procedure, including a technique for identifying saturation broadening, measurements of the neutral density profile in a hydrogen helicon plasma, and discuss the application of the diagnostic to plasmas in the DIII-D tokamak.

  11. A two photon absorption laser induced fluorescence diagnostic for fusion plasmasa)

    NASA Astrophysics Data System (ADS)

    Magee, R. M.; Galante, M. E.; McCarren, D.; Scime, E. E.; Boivin, R. L.; Brooks, N. H.; Groebner, R. J.; Hill, D. N.; Porter, G. D.

    2012-10-01

    The quality of plasma produced in a magnetic confinement fusion device is influenced to a large extent by the neutral gas surrounding the plasma. The plasma is fueled by the ionization of neutrals, and charge exchange interactions between edge neutrals and plasma ions are a sink of energy and momentum. Here we describe a diagnostic capable of measuring the spatial distribution of neutral gas in a magnetically confined fusion plasma. A high intensity (5 MW/cm2), narrow bandwidth (0.1 cm-1) laser is injected into a hydrogen plasma to excite the Lyman β transition via the simultaneous absorption of two 205 nm photons. The absorption rate, determined by measurement of subsequent Balmer α emission, is proportional to the number of particles with a given velocity. Calibration is performed in situ by filling the chamber to a known pressure of neutral krypton and exciting a transition close in wavelength to that used in hydrogen. We present details of the calibration procedure, including a technique for identifying saturation broadening, measurements of the neutral density profile in a hydrogen helicon plasma, and discuss the application of the diagnostic to plasmas in the DIII-D tokamak.

  12. The 4.5 micron Sulfate Absorption Feature on Mars and Its Relationship to Formation Environment

    NASA Technical Reports Server (NTRS)

    Blaney, D. L.

    2001-01-01

    The 4.5 micron sulfate absorption feature on Mars is spatially variable. It is a sensitive composition and hydration state and can be used to identify different types of aqueous environments. Additional information is contained in the original extended abstract.

  13. Poor diagnostic accuracy of a single fasting plasma citrulline concentration to assess intestinal energy absorption capacity.

    PubMed

    Peters, Job H C; Wierdsma, Nicolette J; Teerlink, Tom; van Leeuwen, Paul A M; Mulder, Chris J J; van Bodegraven, Ad A

    2007-12-01

    Our aim was to explore the diagnostic value of fasting citrulline concentrations to detect decreased intestinal energy absorption in patients with recently diagnosed celiac disease (CeD), refractory celiac disease (RCeD), and short bowel syndrome (SBS). Decreased intestinal energy absorption is regarded a marker of intestinal failure. Fasting plasma citrulline concentrations were determined by high performance liquid chromatography (HPLC) in a prospective study of 30 consecutive adult patients (15 CeD, 9 RCeD, and 16 SBS) and 21 healthy subjects. Intestinal energy absorption capacity using bomb calorimetry was determined in all patients and healthy subjects and was regarded as the gold standard for intestinal energy absorption function. The mean fasting plasma citrulline concentration was lower in RCeD patients than in healthy subjects (28.5+/-9.9 vs 38.1+/-8.0 micromol/L, P<0.05) and CeD patients (28.5+/-9.9 vs 38.1+/-6.4 micromol/L, P<0.05), however, clearly within reference values. The mean intestinal energy absorption capacity was lower in SBS patients than in healthy subjects (64.3+/-18.2 vs 90.3+/-3.5%, P<0.001), CeD patients (64.3+/-18.2 vs 89.2+/-3.4%, P<0.001), and the RCeD group (64.3+/-18.2 vs 82.3+/-11.7%, P<0.01). No relation was observed between fasting plasma citrulline concentration and intestinal energy absorption capacity (Pearson r=0.09, P=0.56). The area under the ROC curve for fasting plasma citrulline to detect decreased intestinal energy absorption capacity (i.e., <85%) was 0.50. Fasting plasma citrulline concentrations have poor test characteristics for detection of decreased intestinal energy absorption capacity in patients with enterocyte damage.

  14. A signal-detection-based diagnostic-feature-detection model of eyewitness identification.

    PubMed

    Wixted, John T; Mickes, Laura

    2014-04-01

    The theoretical understanding of eyewitness identifications made from a police lineup has long been guided by the distinction between absolute and relative decision strategies. In addition, the accuracy of identifications associated with different eyewitness memory procedures has long been evaluated using measures like the diagnosticity ratio (the correct identification rate divided by the false identification rate). Framed in terms of signal-detection theory, both the absolute/relative distinction and the diagnosticity ratio are mainly relevant to response bias while remaining silent about the key issue of diagnostic accuracy, or discriminability (i.e., the ability to tell the difference between innocent and guilty suspects in a lineup). Here, we propose a signal-detection-based model of eyewitness identification, one that encourages the use of (and helps to conceptualize) receiver operating characteristic (ROC) analysis to measure discriminability. Recent ROC analyses indicate that the simultaneous presentation of faces in a lineup yields higher discriminability than the presentation of faces in isolation, and we propose a diagnostic feature-detection hypothesis to account for that result. According to this hypothesis, the simultaneous presentation of faces allows the eyewitness to appreciate that certain facial features (viz., those that are shared by everyone in the lineup) are non-diagnostic of guilt. To the extent that those non-diagnostic features are discounted in favor of potentially more diagnostic features, the ability to discriminate innocent from guilty suspects will be enhanced.

  15. Simultaneous sensing of temperature, CO, and CO2 in a scramjet combustor using quantum cascade laser absorption spectroscopy

    NASA Astrophysics Data System (ADS)

    Spearrin, R. M.; Goldenstein, C. S.; Schultz, I. A.; Jeffries, J. B.; Hanson, R. K.

    2014-07-01

    A mid-infrared laser absorption sensor was developed for gas temperature and carbon oxide (CO, CO2) concentrations in high-enthalpy, hydrocarbon combustion flows. This diagnostic enables non-intrusive, in situ measurements in harsh environments produced by hypersonic propulsion ground test facilities. The sensing system utilizes tunable quantum cascade lasers capable of probing the fundamental mid-infrared absorption bands of CO and CO2 in the 4-5 µm wavelength domain. A scanned-wavelength direct absorption technique was employed with two lasers, one dedicated to each species, free-space fiber-coupled using a bifurcated hollow-core fiber for remote light delivery on a single line of sight. Scanned-wavelength modulation spectroscopy with second-harmonic detection was utilized to extend the dynamic range of the CO measurement. The diagnostic was field-tested on a direct-connect scramjet combustor for ethylene-air combustion. Simultaneous, laser-based measurements of carbon monoxide and carbon dioxide provide a basis for evaluating combustion completion or efficiency with temporal and spatial resolution in practical hydrocarbon-fueled engines.

  16. Line profiles variations from atmospheric eclipses: Constraints on the wind structure in Wolf-Rayet stars

    NASA Technical Reports Server (NTRS)

    Auer, L. H.; Koenigsberger, G.

    1994-01-01

    Binary systems in which one of the components has a stellar wind may present a phenomenon known as 'wind' or 'atmospheric eclipse', in which that wind occults the luminous disk of the companion. The enhanced absorption profile, relative to the spectrum at uneclipsed orbital phases, can be be modeled to yield constraints on the spatial structure of the eclipsing wind. A new, very efficient approach to the radiative transfer problem, which makes no requirements with respect to monotonicity of the velocity gradient or size of that gradient, is presented. The technique recovers both the comoving frame calculation and the Sobolev approximation in the appropiate limits. Sample computer simulations of the line profile variations induced by wind eclipses are presented. It is shown that the location of the wind absorption features in frequency is a diagnostic tool for identifying the size of the wind acceleration region. Comparison of the model profile variations with the observed variations in the Wolf-Rayet (W-R)+6 binary system V444 Cyg illustrate how the method can be used to derive information on the structure of the wind of the W-R star constrain the size of the W-R core radius.

  17. Vitamin B12 among Vegetarians: Status, Assessment and Supplementation

    PubMed Central

    Rizzo, Gianluca; Laganà, Antonio Simone; Rapisarda, Agnese Maria Chiara; La Ferrera, Gioacchina Maria Grazia; Buscema, Massimo; Rossetti, Paola; Nigro, Angela; Muscia, Vincenzo; Valenti, Gaetano; Sapia, Fabrizio; Sarpietro, Giuseppe; Zigarelli, Micol; Vitale, Salvatore Giovanni

    2016-01-01

    Cobalamin is an essential molecule for humans. It acts as a cofactor in one-carbon transfers through methylation and molecular rearrangement. These functions take place in fatty acid, amino acid and nucleic acid metabolic pathways. The deficiency of vitamin B12 is clinically manifested in the blood and nervous system where the cobalamin plays a key role in cell replication and in fatty acid metabolism. Hypovitaminosis arises from inadequate absorption, from genetic defects that alter transport through the body, or from inadequate intake as a result of diet. With the growing adoption of vegetarian eating styles in Western countries, there is growing focus on whether diets that exclude animal foods are adequate. Since food availability in these countries is not a problem, and therefore plant foods are sufficiently adequate, the most delicate issue remains the contribution of cobalamin, which is poorly represented in plants. In this review, we will discuss the status of vitamin B12 among vegetarians, the diagnostic markers for the detection of cobalamin deficiency and appropriate sources for sufficient intake, through the description of the features and functions of vitamin B12 and its absorption mechanism. PMID:27916823

  18. O2 on ganymede: Spectral characteristics and plasma formation mechanisms

    USGS Publications Warehouse

    Calvin, W.M.; Johnson, R.E.; Spencer, J.R.

    1996-01-01

    Weak absorption features in the visible reflectance spectrum of Jupiter's satellite Ganymede have been correlated to those observed in the spectrum of molecular oxygen. We examine the spectral characteristics of these absorption features in all phases of O2 and conclude that the molecular oxygen is most likely present at densities similar to the liquid or solid ??-phase. The contribution of O2 to spectral features observed on Ganymede in the near-infrared wavelength region affects the previous estimates of photon pathlength in ice. The concentration of the visible absorption features on the trailing hemisphere of Ganymede suggests an origin due to bombardment by magneto-spheric ions. We derive an approximate O2 formation rate from this mechanism and consider the state of O2 within the surface.

  19. Temperature measurement using ultraviolet laser absorption of carbon dioxide behind shock waves.

    PubMed

    Oehlschlaeger, Matthew A; Davidson, David F; Jeffries, Jay B

    2005-11-01

    A diagnostic for microsecond time-resolved temperature measurements behind shock waves, using ultraviolet laser absorption of vibrationally hot carbon dioxide, is demonstrated. Continuous-wave laser radiation at 244 and 266 nm was employed to probe the spectrally smooth CO2 ultraviolet absorption, and an absorbance ratio technique was used to determine temperature. Measurements behind shock waves in both nonreacting and reacting (ignition) systems were made, and comparisons with isentropic and constant-volume calculations are reported.

  20. Use of airborne imaging spectrometer data to map minerals associated with hydrothermally altered rocks in the northern grapevine mountains, Nevada, and California

    USGS Publications Warehouse

    Kruse, F.A.

    1988-01-01

    Three flightlines of Airborne Imaging Spectrometer (AIS) data, acquired over the northern Grapevine Mountains, Nevada, and California, were used to map minerals associated with hydrothermally altered rocks. The data were processed to remove vertical striping, normalized using an equal area normalization, and reduced to reflectance relative to an average spectrum derived from the data. An algorithm was developed to automatically calculate the absorption band parameters band position, band depth, and band width for the strongest absorption feature in each pixel. These parameters were mapped into an intensity, hue, saturation (IHS) color system to produce a single color image that summarized the absorption band information, This image was used to map areas of potential alteration based upon the predicted relationships between the color image and mineral absorption band. Individual AIS spectra for these areas were then examined to identify specific minerals. Two types of alteration were mapped with the AIS data. Areas of quartz-sericite-pyrite alteration were identified based upon a strong absorption feature near 2.21 ??m, a weak shoulder near 2.25 ??m, and a weak absorption band near 2.35 ??m caused by sericite (fine-grained muscovite). Areas of argillic alteration were defined based on the presence of montmorillonite, identified by a weak to moderate absorption feature near 2.21 ??m and the absence of the 2.35 ??m band. Montmorillonite could not be identified in mineral mixtures. Calcite and dolomite were identified based on sharp absorption features near 2.34 and 2.32 ??m, respectively. Areas of alteration identified using the AIS data corresponded well with areas mapped using field mapping, field reflectance spectra, and laboratory spectral measurements. ?? 1988.

  1. Orthogonal system of fractural and integrated diagnostic features in vibration analysis

    NASA Astrophysics Data System (ADS)

    Kostyukov, V. N.; Boychenko, S. N.

    2017-08-01

    The paper presents the results obtained in the studies of the orthogonality of the vibration diagnostic features system comprising the integrated features, particularly - root mean square values of vibration acceleration, vibration velocity, vibration displacement and fractal feature (Hurst exponent). To diagnose the condition of the equipment by the vibration signal, the orthogonality of the vibration diagnostic features is important. The fact of orthogonality shows that the system of features is not superfluous and allows the maximum coverage of the state space of the object being diagnosed. This, in turn, increases reliability of the machinery condition monitoring results. The studies were carried out on the models of vibration signals using the programming language R.

  2. Derivative Analysis of Absorption Features in Hyperspectral Remote Sensing Data of Carbonate Sediments

    DTIC Science & Technology

    2002-12-30

    reflectance of carbonate sediments and application to shallow water benthic habitat classification,” Doctoral Dissertation, University of Miami. Chap.3...resolve overlapping features. A primary application has been to analyze pigment and chemical composition of leaves in order to track physiological...final absorption feature was observed at 630 nm, in a region associated with the biliprotein, phycocyanin [16,17]. As biliproteins are water soluble

  3. Plant phenolics and absorption features in vegetation reflectance spectra near 1.66 μm

    NASA Astrophysics Data System (ADS)

    Kokaly, Raymond F.; Skidmore, Andrew K.

    2015-12-01

    Past laboratory and field studies have quantified phenolic substances in vegetative matter from reflectance measurements for understanding plant response to herbivores and insect predation. Past remote sensing studies on phenolics have evaluated crop quality and vegetation patterns caused by bedrock geology and associated variations in soil geochemistry. We examined spectra of pure phenolic compounds, common plant biochemical constituents, dry leaves, fresh leaves, and plant canopies for direct evidence of absorption features attributable to plant phenolics. Using spectral feature analysis with continuum removal, we observed that a narrow feature at 1.66 μm is persistent in spectra of manzanita, sumac, red maple, sugar maple, tea, and other species. This feature was consistent with absorption caused by aromatic Csbnd H bonds in the chemical structure of phenolic compounds and non-hydroxylated aromatics. Because of overlapping absorption by water, the feature was weaker in fresh leaf and canopy spectra compared to dry leaf measurements. Simple linear regressions of feature depth and feature area with polyphenol concentration in tea resulted in high correlations and low errors (% phenol by dry weight) at the dry leaf (r2 = 0.95, RMSE = 1.0%, n = 56), fresh leaf (r2 = 0.79, RMSE = 2.1%, n = 56), and canopy (r2 = 0.78, RMSE = 1.0%, n = 13) levels of measurement. Spectra of leaves, needles, and canopies of big sagebrush and evergreens exhibited a weak absorption feature centered near 1.63 μm, short ward of the phenolic compounds, possibly consistent with terpenes. This study demonstrates that subtle variation in vegetation spectra in the shortwave infrared can directly indicate biochemical constituents and be used to quantify them. Phenolics are of lesser abundance compared to the major plant constituents but, nonetheless, have important plant functions and ecological significance. Additional research is needed to advance our understanding of the spectral influences of plant phenolics and terpenes relative to dominant leaf biochemistry (water, chlorophyll, protein/nitrogen, cellulose, and lignin).

  4. Solid methane on Triton and Pluto - 3- to 4-micron spectrophotometry

    NASA Technical Reports Server (NTRS)

    Spencer, John R.; Buie, Marc W.; Bjoraker, Gordon L.

    1990-01-01

    Methane has been identified in the Pluto/Charon system on the basis of absorption features in the reflectance spectrum at 1.5 and 2.3 microns; attention is presently given to observations of a 3.25 micron-centered deep absorption feature in Triton and Pluto/Charon system reflectance spectra. This absorption may indicate the presence of solid methane, constituting either the dominant surface species or a mixture with a highly transparent substance, such as N2 frost.

  5. Optical detection of tracer species in strongly scattering media.

    PubMed

    Brauser, Eric M; Rose, Peter E; McLennan, John D; Bartl, Michael H

    2015-03-01

    A combination of optical absorption and scattering is used to detect tracer species in a strongly scattering medium. An optical setup was developed, consisting of a dual-beam scattering detection scheme in which sample scattering beam overlaps with the characteristic absorption feature of quantum dot tracer species, while the reference scattering beam is outside any absorption features of the tracer. This scheme was successfully tested in engineered breakthrough tests typical of wastewater and subsurface fluid analysis, as well as in batch analysis of oil and gas reservoir fluids and biological samples. Tracers were detected even under highly scattering conditions, conditions in which conventional absorption or fluorescence methods failed.

  6. Multiplexed absorption tomography with calibration-free wavelength modulation spectroscopy

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Cai, Weiwei; Kaminski, Clemens F., E-mail: cfk23@cam.ac.uk

    2014-04-14

    We propose a multiplexed absorption tomography technique, which uses calibration-free wavelength modulation spectroscopy with tunable semiconductor lasers for the simultaneous imaging of temperature and species concentration in harsh combustion environments. Compared with the commonly used direct absorption spectroscopy (DAS) counterpart, the present variant enjoys better signal-to-noise ratios and requires no baseline fitting, a particularly desirable feature for high-pressure applications, where adjacent absorption features overlap and interfere severely. We present proof-of-concept numerical demonstrations of the technique using realistic phantom models of harsh combustion environments and prove that the proposed techniques outperform currently available tomography techniques based on DAS.

  7. Fourier Transform Infrared Absorption Spectroscopy of Gas-Phase and Surface Reaction Products during Si Etching in Inductively Coupled Cl2 Plasmas

    NASA Astrophysics Data System (ADS)

    Miyata, Hiroki; Tsuda, Hirotaka; Fukushima, Daisuke; Takao, Yoshinori; Eriguchi, Koji; Ono, Kouichi

    2011-10-01

    A better understanding of plasma-surface interactions is indispensable during etching, including the behavior of reaction or etch products, because the products on surfaces and in the plasma are important in passivation layer formation through their redeposition on surfaces. In practice, the nanometer-scale control of plasma etching would still rely largely on such passivation layer formation as well as ion-enhanced etching on feature surfaces. This paper presents in situ Fourier transform infrared (FTIR) absorption spectroscopy of gas-phase and surface reaction products during inductively coupled plasma (ICP) etching of Si in Cl2. The observation was made in the gas phase by transmission absorption spectroscopy (TAS), and also on the substrate surface by reflection absorption spectroscopy (RAS). The quantum chemical calculation was also made of the vibrational frequency of silicon chloride molecules. The deconvolution of the TAS spectrum revealed absorption features of Si2Cl6 and SiClx (x = 1-3) as well as SiCl4, while that of the RAS spectrum revealed relatively increased absorption features of unsaturated silicon chlorides. A different behavior was also observed in bias power dependence between the TAS and RAS spectra.

  8. Advances in the FTU collective Thomson scattering system

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Bin, W., E-mail: wbin@ifp.cnr.it; Bruschi, A.; Grosso, G.

    The new collective Thomson scattering diagnostic installed on the Frascati Tokamak Upgrade device started its first operations in 2014. The ongoing experiments investigate the presence of signals synchronous with rotating tearing mode islands, possibly due to parametric decay processes, and phenomena affecting electron cyclotron beam absorption or scattering measurements. The radiometric system, diagnostic layout, and data acquisition system were improved accordingly. The present status and near-term developments of the diagnostic are presented.

  9. Effect of absorption on nonlinear propagation of short ultrasound pulses generated by rectangular transducers

    NASA Astrophysics Data System (ADS)

    Khokhlova, Vera A.; Ponomaryov, Anatoly E.; Averkiou, Michalakis A.; Crum, Lawrence A.

    2002-11-01

    A numerical solution of the KZK-type parabolic nonlinear evolution equation is presented for finite-amplitude sound beams radiated by rectangular sources. The initial acoustic waveform is a short tone burst, similar to those used in diagnostic ultrasound. The generation of higher harmonic components and their spatial structure are investigated for media similar to tissue with various frequency dependent absorption properties. Nonlinear propagation in a thermoviscous fluid with a quadratic frequency law of absorption is compared to that in tissue with a nearly linear frequency law of absorption. The algorithm is based on that originally developed by Lee and Hamilton [J. Acoust. Soc. Am. 97, 906-917 (1995)] to model circular sources. The algorithm is generalized for two-dimensional sources without axial symmetry. The diffraction integral is adapted in the time-domain for two dimensions with the implicit backward finite difference (IBFD) scheme in the nearfield and with the alternate direction implicit (ADI) method at longer distances. Arbitrary frequency dependence of absorption is included in this model and solved in the frequency-domain using the FFT technique. The results of simulation may be used to better understand the nonlinear beam structure for tissue harmonic imaging in modern medical diagnostic scanners. [Work supported by CRDF and RFBR.

  10. Spectra of Particulate Backscattering in Natural Waters

    NASA Technical Reports Server (NTRS)

    Gordon, Howard, R.; Lewis, Marlon R.; McLean, Scott D.; Twardowski, Michael S.; Freeman, Scott A.; Voss, Kenneth J.; Boynton, Chris G.

    2009-01-01

    Hyperspectral profiles of downwelling irradiance and upwelling radiance in natural waters (oligotrophic and mesotrophic) are combined with inverse radiative transfer to obtain high resolution spectra of the absorption coefficient (a) and the backscattering coefficient (bb) of the water and its constituents. The absorption coefficient at the mesotrophic station clearly shows spectral absorption features attributable to several phytoplankton pigments (Chlorophyll a, b, c, and Carotenoids). The backscattering shows only weak spectral features and can be well represented by a power-law variation with wavelength (lambda): b(sub b) approx. Lambda(sup -n), where n is a constant between 0.4 and 1.0. However, the weak spectral features in b(sub b), suggest that it is depressed in spectral regions of strong particle absorption. The applicability of the present inverse radiative transfer algorithm, which omits the influence of Raman scattering, is limited to lambda < 490 nm in oligotrophic waters and lambda < 575 nm in mesotrophic waters.

  11. A search for ultraviolet circumstellar gas absorption features in alpha Piscis Austrinus (Fomalhaut), a possible Beta Pictoris-like system

    NASA Technical Reports Server (NTRS)

    Cheng, K.-P.; Bruhweiler, Fred C.; Kondo, Yoji

    1994-01-01

    Archival high-dispersion International Ultraviolet Explorer (IUE) spectra have been used to search for circumstellar gas absorption features in alpha PsA (A3 V), a nearby (6.7 pc) proto-planetary system candidate. Recent sub-millimeter mapping observations around the region of alpha PsA indicate a spatially resolved dust disk like the one seen around Beta Pic. To determine how closely this putative disk resembles that of Beta Pic, we have searched for signatures of circumstellar gaseous absorption in all the available IUE high-dispersion data of alpha PsA. Examination of co-added IUE spectra shows weak circumstellar absorptions from excited levels in the resonance multiplet of Fe II near 2600 A. We also conclude that the sharp C I feature near 1657 A, previously identified as interstellar absorption toward alpha PsA, likely has a circumstellar origin. However, because the weakness of these absorption features, we will consider the presence of circumstellar gas as tentative and should be verified by using the Goddard High-Resolution Spectrograph aboard the Hubble Space Telescope. No corresponding circumstellar absorption is detected in higher ionization Fe III and Al III. Since the collisionally ionized nonphotospheric Al III resonance absorption seen in Beta Pic is likely formed close to the stellar surface, its absence in the UV spectra of alpha PsA could imply that, in contrast with Beta Pic, there is no active gaseous disk infall onto the central star. In the alpha PsA gaseous disk, if we assume a solar abundance for iron and all the iron is in the form of Fe II, plus a disk temperature of 5000 K, the Fe II UV1 absorption at 2611.8743 A infers a total hydrogen column density along the line of sight through the circumstellar disk of N(H) approximately equals 3.8 x 10(exp 17)/cm.

  12. Rocket Engine Plume Diagnostics at Stennis Space Center

    NASA Technical Reports Server (NTRS)

    Tejwani, Gopal D.; Langford, Lester A.; VanDyke, David B.; McVay, Gregory P.; Thurman, Charles C.

    2003-01-01

    The Stennis Space Center has been at the forefront of development and application of exhaust plume spectroscopy to rocket engine health monitoring since 1989. Various spectroscopic techniques, such as emission, absorption, FTIR, LIF, and CARS, have been considered for application at the engine test stands. By far the most successful technology h a been exhaust plume emission spectroscopy. In particular, its application to the Space Shuttle Main Engine (SSME) ground test health monitoring has been invaluable in various engine testing and development activities at SSC since 1989. On several occasions, plume diagnostic methods have successfully detected a problem with one or more components of an engine long before any other sensor indicated a problem. More often, they provide corroboration for a failure mode, if any occurred during an engine test. This paper gives a brief overview of our instrumentation and computational systems for rocket engine plume diagnostics at SSC. Some examples of successful application of exhaust plume spectroscopy (emission as well as absorption) to the SSME testing are presented. Our on-going plume diagnostics technology development projects and future requirements are discussed.

  13. Photoacoustic characterization of ovarian tissue

    NASA Astrophysics Data System (ADS)

    Aguirre, Andres; Gamelin, John; Guo, Puyun; Yan, Shikui; Sanders, Mary; Brewer, Molly; Zhu, Quing

    2009-02-01

    Ovarian cancer has the highest mortality of all gynecologic cancers with a five-year survival rate of only 30%. Because current imaging techniques (ultrasound, CT, MRI, PET) are not capable of detecting ovarian cancer early, most diagnoses occur in later stages (III/IV). Thus many women are not correctly diagnosed until the cancer becomes widely metastatic. On the other hand, while the majority of women with a detectable ultrasound abnormality do not harbor a cancer, they all undergo unnecessary oophorectomy. Hence, new imaging techniques that can provide functional and molecular contrasts are needed for improving the specificity of ovarian cancer detection and characterization. One such technique is photoacoustic imaging, which has great potential to reveal early tumor angiogenesis through intrinsic optical absorption contrast from hemoglobin or extrinsic contrast from conjugated agents binding to appropriate molecular receptors. To better understand the cancer disease process of ovarian tissue using photoacoustic imaging, it is necessary to first characterize the properties of normal ovarian tissue. We have imaged ex-vivo ovarian tissue using a 3D co-registered ultrasound and photoacoustic imaging system. The system is capable of volumetric imaging by means of electronic focusing. Detecting and visualizing small features from multiple viewing angles is possible without the need for any mechanical movement. The results show strong optical absorption from vasculature, especially highly vascularized corpora lutea, and low absorption from follicles. We will present correlation of photoacoustic images from animals with histology. Potential application of this technology would be the noninvasive imaging of the ovaries for screening or diagnostic purposes.

  14. Development of a Multi-modal Tissue Diagnostic System Combining High Frequency Ultrasound and Photoacoustic Imaging with Lifetime Fluorescence Spectroscopy

    PubMed Central

    Sun, Yang; Stephens, Douglas N.; Park, Jesung; Sun, Yinghua; Marcu, Laura; Cannata, Jonathan M.; Shung, K. Kirk

    2010-01-01

    We report the development and validate a multi-modal tissue diagnostic technology, which combines three complementary techniques into one system including ultrasound backscatter microscopy (UBM), photoacoustic imaging (PAI), and time-resolved laser-induced fluorescence spectroscopy (TR-LIFS). UBM enables the reconstruction of the tissue microanatomy. PAI maps the optical absorption heterogeneity of the tissue associated with structure information and has the potential to provide functional imaging of the tissue. Examination of the UBM and PAI images allows for localization of regions of interest for TR-LIFS evaluation of the tissue composition. The hybrid probe consists of a single element ring transducer with concentric fiber optics for multi-modal data acquisition. Validation and characterization of the multi-modal system and ultrasonic, photoacoustic, and spectroscopic data coregistration were conducted in a physical phantom with properties of ultrasound scattering, optical absorption, and fluorescence. The UBM system with the 41 MHz ring transducer can reach the axial and lateral resolution of 30 and 65 μm, respectively. The PAI system with 532 nm excitation light from a Nd:YAG laser shows great contrast for the distribution of optical absorbers. The TR-LIFS system records the fluorescence decay with the time resolution of ~300 ps and a high sensitivity of nM concentration range. Biological phantom constructed with different types of tissues (tendon and fat) was used to demonstrate the complementary information provided by the three modalities. Fluorescence spectra and lifetimes were compared to differentiate chemical composition of tissues at the regions of interest determined by the coregistered high resolution UBM and PAI image. Current results demonstrate that the fusion of these techniques enables sequentially detection of functional, morphological, and compositional features of biological tissue, suggesting potential applications in diagnosis of tumors and atherosclerotic plaques. PMID:21894259

  15. Development of a Multi-modal Tissue Diagnostic System Combining High Frequency Ultrasound and Photoacoustic Imaging with Lifetime Fluorescence Spectroscopy.

    PubMed

    Sun, Yang; Stephens, Douglas N; Park, Jesung; Sun, Yinghua; Marcu, Laura; Cannata, Jonathan M; Shung, K Kirk

    2008-01-01

    We report the development and validate a multi-modal tissue diagnostic technology, which combines three complementary techniques into one system including ultrasound backscatter microscopy (UBM), photoacoustic imaging (PAI), and time-resolved laser-induced fluorescence spectroscopy (TR-LIFS). UBM enables the reconstruction of the tissue microanatomy. PAI maps the optical absorption heterogeneity of the tissue associated with structure information and has the potential to provide functional imaging of the tissue. Examination of the UBM and PAI images allows for localization of regions of interest for TR-LIFS evaluation of the tissue composition. The hybrid probe consists of a single element ring transducer with concentric fiber optics for multi-modal data acquisition. Validation and characterization of the multi-modal system and ultrasonic, photoacoustic, and spectroscopic data coregistration were conducted in a physical phantom with properties of ultrasound scattering, optical absorption, and fluorescence. The UBM system with the 41 MHz ring transducer can reach the axial and lateral resolution of 30 and 65 μm, respectively. The PAI system with 532 nm excitation light from a Nd:YAG laser shows great contrast for the distribution of optical absorbers. The TR-LIFS system records the fluorescence decay with the time resolution of ~300 ps and a high sensitivity of nM concentration range. Biological phantom constructed with different types of tissues (tendon and fat) was used to demonstrate the complementary information provided by the three modalities. Fluorescence spectra and lifetimes were compared to differentiate chemical composition of tissues at the regions of interest determined by the coregistered high resolution UBM and PAI image. Current results demonstrate that the fusion of these techniques enables sequentially detection of functional, morphological, and compositional features of biological tissue, suggesting potential applications in diagnosis of tumors and atherosclerotic plaques.

  16. Magnetized Disk Winds in NGC 3783

    NASA Technical Reports Server (NTRS)

    Fukumura, Keigo; Kazanas, Demosthenes; Shrader, Chris; Behar, Ehud; Tombesi, Francesco; Contopoulos, Ioannis

    2018-01-01

    We analyze a 900 kilosecond stacked Chandra/HETG (High-Energy Transmission Grating) spectrum of NGC 3783 in the context of magnetically driven accretion-disk wind models in an effort to provide tight constraints on the global conditions of the underlying absorbers. Motivated by the earlier measurements of its absorption measure distribution (AMD) indicating X-ray-absorbing ionic columns that decrease slowly with decreasing ionization parameter, we employ 2-dimension (2-D) magnetohydrodynamic (MHD) disk wind models to describe the global outflow. We compute its photoionization structure along with the wind kinematic properties, allowing us to further calculate in a self-consistent fashion the shapes of the major X-ray absorption lines. With the wind radial density profile determined by the AMD, the profiles of the ensemble of the observed absorption features are determined by the two global parameters of the MHD wind; i.e., disk inclination theta (sub obs) and wind density normalization n (sub o). Considering the most significant absorption features in the approximately 1.8-20 angstrom range, we show that the MHD wind is best described by n(r) approximately equal to 6.9 times 10 (sup 11) (r/r (sub o)) (sup - 1.15) cubic centimeters and theta (sub obs). We argue that winds launched by X-ray heating or radiation pressure, or even MHD winds but with steeper radial density profiles, are strongly disfavored by data. Considering the properties of Fe K-band absorption features (i.e., Fe XXV and Fe XXVI), while typically prominent in the active galactic nucleus X-ray spectra, they appear to be weak in NGC 3783. For the specific parameters of our model obtained by fitting the AMD and the rest of the absorption features, these features are found to be weak, in agreement with observations.

  17. Magnetized Disk Winds in NGC 3783

    NASA Astrophysics Data System (ADS)

    Fukumura, Keigo; Kazanas, Demosthenes; Shrader, Chris; Behar, Ehud; Tombesi, Francesco; Contopoulos, Ioannis

    2018-01-01

    We analyze a 900 ks stacked Chandra/HETG spectrum of NGC 3783 in the context of magnetically driven accretion-disk wind models in an effort to provide tight constraints on the global conditions of the underlying absorbers. Motivated by the earlier measurements of its absorption measure distribution (AMD) indicating X-ray-absorbing ionic columns that decrease slowly with decreasing ionization parameter, we employ 2D magnetohydrodynamic (MHD) disk wind models to describe the global outflow. We compute its photoionization structure along with the wind kinematic properties, allowing us to further calculate in a self-consistent fashion the shapes of the major X-ray absorption lines. With the wind radial density profile determined by the AMD, the profiles of the ensemble of the observed absorption features are determined by the two global parameters of the MHD wind; i.e., disk inclination {θ }{obs} and wind density normalization n o . Considering the most significant absorption features in the ∼1.8–20 Å range, we show that the MHD wind is best described by n{(r)∼ 6.9× {10}11(r/{r}o)}-1.15 cm‑3 and {θ }{obs}=44^\\circ . We argue that winds launched by X-ray heating or radiation pressure, or even MHD winds but with steeper radial density profiles, are strongly disfavored by data. Considering the properties of Fe K-band absorption features (i.e., Fe XXV and Fe XXVI), while typically prominent in the active galactic nucleus X-ray spectra, they appear to be weak in NGC 3783. For the specific parameters of our model obtained by fitting the AMD and the rest of the absorption features, these features are found to be weak, in agreement with observations.

  18. [The reconstruction of two-dimensional distributions of gas concentration in the flat flame based on tunable laser absorption spectroscopy].

    PubMed

    Jiang, Zhi-Shen; Wang, Fei; Xing, Da-Wei; Xu, Ting; Yan, Jian-Hua; Cen, Ke-Fa

    2012-11-01

    The experimental method by using the tunable diode laser absorption spectroscopy combined with the model and algo- rithm was studied to reconstruct the two-dimensional distribution of gas concentration The feasibility of the reconstruction program was verified by numerical simulation A diagnostic system consisting of 24 lasers was built for the measurement of H2O in the methane/air premixed flame. The two-dimensional distribution of H2O concentration in the flame was reconstructed, showing that the reconstruction results reflect the real two-dimensional distribution of H2O concentration in the flame. This diagnostic scheme provides a promising solution for combustion control.

  19. Production of Ti-C presolar carbide grain analogies and its infrared spectra

    NASA Astrophysics Data System (ADS)

    Kimura, Y.; Ikegami, A.; Tanigaki, T.; Ishikawa, M.; Sato, T.; Suzuki, H.; Kido, O.; Kaito, C.

    The infrared emission of the circumstellar environment of carbon-rich stars and dense molecular cloud cores is believed to be dominated by the emissivity of carbon dust. The origins of absorption peaks will be identified on the basis of laboratory studies. Important factors in the determination of absorption features are size, shape and structure of the grain (Bohren and Huffman, 1983). Therefore, the production of presolar grain analogy is important for the identification of the observation spectra. Recently, we succeeded in the formation of Si-, Ti- and Zr-C grains of the order of 50 nm by advanced gas evaporation method. We have started to obtain characteristic data of carbide grains in laboratory experiments. The spectra from ultraviolet to infrared of samples embedded in KBr pellets are presented. In the present study, we will elucidate the correlation between the size of TiC grain or thickness of the carbon mantle layer and spectra of TiC core-carbon mantle grains. Because TiC is one of the candidates of 21 micron feature. The absorption peaks of TiC core (50 nm)-carbon mantle (2 nm) grains were found to be at 9.5 and 12.5 microns. When the thickness of the mantle layer increased to 15 nm, the peak at 12.5 microns disappeared and the peak at 9.5 microns was significantly weakened. These results are similar to the calculated result for SiC core-carbon mantle grains, i.e., increased thickness of the mantle layer weakens the spectrum intensity (Kozasa et al., 1996). The 20.1 micron absorption feature never appeared, even if the same size grains seen in meteorites were produced. Moreover, the infrared spectra were observed when the size of TiC grains was smaller than presolar grain. Carbon was deposited on the surface of Ti grains. Then, TiC nanocrystallites with the size of 2-3 nm were produced by the diffusion of Ti and/or carbon. The new absorption feature was appeared at 14 microns. The 12.5 micron absorption was hardly seen. If the samples are heated at 700circC for 1h, crystallites size of TiC was increased to about 5 nm. The absorption feature at 14 microns was weaken. It was concluded that the infrared absorption feature was depend on the crystallites size.

  20. Hyperspectral analysis of the ultramafic complex and adjacent lithologies at Mordor, NT, Australia

    USGS Publications Warehouse

    Rowan, L.C.; Simpson, C.J.; Mars, J.C.

    2004-01-01

    The Mordor Complex consists of a series of potassic ultramafic rocks which were intruded into Proterozoic felsic gneisses and amphibolite and are overlain by quartzite and unconsolidated deposits. In situ and laboratory 0.4 to 2.5 ??m reflectance spectra show Al-OH absorption features caused by absorption in muscovite, kaolinite, and illite/smectite in syenite, granitic gneiss, quartzite and unconsolidated sedimentary deposits, and Fe,Mg-OH features due to phlogopite, biotite, epidote, and hornblende in the mafic and ultramafic rocks. Ferrous-iron absorption positioned near 1.05 ??m is most intense in peridotite reflectance spectra. Ferric-iron absorption is intense in most of the felsic lithologies. HyMap data were recorded in 126 narrow bands from 0.43 to 2.5 ??m along a 7-km-wide swath with approximately 6-m spatial resolution. Correction of the data to spectral reflectance was accomplished by reference to in situ measurements of an extensive, alluvial plain. Spectral classes for matched filter processing were selected by using the pixel purity index procedure and analysis of in situ and laboratory spectra. Considering the spatial distribution of the resulting 14 classes, some classes were combined, which produced eight classes characterized by Al-OH absorption features, and three Fe,Mg-OH absorption-feature classes. Comparison of the distribution of these 11 spectral classes to a generalized lithologic map of the study area shows that the spectral distinction among the eight Al-OH classes is related to variations in primary lithology, weathering products, and vegetation density. Quartzite is represented in three classes, syenite corresponds to a single scattered class, quartz-muscovite-biotite schist defines a single very coherent class, and unconsolidated sediments are portrayed in four classes. The three mafic-ultramafic classes are distinguished on the basis of generally intense Fe,Mg-OH and ferrous-iron absorption features. A single class represents the main Mordor ultramafic mass. Epidote-bearing rocks define another class, which corresponds to biotite gneiss and, in the southern part of the area, to fracture zones. The third class, which exhibits Al-OH, as well as Fe,Mg-OH features, represents hornblende gneiss and other mafic gneisses. These results indicate the importance of analyzing the VNIR and SWIR spectral shape and albedo, as well as analyzing specific spectral features, for mapping lithologic units in this weathered terrain. ?? 2004 Elsevier Inc. All rights reserved.

  1. An Investigation of the 3-μm Feature in M-Type Asteroids

    NASA Astrophysics Data System (ADS)

    Landsman, Zoe A.; Campins, H.; Hargrove, K.; Pinilla-Alonso, N.; Emery, J.; Ziffer, J.

    2013-10-01

    The M-type asteroids had originally been interpreted as the disrupted iron cores of differentiated bodies by spectral analogy with the NiFe meteorites. More detailed studies have since indicated a range of compositions. In particular, the presence of a 3-µm feature, diagnostic of hydration, detected in more than 35% of surveyed M-type asteroids (Jones et al. 1990, Rivkin et al. 1995, 2000) has challenged the notion that these bodies are all metallic. Spectroscopy in the 0.8 - 2.5 µm region has revealed absorption features due to mafic silicates and hydroxides or phyllosilicates (Fornasier et al. 2010, Hardersen et al. 2006, 2010, Ockert-Bell et al. 2010). Radar studies have shown that most M-types are not likely to be iron cores, but they typically have a higher metal content than average (Shepard et al. 2010). Taken together, these results paint a fairly confounding picture of the M-type asteroids. While several interpretations have been suggested, more work is needed to clarify the mineralogy of these bodies. We have started a new spectroscopic study of the M asteroids in the 2 - 4 µm region. We seek to characterize the shape, band center, and band depth of the 3-µm feature where it is present, as these measures are indicative of the type and extent of hydration present on asteroids (Lebofsky et al. 1985, Rivkin et al. 2002, Takir & Emery 2012, Volguardsen et al. 2007). With this work, we hope to shed new light on the origin of hydration on M asteroids and its context within their mineralogy and thermal evolution. In July 2013, we obtained 2 - 4 µm spectra for 69 Hesperia, 136 Austria, and 261 Prymno with the SpeX at NASA’s IRTF, and are in the process of reducing the data. We have also obtained 0.8 - 2.0 µm data for 261 Prymno using the NICS at the TNG in February 2013. We report the presence of an absorption feature near 0.9 µm in Prymno’s spectrum, indicating a partially silicate composition. Based on spectral, physical and orbital similarities to other hydrated M-types, we predict the presence of a 3-μm feature in Prymno’s 2 - 4 μm. More 2 - 4 μm observations of M-type asteroids are planned.

  2. Correlations between Crystallite Size, Shape, Surface, and Infrared Spectra Using the Ti-C System

    NASA Astrophysics Data System (ADS)

    Kimura, Y.; Ikegami, A.; Kurumada, M.; Kamitsuji, K.; Kaito, C.

    2004-06-01

    TiC crystallites less than 10 nm in size showed an absorption feature at 14.3 μm. This 14.3 μm absorption was rarely seen in specimens ranging from bulk material to grains of 50 nm in size. The 14.3 μm feature was weakened as a result of the growth of TiC crystallites by heat treatment. When the carbide grains were covered with a carbon layer, the absorption peaks were considerably weakened, i.e., the absorption intensity depended on the grain surface state. A possible explanation is that the effects of size and shape on the spectra depend on the surface anisotropy.

  3. AFM feature definition for neural cells on nanofibrillar tissue scaffolds.

    PubMed

    Tiryaki, Volkan M; Khan, Adeel A; Ayres, Virginia M

    2012-01-01

    A diagnostic approach is developed and implemented that provides clear feature definition in atomic force microscopy (AFM) images of neural cells on nanofibrillar tissue scaffolds. Because the cellular edges and processes are on the same order as the background nanofibers, this imaging situation presents a feature definition problem. The diagnostic approach is based on analysis of discrete Fourier transforms of standard AFM section measurements. The diagnostic conclusion that the combination of dynamic range enhancement with low-frequency component suppression enhances feature definition is shown to be correct and to lead to clear-featured images that could change previously held assumptions about the cell-cell interactions present. Clear feature definition of cells on scaffolds extends the usefulness of AFM imaging for use in regenerative medicine. © Wiley Periodicals, Inc.

  4. Composition and structure of fresh ammonia clouds on Jupiter based on quantitative analysis of Galileo/NIMS and New Horizons/LEISA spectra

    NASA Astrophysics Data System (ADS)

    Sromovsky, L. A.; Fry, P. M.

    2018-06-01

    Ammonia gas has long been assumed to be the main source of condensables for the upper cloud layer on Jupiter, but distinctive spectral features associated with ammonia have been seen only rarely. Since both ammonia and NH4SH absorb in the 3 μm region, and widespread absorption in the 3 μm region was present (Sromovsky and Fry, 2010), identification of the 2 μm absorption feature of NH3 provided an opportunity to clearly establish its presence in Jovian clouds. Baines et al. (2002) succeeded in finding in Near Infrared Mapping Spectrometer (NIMS) observations one feature that had both 2 μm and 3 μm absorption, and many which were known to have absorption at 2.73 μm. They named these Spectrally Identifiable Ammonia Clouds (SIACs). They also argued that these were fresh ammonia clouds that would eventually succumb to some process that would obscure their absorption features. Detection of many more of the 2 μm features was later achieved by New Horizon's Linear Etalon Imaging Spectral Array (LEISA) instrument, which provided both the spatial and spectral resolution needed to identify these features. Here we report on the first quantitative modeling that uses NIMS spectra over a broad (1-5.2 μm) spectral range and LEISA spectra over a much narrower (1.25-2.5 μm) spectral range to constrain the cloud structure and composition of these rare cloud features and compare them to background clouds. We find that the absorption signature at 2 μm, which is well characterized in LEISA spectra, is relatively subtle and easily matched by model clouds containing spherical particles of ammonia ice with radii of 2-4 μm. The NIMS spectra, which cover both reflected sunlight as well as thermal emission regions are more difficult to model with cloud materials plausibly present in Jupiter's atmosphere. The best signal/noise spectra obtained from NIMS provide a relatively sparse sampling of the spectrum, which does not establish the detailed shape of the 3 μm absorption region. NIMS SIAC spectra with much denser spectral sampling are limited by much higher noise levels that degrade the features that are key to identifying cloud composition. The structure which best matches the wide range NIMS SIAC spectra contains two overlapping NH3 clouds with a bi-modal size distribution over an optically thick NH4SH cloud. The bi-modal distribution may be a result of modeling non-spherical, possibly fractal aggregate, particles with spheres.

  5. Investigating Hydroxyl at Asteroid 951 Gaspra

    NASA Astrophysics Data System (ADS)

    Granahan, James C.

    2015-11-01

    Recent investigations [Granahan, 2011; 2014] of Galileo Near Infrared Mapping Spectrometer (NIMS) observations of asteroid 951 Gaspra have detected an infrared absorption feature near 2.8 micrometers. These were detected in NIMS data acquired by the Galileo spacecraft on October 29, 1991 at wavelengths ranging from 0.7 - 5.2 micrometers [Carlson et al., 1992]. This abstract presents a summary of the investigation to identify the material creating the 2.8 micrometer spectral absorption feature. The current best match for the observed 951 Gaspra feature is the phyllosilicate bound hydroxyl signature present in a thermally desiccated QUE 99038 carbonaceous chondrite as measured by Takir et al. [2013].The 951 Gaspra absorption feature has been compared to a variety of hydroxyl bearing signatures. Many phyllosilicates, hydroxyl bearing minerals, have absorption minima at different positions (2.7 or 2.85 micrometers). It also differs from similar absorptions in a potential R chondrite analog, LAP 04840. The spectra LAP 04840 has a 2.7 micrometer feature due to biotite and a 2.9 micrometer feature due to adsorbed water [Klima et al., 2007]. 2.8 micrometer absorption minima have been found for adsorbed hydroxyl on the Moon [McCord et al., 2011] and various carbonaceous chondrites [Calvin and King, 1997; Takir et al., 2013]. The best match, with a minimum Euclidean distance difference to the 951 Gaspra feature, is found in the spectrum of QUE 99038 [Takir et al., 2013]. This spectrum is the product of an infrared measurement of a sample that had its adsorbed water baked off and removed in a vacuum chamber. The remaining hydroxyl in the sample belongs to a mixture of phyllosilicates dominated by the presence of cronstedtite.References: Calvin, W. M., and T. V. King (1997), Met. Planet. Sci., 32, 693-702. Carlson, R. W., et al. (1992), Bull. American Astro. Soc., 24, 932. Granahan, J. C. (2011), Icarus, 213, 265-272. Granahan, J. C. (2014), 45th LPSC, #1092. Klima, R., C. et al. (2007), 38th LPSC, #1710. McCord, T. B., et al. (2011), JGR, 116, E00G05. Takir, D., et al. (2013), Met. Planet. Sci., 48, 1618-1637.

  6. IUE detector saturation and the new 2800 A absorption feature 'discovered' by Karim, Hoyle, and Wickramasinghe

    NASA Astrophysics Data System (ADS)

    Savage, B. D.; Sitko, M. L.

    1984-03-01

    The 2800 A feature of Karim et al. (1983) is shown to be the result of IUE detector saturation effects in overexposed spectra. A properly exposed spectrum and an overexposed one are shown. The latter shows a broad absorption peak at 2800 A while the former does not.

  7. Investigations on the 1.7 micron residual absorption feature in the vegetation reflection spectrum

    NASA Technical Reports Server (NTRS)

    Verdebout, J.; Jacquemoud, S.; Andreoli, G.; Hosgood, B.; Sieber, A.

    1993-01-01

    The detection and interpretation of the weak absorption features associated with the biochemical components of vegetation is of great potential interest to a variety of applications ranging from classification to global change studies. This recent subject is also challenging because the spectral signature of the biochemicals is only detectable as a small distortion of the infrared spectrum which is mainly governed by water. Furthermore, the interpretation is complicated by complexity of the molecules (lignin, cellulose, starch, proteins) which contain a large number of different and common chemical bonds. In this paper, we present investigations on the absorption feature centered at 1.7 micron; these were conducted both on AVIRIS data and laboratory reflectance spectra of leaves.

  8. Laser-induced plasma characterization through self-absorption quantification

    NASA Astrophysics Data System (ADS)

    Hou, JiaJia; Zhang, Lei; Zhao, Yang; Yan, Xingyu; Ma, Weiguang; Dong, Lei; Yin, Wangbao; Xiao, Liantuan; Jia, Suotang

    2018-07-01

    A self-absorption quantification method is proposed to quantify the self-absorption degree of spectral lines, in which plasma characteristics including electron temperature, elemental concentration ratio, and absolute species number density can be deduced directly. Since there is no spectral intensity involved in the calculation, the analysis results are independent of the self-absorption effects and the additional spectral efficiency calibration is not required. In order to evaluate the practicality, the limitation for application and the precision of this method are also discussed. Experimental results of aluminum-lithium alloy prove that the proposed method is qualified to realize semi-quantitative measurements and fast plasma characteristics diagnostics.

  9. Applications of absorption spectroscopy using quantum cascade lasers.

    PubMed

    Zhang, Lizhu; Tian, Guang; Li, Jingsong; Yu, Benli

    2014-01-01

    Infrared laser absorption spectroscopy (LAS) is a promising modern technique for sensing trace gases with high sensitivity, selectivity, and high time resolution. Mid-infrared quantum cascade lasers, operating in a pulsed or continuous wave mode, have potential as spectroscopic sources because of their narrow linewidths, single mode operation, tunability, high output power, reliability, low power consumption, and compactness. This paper reviews some important developments in modern laser absorption spectroscopy based on the use of quantum cascade laser (QCL) sources. Among the various laser spectroscopic methods, this review is focused on selected absorption spectroscopy applications of QCLs, with particular emphasis on molecular spectroscopy, industrial process control, combustion diagnostics, and medical breath analysis.

  10. Near-Infrared Band Strengths of Molecules Diluted in N2 and H20 Ice Mixtures Relevant to Interstellar and Planetary Ices

    NASA Technical Reports Server (NTRS)

    Richey, C. R.; Richey, Christina R.

    2012-01-01

    In order to determine the column density of a component of an ice from its infrared absorption features, the strengths of these features must be known. The peak positions, widths, profiles, and strengths of a certain ice component's infrared absorption features are affected be the overall composition of the ice. Many satellites within the solar system have surfaces that are dominated by H2O or N2 and ices in the interstellar medium (ISM) are primarily composed of H2O. The experiments presented here focus on the near-infrared absorption features of CO, CO2, CH4, and NH3 (nu=10,000-4,000/cm, lambda=1-2.5 microns) and the effects of diluting these molecules in N2 or H2O ice (mixture ratio of 5:1). This is a continuation of previous results published by our research group.

  11. The Hypercalciurias CAUSES, PARATHYROID FUNCTIONS, AND DIAGNOSTIC CRITERIA

    PubMed Central

    Pak, Charles Y. C.; Ohata, Masahiro; Lawrence, E. Clint; Snyder, W.

    1974-01-01

    The causes for the hypercalciuria and diagnostic criteria for the various forms of hypercalciuria were sought in 56 patients with hypercalcemia or nephrolithiasis (Ca stones), by a careful assessment of parathyroid function and calcium metabolism. A study protocol for the evaluation of hypercalciuria, based on a constant liquid synthetic diet, was developed. In 26 cases of primary hyperparathyroidism, characteristic features were: hypercalcemia, high urinary cyclic AMP (cAMP, 8.58±3.63 SD μmol/g creatinine; normal, 4.02±0.70 μmol/g creatinine), high immunoreactive serum parathyroid hormone (PTH), hypercalciuria, the urinary Ca exceeding absorbed Ca from intestinal tract (CaA), high fasting urinary Ca (0.2 mg/mg creatinine or greater), and low bone density by 125I photon absorption. The results suggest that hypercalciuria is partly secondary to an excessive skeletal resorption (resorptive hypercalciuria). The 22 cases with renal stones had normocalcemia, hypercalciuria, intestinal hyperabsorption of calcium, normal or low serum PTH and urinary cAMP, normal fasting urinary Ca, and normal bone density. Since their CaA exceeded urinary Ca, the hypercalciuria probably resulted from an intestinal hyperabsorption of Ca (absorptive hypercalciuria). The primacy of intestinal Ca hyperabsorption was confirmed by responses to Ca load and deprivation under a metabolic dietary regimen. During a Ca load of 1,700 mg/day, there was an exaggerated increase in the renal excretion of Ca and a suppression of cAMP excretion. The urinary Ca of 453±154 SD mg/day was significantly higher than the control group's 211±42 mg/day. The urinary cAMP of 2.26±0.56 μmol/g creatinine was significantly lower than in the control group. In contrast, when the intestinal absorption of calcium was limited by cellulose phosphate, the hypercalciuria was corrected and the suppressed renal excretion of cAMP returned towards normal. Two cases with renal stones had normocalcemia, hypercalciuria, and high urinary cAMP or serum PTH. Since CaA was less than urinary Ca, the hypercalciuria may have been secondary to an impaired renal tubular reabsorption of Ca (renal hypercalciuria). Six cases with renal stones had normal values of serum Ca, urinary Ca, urinary cAMP, and serum PTH (normocalciuric nephrolithiasis). Their CaA exceeded urinary Ca, and fasting urinary Ca and bone density were normal. The results support the proposed mechanisms for the hypercalciuria and provide reliable diagnostic criteria for the various forms of hypercalciuria. PMID:4367891

  12. The way to universal and correct medical presentation of diagnostic informations for complex spectrophotometry noninvasive medical diagnostic systems

    NASA Astrophysics Data System (ADS)

    Rogatkin, Dmitrii A.; Tchernyi, Vladimir V.

    2003-07-01

    The optical noninvasive diagnostic systems are now widely applied and investigated in different areas of medicine. One of the such techniques is the noninvasive spectrophotometry, the complex diagnostic technique consisting on elastic scattering spectroscopy, absorption spectroscopy, fluorescent diagnostics, photoplethismography, etc. Today a lot of real optical diagnostic systems indicate the technical parameters and physical data only as a result of the diagnostic procedure. But, it is clear that for the medical staff the more convenient medical information is needed. This presentation lights the general way for development a diagnostic system"s software, which can produce the full processing of the diagnostic data from a physical to a medical level. It is shown, that this process is a multilevel (3-level) procedure and the main diagnostic result for noninvasive spectrophotometry methods, the biochemical and morphological composition of the tested tissues, arises in it on a second level of calculations.

  13. The use of surface enhanced absorption, scattering and catalytic properties of gold nanoparticles in some bio- and biomedical applications

    NASA Astrophysics Data System (ADS)

    Huang, Xiaohua; El-Sayed, Ivan H.; El-Sayed, Mostafa A.

    2005-08-01

    Gold nanoparticles with unique optical properties offer useful applications in biotechnology. In this article two applications that we have developed are summarized, in one they are used in cancer cell diagnostics and in the other they are found to have catalytic property for the NADH oxidation reaction which is important in ATP formations. By conjugation with anti-EGFR antibodies which specifically target EGFR that are usually overexpressed on most cancer cells, gold nanoparticles are used as a molecular contrast agent for cancer cell diagnostics using their both strong surface plasmon absorption and efficient Mie scattering properties. Au nanoparticles are also good catalysts for many reactions due to their high surface to volume ratio. Au nanoparticles are found to be the catalyst for the NADH oxidation reaction. This was studied by monitoring the effect of the nanoparticles on NADH fluorescence intensity and lifetime as well as the change of the surface plasmon absorption band during the reaction.

  14. Large-scale gas dynamical processes affecting the origin and evolution of gaseous galactic halos

    NASA Technical Reports Server (NTRS)

    Shapiro, Paul R.

    1991-01-01

    Observations of galactic halo gas are consistent with an interpretation in terms of the galactic fountain model in which supernova heated gas in the galactic disk escapes into the halo, radiatively cools and forms clouds which fall back to the disk. The results of a new study of several large-scale gas dynamical effects which are expected to occur in such a model for the origin and evolution of galactic halo gas will be summarized, including the following: (1) nonequilibrium absorption line and emission spectrum diagnostics for radiatively cooling halo gas in our own galaxy, as well the implications of such absorption line diagnostics for the origin of quasar absorption lines in galactic halo clouds of high redshift galaxies; (2) numerical MHD simulations and analytical analysis of large-scale explosions ad superbubbles in the galactic disk and halo; (3) numerical MHD simulations of halo cloud formation by thermal instability, with and without magnetic field; and (4) the effect of the galactic fountain on the galactic dynamo.

  15. Feature construction can improve diagnostic criteria for high-dimensional metabolic data in newborn screening for medium-chain acyl-CoA dehydrogenase deficiency.

    PubMed

    Ho, Sirikit; Lukacs, Zoltan; Hoffmann, Georg F; Lindner, Martin; Wetter, Thomas

    2007-07-01

    In newborn screening with tandem mass spectrometry, multiple intermediary metabolites are quantified in a single analytical run for the diagnosis of fatty-acid oxidation disorders, organic acidurias, and aminoacidurias. Published diagnostic criteria for these disorders normally incorporate a primary metabolic marker combined with secondary markers, often analyte ratios, for which the markers have been chosen to reflect metabolic pathway deviations. We applied a procedure to extract new markers and diagnostic criteria for newborn screening to the data of newborns with confirmed medium-chain acyl-CoA dehydrogenase deficiency (MCADD) and a control group from the newborn screening program, Heidelberg, Germany. We validated the results with external data of the screening center in Hamburg, Germany. We extracted new markers by performing a systematic search for analyte combinations (features) with high discriminatory performance for MCADD. To select feature thresholds, we applied automated procedures to separate controls and cases on the basis of the feature values. Finally, we built classifiers from these new markers to serve as diagnostic criteria in screening for MCADD. On the basis of chi(2) scores, we identified approximately 800 of >628,000 new analyte combinations with superior discriminatory performance compared with the best published combinations. Classifiers built with the new features achieved diagnostic sensitivities and specificities approaching 100%. Feature construction methods provide ways to disclose information hidden in the set of measured analytes. Other diagnostic tasks based on high-dimensional metabolic data might also profit from this approach.

  16. Plant phenolics and absorption features in vegetation reflectance spectra near 1.66 μm

    USGS Publications Warehouse

    Kokaly, Raymond F.; Skidmore, Andrew K

    2015-01-01

    Past laboratory and field studies have quantified phenolic substances in vegetative matter from reflectance measurements for understanding plant response to herbivores and insect predation. Past remote sensing studies on phenolics have evaluated crop quality and vegetation patterns caused by bedrock geology and associated variations in soil geochemistry. We examined spectra of pure phenolic compounds, common plant biochemical constituents, dry leaves, fresh leaves, and plant canopies for direct evidence of absorption features attributable to plant phenolics. Using spectral feature analysis with continuum removal, we observed that a narrow feature at 1.66 μm is persistent in spectra of manzanita, sumac, red maple, sugar maple, tea, and other species. This feature was consistent with absorption caused by aromatic C-H bonds in the chemical structure of phenolic compounds and non-hydroxylated aromatics. Because of overlapping absorption by water, the feature was weaker in fresh leaf and canopy spectra compared to dry leaf measurements. Simple linear regressions of feature depth and feature area with polyphenol concentration in tea resulted in high correlations and low errors (% phenol by dry weight) at the dry leaf (r2 = 0.95, RMSE = 1.0%, n = 56), fresh leaf (r2 = 0.79, RMSE = 2.1%, n = 56), and canopy (r2 = 0.78, RMSE = 1.0%, n = 13) levels of measurement. Spectra of leaves, needles, and canopies of big sagebrush and evergreens exhibited a weak absorption feature centered near 1.63 μm, short ward of the phenolic compounds, possibly consistent with terpenes. This study demonstrates that subtle variation in vegetation spectra in the shortwave infrared can directly indicate biochemical constituents and be used to quantify them. Phenolics are of lesser abundance compared to the major plant constituents but, nonetheless, have important plant functions and ecological significance. Additional research is needed to advance our understanding of the spectral influences of plant phenolics and terpenes relative to dominant leaf biochemistry (water, chlorophyll, protein/nitrogen, cellulose, and lignin).

  17. Laser-Based Diagnostics for Transient Species in Hydrocarbon Flames

    DTIC Science & Technology

    1989-12-01

    Year , Monek Daey) IS. PAGE COUNT PniIFROM ll/R TO--UR 1 90R 236 16. SUPPLEMENTARY NOTATION 17. COSATI CODES 1S. SUBJECT TERMS (Comnwiu on rewew if...chemical mechanism is to apply species specific diagnostic methods directly to the combustion system of interest. In the past , most optical diagnostic...of the two important radicals HCO and C2H by LIF or absorption methods is several years in the future and will require futher basic studies

  18. Wavelength feature mapping as a proxy to mineral chemistry for investigating geologic systems: An example from the Rodalquilar epithermal system

    NASA Astrophysics Data System (ADS)

    van der Meer, Freek; Kopačková, Veronika; Koucká, Lucie; van der Werff, Harald M. A.; van Ruitenbeek, Frank J. A.; Bakker, Wim H.

    2018-02-01

    The final product of a geologic remote sensing data analysis using multi spectral and hyperspectral images is a mineral (abundance) map. Multispectral data, such as ASTER, Landsat, SPOT, Sentinel-2, typically allow to determine qualitative estimates of what minerals are in a pixel, while hyperspectral data allow to quantify this. As input to most image classification or spectral processing approach, endmembers are required. An alternative approach to classification is to derive absorption feature characteristics such as the wavelength position of the deepest absorption, depth of the absorption and symmetry of the absorption feature from hyperspectral data. Two approaches are presented, tested and compared in this paper: the 'Wavelength Mapper' and the 'QuanTools'. Although these algorithms use a different mathematical solution to derive absorption feature wavelength and depth, and use different image post-processing, the results are consistent, comparable and reproducible. The wavelength images can be directly linked to mineral type and abundance, but more importantly also to mineral chemical composition and subtle changes thereof. This in turn allows to interpret hyperspectral data in terms of mineral chemistry changes which is a proxy to pressure-temperature of formation of minerals. We show the case of the Rodalquilar epithermal system of the southern Spanish Gabo de Gata volcanic area using HyMAP airborne hyperspectral images.

  19. Clinical and diagnostic features of delayed hypoxic leukoencephalopathy.

    PubMed

    Shprecher, David R; Flanigan, Kevin M; Smith, A Gordon; Smith, Shawn M; Schenkenberg, Thomas; Steffens, John

    2008-01-01

    Delayed hypoxic leukoencephalopathy is an underrecognized syndrome of delayed demyelination, which is important to consider when delayed onset of neuropsychiatric symptoms follows a hypoxic event. The authors describe clinical and diagnostic features of three such cases, review the pathophysiology of delayed hypoxic leukoencephalopathy, and discuss features which may help distinguish it from toxic leukoencephalopathy.

  20. Development of Detailed and Reduced Kinetics Mechanisms for Surrogates of Petroleum-Derived and Synthetic Jet Fuels

    DTIC Science & Technology

    2011-02-28

    Meeting of Combustion, Atlanta, Georgia, paper 2A18, March 20-23, 2011. 9.2 Web Releases Sirjean, B., Dames, A., Sheen, D.A., You, X.-Q., Sung, C...was no significant interfering absorption or emission. IR diode laser absorption of CO2 and H2O: The recent commercial availability of DFB...distributed feedback) IR diode lasers in the wavelength vicinity of 2.5-2.7 microns has allowed the development of a new CO2 and H2O absorption diagnostics

  1. Brownian motion curve-based textural classification and its application in cancer diagnosis.

    PubMed

    Mookiah, Muthu Rama Krishnan; Shah, Pratik; Chakraborty, Chandan; Ray, Ajoy K

    2011-06-01

    To develop an automated diagnostic methodology based on textural features of the oral mucosal epithelium to discriminate normal and oral submucous fibrosis (OSF). A total of 83 normal and 29 OSF images from histopathologic sections of the oral mucosa are considered. The proposed diagnostic mechanism consists of two parts: feature extraction using Brownian motion curve (BMC) and design ofa suitable classifier. The discrimination ability of the features has been substantiated by statistical tests. An error back-propagation neural network (BPNN) is used to classify OSF vs. normal. In development of an automated oral cancer diagnostic module, BMC has played an important role in characterizing textural features of the oral images. Fisher's linear discriminant analysis yields 100% sensitivity and 85% specificity, whereas BPNN leads to 92.31% sensitivity and 100% specificity, respectively. In addition to intensity and morphology-based features, textural features are also very important, especially in histopathologic diagnosis of oral cancer. In view of this, a set of textural features are extracted using the BMC for the diagnosis of OSF. Finally, a textural classifier is designed using BPNN, which leads to a diagnostic performance with 96.43% accuracy. (Anal Quant

  2. Classification by diagnosing all absorption features (CDAF) for the most abundant minerals in airborne hyperspectral images

    NASA Astrophysics Data System (ADS)

    Mobasheri, Mohammad Reza; Ghamary-Asl, Mohsen

    2011-12-01

    Imaging through hyperspectral technology is a powerful tool that can be used to spectrally identify and spatially map materials based on their specific absorption characteristics in electromagnetic spectrum. A robust method called Tetracorder has shown its effectiveness at material identification and mapping, using a set of algorithms within an expert system decision-making framework. In this study, using some stages of Tetracorder, a technique called classification by diagnosing all absorption features (CDAF) is introduced. This technique enables one to assign a class to the most abundant mineral in each pixel with high accuracy. The technique is based on the derivation of information from reflectance spectra of the image. This can be done through extraction of spectral absorption features of any minerals from their respected laboratory-measured reflectance spectra, and comparing it with those extracted from the pixels in the image. The CDAF technique has been executed on the AVIRIS image where the results show an overall accuracy of better than 96%.

  3. Integration of basic sciences and clinical sciences in oral radiology education for dental students.

    PubMed

    Baghdady, Mariam T; Carnahan, Heather; Lam, Ernest W N; Woods, Nicole N

    2013-06-01

    Educational research suggests that cognitive processing in diagnostic radiology requires a solid foundation in the basic sciences and knowledge of the radiological changes associated with disease. Although it is generally assumed that dental students must acquire both sets of knowledge, little is known about the most effective way to teach them. Currently, the basic and clinical sciences are taught separately. This study was conducted to compare the diagnostic accuracy of students when taught basic sciences segregated or integrated with clinical features. Predoctoral dental students (n=51) were taught four confusable intrabony abnormalities using basic science descriptions integrated with the radiographic features or taught segregated from the radiographic features. The students were tested with diagnostic images, and memory tests were performed immediately after learning and one week later. On immediate and delayed testing, participants in the integrated basic science group outperformed those from the segregated group. A main effect of learning condition was found to be significant (p<0.05). The results of this study support the critical role of integrating biomedical knowledge in diagnostic radiology and shows that teaching basic sciences integrated with clinical features produces higher diagnostic accuracy in novices than teaching basic sciences segregated from clinical features.

  4. Hypersonic Wake Diagnostics Using Laser Induced Fluorescence Techniques

    NASA Technical Reports Server (NTRS)

    Mills, Jack L.; Sukenik, Charles I.; Balla, Robert J.

    2011-01-01

    A review of recent research performed in iodine that involves a two photon absorption of light at 193 nm will be discussed, and it's potential application to velocimetry measurements in a hypersonic flow field will be described. An alternative seed atom, Krypton, will be presented as a good candidate for performing nonintrusive hypersonic flow diagnostics. Krypton has a metastable state with a lifetime of approximately 43 s which would prove useful for time of flight measurement (TOF) and a sensitivity to collisions that can be utilized for density measurements. Calculations using modest laser energies and experimental values show an efficiency of excited state production to be on the order of 10(exp -6) for a two photon absorption at 193 nm.

  5. Hydrothermal alteration mapping using ASTER data in Baogutu porphyry deposit, China

    NASA Astrophysics Data System (ADS)

    Li, Q.; Zhang, B.; Lu, L.; Lin, Q.

    2014-03-01

    Remote sensing plays an important role in mineral exploration. One of its proven applications is extracting host-rock lithology and alteration zones that are related to porphyry copper deposits. An Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) was used to map the Baogutu porphyry deposit alteration area. A circular alteration mineral zoning pattern was clearly observed in the classification result of potassic, phyllic, argillic, propylitic zones. The potassic is characterized by biotite and anhydrite with an absorption feature centered at 1.94 and 2.1um. The phyllic zone is characterized by illite and sericite that indicates an intense Al-OH absorption feature centered at 2.20um. The narrower argillic zone including kaolinite and alunite displays a secondary Al-OH absorption feature at 2.17 um. The mineral assemblages of the outer propylitic zone are epidote, chlorite and calcite that exhibit absorption features at 2.335um.The performance of Principal Component Analysis(PCA), Minimum Noise Fraction (MNF), band ratio(BR) and Constrained Energy Minimization(CEM) has been evaluated. These techniques identified new prospects of porphyry copper mineralization in the study areas. These results indicate that ASTER is a powerful tool in the initial steps of mineral exploration.

  6. Negative Searches for Evidence of Aqueous Alteration on Asteroid Surfaces

    NASA Technical Reports Server (NTRS)

    Vilas, F.

    2005-01-01

    Small bodies in the Solar System preserve evidence of the processes occurring during early Solar System formation, unlike the larger planets that undergo continuous churning of their surfaces. We study these bodies to understand what processes affected different stages of Solar System formation. The action of aqueous alteration (the alteration of material by the interaction of that material with liquid formed by the melting of incorporated ice) of near-subsurface material has been inferred to occur on many asteroids based on the spectrophotometric evidence of phyllosilicates and iron alteration minerals. The definitive indication of aqueous alteration is the 3.0- micron absorption feature attributed to structural hydroxyl (OH) and interlayer and adsorbed water (H2O) in phyllosilicates (clays) (hereafter water of hydration). A weak absorption feature centered near 0.7 microns attributed to an Fe (2+) right arrow Fe (3+) charge transfer transition in oxidized iron in phyllosilicates has been observed in the reflectance spectra and photometry of approximately 50% of the main-belt C-class asteroids. An approximately 85% correlation between this 0.7- micron feature and the 3.0- micron water of hydration absorption feature was found among the low-albedo asteroids. The feature is usually centered near 0.68 microns in asteroid spectra, and ranges in wavelength from approximately 0.57 to 0.83 microns. Serendipitously, three of the Eight Color Asteroid Survey filters the v (0.550 microns), w (0.701 microns), and x (0.853 microns)-bracket this feature well, and can be used to determine the presence of this feature in the reflectance properties of an asteroid, and probe the aqueous alteration history of larger samples of asteroid data. Two efforts to search for evidence of aqueous alteration based on the presence of this 0.7- micron absorption feature are presented here.

  7. Plasma Radiation Source Development Program

    DTIC Science & Technology

    2006-03-01

    shell mass distributions perform belter than thin shells. The dual plenum, double shell load has unique diagnostic features that enhance our...as implosion time increases. 13. SUBJECT TERMS Zpinch x-ray diagnostics Rayleigh-Taylor instability pulsed-power x-ray spectroscopy supersonic...feature permits some very useful diagnostics that shed light on critical details of the implosion process. See Section 3 for details. We have

  8. Complex Resonance Absorption Structure in the X-Ray Spectrum of IRAS 13349+2438

    NASA Technical Reports Server (NTRS)

    Sako, M.; Kahn, S. M.; Behar, E.; Kaastra, J. S.; Brinkman, A. C.; Boller, Th.; Puchnarewicz, E. M.; Starling, R.; Liedahl, D. A.; Clavel, J.

    2000-01-01

    The luminous infrared-loud quasar IRAS 13349+2438 was observed with the XMM - Newton Observatory as part of the Performance Verification program. The spectrum obtained by the Reflection Grating Spectrometer (RGS) exhibits broad (FWHM - 1400 km/s) absorption lines from highly ionized elements including hydrogen- and helium-like carbon, nitrogen, oxygen, and neon, and several iron L - shell ions (Fe XVII - XX). Also shown in the spectrum is the first astrophysical detection of a broad absorption feature around lambda = 16 - 17 A identified as an unresolved transition array (UTA) of 2p - 3d inner-shell absorption by iron M-shell ions in a much cooler medium; a feature that might be misidentified as an O VII edge when observed with moderate resolution spectrometers. No absorption edges are clearly detected in the spectrum. We demonstrate that the RGS spectrum of IRAS 13349+2438 exhibits absorption lines from two distinct regions, one of which is tentatively associated with the medium that produces the optical/UV reddening.

  9. Diagnostics development for E-beam excited air channels

    NASA Astrophysics Data System (ADS)

    Eckstrom, D. J.; Dickenson, J. S.

    1982-02-01

    As the tempo of development of particle beam weapons increases, more detailed diagnostics of the interaction of the particle beam with the atmosphere are being proposed and implemented. Some of these diagnostics involve probing of the excited air channel with visible wavelength laser radiation. Examples include the use of visible wavelength interferometry to measure electron density profiles in the nose of the beam Ri81 and Stark shift measurements to determine self-induced electric fields Hi81, DR81. In these diagnostics, the change in laser intensity due to the desired diagnostic effect can be quite small, leading to the possibility that other effects, such as gas phase absorption, could seriously interfere with the measurement.

  10. VNIR reflectance spectroscopy of glassy igneous material with variable oxidation states

    NASA Astrophysics Data System (ADS)

    Carli, Cristian; Di Genova, Danilo; Roush, Ted L.; Ertel-Ingrisch, Werner; Capaccioni, Fabrizio; Dingwell, Donald B.

    2017-04-01

    Silicate glasses with igneous compositions may represent an abundant component of planetary surface material via effusive volcanism or impact cratering processes. Several planetary surfaces are mapped with hyper-spectrometers in the visible and near-infrared (VNIR). In this spectral range, crystal field (C.F.) absorptions are useful to discriminate iron-bearing silicate components. At the same time, in the VNIR reflectance spectroscopy iron bearing glasses may exhibit a C.F. absorption at ˜1.1 μm. A weak C.F. absorption is also present at ˜1.9 μm. These absorptions can be therefore diagnostic for glassy component and can also affect the C.F. absorptions of mafic minerals when mixed in the regolith. So far, few studies investigated the spectral properties of systematic glasses compositions and at different oxygen fucacity. For these reasons studying glassy materials, and their optical constants, represents an important effort to document and to interpret, spectral features of Solar System silicate crusts where glasses are present, but may be difficult to map. In previous work Carli et al. (2016) considered the composition of glassy igneous materials produced in Earth-like atmospheric conditions (i.e. oxidized conditions). Here, we expand on that effort by including glasses formed under more reducing condition. In this study, glasses were produced at -9.3 log fO2 and 1400 ˚ C for a duration of 4 h at the Department of Earth and Environmental Sciences at the University of Munich using a gas-mixing furnace. The major element composition, sample homogeneity, and the Fe3+/Fetot. ratio of run products were analytically determined. Moreover, Raman spectra of the same samples were also acquired. Afterwards, powders were produced with nine-grain size from 250-224 μm to 50-20 μm and measured in bidirectional reflectance at Spectroscopy LABoratory (IAPS-INAF, Rome). Reflectance spectra were acquired from 0.35 to 2.5 μm with a Field-Pro Spectrometer mounted on a goniometer. Spectra were obtained with incident and emission angles of 30˚ and 0˚ , respectively. Spectra showed both diagnostic bands, reflectance diminished with increasing iron abundance. The comparison with spectra collected from samples sythetized at "Earth-like" atmospheric conditions showed: 1) Relatively higher reflectance in the visible; 2) less red slope in the IR; 3) deeper 1.1 μm absorption band. Following Carli et al. (2016, Icarus), for all the spectra acquired at each grain size, we apply the radiative transfer model to estimate the optical constant as a wavelength's function. Finally, we will report the retrieved optical constants for our samples and we will compare them with those obtained from the same composition but at "Earth-like" atmospheric conditions. Reference: Carli et al. 2016, Icarus, doi:10.1016/j.icarus.2015.10.032.

  11. Chemometric analysis of correlations between electronic absorption characteristics and structural and/or physicochemical parameters for ampholytic substances of biological and pharmaceutical relevance.

    PubMed

    Judycka-Proma, U; Bober, L; Gajewicz, A; Puzyn, T; Błażejowski, J

    2015-03-05

    Forty ampholytic compounds of biological and pharmaceutical relevance were subjected to chemometric analysis based on unsupervised and supervised learning algorithms. This enabled relations to be found between empirical spectral characteristics derived from electronic absorption data and structural and physicochemical parameters predicted by quantum chemistry methods or phenomenological relationships based on additivity rules. It was found that the energies of long wavelength absorption bands are correlated through multiparametric linear relationships with parameters reflecting the bulkiness features of the absorbing molecules as well as their nucleophilicity and electrophilicity. These dependences enable the quantitative analysis of spectral features of the compounds, as well as a comparison of their similarities and certain pharmaceutical and biological features. Three QSPR models to predict the energies of long-wavelength absorption in buffers with pH=2.5 and pH=7.0, as well as in methanol, were developed and validated in this study. These models can be further used to predict the long-wavelength absorption energies of untested substances (if they are structurally similar to the training compounds). Copyright © 2014 Elsevier B.V. All rights reserved.

  12. Detection of H I absorption in the dwarf galaxy Haro 11

    NASA Astrophysics Data System (ADS)

    MacHattie, Jeremy A.; Irwin, Judith A.; Madden, Suzanne C.; Cormier, Diane; Rémy-Ruyer, Aurélie

    2014-02-01

    We present the results of an analysis of archival 21 cm (H I) data of the blue compact dwarf galaxy Haro 11 (ESO 350-IG038). Observations were obtained at the Very Large Array, and the presence of a compact absorption feature near the optical centre of the galaxy has been detected. The central location of the absorption feature coincides with the centre of the continuum background of the galaxy, as well as with the location of knot B. The absorption feature yields an H I mass in the range of 3-10 × 108 M⊙, corresponding to spin temperatures from 91 K to 200 K, respectively. The absence of H I seen in emission places an upper limit of 1.7 × 109 M⊙ on the mass. To our knowledge this is the first example of a dwarf galaxy that shows H I absorption from its own background continuum. The continuum emission from the galaxy is also used to determine star formation rates, namely 6.85 ± 0.05 M⊙ yr-1 (for a stellar mass range of 5 M⊙ < M < 100 M⊙), or 32.8 ± 0.2 M⊙ yr-1 (for an extended range of 0.1 M⊙ < M < 100 M⊙).

  13. The widetilde{A}←widetilde{X} ABSORPTION SPECTRUM OF 2-NITROOXYBUTYL PEROXY RADICAL

    NASA Astrophysics Data System (ADS)

    Eddingsaas, Nathan; Takematsu, Kana; Okumura, Mitchio

    2009-06-01

    The nitrate radical is an important atmospheric oxidant in the nighttime sky. Nitrate radicals react by addition to alkenes, and in the presence of oxygen form nitrooxyalkyl peroxy radicals. The peroxy radical formed from the reaction of 2-butene, nitrate radical, and oxygen was detected by cavity ringdown spectroscopy (CRDS) via its widetilde{A}←widetilde{X} electronic absorption spectrum. The widetilde{A}←widetilde{X} electronic transition is a bound-bound transition with enough structure to distinguish between different peroxy radicals as well as different conformers of the same peroxy radical. Two conformers of the nitrooxybutyl peroxy radical have been observed; the absorption features are red shifted from the same absorption features of sec-butyl peroxy radical. Calculations on the structure of nitrooxyalkyl peroxy radicals and general trends of the position of the widetilde{A}←widetilde{X} absorption transitions have also been performed and compared to those of unsubstituted peroxy radicals.

  14. Interstellar proteins and the discovery of a new absorption feature at lambda = 2800 A

    NASA Astrophysics Data System (ADS)

    Karim, L. M.; Hoyle, F.; Wickramasinghe, N. C.

    1983-07-01

    In order to check the presence of biogenic materials in interstellar grains, the spectra of three early-type, heavily reddened stars recorded by the IUE were examined. These stars showed comparatively weak absorption at 2200 A, minimizing the effect of graphite grains. A broad absorption feature centered on 2800 A is discovered in HD 14250 and interpreted to be due to the amino acid tryptophan. Comparison of the spectrum with that of the calculated extinction behavior of graphite spheres of radii 0.02 microns suggests that the latter are not responsible for the observed spectrum.

  15. Follow-up FOCAS Spectroscopy for [O iii] Blobs at z 0.7

    NASA Astrophysics Data System (ADS)

    Yuma, Suraphong

    2014-01-01

    We propose FOCAS spectroscopy for our eight newly selected [O_iii] blobs at z~0.7, showing remarkably extended [O_iii] emission larger than 30 kpc down to 1.2x10^{-18} erg^{-1}cm^{-2} arcsec^{-2} in continuum-subtracted narrowband images. This extended oxygen nebulae beyond stellar component is thought to be hot metal-right gas outflowing from galaxies. However, without spectroscopy to verify gas motion of the system, we cannot certainly conclude that the extended feature of [O_iii] emission is caused by gas outflow. With FOCAS, we expect to observe Fe_ii, Mg_ii absorption lines and [O_ii}], Hbeta, and [O_iii] emission lines, which all fall into optical window at this redshift. We will 1) confirm the outflow of these blobs through Fe_ii and/or Mg_ii absorption lines, 2) constrain energy source of the outflow (AGN or stellar feedback) through line-ratio diagnostic diagram, and 3) for the first time investigate if the extended oxygen emission is just due to the photo-ionized outflowing gas or involving shock heating process through [O_ii]/[O_iii] ratios in extended regions. The last goal can only be accomplished with FOCAS optical spectroscopy, which can observe both [O_ii] and [O_iii] emission lines simultaneously.

  16. Goldschmidt crater and the Moon's north polar region: Results from the Moon Mineralogy Mapper (M3)

    USGS Publications Warehouse

    Cheek, L.C.; Pieters, C.M.; Boardman, J.W.; Clark, R.N.; Combe, J.-P.; Head, J.W.; Isaacson, P.J.; McCord, T.B.; Moriarty, D.; Nettles, J.W.; Petro, N.E.; Sunshine, J.M.; Taylor, L.A.

    2011-01-01

    Soils within the impact crater Goldschmidt have been identified as spectrally distinct from the local highland material. High spatial and spectral resolution data from the Moon Mineralogy Mapper (M3) on the Chandrayaan-1 orbiter are used to examine the character of Goldschmidt crater in detail. Spectral parameters applied to a north polar mosaic of M3 data are used to discern large-scale compositional trends at the northern high latitudes, and spectra from three widely separated regions are compared to spectra from Goldschmidt. The results highlight the compositional diversity of the lunar nearside, in particular, where feldspathic soils with a low-Ca pyroxene component are pervasive, but exclusively feldspathic regions and small areas of basaltic composition are also observed. Additionally, we find that the relative strengths of the diagnostic OH/H2O absorption feature near 3000 nm are correlated with the mineralogy of the host material. On both global and local scales, the strongest hydrous absorptions occur on the more feldspathic surfaces. Thus, M3 data suggest that while the feldspathic soils within Goldschmidt crater are enhanced in OH/H2O compared to the relatively mafic nearside polar highlands, their hydration signatures are similar to those observed in the feldspathic highlands on the farside.

  17. Towards the use of bioresorbable fibers in time-domain diffuse optics.

    PubMed

    Di Sieno, Laura; Boetti, Nadia G; Dalla Mora, Alberto; Pugliese, Diego; Farina, Andrea; Konugolu Venkata Sekar, Sanathana; Ceci-Ginistrelli, Edoardo; Janner, Davide; Pifferi, Antonio; Milanese, Daniel

    2018-01-01

    In the last years bioresorbable materials are gaining increasing interest for building implantable optical components for medical devices. In this work we show the fabrication of bioresorbable optical fibers designed for diffuse optics applications, featuring large core diameter (up to 200 μm) and numerical aperture (0.17) to maximize the collection efficiency of diffused light. We demonstrate the suitability of bioresorbable fibers for time-domain diffuse optical spectroscopy firstly checking the intrinsic performances of the setup by acquiring the instrument response function. We then validate on phantoms the use of bioresorbable fibers by applying the MEDPHOT protocol to assess the performance of the system in measuring optical properties (namely, absorption and scattering coefficients) of homogeneous media. Further, we show an ex-vivo validation on a chicken breast by measuring the absorption and scattering spectra in the 500-1100 nm range using interstitially inserted bioresorbable fibers. This work represents a step toward a new way to look inside the body using optical fibers that can be implanted in patients. These fibers could be useful either for diagnostic (e. g. for monitoring the evolution after surgical interventions) or treatment (e. g. photodynamic therapy) purposes. Picture: Microscopy image of the 100 μm core bioresorbable fiber. © 2017 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  18. Non-intrusive optical study of gas and its exchange in human maxillary sinuses

    NASA Astrophysics Data System (ADS)

    Persson, L.; Andersson, M.; Svensson, T.; Cassel-Engquist, M.; Svanberg, K.; Svanberg, S.

    2007-07-01

    We demonstrate a novel non-intrusive technique based on tunable diode laser absorption spectroscopy to investigate human maxillary sinuses in vivo. The technique relies on the fact that free gases have much sharper absorption features (typical a few GHz) than the surrounding tissue. Molecular oxygen was detected at 760 nm. Volunteers have been investigated by injecting near-infrared light fibre-optically in contact with the palate inside the mouth. The multiply scattered light was detected externally by a handheld probe on and around the cheek bone. A significant signal difference in oxygen imprint was observed when comparing volunteers with widely different anamnesis regarding maxillary sinus status. Control measurements through the hand and through the cheek below the cheekbone were also performed to investigate any possible oxygen offset in the setup. These provided a consistently non-detectable signal level. The passages between the nasal cavity and the maxillary sinuses were also non-intrusively optically studied, to the best of our knowledge for the first time. These measurements provide information on the channel conductivity which may prove useful in facial sinus diagnostics. The results suggest that a clinical trial together with an ear-nose-throat (ENT) clinic should be carried out to investigate the clinical use of the new technique.

  19. Quantitative reflectance spectroscopy of buddingtonite from the Cuprite mining district, Nevada

    NASA Technical Reports Server (NTRS)

    Felzer, Benjamin; Hauff, Phoebe; Goetz, Alexander F. H.

    1994-01-01

    Buddingtonite, an ammonium-bearing feldspar diagnostic of volcanic-hosted alteration, can be identified and, in some cases, quantitatively measured using short-wave infrared (SWIR) reflectance spectroscopy. In this study over 200 samples from Cuprite, Nevada, were evaluated by X ray diffraction, chemical analysis, scanning electron microscopy, and SWIR reflectance spectroscopy with the objective of developing a quantitative remote-sensing technique for rapid determination of the amount of ammonium or buddingtonite present, and its distribution across the site. Based upon the Hapke theory of radiative transfer from particulate surfaces, spectra from quantitative, physical mixtures were compared with computed mixture spectra. We hypothesized that the concentration of ammonium in each sample is related to the size and shape of the ammonium absorption bands and tested this hypothesis for samples of relatively pure buddingtonite. We found that the band depth of the 2.12-micron NH4 feature is linearly related to the NH4 concentration for the Cuprite buddingtonite, and that the relationship is approximately exponential for a larger range of NH4 concentrations. Associated minerals such as smectite and jarosite suppress the depth of the 2.12-micron NH4 absorption band. Quantitative reflectance spectroscopy is possible when the effects of these associated minerals are also considered.

  20. Computer-aided interpretation approach for optical tomographic images

    NASA Astrophysics Data System (ADS)

    Klose, Christian D.; Klose, Alexander D.; Netz, Uwe J.; Scheel, Alexander K.; Beuthan, Jürgen; Hielscher, Andreas H.

    2010-11-01

    A computer-aided interpretation approach is proposed to detect rheumatic arthritis (RA) in human finger joints using optical tomographic images. The image interpretation method employs a classification algorithm that makes use of a so-called self-organizing mapping scheme to classify fingers as either affected or unaffected by RA. Unlike in previous studies, this allows for combining multiple image features, such as minimum and maximum values of the absorption coefficient for identifying affected and not affected joints. Classification performances obtained by the proposed method were evaluated in terms of sensitivity, specificity, Youden index, and mutual information. Different methods (i.e., clinical diagnostics, ultrasound imaging, magnet resonance imaging, and inspection of optical tomographic images), were used to produce ground truth benchmarks to determine the performance of image interpretations. Using data from 100 finger joints, findings suggest that some parameter combinations lead to higher sensitivities, while others to higher specificities when compared to single parameter classifications employed in previous studies. Maximum performances are reached when combining the minimum/maximum ratio of the absorption coefficient and image variance. In this case, sensitivities and specificities over 0.9 can be achieved. These values are much higher than values obtained when only single parameter classifications were used, where sensitivities and specificities remained well below 0.8.

  1. The Diagnosticity of Color for Emotional Objects

    PubMed Central

    McMenamin, Brenton W.; Radue, Jasmine; Trask, Joanna; Huskamp, Kristin; Kersten, Daniel; Marsolek, Chad J.

    2012-01-01

    Object classification can be facilitated if simple diagnostic features can be used to determine class membership. Previous studies have found that simple shapes may be diagnostic for emotional content and automatically alter the allocation of visual attention. In the present study, we analyzed whether color is diagnostic of emotional content and tested whether emotionally diagnostic hues alter the allocation of visual attention. Reddish-yellow hues are more common in (i.e., diagnostic of) emotional images, particularly images with positive emotional content. An exogenous cueing paradigm was employed to test whether these diagnostic hues orient attention differently from other hues due to the emotional diagnosticity. In two experiments, we found that participants allocated attention differently to diagnostic hues than to non-diagnostic hues, in a pattern indicating a broadening of spatial attention when cued with diagnostic hues. Moreover, the attentional broadening effect was predicted by self-reported measures of affective style, linking the behavioral effect to emotional processes. These results confirm the existence and use of diagnostic features for the rapid detection of emotional content. PMID:24659831

  2. Interaction of doughnut-shaped laser pulses with glasses

    DOE PAGES

    Zhukov, Vladimir P.; Rubenchik, Alexander M.; Fedoruk, Mikhail P.; ...

    2017-01-26

    Non-Gaussian laser beams can open new opportunities for microfabrication, including ultrashort laser direct writing. By using a model based on Maxwell’s equations, we investigate the dynamics of doughnut-shaped laser beams focused inside fused silica glass, in comparison with Gaussian pulses of the same energy. The laser propagation dynamics reveals intriguing features of beam splitting and sudden collapse toward the beam axis, overcoming the intensity clamping effect. The resulting structure of light absorption represents a very hot, hollow nanocylinder, which can lead to an implosion process that brings matter to extreme thermodynamic states. Furthermore, by monitoring the simulations of the lasermore » beam scattering we see a considerable difference in both the blueshift and the angular distribution of scattered light for different laser energies, suggesting that investigations of the spectra of scattered radiation can be used as a diagnostic of laser-produced electron plasmas in transparent materials.« less

  3. A promising diagnostic method: Terahertz pulsed imaging and spectroscopy

    PubMed Central

    Sun, Yiwen; Sy, Ming Yiu; Wang, Yi-Xiang J; Ahuja, Anil T; Zhang, Yuan-Ting; Pickwell-MacPherson, Emma

    2011-01-01

    The terahertz band lies between the microwave and infrared regions of the electromagnetic spectrum. This radiation has very low photon energy and thus it does not pose any ionization hazard for biological tissues. It is strongly attenuated by water and very sensitive to water content. Unique absorption spectra due to intermolecular vibrations in this region have been found in different biological materials. These unique features make terahertz imaging very attractive for medical applications in order to provide complimentary information to existing imaging techniques. There has been an increasing interest in terahertz imaging and spectroscopy of biologically related applications within the last few years and more and more terahertz spectra are being reported. This paper introduces terahertz technology and provides a short review of recent advances in terahertz imaging and spectroscopy techniques, and a number of applications such as molecular spectroscopy, tissue characterization and skin imaging are discussed. PMID:21512652

  4. SpectraPLOT, Visualization Package with a User-Friendly Graphical Interface

    NASA Astrophysics Data System (ADS)

    Sebald, James; Macfarlane, Joseph; Golovkin, Igor

    2017-10-01

    SPECT3D is a collisional-radiative spectral analysis package designed to compute detailed emission, absorption, or x-ray scattering spectra, filtered images, XRD signals, and other synthetic diagnostics. The spectra and images are computed for virtual detectors by post-processing the results of hydrodynamics simulations in 1D, 2D, and 3D geometries. SPECT3D can account for a variety of instrumental response effects so that direct comparisons between simulations and experimental measurements can be made. SpectraPLOT is a user-friendly graphical interface for viewing a wide variety of results from SPECT3D simulations, and applying various instrumental effects to the simulated images and spectra. We will present SpectraPLOT's ability to display a variety of data, including spectra, images, light curves, streaked spectra, space-resolved spectra, and drilldown plasma property plots, for an argon-doped capsule implosion experiment example. Future SpectraPLOT features and enhancements will also be discussed.

  5. Deep-learning derived features for lung nodule classification with limited datasets

    NASA Astrophysics Data System (ADS)

    Thammasorn, P.; Wu, W.; Pierce, L. A.; Pipavath, S. N.; Lampe, P. D.; Houghton, A. M.; Haynor, D. R.; Chaovalitwongse, W. A.; Kinahan, P. E.

    2018-02-01

    Only a few percent of indeterminate nodules found in lung CT images are cancer. However, enabling earlier diagnosis is important to avoid invasive procedures or long-time surveillance to those benign nodules. We are evaluating a classification framework using radiomics features derived with a machine learning approach from a small data set of indeterminate CT lung nodule images. We used a retrospective analysis of 194 cases with pulmonary nodules in the CT images with or without contrast enhancement from lung cancer screening clinics. The nodules were contoured by a radiologist and texture features of the lesion were calculated. In addition, sematic features describing shape were categorized. We also explored a Multiband network, a feature derivation path that uses a modified convolutional neural network (CNN) with a Triplet Network. This was trained to create discriminative feature representations useful for variable-sized nodule classification. The diagnostic accuracy was evaluated for multiple machine learning algorithms using texture, shape, and CNN features. In the CT contrast-enhanced group, the texture or semantic shape features yielded an overall diagnostic accuracy of 80%. Use of a standard deep learning network in the framework for feature derivation yielded features that substantially underperformed compared to texture and/or semantic features. However, the proposed Multiband approach of feature derivation produced results similar in diagnostic accuracy to the texture and semantic features. While the Multiband feature derivation approach did not outperform the texture and/or semantic features, its equivalent performance indicates promise for future improvements to increase diagnostic accuracy. Importantly, the Multiband approach adapts readily to different size lesions without interpolation, and performed well with relatively small amount of training data.

  6. Multiepoch Spectropolarimetry of SN 2011fe

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Milne, Peter A.; Williams, G. Grant; Smith, Paul S.

    2017-01-20

    We present multiple spectropolarimetric observations of the nearby Type Ia supernova (SN) 2011fe in M101, obtained before, during, and after the time of maximum apparent visual brightness. The excellent time coverage of our spectropolarimetry has allowed better monitoring of the evolution of polarization features than is typical, which has allowed us new insight into the nature of normal SNe Ia. SN 2011fe exhibits time-dependent polarization in both the continuum and strong absorption lines. At early epochs, red wavelengths exhibit a degree of continuum polarization of up to 0.4%, likely indicative of a mild asymmetry in the electron-scattering photosphere. This behaviormore » is more common in subluminous SNe Ia than in normal events, such as SN 2011fe. The degree of polarization across a collection of absorption lines varies dramatically from epoch to epoch. During the earliest epoch, a λ 4600–5000 Å complex of absorption lines shows enhanced polarization at a different position angle than the continuum. We explore the origin of these features, presenting a few possible interpretations, without arriving at a single favored ion. During two epochs near maximum, the dominant polarization feature is associated with the Si ii λ 6355 Å absorption line. This is common for SNe Ia, but for SN 2011fe the polarization of this feature increases after maximum light, whereas for other SNe Ia, that polarization feature was strongest before maximum light.« less

  7. Ferric iron in primitive asteroids - A 0.43-micron absorption feature

    NASA Technical Reports Server (NTRS)

    Vilas, Faith; Hatch, Erin C.; Larson, Stephen M.; Sawyer, Scott R.; Gaffey, Michael J.

    1993-01-01

    A search of reflectance spectra of C- P-, D- and S-class asteroids to hunt for the Soret band near 0.4 micron that is indicative of porphyrins yielded an identification of an 0.43 micron absorption feature in 11 primitive asteroids of the C, P, and G classes and in one S-class asteroid. It is proposed that the feature is an Fe(3+) spin-forbidden transition in aqueously altered material, possibly located near 0.43 micron due to an enhancement effect similar to the mechanism operating in jarosite. The significance of the feature for the aqueous alteration history of these asteroids is addressed.

  8. Preliminary results from an investigation of AIS-1 data over an area of epithermal alteration: Plateau, Northern Queensland, Australia

    NASA Technical Reports Server (NTRS)

    Mackin, Steve; Munday, Tim; Hook, Simon

    1987-01-01

    Airborne Imaging Spectrometer-1 (AIS-1) data were flown over undifferentiated sequences of acid to intermediate volcanics and intrusives; meta-sediments; and a series of partially lateritized sedimentary rocks. The area exhibits a considerable spectral variability, after the suppression of striping effects. Log residual, and Internal Average Relative Reflectance (IARR) analytical techniques were used to enhance mineralogically related spectral features. Both methods produce similar results, but did not visually highlight mineral absorption features due to processing artifacts in areas of significant vegetation cover. The enhancement of mineral related absorption features was achieved using a hybrid processing approach based on the relative reflectance differences between vegetated and non-vegetated surfaces at 1.2 and 2.1 micron. The result is an image with little overall contrast, but which enhances the more subtle spectral features believed to be associated with clays and epidote. The AIS data was subject to interactive analysis using SPAM. Clear separation of clay and epidote related absorption features was apparent, and the identification of kaolinite was possible despite detrimental spectral effects.

  9. Line Identifications in the Far Ultraviolet Spectrum of the Eclipsing Binary System 31 Cygni

    NASA Astrophysics Data System (ADS)

    Hagen Bauer, Wendy; Bennett, P. D.

    2011-05-01

    The eclipsing binary system 31 Cygni (K4 Ib + B3 V) was observed at several phases with the Far Ultraviolet Spectrosocopic Explorer (FUSE) satellite. During total eclipse, a rich emission spectrum was observed, produced by scattering of hot star photons in the extended wind of the K supergiant. The system was observed during deep chromospheric eclipse, and 2.5 months after total eclipse ended. We present an atlas of line identifications in these spectra. During total eclipse, emission features from C II , C III, N I, N II, N III, O I, Si II, P II, P III, S II, S III, Ar I, Cr III, Fe II, Fe III, and Ni II were detected. The strongest emission features arise from N II. These lines appear strongly in absorption during chromospheric eclipse, and even 2.5 months after total eclipse, the absorption bottoms out on the underlying emission seen during total eclipse. The second strongest features in the emission spectrum arise from Fe III. Any chromospheric Fe III absorption is buried within strong chromospheric absorption from other species, mainly Fe II. The emission profiles of most of the doubly-ionized species are red-shifted relative to the systemic velocity, with asymmetric profiles with a steeper long-wavelength edge. Emission profiles from singly-ionized species tend to be more symmetric and centered near the systemic velocity. In deep chromospheric eclipse, absorption features are seen from neutral and singly-ionized species, arising from lower levels up to 3 eV. Many strong chromospheric features are doubled in the observation obtained during egress from eclipse. The 31 Cygni spectrum taken 2.5 months after total eclipse ended ws compared to single-star B spectra from the FUSE archives. There was still some additional chromospheric absorption from strong low-excitation Fe II, O I and Ar I.

  10. Dental and dental hygiene students' diagnostic accuracy in oral radiology: effect of diagnostic strategy and instructional method.

    PubMed

    Baghdady, Mariam T; Carnahan, Heather; Lam, Ernest W N; Woods, Nicole N

    2014-09-01

    There has been much debate surrounding diagnostic strategies and the most appropriate training models for novices in oral radiology. It has been argued that an analytic approach, using a step-by-step analysis of the radiographic features of an abnormality, is ideal. Alternative research suggests that novices can successfully employ non-analytic reasoning. Many of these studies do not take instructional methodology into account. This study evaluated the effectiveness of non-analytic and analytic strategies in radiographic interpretation and explored the relationship between instructional methodology and diagnostic strategy. Second-year dental and dental hygiene students were taught four radiographic abnormalities using basic science instructions or a step-by-step algorithm. The students were tested on diagnostic accuracy and memory immediately after learning and one week later. A total of seventy-three students completed both immediate and delayed sessions and were included in the analysis. Students were randomly divided into two instructional conditions: one group provided a diagnostic hypothesis for the image and then identified specific features to support it, while the other group first identified features and then provided a diagnosis. Participants in the diagnosis-first condition (non-analytic reasoning) had higher diagnostic accuracy then those in the features-first condition (analytic reasoning), regardless of their learning condition. No main effect of learning condition or interaction with diagnostic strategy was observed. Educators should be mindful of the potential influence of analytic and non-analytic approaches on the effectiveness of the instructional method.

  11. Aliphatic Hydrocarbon Content of Interstellar Dust

    NASA Astrophysics Data System (ADS)

    Günay, B.; Schmidt, T. W.; Burton, M. G.; Afşar, M.; Krechkivska, O.; Nauta, K.; Kable, S. H.; Rawal, A.

    2018-06-01

    There is considerable uncertainty as to the amount of carbon incorporated in interstellar dust. The aliphatic component of the carbonaceous dust is of particular interest because it produces a significant 3.4 μm absorption feature when viewed against a background radiation source. The optical depth of the 3.4 μm absorption feature is related to the number of aliphatic carbon C-H bonds along the line of sight. It is possible to estimate the column density of carbon locked up in the aliphatic hydrocarbon component of interstellar dust from quantitative analysis of the 3.4 μm interstellar absorption feature providing that the absorption coefficient of aliphatic hydrocarbons incorporated in the interstellar dust is known. We report laboratory analogues of interstellar dust by experimentally mimicking interstellar/circumstellar conditions. The resultant spectra of these dust analogues closely match those from astronomical observations. Measurements of the absorption coefficient of aliphatic hydrocarbons incorporated in the analogues were carried out by a procedure combining FTIR and 13C NMR spectroscopies. The absorption coefficients obtained for both interstellar analogues were found to be in close agreement (4.76(8) × 10-18 cm group-1 and 4.69(14) × 10-18 cm group-1), less than half those obtained in studies using small aliphatic molecules. The results thus obtained permit direct calibration of the astronomical observations, providing rigorous estimates of the amount of aliphatic carbon in the interstellar medium.

  12. "CHON" particles: The interstellar component of cometary dust

    NASA Technical Reports Server (NTRS)

    Lien, David J.

    1998-01-01

    Interstellar dust is characterized by strong absorption in the ultraviolet and the mid-IR. Current models of interstellar dust are based on three chemically distinct components: a form of carbon (usually graphite), a silicate, and a blend of polycyclic aromatic hydrocarbons or other carbonaceous material. Previous work using effective medium theories to understand the optical properties of cometary dust suggested that an amalgam of materials could reproduce the observed interstellar and cometary dust features. Recently, Lawler and Brownlee (1992) re-analyzed the PIA and PUMA-1 data sets from the Giotto flyby of P/Halley and discovered that the so-called "CHON" particles were actually composed of a blend of carbon-bearing and silicon-bearing materials. Based on effective medium theories, the absorption spectrum of such a material would display the spectral features of each of the components - strong UV absorption from the carbonaceous component and strong absorption in the IR from the silicate component. To test this idea, vapor-deposited samples were created using two different deposition techniques: sputtering with an argon RF magnetron and deposition from an argon plasma torch. Two different compositions were tested: a blend of graphite and silica in a 7:1 ratio and an amalgam of materials whose approximate composition matches the "CHON"-silicate abundances for the uncompressed PIA data set of Lawler and Brownlee: graphite, iron oxide, magnesium oxide, ammonium sulfate, calcium carbonate, and silica in mass ratios of 6:4.3:4:2.2:1:9. The samples were finely ground and pressed into 2" diameter disks using a 40 ton press. In all, four different experiments were performed: one with each of the compositions (C:SiO and "CHON") in both the RF magnetron and the plasma torch chambers. The RF magnetron created a uniform dark thin film on the substrate surface, and the plasma torch created a coating of small (<100 micron) diameter grey particles. The spectra of all four samples show a strong, broad absorption feature at around 220 nm as well as a strong but narrower absorption peak near 10 microns. The RF magnetron sputtered samples showed some sub-structure in the UV, and the peak of the absorption was shifted toward longer wavelengths. The UV absorption in the plasma torch deposited samples have no sub-structure, and the peak absorption is very near 220 nm. Strong absorption near 9 microns is seen in the spectra from both sample preparation techniques, and is consistent with the IR spectra of some terrestrial silicates. Other features, particularly at 6.2 and 8.6 microns, are seen in the interstellar medium. A strong feature near 2 microns is due to absorbed water in the sample. Based on the results of these experiments, there is evidence that a material with a composition similar to that detected in "CHON" particles in the coma of P/Halley have a spectral signature which reproduces the main absorption features of interstellar dust. This suggests that the "CHON" particles could be the interstellar component of cometary dust.

  13. Real Time Diagnostics of Jet Engine Exhaust Plumes Using a Chirped QC Laser Spectrometer

    NASA Astrophysics Data System (ADS)

    Hay, K. G.; Duxbury, G.; Langford, N.

    2010-06-01

    Quantitative measurements of real-time variations of the chemical composition of a jet engine exhaust plume is demonstrated using a 4.86 μmn intra-pulse quantum cascade laser spectrometer. The measurements of the gas turbine exhaust were carried out in collaboration with John Black and Mark Johnson at Rolls Royce. The recording of five sets of averaged spectra a second has allowed us to follow the build up of the combustion products within the exhaust, and to demonstrate the large variation of the integrated absorption of these absorption lines with temperature. The absorption cross sections of the lines of both carbon monoxide and water increase with temperature, whereas those of the three main absorption lines of carbon dioxide decrease. At the steady state limit the absorption lines of carbon dioxide are barely visible, and the spectrum is dominated by absorption lines of carbon monoxide and water.

  14. In Vivo Evaluation and Proof of Radiofrequency Safety of a Novel Diagnostic MR-Electrophysiology Catheter

    PubMed Central

    Weiss, Steffen; Wirtz, Daniel; David, Bernd; Krueger, Sascha; Lips, Oliver; Caulfield, Dennis; Pedersen, Steen Fjord; Bostock, Julian; Razavi, Reza; Schaeffter, Tobias

    2013-01-01

    An MR-electrophysiology (EP) catheter is presented that provides full diagnostic EP functionality and a high level of radiofrequency safety achieved by custom-designed transmission lines. Highly resistive wires transmit intracardiac electrograms and currents for intracardiac pacing. A transformer cable transmits the localization signal of a tip coil. Specific absorption rate simulations and temperature measurements at 1.5 T demonstrate that a wire resistance > 3 kΩ/m limits dielectric heating to a physiologically irrelevant level. Additional wires do not increase tip specific absorption rate significantly, which is important because some clinical catheters require up to 20 electrodes. It is further demonstrated that radiofrequency-induced and pacing-induced resistive heating of the wires is negligible under clinical conditions. The MR-EP catheters provided uncompromised recording of electrograms and cardiac pacing in combination with a standard EP recorder in MR-guided in vivo EP studies, and the tip coil enabled fast and robust catheter localization. In vivo temperature measurements during such a study did not detect any device-related heating, which confirms the high level of safety of the catheter, whereas unacceptable heating was found with a standard EP catheter. The presented concept for the first time enables catheters with full diagnostic EP functionality and active tracking and at the same time a sufficient level of radiofrequency safety for MRI without specific absorption rate-related limitations. PMID:21337409

  15. In vivo evaluation and proof of radiofrequency safety of a novel diagnostic MR-electrophysiology catheter.

    PubMed

    Weiss, Steffen; Wirtz, Daniel; David, Bernd; Krueger, Sascha; Lips, Oliver; Caulfield, Dennis; Pedersen, Steen Fjord; Bostock, Julian; Razavi, Reza; Schaeffter, Tobias

    2011-03-01

    An MR-electrophysiology (EP) catheter is presented that provides full diagnostic EP functionality and a high level of radiofrequency safety achieved by custom-designed transmission lines. Highly resistive wires transmit intracardiac electrograms and currents for intracardiac pacing. A transformer cable transmits the localization signal of a tip coil. Specific absorption rate simulations and temperature measurements at 1.5 T demonstrate that a wire resistance > 3 kΩ/m limits dielectric heating to a physiologically irrelevant level. Additional wires do not increase tip specific absorption rate significantly, which is important because some clinical catheters require up to 20 electrodes. It is further demonstrated that radiofrequency-induced and pacing-induced resistive heating of the wires is negligible under clinical conditions. The MR-EP catheters provided uncompromised recording of electrograms and cardiac pacing in combination with a standard EP recorder in MR-guided in vivo EP studies, and the tip coil enabled fast and robust catheter localization. In vivo temperature measurements during such a study did not detect any device-related heating, which confirms the high level of safety of the catheter, whereas unacceptable heating was found with a standard EP catheter. The presented concept for the first time enables catheters with full diagnostic EP functionality and active tracking and at the same time a sufficient level of radiofrequency safety for MRI without specific absorption rate-related limitations. Copyright © 2010 Wiley-Liss, Inc.

  16. Predictive capabilities of statistical learning methods for lung nodule malignancy classification using diagnostic image features: an investigation using the Lung Image Database Consortium dataset

    NASA Astrophysics Data System (ADS)

    Hancock, Matthew C.; Magnan, Jerry F.

    2017-03-01

    To determine the potential usefulness of quantified diagnostic image features as inputs to a CAD system, we investigate the predictive capabilities of statistical learning methods for classifying nodule malignancy, utilizing the Lung Image Database Consortium (LIDC) dataset, and only employ the radiologist-assigned diagnostic feature values for the lung nodules therein, as well as our derived estimates of the diameter and volume of the nodules from the radiologists' annotations. We calculate theoretical upper bounds on the classification accuracy that is achievable by an ideal classifier that only uses the radiologist-assigned feature values, and we obtain an accuracy of 85.74 (+/-1.14)% which is, on average, 4.43% below the theoretical maximum of 90.17%. The corresponding area-under-the-curve (AUC) score is 0.932 (+/-0.012), which increases to 0.949 (+/-0.007) when diameter and volume features are included, along with the accuracy to 88.08 (+/-1.11)%. Our results are comparable to those in the literature that use algorithmically-derived image-based features, which supports our hypothesis that lung nodules can be classified as malignant or benign using only quantified, diagnostic image features, and indicates the competitiveness of this approach. We also analyze how the classification accuracy depends on specific features, and feature subsets, and we rank the features according to their predictive power, statistically demonstrating the top four to be spiculation, lobulation, subtlety, and calcification.

  17. Breath Analysis Using Laser Spectroscopic Techniques: Breath Biomarkers, Spectral Fingerprints, and Detection Limits

    PubMed Central

    Wang, Chuji; Sahay, Peeyush

    2009-01-01

    Breath analysis, a promising new field of medicine and medical instrumentation, potentially offers noninvasive, real-time, and point-of-care (POC) disease diagnostics and metabolic status monitoring. Numerous breath biomarkers have been detected and quantified so far by using the GC-MS technique. Recent advances in laser spectroscopic techniques and laser sources have driven breath analysis to new heights, moving from laboratory research to commercial reality. Laser spectroscopic detection techniques not only have high-sensitivity and high-selectivity, as equivalently offered by the MS-based techniques, but also have the advantageous features of near real-time response, low instrument costs, and POC function. Of the approximately 35 established breath biomarkers, such as acetone, ammonia, carbon dioxide, ethane, methane, and nitric oxide, 14 species in exhaled human breath have been analyzed by high-sensitivity laser spectroscopic techniques, namely, tunable diode laser absorption spectroscopy (TDLAS), cavity ringdown spectroscopy (CRDS), integrated cavity output spectroscopy (ICOS), cavity enhanced absorption spectroscopy (CEAS), cavity leak-out spectroscopy (CALOS), photoacoustic spectroscopy (PAS), quartz-enhanced photoacoustic spectroscopy (QEPAS), and optical frequency comb cavity-enhanced absorption spectroscopy (OFC-CEAS). Spectral fingerprints of the measured biomarkers span from the UV to the mid-IR spectral regions and the detection limits achieved by the laser techniques range from parts per million to parts per billion levels. Sensors using the laser spectroscopic techniques for a few breath biomarkers, e.g., carbon dioxide, nitric oxide, etc. are commercially available. This review presents an update on the latest developments in laser-based breath analysis. PMID:22408503

  18. The luminous, massive and solar metallicity galaxy hosting the Swift γ-ray burst GRB 160804A at z = 0.737

    NASA Astrophysics Data System (ADS)

    Heintz, K. E.; Malesani, D.; Wiersema, K.; Jakobsson, P.; Fynbo, J. P. U.; Savaglio, S.; Cano, Z.; Covino, S.; D'Elia, V.; Gomboc, A.; Hammer, F.; Kaper, L.; Milvang-Jensen, B.; Møller, P.; Piranomonte, S.; Selsing, J.; Rhodin, N. H. P.; Tanvir, N. R.; Thöne, C. C.; de Ugarte Postigo, A.; Vergani, S. D.; Watson, D.

    2018-02-01

    We here present the spectroscopic follow-up observations with VLT/X-shooter of the Swift long-duration gamma-ray burst GRB 160804A at z = 0.737. Typically, GRBs are found in low-mass, metal-poor galaxies that constitute the sub-luminous population of star-forming galaxies. For the host galaxy of the GRB presented here, we derive a stellar mass of log (M*/ M⊙) = 9.80 ± 0.07, a roughly solar metallicity (12 + log (O/H) = 8.74 ± 0.12) based on emission line diagnostics, and an infrared luminosity of M3.6/(1 + z) = -21.94 mag, but find it to be dust-poor (E(B - V) < 0.05 mag). This establishes the galaxy hosting GRB 160804A as one of the most luminous, massive and metal-rich GRB hosts at z < 1.5. Furthermore, the gas-phase metallicity is found to be representative of the physical conditions of the gas close to the explosion site of the burst. The high metallicity of the host galaxy is also observed in absorption, where we detect several strong Fe II transitions as well as Mg II and Mg I. Although host galaxy absorption features are common in GRB afterglow spectra, we detect absorption from strong metal lines directly in the host continuum (at a time when the afterglow was contributing to < 15 per cent). Finally, we discuss the possibility that the geometry and state of the absorbing and emitting gas are indicative of a galactic scale outflow expelled at the final stage of two merging galaxies.

  19. Initial Lithologic Mapping Results Using Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) Data

    NASA Astrophysics Data System (ADS)

    Rowan, L. C.; Mars, J. C.

    2001-05-01

    Initial analysis of ASTER data of selected areas in the Western United States shows that many important lithologic units can be mapped on the basis of spectral reflectance and spectral emittance. ASTER's most important attributes are 9 bands which record reflected-solar energy with 15 meter- and 30 meter-resolution; 5 bands of emitted energy at 90 meter- resolution; 15 meter-resolution stereoscopic images; and repetitive coverage. Particularly useful 'on-demand' ASTER data products include surface reflectance and surface emissivity images, and digital elevation models (DEM). In the solar-reflected wavelength region (0.4 to 2.5 micrometers), clays, carbonates, hydrous sulphate, and iron-oxide minerals exhibit diagnostic absorption features, whereas the emitted wavelength region (8 to 14 micrometers) provides critical information about anhydrous rock-forming minerals, such as quartz and feldspars, which lack diagnostic absorption features in the solar-reflected region. The Mountain Pass, Calf., Goldfield, Nev., and Virginia Range, Nev. study areas comprise a wide range of lithologic types for evaluating ASTER data. Calibration of the 3 bands recorded in the 0.52 to 0.86 micrometer wavelength region and the 6 bands in the 1.60 to 2.43 micrometer region was improved beyond the 'on-demand' surface reflectance standard product by using in situ spectral reflectance measurements of homogeneous field sites. Validation of this calibration was based on comparisons with spectra from calibrated AVIRIS data, and with additional field measurements. Lithologic mapping based on ASTER bands 1-9 was conducted by using endmember spectra from the image as reference spectra in matched-filter processing. The results were thresholded to display the pixels with the best match for each endmember. The results in these study areas show that Muscovite Group minerals (muscovite, illite, kaolinite) can be mapped over broad reasonably well exposed areas, and that the most intense absorption features occur in hydrothermally altered rocks. In the Mountain Pass area a few exposures containing Fe-muscovite were distinguished from the more extensive Al-mucovite-bearing rocks and soils. Advanced-argillic alteration minerals (alunite, dickite) were detected in the Goldfield mining district and in the Virginia Range. Carbonate Group minerals (calcite, dolomite) were mapped in extensive exposures in the thrust belt of the Mountain Pass area, and well exposed dolomite was distinguished from limestone in several areas. Although skarn deposits consist mainly of calcite and dolomite, their spectral shape in ASTER bands 1-9 is significantly different than typical limestone and dolomite spectra because of the presence of epidote, garnet and chrysotile in the skarn deposits. Mg-OH-bearing minerals (chlorite, biotite, hornblende) proved to be more difficult to map, although generally they were not confused with minerals of the Carbonate Group. Ferric-iron Group minerals were mapped by using a band2/band1 ratio image. Analysis of the surface emissivity standard image products relied on identification of endmember-image spectra by using the pixel-purity index procedure in the ENVI software package, and matched-filter processing. Silica-rich rocks and silica-poor rocks were recognized readily in decorrelation-stretch images, as well as matched-filter endmember images, and 2 intermediate categories were distinguished in most areas.

  20. Sensor for Monitoring Nanodevice-Fabrication Plasmas

    NASA Technical Reports Server (NTRS)

    Bolshakov, Alexander

    2004-01-01

    The term plasma process diagnostics (PPD) refers to a spectroscopic technique and sensing hardware that have been proposed for monitoring plasma processes used to fabricate electronic devices that feature sizes as small as several nanometers. Nanometer dimensions are characteristic of the quantum level of miniaturization, where single impurity atoms or molecules can drastically change the local properties of the nanostructures. Such changes may be purposely used in nanoscale design but may also be extremely damaging or cause improper operation of the fabricated devices. Determination of temperature and densities of reactants near the developing features is important, since the structural synthesis is affected by characteristics of the local microenvironment. Consequently, sensors capable of nonintrusive monitoring with high sensitivity and high resolution are essential for real-time atomistic control of reaction kinetics and minimizing trace contamination in plasma processes used to fabricate electronic nanodevices. Such process-monitoring sensors are required to be compact, multiparametric, and immune to the harsh environments of processing plasmas. PPD is intended to satisfy these requirements. The specific technique used to implement plasma diagnostics with a PPD sensor would be an advanced version of continuous-wave cavity-ringdown spectroscopy (CW-CRDS) capable of profiling spectral line broadenings in order to derive both Doppler and Stark components. CRDS is based on measurements of the rate of absorption of laser light in an optical resonator. The ultimate sensitivity results from a very long absorption path length within the cavity and immunity to variations in incident laser intensity. The proposed version of this technique would involve the use of multiplexing tunable laser diodes and an actively modulated high-reflectivity optical resonator, thus offering a synergistic combination of simplicity, compactness, high sensitivity, and high resolution. The multiplexing capabilities of diode lasers could be utilized to make the PPD sensor a single, simple, compact, and inexpensive tool for the acquisition of multiparametric data. A PPD sensor would be capable of continuous measurement of such physical parameters as gas temperature, gas velocity, electron number density, and absolute densities of reacting chemical species. A laser beam can be easily adjusted to analyze the immediate vicinity of the growing nanostructures (or features etched down) in real time. The absorption enhancement in an optical cavity would afford the sensitivity needed for measurement of the temperature and densities of species at concentrations significantly lower than measurable by other nonintrusive techniques. It is anticipated that fully developed PPD sensors would enable simultaneous measurement of local temperature and determination of plasma species responsible for the synthesis and functionalization of nanodevices. These sensors would also enable tracking the pathways and origins of damaging contaminants, thereby providing feedback for adjustment of processes to optimize them and reduce contamination. The PPD sensors should also be useful for optimization of conventional microelectronics manufacturing plasma processes. Going beyond plasma processes for fabrication of electronic devices, PPD sensors could be used for monitoring of atoms, molecules, ions, radicals, clusters, and particles in a variety of other settings, including outer space. Because of their high sensitivity, such sensors could also prove useful for detecting traces of illegal drugs and explosives.

  1. Exocomet Orbit Fitting: Accelerating Coma Absorption During Transits of β Pictoris

    NASA Astrophysics Data System (ADS)

    Kennedy, Grant M.

    2018-06-01

    Comets are a remarkable feature in our night sky, visible on their passage through the inner Solar system as the Sun's energy sublimates ices and liberates surface material, generating beautiful comae, dust, and ion tails. Comets are also thought to orbit other stars, and are the most promising interpretation of sporadic absorption features (i.e. transits) seen in spectra of stars such as β Pictoris and 49 Ceti. These "exocomets" are thought to form and evolve in the same way as in the Solar system, and as in the Solar system we may gain insight into their origins by deriving their orbits. In the case of β Pictoris, orbits have been estimated indirectly, using the radial velocity of the absorption features coupled with a physical evaporation model to estimate the stellocentric distance at transit dtr. Here, we note that the inferred dtr imply that some absorption signatures should accelerate over several hours, and show that this acceleration is indeed seen in HARPS spectra. This new constraint means that orbital characteristics can be obtained directly, and the pericentre distance and longitude constrained when parabolic orbits are assumed. The results from fitting orbits to 12 accelerating features, and a handful of non-accelerating ones, are in broad agreement with previous estimates based on an evaporation model, thereby providing some validation of the exocomet hypothesis. A prediction of the evaporation model, that coma absorption is deeper for more distant transits, is also seen here.

  2. Mars analog minerals' spectral reflectance characteristics under Martian surface conditions

    NASA Astrophysics Data System (ADS)

    Poitras, J. T.; Cloutis, E. A.; Salvatore, M. R.; Mertzman, S. A.; Applin, D. M.; Mann, P.

    2018-05-01

    We investigated the spectral reflectance properties of minerals under a simulated Martian environment. Twenty-eight different hydrated or hydroxylated phases of carbonates, sulfates, and silica minerals were selected based on past detection on Mars through spectral remote sensing data. Samples were ground and dry sieved to <45 μm grain size and characterized by XRD before and after 133 days inside a simulated Martian surface environment (pressure 5 Torr and CO2 fed). Reflectance spectra from 0.35 to 4 μm were taken periodically through a sapphire (0.35-2.5 μm) and zinc selenide (2.5-4 μm) window over a 133-day period. Mineral stability on the Martian surface was assessed through changes in spectral characteristics. Results indicate that the hydrated carbonates studied would be stable on the surface of Mars, only losing adsorbed H2O while maintaining their diagnostic spectral features. Sulfates were less stable, often with shifts in the band position of the SO, Fe, and OH absorption features. Silicas displayed spectral shifts related to SiOH and hydration state of the mineral surface, while diagnostic bands for quartz were stable. Previous detection of carbonate minerals based on 2.3-2.5 μm and 3.4-3.9 μm features appears to be consistent with our results. Sulfate mineral detection is more questionable since there can be shifts in band position related to SO4. The loss of the 0.43 μm Fe3+ band in many of the sulfates indicate that there are fewer potential candidates for Fe3+ sulfates to permanently exist on the Martian surface based on this band. The gypsum sample changed phase to basanite during desiccation as demonstrated by both reflectance and XRD. Silica on Mars has been detected using band depth ratio at 1.91 and 1.96 μm and band minimum position of the 1.4 μm feature, and the properties are also used to determine their age. This technique continues to be useful for positive silica identifications, however, silica age appears to be less consistent with our laboratory data. These results will be useful in spectral libraries for characterizing Martian remote sensed data.

  3. Mid-Infrared Laser Absorption Diagnostics for Combustion and Propulsion Applications

    DTIC Science & Technology

    2010-12-01

    Combustion and Propulsion Applications 5a. CONTRACT NUMBER 5b. GRANT NUMBER N00014-07-1-0844 5c. PROGRAM ELEMENT NUMBER 6. AUTHOR(S) Matthew A...Institute Mechancial, Aerospace, and Nuclear Engineering Dept Troy NY 12180-3590 8. PERFORMING ORGANIZATION REPORT NUMBER 9. SPONSORING / MONITORING...absorption sensors based on quantum cascade laser (QCL) technology for combustion and propulsion applications. To demonstrate the potential of mid-IR QCL

  4. Feature-based and statistical methods for analyzing the Deepwater Horizon oil spill with AVIRIS imagery

    USGS Publications Warehouse

    Rand, R.S.; Clark, R.N.; Livo, K.E.

    2011-01-01

    The Deepwater Horizon oil spill covered a very large geographical area in the Gulf of Mexico creating potentially serious environmental impacts on both marine life and the coastal shorelines. Knowing the oil's areal extent and thickness as well as denoting different categories of the oil's physical state is important for assessing these impacts. High spectral resolution data in hyperspectral imagery (HSI) sensors such as Airborne Visible and Infrared Imaging Spectrometer (AVIRIS) provide a valuable source of information that can be used for analysis by semi-automatic methods for tracking an oil spill's areal extent, oil thickness, and oil categories. However, the spectral behavior of oil in water is inherently a highly non-linear and variable phenomenon that changes depending on oil thickness and oil/water ratios. For certain oil thicknesses there are well-defined absorption features, whereas for very thin films sometimes there are almost no observable features. Feature-based imaging spectroscopy methods are particularly effective at classifying materials that exhibit specific well-defined spectral absorption features. Statistical methods are effective at classifying materials with spectra that exhibit a considerable amount of variability and that do not necessarily exhibit well-defined spectral absorption features. This study investigates feature-based and statistical methods for analyzing oil spills using hyperspectral imagery. The appropriate use of each approach is investigated and a combined feature-based and statistical method is proposed.

  5. The low-iron, reduced surface of Mercury as seen in spectral reflectance by MESSENGER

    NASA Astrophysics Data System (ADS)

    Izenberg, Noam R.; Klima, Rachel L.; Murchie, Scott L.; Blewett, David T.; Holsclaw, Gregory M.; McClintock, William E.; Malaret, Erick; Mauceri, Calogero; Vilas, Faith; Sprague, Ann L.; Helbert, Jörn; Domingue, Deborah L.; Head, James W.; Goudge, Timothy A.; Solomon, Sean C.; Hibbitts, Charles A.; Dyar, M. Darby

    2014-01-01

    The MESSENGER spacecraft's Mercury Atmospheric and Surface Composition Spectrometer (MASCS) obtained more than 1.6 million reflectance spectra of Mercury's surface from near-ultraviolet to near-infrared wavelengths during the first year of orbital operations. A global analysis of spectra in the wavelength range 300-1450 nm shows little regional variation in absolute reflectance or spectral slopes and a lack of mineralogically diagnostic absorptions. In particular, reflectance spectra show no clear evidence for an absorption band centered near 1 μm that would be associated with the presence of ferrous iron in silicates. There is, however, evidence for an ultraviolet absorption possibly consistent with a very low iron content (2-3 wt% FeO or less) in surface silicates and for the presence of small amounts of metallic iron or other opaque minerals in the form of nano- or micrometer-sized particles. These findings are consistent with MESSENGER X-ray and gamma-ray measurements of Mercury's surface iron abundance. Although X-ray and gamma-ray observations indicate higher than expected quantities of sulfur on the surface, reflectance spectra show no absorption bands diagnostic of sulfide minerals. Whereas there is strong evidence of water ice in permanently shadowed craters near Mercury's poles, MASCS spectra provide no evidence for hydroxylated materials near permanently shadowed craters.

  6. Interplay of Collective Excitations in Quantum Well Intersubband Resonances

    NASA Technical Reports Server (NTRS)

    Li, Jian-Zhong; Ning, C. Z.

    2003-01-01

    Intersubband resonances in a semiconductor quantum well (QW) display some of the most fascinating features involving various collective excitations such as Fermi-edge singularity (FES) and intersubband plasmon (ISP). Using a density matrix approach, we treated many-body effects such as depolarization, vertex correction, and self-energy consistently for a two-subband system. We found a systematic change in resonance spectra from FES-dominated to ISP-dominated features, as QW- width or electron density is varied. Such an interplay between FES and ISP significantly changes both line shape and peak position of the absorption spectrum. In particular, we found that a cancellation of FES and ISP undresses the resonant responses and recovers the single-particle features of absorption for semiconductors with a strong nonparabolicity such as InAs, leading to a dramatic broadening of the absorption spectrum.

  7. Atomic Resonance Radiation Energetics Investigation as a Diagnostic Method for Non-Equilibrium Hypervelocity Flows

    NASA Technical Reports Server (NTRS)

    Meyer, Scott A.; Bershader, Daniel; Sharma, Surendra P.; Deiwert, George S.

    1996-01-01

    Absorption measurements with a tunable vacuum ultraviolet light source have been proposed as a concentration diagnostic for atomic oxygen, and the viability of this technique is assessed in light of recent measurements. The instrumentation, as well as initial calibration measurements, have been reported previously. We report here additional calibration measurements performed to study the resonance broadening line shape for atomic oxygen. The application of this diagnostic is evaluated by considering the range of suitable test conditions and requirements, and by identifying issues that remain to be addressed.

  8. Archaeological Salvage Excavations at the L.A. Strickland I Site (22Ts765), Tishomingo County, Mississippi.

    DTIC Science & Technology

    1978-12-01

    were identified to genus and when possible to species. These samples give an indication of the wood types present and their proportionate representation...in the features. Nutshells were sorted by genus and weighed. Seeds which retained their diagnostic characteristics were identified and counted. The...Vitis sp.), l persimmon ( Diospyros viiniana) and 1 round seed misiffng all diagnostic features. Feature 2. The sample from Feature 2 contained 55 grams

  9. Systematic Review and Meta-Analysis of CT Features for Differentiating Complicated and Uncomplicated Appendicitis.

    PubMed

    Kim, Hae Young; Park, Ji Hoon; Lee, Yoon Jin; Lee, Sung Soo; Jeon, Jong-June; Lee, Kyoung Ho

    2018-04-01

    Purpose To perform a systematic review and meta-analysis to identify computed tomographic (CT) features for differentiating complicated appendicitis in patients suspected of having appendicitis and to summarize their diagnostic accuracy. Materials and Methods Studies on diagnostic accuracy of CT features for differentiating complicated appendicitis (perforated or gangrenous appendicitis) in patients suspected of having appendicitis were searched in Ovid-MEDLINE, EMBASE, and the Cochrane Library. Overlapping descriptors used in different studies to denote the same image finding were subsumed under a single CT feature. Pooled diagnostic accuracy of the CT features was calculated by using a bivariate random effects model. CT features with pooled diagnostic odds ratios with 95% confidence intervals not including 1 were considered as informative. Results Twenty-three studies were included, and 184 overlapping descriptors for various CT findings were subsumed under 14 features. Of these, 10 features were informative for complicated appendicitis. There was a general tendency for these features to show relatively high specificity but low sensitivity. Extraluminal appendicolith, abscess, appendiceal wall enhancement defect, extraluminal air, ileus, periappendiceal fluid collection, ascites, intraluminal air, and intraluminal appendicolith showed pooled specificity greater than 70% (range, 74%-100%), but sensitivity was limited (range, 14%-59%). Periappendiceal fat stranding was the only feature that showed high sensitivity (94%; 95% confidence interval: 86%, 98%) but low specificity (40%; 95% confidence interval, 23%, 60%). Conclusion Ten informative CT features for differentiating complicated appendicitis were identified in this study, nine of which showed high specificity, but low sensitivity. © RSNA, 2017 Online supplemental material is available for this article.

  10. Image processing and machine learning for fully automated probabilistic evaluation of medical images.

    PubMed

    Sajn, Luka; Kukar, Matjaž

    2011-12-01

    The paper presents results of our long-term study on using image processing and data mining methods in a medical imaging. Since evaluation of modern medical images is becoming increasingly complex, advanced analytical and decision support tools are involved in integration of partial diagnostic results. Such partial results, frequently obtained from tests with substantial imperfections, are integrated into ultimate diagnostic conclusion about the probability of disease for a given patient. We study various topics such as improving the predictive power of clinical tests by utilizing pre-test and post-test probabilities, texture representation, multi-resolution feature extraction, feature construction and data mining algorithms that significantly outperform medical practice. Our long-term study reveals three significant milestones. The first improvement was achieved by significantly increasing post-test diagnostic probabilities with respect to expert physicians. The second, even more significant improvement utilizes multi-resolution image parametrization. Machine learning methods in conjunction with the feature subset selection on these parameters significantly improve diagnostic performance. However, further feature construction with the principle component analysis on these features elevates results to an even higher accuracy level that represents the third milestone. With the proposed approach clinical results are significantly improved throughout the study. The most significant result of our study is improvement in the diagnostic power of the whole diagnostic process. Our compound approach aids, but does not replace, the physician's judgment and may assist in decisions on cost effectiveness of tests. Copyright © 2010 Elsevier Ireland Ltd. All rights reserved.

  11. Thermal infrared spectroscopy and modeling of experimentally shocked plagioclase feldspars

    USGS Publications Warehouse

    Johnson, J. R.; Horz, F.; Staid, M.I.

    2003-01-01

    Thermal infrared emission and reflectance spectra (250-1400 cm-1; ???7???40 ??m) of experimentally shocked albite- and anorthite-rich rocks (17-56 GPa) demonstrate that plagioclase feldspars exhibit characteristic degradations in spectral features with increasing pressure. New measurements of albite (Ab98) presented here display major spectral absorptions between 1000-1250 cm-1 (8-10 ??m) (due to Si-O antisymmetric stretch motions of the silica tetrahedra) and weaker absorptions between 350-700 cm-1 (14-29 ??m) (due to Si-O-Si octahedral bending vibrations). Many of these features persist to higher pressures compared to similar features in measurements of shocked anorthite, consistent with previous thermal infrared absorption studies of shocked feldspars. A transparency feature at 855 cm-1 (11.7 ??m) observed in powdered albite spectra also degrades with increasing pressure, similar to the 830 cm-1 (12.0 ??m) transparency feature in spectra of powders of shocked anorthite. Linear deconvolution models demonstrate that combinations of common mineral and glass spectra can replicate the spectra of shocked anorthite relatively well until shock pressures of 20-25 GPa, above which model errors increase substantially, coincident with the onset of diaplectic glass formation. Albite deconvolutions exhibit higher errors overall but do not change significantly with pressure, likely because certain clay minerals selected by the model exhibit absorption features similar to those in highly shocked albite. The implication for deconvolution of thermal infrared spectra of planetary surfaces (or laboratory spectra of samples) is that the use of highly shocked anorthite spectra in end-member libraries could be helpful in identifying highly shocked calcic plagioclase feldspars.

  12. VUV absorption spectroscopy measurements of the role of fast neutral atoms in a high-power gap breakdown

    NASA Astrophysics Data System (ADS)

    Filuk, A. B.; Bailey, J. E.; Cuneo, M. E.; Lake, P. W.; Nash, T. J.; Noack, D. D.; Maron, Y.

    2000-12-01

    The maximum power achieved in a wide variety of high-power devices, including electron and ion diodes, z pinches, and microwave generators, is presently limited by anode-cathode gap breakdown. A frequently discussed hypothesis for this effect is ionization of fast neutral atoms injected throughout the anode-cathode gap during the power pulse. We describe a newly developed diagnostic tool that provides a direct test of this hypothesis. Time-resolved vacuum-ultraviolet absorption spectroscopy is used to directly probe fast neutral atoms with 1-mm spatial resolution in the 10-mm anode-cathode gap of the SABRE 5 MV, 1 TW applied-B ion diode. Absorption spectra collected during Ar RF glow discharges and with CO2 gas fills confirm the reliability of the diagnostic technique. Throughout the 50-100 ns ion diode pulses no measurable neutral absorption was seen, setting upper limits of (0.12-1.5)×1014 cm-3 for ground-state fast neutral atom densities of H, C, N, O, and F. The absence of molecular absorption bands also sets upper limits of (0.16-1.2)×1015 cm-3 for common simple molecules. These limits are low enough to rule out ionization of fast neutral atoms as a breakdown mechanism. Breakdown due to ionization of molecules is also found to be unlikely. This technique can now be applied to quantify the role of neutral atoms in other high-power devices.

  13. VUV absorption spectroscopy measurements of the role of fast neutral atoms in high-power gap breakdown

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    FILUK,A.B.; BAILEY,JAMES E.; CUNEO,MICHAEL E.

    The maximum power achieved in a wide variety of high-power devices, including electron and ion diodes, z pinches, and microwave generators, is presently limited by anode-cathode gap breakdown. A frequently-discussed hypothesis for this effect is ionization of fast neutral atoms injected throughout the anode-cathode gap during the power pulse. The authors describe a newly-developed diagnostic tool that provides the first direct test of this hypothesis. Time-resolved vacuum-ultraviolet absorption spectroscopy is used to directly probe fast neutral atoms with 1 mm spatial resolution in the 10 mm anode-cathode gap of the SABRE 5 MV, 1 TW applied-B ion diode. Absorption spectramore » collected during Ar RF glow discharges and with CO{sub 2} gas fills confirm the reliability of the diagnostic technique. Throughout the 50--100 ns ion diode pulses no measurable neutral absorption is seen, setting upper limits of 0.12--1.5 x 10{sup 14} cm{sup {minus}3} for ground state fast neutral atom densities of H, C, N, O, F. The absence of molecular absorption bands also sets upper limits of 0.16--1.2 x 10{sup 15} cm{sup {minus}3} for common simple molecules. These limits are low enough to rule out ionization throughout the gap as a breakdown mechanism. This technique can now be applied to quantify the role of neutral atoms in other high-power devices.« less

  14. Accuracy of computed tomographic features in differentiating intestinal tuberculosis from Crohn's disease: a systematic review with meta-analysis.

    PubMed

    Kedia, Saurabh; Sharma, Raju; Sreenivas, Vishnubhatla; Madhusudhan, Kumble Seetharama; Sharma, Vishal; Bopanna, Sawan; Pratap Mouli, Venigalla; Dhingra, Rajan; Yadav, Dawesh Prakash; Makharia, Govind; Ahuja, Vineet

    2017-04-01

    Abdominal computed tomography (CT) can noninvasively image the entire gastrointestinal tract and assess extraintestinal features that are important in differentiating Crohn's disease (CD) and intestinal tuberculosis (ITB). The present meta-analysis pooled the results of all studies on the role of CT abdomen in differentiating between CD and ITB. We searched PubMed and Embase for all publications in English that analyzed the features differentiating between CD and ITB on abdominal CT. The features included comb sign, necrotic lymph nodes, asymmetric bowel wall thickening, skip lesions, fibrofatty proliferation, mural stratification, ileocaecal area, long segment, and left colonic involvements. Sensitivity, specificity, positive and negative likelihood ratios, and diagnostic odds ratio (DOR) were calculated for all the features. Symmetric receiver operating characteristic curve was plotted for features present in >3 studies. Heterogeneity and publication bias was assessed and sensitivity analysis was performed by excluding studies that compared features on conventional abdominal CT instead of CT enterography (CTE). We included 6 studies (4 CTE, 1 conventional abdominal CT, and 1 CTE+conventional abdominal CT) involving 417 and 195 patients with CD and ITB, respectively. Necrotic lymph nodes had the highest diagnostic accuracy (sensitivity, 23%; specificity, 100%; DOR, 30.2) for ITB diagnosis, and comb sign (sensitivity, 82%; specificity, 81%; DOR, 21.5) followed by skip lesions (sensitivity, 86%; specificity, 74%; DOR, 16.5) had the highest diagnostic accuracy for CD diagnosis. On sensitivity analysis, the diagnostic accuracy of other features excluding asymmetric bowel wall thickening remained similar. Necrotic lymph nodes and comb sign on abdominal CT had the best diagnostic accuracy in differentiating CD and ITB.

  15. Iron alteration minerals in the visible and near-infrared spectra of low-albedo asteroids

    NASA Technical Reports Server (NTRS)

    Vilas, Faith; Jarvis, Kandy S.; Gaffey, Michael J.

    1994-01-01

    Absorption features centered near 0.60-0.65 and 0.80-0.90 micrometers have been identified in the spectra of five low-albedo main-belt and outer-belt asteroids. These absorption features are attributed respectively to the (6)A(sub 1) goes to (4)T(sub 2)(G) and (6)A(sub 1) goes to (4)T(sub 1)(G) charge transfer transitions in minerals such as goethite, hematite, and jarosite that are products of the aqueous alteration of anhydrous silicates. A shoulder near 0.63 micrometers has also been identified in the absorption feature centered near 0.7 micrometers attributed to oxidized iron in phyllosilicates found predominantly in C- and G-class asteroids reflectance spectra. The coexistence of iron oxides with phyllosilicates in asteroids believed to have undergone aqueous alteration would be expected based upon analogy with terrestrial aqueous alteration and the observed mineralogy of carbonaceous chondrites. The number of low-albedo asteroids having only iron alteration absorption features compared to the number of low-albedo asteroids having spectral characteristics indicative of phyllosilicates is small. Either the conditions under which these asteroids formed are rare, or the iron alteration minerals could be formed in the interiors of objects where phyllosilicates dominate the surface mineralogy.

  16. Measurements of reflectance spectra of ion-bombarded ice and application to surfaces in the outer solar system

    NASA Technical Reports Server (NTRS)

    O'Shaughnessy, D. J.; Boring, J. W.; Johnson, R. E.

    1988-01-01

    The first results of laboratory measurements of the wavelength dependence of the alternation of the visible reflectance of H2O ice irradiated by keV ions are presented. When the implanted species is chemically neutral, absorption is slightly enhanced below 0.55 micron. For an incident species containing sulfur, a strong absorption feature is produced at 0.4 micron, probably corresponding to S3. This occurs at too large a wavelength to account for the absorption feature observed at Europa by Voyager and therefore casts doubt on the recent interpretation of the reflectance data of Europa.

  17. Voyager 1 imaging and IRIS observations of Jovian methane absorption and thermal emission: Implications for cloud structure

    NASA Technical Reports Server (NTRS)

    West, R. A.; Kupferman, P. N.; Hart, H.

    1984-01-01

    Images from three filters of the Voyager 1 wide angle camera are used to measure the continuum reflectivity and spectral gradient near 6000 A and the 6190 A band methane/continuum ratio for a variety of cloud features in Jupiter's atmosphere. The dark barge features in the North Equatorial Belt have anomalously strong positive continuum spectral gradients suggesting unique composition. Methane absorption is shown at unprecedented spatial scales for the Great Red Spot and its immediate environment, for a dark barge feature in the North Equatorial Belt, and for two hot spot and plume regions in the North Equatorial Belt. Methane absorption and five micrometer emission are correlated in the vicinity of the Great Red Spot but are anticorrelated in one of the plume hot spot regions. Methane absorption and simultaneous maps of five micrometer brightness temperature is quantitatively compared to realistic cloud structure models which include multiple scattering at five micrometer as well as in the visible. Variability in H2 quadrupole lines are also investigated.

  18. Voyager 1 imaging and IRIS observations of Jovian methane absorption and thermal emission - Implications for cloud structure

    NASA Technical Reports Server (NTRS)

    West, R. A.; Kupferman, P. N.; Hart, H.

    1985-01-01

    Images from three filters of the Voyager 1 wide angle camera are used to measure the continuum reflectivity and spectral gradient near 6000 A and the 6190 A band methane/continuum ratio for a variety of cloud features in Jupiter's atmosphere. The dark barge features in the North Equatorial Belt have anomalously strong positive continuum spectral gradients suggesting unique composition. Methane absorption is shown at unprecedented spatial scales for the Great Red Spot and its immediate environment, for a dark barge feature in the North Equatorial Belt, and for two hot spot and plume regions in the North Equatorial Belt. Methane absorption and five micrometer emission are correlated in the vicinity of the Great Red Spot but are anticorrelated in one of the plume hot spot regions. Methane absorption and simultaneous maps of five micrometer brightness temperature are quantitatively compared to realistic cloud structure models which include multiple scattering at five micrometer as well as in the visible. Variability in H2 quadrupole lines are also investigated.

  19. Moderately nonlinear ultrasound propagation in blood-mimicking fluid.

    PubMed

    Kharin, Nikolay A; Vince, D Geoffrey

    2004-04-01

    In medical diagnostic ultrasound (US), higher than-in-water nonlinearity of body fluids and tissue usually does not produce strong nonlinearly distorted waves because of the high absorption. The relative influence of absorption and nonlinearity can be characterized by the Gol'dberg number Gamma. There are two limiting cases in nonlinear acoustics: weak waves (Gamma < 1) or strong waves (Gamma > 1). However, at diagnostic frequencies in tissue and body fluids, the nonlinear effects and effects of absorption more likely are comparable (Gol'dberg number Gamma approximately 1). The aim of this work was to study the nonlinear propagation of a moderately nonlinear US second harmonic signal in a blood-mimicking fluid. Quasilinear solutions to the KZK equation are presented, assuming radiation from a flat and geometrically focused circular Gaussian source. The solutions are expressed in a new simplified closed form and are in very good agreement with those of previous studies measuring and modeling Gaussian beams. The solutions also show good agreement with the measurements of the beams produced by commercially available transducers, even without special Gaussian shading.

  20. Excitation of atoms and ions in plasmas by ultra-short electromagnetic pulses

    NASA Astrophysics Data System (ADS)

    Astapenko, V. A.; Sakhno, S. V.; Svita, S. Yu; Lisitsa, V. S.

    2017-02-01

    The problem of atoms and ions diagnostics in rarefied and dense plasmas by ultrashort laser pulses (USP) is under consideration. The application of USP provides: 1) excitation from ground states due to their carrier frequency high enough, 2) penetration into optically dense media due to short pulses duration. The excitation from ground atomic states increases sharply populations of excited atomic states in contrast with standard laser induced fluorescence spectroscopy based on radiative transitions between excited atomic states. New broadening parameter in radiation absorption, namely inverse pulse duration time 1/τ appears in addition to standard line-shape width in the profile G(ω). The Lyman-beta absorption spectra for USP are calculated for Holtsmark static broadening mechanism. Excitation of highly charged H-like ions in hot plasmas is described by both Gaussian shapes for Doppler broadening and pulse spectrum resulting in analytical absorption line-shape. USP penetration into optically thick media and corresponding excitation probability are calculated. It is shown a great effect of USP duration on excitation probabilities in optically thick media. The typical situations for plasma diagnostics by USP are discussed in details.

  1. Underresolved absorption spectroscopy of OH radicals in flames using broadband UV LEDs

    NASA Astrophysics Data System (ADS)

    White, Logan; Gamba, Mirko

    2018-04-01

    A broadband absorption spectroscopy diagnostic based on underresolution of the spectral absorption lines is evaluated for the inference of species mole fraction and temperature in combustion systems from spectral fitting. The approach uses spectrally broadband UV light emitting diodes and leverages low resolution, small form factor spectrometers. Through this combination, the method can be used to develop high precision measurement sensors. The challenges of underresolved spectroscopy are explored and addressed using spectral derivative fitting, which is found to generate measurements with high precision and accuracy. The diagnostic is demonstrated with experimental measurements of gas temperature and OH mole fraction in atmospheric air/methane premixed laminar flat flames. Measurements exhibit high precision, good agreement with 1-D flame simulations, and high repeatability. A newly developed model of uncertainty in underresolved spectroscopy is applied to estimate two-dimensional confidence regions for the measurements. The results of the uncertainty analysis indicate that the errors in the outputs of the spectral fitting procedure are correlated. The implications of the correlation between uncertainties for measurement interpretation are discussed.

  2. Energy absorption buildup factors, exposure buildup factors and Kerma for optically stimulated luminescence materials and their tissue equivalence for radiation dosimetry

    NASA Astrophysics Data System (ADS)

    Singh, Vishwanath P.; Badiger, N. M.

    2014-11-01

    Optically stimulated luminescence (OSL) materials are sensitive dosimetric materials used for precise and accurate dose measurement for low-energy ionizing radiation. Low dose measurement capability with improved sensitivity makes these dosimeters very useful for diagnostic imaging, personnel monitoring and environmental radiation dosimetry. Gamma ray energy absorption buildup factors and exposure build factors were computed for OSL materials using the five-parameter Geometric Progression (G-P) fitting method in the energy range 0.015-15 MeV for penetration depths up to 40 mean free path. The computed energy absorption buildup factor and exposure buildup factor values were studied as a function of penetration depth and incident photon energy. Effective atomic numbers and Kerma relative to air of the selected OSL materials and tissue equivalence were computed and compared with that of water, PMMA and ICRU standard tissues. The buildup factors and kerma relative to air were found dependent upon effective atomic numbers. Buildup factors determined in the present work should be useful in radiation dosimetry, medical diagnostics and therapy, space dosimetry, accident dosimetry and personnel monitoring.

  3. Absorption Filter Based Optical Diagnostics in High Speed Flows

    NASA Technical Reports Server (NTRS)

    Samimy, Mo; Elliott, Gregory; Arnette, Stephen

    1996-01-01

    Two major regimes where laser light scattered by molecules or particles in a flow contains significant information about the flow are Mie scattering and Rayleigh scattering. Mie scattering is used to obtain only velocity information, while Rayleigh scattering can be used to measure both the velocity and the thermodynamic properties of the flow. Now, recently introduced (1990, 1991) absorption filter based diagnostic techniques have started a new era in flow visualization, simultaneous velocity and thermodynamic measurements, and planar velocity measurements. Using a filtered planar velocimetry (FPV) technique, we have modified the optically thick iodine filter profile of Miles, et al., and used it in the pressure-broaden regime which accommodates measurements in a wide range of velocity applications. Measuring velocity and thermodynamic properties simultaneously, using absorption filtered based Rayleigh scattering, involves not only the measurement of the Doppler shift, but also the spectral profile of the Rayleigh scattering signal. Using multiple observation angles, simultaneous measurement of one component velocity and thermodynamic properties in a supersonic jet were measured. Presently, the technique is being extended for simultaneous measurements of all three components of velocity and thermodynamic properties.

  4. Using principal component analysis to understand the variability of PDS 456

    NASA Astrophysics Data System (ADS)

    Parker, M. L.; Reeves, J. N.; Matzeu, G. A.; Buisson, D. J. K.; Fabian, A. C.

    2018-02-01

    We present a spectral-variability analysis of the low-redshift quasar PDS 456 using principal component analysis. In the XMM-Newton data, we find a strong peak in the first principal component at the energy of the Fe absorption line from the highly blueshifted outflow. This indicates that the absorption feature is more variable than the continuum, and that it is responding to the continuum. We find qualitatively different behaviour in the Suzaku data, which is dominated by changes in the column density of neutral absorption. In this case, we find no evidence of the absorption produced by the highly ionized gas being correlated with this variability. Additionally, we perform simulations of the source variability, and demonstrate that PCA can trivially distinguish between outflow variability correlated, anticorrelated and un-correlated with the continuum flux. Here, the observed anticorrelation between the absorption line equivalent width and the continuum flux may be due to the ionization of the wind responding to the continuum. Finally, we compare our results with those found in the narrow-line Seyfert 1 IRAS 13224-3809. We find that the Fe K UFO feature is sharper and more prominent in PDS 456, but that it lacks the lower energy features from lighter elements found in IRAS 13224-3809, presumably due to differences in ionization.

  5. Ionized absorbers, ionized emitters, and the X-ray spectrum of active galactic nuclei

    NASA Technical Reports Server (NTRS)

    Netzer, Hagai

    1993-01-01

    Broad absorption features are common in the X-ray spectrum of low-luminosity AGNs. The features have been modeled by leaky neutral absorbers or by highly ionized gas that completely occult the continuum source. Such models are incomplete since they do not take into account all the physical processes in the gas. In particular, no previous model included the X-ray emission by the ionized absorbing gas and the reflection of the continuum source radiation. The present work discusses the emission, absorption, and reflection properties of photoionized gases with emphasis on conditions thought to prevail in AGNs. It shows that such gas is likely to produce intense X-ray line and continuum radiation and to reflect a sizable fraction of the nonstellar continuum at all energies. If such gas is indeed responsible for the observed X-ray absorption, then absorption edges are much weaker than commonly assumed, and some residual X-ray continuum is likely to be observed even if the line of sight is completely blocked. Moreover, X-ray emission features may show up in sources not showing X-ray absorption. This has immense consequences for medium-resolution X-ray missions, such as BBXRT and Astro-D, and for the planned high-resolution experiments on board XMM and AXAF.

  6. How Necessary Are the Stripes of a Tiger? Diagnostic and Characteristic Features in an fMRI Study of Word Meaning

    ERIC Educational Resources Information Center

    Grossman, Murray; Troiani, Vanessa; Koenig, Phyllis; Work, Melissa; Moore, Peachie

    2007-01-01

    This study contrasted two approaches to word meaning: the statistically determined role of high-contribution features like "striped" in the meaning of complex nouns like "tiger" typically used in studies of semantic memory, and the contribution of diagnostic features like "parent's brother" that play a critical role in the meaning of nominal kinds…

  7. Identification of mineral composition and weathering product of tuff using reflectance spectroscopy

    NASA Astrophysics Data System (ADS)

    Hyun, C.; Park, H.

    2009-12-01

    Tuff is intricately composed of various types of rock blocks and ash matrixes during volcanic formation processes. Qualitative identification and quantitative assessment of mineral composition of tuff usually have been done using manual inspection with naked-eyes and various chemical analyses. Those conventional methods are destructive to objects, time consuming and sometimes carry out biased results from subjective decision making. To overcome limits from conventional methods, assessment technique using reflectance spectroscopy was applied to tuff specimens. Reflectance spectroscopy measures electromagnetic reflectance on rock surface and can extract diagnostic absorption features originated from chemical composition and crystal structure of constituents in the reflectance curve so mineral species can be discriminated qualitatively. The intrinsic absorption feature from particular mineral can be converted to absorption depth representing relative coverage of the mineral in the measurement area by removing delineated convex hull from raw reflectance curve. The spectral measurements were performed with field spectrometer FieldSpec®3 of ASD Inc. and the wavelength range of measurement was form 350nm to 2500nm. Three types of tuff blocks, ash tuff, green lapilli tuff and red lapilli tuff, were sampled from Hwasun County in Korea and the types of tuffs. The differences between green tuff and red tuff are from the color of their matrixes. Ash tuff consists of feldspars and quartz and small amount of chalcedony, calcite, dolomite, epidote and basalt fragments. Green lapilli tuff consists of feldspar, quartz and muscovite and small amount of calcite, chalcedony, sericite, chlorite, quartzite and basalt fragments. Red lapilli tuff consists of feldspar, quartz and muscovite and small amount of calcite, chalcedony, limonite, zircon, chlorite, quartzite and basalt fragments. The tuff rocks were coarsely crushed and blocks and matrixes were separated to measure standard spectral reflectance of each constituent. Unmixing of mineral composition and their weathering products of blocks and matrixes in tuff were conducted and the ratio of mineral composition was calculated for each specimen. This study was supported by National Research Institute of Cultural Heritage (project title: Development on Evaluation Technology for Weathering Degree of Stone Cultural Properties, project no.: 09B011Y-00150-2009).

  8. Laser Irradiated Foam Targets: Absorption and Radiative Properties

    NASA Astrophysics Data System (ADS)

    Salvadori, Martina; Luigi Andreoli, Pier; Cipriani, Mattia; Consoli, Fabrizio; Cristofari, Giuseppe; De Angelis, Riccardo; di Giorgio, Giorgio; Giulietti, Danilo; Ingenito, Francesco; Gus'kov, Sergey Yu.; Rupasov, Alexander A.

    2018-01-01

    An experimental campaign to characterize the laser radiation absorption of foam targets and the subsequent emission of radiation from the produced plasma was carried out in the ABC facility of the ENEA Research Center in Frascati (Rome). Different targets have been used: plastic in solid or foam state and aluminum targets. The activated different diagnostics allowed to evaluate the plasma temperature, the density distribution, the fast particle spectrum and the yield of the X-Ray radiation emitted by the plasma for the different targets. These results confirm the foam homogenization action on laser-plasma interaction, mainly attributable to the volume absorption of the laser radiation propagating in such structured materials. These results were compared with simulation absorption models of the laser propagating into a foam target.

  9. Minority carrier diffusion lengths and absorption coefficients in silicon sheet material

    NASA Technical Reports Server (NTRS)

    Dumas, K. A.; Swimm, R. T.

    1980-01-01

    Most of the methods which have been developed for the measurement of the minority carrier diffusion length of silicon wafers require that the material have either a Schottky or an ohmic contact. The surface photovoltage (SPV) technique is an exception. The SPV technique could, therefore, become a valuable diagnostic tool in connection with current efforts to develop low-cost processes for the production of solar cells. The technique depends on a knowledge of the optical absorption coefficient. The considered investigation is concerned with a reevaluation of the absorption coefficient as a function of silicon processing. A comparison of absorption coefficient values showed these values to be relatively consistent from sample to sample, and independent of the sample growth method.

  10. Feasibility of streamlining an interactive Bayesian-based diagnostic support tool designed for clinical practice

    NASA Astrophysics Data System (ADS)

    Chen, Po-Hao; Botzolakis, Emmanuel; Mohan, Suyash; Bryan, R. N.; Cook, Tessa

    2016-03-01

    In radiology, diagnostic errors occur either through the failure of detection or incorrect interpretation. Errors are estimated to occur in 30-35% of all exams and contribute to 40-54% of medical malpractice litigations. In this work, we focus on reducing incorrect interpretation of known imaging features. Existing literature categorizes cognitive bias leading a radiologist to an incorrect diagnosis despite having correctly recognized the abnormal imaging features: anchoring bias, framing effect, availability bias, and premature closure. Computational methods make a unique contribution, as they do not exhibit the same cognitive biases as a human. Bayesian networks formalize the diagnostic process. They modify pre-test diagnostic probabilities using clinical and imaging features, arriving at a post-test probability for each possible diagnosis. To translate Bayesian networks to clinical practice, we implemented an entirely web-based open-source software tool. In this tool, the radiologist first selects a network of choice (e.g. basal ganglia). Then, large, clearly labeled buttons displaying salient imaging features are displayed on the screen serving both as a checklist and for input. As the radiologist inputs the value of an extracted imaging feature, the conditional probabilities of each possible diagnosis are updated. The software presents its level of diagnostic discrimination using a Pareto distribution chart, updated with each additional imaging feature. Active collaboration with the clinical radiologist is a feasible approach to software design and leads to design decisions closely coupling the complex mathematics of conditional probability in Bayesian networks with practice.

  11. Airborne spectroradiometry: The application of AIS data to detecting subtle mineral absorption features

    NASA Technical Reports Server (NTRS)

    Cocks, T. D.; Green, A. A.

    1986-01-01

    Analysis of Airborne Imaging Spectrometer (AIS) data acquired in Australia has revealed a number of operational problems. Horizontal striping in AIS imagery and spectral distortions due to order overlap were investigated. Horizontal striping, caused by grating position errors can be removed with little or no effect on spectral details. Order overlap remains a problem that seriously compromises identification of subtle mineral absorption features within AIS spectra. A spectrometric model of the AIS was developed to assist in identifying spurious spectral features, and will be used in efforts to restore the spectral integrity of the data.

  12. Iron K Features in the Quasar E 1821+643: Evidence for Gravitationally Redshifted Absorption?

    NASA Technical Reports Server (NTRS)

    Yaqoob, Tahir; Serlemitsos, Peter

    2005-01-01

    We report a Chandra high-energy grating detection of a narrow, redshifted absorption line superimposed on the red wing of a broad Fe K line in the z = 0.297 quasar E 1821+643. The absorption line is detected at a confidence level, estimated by two different methods, in the range approx. 2 - 3 sigma. Although the detection significance is not high enough to exclude a non-astrophysical origin, accounting for the absorption feature when modeling the X-ray spectrum implies that the Fe-K emission line is broad, and consistent with an origin in a relativistic accretion disk. Ignoring the apparent absorption feature leads to the conclusion that the Fe-K emission line is narrower, and also affects the inferred peak energy of the line (and hence the inferred ionization state of Fe). If the absorption line (at approx. 6.2 keV in the quasar frame) is real, we argue that it could be due to gravitationally redshifted Fe XXV or Fe XXVI resonance absorption within approx. 10 - 20 gravitational radii of the putative central black hole. The absorption line is not detected in earlier ASCA and Chandra low-energy grating observations, but the absorption line is not unequivocally ruled out by these data. The Chandra high-energy grating Fe-K emission line is consistent with an origin predominantly in Fe I-XVII or so. In an ASCA observation eight years earlier, the Fe-K line peaked at approx. 6.6 keV, closer to the energies of He-like Fe triplet lines. Further, in a Chandra low-energy grating observation the Fe-K line profile was double-peaked, one peak corresponding to Fe I-XVII or so, the other peak to Fe XXVI Ly alpha. Such a wide range in ionization state of Fe is not ruled out by the HEG and ASCA data either, and is suggestive of a complex structure for the line-emitter.

  13. Evaluation of wavelet spectral features in pathological detection and discrimination of yellow rust and powdery mildew in winter wheat with hyperspectral reflectance data

    NASA Astrophysics Data System (ADS)

    Shi, Yue; Huang, Wenjiang; Zhou, Xianfeng

    2017-04-01

    Hyperspectral absorption features are important indicators of characterizing plant biophysical variables for the automatic diagnosis of crop diseases. Continuous wavelet analysis has proven to be an advanced hyperspectral analysis technique for extracting absorption features; however, specific wavelet features (WFs) and their relationship with pathological characteristics induced by different infestations have rarely been summarized. The aim of this research is to determine the most sensitive WFs for identifying specific pathological lesions from yellow rust and powdery mildew in winter wheat, based on 314 hyperspectral samples measured in field experiments in China in 2002, 2003, 2005, and 2012. The resultant WFs could be used as proxies to capture the major spectral absorption features caused by infestation of yellow rust or powdery mildew. Multivariate regression analysis based on these WFs outperformed conventional spectral features in disease detection; meanwhile, a Fisher discrimination model exhibited considerable potential for generating separable clusters for each infestation. Optimal classification returned an overall accuracy of 91.9% with a Kappa of 0.89. This paper also emphasizes the WFs and their relationship with pathological characteristics in order to provide a foundation for the further application of this approach in monitoring winter wheat diseases at the regional scale.

  14. Io: Near-Infrared Absorptions Not Attributable to SO2

    NASA Astrophysics Data System (ADS)

    Shirley, J. H.; Clark, R. N.; Soderblom, L. A.; Carlson, R. W.; Kamp, L. W.; Galileo NIMS Team

    2001-11-01

    The Near-Infrared Mapping Spectrometer (NIMS) onboard the Galileo spacecraft imaged the leading side of Jupiter's satellite Io at full spectral resolution and with triple Nyquist spatial sampling during the fifteenth orbital encounter (E15). New despiking and "dejittering" algorithms have been applied to this high S/N observation (15INHRSPEC01A). Spectral absorption features not attributable to SO2 are found between 3.0-3.4 microns and near 4.65 microns. The patterns of the spatial distributions of both absorbers differ from that of the omnipresent SO2. The broad 3.0-3.4 micron absorption is most pronounced in polar regions. Preliminary work suggests that the 4.65 micron feature may be associated with an unidentified sulfate mineral, while the 3.0-3.4 micron feature may result from the presence of more than one absorbing material. Hydrogen-bearing species are likely candidates. For example, H2O ice provides a good match for the absorption near 3.2 microns, but the absorption is shifted to wavelengths longer than that in pure H2O ice. If only one absorber is present, then hydrogen bonding of small numbers of H2O molecules could perhaps account for the shift. The absorption is weak; if H20 related, optical path lengths of a fraction of a micron are indicated. Portions of this research were carried out at the Jet Propulsion Laboratory, California Institute of Technology, under a contract with the National Aeronautics and Space Administration.

  15. Attosecond transient absorption of argon atoms in the vacuum ultraviolet region: line energy shifts versus coherent population transfer

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Cao, Wei; Warrick, Erika R.; Neumark, Daniel M.

    Using attosecond transient absorption, the dipole response of an argon atom in the vacuum ultraviolet (VUV) region is studied when an external electromagnetic field is present. An isolated attosecond VUV pulse populates Rydberg states lying 15 eV above the argon ground state. A synchronized few-cycle near infrared (NIR) pulse modifies the oscillating dipoles of argon impulsively, leading to alterations in the VUV absorption spectra. As the NIR pulse is delayed with respect to the VUV pulse, multiple features in the absorption profile emerge simultaneously including line broadening, sideband structure, sub-cycle fast modulations, and 5-10 fs slow modulations. These features indicatemore » the coexistence of two general processes of the light-matter interaction: the energy shift of individual atomic levels and coherent population transfer between atomic eigenstates, revealing coherent superpositions. Finally, an intuitive formula is derived to treat both effects in a unifying framework, allowing one to identify and quantify the two processes in a single absorption spectrogram.« less

  16. Attosecond transient absorption of argon atoms in the vacuum ultraviolet region: line energy shifts versus coherent population transfer

    NASA Astrophysics Data System (ADS)

    Cao, Wei; Warrick, Erika R.; Neumark, Daniel M.; Leone, Stephen R.

    2016-01-01

    Using attosecond transient absorption, the dipole response of an argon atom in the vacuum ultraviolet (VUV) region is studied when an external electromagnetic field is present. An isolated attosecond VUV pulse populates Rydberg states lying 15 eV above the argon ground state. A synchronized few-cycle near infrared (NIR) pulse modifies the oscillating dipoles of argon impulsively, leading to alterations in the VUV absorption spectra. As the NIR pulse is delayed with respect to the VUV pulse, multiple features in the absorption profile emerge simultaneously including line broadening, sideband structure, sub-cycle fast modulations, and 5-10 fs slow modulations. These features indicate the coexistence of two general processes of the light-matter interaction: the energy shift of individual atomic levels and coherent population transfer between atomic eigenstates, revealing coherent superpositions. An intuitive formula is derived to treat both effects in a unifying framework, allowing one to identify and quantify the two processes in a single absorption spectrogram.

  17. Attosecond transient absorption of argon atoms in the vacuum ultraviolet region: line energy shifts versus coherent population transfer

    DOE PAGES

    Cao, Wei; Warrick, Erika R.; Neumark, Daniel M.; ...

    2016-01-18

    Using attosecond transient absorption, the dipole response of an argon atom in the vacuum ultraviolet (VUV) region is studied when an external electromagnetic field is present. An isolated attosecond VUV pulse populates Rydberg states lying 15 eV above the argon ground state. A synchronized few-cycle near infrared (NIR) pulse modifies the oscillating dipoles of argon impulsively, leading to alterations in the VUV absorption spectra. As the NIR pulse is delayed with respect to the VUV pulse, multiple features in the absorption profile emerge simultaneously including line broadening, sideband structure, sub-cycle fast modulations, and 5-10 fs slow modulations. These features indicatemore » the coexistence of two general processes of the light-matter interaction: the energy shift of individual atomic levels and coherent population transfer between atomic eigenstates, revealing coherent superpositions. Finally, an intuitive formula is derived to treat both effects in a unifying framework, allowing one to identify and quantify the two processes in a single absorption spectrogram.« less

  18. Ca II and Na I absorption in the QSO S4 0248 + 430 due to an intervening galaxy

    NASA Technical Reports Server (NTRS)

    Womble, Donna S.; Junkkarinen, Vesa T.; Cohen, Ross D.; Burbidge, E. Margaret

    1990-01-01

    Observations of the QSO S4 0248 + 430 and a nearby anonymous galaxy are presented. Two absorption components are found in both Ca II H and K and Na I D1 and D2 at z(a) = 0.0515, 0.0523. Column densities of log N(Ca II) = 13.29, 13.50, and log N(Na I) = 13.79, 14.18 are found for z(a) = 0.0515, 0.0523 absorption systems, respectively. The column density ratios imply considerable calcium depletion and disk-type absorbing gas. At least one and possibly both absorption components are produced by high-velocity gas. A broadband image of the field shows an asymmetrical armlike feature or possible tidal tail covering and extending past the position of the QSO. The presence of this extended feature and the apparent difference between the absorption velocities and galaxy rotation velocity suggest that the absorbing gas is not ordinary disk gas, but rather is a result of tidal disruption.

  19. A Novel Optical Diagnostic for In Situ Measurements of Lithium Polysulfides in Battery Electrolytes.

    PubMed

    Saqib, Najmus; Silva, Cody J; Maupin, C Mark; Porter, Jason M

    2017-07-01

    An optical diagnostic technique to determine the order and concentration of lithium polysulfides in lithium-sulfur (Li-S) battery electrolytes has been developed. One of the major challenges of lithium-sulfur batteries is the problem of polysulfide shuttling between the electrodes, which leads to self-discharge and loss of active material. Here we present an optical diagnostic for quantitative in situ measurements of lithium polysulfides using attenuated total reflection Fourier transform infrared (FT-IR) spectroscopy. Simulated infrared spectra of lithium polysulfide molecules were generated using computational quantum chemistry routines implemented in Gaussian 09. The theoretical spectra served as a starting point for experimental characterization of lithium polysulfide solutions synthesized by the direct reaction of lithium sulfide and sulfur. Attenuated total reflection FT-IR spectroscopy was used to measure absorption spectra. The lower limit of detection with this technique is 0.05 M. Measured spectra revealed trends with respect to polysulfide order and concentration, consistent with theoretical predictions, which were used to develop a set of equations relating the order and concentration of lithium polysulfides in a sample to the position and area of a characteristic infrared absorption band. The diagnostic routine can measure the order and concentration to within 5% and 0.1 M, respectively.

  20. Excited state absorption spectra of dissolved and aggregated distyrylbenzene: A TD-DFT state and vibronic analysis

    NASA Astrophysics Data System (ADS)

    Oliveira, Eliezer Fernando; Shi, Junqing; Lavarda, Francisco Carlos; Lüer, Larry; Milián-Medina, Begoña; Gierschner, Johannes

    2017-07-01

    A time-dependent density functional theory study is performed to reveal the excited state absorption (ESA) features of distyrylbenzene (DSB), a prototype π-conjugated organic oligomer. Starting with a didactic insight to ESA based on simple molecular orbital and configuration considerations, the performance of various density functional theory functionals is tested to reveal the full vibronic ESA features of DSB at short and long probe delay times.

  1. [Diagnosis and differential diagnostic features of gender identity disorder].

    PubMed

    Kórász, Krisztián; Simon, Lajos

    2008-01-01

    Gender identity disorder, or transsexualism as it is more commonly known, is a highly complex clinical entity. It is an identifiable and incapacitating disease which can be diagnosed and successfully treated by reassignment surgery. The diagnosis of gender identity disorder can be a difficult process. Transsexual patients will have to undergo extensive psychiatric assessment. The authors review the development of nosology of transsexualism. The current classification systems, symptoms and diagnostic features of gender identity disorders are discussed. The article also discusses differential diagnostic features, like intersex states, psychosis, transvestitism, autogynephilia, gynandromorphophilia, and self-amputation. The authors also discuss the problem of comorbidity, as well.

  2. Diagnostic and prognostic value of history-taking and physical examination in undifferentiated peripheral inflammatory arthritis: a systematic review.

    PubMed

    Kuriya, Bindee; Villeneuve, Edith; Bombardier, Claire

    2011-03-01

    To review the diagnostic and prognostic value of history/physical examination among patients with undifferentiated peripheral inflammatory arthritis (UPIA). We conducted a systematic review evaluating the association between history/physical examination features and a diagnostic or prognostic outcome. Nineteen publications were included. Advanced age, female sex, and morning stiffness were predictive of a diagnosis of rheumatoid arthritis (RA) from UPIA. A higher number of tender and swollen joints, small/large joint involvement in the upper/lower extremities, and symmetrical involvement were associated with progression to RA. Similar features were associated with persistent disease and erosions, while disability at baseline and extraarticular features were predictive of future disability. History/physical examination features are heterogeneously reported. Several features predict progression from UPIA to RA or a poor prognosis. Continued measurements in the UPIA population are needed to determine if these features are valid and reliable predictors of outcomes, especially as new definitions for RA and disease states emerge.

  3. Breast Cancer Detection with Reduced Feature Set.

    PubMed

    Mert, Ahmet; Kılıç, Niyazi; Bilgili, Erdem; Akan, Aydin

    2015-01-01

    This paper explores feature reduction properties of independent component analysis (ICA) on breast cancer decision support system. Wisconsin diagnostic breast cancer (WDBC) dataset is reduced to one-dimensional feature vector computing an independent component (IC). The original data with 30 features and reduced one feature (IC) are used to evaluate diagnostic accuracy of the classifiers such as k-nearest neighbor (k-NN), artificial neural network (ANN), radial basis function neural network (RBFNN), and support vector machine (SVM). The comparison of the proposed classification using the IC with original feature set is also tested on different validation (5/10-fold cross-validations) and partitioning (20%-40%) methods. These classifiers are evaluated how to effectively categorize tumors as benign and malignant in terms of specificity, sensitivity, accuracy, F-score, Youden's index, discriminant power, and the receiver operating characteristic (ROC) curve with its criterion values including area under curve (AUC) and 95% confidential interval (CI). This represents an improvement in diagnostic decision support system, while reducing computational complexity.

  4. Histological features associated with diagnostic agreement in atypical ductal hyperplasia of the breast: illustrative cases from the B-Path study.

    PubMed

    Allison, Kimberly H; Rendi, Mara H; Peacock, Sue; Morgan, Tom; Elmore, Joann G; Weaver, Donald L

    2016-12-01

    This study examined the case-specific characteristics associated with interobserver diagnostic agreement in atypical ductal hyperplasia (ADH) of the breast. Seventy-two test set cases with a consensus diagnosis of ADH from the B-Path study were evaluated. Cases were scored for 17 histological features, which were then correlated with the participant agreement with the consensus ADH diagnosis. Participating pathologists' perceptions of case difficulty, borderline features or whether they would obtain a second opinion were also examined for associations with agreement. Of the 2070 participant interpretations of the 72 consensus ADH cases, 48% were scored by participants as difficult and 45% as borderline between two diagnoses; the presence of both of these features was significantly associated with increased agreement (P < 0.001). A second opinion would have been obtained in 80% of interpretations, and this was associated with increased agreement (P < 0.001). Diagnostic agreement ranged from 10% to 89% on a case-by-case basis. Cases with papillary lesions, cribriform architecture and obvious cytological monotony were associated with higher agreement. Lower agreement rates were associated with solid or micropapillary architecture, borderline cytological monotony, or cases without a diagnostic area that was obvious on low power. The results of this study suggest that pathologists frequently recognize the challenge of ADH cases, with some cases being more prone to diagnostic variability. In addition, there are specific histological features associated with diagnostic agreement on ADH cases. Multiple example images from cases in this test set are provided to serve as educational illustrations of these challenges. © 2016 John Wiley & Sons Ltd.

  5. Histologic Features associated with Diagnostic Agreement in Atypical Ductal Hyperplasia of the Breast: Illustrative Cases from the B-Path Study

    PubMed Central

    Allison, Kimberly H.; Rendi, Mara H.; Peacock, Sue; Morgan, Tom; Elmore, Joann G.; Weaver, Donald L.

    2016-01-01

    Background Case specific characteristics associated with interobserver diagnostic agreement in atypical ductal hyperplasia (ADH) of the breast are poorly understood. Methods Seventy-two test set cases with a consensus diagnosis of ADH from the B-Path study were evaluated. Cases were scored for 17 histologic features which were then correlated with the participant agreement with the consensus ADH diagnosis. Participating pathologists’ perceptions of case difficulty, borderline features, or if they would obtain a second opinion were also examined for associations with agreement. Results Of the 2,070 participant interpretations on the 72 consensus ADH cases, 48% were scored by participants as difficult and 45% as borderline between two diagnoses; the presence of both of these features was significantly associated with increased agreement (p < 0.001). A second opinion would have been obtained in 80% of interpretations, and this was associated with increased agreement (p < 0.001). Diagnostic agreement ranged from 10–89% on a case-by-case basis. Cases with papillary lesions, cribriform architecture and obvious cytologic monotony were associated with higher agreement. Lower agreement rates were associated with solid or micro-papillary architecture, borderline cytologic monotony or cases without a diagnostic area that was obvious on low power. Conclusions The results of this study suggest that pathologists frequently recognize the challenge of ADH cases with some cases more prone to diagnostic variability. In addition, there are specific histologic features associated with diagnostic agreement on ADH cases. Multiple example images from cases in this test set are provided to serve as educational illustrations of these challenges. PMID:27398812

  6. Compositional Analyses and Implications of Visible/Near-Infrared Spectra of Outer Irregular Jovian Satellites

    NASA Astrophysics Data System (ADS)

    Vilas, Faith; Hendrix, Amanda

    2017-10-01

    The existence of a visible-near infrared absorption feature attributed to aqueous alteration products has been suggested in both grey and reddened broadband photometry of some outer irregular jovian satellites. Moderate resolution VNIR narrowband spectroscopy was obtained of the jovian irregular satellites JVI Himalia, JVII Elara, JVIII Pasiphae, JIX Sinope, JX Lysithea, JXI Carme, JXII Ananke and JXVII Callirrhoe in 2006, 2008, 2009, and 2010 using the MMT Observatory facility Red Channel spectrograph to confirm the presence of this feature. The spectra are centered near 0.64 μm in order to cover the 0.7-μm feature entirely (generally ranging from 0.57 to 0.83 μm). The spectra generally have a dispersion/element of ~0.6 nm (6Å) some spectra are smoothed. These spectra sample three prograde (i = 28o), four retrograde (i = 149o, 165o) and one independent satellite.We observe these findings among the spectra:- An absorption feature centered near 0.7 µm exists in the spectra of the three prograde (i = 28o) satellites. This feature is spectrally broader than the 0.7-µm feature observed in C-complex asteroids. None appears spectrally reddened. This suggests that these prograde satellites have a common parent body.- A different absorption feature appears in the spectra of the three retrograde (i = 149o) satellites, also suggesting a common parent body. Varying reddening is observed. This feature is similar in spectral location and width to the 0.7-µm feature.- Reddening is observed in the individual observation of JXI Carme (i = 165o), and independent satellite JIX Sinope, similar to the D-class asteroid spectra dominating the Trojan population. A suggested absorption feature is being investigated.Mixing modeling of combinations of both expected and proposed compositions including carbonaceous materials, phyllosilicates, mafic silicates, and other opaque materials, is currently underway. Results will be reported and discussed at the meeting.Acknowledgments: The MMT Observatory is a joint facility of the University of Arizona and the Smithsonian Institution. This research has been supported by SSERVI CLASS.

  7. Comparing the VIRTIS Spectrum of 67P/Churyumov-Gerasimenko to Wild 2 and in Primitive Interplanetary Dust Particles

    NASA Astrophysics Data System (ADS)

    Flynn, George

    2016-04-01

    The Visible and Infrared Thermal Imaging Spectrometer (VIRTIS) instrument, a point spectrometer with high spectral resolution covering the range from 2 to 5 microns, on the ESA Rosetta spacecraft obtained spectra of the surface of Comet 67P/Churyumov-Gerasimenko. The spectral region covered by VIRTIS has been well studied in meteorites, interplanetary dust particles (IDPs) collected by NASA from the Earth's stratosphere, and the samples of Comet 81P/Wild 2 that were delivered to Earth by the NASA Stardust spacecraft. Infrared spectra of the nucleus of Comet 67P/Churyumov-Gerasimenko acquired by VIRTIS show a broad absorption band observed at ~3.3 μm, a region of the spectrum where C-H, O-H, and N-H stretching features occur (Capaccioni et al., 2015). This broad feature is similar to the O-H feature exhibited by hydrous minerals, but shifted to a significantly longer wavelength. Capaccioni et al. (2015) compared the VIRTIS spectra to laboratory spectra of carbonaceous chondrite meteorites of the CI, CM, and CR types and concluded that none of the typical features of these meteorite spectra are compatible with the spectra of the surface of 67P/Churyumov-Gerasimenko. Comparison of VIRTIS spectra of 67P/ Churyumov-Gerasimenko to the laboratory spectra of well-characterized extraterrestrial materials including the Wild 2 dust and the IDPs, a significant fraction of which are believed to be cometary, could aid in the interpretation of the 67P/Churyumov-Gerasimenko spectra. None of the Wild 2 particles examined by infrared spectroscopy exhibit an O-H feature, but this may be due to the high temperature reached during their capture in the aerogel collection medium. The O-H feature is also absent in all anhydrous IDPs. The hydrous IDPs exhibit varying strengths of both aliphatic C-H absorption features and the O-H absorption feature, but, as with the meteorites, the O-H feature occurs at a significantly shorter wavelength than the broad feature detected in 67P/Churyumov-Gerasimenko. Only one of the more than 50 IDPs analyzed by infrared spectroscopy has an infrared spectrum similar to that of 67P/Churyumov-Gerasimenko. This large, hydrous IDP, L2021 C10, has a broad absorption feature centered at the same position as the feature observed in 67P/Churyumov-Gerasimenko. In the case of L2021 C10 this feature is attributed to an O-H absorption feature in the position normally seen in hydrous minerals as well as a broad aromatic C-H feature, rarely detected in IDPs, and the aliphatic C-H feature seen in all IDPs examined thus far (Flynn et al., 2004). In the case of the VIRTIS spectrum of 67P/Churyumov-Gerasimenko the apparent shift of the broad O-H feature may actually result from the superposition of O-H and aromatic C-H features, both at their normal wavelengths. References: Capaccioni, F. et al. (2015) Science, 347 no. 6220, DOI: 10.1126/science.aaa0628. Flynn, G. J. et al. (2004) Advances in Space Research, 33, 57-66.

  8. Visible Human Project

    MedlinePlus

    ... used for teaching, modeling radiation absorption and therapy, equipment design, surgical simulation, and simulation of diagnostic procedures, ….” ... Project ® " by Michael J. Ackerman, Ph.D. Projects Based on the Visible Human Data Set Applications for ...

  9. Two-wavelength mid-IR diagnostic for temperature and n-dodecane concentration in an aerosol shock tube

    NASA Astrophysics Data System (ADS)

    Klingbeil, A. E.; Jeffries, J. B.; Davidson, D. F.; Hanson, R. K.

    2008-11-01

    A two-wavelength, mid-IR optical absorption diagnostic is developed for simultaneous temperature and n-dodecane vapor concentration measurements in an aerosol-laden shock tube. FTIR absorption spectra for the temperature range 323 to 773 K are used to select the two wavelengths (3409.0 and 3432.4 nm). Shock-heated mixtures of n-dodecane vapor in argon are then used to extend absorption cross section data at these wavelengths to 1322 K. The sensor is used to validate a model of the post-evaporation temperature and pressure of shock-heated fuel aerosol, which can ultimately be used for the study of the chemistry of low-vapor-pressure compounds and fuel blends. The signal-to-noise ratio of the temperature and concentration are ˜20 and ˜30, respectively, illustrating the sensitivity of this diagnostic. The good agreement between model and measurement provide confidence in the use of this aerosol shock tube to provide well-known thermodynamic conditions. At high temperatures, pseudo-first-order decomposition rates are extracted from time-resolved concentration measurements, and data from vapor and aerosol shocks are found to be in good agreement. Notably, the n-dodecane concentration measurements exhibit slower decomposition than predicted by models using two published reaction mechanisms, illustrating the need for further kinetic studies of this hydrocarbon. These results demonstrate the potential of multi-wavelength mid-IR laser sensors for hydrocarbon measurements in environments with time-varying temperature and concentration.

  10. Icy Moon Absorption Signatures: Probes of Saturnian Magnetospheric Dynamics and Moon Activity

    NASA Astrophysics Data System (ADS)

    Roussos, E.; Krupp, N.; Jones, G. H.; Paranicas, C.; Mitchell, D. G.; Krimigis, S. M.; Motschmann, U.; Dougherty, M. K.; Lagg, A.; Woch, J.

    2006-12-01

    After the first flybys at the outer planets by the Pioneer and Voyager probes, it became evident that energetic charged particle absorption features in the radiation belts are important tracers of magnetospheric dynamical features and parameters. Absorption signatures are especially important for characterizing the Saturnian magnetosphere. Due to the spin and magnetic axes' near-alignment, losses of particles to the icy moon surfaces and rings are higher compared to the losses at other planetary magnetospheres. The refilling rate of these absorption features (termed "micorsignatures") can be associated with particle diffusion. In addition, as these microsignatures drift with the properties of the pre-depletion electrons, they provide us direct information on the drift shell structure in the radiation belts and the factors that influence their shape. The multiple icy moon L-shell crossings by the Cassini spacecraft during the first 2 years of the mission provided us with almost 100 electron absorption events by eight different moons, at various longitudinal separations from each one and at various electron energies. Their analysis seems to give a consistent picture of the electron diffusion source and puts aside a lot of inconsistencies that resulted from relevant Pioneer and Voyager studies. The presence of non-axisymmetric particle drift shells even down to the orbit of Enceladus (3.98 Rs), also revealed through this analysis, suggests either large ring current disturbances or the action of global or localized electric fields. Finally, despite these absorption signatures being observed far from the originating moons, they can give us hints on the nature of the local interaction between each moon and the magnetospheric plasma. It is, nevertheless, beyond any doubt that energetic charged particle absorption signatures are a very powerful tool that can be used to effectively probe a series of dynamical processes in the Saturnian magnetosphere.

  11. Pioneer 11 observations of trapped particle absorption by the Jovian ring and the satellites 1979, J1, J2, and J3

    NASA Technical Reports Server (NTRS)

    Pyle, K. R.; Mckibben, R. B.; Simpson, J. A.

    1983-01-01

    Pioneer 11 low energy telescope observation of charged particles around the Jovian satellites Amalthea, 1979 J1, J2, and J3, and the Jupiter ring are examined in the light of Voyager optical data from the same region. Good agreement was found in the absorption features of 0.5-8.7 MeV protons, electrons with energies of 3.4 MeV or more, and medium-Z nuclei. The heavier nuclei are suggested to be oxygen and sulfur particles with energies exceeding 70 MeV/nucleon. The observed intensity features in the regularly spaced radiation bands are interpreted as ring and satellite absorption.

  12. Two-Photon Absorption in Pentacene Dimers: The Importance of the Spacer Using Upconversion as an Indirect Route to Singlet Fission.

    PubMed

    Garoni, Eleonora; Zirzlmeier, Johannes; Basel, Bettina S; Hetzer, Constantin; Kamada, Kenji; Guldi, Dirk M; Tykwinski, Rik R

    2017-10-11

    In this proof of concept study, we show that intramolecular singlet fission (iSF) can be initiated from a singlet excited state accessed by two-photon absorption, rather than through a traditional route of direct one-photon excitation (OPE). Thus, iSF in pentacene dimers 2 and 3 is enabled through NIR irradiation at 775 nm, a wavelength where neither dimer exhibits linear absorption of light. The adamantyl and meta-phenylene spacers 2 and 3, respectively, are designed to feature superimposable geometries, which establishes that the electronic coupling between the two pentacenes is the significant structural feature that dictates iSF efficiency.

  13. Characterization of micron-sized, optical coating defects by photothermal deflection microscopy

    NASA Astrophysics Data System (ADS)

    Abate, J. A.; Schmid, A. W.; Guardalben, M. G.; Smith, D. J.; Jacobs, S. D.

    1984-04-01

    Information about the localized absorbing defects in optical thin films is required for a better understanding of laser induced damage. Photothermal deflection microscopy offers a nondestructive optical diagnostic which yields spatially resolved absorption data on simple and multiple layer AR and HR dielectric coatings. The computer controlled apparatus used to generate absorption maps of dielectric thin films and an experiment in which a partial correlation between localized absorption sites and damage caused by nanosecond laser irradiation at 351 nm is established are described. An absolute calibration of absorption for our measurement technique is presented here. Micron sized absorbtive defects of Cu were introduced into our coatings to provide a means of calibration. Also presented here are some preliminary data on the modification of the absorption signatures measured by photothermal deflection as a function of the location of the defect within the coating layers.

  14. Universal ultrafast signatures of photoexcitations in conjugated polymers: excitons and charge-transfer polarons

    NASA Astrophysics Data System (ADS)

    McBranch, Duncan W.; Kraabel, Brett; Xu, Su; Wang, Hsing-Lin; Klimov, Victor I.

    1999-12-01

    Using subpicosecond transient absorption spectroscopy, we have investigated the primary photoexcitations in thin films and solution of several phenylene-based conjugated polymers and an oligomer. We identify two features in the transient absorption spectra and dynamics that are common to all of the materials which we have studied from this family. The first spectral feature is a photoinduced absorption (PA) band peaking near 1 eV which has intensity-dependent dynamics which match the stimulated emission dynamics exactly over two orders of magnitude in excitation density. This band is associated with singlet intrachain excitons. The second spectral feature (observed only in thin films and aggregated solutions) is a PA band peaking near 1.8 eV, which is longer-lived than the 1 eV exciton PA band, and which has dynamics that are independent (or weakly-dependent) on excitation density. This feature is attributed to charge separated (interchain) excitations. These excitations are generated through a bimolecular process. By comparing to samples in which charged excitations are created deliberately by doping with C6O, we assign these secondary species as bound polarons.

  15. Spectral Characteristics of Hayabusa 2 Near-Earth Asteroid Targets 162173 1999 JU3 and 2001 QC34

    NASA Astrophysics Data System (ADS)

    Vilas, Faith

    2008-04-01

    Reflectance spectra of C-type near-Earth asteroid 162173 1999 JU3 were acquired on UT 2007 July 11, September 10 and 11. An absorption feature centered near 0.7 μm, and associated with the presence of iron-bearing phyllosilicates, is seen in the 2007 July 11 spectrum. The 2007 September spectrum shows a shallow absorption feature centered near 0.6 μm. In contrast, the reflectance spectrum of 162173 1999 JU3 obtained during its discovery apparition has no absorption feature, suggesting that the asteroid's surface covers the conjunction of two different geological units. The variation in the presence and absence of these features in reflectance spectra of the surface material of C-type asteroids is observed among main-belt asteroids. As the target for the planned Japanese mission Hayabusa 2, 162173 1999 JU3 could represent a sample of aqueously altered early solar system material. An alternative target for Hayabusa 2, 2001 QC34, was observed spectrally for the first time. Its reflectance spectrum has characteristics of a Q-class or O-class asteroid.

  16. ASTER spectral analysis and lithologic mapping of the Khanneshin carbonatite volcano, Afghanistan

    USGS Publications Warehouse

    Mars, John C.; Rowan, Lawrence C.

    2011-01-01

    Advanced Spaceborne Thermal and Reflection Radiometer (ASTER) data of the early Quaternary Khanneshin carbonatite volcano located in southern Afghanistan were used to identify carbonate rocks within the volcano and to distinguish them from Neogene ferruginous polymict sandstone and argillite. The carbonatitic rocks are characterized by diagnostic CO3 absorption near 11.2 μm and 2.31–2.33 μm, whereas the sandstone, argillite, and adjacent alluvial deposits exhibit intense Si-O absorption near 8.7 μm caused mainly by quartz and Al-OH absorption near 2.20 μm due to muscovite and illite.Calcitic carbonatite was distinguished from ankeritic carbonatite in the short wave infrared (SWIR) region of the ASTER data due to a slight shift of the CO3 absorption feature toward 2.26 μm (ASTER band 7) in the ankeritic carbonatite spectra. Spectral assessment using ASTER SWIR data suggests that the area is covered by extensive carbonatite flows that contain calcite, ankerite, and muscovite, though some areas mapped as ankeritic carbonatite on a preexisting geologic map were not identified in the ASTER data. A contact aureole shown on the geologic map was defined using an ASTER false color composite image (R = 6, G = 3, B = 1) and a logical operator byte image. The contact aureole rocks exhibit Fe2+, Al-OH, and Fe, Mg-OH spectral absorption features at 1.65, 2.2, and 2.33 μm, respectively, which suggest that the contact aureole rocks contain muscovite, epidote, and chlorite. The contact aureole rocks were mapped using an Interactive Data Language (IDL) logical operator.A visible through short wave infrared (VNIR-SWIR) mineral and rock-type map based on matched filter, band ratio, and logical operator analysis illustrates: (1) laterally extensive calcitic carbonatite that covers most of the crater and areas northeast of the crater; (2) ankeritic carbonatite located southeast and north of the crater and some small deposits located within the crater; (3) agglomerate that primarily covers the inside rim of the crater and a small area west of the crater; (4) a crater rim that consists mostly of epidote-chlorite-muscovite–rich metamorphosed argillite and sandstone; and (5) iron (Fe3+) and muscovite-illite–rich rocks and iron-rich eolian sands surrounding the western part of the volcano. The thermal infrared (TIR) rock-type map illustrates laterally extensive carbonatitic and mafic rocks surrounded by quartz-rich eolian and fluvial reworked sediments. In addition, the combination of VNIR, SWIR, and TIR data complement one another in that the TIR data illustrate more laterally extensive rock types and the VNIR-SWIR data distinguish more specific varieties of rocks and mineral mixtures.

  17. Diagnostics of the ITER neutral beam test facility.

    PubMed

    Pasqualotto, R; Serianni, G; Sonato, P; Agostini, M; Brombin, M; Croci, G; Dalla Palma, M; De Muri, M; Gazza, E; Gorini, G; Pomaro, N; Rizzolo, A; Spolaore, M; Zaniol, B

    2012-02-01

    The ITER heating neutral beam (HNB) injector, based on negative ions accelerated at 1 MV, will be tested and optimized in the SPIDER source and MITICA full injector prototypes, using a set of diagnostics not available on the ITER HNB. The RF source, where the H(-)∕D(-) production is enhanced by cesium evaporation, will be monitored with thermocouples, electrostatic probes, optical emission spectroscopy, cavity ring down, and laser absorption spectroscopy. The beam is analyzed by cooling water calorimetry, a short pulse instrumented calorimeter, beam emission spectroscopy, visible tomography, and neutron imaging. Design of the diagnostic systems is presented.

  18. Effects of γ-ray irradiation on optical absorption and laser damage performance of KDP crystals containing arsenic impurities.

    PubMed

    Guo, D C; Jiang, X D; Huang, J; Wang, F R; Liu, H J; Xiang, X; Yang, G X; Zheng, W G; Zu, X T

    2014-11-17

    The effects of γ-irradiation on potassium dihydrogen phosphate crystals containing arsenic impurities are investigated with different optical diagnostics, including UV-VIS absorption spectroscopy, photo-thermal common-path interferometer and photoluminescence spectroscopy. The optical absorption spectra indicate that a new broad absorption band near 260 nm appears after γ-irradiation. It is found that the intensity of absorption band increases with the increasing irradiation dose and arsenic impurity concentration. The simulation of radiation defects show that this absorption is assigned to the formation of AsO₄⁴⁻ centers due to arsenic ions substituting for phosphorus ions. Laser-induced damage threshold test is conducted by using 355 nm nanosecond laser pulses. The correlations between arsenic impurity concentration and laser induced damage threshold are presented. The results indicate that the damage performance of the material decreases with the increasing arsenic impurity concentration. Possible mechanisms of the irradiation-induced defects formation under γ-irradiation of KDP crystals are discussed.

  19. A novel design for maskless direct laser writing nanolithography: Combination of diffractive optical element and nonlinear absorption inorganic resists

    NASA Astrophysics Data System (ADS)

    Zha, Yikun; Wei, Jingsong; Gan, Fuxi

    2013-09-01

    Maskless laser direct writing lithography has been applied in the fabrication of optical elements and electric-optical devices. With the development of technology, the feature size of the elements and devices is required to reduce down to nanoscale. Increasing the numerical aperture of converging lens and shortening the laser wavelength are good methods to obtain the small spot and reduce the feature size to nanoscale, while this will cause the reduction of the depth of focus. The reduction of depth of focus will lead to some difficulties in the focusing and tracking servo controlling during the high speed laser direct writing lithography. In this work, the combination of the diffractive optical elements and the nonlinear absorption inorganic resist thin films cannot only extend the depth of focus, but also reduce the feature size of the lithographic marks down to nanoscale. By using the five-zone annular phase-only binary pupil filter as the diffractive optical elements and AgInSbTe as the nonlinear absorption inorganic resist thin film, the depth of focus cannot only extend to 7.39 times that of the focused spot, but also reduce the lithographic feature size down to 54.6 nm. The ill-effect of sidelobe on the lithography is also eliminated by the nonlinear reverse saturable absorption and the phase change threshold lithographic characteristics.

  20. Predicting diagnostic error in Radiology via eye-tracking and image analytics: Application in mammography

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Voisin, Sophie; Pinto, Frank M; Morin-Ducote, Garnetta

    2013-01-01

    Purpose: The primary aim of the present study was to test the feasibility of predicting diagnostic errors in mammography by merging radiologists gaze behavior and image characteristics. A secondary aim was to investigate group-based and personalized predictive models for radiologists of variable experience levels. Methods: The study was performed for the clinical task of assessing the likelihood of malignancy of mammographic masses. Eye-tracking data and diagnostic decisions for 40 cases were acquired from 4 Radiology residents and 2 breast imaging experts as part of an IRB-approved pilot study. Gaze behavior features were extracted from the eye-tracking data. Computer-generated and BIRADsmore » images features were extracted from the images. Finally, machine learning algorithms were used to merge gaze and image features for predicting human error. Feature selection was thoroughly explored to determine the relative contribution of the various features. Group-based and personalized user modeling was also investigated. Results: Diagnostic error can be predicted reliably by merging gaze behavior characteristics from the radiologist and textural characteristics from the image under review. Leveraging data collected from multiple readers produced a reasonable group model (AUC=0.79). Personalized user modeling was far more accurate for the more experienced readers (average AUC of 0.837 0.029) than for the less experienced ones (average AUC of 0.667 0.099). The best performing group-based and personalized predictive models involved combinations of both gaze and image features. Conclusions: Diagnostic errors in mammography can be predicted reliably by leveraging the radiologists gaze behavior and image content.« less

  1. The influence of local electric fields on photoinduced absorption in dye-sensitized solar cells.

    PubMed

    Cappel, Ute B; Feldt, Sandra M; Schöneboom, Jan; Hagfeldt, Anders; Boschloo, Gerrit

    2010-07-07

    The dye-sensitized solar cell (DSC) challenges conventional photovoltaics with its potential for low-cost production and its flexibility in terms of color and design. Transient absorption spectroscopy is widely used to unravel the working mechanism of DSCs. A surprising, unexplained feature observed in these studies is an apparent bleach of the ground-state absorption of the dye, under conditions where the dye is in the ground state. Here, we demonstrate that this feature can be attributed to a change of the local electric field affecting the absorption spectrum of the dye, an effect related to the Stark effect first reported in 1913. We present a method for measuring the effect of an externally applied electric field on the absorption of dye monolayers adsorbed on flat TiO(2) substrates. The measured signal has the shape of the first derivative of the absorption spectra of the dyes and reverses sign along with the reversion of the direction of the change in dipole moment upon excitation relative to the TiO(2) surface. A very similar signal is observed in photoinduced absorption spectra of dye-sensitized TiO(2) electrodes under solar cell conditions, demonstrating that the electric field across the dye molecules changes upon illumination. This result has important implications for the analysis of transient absorption spectra of DSCs and other molecular optoelectronic devices and challenges the interpretation of many previously published results.

  2. VUV absorption spectroscopy measurements of the role of fast neutral atoms in a high-power gap breakdown

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Filuk, A. B.; Bailey, J. E.; Cuneo, M. E.

    The maximum power achieved in a wide variety of high-power devices, including electron and ion diodes, z pinches, and microwave generators, is presently limited by anode-cathode gap breakdown. A frequently discussed hypothesis for this effect is ionization of fast neutral atoms injected throughout the anode-cathode gap during the power pulse. We describe a newly developed diagnostic tool that provides a direct test of this hypothesis. Time-resolved vacuum-ultraviolet absorption spectroscopy is used to directly probe fast neutral atoms with 1-mm spatial resolution in the 10-mm anode-cathode gap of the SABRE 5 MV, 1 TW applied-B ion diode. Absorption spectra collected duringmore » Ar RF glow discharges and with CO{sub 2} gas fills confirm the reliability of the diagnostic technique. Throughout the 50--100 ns ion diode pulses no measurable neutral absorption was seen, setting upper limits of (0.12--1.5)x10{sup 14}cm{sup -3} for ground-state fast neutral atom densities of H, C, N, O, and F. The absence of molecular absorption bands also sets upper limits of (0.16--1.2)x10{sup 15}cm{sup -3} for common simple molecules. These limits are low enough to rule out ionization of fast neutral atoms as a breakdown mechanism. Breakdown due to ionization of molecules is also found to be unlikely. This technique can now be applied to quantify the role of neutral atoms in other high-power devices.« less

  3. Understanding the features in the ultrafast transient absorption spectra of CdSe quantum dots

    NASA Astrophysics Data System (ADS)

    Zhang, Cheng; Do, Thanh Nhut; Ong, Xuanwei; Chan, Yinthai; Tan, Howe-Siang

    2016-12-01

    We describe a model to explain the features of the ultrafast transient absorption (TA) spectra of CdSe core type quantum dots (QDs). The measured TA spectrum consists of contributions by the ground state bleach (GSB), stimulated emission (SE) and excited state absorption (ESA) processes associated with the three lowest energy transition of the QDs. We model the shapes of the GSB, SE and ESA spectral components after fits to the linear absorption. The spectral positions of the ESA components take into account the biexcitonic binding energy. In order to obtain the correct weightage of the GSB, SE and ESA components to the TA spectrum, we enumerate the set of coherence transfer pathways associated with these processes. From our fits of the experimental TA spectra of 65 Å diameter QDs, biexcitonic binding energies for the three lowest energy transitions are obtained.

  4. First Spectroscopic Identification of Massive Young Stellar Objects in the Galactic Center

    NASA Technical Reports Server (NTRS)

    An, Deokkeun; Ramirez, V.; Sellgren, Kris; Arendt, Richard G.; Boogert, A. C.; Schultheis, Mathias; Stolovy, Susan R.; Cotera, Angela S.; Robitaille, Thomas P.; Smith, Howard A.

    2009-01-01

    We report the detection of several molecular gas-phase and ice absorption features in three photometrically-selected young stellar object (YSO) candidates in the central 280 pc of the Milky Way. Our spectra, obtained with the Infrared Spectrograph (IRS) onboard the Spitzer Space Telescope, reveal gas-phase absorption from CO2 (15.0 microns), C2H2 (13.7 microns) and HCN (14.0 microns). We attribute this absorption to warm, dense gas in massive YSOs. We also detect strong and broad 15 microns CO2 ice absorption features, with a remarkable double-peaked structure. The prominent long-wavelength peak is due to CH3OH-rich ice grains, and is similar to those found in other known massive YSOs. Our IRS observa.tions demonstra.te the youth of these objects, and provide the first spectroscopic identification of massive YSOs in the Galactic Center.

  5. Absorption by Spinning Dust: A Contaminant for High-redshift 21 cm Observations

    NASA Astrophysics Data System (ADS)

    Draine, B. T.; Miralda-Escudé, Jordi

    2018-05-01

    Spinning dust grains in front of the bright Galactic synchrotron background can produce a weak absorption signal that could affect measurements of high-redshift 21 cm absorption. At frequencies near 80 MHz where the Experiment to Detect the Global EoR Signature (EDGES) has reported 21 cm absorption at z≈ 17, absorption could be produced by interstellar nanoparticles with radii a≈ 50 \\mathringA in the cold interstellar medium (ISM), with rotational temperature T ≈ 50 K. Atmospheric aerosols could contribute additional absorption. The strength of the absorption depends on the abundance of such grains and on their dipole moments, which are uncertain. The breadth of the absorption spectrum of spinning dust limits its possible impact on measurement of a relatively narrow 21 cm absorption feature.

  6. Towards intelligent diagnostic system employing integration of mathematical and engineering model

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Isa, Nor Ashidi Mat

    The development of medical diagnostic system has been one of the main research fields during years. The goal of the medical diagnostic system is to place a nosological system that could ease the diagnostic evaluation normally performed by scientists and doctors. Efficient diagnostic evaluation is essentials and requires broad knowledge in order to improve conventional diagnostic system. Several approaches on developing the medical diagnostic system have been designed and tested since the earliest 60s. Attempts on improving their performance have been made which utilizes the fields of artificial intelligence, statistical analyses, mathematical model and engineering theories. With the availability ofmore » the microcomputer and software development as well as the promising aforementioned fields, medical diagnostic prototypes could be developed. In general, the medical diagnostic system consists of several stages, namely the 1) data acquisition, 2) feature extraction, 3) feature selection, and 4) classifications stages. Data acquisition stage plays an important role in converting the inputs measured from the real world physical conditions to the digital numeric values that can be manipulated by the computer system. One of the common medical inputs could be medical microscopic images, radiographic images, magnetic resonance image (MRI) as well as medical signals such as electrocardiogram (ECG) and electroencephalogram (EEG). Normally, the scientist or doctors have to deal with myriad of data and redundant to be processed. In order to reduce the complexity of the diagnosis process, only the significant features of the raw data such as peak value of the ECG signal or size of lesion in the mammogram images will be extracted and considered in the subsequent stages. Mathematical models and statistical analyses will be performed to select the most significant features to be classified. The statistical analyses such as principal component analysis and discriminant analysis as well as mathematical model of clustering technique have been widely used in developing the medical diagnostic systems. The selected features will be classified using mathematical models that embedded engineering theory such as artificial intelligence, support vector machine, neural network and fuzzy-neuro system. These classifiers will provide the diagnostic results without human intervention. Among many publishable researches, several prototypes have been developed namely NeuralPap, Neural Mammo, and Cervix Kit. The former system (NeuralPap) is an automatic intelligent diagnostic system for classifying and distinguishing between the normal and cervical cancerous cells. Meanwhile, the Cervix Kit is a portable Field-programmable gate array (FPGA)-based cervical diagnostic kit that could automatically diagnose the cancerous cell based on the images obtained during sampling test. Besides the cervical diagnostic system, the Neural Mammo system is developed to specifically aid the diagnosis of breast cancer using a fine needle aspiration image.« less

  7. Towards intelligent diagnostic system employing integration of mathematical and engineering model

    NASA Astrophysics Data System (ADS)

    Isa, Nor Ashidi Mat

    2015-05-01

    The development of medical diagnostic system has been one of the main research fields during years. The goal of the medical diagnostic system is to place a nosological system that could ease the diagnostic evaluation normally performed by scientists and doctors. Efficient diagnostic evaluation is essentials and requires broad knowledge in order to improve conventional diagnostic system. Several approaches on developing the medical diagnostic system have been designed and tested since the earliest 60s. Attempts on improving their performance have been made which utilizes the fields of artificial intelligence, statistical analyses, mathematical model and engineering theories. With the availability of the microcomputer and software development as well as the promising aforementioned fields, medical diagnostic prototypes could be developed. In general, the medical diagnostic system consists of several stages, namely the 1) data acquisition, 2) feature extraction, 3) feature selection, and 4) classifications stages. Data acquisition stage plays an important role in converting the inputs measured from the real world physical conditions to the digital numeric values that can be manipulated by the computer system. One of the common medical inputs could be medical microscopic images, radiographic images, magnetic resonance image (MRI) as well as medical signals such as electrocardiogram (ECG) and electroencephalogram (EEG). Normally, the scientist or doctors have to deal with myriad of data and redundant to be processed. In order to reduce the complexity of the diagnosis process, only the significant features of the raw data such as peak value of the ECG signal or size of lesion in the mammogram images will be extracted and considered in the subsequent stages. Mathematical models and statistical analyses will be performed to select the most significant features to be classified. The statistical analyses such as principal component analysis and discriminant analysis as well as mathematical model of clustering technique have been widely used in developing the medical diagnostic systems. The selected features will be classified using mathematical models that embedded engineering theory such as artificial intelligence, support vector machine, neural network and fuzzy-neuro system. These classifiers will provide the diagnostic results without human intervention. Among many publishable researches, several prototypes have been developed namely NeuralPap, Neural Mammo, and Cervix Kit. The former system (NeuralPap) is an automatic intelligent diagnostic system for classifying and distinguishing between the normal and cervical cancerous cells. Meanwhile, the Cervix Kit is a portable Field-programmable gate array (FPGA)-based cervical diagnostic kit that could automatically diagnose the cancerous cell based on the images obtained during sampling test. Besides the cervical diagnostic system, the Neural Mammo system is developed to specifically aid the diagnosis of breast cancer using a fine needle aspiration image.

  8. Are Hyperion and Phoebe Linked to Iapetus?

    NASA Technical Reports Server (NTRS)

    Jarvis, Kandy S.; Vilas, Faith; Larson, Stephen M.; Gaffey, Michael J.

    1999-01-01

    Narrowband reflectance spectra of the Saturnian satellites S VII Hyperion and S IX Phoebe were obtained across the 0.4 - 0.8 micron spectral region. The spectrum of Phoebe is similar to the spectrum of a C-class asteroid, with an absorption feature centered near 0.43 micron superimposed on the UV/blue intervalence charge transfer transition present in the spectrum. The spectrum of Hyperion shows the strong spectral slope apparent in spectra of many outer Solar System materials and attributed to organics. We use a linear mixing model to separate the reflectance spectrum of the dark material on Hyperion from the icy material. A distinct absorption feature centered at 0.67 micron is present. A slight inflection near 0.4 - 0.6 micron and change in slope near 0.73 micron suggesting the lower wavelength edge of an absorption are also present. These absorptions are very similar to those identified in the spectrum of the dark material on the surface of Iapetus, suggesting that the dark material on these two satellites is compositionally similar and has a similar origin. These absorption features are attributed to the (6)A(sub 1) yields (4)T(sub 2)(G) and (6)A(sub 1) yields (4)T(sub 1)(G) ferric charge transfer transitions in iron alteration minerals such as goethite and hematite that are products of the aqueous alteration of anhydrous silicates.

  9. Could G Asteroids be the Parent Bodies of the CM Chondrites?

    NASA Astrophysics Data System (ADS)

    Burbine, T. H.; Binzel, R. P.

    1995-09-01

    Since almost all meteorites are believed to be derived from asteroidal source bodies, the comparison of asteroid and meteorite spectra should allow for possible meteorite parent bodies to be identified. However only two asteroids with unique spectral characteristics, 4 Vesta with the basaltic achondrites [1] and near-Earth asteroid 3103 Eger with the aubrites [2], have been convincingly linked with any meteorite type. Farinella et al. [3] has done a study of 2355 numbered main-belt asteroids to determine which asteroids have the highest probability of having their fragments injected into the 3:1 mean motion and the nu6 secular resonance regions. Interestingly, asteroids with the third (19 Fortuna), tenth (1 Ceres) and eleventh (13 Egeria) highest theoretical total fragment delivery efficiencies are G-asteroids, a moderately rare type of asteroid with approximately ten known members. (Vesta has the fifth highest theoretical total fragment delivery efficiency.) G-asteroids tend to have the strongest ultraviolet, 0.7 micrometers and 3 micrometers absorption features of all C-type (B, C, F and G) asteroids, appearing to indicate that G-asteroids are at the upper range of the aqueous alteration sequence in the asteroid population. (The 0.7 micrometers feature is apparently due to iron oxides in hydrated silicates and the 3 micrometers feature is apparently due to hydrated minerals.) Meteorites that have reflectance spectra with a 3 micrometers feature of comparable intensity to those of the G-asteroids are the CI, CM and CR chondrites. However, G-asteroids (like all C-types) have ultraviolet absorption features that are weaker than previously measured meteorite spectra. Comparisons of reflectance spectra between Ceres and meteorite samples appear to indicate that Ceres is compositionally different from almost all known carbonaceous chondrites. Both Fortuna and Egeria have an absorption feature centered around 0.7 micrometers [4] that is similar in structure and strength to those found in many CM chondrites. The visible and near-infrared spectrum of Fortuna [5] matches very well the spectra of CM chondrites Murchison (bulk powder) [6] and LEW90500 (particle sizes less than 100 micrometers) [7]. However, the ultraviolet absorption feature is still weaker in Fortuna's spectrum. A spectrum of a bulk powder of LEW90500 does have an ultraviolet feature that matches Fortuna's feature, but this spectrum is substantially bluer than Fortuna in the near-infrared. Egeria's ultraviolet absorption feature also matches very well the ultraviolet feature in LEW90500Us (bulk powder) spectrum, but this spectrum is slightly redder than Egeria [5] in the near-infrared. The question is how unique is any postulated linkage between the CM chondrites and the G-asteroids. The problem is that approximately two-thirds of all C-type asteroids have 3 micrometers absorption features [8] and approximately three-fourths have 0.7 micrometers absorption features [4]. However of all observed C-type asteroids, Fortuna and Egeria appear to be two of the best spectral matches for the CM chondrites. Coupled with the high probability that these two asteroids are injecting large numbers of fragments into meteorite-supplying resonances, G-asteroids Fortuna and Egeria appear to be possible CM chondrite parent bodies. Acknowledgments: This research is supported by NASA Grant Number NAGW-2049. References: [1] Binzel R. P. and Xu S. (1993) Science, 260, 186-191. [2] Gaffey M. J. et al. (1992) Icarus, 100, 95-109. [3] Farinella P. et al. (1993) Icarus, 101, 174-187. [4] Sawyer S. R. (1991) Ph.D. thesis, Univ. of Texas, Austin. [5] Bell J. F. et al. (1988) LPS XIX, 57-58. [6] Gaffey M. J. (1976) JGR, 81, 905-920. [7] Hiroi T. et al. (1993) Science, 261, 1016-1018. [8] Jones T. D. et al. (1990) Icarus, 88,172-192.

  10. Lung nodule malignancy classification using only radiologist-quantified image features as inputs to statistical learning algorithms: probing the Lung Image Database Consortium dataset with two statistical learning methods

    PubMed Central

    Hancock, Matthew C.; Magnan, Jerry F.

    2016-01-01

    Abstract. In the assessment of nodules in CT scans of the lungs, a number of image-derived features are diagnostically relevant. Currently, many of these features are defined only qualitatively, so they are difficult to quantify from first principles. Nevertheless, these features (through their qualitative definitions and interpretations thereof) are often quantified via a variety of mathematical methods for the purpose of computer-aided diagnosis (CAD). To determine the potential usefulness of quantified diagnostic image features as inputs to a CAD system, we investigate the predictive capability of statistical learning methods for classifying nodule malignancy. We utilize the Lung Image Database Consortium dataset and only employ the radiologist-assigned diagnostic feature values for the lung nodules therein, as well as our derived estimates of the diameter and volume of the nodules from the radiologists’ annotations. We calculate theoretical upper bounds on the classification accuracy that are achievable by an ideal classifier that only uses the radiologist-assigned feature values, and we obtain an accuracy of 85.74 (±1.14)%, which is, on average, 4.43% below the theoretical maximum of 90.17%. The corresponding area-under-the-curve (AUC) score is 0.932 (±0.012), which increases to 0.949 (±0.007) when diameter and volume features are included and has an accuracy of 88.08 (±1.11)%. Our results are comparable to those in the literature that use algorithmically derived image-based features, which supports our hypothesis that lung nodules can be classified as malignant or benign using only quantified, diagnostic image features, and indicates the competitiveness of this approach. We also analyze how the classification accuracy depends on specific features and feature subsets, and we rank the features according to their predictive power, statistically demonstrating the top four to be spiculation, lobulation, subtlety, and calcification. PMID:27990453

  11. Lung nodule malignancy classification using only radiologist-quantified image features as inputs to statistical learning algorithms: probing the Lung Image Database Consortium dataset with two statistical learning methods.

    PubMed

    Hancock, Matthew C; Magnan, Jerry F

    2016-10-01

    In the assessment of nodules in CT scans of the lungs, a number of image-derived features are diagnostically relevant. Currently, many of these features are defined only qualitatively, so they are difficult to quantify from first principles. Nevertheless, these features (through their qualitative definitions and interpretations thereof) are often quantified via a variety of mathematical methods for the purpose of computer-aided diagnosis (CAD). To determine the potential usefulness of quantified diagnostic image features as inputs to a CAD system, we investigate the predictive capability of statistical learning methods for classifying nodule malignancy. We utilize the Lung Image Database Consortium dataset and only employ the radiologist-assigned diagnostic feature values for the lung nodules therein, as well as our derived estimates of the diameter and volume of the nodules from the radiologists' annotations. We calculate theoretical upper bounds on the classification accuracy that are achievable by an ideal classifier that only uses the radiologist-assigned feature values, and we obtain an accuracy of 85.74 [Formula: see text], which is, on average, 4.43% below the theoretical maximum of 90.17%. The corresponding area-under-the-curve (AUC) score is 0.932 ([Formula: see text]), which increases to 0.949 ([Formula: see text]) when diameter and volume features are included and has an accuracy of 88.08 [Formula: see text]. Our results are comparable to those in the literature that use algorithmically derived image-based features, which supports our hypothesis that lung nodules can be classified as malignant or benign using only quantified, diagnostic image features, and indicates the competitiveness of this approach. We also analyze how the classification accuracy depends on specific features and feature subsets, and we rank the features according to their predictive power, statistically demonstrating the top four to be spiculation, lobulation, subtlety, and calcification.

  12. VNIR spectral features observed by the Mars Exploration Rover Opportunity in hematite-bearing materials at Meridiani Planum

    NASA Astrophysics Data System (ADS)

    Farrand, W. H.; Bell, J. F.; Morris, R. V.; Joliff, B. L.; Squyres, S. W.; Souza, P. A.

    2004-12-01

    The Mars Exploration Rover Opportunity was sent to Meridiani Planum based largely on MGS TES spectroscopic evidence of a large surface exposure of coarse grained gray hematite. The presence of hematite at Meridiani Planum has been confirmed through thermal infrared spectroscopy by the rover's Mini-TES instrument and by in-situ measurements by its Moessbauer (MB) spectrometer. Several types of hematite, as expressed by differences in MB spectral parameters, have been associated with various rocks and soils examined in Eagle crater and on the surrounding plains. The host materials include the small spherules (informally known as "blueberries") littering the floor of Eagle crater and the plains of Meridiani, the outcrop rock itself, specific types of soils, and two measurements on unique rocks in the Shoemaker's Patio area of Eagle crater. At the visible to near infrared (VNIR) wavelengths covered by the rover's multispectral Panoramic camera (Pancam), gray hematite is spectrally neutral. However, multispectral observations by Pancam of some of these hematite-bearing materials show discernable spectral features. Specifically, portions of the outcrop visible in the walls of Eagle crater display a strong 535 nm absorption feature. This feature resembles a similar feature in laboratory spectra of red hematite, but the characteristic 860 nm absorption of red hematite is either absent or is instead replaced by a longer wavelength absorption centered on Pancam's 900 nm channel. The blueberries display a deep and broad absorption centered on 900 nm and as well as an increase in reflectance in the 1009 nm band. The shape of the absorption feature in the blueberries is consistent with that seen in red hematite, but again the band minimum is displaced to a longer wavelength than would be expected for red hematite. The blueberries also lack the prominent absorption at the shortest wavelengths that would be expected of red hematite. The unique hematite-bearing (or coated) rocks at Shoemaker's Patio lack the very strong 535 nm band depth of other portions of the outcrop but still have a stronger 535 nm feature than most of the outcrop. Interestingly, VNIR spectra more consistent with that expected for red hematite have been found in cuttings released by grinding into outcrop by the rover's Rock Abrasion Tool. The cause of the observed spectral features in the portions of outcrop with strong 535 nm band depths and of the reddish rocks in the Shoemaker's Patio area is believed to be attributable either to red hematite mixed with other Fe3+ - bearing phases (such as jarosite and/or schwertmannite) or, at the longer wavelengths, with Fe2+ - bearing phases (such as pyroxenes). Determination of the nature of these iron-bearing materials will further elucidate the geologic, aqueous and diagenetic history of the rocks at Meridiani Planum.

  13. High-temperature measurements of methane and acetylene using quantum cascade laser absorption near 8 μm

    NASA Astrophysics Data System (ADS)

    Sajid, M. B.; Javed, T.; Farooq, A.

    2015-04-01

    The mid-infrared wavelength region near 8 μm contains absorption bands of several molecules such as water vapor, hydrogen peroxide, nitrous oxide, methane and acetylene. A new laser absorption sensor based on the ν4 band of methane and the ν4+ν5 band of acetylene is reported for interference-free, time-resolved measurements under combustion-relevant conditions. A detailed line-selection procedure was used to identify optimum transitions. Methane and acetylene were measured at the line centers of Q12 (1303.5 cm-1) and P23 (1275.5 cm-1) transitions, respectively. High-temperature absorption cross sections of methane and acetylene were measured at peaks (on-line) and valleys (off-line) of the selected absorption transitions. The differential absorption strategy was employed to eliminate interference absorption from large hydrocarbons. Experiments were performed behind reflected shock waves over a temperature range of 1200-2200 K, between pressures of 1-4 atm. The diagnostics were then applied to measure the respective species time-history profiles during the shock-heated pyrolysis of n-pentane.

  14. The Galah Survey: Classification and Diagnostics with t-SNE Reduction of Spectral Information

    NASA Astrophysics Data System (ADS)

    Traven, G.; Matijevič, G.; Zwitter, T.; Žerjal, M.; Kos, J.; Asplund, M.; Bland-Hawthorn, J.; Casey, A. R.; De Silva, G.; Freeman, K.; Lin, J.; Martell, S. L.; Schlesinger, K. J.; Sharma, S.; Simpson, J. D.; Zucker, D. B.; Anguiano, B.; Da Costa, G.; Duong, L.; Horner, J.; Hyde, E. A.; Kafle, P. R.; Munari, U.; Nataf, D.; Navin, C. A.; Reid, W.; Ting, Y.-S.

    2017-02-01

    Galah is an ongoing high-resolution spectroscopic survey with the goal of disentangling the formation history of the Milky Way using the fossil remnants of disrupted star formation sites that are now dispersed around the Galaxy. It is targeting a randomly selected magnitude-limited (V ≤ 14) sample of stars, with the goal of observing one million objects. To date, 300,000 spectra have been obtained. Not all of them are correctly processed by parameter estimation pipelines, and we need to know about them. We present a semi-automated classification scheme that identifies different types of peculiar spectral morphologies in an effort to discover and flag potentially problematic spectra and thus help to preserve the integrity of the survey results. To this end, we employ the recently developed dimensionality reduction technique t-SNE (t-distributed stochastic neighbor embedding), which enables us to represent the complex spectral morphology in a two-dimensional projection map while still preserving the properties of the local neighborhoods of spectra. We find that the majority (178,483) of the 209,533 Galah spectra considered in this study represents normal single stars, whereas 31,050 peculiar and problematic spectra with very diverse spectral features pertaining to 28,579 stars are distributed into 10 classification categories: hot stars, cool metal-poor giants, molecular absorption bands, binary stars, Hα/Hβ emission, Hα/Hβ emission superimposed on absorption, Hα/Hβ P-Cygni, Hα/Hβ inverted P-Cygni, lithium absorption, and problematic. Classified spectra with supplementary information are presented in the catalog, indicating candidates for follow-up observations and population studies of the short-lived phases of stellar evolution.

  15. The Galah Survey: Classification and Diagnostics with t-SNE Reduction of Spectral Information

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Traven, G.; Zwitter, T.; Žerjal, M.

    Galah is an ongoing high-resolution spectroscopic survey with the goal of disentangling the formation history of the Milky Way using the fossil remnants of disrupted star formation sites that are now dispersed around the Galaxy. It is targeting a randomly selected magnitude-limited ( V ≤ 14) sample of stars, with the goal of observing one million objects. To date, 300,000 spectra have been obtained. Not all of them are correctly processed by parameter estimation pipelines, and we need to know about them. We present a semi-automated classification scheme that identifies different types of peculiar spectral morphologies in an effort tomore » discover and flag potentially problematic spectra and thus help to preserve the integrity of the survey results. To this end, we employ the recently developed dimensionality reduction technique t-SNE ( t -distributed stochastic neighbor embedding), which enables us to represent the complex spectral morphology in a two-dimensional projection map while still preserving the properties of the local neighborhoods of spectra. We find that the majority (178,483) of the 209,533 Galah spectra considered in this study represents normal single stars, whereas 31,050 peculiar and problematic spectra with very diverse spectral features pertaining to 28,579 stars are distributed into 10 classification categories: hot stars, cool metal-poor giants, molecular absorption bands, binary stars, H α /H β emission, H α /H β emission superimposed on absorption, H α /H β P-Cygni, H α /H β inverted P-Cygni, lithium absorption, and problematic. Classified spectra with supplementary information are presented in the catalog, indicating candidates for follow-up observations and population studies of the short-lived phases of stellar evolution.« less

  16. Fluorescence and absorption spectroscopy for warm dense matter studies and ICF plasma diagnostics

    NASA Astrophysics Data System (ADS)

    Hansen, Stephanie

    2017-10-01

    The burning core of an inertial confinement fusion (ICF) plasma at stagnation is surrounded by a shell of warm, dense matter whose properties are difficult both to model (due to a complex interplay of thermal, degeneracy, and strong coupling effects) and to diagnose (due to low emissivity and high opacity). We demonstrate a promising technique to study the warm dense shells of ICF plasmas based on the fluorescence emission of dopants or impurities in the shell material. This emission, which is driven by x-rays produced in the hot core, exhibits signature changes in response to compression and heating. High-resolution measurements of absorption and fluorescence features can refine our understanding of the electronic structure of material under high compression, improve our models of density-driven phenomena such as ionization potential depression and plasma polarization shifts, and help diagnose shell density, temperature, mass distribution, and residual motion in ICF plasmas at stagnation. Sandia National Laboratories is a multi-mission laboratory managed and operated by National Technology and Engineering Solutions of Sandia, LLC., a wholly owned subsidiary of Honeywell International, Inc., for the U.S. Department of Energy's National Nuclear Security Administration under contract DE-NA-0003525. This work was supported by the U.S. Department of Energy, Office of Science Early Career Research Program, Office of Fusion Energy Sciences under FWP-14-017426.

  17. Correction of Near-infrared High-resolution Spectra for Telluric Absorption at 0.90–1.35 μm

    NASA Astrophysics Data System (ADS)

    Sameshima, Hiroaki; Matsunaga, Noriyuki; Kobayashi, Naoto; Kawakita, Hideyo; Hamano, Satoshi; Ikeda, Yuji; Kondo, Sohei; Fukue, Kei; Taniguchi, Daisuke; Mizumoto, Misaki; Arai, Akira; Otsubo, Shogo; Takenaka, Keiichi; Watase, Ayaka; Asano, Akira; Yasui, Chikako; Izumi, Natsuko; Yoshikawa, Tomohiro

    2018-07-01

    We report a method of correcting a near-infrared (0.90–1.35 μm) high-resolution (λ/Δλ ∼ 28,000) spectrum for telluric absorption using the corresponding spectrum of a telluric standard star. The proposed method uses an A0 V star or its analog as a standard star from which on the order of 100 intrinsic stellar lines are carefully removed with the help of a reference synthetic telluric spectrum. We find that this method can also be applied to feature-rich objects having spectra with heavily blended intrinsic stellar and telluric lines and present an application to a G-type giant using this approach. We also develop a new diagnostic method for evaluating the accuracy of telluric correction and use it to demonstrate that our method achieves an accuracy better than 2% for spectral parts for which the atmospheric transmittance is as low as ∼20% if telluric standard stars are observed under the following conditions: (1) the difference in airmass between the target and the standard is ≲ 0.05; and (2) that in time is less than 1 hr. In particular, the time variability of water vapor has a large impact on the accuracy of telluric correction and minimizing the difference in time from that of the telluric standard star is important especially in near-infrared high-resolution spectroscopic observation.

  18. Combining IRIS/Hinode Observations and Modeling: a Pathfinder for Coronal Heating

    NASA Astrophysics Data System (ADS)

    Antolin, P.; Okamoto, J.; De Pontieu, B.

    2015-12-01

    The combination of imaging and spectroscopic instruments with multiple temperature diagnostics at high spatial, temporal and spectral resolution can allow to recover the 3D plasma flow and thermodynamic evolution associated with specific coronal heating mechanisms. Although very hard considering the complexity of the solar atmosphere, this approach is becoming possible now through combination of instruments such as IRIS and Hinode, and with proper guiding from advanced numerical simulations and forward modeling. In this talk I will review recent examples of this approach, focusing on a particular, recently published, case study, that serves as a pathfinder in the search for the dominant coronal heating mechanism. In this case, resonant absorption, a long hypothesised wave-related energy conversion mechanism is spotted in action for the first time, and is characterised by a peculiar 3D motion of the plasma. With the help of 3D MHD numerical simulations and forward modeling the observational signatures of resonant absorption are characterised, matching very well the observational results. The process through which this mechanism can lead to observed significant heating in the solar corona is further identified: the resonant flow becomes turbulent following dynamic instabilities and heats the plasma. I will show how this resonance + instability process is expected in different scenarios of the solar atmosphere (the corona, prominences and spicules) and can potentially explain several observed features that remain so far unexplained.

  19. The lick-index calibration of the Gemini multi-object spectrographs

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Puzia, Thomas H.; Miller, Bryan W.; Trancho, Gelys

    2013-06-01

    We present the calibration of the spectroscopic Lick/IDS standard line-index system for measurements obtained with the Gemini Multi-Object Spectrographs known as GMOS-North and GMOS-South. We provide linear correction functions for each of the 25 standard Lick line indices for the B600 grism and two instrumental setups, one with 0.''5 slit width and 1 × 1 CCD pixel binning (corresponding to ∼2.5 Å spectral resolution) and the other with 0.''75 slit width and 2 × 2 binning (∼4 Å). We find small and well-defined correction terms for the set of Balmer indices Hβ, Hγ {sub A}, and Hδ {sub A} alongmore » with the metallicity sensitive indices Fe5015, Fe5270, Fe5335, Fe5406, Mg{sub 2}, and Mgb that are widely used for stellar population diagnostics of distant stellar systems. We find other indices that sample molecular absorption bands, such as TiO{sub 1} and TiO{sub 2}, with very wide wavelength coverage or indices that sample very weak molecular and atomic absorption features, such as Mg{sub 1}, as well as indices with particularly narrow passband definitions, such as Fe4384, Ca4455, Fe4531, Ca4227, and Fe5782, which are less robustly calibrated. These indices should be used with caution.« less

  20. The application of feature selection to the development of Gaussian process models for percutaneous absorption.

    PubMed

    Lam, Lun Tak; Sun, Yi; Davey, Neil; Adams, Rod; Prapopoulou, Maria; Brown, Marc B; Moss, Gary P

    2010-06-01

    The aim was to employ Gaussian processes to assess mathematically the nature of a skin permeability dataset and to employ these methods, particularly feature selection, to determine the key physicochemical descriptors which exert the most significant influence on percutaneous absorption, and to compare such models with established existing models. Gaussian processes, including automatic relevance detection (GPRARD) methods, were employed to develop models of percutaneous absorption that identified key physicochemical descriptors of percutaneous absorption. Using MatLab software, the statistical performance of these models was compared with single linear networks (SLN) and quantitative structure-permeability relationships (QSPRs). Feature selection methods were used to examine in more detail the physicochemical parameters used in this study. A range of statistical measures to determine model quality were used. The inherently nonlinear nature of the skin data set was confirmed. The Gaussian process regression (GPR) methods yielded predictive models that offered statistically significant improvements over SLN and QSPR models with regard to predictivity (where the rank order was: GPR > SLN > QSPR). Feature selection analysis determined that the best GPR models were those that contained log P, melting point and the number of hydrogen bond donor groups as significant descriptors. Further statistical analysis also found that great synergy existed between certain parameters. It suggested that a number of the descriptors employed were effectively interchangeable, thus questioning the use of models where discrete variables are output, usually in the form of an equation. The use of a nonlinear GPR method produced models with significantly improved predictivity, compared with SLN or QSPR models. Feature selection methods were able to provide important mechanistic information. However, it was also shown that significant synergy existed between certain parameters, and as such it was possible to interchange certain descriptors (i.e. molecular weight and melting point) without incurring a loss of model quality. Such synergy suggested that a model constructed from discrete terms in an equation may not be the most appropriate way of representing mechanistic understandings of skin absorption.

  1. [Diagnosis and treatment of thyroid storm].

    PubMed

    Akamizu, Takashi

    2012-11-01

    Thyrotoxic storm is a life-threatening condition requiring emergency treatment. Neither its epidemiological data nor diagnostic criteria have been fully established. We clarified the clinical and epidemiological characteristics of thyroid storm using nationwide surveys and then formulate diagnostic criteria for thyroid storm. To perform the nationwide survey on thyroid storm, we first developed tentative diagnostic criteria for thyroid storm, mainly based upon the literature (the first edition). We analyzed the relationship of the major features of thyroid storm to mortality and to certain other features. Finally, based upon the findings of these surveys, we revised the diagnostic criteria. Thyrotoxic storm is still a life-threatening disorder with over 10% mortality in Japan.

  2. Re-Conceptualizing ASD within a Dimensional Framework: Positive, Negative, and Cognitive Feature Clusters

    ERIC Educational Resources Information Center

    Foss-Feig, Jennifer H.; McPartland, James C.; Anticevic, Alan; Wolf, Julie

    2016-01-01

    Introduction of the National Institute of Mental Health's Research Domain Criteria and revision of diagnostic classification for Autism Spectrum Disorder in the latest diagnostic manual call for a new way of conceptualizing heterogeneous ASD features. We propose a novel conceptualization of ASD, borrowing from the schizophrenia literature in…

  3. Characterization of Yb{sup 3+}:Sr{sub 5{minus}x}Ba{sub x}(PO{sub 4}){sub 3}F crystals for diode pumped lasers

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Bayramian, A.J.; Marshall, C.D.; Schaffers, K.I.

    Ytterbium-doped Sr{sub 5}(PO{sub 4}){sub 3}F (S-FAP) has been shown to be a useful material for diode pumping, since it displays high gain, low loss, and a long radiative lifetime. One of the issues with S-FAP is that it has a relatively narrow absorption bandwidth ({approximately}5 nm) at 900 nm, the diode-pumping wavelength, while the diode`s output bandwidth can be large ({approximately}10 nm). By changing the host slightly, the absorption feature can be broadened to better match the pump bandwidth. Four mixed crystal boules of Yb{sup 3+}:Sr{sub 5{minus}x}Ba{sub x}(PO{sub 4}){sub 3}F were grown by the Czochralski method with x = 0.25,more » 0.5, 1, and 2. The bandwidth of the 900-nm absorption feature was found to grow with increasing barium concentration from 4.7 nm to a maximum of 15.9 nm. Emission spectra showed a similar bandwidth increase with barium content from 4.9 nm to a maximum of 10 nm. Emission cross sections for these materials were deduced by the methods of reciprocity, the Einstein method, and small-signal gain. The absorption feature`s homogeneity was probed using a tunable pump source which qualitatively showed that the barium-broadened lines were at least partly inhomogeneous. Each of these materials lased with a variety of output couplers. This family of materials was found to provide suitable laser hosts where a broader absorption and/or emission bandwidth is desired.« less

  4. On the nature of the nova-like variable CD-42 deg 14462

    NASA Technical Reports Server (NTRS)

    Guinan, E. F.; Sion, E. M.

    1981-01-01

    Low dispersion long and short wavelength IUE spectra of the nova like system CD-42 deg 14462 were obtained on August 24 U.T. The short wave spectrum exhibits absorption features due to C III (lambda 1175), Lalpha 1216), NV (lambda1240), HeII (lambda 1640), SiIV (lambda1394), NIV (lambda1875) with CIV (lambda1550) as a P Cygni feature with blue shifted absorption suggesting the presence of material leaving the system. Possible interpretations of this object are discussed.

  5. Density diagnostics of ionized outflows in active galacitc nuclei

    NASA Astrophysics Data System (ADS)

    Mao, J.; Kaastra, J.; Mehdipour, M.; Raassen, T.; Gu, L.

    2017-10-01

    Ionized outflows in Active Galactic Nuclei are thought to influence their nuclear and local galactic environment. However, the distance of outflows with respect to the central engine is poorly constrained, which limits our understanding of the kinetic power by the outflows. Therefore, the impact of AGN outflows on their host galaxies is uncertain. Given the density of the outflows, their distance can be immediately obtained by the definition of the ionization parameter. Here we carry out a theoretical study of density diagnostics of AGN outflows using absorption lines from metastable levels in Be-like to F-like ions. With the new self-consistent photoionization model (PION) in the SPEX code, we are able to calculate ground and metastable level populations. This enable us to determine under what physical conditions these levels are significantly populated. We then identify characteristic transitions from these metastable levels in the X-ray band. Firm detections of absorption lines from such metastable levels are challenging for current grating instruments. The next generation of spectrometers like X-IFU onboard Athena will certainly identify the presence/absence of these density- sensitive absorption lines, thus tightly constraining the location and the kinetic power of AGN outflows.

  6. Applications and results of X-ray spectroscopy in implosion experiments on the National Ignition Facility

    NASA Astrophysics Data System (ADS)

    Epstein, R.; Regan, S. P.; Hammel, B. A.; Suter, L. J.; Scott, H. A.; Barrios, M. A.; Bradley, D. K.; Callahan, D. A.; Cerjan, C.; Collins, G. W.; Dixit, S. N.; Döppner, T.; Edwards, M. J.; Farley, D. R.; Fournier, K. B.; Glenn, S.; Glenzer, S. H.; Golovkin, I. E.; Hamza, A.; Hicks, D. G.; Izumi, N.; Jones, O. S.; Key, M. H.; Kilkenny, J. D.; Kline, J. L.; Kyrala, G. A.; Landen, O. L.; Ma, T.; MacFarlane, J. J.; Mackinnon, A. J.; Mancini, R. C.; McCrory, R. L.; Meyerhofer, D. D.; Meezan, N. B.; Nikroo, A.; Park, H.-S.; Patel, P. K.; Ralph, J. E.; Remington, B. A.; Sangster, T. C.; Smalyuk, V. A.; Springer, P. T.; Town, R. P. J.; Tucker, J. L.

    2017-03-01

    Current inertial confinement fusion experiments on the National Ignition Facility (NIF) [G. H. Miller, E. I. Moses, and C. R. Wuest, Opt. Eng. 43, 2841 (2004)] are attempting to demonstrate thermonuclear ignition using x-ray drive by imploding spherical targets containing hydrogen-isotope fuel in the form of a thin cryogenic layer surrounding a central volume of fuel vapor [J. Lindl, Phys. Plasmas 2, 3933 (1995)]. The fuel is contained within a plastic ablator layer with small concentrations of one or more mid-Z elements, e.g., Ge or Cu. The capsule implodes, driven by intense x-ray emission from the inner surface of a hohlraum enclosure irradiated by the NIF laser, and fusion reactions occur in the central hot spot near the time of peak compression. Ignition will occur if the hot spot within the compressed fuel layer attains a high-enough areal density to retain enough of the reaction product energy to reach nuclear reaction temperatures within the inertial hydrodynamic disassembly time of the fuel mass [J. Lindl, Phys. Plasmas 2, 3933 (1995)]. The primary purpose of the ablator dopants is to shield the ablator surface adjacent to the DT ice from heating by the hohlraum x-ray drive [S. W. Haan et al., Phys. Plasmas 18, 051001 (2011)]. Simulations predicted that these dopants would produce characteristic K-shell emission if ablator material mixed into the hot spot [B. A. Hammel et al., High Energy Density Phys. 6, 171 (2010)]. In NIF ignition experiments, emission and absorption features from these dopants appear in x-ray spectra measured with the hot-spot x-ray spectrometer in Supersnout II [S. P. Regan et al., "Hot-Spot X-Ray Spectrometer for the National Ignition Facility," to be submitted to Review of Scientific Instruments]. These include K-shell emission lines from the hot spot (driven primarily by inner-shell collisional ionization and dielectronic recombination) and photoionization edges, fluorescence, and absorption lines caused by the absorption of the hot-spot continuum in the shell. These features provide diagnostics of the central hot spot and the compressed shell, plus a measure of the shell mass that has mixed into the hot spot [S. P. Regan et al., Phys. Plasmas 19, 056307 (2012)] and evidence locating the origin of the mixed shell mass in the imploding ablator [S. P. Regan et al., Phys. Rev. Lett. 111, 045001 (2013)]. Spectra are analyzed and interpreted using detailed atomic models (including radiation-transport effects) to determine the characteristic temperatures, densities, and sizes of the emitting regions. A mix diagnostic based on enhanced continuum x-ray production, relative to neutron yield, provides sensitivity to the undoped shell material mixed into the hot spot [T. Ma et al., Phys. Rev. Lett., 111, 085004 (2013)]. Together, these mix-mass measurements confirm that mix is a serious impediment to ignition. The spectroscopy and atomic physics of shell dopants have become essential in confronting this impediment and will be described.

  7. Synthetic diagnostics platform for fusion plasmas (invited)

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Shi, L., E-mail: lshi@pppl.gov; Valeo, E. J.; Tobias, B. J.

    A Synthetic Diagnostics Platform (SDP) for fusion plasmas has been developed which provides state of the art synthetic reflectometry, beam emission spectroscopy, and Electron Cyclotron Emission (ECE) diagnostics. Interfaces to the plasma simulation codes GTC, XGC-1, GTS, and M3D-C{sup 1} are provided, enabling detailed validation of these codes. In this paper, we give an overview of SDP’s capabilities, and introduce the synthetic diagnostic modules. A recently developed synthetic ECE Imaging module which self-consistently includes refraction, diffraction, emission, and absorption effects is discussed in detail. Its capabilities are demonstrated on two model plasmas. The importance of synthetic diagnostics in validation ismore » shown by applying the SDP to M3D-C{sup 1} output and comparing it with measurements from an edge harmonic oscillation mode on DIII-D.« less

  8. Synthetic diagnostics platform for fusion plasmas (invited)

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Shi, L.; Valeo, E. J.; Tobias, B. J.

    A Synthetic Diagnostics Platform (SDP) for fusion plasmas has been developed which provides state of the art synthetic reflectometry, beam emission spectroscopy, and Electron Cyclotron Emission (ECE) diagnostics. Interfaces to the plasma simulation codes GTC, XGC-1, GTS, and M3D-C-1 are provided, enabling detailed validation of these codes. In this paper, we give an overview of SDP's capabilities, and introduce the synthetic diagnostic modules. A recently developed synthetic ECE Imaging module which self-consistently includes refraction, diffraction, emission, and absorption effects is discussed in detail. Its capabilities are demonstrated on two model plasmas. Finally, the importance of synthetic diagnostics in validation ismore » shown by applying the SDP to M3D-C 1 output and comparing it with measurements from an edge harmonic oscillation mode on DIII-D.« less

  9. Synthetic diagnostics platform for fusion plasmas (invited)

    DOE PAGES

    Shi, L.; Valeo, E. J.; Tobias, B. J.; ...

    2016-08-26

    A Synthetic Diagnostics Platform (SDP) for fusion plasmas has been developed which provides state of the art synthetic reflectometry, beam emission spectroscopy, and Electron Cyclotron Emission (ECE) diagnostics. Interfaces to the plasma simulation codes GTC, XGC-1, GTS, and M3D-C-1 are provided, enabling detailed validation of these codes. In this paper, we give an overview of SDP's capabilities, and introduce the synthetic diagnostic modules. A recently developed synthetic ECE Imaging module which self-consistently includes refraction, diffraction, emission, and absorption effects is discussed in detail. Its capabilities are demonstrated on two model plasmas. Finally, the importance of synthetic diagnostics in validation ismore » shown by applying the SDP to M3D-C 1 output and comparing it with measurements from an edge harmonic oscillation mode on DIII-D.« less

  10. Doppler-free satellites of resonances of electromagnetically induced transparency and absorption on the D 2 lines of alkali metals

    NASA Astrophysics Data System (ADS)

    Sargsyan, A.; Sarkisyan, D.; Staedter, D.; Akulshin, A. M.

    2006-11-01

    The peculiarities of intra-Doppler structures that are observed in the atomic absorption spectrum of alkali metals with the help of two independent lasers have been studied. These structures accompany ultranarrow coherent resonances of electromagnetically induced transparency and absorption. With the D 2 line of rubidium taken as an example, it is shown that, in the scheme of unidirectional waves, the maximum number of satellite resonances caused by optical pumping selective with respect to the atomic velocity is equal to seven, while only six resonances are observed in the traditional scheme of saturated absorption with counterpropagating waves of the same frequency. The spectral position of the resonances and their polarity depend on the frequency of the saturating radiation, while their number and relative amplitude depend also on the experimental geometry. These features are of general character and should show themselves in the absorption spectrum on the D 2 lines of all alkali metals. An explanation of these features is given. The calculated spectral separations between the resonances are compared to the experimental ones, and their possible application is discussed.

  11. Laser Absorption by Over-Critical Plasmas

    NASA Astrophysics Data System (ADS)

    May, J.; Tonge, J.; Fiuza, F.; Fonseca, R. A.; Silva, L. O.; Mori, W. B.

    2015-11-01

    Absorption of high intensity laser light by matter has important applications to emerging sciences and technology, such as Fast Ignition ICF and ion acceleration. As such, understanding the underlying mechanisms of this absorption is key to developing these technologies. Critical features which distinguish the interaction of high intensity light - defined here as a laser field having a normalized vector potential greater than unity - are that the reaction of the material to the fields results in sharp high-density interfaces; and that the movement of the electrons is in general relativistic, both in a fluid and a thermal sense. The results of these features are that the absorption mechanisms are qualitatively distinct from those at lower intensities. We will review previous work, by our group and others, on the absorption mechanisms, and highlight current research. We will show that the standing wave structure of the reflected laser light is key to particle dynamics for normally incident lasers. The authors acknowledge the support of the Department of Energy under contract DE-NA 0001833 and the National Science Foundation under contract ACI 1339893.

  12. Numerical indicators of absorption spectra of green leaf extract obtained from plants of different life forms.

    PubMed

    Koldaev, Vladimir M; Manyakhin, Artem Yu

    2018-06-05

    The study was carried out using 58 species of terrestrial plants of different life forms at the start of their fruiting stage. Photoreceptive systems of the leaves were assessed by means of unconventional numerical indicators of absorption spectra, relative photoabsorption coefficient, photosynthetic pigments' integral absorption intensity and relative absorption intensity coefficient. As the study showed, the leaves of all trees and light-demanding grasses favoring open spaces, which were subjected to the study were featured by the lowest values of numerical indicators of absorption spectra (NIAS). Shade-demanding grasses, which grow beneath the canopy, by contrast, were featured by the highest NIAS values. These values of the shrub leaves were in between those of light-demanding plants and shade-demanding ones. The results obtained are consistent with modern visions concerning the biochemistry and the physiology of plants' photoreceptive system. It is appropriate to apply the NIAS, which were used in this study and reflect a leaf's photoreceptive properties, as spectrophotometric criteria for monitoring and environmental management of natural plant resources and agricultural plants. Copyright © 2018 Elsevier B.V. All rights reserved.

  13. On the state of the emitter of the 3.3 micron unidentified infrared band - Absorption spectroscopy of polycyclic aromatic hydrocarbon species

    NASA Technical Reports Server (NTRS)

    Flickinger, Gregory C.; Wdowiak, Thomas J.; Gomez, Percy L.

    1991-01-01

    Results of absorption measurements indicate that the PAH species responsible for the UIR (unidentified infrared) emission probably exist in a condensed form rather than as isolated molecules. It is shown that the peak absorption of the C-H stretch feature of vapor-phase PAHs occurs at a higher frequency than that of the condensed-phase PAHs and does not match the 3.289-micron interstellar feature. The vapor-phase experiments duplicate the phenomenon of the 3.3-micron profile simplification of PAH in KBr at elevated temperature. This confirms that the change of the profile with temperature is an intrinsic molecular effect, and is not a consequence of matrix (KBr) or condensed state interactions.

  14. Continuous Wave Ring-Down Spectroscopy Diagnostic for Measuring Argon Ion and Neutral Velocity Distribution Functions in a Helicon Plasma

    NASA Astrophysics Data System (ADS)

    McCarren, Dustin; Vandervort, Robert; Soderholm, Mark; Carr, Jerry, Jr.; Galante, Matthew; Magee, Richard; Scime, Earl

    2013-10-01

    Cavity Ring-Down Spectroscopy CRDS is a proven, ultra-sensitive, cavity enhanced absorption spectroscopy technique. When combined with a continuous wavelength (CW) diode laser that has a sufficiently narrow line width, the Doppler broadened absorption line, i.e., the velocity distribution functions (IVDFs), can be measured. Measurements of IVDFS can be made using established techniques, such as laser induced fluorescence (LIF). However, LIF suffers from the requirement that the initial state of the LIF sequence have a substantial density. This usually limits LIF to ions and atoms with large metastable state densities for the given plasma conditions. CW-CRDS is considerably more sensitive than LIF and can potentially be applied to much lower density populations of ion and atom states. In this work we present ongoing measurements of the CW-CRDS diagnostic and discuss the technical challenges of using CW-CRDS to make measurements in a helicon plasma.

  15. The relative importance of aerosol scattering and absorption in remote sensing

    NASA Technical Reports Server (NTRS)

    Fraser, R. S.; Kaufman, Y. J.

    1985-01-01

    Previous attempts to explain the effect of aerosols on satellite measurements of surface properties for the visible and near-infrared spectrum have emphasized the amount of aerosols without consideration of their absorption properties. In order to estimate the importance of absorption, the radiances of the sunlight scattered from models of the earth-atmosphere system are computed as functions of the aerosol optical thickness and absorption. The absorption effect is small where the surface reflectance is weak, but is important for strong reflectance. These effects on classification of surface features, measuring vegetation index, and measuring surface reflectance are presented.

  16. Predicting diagnostic error in radiology via eye-tracking and image analytics: Preliminary investigation in mammography

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Voisin, Sophie; Tourassi, Georgia D.; Pinto, Frank

    2013-10-15

    Purpose: The primary aim of the present study was to test the feasibility of predicting diagnostic errors in mammography by merging radiologists’ gaze behavior and image characteristics. A secondary aim was to investigate group-based and personalized predictive models for radiologists of variable experience levels.Methods: The study was performed for the clinical task of assessing the likelihood of malignancy of mammographic masses. Eye-tracking data and diagnostic decisions for 40 cases were acquired from four Radiology residents and two breast imaging experts as part of an IRB-approved pilot study. Gaze behavior features were extracted from the eye-tracking data. Computer-generated and BIRADS imagesmore » features were extracted from the images. Finally, machine learning algorithms were used to merge gaze and image features for predicting human error. Feature selection was thoroughly explored to determine the relative contribution of the various features. Group-based and personalized user modeling was also investigated.Results: Machine learning can be used to predict diagnostic error by merging gaze behavior characteristics from the radiologist and textural characteristics from the image under review. Leveraging data collected from multiple readers produced a reasonable group model [area under the ROC curve (AUC) = 0.792 ± 0.030]. Personalized user modeling was far more accurate for the more experienced readers (AUC = 0.837 ± 0.029) than for the less experienced ones (AUC = 0.667 ± 0.099). The best performing group-based and personalized predictive models involved combinations of both gaze and image features.Conclusions: Diagnostic errors in mammography can be predicted to a good extent by leveraging the radiologists’ gaze behavior and image content.« less

  17. Diagnostic dilemma of unicystic ameloblastoma: novel parameters to differentiate unicystic ameloblastoma from common odontogenic cysts.

    PubMed

    Gunawardhana, Kuda Singappulige Niluka Darshani; Jayasooriya, Primali Rukmal; Tilakaratne, Wanninayake Mudiyanselage

    2014-08-01

    Diagnostic criteria that have been specified for unicystic ameloblastomas (UAs) are not always helpful to differentiate these cystic tumors from common odontogenic cysts. The aim of this study therefore was to identify additional histopathological features (other than the features considered for the diagnosis of UA at present) that would be helpful to differentiate UA from odontogenic cysts. One hundred histopathologically confirmed unicystic ameloblastomas and 20 cases each of radicular, inflamed dentigerous and non-inflamed dentigerous cysts were selected. Histopathological features of the UAs that are not used as diagnostic criteria at present were identified. Hyperplastic arcading epithelial proliferations with stellate-reticulum-like and vacuolated cells were always seen associated with inflammation in odontogenic cysts, while in UA plexiform-like areas were also seen without inflammation (P < 0.001). In addition, a spiky rete pattern was observed in non-inflamed UA while this pattern was observed only in inflamed odontogenic cysts. Furthermore, spiky retes together with subepithelial hyalinization were usually observed in UAs while only subepithelial hyalinization was observed in non-inflamed dentigerous cysts. Combinations of histopathological features were identified to differentiate non-inflamed UA from common odontogenic cysts. However, presence of inflammatory changes in UA precludes the use of features identified in the present study for diagnostic purposes. © 2013 Wiley Publishing Asia Pty Ltd.

  18. Detection of water and/or hydroxyl on asteroid (16) Psyche

    USGS Publications Warehouse

    Takir, Driss; Reddy, Vishnu; Sanchez, Juan A.; Shepard, Michael K.; Emery, Joshua P.

    2016-01-01

    In order to search for evidence of hydration on M-type asteroid (16) Psyche, we observed this object in the 3 μm spectral region using the long-wavelength cross-dispersed (LXD: 1.9–4.2 μm) mode of the SpeX spectrograph/imager at the NASA Infrared Telescope Facility. Our observations show that Psyche exhibits a 3 μm absorption feature, attributed to water or hydroxyl. The 3 μm absorption feature is consistent with the hydration features found on the surfaces of water-rich asteroids, attributed to OH- and/or H2O-bearing phases (phyllosilicates). The detection of a 3 μm hydration absorption band on Psyche suggests that this asteroid may not be a metallic core, or it could be a metallic core that has been impacted by carbonaceous material over the past 4.5 Gyr. Our results also indicate rotational spectral variations, which we suggest reflect heterogeneity in the metal/silicate ratio on the surface of Psyche.

  19. Detection of Water and/or Hydroxyl on Asteroid (16) Psyche

    NASA Astrophysics Data System (ADS)

    Takir, Driss; Reddy, Vishnu; Sanchez, Juan A.; Shepard, Michael K.; Emery, Joshua P.

    2017-01-01

    In order to search for evidence of hydration on M-type asteroid (16) Psyche, we observed this object in the 3 μm spectral region using the long-wavelength cross-dispersed (LXD: 1.9-4.2 μm) mode of the SpeX spectrograph/imager at the NASA Infrared Telescope Facility. Our observations show that Psyche exhibits a 3 μm absorption feature, attributed to water or hydroxyl. The 3 μm absorption feature is consistent with the hydration features found on the surfaces of water-rich asteroids, attributed to OH- and/or H2O-bearing phases (phyllosilicates). The detection of a 3 μm hydration absorption band on Psyche suggests that this asteroid may not be a metallic core, or it could be a metallic core that has been impacted by carbonaceous material over the past 4.5 Gyr. Our results also indicate rotational spectral variations, which we suggest reflect heterogeneity in the metal/silicate ratio on the surface of Psyche.

  20. DETECTION OF WATER AND/OR HYDROXYL ON ASTEROID (16) Psyche

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Takir, Driss; Reddy, Vishnu; Sanchez, Juan A.

    In order to search for evidence of hydration on M-type asteroid (16) Psyche, we observed this object in the 3 μ m spectral region using the long-wavelength cross-dispersed (LXD: 1.9–4.2 μ m) mode of the SpeX spectrograph/imager at the NASA Infrared Telescope Facility. Our observations show that Psyche exhibits a 3 μ m absorption feature, attributed to water or hydroxyl. The 3 μ m absorption feature is consistent with the hydration features found on the surfaces of water-rich asteroids, attributed to OH- and/or H{sub 2}O-bearing phases (phyllosilicates). The detection of a 3 μ m hydration absorption band on Psyche suggestsmore » that this asteroid may not be a metallic core, or it could be a metallic core that has been impacted by carbonaceous material over the past 4.5 Gyr. Our results also indicate rotational spectral variations, which we suggest reflect heterogeneity in the metal/silicate ratio on the surface of Psyche.« less

  1. Visualizing the non-equilibrium dynamics of photoinduced intramolecular electron transfer with femtosecond X-ray pulses

    PubMed Central

    Canton, Sophie E.; Kjær, Kasper S.; Vankó, György; van Driel, Tim B.; Adachi, Shin-ichi; Bordage, Amélie; Bressler, Christian; Chabera, Pavel; Christensen, Morten; Dohn, Asmus O.; Galler, Andreas; Gawelda, Wojciech; Gosztola, David; Haldrup, Kristoffer; Harlang, Tobias; Liu, Yizhu; Møller, Klaus B.; Németh, Zoltán; Nozawa, Shunsuke; Pápai, Mátyás; Sato, Tokushi; Sato, Takahiro; Suarez-Alcantara, Karina; Togashi, Tadashi; Tono, Kensuke; Uhlig, Jens; Vithanage, Dimali A.; Wärnmark, Kenneth; Yabashi, Makina; Zhang, Jianxin; Sundström, Villy; Nielsen, Martin M.

    2015-01-01

    Ultrafast photoinduced electron transfer preceding energy equilibration still poses many experimental and conceptual challenges to the optimization of photoconversion since an atomic-scale description has so far been beyond reach. Here we combine femtosecond transient optical absorption spectroscopy with ultrafast X-ray emission spectroscopy and diffuse X-ray scattering at the SACLA facility to track the non-equilibrated electronic and structural dynamics within a bimetallic donor–acceptor complex that contains an optically dark centre. Exploiting the 100-fold increase in temporal resolution as compared with storage ring facilities, these measurements constitute the first X-ray-based visualization of a non-equilibrated intramolecular electron transfer process over large interatomic distances. Experimental and theoretical results establish that mediation through electronically excited molecular states is a key mechanistic feature. The present study demonstrates the extensive potential of femtosecond X-ray techniques as diagnostics of non-adiabatic electron transfer processes in synthetic and biological systems, and some directions for future studies, are outlined. PMID:25727920

  2. Visualizing the non-equilibrium dynamics of photoinduced intramolecular electron transfer with femtosecond X-ray pulses

    DOE PAGES

    Canton, Sophie E.; Kjær, Kasper S.; Vankó, György; ...

    2015-03-02

    Ultrafast photoinduced electron transfer preceding energy equilibration still poses many experimental and conceptual challenges to the optimization of photoconversion since an atomic-scale description has so far been beyond reach. Here we combine femtosecond transient optical absorption spectroscopy with ultrafast X-ray emission spectroscopy and diffuse X-ray scattering at the SACLA facility to track the non-equilibrated electronic and structural dynamics within a bimetallic donor–acceptor complex that contains an optically dark centre. Exploiting the 100-fold increase in temporal resolution as compared with storage ring facilities, these measurements constitute the first X-ray-based visualization of a non-equilibrated intramolecular electron transfer process over large interatomic distances.more » Thus experimental and theoretical results establish that mediation through electronically excited molecular states is a key mechanistic feature. The present study demonstrates the extensive potential of femtosecond X-ray techniques as diagnostics of non-adiabatic electron transfer processes in synthetic and biological systems, and some directions for future studies, are outlined.« less

  3. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Hornemann, Andrea, E-mail: andrea.hornemann@ptb.de; Hoehl, Arne, E-mail: arne.hoehl@ptb.de; Ulm, Gerhard, E-mail: gerhard.ulm@ptb.de

    Bio-diagnostic assays of high complexity rely on nanoscaled assay recognition elements that can provide unique selectivity and design-enhanced sensitivity features. High throughput performance requires the simultaneous detection of various analytes combined with appropriate bioassay components. Nanoparticle induced sensitivity enhancement, and subsequent multiplexed capability Surface-Enhanced InfraRed Absorption (SEIRA) assay formats are fitting well these purposes. SEIRA constitutes an ideal platform to isolate the vibrational signatures of targeted bioassay and active molecules. The potential of several targeted biolabels, here fluorophore-labeled antibody conjugates, chemisorbed onto low-cost biocompatible gold nano-aggregates substrates have been explored for their use in assay platforms. Dried films were analyzedmore » by synchrotron radiation based FTIR/SEIRA spectro-microscopy and the resulting complex hyperspectral datasets were submitted to automated statistical analysis, namely Principal Components Analysis (PCA). The relationships between molecular fingerprints were put in evidence to highlight their spectral discrimination capabilities. We demonstrate that robust spectral encoding via SEIRA fingerprints opens up new opportunities for fast, reliable and multiplexed high-end screening not only in biodiagnostics but also in vitro biochemical imaging.« less

  4. A broadband Tm/Ho-doped fiber laser tunable from 1.8 to 2.09 µm for intracavity absorption spectroscopy

    NASA Astrophysics Data System (ADS)

    Fjodorow, Peter; Hellmig, Ortwin; Baev, Valery M.

    2018-04-01

    A broadband tunable Tm/Ho-doped fiber laser is developed for sensitive in situ measurements of intracavity absorption spectra in the spectral range of 4780-5560 cm-1. This spectral range includes an atmospheric transmission window enabling sensitive measurements of various species. The spectral bandwidth of laser emission varies from 20 to 60 cm-1 and is well suitable for multicomponent spectroscopy. The sensitivity achieved in cw operation corresponds to an effective absorption path length of L eff = 20 km, with a spectral noise of less than 1%. The spectroscopic system is applied for measurements of absorption spectra of H2O, NH3 and for simultaneous in situ detection of three isotopes of CO2 in human breath, which is important for medical diagnostics procedures.

  5. Impact of absorption in the top layer of a two layer sample on spectroscopic spectral domain interferometry of the bottom layer

    NASA Astrophysics Data System (ADS)

    Fleischhauer, F.; Feuchter, T.; Leick, L.; Rajendram, R.; Podoleanu, A.

    2018-03-01

    Spectroscopic spectral domain interferometry and spectroscopic optical coherence tomography combine depth information with spectrally-resolved localised absorption data. These additional data can improve diagnostics by giving access to functional information of the investigated sample. One possible application is measuring oxygenation levels at the retina for earlier detection of several eye diseases. Here measurements with different hollow glass tube phantoms are shown to measure the impact of a superficial absorbing layer on the precision of reconstructed attenuation spectra of a deeper layer. Measurements show that a superficial absorber has no impact on the reconstructed absorption spectrum of the deeper absorber. Even when diluting the concentration of the deeper absorber so far that an incorrect absorption maximum is obtained, still no influence of the superficially placed absorber is identified.

  6. Noninvasive express diagnostics of pulmonary diseases based on control of patient's gas emission using methods of IR and terahertz laser spectroscopy

    NASA Astrophysics Data System (ADS)

    Starikova, M. K.; Bulanova, A. A.; Bukreeva, E. B.; Karapuzikov, A. A.; Karapuzikov, A. I.; Kistenev, Y. V.; Klementyev, V. M.; Kolker, D. B.; Kuzmin, D. A.; Nikiforova, O. Y.; Ponomarev, Yu. N.; Sherstov, I. V.; Boyko, A. A.

    2013-11-01

    Pulmonary diseases diagnostics always occupies one of the key positions in medicine practices. A large variety of high technology methods are used today, but none of them cannot be used for early screening of pulmonary diseases. We discuss abilities of methods of IR and terahertz laser spectroscopy for noninvasive express diagnostics of pulmonary diseases on a base of analysis of absorption spectra of patient's gas emission, in particular, exhaled air. Experience in the field of approaches to experimental data analysis and hard-ware realization of gas analyzers for medical applications is also discussed.

  7. H I absorption in nearby compact radio galaxies

    NASA Astrophysics Data System (ADS)

    Glowacki, M.; Allison, J. R.; Sadler, E. M.; Moss, V. A.; Curran, S. J.; Musaeva, A.; Deng, C.; Parry, R.; Sligo, M. C.

    2017-05-01

    H I absorption studies yield information on both active galactic nucleus (AGN) feeding and feedback processes. This AGN activity interacts with the neutral gas in compact radio sources, which are believed to represent the young or recently re-triggered AGN population. We present the results of a survey for H I absorption in a sample of 66 compact radio sources at 0.040 < z < 0.096 with the Australia Telescope Compact Array. In total, we obtained seven detections, five of which are new, with a large range of peak optical depths (3-87 per cent). Of the detections, 71 per cent exhibit asymmetric, broad (ΔvFWHM > 100 km s-1) features, indicative of disturbed gas kinematics. Such broad, shallow and offset features are also found within low-excitation radio galaxies which is attributed to disturbed circumnuclear gas, consistent with early-type galaxies typically devoid of a gas-rich disc. Comparing mid-infrared colours of our galaxies with H I detections indicates that narrow and deep absorption features are preferentially found in late-type and high-excitation radio galaxies in our sample. These features are attributed to gas in galactic discs. By combining XMM-Newton archival data with 21-cm data, we find support that absorbed X-ray sources may be good tracers of H I content within the host galaxy. This sample extends previous H I surveys in compact radio galaxies to lower radio luminosities and provides a basis for future work exploring the higher redshift universe.

  8. [Somatopsychic and cenesthetic types of schizophrenia: common features and discrepancies].

    PubMed

    Wichowicz, Hubert M; Cubała, Wiesław J

    2010-01-01

    The aim of this paper is to discuss the development of the concepts of cenesthetic type of schizophrenia and somatopsychic type of schizophrenia along with the review of differences between those two diagnostic approaches in scope of their historical background and the current diagnostic concepts. Those independently described diagnostic phenomena have some common features. However, the cenesthetic type of schizophrenia emphasises sensory elements of the disorders and includes a broader spectrum of the psychopathology while the somatopsychic type of schizophrenia focuses on the thought disorders and strictly schizophrenic psychopathology.

  9. Exploration of CdTe quantum dots as mesoscale pressure sensors via time-resolved shock-compression photoluminescent emission spectroscopy

    NASA Astrophysics Data System (ADS)

    Kang, Zhitao; Banishev, Alexandr A.; Lee, Gyuhyon; Scripka, David A.; Breidenich, Jennifer; Xiao, Pan; Christensen, James; Zhou, Min; Summers, Christopher J.; Dlott, Dana D.; Thadhani, Naresh N.

    2016-07-01

    The nanometer size of CdTe quantum dots (QDs) and their unique optical properties, including size-tunable narrow photoluminescent emission, broad absorption, fast photoluminescence decay, and negligible light scattering, are ideal features for spectrally tagging the shock response of localized regions in highly heterogeneous materials such as particulate media. In this work, the time-resolved laser-excited photoluminescence response of QDs to shock-compression was investigated to explore their utilization as mesoscale sensors for pressure measurements and in situ diagnostics during shock loading experiments. Laser-driven shock-compression experiments with steady-state shock pressures ranging from 2.0 to 13 GPa were performed on nanocomposite films of CdTe QDs dispersed in a soft polyvinyl alcohol polymer matrix and in a hard inorganic sodium silicate glass matrix. Time-resolved photoluminescent emission spectroscopy was used to correlate photoluminescence changes with the history of shock pressure and the dynamics of the matrix material surrounding the QDs. The results revealed pressure-induced blueshifts in emitted wavelength, decreases in photoluminescent emission intensity, reductions in peak width, and matrix-dependent response times. Data obtained for these QD response characteristics serve as indicators for their use as possible time-resolved diagnostics of the dynamic shock-compression response of matrix materials in which such QDs are embedded as in situ sensors.

  10. Exploration of CdTe quantum dots as mesoscale pressure sensors via time-resolved shock-compression photoluminescent emission spectroscopy

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Kang, Zhitao; School of Materials Science and Engineering, Georgia Institute of Technology, Atlanta, Georgia 30332-0245; Banishev, Alexandr A.

    The nanometer size of CdTe quantum dots (QDs) and their unique optical properties, including size-tunable narrow photoluminescent emission, broad absorption, fast photoluminescence decay, and negligible light scattering, are ideal features for spectrally tagging the shock response of localized regions in highly heterogeneous materials such as particulate media. In this work, the time-resolved laser-excited photoluminescence response of QDs to shock-compression was investigated to explore their utilization as mesoscale sensors for pressure measurements and in situ diagnostics during shock loading experiments. Laser-driven shock-compression experiments with steady-state shock pressures ranging from 2.0 to 13 GPa were performed on nanocomposite films of CdTe QDs dispersedmore » in a soft polyvinyl alcohol polymer matrix and in a hard inorganic sodium silicate glass matrix. Time-resolved photoluminescent emission spectroscopy was used to correlate photoluminescence changes with the history of shock pressure and the dynamics of the matrix material surrounding the QDs. The results revealed pressure-induced blueshifts in emitted wavelength, decreases in photoluminescent emission intensity, reductions in peak width, and matrix-dependent response times. Data obtained for these QD response characteristics serve as indicators for their use as possible time-resolved diagnostics of the dynamic shock-compression response of matrix materials in which such QDs are embedded as in situ sensors.« less

  11. Precise Modelling of Telluric Features in Astronomical Spectra

    NASA Astrophysics Data System (ADS)

    Seifahrt, A.; Käufl, H. U.; Zängl, G.; Bean, J.; Richter, M.; Siebenmorgen, R.

    2010-12-01

    Ground-based astronomical observations suffer from the disturbing effects of the Earth's atmosphere. Oxygen, water vapour and a number of atmospheric trace gases absorb and emit light at discrete frequencies, shaping observing bands in the near- and mid-infrared and leaving their fingerprints - telluric absorption and emission lines - in astronomical spectra. The standard approach of removing the absorption lines is to observe a telluric standard star: a time-consuming and often imperfect solution. Alternatively, the spectral features of the Earth's atmosphere can be modelled using a radiative transfer code, often delivering a satisfying solution that removes these features without additional observations. In addition the model also provides a precise wavelength solution and an instrumental profile.

  12. Mid-infrared interferometric variability of DG Tau: implications for the inner-disk structure .

    NASA Astrophysics Data System (ADS)

    Ábrahám, P.; Varga, J.; Gabányi, K. É.; Chen, L.; Kóspál, Á.; Ratzka, Th.; van Boekel, R.; Mosoni, L.; Henning, Th.

    DG Tau is a low-mass young star whose strongly accreting disk shows a variable 10 mu m silicate feature, that may even turn temporarily from emission to absorption. Aiming to find the physical reason of this variability, we analysed multiepoch VLTI/MIDI interferometric observations. We found that the inner disk within 3 au radius exhibits a 10 mu m absorption feature related to amorphous silicate grains, while the outer disk displays a variable crystalline feature in emission, similar in shape to the spectrum of comet Hale-Bopp. The variability may be related to a fluctuating amount of dusty material above the disk surface, possibly due to turbulence.

  13. Correlation between high-resolution remote-sensing imagery and detailed field mapping in Cordilleran Miogeocline

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Feldman, S.C.; Taranik, J.V.

    1986-05-01

    Selected areas were mapped at a scale of 1:6000 in the southern hot Creek Range (south-central Nevada), which is underlain by Paleozoic autochthonous limestone, shale, and sandstone, Paleozoic allochthonous chert and siltstone, and Tertiary rhyolitic to dactitic ash flow tuff. The mapping was compared with computer-processed Airborne Imaging Spectrometer (AIS) data and Landsat Thematic Mapper (TM) imagery. The AIS imagery of the Hot Creek Range was acquired in 1984 by a NASA C-130 aircraft; it has a spatial resolution of 12 m, and swath width of 380 m. The sensor was developed by the Jet Propulsion Laboratory and is themore » first in a series of NASA imaging spectrometers. The AIS collects 128 spectral bands, having a bandwidth of approximately 9 nm, in the short-wave infrared between 1.2 and 2.4 ..mu..m. This part of the spectrum contains important narrow spectral absorption features for the carbonate ion, hydroxyl ion, and water of hydration. Using computer-processed AIS imagery, therefore, the authors can separate calcite from dolomite, and kaolinite from illite and montmorillonite as well as differentiate geologic units containing these minerals. On the AIS imagery, the Upper Mississippian Tripon Pass Limestone shows a distinctive calcite absorption feature at 2.34 ..mu..m; this feature is not as pronounced in Cambrian and Ordovician limestones. The dolomitized Nevada Formation exhibits the dolomite absorption feature at 2.32 ..mu..m. Clay mineral absorption features near 2.2 ..mu..m can be distinguished in altered volcanics. Mineralogic identification was confirmed with field and laboratory spectroradiometer measurements, thin-section examination, and x-ray analysis. AIS results and field mapping were also compared to computer-processed Landsat TM imagery, the highest spectral and spatial resolution worldwide data set currently available.« less

  14. Observational Evidence Linking Interstellar UV Absorption to PAH Molecules

    NASA Astrophysics Data System (ADS)

    Blasberger, Avi; Behar, Ehud; Perets, Hagai B.; Brosch, Noah; Tielens, Alexander G. G. M.

    2017-02-01

    The 2175 Å UV extinction feature was discovered in the mid-1960s, yet its physical origin remains poorly understood. One suggestion is absorption by polycyclic aromatic hydrocarbon (PAH) molecules, which is supported by theoretical molecular structure computations and by laboratory experiments. PAHs are positively detected by their 3.3, 6.2, 7.7, 8.6, 11.3, and 12.7 μm IR emission bands, which are specified by their modes of vibration. A definitive empirical link between the 2175 Å UV extinction and the IR PAH emission bands, however, is still missing. We present a new sample of hot stars that have both 2175 Å absorption and IR PAH emission. We find significant shifts of the central wavelength of the UV absorption feature, up to 2350 Å, but predominantly in stars that also have IR PAH emission. These UV shifts depend on stellar temperature in a fashion that is similar to the shifts of the 6.2 and 7.7 μm IR PAH bands, that is, the features are increasingly more redshifted as the stellar temperature decreases, but only below ˜15 kK. Above 15 kK both UV and IR features retain their nominal values. Moreover, we find a suggestive correlation between the UV and IR shifts. We hypothesize that these similar dependences of both the UV and IR features on stellar temperature hint at a common origin of the two in PAH molecules and may establish the missing link between the UV and IR observations. We further suggest that the shifts depend on molecular size, and that the critical temperature of ˜15 kK above which no shifts are observed is related to the onset of UV-driven hot-star winds and their associated shocks.

  15. Data Processing Algorithm for Diagnostics of Combustion Using Diode Laser Absorption Spectrometry.

    PubMed

    Mironenko, Vladimir R; Kuritsyn, Yuril A; Liger, Vladimir V; Bolshov, Mikhail A

    2018-02-01

    A new algorithm for the evaluation of the integral line intensity for inferring the correct value for the temperature of a hot zone in the diagnostic of combustion by absorption spectroscopy with diode lasers is proposed. The algorithm is based not on the fitting of the baseline (BL) but on the expansion of the experimental and simulated spectra in a series of orthogonal polynomials, subtracting of the first three components of the expansion from both the experimental and simulated spectra, and fitting the spectra thus modified. The algorithm is tested in the numerical experiment by the simulation of the absorption spectra using a spectroscopic database, the addition of white noise, and the parabolic BL. Such constructed absorption spectra are treated as experimental in further calculations. The theoretical absorption spectra were simulated with the parameters (temperature, total pressure, concentration of water vapor) close to the parameters used for simulation of the experimental data. Then, spectra were expanded in the series of orthogonal polynomials and first components were subtracted from both spectra. The value of the correct integral line intensities and hence the correct temperature evaluation were obtained by fitting of the thus modified experimental and simulated spectra. The dependence of the mean and standard deviation of the evaluation of the integral line intensity on the linewidth and the number of subtracted components (first two or three) were examined. The proposed algorithm provides a correct estimation of temperature with standard deviation better than 60 K (for T = 1000 K) for the line half-width up to 0.6 cm -1 . The proposed algorithm allows for obtaining the parameters of a hot zone without the fitting of usually unknown BL.

  16. Si K EDGE STRUCTURE AND VARIABILITY IN GALACTIC X-RAY BINARIES

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Schulz, Norbert S.; Corrales, Lia; Canizares, Claude R.

    2016-08-10

    We survey the Si K edge structure in various absorbed Galactic low-mass X-ray binaries (LMXBs) to study states of silicon in the inter- and circum-stellar medium. The bulk of these LMXBs lie toward the Galactic bulge region and all have column densities above 10{sup 22} cm{sup −2}. The observations were performed using the Chandra High Energy Transmission Grating Spectrometer. The Si K edge in all sources appears at an energy value of 1844 ± 0.001 eV. The edge exhibits significant substructure that can be described by a near edge absorption feature at 1849 ± 0.002 eV and a far edgemore » absorption feature at 1865 ± 0.002 eV. Both of these absorption features appear variable with equivalent widths up to several mÅ. We can describe the edge structure using several components: multiple edge functions, near edge absorption excesses from silicates in dust form, signatures from X-ray scattering optical depths, and a variable warm absorber from ionized atomic silicon. The measured optical depths of the edges indicate much higher values than expected from atomic silicon cross sections and interstellar medium abundances, and they appear consistent with predictions from silicate X-ray absorption and scattering. A comparison with models also indicates a preference for larger dust grain sizes. In many cases, we identify Si xiii resonance absorption and determine ionization parameters between log ξ = 1.8 and 2.8 and turbulent velocities between 300 and 1000 km s{sup −1}. This places the warm absorber in close vicinity of the X-ray binaries. In some data, we observe a weak edge at 1.840 keV, potentially from a lesser contribution of neutral atomic silicon.« less

  17. Search for volatiles on icy satellites. I. Europa

    USGS Publications Warehouse

    Brown, R.H.; Cruikshank, D.P.; Tokunaga, A.T.; Smith, R.G.; Clark, R.N.

    1988-01-01

    New reflectance spectra have been obtained for both the leading and trailing sides of Europa, using the Cooled Grating Array Spectrometer (CGAS) of the NASA Infrared Telescope Facility (IRTF). The spectra are of higher precision than any yet obtained. Spectra of Europa's trailing side (central meridian longitude ???300??) obtained in 1985 show two weak absorptions near 2.2 and 2.3 ??m. Both of these features as well as others are seen in spectra obtained by R. N. Clark, R. B. Singer, P. D. Owensby, and F.P. Fanale (1980a, Bull. Amer. Astron. Soc. 12, 713-714) at similar central meridian longitude. Data obtained with an improved detector array in 1986, however, do not show the absorptions seen in the 1980 and 1985 spectra. It is not clear why the newest data do not show the apparent absorptions seen in previous years, but the suggestion is that either the 1980 and 1985 data are spurious or that the material responsible for the weak absorptions is no longer detectable. Analysis of the 1980 and 1985 data did not reveal any obvious source of systematic error capable of introducing spurious features, but we are skeptical of any explanation that cites transient deposition, movement, and/or destruction of material on Europa's trailing side to account for the nondetection of the features in the 1986 data. If the weak absorptions seen in the 1980 and 1985 data are real, they can be interpreted as indicating the transient spectroscopic presence of a molecular component on Europa's trailing side different from the water ice that is known to be the dominant surface constituent. Further monitoring is required to determine if the apparent absorptions are real. ?? 1988.

  18. Exploring cognitive integration of basic science and its effect on diagnostic reasoning in novices.

    PubMed

    Lisk, Kristina; Agur, Anne M R; Woods, Nicole N

    2016-06-01

    Integration of basic and clinical science knowledge is increasingly being recognized as important for practice in the health professions. The concept of 'cognitive integration' places emphasis on the value of basic science in providing critical connections to clinical signs and symptoms while accounting for the fact that clinicians may not spontaneously articulate their use of basic science knowledge in clinical reasoning. In this study we used a diagnostic justification test to explore the impact of integrated basic science instruction on novices' diagnostic reasoning process. Participants were allocated to an integrated basic science or clinical science training group. The integrated basic science group was taught the clinical features along with the underlying causal mechanisms of four musculoskeletal pathologies while the clinical science group was taught only the clinical features. Participants completed a diagnostic accuracy test immediately after initial learning, and one week later a diagnostic accuracy and justification test. The results showed that novices who learned the integrated causal mechanisms had superior diagnostic accuracy and better understanding of the relative importance of key clinical features. These findings further our understanding of cognitive integration by providing evidence of the specific changes in clinical reasoning when basic and clinical sciences are integrated during learning.

  19. Energy absorption buildup factors of human organs and tissues at energies and penetration depths relevant for radiotherapy and diagnostics

    PubMed Central

    Hanagodimath, S. M.; Gerward, L.

    2011-01-01

    Energy absorption geometric progression (GP) fitting parameters and the corresponding buildup factors have been computed for human organs and tissues, such as adipose tissue, blood (whole), cortical bone, brain (grey/white matter), breast tissue, eye lens, lung tissue, skeletal muscle, ovary, testis, soft tissue, and soft tissue (4‐component), for the photon energy range 0.015–15 MeV and for penetration depths up to 40 mfp (mean free path). The chemical composition of human organs and tissues is seen to influence the energy absorption buildup factors. It is also found that the buildup factor of human organs and tissues changes significantly with the change of incident photon energy and effective atomic number, Zeff. These changes are due to the dominance of different photon interaction processes in different energy regions and different chemical compositions of human organs and tissues. With the proper knowledge of buildup factors of human organs and tissues, energy absorption in the human body can be carefully controlled. The present results will help in estimating safe dose levels for radiotherapy patients and also useful in diagnostics and dosimetry. The tissue‐equivalent materials for skeletal muscle, adipose tissue, cortical bone, and lung tissue are also discussed. It is observed that water and MS20 are good tissue equivalent materials for skeletal muscle in the extended energy range. PACS numbers: 32.80‐t, 87.53‐j, 78.70‐g, 78.70‐Ck PMID:22089011

  20. Combining functional and structural tests improves the diagnostic accuracy of relevance vector machine classifiers

    PubMed Central

    Racette, Lyne; Chiou, Christine Y.; Hao, Jiucang; Bowd, Christopher; Goldbaum, Michael H.; Zangwill, Linda M.; Lee, Te-Won; Weinreb, Robert N.; Sample, Pamela A.

    2009-01-01

    Purpose To investigate whether combining optic disc topography and short-wavelength automated perimetry (SWAP) data improves the diagnostic accuracy of relevance vector machine (RVM) classifiers for detecting glaucomatous eyes compared to using each test alone. Methods One eye of 144 glaucoma patients and 68 healthy controls from the Diagnostic Innovations in Glaucoma Study were included. RVM were trained and tested with cross-validation on optimized (backward elimination) SWAP features (thresholds plus age; pattern deviation (PD); total deviation (TD)) and on Heidelberg Retina Tomograph II (HRT) optic disc topography features, independently and in combination. RVM performance was also compared to two HRT linear discriminant functions (LDF) and to SWAP mean deviation (MD) and pattern standard deviation (PSD). Classifier performance was measured by the area under the receiver operating characteristic curves (AUROCs) generated for each feature set and by the sensitivities at set specificities of 75%, 90% and 96%. Results RVM trained on combined HRT and SWAP thresholds plus age had significantly higher AUROC (0.93) than RVM trained on HRT (0.88) and SWAP (0.76) alone. AUROCs for the SWAP global indices (MD: 0.68; PSD: 0.72) offered no advantage over SWAP thresholds plus age, while the LDF AUROCs were significantly lower than RVM trained on the combined SWAP and HRT feature set and on HRT alone feature set. Conclusions Training RVM on combined optimized HRT and SWAP data improved diagnostic accuracy compared to training on SWAP and HRT parameters alone. Future research may identify other combinations of tests and classifiers that can also improve diagnostic accuracy. PMID:19528827

  1. Raman spectral feature selection using ant colony optimization for breast cancer diagnosis.

    PubMed

    Fallahzadeh, Omid; Dehghani-Bidgoli, Zohreh; Assarian, Mohammad

    2018-06-04

    Pathology as a common diagnostic test of cancer is an invasive, time-consuming, and partially subjective method. Therefore, optical techniques, especially Raman spectroscopy, have attracted the attention of cancer diagnosis researchers. However, as Raman spectra contain numerous peaks involved in molecular bounds of the sample, finding the best features related to cancerous changes can improve the accuracy of diagnosis in this method. The present research attempted to improve the power of Raman-based cancer diagnosis by finding the best Raman features using the ACO algorithm. In the present research, 49 spectra were measured from normal, benign, and cancerous breast tissue samples using a 785-nm micro-Raman system. After preprocessing for removal of noise and background fluorescence, the intensity of 12 important Raman bands of the biological samples was extracted as features of each spectrum. Then, the ACO algorithm was applied to find the optimum features for diagnosis. As the results demonstrated, by selecting five features, the classification accuracy of the normal, benign, and cancerous groups increased by 14% and reached 87.7%. ACO feature selection can improve the diagnostic accuracy of Raman-based diagnostic models. In the present study, features corresponding to ν(C-C) αhelix proline, valine (910-940), νs(C-C) skeletal lipids (1110-1130), and δ(CH2)/δ(CH3) proteins (1445-1460) were selected as the best features in cancer diagnosis.

  2. Intraband magneto-optical absorption in InAs/GaAs quantum dots: Orbital Zeeman splitting and the Thomas-Reiche-Kuhn sum rule

    NASA Astrophysics Data System (ADS)

    Zhang, J.-Z.; Galbraith, I.

    2008-05-01

    Using perturbation theory, intraband magneto-optical absorption is calculated for InAs/GaAs truncated pyramidal quantum dots in a magnetic field applied parallel to the growth direction z . The effects of the magnetic field on the electronic states as well as the intraband transitions are systematically studied. Selection rules governing the intraband transitions are discussed based on the symmetry properties of the electronic states. While the broadband z -polarized absorption is almost insensitive to the magnetic field, the orbital Zeeman splitting is the dominant feature in the in-plane polarized spectrum. Strong in-plane polarized magneto-absorption features are located in the far-infrared region, while z -polarized absorption occurs at higher frequencies. This is due to the dot geometry (the base length is much larger than the height) yielding different quantum confinement in the vertical and lateral directions. The Thomas-Reiche-Kuhn sum rule, including the magnetic field effect, is applied together with the selection rules to the absorption spectra. The orbital Zeeman splitting depends on both the dot size and the confining potential—the splitting decreases as the dot size or the confining potential decreases. Our calculated Zeeman splittings are in agreement with experimental data.

  3. Matched-filtering line search methods applied to Suzaku data

    NASA Astrophysics Data System (ADS)

    Miyazaki, Naoto; Yamada, Shin'ya; Enoto, Teruaki; Axelsson, Magnus; Ohashi, Takaya

    2016-12-01

    A detailed search for emission and absorption lines and an assessment of their upper limits are performed for Suzaku data. The method utilizes a matched-filtering approach to maximize the signal-to-noise ratio for a given energy resolution, which could be applicable to many types of line search. We first applied it to well-known active galactic nuclei spectra that have been reported to have ultra-fast outflows, and find that our results are consistent with previous findings at the ˜3σ level. We proceeded to search for emission and absorption features in two bright magnetars 4U 0142+61 and 1RXS J1708-4009, applying the filtering method to Suzaku data. We found that neither source showed any significant indication of line features, even using long-term Suzaku observations or dividing their spectra into spin phases. The upper limits on the equivalent width of emission/absorption lines are constrained to be a few eV at ˜1 keV and a few hundreds of eV at ˜10 keV. This strengthens previous reports that persistently bright magnetars do not show proton cyclotron absorption features in soft X-rays and, even if they exist, they would be broadened or much weaker than below the detection limit of X-ray CCD.

  4. Gastrointestinal bioavailability of 2.0 nm diameter gold nanoparticles.

    PubMed

    Smith, Candice A; Simpson, Carrie A; Kim, Ganghyeok; Carter, Carly J; Feldheim, Daniel L

    2013-05-28

    The use of gold nanoparticles as imaging agents and therapeutic delivery systems is growing rapidly. However, a significant limitation of gold nanoparticles currently is their low absorption efficiencies in the gastrointestinal (GI) tract following oral administration. In an attempt to identify ligands that facilitate gold nanoparticle absorption in the GI tract, we have studied the oral bioavailability of 2.0 nm diameter gold nanoparticles modified with the small molecules p-mercaptobenzoic acid and glutathione, and polyethylene glycols (PEG) of different lengths and charge (neutral and anionic). We show that GI absorption of gold nanoparticles modified with the small molecules tested was undetectable. However, the absorption of PEGs depended upon PEG length, with the shortest PEG studied yielding gold nanoparticle absorptions that are orders-of-magnitude larger than observed previously. As the oral route is the most convenient one for administering drugs and diagnostic reagents, these results suggest that short-chain PEGs may be useful in the design of gold nanoparticles for the diagnosis and treatment of disease.

  5. Biomedical visual data analysis to build an intelligent diagnostic decision support system in medical genetics.

    PubMed

    Kuru, Kaya; Niranjan, Mahesan; Tunca, Yusuf; Osvank, Erhan; Azim, Tayyaba

    2014-10-01

    In general, medical geneticists aim to pre-diagnose underlying syndromes based on facial features before performing cytological or molecular analyses where a genotype-phenotype interrelation is possible. However, determining correct genotype-phenotype interrelationships among many syndromes is tedious and labor-intensive, especially for extremely rare syndromes. Thus, a computer-aided system for pre-diagnosis can facilitate effective and efficient decision support, particularly when few similar cases are available, or in remote rural districts where diagnostic knowledge of syndromes is not readily available. The proposed methodology, visual diagnostic decision support system (visual diagnostic DSS), employs machine learning (ML) algorithms and digital image processing techniques in a hybrid approach for automated diagnosis in medical genetics. This approach uses facial features in reference images of disorders to identify visual genotype-phenotype interrelationships. Our statistical method describes facial image data as principal component features and diagnoses syndromes using these features. The proposed system was trained using a real dataset of previously published face images of subjects with syndromes, which provided accurate diagnostic information. The method was tested using a leave-one-out cross-validation scheme with 15 different syndromes, each of comprised 5-9 cases, i.e., 92 cases in total. An accuracy rate of 83% was achieved using this automated diagnosis technique, which was statistically significant (p<0.01). Furthermore, the sensitivity and specificity values were 0.857 and 0.870, respectively. Our results show that the accurate classification of syndromes is feasible using ML techniques. Thus, a large number of syndromes with characteristic facial anomaly patterns could be diagnosed with similar diagnostic DSSs to that described in the present study, i.e., visual diagnostic DSS, thereby demonstrating the benefits of using hybrid image processing and ML-based computer-aided diagnostics for identifying facial phenotypes. Copyright © 2014. Published by Elsevier B.V.

  6. Testing the Prediction of Iron Alteration Minerals on Low Albedo Asteroids

    NASA Technical Reports Server (NTRS)

    Jarvis, K. S.; Vilas, Faith; Howell, E.; Kelley, M.; Cochran, A.

    1999-01-01

    Absorption features centered near 0.60 - 0.65 and 0.80 - 0.90 micron were identified in the spectra of three low-albedo main-belt (165, 368, 877) and two low-albedo outer-belt (225, 334) asteroids (Vilas et al., Icarus, v. 109,274,1994). The absorption features were attributed to charge transfer transitions in iron alteration minerals such as goethite, hematite, and jarosite, all products of aqueous alteration. Concurrently, Jarvis et al. (LPSC XXIV, 715, 1993) presented additional spectra of low-albedo asteroids that had absorption features centered near 0.60 - 0.65 micron without the longer wavelength feature. Since these two features in iron oxides originate from the same ground state, and the longer wavelength feature requires less energy to exist, the single shorter wavelength feature cannot be caused by the iron alteration minerals. In addition, spectra of minerals such as hematite and goethite show a rapid increase in reflectance beginning near 0.5 micron absent in the low-albedo asteroid spectra. The absence of this rise has been attributed to its suppresion from opaques in the surface material. Spectra on more than one night were available for only one of these five asteroids, 225 Henrietta, and showed good repeatability of the 0.65-micron feature. We have acquired additional spectra of all five asteroids in order to test the repeatability of the 0.65-micron feature, and the presence and repeatability of the features centered near 0.8 - 0.9 micron. We specifically will test the possibility that longer wavelength features could be caused by incomplete removal of telluric water. Asteroid 877 Walkure is a member of the Nysa-Hertha family, and will be compared to spectra of other members of that family. Data were acquired in 1996 and 1999 on the 2.1-m telescope with a facility cassegrain spectrograph, McDonald Observatory, Univ. Of Texas, and the 1.5-m telescope with facility cassegrain spectrograph at CTIO. This research is supported by the NASA Planetary Astronomy Program.

  7. Near-infrared spectroscopy of the proto-planetary nebula CRL 618 and the origin of the hydrocarbon dust component in the interstellar medium.

    PubMed

    Chiar, J E; Pendleton, Y J; Geballe, T R; Tielens, A G

    1998-11-01

    A new 2.8-3.8 micrometers spectrum of the carbon-rich protoplanetary nebula CRL 618 confirms the previous detection of a circumstellar 3.4 micrometers absorption feature in this object (Lequeux & Jourdain de Muizon). The high resolution and high signal-to-noise ratio of our spectrum allow us to derive the detailed profile of this absorption feature, which is very similar to that observed in the spectrum of the Galactic center and also resembles the strong 3.4 micrometers emission feature in some post-asymptotic giant branch stars. A weak 3.3 micrometers unidentified infrared band, marginally detected in the CRL 618 spectrum of Lequeux & Jourdain de Muizon, is present in our spectrum. The existence of the 3.4 micrometers feature implies the presence of relatively short-chained, aliphatic hydrocarbon materials (-CH2-/-CH3 approximately = 2-2.5) in the circumstellar environment around CRL 618. It also implies that the carriers of the interstellar 3.4 micrometers feature are produced at least in part in circumstellar material, and it calls into question whether any are produced by the processing of interstellar ices in dense interstellar clouds, as has been previously proposed. Other features in the spectrum are recombination lines of hydrogen, rotational and vibration-rotation lines of molecular hydrogen, and a broad absorption probably due to a blend of HCN and C2H2 bands.

  8. Near-infrared spectroscopy of the proto-planetary nebula CRL 618 and the origin of the hydrocarbon dust component in the interstellar medium

    NASA Technical Reports Server (NTRS)

    Chiar, J. E.; Pendleton, Y. J.; Geballe, T. R.; Tielens, A. G.

    1998-01-01

    A new 2.8-3.8 micrometers spectrum of the carbon-rich protoplanetary nebula CRL 618 confirms the previous detection of a circumstellar 3.4 micrometers absorption feature in this object (Lequeux & Jourdain de Muizon). The high resolution and high signal-to-noise ratio of our spectrum allow us to derive the detailed profile of this absorption feature, which is very similar to that observed in the spectrum of the Galactic center and also resembles the strong 3.4 micrometers emission feature in some post-asymptotic giant branch stars. A weak 3.3 micrometers unidentified infrared band, marginally detected in the CRL 618 spectrum of Lequeux & Jourdain de Muizon, is present in our spectrum. The existence of the 3.4 micrometers feature implies the presence of relatively short-chained, aliphatic hydrocarbon materials (-CH2-/-CH3 approximately = 2-2.5) in the circumstellar environment around CRL 618. It also implies that the carriers of the interstellar 3.4 micrometers feature are produced at least in part in circumstellar material, and it calls into question whether any are produced by the processing of interstellar ices in dense interstellar clouds, as has been previously proposed. Other features in the spectrum are recombination lines of hydrogen, rotational and vibration-rotation lines of molecular hydrogen, and a broad absorption probably due to a blend of HCN and C2H2 bands.

  9. Unified analysis of optical absorption spectra of carotenoids based on a stochastic model.

    PubMed

    Uragami, Chiasa; Saito, Keisuke; Yoshizawa, Masayuki; Molnár, Péter; Hashimoto, Hideki

    2018-05-03

    The chemical structures of the carotenoid molecules are very simple and one might think that the electronic feature of it is easily predicted. However, it still has so much unknown information except the correlation between the electronic energy state and the length of effective conjugation chain of carotenoids. To investigate the electronic feature of the carotenoids, the most essential method is measuring the optical absorption spectra, but simulating it from the resonance Raman spectra is also the effective way. From this reason, we studied the optical absorption spectra as well as resonance Raman spectra of 15 different kinds of cyclic carotenoid molecules, recorded in tetrahydrofuran (THF) solutions at room temperature. The whole band shapes of the absorption spectra of all these carotenoid molecules were successfully simulated based on a stochastic model using Brownian oscillators. The parameters obtained from the simulation made it possible to discuss the intermolecular interaction between carotenoids and solvent THF molecules quantitatively. Copyright © 2018. Published by Elsevier Inc.

  10. DOE Office of Scientific and Technical Information (OSTI.GOV)

    Honda, M.; Kudo, T.; Terada, H.

    We made near-infrared multicolor imaging observations of a disk around Herbig Be star HD 100546 using Gemini/NICI. K (2.2 μm), H{sub 2}O ice (3.06 μm), and L′ (3.8 μm) disk images were obtained and we found a 3.1 μm absorption feature in the scattered light spectrum, likely due to water ice grains at the disk surface. We compared the observed depth of the ice absorption feature with the disk model based on Oka et al., including the water ice photodesorption effect by stellar UV photons. The observed absorption depth can be explained by both the disk models with and without themore » photodesorption effect within the measurement accuracy, but the model with photodesorption effects is slightly more favored, implying that the UV photons play an important role in the survival/destruction of ice grains at the Herbig Ae/Be disk surface. Further improvement to the accuracy of the observations of the water ice absorption depth is needed to constrain the disk models.« less

  11. FIRST ULTRAVIOLET REFLECTANCE SPECTRA OF PLUTO AND CHARON BY THE HUBBLE SPACE TELESCOPE COSMIC ORIGINS SPECTROGRAPH: DETECTION OF ABSORPTION FEATURES AND EVIDENCE FOR TEMPORAL CHANGE

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Stern, S. A.; Spencer, J. R.; Shinn, A.

    We have observed the mid-UV spectra of both Pluto and its large satellite, Charon, at two rotational epochs using the Hubble Space Telescope (HST) Cosmic Origins Spectrograph (COS) in 2010. These are the first HST/COS measurements of Pluto and Charon. Here we describe the observations and our reduction of them, and present the albedo spectra, average mid-UV albedos, and albedo slopes we derive from these data. These data reveal evidence for a strong absorption feature in the mid-UV spectrum of Pluto; evidence for temporal change in Pluto's spectrum since the 1990s is reported, and indirect evidence for a near-UV spectralmore » absorption on Charon is also reported.« less

  12. The Detection of Water Ice in Comet Hale-Bopp

    NASA Technical Reports Server (NTRS)

    Davies, John K.; Roush, Ted L.; Cruikshank, Dale P.; Bartholomew, Mary Jane; Geballe, Thomas R.; Owen, Tobias

    1996-01-01

    We present spectra of Comet Hale-Bopp (C/1995 01) covering the range 1.4-2.5 micron that were recorded when the comet was 7 AU from the Sun. These show I)road absorption features at 1.5 and 2.05 micron. We show that some, but not all, of this absorption could be matched by an intimate mixture of water ice and a low albedo material such as carbon on the nucleus. However, we recognize that it is more likely that the ice features are produced by scattering from icy grains in the coma. The absence of absorption at 1.65 micron suggests that this ice is probably in the amorphous state. An unidentified additional component may be required to account for the downward slope at the longwavelength end of the spectrum.

  13. Prevalence of neuropathic features of back pain in clinical populations: implications for the diagnostic triage paradigm.

    PubMed

    Hush, Julia M; Marcuzzi, Anna

    2012-07-01

    SUMMARY Contemporary clinical assessment of back pain is based on the diagnostic triage paradigm. The most common diagnostic classification is nonspecific back pain, considered to be of nociceptive etiology. A small proportion are diagnosed with radicular pain, of neuropathic origin. In this study we review the body of literature on the prevalence of neuropathic features of back pain, revealing that the point prevalence is 17% in primary care, 34% in mixed clinical settings and 53% in tertiary care. There is evidence that neuropathic features of back pain are not restricted to typical clinical radicular pain phenotypes and may be under-recognized, particularly in primary care. The consequence of this is that in the clinic, diagnostic triage may erroneously classify patients with nonspecific back pain or radicular pain. A promising alternative is the development of mechanism-based pain phenotyping in patients with back pain. Timely identification of contributory pain mechanisms may enable greater opportunity to select appropriate therapeutic targets and improve patient outcomes.

  14. Rapidly variable relatvistic absorption

    NASA Astrophysics Data System (ADS)

    Parker, M.; Pinto, C.; Fabian, A.; Lohfink, A.; Buisson, D.; Alston, W.; Jiang, J.

    2017-10-01

    I will present results from the 1.5Ms XMM-Newton observing campaign on the most X-ray variable AGN, IRAS 13224-3809. We find a series of nine absorption lines with a velocity of 0.24c from an ultra-fast outflow. For the first time, we are able to see extremely rapid variability of the UFO features, and can link this to the X-ray variability from the inner accretion disk. We find a clear flux dependence of the outflow features, suggesting that the wind is ionized by increasing X-ray emission.

  15. Long-range, noncoherent laser Doppler velocimeter.

    PubMed

    Bloom, S H; Kremer, R; Searcy, P A; Rivers, M; Menders, J; Korevaar, E

    1991-11-15

    An experimental demonstration of a long-range, noncoherent laser Doppler velocimeter (LDV) is presented. The LDV detects incoming Doppler-shifted signal photons by using the sharp spectral absorption features in atomic or molecular vapors. The edge of the absorption feature is used to convert changes in frequency to large changes in transmission. Preliminary measurements of wind velocity using seeded aerosols showed that the LDV results agreed with mechanical anemometer measurements to within the accuracy of the LDV measurements. With optimization the LDV will provide accurate range-resolved and vibration-tolerant wind-speed measurements at large distances.

  16. USGS Digital Spectral Library splib06a

    USGS Publications Warehouse

    Clark, Roger N.; Swayze, Gregg A.; Wise, Richard A.; Livo, K. Eric; Hoefen, Todd M.; Kokaly, Raymond F.; Sutley, Stephen J.

    2007-01-01

    Introduction We have assembled a digital reflectance spectral library that covers the wavelength range from the ultraviolet to far infrared along with sample documentation. The library includes samples of minerals, rocks, soils, physically constructed as well as mathematically computed mixtures, plants, vegetation communities, microorganisms, and man-made materials. The samples and spectra collected were assembled for the purpose of using spectral features for the remote detection of these and similar materials. Analysis of spectroscopic data from laboratory, aircraft, and spacecraft instrumentation requires a knowledge base. The spectral library discussed here forms a knowledge base for the spectroscopy of minerals and related materials of importance to a variety of research programs being conducted at the U.S. Geological Survey. Much of this library grew out of the need for spectra to support imaging spectroscopy studies of the Earth and planets. Imaging spectrometers, such as the National Aeronautics and Space Administration (NASA) Airborne Visible/Infra Red Imaging Spectrometer (AVIRIS) or the NASA Cassini Visual and Infrared Mapping Spectrometer (VIMS) which is currently orbiting Saturn, have narrow bandwidths in many contiguous spectral channels that permit accurate definition of absorption features in spectra from a variety of materials. Identification of materials from such data requires a comprehensive spectral library of minerals, vegetation, man-made materials, and other subjects in the scene. Our research involves the use of the spectral library to identify the components in a spectrum of an unknown. Therefore, the quality of the library must be very good. However, the quality required in a spectral library to successfully perform an investigation depends on the scientific questions to be answered and the type of algorithms to be used. For example, to map a mineral using imaging spectroscopy and the mapping algorithm of Clark and others (1990a, 2003b), one simply needs a diagnostic absorption band. The mapping system uses continuum-removed reference spectral features fitted to features in observed spectra. Spectral features for such algorithms can be obtained from a spectrum of a sample containing large amounts of contaminants, including those that add other spectral features, as long as the shape of the diagnostic feature of interest is not modified. If, however, the data are needed for radiative transfer models to derive mineral abundances from reflectance spectra, then completely uncontaminated spectra are required. This library contains spectra that span a range of quality, with purity indicators to flag spectra for (or against) particular uses. Acquiring spectral measurements and performing sample characterizations for this library has taken about 15 person-years of effort. Software to manage the library and provide scientific analysis capability is provided (Clark, 1980, 1993). A personal computer (PC) reader for the library is also available (Livo and others, 1993). The program reads specpr binary files (Clark, 1980, 1993) and plots spectra. Another program that reads the specpr format is written in IDL (Kokaly, 2005). In our view, an ideal spectral library consists of samples covering a very wide range of materials, has large wavelength range with very high precision, and has enough sample analyses and documentation to establish the quality of the spectra. Time and available resources limit what can be achieved. Ideally, for each mineral, the sample analysis would include X-ray diffraction (XRD), electron microprobe (EM) or X-ray fluorescence (XRF), and petrographic microscopic analyses. For some minerals, such as iron oxides, additional analyses such as Mossbauer would be helpful. We have found that to make the basic spectral measurements, provide XRD, EM or XRF analyses, and microscopic analyses, document the results, and complete an entry of one spectral library sample, all takes about

  17. How to Use the DX SYSTEM of Diagnostic Testing. Methodology Project.

    ERIC Educational Resources Information Center

    McArthur, David; Cabello, Beverly

    The DX SYSTEM of Diagnostic Testing is an easy-to-use computerized system for developing and administering diagnostic tests. A diagnostic test measures a student's mastery of a specific domain (skill or content area). It examines the necessary subskills hierarchically from the most to the least complex. The DX SYSTEM features tailored testing with…

  18. Physical properties of erupting plasma associated with coronal mass ejections

    NASA Astrophysics Data System (ADS)

    Lee, J.; Raymond, J. C.; Reeves, K. K.; Moon, Y.; Kim, K.

    2013-12-01

    We investigate the physical properties (temperature, density, and mass) of erupting plasma observed in X-rays and EUV, which are all associated with coronal mass ejections observed by SOHO/LASCO. The erupting plasmas are observed as absorption or emission features in the low corona. The absorption feature provides a lower limit to the cold mass while the emission feature provides an upper limit to the mass of observed plasma in X-ray and EUV. We compare the mass constraints for each temperature response and find that the mass estimates in EUV and XRT are smaller than the total mass in the coronagraph. Several events were observed by a few passbands in the X-rays, which allows us to determine the temperature of the eruptive plasma using a filter ratio method. The temperature of one event is estimated at about 8.6 MK near the top of the erupting plasma. This measurement is possibly an average temperature for higher temperature plasma because the XRT is more sensitive at higher temperatures. In addition, a few events show that the absorption features of a prominence or a loop change to emission features with the beginning of their eruptions in all EUV wavelengths of SDO/AIA, which indicates the heating of the plasma. By estimating the physical properties of the erupting plasmas, we discuss the heating of the plasmas associated with coronal mass ejections in the low corona.

  19. Search for correlated UV and x ray absorption of NGC 3516

    NASA Technical Reports Server (NTRS)

    Martin, Christopher; Halpern, Jules P.; Kolman, Michiel

    1991-01-01

    NGC 3516, a low-luminosity Seyfert galaxy, is one of a small fraction of Seyfert galaxies that exhibit broad absorption in a resonance line. In order to determine whether the UV and x ray absorption in NGC 3516 are related, 5 IUE observations were obtained, quasi-simultaneously with 4 Ginga observations. The results are presented and discussed. The following subject areas are covered: short-term UV variability; emission lines; galactic absorption lines; the C IV, N V, and Si IV absorption features; lower limit on the carbon column density; estimate of the distance from the absorber to the continuum source; variability in the continuum and absorption; a comparison with BAL QSO's; and the x ray-UV connection.

  20. What is controlling the reflectance spectra (0.35-150 μm) of hydrated (and dehydrated) carbonaceous chondrites?

    NASA Astrophysics Data System (ADS)

    Beck, Pierre; Maturilli, A.; Garenne, A.; Vernazza, P.; Helbert, J.; Quirico, E.; Schmitt, B.

    2018-10-01

    In order to determine the controls on the reflectance spectra of hydrated carbonaceous chondrites, reflectance spectra were measured for a series of samples with well-determined mineralogy, water-content, and thermal history. This includes 5 CR chondrites, 11 CM chondrites, and 7 thermally metamorphosed CM chondrites. These samples were characterized over the 0.35-150 μm range by reflectance spectroscopy in order to cover the full spectral range accessible from ground based observation, and that will be determined in the near-future by the Hayabusa-2 and Osiris-REx missions. While spectra show absorption features shortward of 35 μm, no strong absorption bands were identified in this suite of samples longward of 35 μm. This work shows that the 0.7-μm band observed in hydrated carbonaceous chondrites is correlated with the total water content as well as with the band depth at 2.7 μm, confirming the suggestion that they are related to Mg-rich, Fe-bearing phyllosilicates. A feature at 2.3 μm, diagnostic of such phyllosilicates was found for all samples with a detectable 0.7-μm band, also indicative of Mg-rich phyllosilicates. A strong variability is found in the shape of the 3-μm band among CM chondrites, and between CM, CR and thermally metamorphosed CM chondrites. Heavily altered CM chondrites show a single strong band around 2.72 μm while more thermally metamorphosed CM samples show an absorption band at higher wavelength. The CR chondrite GRO 95577 has a 3-μm feature very similar to those of extensively altered CM chondrites while other CR chondrite rather shows goethite-like signatures (possibly due to terrestrial weathering of metals). Thermally metamorphosed CM chondrites all have 3-μm features, which are not purely due to terrestrial adsorbed water. The band shape ranges from heavily altered CM-like to goethite-like. The overall reflectance was found to be significantly higher for CR chondrites than for CM chondrites. This is also true for the hydrated CR chondrite GRO 95577 whose reflectance spectrum is almost identical to spectra obtained for CM chondrites except that it is brighter by about 40% in the visible. Another possibility to distinguish hydrated CM from hydrated CR chondrites is to use the combination of band depths at 0.7 and 2.3 μm. When comparing the spectra obtained with Cg and Cgh spectral end member, it is found that the band depth determined for hydrated chondrites (0.7 and 2.3 μm) are always higher than calculated for these spectral endmembers. If one considers only asteroids with unambiguous hydration detection, band depth at 0.7 μm is of similar value to those measured for hydrated carbonaceous chondrites.

  1. Tissue phantom-based breast cancer detection using continuous near-infrared sensor

    PubMed Central

    Liu, Dan; Liu, Xin; Zhang, Yan; Wang, Qisong; Lu, Jingyang

    2016-01-01

    ABSTRACT Women's health is seriously threatened by breast cancer. Taking advantage of efficient diagnostic instruments to identify the disease is very meaningful in prolonging life. As a cheap noninvasive radiation-free technology, Near-infrared Spectroscopy is suitable for general breast cancer examination. A discrimination method of breast cancer is presented using the deference between absorption coefficients and applied to construct a blood oxygen detection device based on Modified Lambert-Beer theory. Combined with multi-wavelength multi-path near-infrared sensing technology, the proposed method can quantitatively distinguish the normal breast from the abnormal one by measuring the absorption coefficients of breast tissue and the blood oxygen saturation. An objective judgment about the breast tumor is made according to its high absorption of near-infrared light. The phantom experiment is implemented to show the presented method is able to recognize the absorption differences between phantoms and demonstrates its feasibility in the breast tumor detection. PMID:27459672

  2. Tissue phantom-based breast cancer detection using continuous near-infrared sensor.

    PubMed

    Liu, Dan; Liu, Xin; Zhang, Yan; Wang, Qisong; Lu, Jingyang

    2016-09-02

    Women's health is seriously threatened by breast cancer. Taking advantage of efficient diagnostic instruments to identify the disease is very meaningful in prolonging life. As a cheap noninvasive radiation-free technology, Near-infrared Spectroscopy is suitable for general breast cancer examination. A discrimination method of breast cancer is presented using the deference between absorption coefficients and applied to construct a blood oxygen detection device based on Modified Lambert-Beer theory. Combined with multi-wavelength multi-path near-infrared sensing technology, the proposed method can quantitatively distinguish the normal breast from the abnormal one by measuring the absorption coefficients of breast tissue and the blood oxygen saturation. An objective judgment about the breast tumor is made according to its high absorption of near-infrared light. The phantom experiment is implemented to show the presented method is able to recognize the absorption differences between phantoms and demonstrates its feasibility in the breast tumor detection.

  3. Ovarian torsion: diagnostic features on CT and MRI with pathologic correlation.

    PubMed

    Duigenan, Shauna; Oliva, Esther; Lee, Susanna I

    2012-02-01

    The CT and MRI features of ovarian torsion are illustrated with gross pathologic correlation. Ovarian enlargement with or without an underlying mass is the finding most frequently associated with torsion, but it is nonspecific. A twisted pedicle, although not often detected on imaging, is pathognomonic when seen. Subacute ovarian hemorrhage and abnormal enhancement is usually seen, and both features show characteristic patterns on CT and MRI. Ipsilateral uterine deviation can also be seen. Diagnostic pitfalls that may mimic ovarian torsion and observations for discriminating them are discussed.

  4. Time-varying sodium absorption in the Type Ia supernova 2013gh

    DOE PAGES

    Ferretti, Raphael; Amanullah, R.; Goobar, A.; ...

    2016-07-18

    Context. Temporal variability of narrow absorption lines in high-resolution spectra of Type Ia supernovae (SNe Ia) is studied to search for circumstellar matter. Time series which resolve the profiles of absorption lines such as Na I D or Ca II H&K are expected to reveal variations due to photoionisation and subsequent recombination of the gases. The presence, composition, and geometry of circumstellar matter may hint at the elusive progenitor system of SNe Ia and could also affect the observed reddening law. Aims. To date, there are few known cases of time-varying Na I D absorption in SNe Ia, all ofmore » which occurred during relatively late phases of the supernova (SN) evolution. Photoionisation, however, is predicted to occur during the early phases of SNe Ia, when the supernovae peak in the ultraviolet. We attempt, therefore, to observe early-time absorption-line variations by obtaining high-resolution spectra of SNe before maximum light. Methods. In this paper, we have obtained photometry and high-resolution spectroscopy of SNe Ia 2013gh and iPTF 13dge, to search for absorption-line variations. Furthermore, we study interstellar absorption features in relation to the observed photometric colours of the SNe. Results. Both SNe display deep Na I D and Ca II H&K absorption features. Furthermore, small but significant variations are detected in a feature of the Na I D profile of SN 2013gh. The variations are consistent with either geometric effects of rapidly moving or patchy gas clouds or photoionisation of Na I gas at R ≈ 10 19 cm from the explosion. Conclusions. Our analysis indicates that it is necessary to focus on early phases to detect photoionisation effects of gases in the circumstellar medium of SNe Ia. Different absorbers such as Na I and Ca II can be used to probe for matter at different distances from the SNe. Finally, the nondetection of variations during early phases makes it possible to put limits on the abundance of the species at those distances.« less

  5. Development of a Near-Ir Cavity Enhanced Absorption Spectrometer for the Detection of Atmospheric Oxidation Products and Organoamines

    NASA Astrophysics Data System (ADS)

    Eddingsaas, Nathan C.; Jewell, Breanna; Thurnherr, Emily

    2014-06-01

    An estimated 10,000 to 100,000 different compounds have been measured in the atmosphere, each one undergoes many oxidation reactions that may or may not degrade air quality. To date, the fate of even some of the most abundant hydrocarbons in the atmosphere is poorly understood. One difficulty is the detection of atmospheric oxidation products that are very labile and decompose during analysis. To study labile species under atmospheric conditions, a highly sensitive, non-destructive technique is needed. Here we describe a near-IR incoherent broadband cavity enhanced absorption spectroscopy (IBBCEAS) setup that we are developing to meet this end. We have chosen to utilize the near-IR, where vibrational overtone absorptions are observed, due to the clean spectral windows and better spectral separation of absorption features. In one spectral window we can simultaneously and continuously monitor the composition of alcohols, hydroperoxides, and carboxylic acids in an air mass. In addition, we have used our CEAS setup to detect organoamines. The long effective path length of CEAS allows for low detection limits, even of the overtone absorption features, at ppb and ppt levels.

  6. UV Reflectance of Jupiter's Moon Europa and Asteroid (16) Psyche

    NASA Astrophysics Data System (ADS)

    Becker, T. M.; Retherford, K. D.; Roth, L.; Hendrix, A.; McGrath, M. A.; Cunningham, N.; Feaga, L. M.; Saur, J.; Elkins-Tanton, L. T.; Walhund, J. E.; Molyneux, P.

    2017-12-01

    Surface reflectance observations of solar system objects in the UV are not only complimentary to longer wavelength observations for identifying surface composition, but can also reveal new and meaningful information about the surfaces of those bodies. On Europa, far-UV (FUV) spectral observations made by the Hubble Space Telescope (HST) show that the surface lacks a strong water ice absorption edge near 165 nm, which is intriguing because such a band has been detected on most icy satellites. This may suggest that radiolytic processing by Jupiter's magnetosphere has altered the surface, causing absorption at wavelengths longward of the H2O edge, masking this feature. Additionally, the FUV spectra are blue (increasing albedo with shorter wavelengths), and regions that are observed to be dark in the visible appear bright in the FUV. This spectral inversion, also observed on the Moon and some asteroids, may provide insight into the properties of the surface material and how they are processed.We also explore the UV reflectance spectra of the main belt asteroid (16) Psyche. This asteroid is believed to be the metallic remnant core of a differentiated asteroid, stripped of its mantle through collisions. However, there is speculation that the asteroid could have formed as-is from highly reduced metal-rich material near the Sun early in the formation of the solar system. Further, spectral observations in the infrared have revealed pyroxene and hydroxyl on the asteroid's surface, complicating the interpretation that (16) Psyche is a pure metallic object. Laboratory studies indicate that there are diagnostic spectral features in the UV that could be useful for determining the surface composition. We obtained HST observations of Psyche from 160 - 300 nm. Preliminary results show a featureless, red-sloped spectrum, inconsistent with significant amounts of pyroxene on the surface. We will present the spectra of Europa and the asteroid (16) Psyche and discuss the unique details unveiled by studies of these objects in the UV.

  7. Toward an understanding of phyllosilicate mineralogy in the outer main asteroid belt

    NASA Astrophysics Data System (ADS)

    Takir, Driss; Emery, Joshua P.; McSween, Harry Y.

    2015-09-01

    Proposed mineralogical linkages between CM/CI carbonaceous chondrites and outer Main Belt asteroids remain uncertain due to a dearth of diagnostic absorptions in visible and near-infrared (∼0.4-2.5 μm) spectra of the two sets of objects. Absorptions near 3 μm in both sets hold promise for illuminating the potential linkages. Spectral comparisons of meteorites and asteroids have been challenging because meteorite spectra have usually been acquired in ambient terrestrial environments, and hence were contaminated by atmospheric water. In this study, we compare near-infrared spectra of chondrites measured in the laboratory under asteroid-like conditions (Takir, D. et al. [2013]. Meteorit. Planet. Sci. 48, 1618-1637) and spectra of asteroids measured with the long-wavelength cross-dispersed (LXD: 1.9-4.2-μm) mode of the SpeX spectrograph/imager at the NASA Infrared Telescope Facility (IRTF) (Takir, D., Emery, J.P. [2012]. Icarus 219, 641-654). Using the 3-μm band shape, we find that spectral Group 2 CM and CI (Ivuna) chondrites are possible meteorite analogs for asteroids with the sharp 3-μm features, which are predominately located in the 2.5 < a < 3.3 AU region. Spectral Group 2 CM chondrites contain phyllosilicate phases intermediate between endmembers Fe-serpentine and Mg-serpentine, with a petrological subtype ranging from 2.2 to 2.1 (Takir, D. et al. [2013]. Meteorit. Planet. Sci. 48, 1618-1637). No meteorite match was found for asteroids showing a rounded 3-μm feature, which tend to be located farther from the Sun (3.0 < a < 4.0 AU), or for asteroids with distinctive spectra like 1 Ceres or 52 Europa. The study of the 3-μm band in meteorites and asteroids has implications for the understanding of phyllosilicate mineralogy and its distribution in the outer Main Belt region.

  8. Laser continuum source atomic absorption spectroscopy: Measuring the ground state with nanosecond resolution in laser-induced plasmas

    NASA Astrophysics Data System (ADS)

    Merten, Jonathan; Johnson, Bruce

    2018-01-01

    A new dual-beam atomic absorption technique is applied to laser-induced plasmas. The technique uses an optical parametric oscillator pseudocontinuum, producing emission that is both wider than the absorption line profile, but narrow enough to allow the use of an echelle spectrograph without order sorting. The dual-beam-in space implementation makes the technique immune to nonspecific attenuation of the probe beam and the structure of the pseudocontinuum. The potential for plasma diagnostics is demonstrated with spatially and temporally resolved measurements of magnesium metastable and lithium ground state optical depths in a laser-induced plasma under reduced pressure conditions. The lithium measurements further demonstrate the technique's potential for isotope ratio measurements.

  9. Novel xenon calibration scheme for two-photon absorption laser induced fluorescence of hydrogen

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Elliott, Drew; Scime, Earl; Short, Zachary, E-mail: zdshort@mix.wvu.edu

    Two photon absorption laser induced fluorescence (TALIF) measurements of neutral hydrogen and its isotopes are typically calibrated by performing TALIF measurements on krypton with the same diagnostic system and using the known ratio of the absorption cross sections [K. Niemi et al., J. Phys. D 34, 2330 (2001)]. Here we present the measurements of a new calibration method based on a ground state xenon scheme for which the fluorescent emission wavelength is nearly identical to that of hydrogen, thereby eliminating chromatic effects in the collection optics and simplifying detector calibration. We determine that the ratio of the TALIF cross sectionsmore » of xenon and hydrogen is 0.024 ± 0.001.« less

  10. Studies of solid carbon dioxide in interstellar ice analogs subject to thermal processing

    NASA Astrophysics Data System (ADS)

    White, Douglas W.

    2010-09-01

    Solid CO2 has been detected in many lines of sight in the interstellar medium from infrared observatories. Spectral profiles from space-based observatories have suggested that CO2 on icy grain mantles is mixed with other common molecules such as H2O and CH 3OH in interstellar regions and that thermal annealing has occurred. The vibrational mode at 658 cm-1 (15.2 mum) is suspected to be a powerful diagnostic tool as to the composition of species on icy grain mantles as well as thermal histories. However, previous studies have not systematically investigated ice composition and temperature. Laboratory spectra of interstellar ice analogs have been created in this study order to better understand the physical properties of solid CO2 in these interstellar environments. Existing databases of ice composition studies and effects of ice thermal history were updated in this study to include a more systematic approach. The 658 cm-1 (15.2 mum) bending mode feature of CO2 is examined here and the subsequent astrophysical implications stated. In the first set of experiments, 47 mixtures of H2O,CH3OH, andCO2 were slowly warmed and mid-infrared absorption spectra were recorded at 5K intervals. The second set of experiments involved examining the CO2 bending mode feature of 10 different CO2-containing ice mixtures at different temperatures where ice segregation was suspected. In these experiments, the ice mixtures were slowly heated to the desired temperature for increasing time intervals before cooling down and recording mid-IR absorption spectra. These studies may be used to analyze IR data from space-based observatories such as the Spitzer Space Telescope Infrared Spectrograph as well other future IR observations of the interstellar medium. Finally, mass spectroscopy measurements were taken from temperature programmed desorption (TPD) experiments performed on several binary mixtures of H2O + CO2 and CH 3OH + CO2. Physical properties such as desorption energy of CO2 can be determined from the TPD traces of these experiments. The work provided here addresses the physical properties of solid CO 2 thermally processed in ice mixtures in interstellar environments by laboratory simulations spectroscopically analyzed by mid-infrared absorption profiles and TPD.

  11. How Rich is Rich? Placing Constraints on the Abundance of Spinel in the Pink Spinel Anorthosite Lithology on the Moon Through Space Weathering

    NASA Technical Reports Server (NTRS)

    Gross, J.; Gillis-Davis, J.; Isaacson, P. J.; Le, L.

    2015-01-01

    previously unknown lunar rock was recently recognized in the Moon Mineralogy Mapper (M(sup 3)) visible to near-infrared (VNIR) reflectance spectra. The rock type is rich in Mg-Al spinel (approximately 30%) and plagioclase and contains less than 5% mafic silicate minerals (olivine and pyroxene). The identification of this pink spinel anorthosite (PSA) at the Moscoviense basin has sparked new interest in lunar spinel. Pieters et al. suggested that these PSA deposits might be an important component of the lunar crust. However, Mg-Al spinel is rare in the Apollo and meteorite sample collections (only up to a few wt%), and occurs mostly in troctolites and troctolitic cataclastites. In this study, we are conducting a series of experiments (petrologic and space weathering) to investigate whether deposits of spinel identified by remote sensing are in high concentration (e.g. 30%) or whether the concentrations of spinel in these deposits are more like lunar samples, which contain only a few wt%. To examine the possibility of an impact-melt origin for PSA, conducted 1-bar crystallization experiments on rock compositions similar to pink spinel troctolite 65785. The VNIR spectral reflectance analyses of the low-temperature experiments yield absorption features similar to those of the PSA lithology detected at Moscoviense Basin. The experimental run products at these temperatures contain approximately 5 wt% spinel, which suggests that the spinel-rich deposits detected by M(sup 3) might not be as spinel-rich as previously thought. However, the effect of space weathering on spinel is unknown and could significantly alter its spectral properties including potential weakening of its diagnostic 2-micrometers absorption feature. Thus, weathered lunar rocks could contain more spinel than a comparison with the unweathered experimental charges would suggest. In this study, we have initiated space weathering experiments on 1) pure pink spinel, 2) spinel-anorthite mixtures, and 3) the low temperature experimental run products from Gross et al. in order to evaluate the influence of space weathering on the absorption strength of spinel. The results can be used to place constraints on the spinel abundance in the PSA lithology and can be used as ground truth for further VNIR spectral analyzes of lunar lithologies.

  12. First results from protective ECRH diagnostics for Wendelstein 7-X

    NASA Astrophysics Data System (ADS)

    Marsen, S.; Corre, Y.; Laqua, H. P.; Moncada, V.; Moseev, D.; Niemann, H.; Preynas, M.; Stange, T.; The W7-X Team

    2017-08-01

    Wendelstein 7-X (W7-X) is a steady state capable optimised stellarator. The main heating system is electron cyclotron resonance heating (ECRH) operating at 140 GHz providing up to 9 MW microwave power. The power is launched into the machine by front steerable quasi-optical launchers in X- or O-mode. While in X-mode the first pass absorption is 99%, it is only 40... 70% in O-mode. O2-mode heating is forseen for high density operation above the X2 cutoff density of 1.2\\centerdot {{10}20} m-3. A set of diagnostics has been developed to protect the machine from non absorbed ECRH power which can easily damage in vessel components. The non absorbed power hitting the inner wall is measured by waveguides embedded in the first wall (ECA diagnostic). In order to prevent the inner wall from overheating or arcing, a near-infra red sensitive video diagnostic with a dynamic range of 450...1200 °C was integrated in the ECRH launchers. Thermal calculations for the carbon tiles predict a temperature increase above the detection threshold for scenarios of plasma start-up failure or poor absorption on a time scale of 50 ms. However, the temperature increase measured by an IR camera in experiments with failed break down, i.e. no ECRH absorption for up to 50 ms, was only Δ T≈ 70{{~}\\circ} C. In discharges with ≈ 5% transmission the measured temperature increase was comparable. The stray radiation level inside the machine is measured by so called sniffer probes resembling microwave diode detectors which were designed to collect all radiation approaching the probing surface independent of incident angle and polarization. Five sniffer probes are installed at different toroidal positions. They were integrated in the ECRH interlock system. During the first operational phase of W7-X this was the only available plasma interlock system. The signal quality proofed to be high enough for a reliable termination in case of poor absorption. After a breakdown phase of 10 ms, the sniffer probe signals dropped by more than an order of magnitude. Especially in the very first days of operation, most discharges died by a radiative collapse due to impurity influx. In this case the heating power was reliably switched off due to the increased level of stray radiation. Moreover, ECRH bolometers with a slower response time in the launcher ports and an empty diagnostic port were used to estimate the stray radiation level in the ports. In the launcher ports it could be shown that the stray radiation could lead to an overheating of the bellows in long discharges. Possible counter measures are discussed.

  13. Can CT imaging features of ground-glass opacity predict invasiveness? A meta-analysis.

    PubMed

    Dai, Jian; Yu, Guoyou; Yu, Jianqiang

    2018-04-01

    A meta-analysis was conducted to investigate the diagnostic performance of computed tomography (CT) imaging features of ground-glass opacity (GGO) to predict invasiveness. Two reviewers independently searched PubMed, Medline, Web of Science, Cochrane Embase and CNKI for relevant studies. CT imaging signs of bubble lucency, speculation, lobulated margin, and pleural indentation were used as diagnostic references to discriminate pre-invasive and invasive disease. The sensitivity, specificity, diagnostic odds ratio (DOR), summary receiver operating characteristic (SROC) curves, and the area under the SROC curve (AUC) were calculated to evaluate diagnostic efficiency. Twelve studies were finally included. Diagnostic performance ranged from 0.41 to 0.52 for sensitivity and 0.56 to 0.63 for specificity. The diagnostic positive and negative likelihood ratios ranged from 1.03 to 2.13 and 0.52 to 1.05, respectively. The DORs of the GGO CT features for discriminating invasive disease ranged from 1.02 to 4.00. The area under the ROC curve was also low, with a range of 0.60 to 0.67 for discriminating pre-invasive and invasive disease. The diagnostic value of a single CT imaging sign of GGO, such as bubble lucency, speculation, lobulated margin, or pleural indentation is limited for discriminating pre-invasive and invasive disease because of low sensitivity, specificity, and AUC. © 2018 The Authors. Thoracic Cancer published by China Lung Oncology Group and John Wiley & Sons Australia, Ltd.

  14. Optical Diagnostics in the Gaseous Electronics Conference Reference Cell

    PubMed Central

    Hebner, G. A.; Greenberg, K. E.

    1995-01-01

    A number of laser-induced fluorescence and absorption spectroscopy studies have been conducted using Gaseous Electronics Conference Reference Cells. Laser-induced fluorescence has been used to measure hydrogen atom densities, to measure argon metastable spatial profiles, to determine the sheath electric field, and to infer the electron density and temperature. Absorption spectroscopy, using lamp sources and diode lasers, has been used to measure metastable atom densities in helium and argon discharges and fluorocarbon densities in silicon etching discharges. The experimental techniques and sample results of these investigations are reviewed. PMID:29151748

  15. Diagnostic standards for dopaminergic augmentation of restless legs syndrome: report from a World Association of Sleep Medicine-International Restless Legs Syndrome Study Group consensus conference at the Max Planck Institute.

    PubMed

    García-Borreguero, Diego; Allen, Richard P; Kohnen, Ralf; Högl, Birgit; Trenkwalder, Claudia; Oertel, Wolfgang; Hening, Wayne A; Paulus, Walter; Rye, David; Walters, Arthur; Winkelmann, Juliane; Earley, Christopher J

    2007-08-01

    Augmentation of symptom severity is the main complication of dopaminergic treatment of restless legs syndrome (RLS). The current article reports on the considerations of augmentation that were made during a European Restless Legs Syndrome Study Group (EURLSSG)-sponsored Consensus Conference in April 2006 at the Max Planck Institute (MPI) in Munich, Germany, the conclusions of which were endorsed by the International RLS Study Group (IRLSSG) and the World Association of Sleep Medicine (WASM). The Consensus Conference sought to develop a better understanding of augmentation and generate a better operational definition for its clinical identification. Current concepts of the pathophysiology, clinical features, and therapy of RLS augmentation were evaluated by subgroups who presented a summary of their findings for general consideration and discussion. Recent data indicating sensitivity and specificity of augmentation features for identification of augmentation were also evaluated. The diagnostic criteria of augmentation developed at the National Institutes of Health (NIH) conference in 2002 were reviewed in light of current data and theoretical understanding of augmentation. The diagnostic value and criteria for each of the accepted features of augmentation were considered by the group. A consensus was then developed for a revised statement of the diagnostic criteria for augmentation. Five major diagnostic features of augmentation were identified: usual time of RLS symptom onset each day, number of body parts with RLS symptoms, latency to symptoms at rest, severity of the symptoms when they occur, and effects of dopaminergic medication on symptoms. The quantitative data available relating the time of RLS onset and the presence of other features indicated optimal augmentation criteria of either a 4-h advance in usual starting time for RLS symptoms or a combination of the occurrence of other features. A paradoxical response to changes in medication dose also indicates augmentation. Clinical significance of augmentation is defined. The Consensus Conference agreed upon new operational criteria for the clinical diagnosis of RLS augmentation: the MPI diagnostic criteria for augmentation. Areas needing further consideration for validating these criteria and for understanding the underlying biology of RLS augmentation are indicated.

  16. Atypical depression is more common than melancholic in fibromyalgia: an observational cohort study.

    PubMed

    Ross, Rebecca L; Jones, Kim D; Ward, Rachel L; Wood, Lisa J; Bennett, Robert M

    2010-06-14

    It has been postulated that atypical and melancholic depression subtypes exist in depressed fibromyalgia (FM) patients, yet no study has empirically tested this hypothesis. The purpose of this study is to determine whether major depressive disorder (MDD) with atypical features and MDD with melancholic features occurs in a FM sample and to describe their demographic, clinical and diagnostic characteristics. An observational cohort study using a descriptive cross-sectional design recruited a convenience sample of 76 outpatients with FM from an academic rheumatology clinic and a community mental health practice. Diagnoses of FM were confirmed using the 1990 ACR classification guidelines. Diagnoses of MDD and diagnostic subtypes were determined using the DSM-IV-TR criteria. Clinical characteristics were measured using the Fibromyalgia Impact Questionnaire, Structured Interview Guide for the Hamilton Depression Rating Scale with Atypical Depression Supplement and other standardized instruments. Odds ratios were computed on subtype-specific diagnostic criteria. Correlations assessed associations between subtype diagnoses and diagnostic criteria. Of the 76 subjects with FM, 11.8% (n = 9) were euthymic, 52.6% (n = 40) met diagnostic criteria for MDD with atypical features and 35.6% (n = 27) for MDD with melancholic features. Groups did not differ on demographic characteristics except for gender (p = 0.01). The non-depressed and atypical groups trended toward having a longer duration of FM symptoms (18.05 yrs. +/- 12.83; 20.36 yrs. +/- 15.07) compared to the melancholic group (14.11 yrs. +/- 8.82; p = 0.09). The two depressed groups experienced greater severity on all clinical features compared to the non-depressed group. The atypical group did not differ clinically from the melancholic group except the latter experienced greater depression severity (p = 0.001). The atypical group demonstrated the highest prevalence and correlations with atypical-specific diagnostic criteria: (e.g., weight gain/ increased appetite: OR = 3.5, p = 0.02), as did the melancholic group for melancholic-specific criteria: (e.g., anhedonia: OR = 20, p < 0.001). Depressed fibromyalgia patients commonly experience both atypical and melancholic depressive features; however, in this study, atypical depression was 1.5 times more common than melancholic depression. This finding may have significant research and clinical implications.

  17. Dust around Mira variables: An analysis of IRAS LRS spectra

    NASA Technical Reports Server (NTRS)

    Slijkhuis, S.

    1989-01-01

    The spatial extent and spectral appearance of the thin dust shell around Mira variables is determined largely by the dust absorptivity, Q(sub abs)(lambda), and the dust condensation temperature T(sub cond). Both Q(sub abs)(lambda) and T(sub cond) are extracted from IRAS low-resolution spectra (LRS) spectra. In order to do this, the assumption that the ratio of total power in the 10 micron feature to that in the 20 micron feature should be equal to that measured in other amorphous silicates (e.g., synthesized amorphous Mg2SiO4). It was found that T(sub cond) decreases with decreasing strength of the 10 micron feature, from T(sub cond) = 1000 K to 500 K (estimated error 20 percent). A value for the near-infrared dust absorptivity could not be determined. Although this parameter strongly affects the condensation radius, it hardly affects the shape of the LRS spectrum (as long as the optically thin approximation is valid), because it scales the spatial distribution of the dust. Information on the magnitude of the near-infrared dust absorptivity may be deduced from the unique carbon star BM Gem. This star has a LRS spectrum with silicate features indication an inner dust shell temperature of at least 1000 K. However, on the basis of observations in the 1920s-30s one may infer an inner dust shell radius of at least 6x10(exp 12)m. To have this high temperature at such a large distance, the near-infrared absorptivity of the dust must be high.

  18. Fourier domain image fusion for differential X-ray phase-contrast breast imaging.

    PubMed

    Coello, Eduardo; Sperl, Jonathan I; Bequé, Dirk; Benz, Tobias; Scherer, Kai; Herzen, Julia; Sztrókay-Gaul, Anikó; Hellerhoff, Karin; Pfeiffer, Franz; Cozzini, Cristina; Grandl, Susanne

    2017-04-01

    X-Ray Phase-Contrast (XPC) imaging is a novel technology with a great potential for applications in clinical practice, with breast imaging being of special interest. This work introduces an intuitive methodology to combine and visualize relevant diagnostic features, present in the X-ray attenuation, phase shift and scattering information retrieved in XPC imaging, using a Fourier domain fusion algorithm. The method allows to present complementary information from the three acquired signals in one single image, minimizing the noise component and maintaining visual similarity to a conventional X-ray image, but with noticeable enhancement in diagnostic features, details and resolution. Radiologists experienced in mammography applied the image fusion method to XPC measurements of mastectomy samples and evaluated the feature content of each input and the fused image. This assessment validated that the combination of all the relevant diagnostic features, contained in the XPC images, was present in the fused image as well. Copyright © 2017 Elsevier B.V. All rights reserved.

  19. Mid-Infrared Properties of OH Megamaser Host Galaxies. I. Spitzer IRS Low- and High-Resolution Spectroscopy

    NASA Astrophysics Data System (ADS)

    Willett, Kyle W.; Darling, Jeremy; Spoon, Henrik W. W.; Charmandaris, Vassilis; Armus, Lee

    2011-03-01

    We present mid-infrared spectra and photometry from the Infrared Spectrograph on the Spitzer Space Telescope for 51 OH megamasers (OHMs), along with 15 galaxies confirmed to have no megamaser emission above L OH = 102.3 L sun. The majority of galaxies display moderate-to-deep 9.7 μm amorphous silicate absorption, with OHM galaxies showing stronger average absorption and steeper 20-30 μm continuum emission than non-masing galaxies. Emission from multiple polycyclic aromatic hydrocarbons (PAHs), especially at 6.2, 7.7, and 11.3 μm, is detected in almost all systems. Fine-structure atomic emission (including [Ne II], [Ne III], [S III], and [S IV]) and multiple H2 rotational transitions are observed in more than 90% of the sample. A subset of galaxies show emission from rarer atomic lines, such as [Ne V], [O IV], and [Fe II]. Fifty percent of the OHMs show absorption from water ice and hydrogenated amorphous carbon grains, while absorption features from CO2, HCN, C2H2, and crystalline silicates are also seen in several OHMs. Column densities of OH derived from 34.6 μm OH absorption are similar to those derived from 1667 MHz OH absorption in non-masing galaxies, indicating that the abundance of masing molecules is similar for both samples. This data paper presents full mid-infrared spectra for each galaxy, along with measurements of line fluxes and equivalent widths, absorption feature depths, and spectral indices.

  20. Statistical Analysis of Hubble /WFC3 Transit Spectroscopy of Extrasolar Planets

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Fu, Guangwei; Deming, Drake; Knutson, Heather

    2017-10-01

    Transmission spectroscopy provides a window to study exoplanetary atmospheres, but that window is fogged by clouds and hazes. Clouds and haze introduce a degeneracy between the strength of gaseous absorption features and planetary physical parameters such as abundances. One way to break that degeneracy is via statistical studies. We collect all published HST /WFC3 transit spectra for 1.1–1.65 μ m water vapor absorption and perform a statistical study on potential correlations between the water absorption feature and planetary parameters. We fit the observed spectra with a template calculated for each planet using the Exo-transmit code. We express the magnitude ofmore » the water absorption in scale heights, thereby removing the known dependence on temperature, surface gravity, and mean molecular weight. We find that the absorption in scale heights has a positive baseline correlation with planetary equilibrium temperature; our hypothesis is that decreasing cloud condensation with increasing temperature is responsible for this baseline slope. However, the observed sample is also intrinsically degenerate in the sense that equilibrium temperature correlates with planetary mass. We compile the distribution of absorption in scale heights, and we find that this distribution is closer to log-normal than Gaussian. However, we also find that the distribution of equilibrium temperatures for the observed planets is similarly log-normal. This indicates that the absorption values are affected by observational bias, whereby observers have not yet targeted a sufficient sample of the hottest planets.« less

  1. Statistical Analysis of Hubble/WFC3 Transit Spectroscopy of Extrasolar Planets

    NASA Astrophysics Data System (ADS)

    Fu, Guangwei; Deming, Drake; Knutson, Heather; Madhusudhan, Nikku; Mandell, Avi; Fraine, Jonathan

    2018-01-01

    Transmission spectroscopy provides a window to study exoplanetary atmospheres, but that window is fogged by clouds and hazes. Clouds and haze introduce a degeneracy between the strength of gaseous absorption features and planetary physical parameters such as abundances. One way to break that degeneracy is via statistical studies. We collect all published HST/WFC3 transit spectra for 1.1-1.65 micron water vapor absorption, and perform a statistical study on potential correlations between the water absorption feature and planetary parameters. We fit the observed spectra with a template calculated for each planet using the Exo-Transmit code. We express the magnitude of the water absorption in scale heights, thereby removing the known dependence on temperature, surface gravity, and mean molecular weight. We find that the absorption in scale heights has a positive baseline correlation with planetary equilibrium temperature; our hypothesis is that decreasing cloud condensation with increasing temperature is responsible for this baseline slope. However, the observed sample is also intrinsically degenerate in the sense that equilibrium temperature correlates with planetary mass. We compile the distribution of absorption in scale heights, and we find that this distribution is closer to log-normal than Gaussian. However, we also find that the distribution of equilibrium temperatures for the observed planets is similarly log-normal. This indicates that the absorption values are affected by observational bias, whereby observers have not yet targeted a sufficient sample of the hottest planets.

  2. Statistical Analysis of Hubble/WFC3 Transit Spectroscopy of Extrasolar Planets

    NASA Astrophysics Data System (ADS)

    Fu, Guangwei; Deming, Drake; Knutson, Heather; Madhusudhan, Nikku; Mandell, Avi; Fraine, Jonathan

    2017-10-01

    Transmission spectroscopy provides a window to study exoplanetary atmospheres, but that window is fogged by clouds and hazes. Clouds and haze introduce a degeneracy between the strength of gaseous absorption features and planetary physical parameters such as abundances. One way to break that degeneracy is via statistical studies. We collect all published HST/WFC3 transit spectra for 1.1-1.65 μm water vapor absorption and perform a statistical study on potential correlations between the water absorption feature and planetary parameters. We fit the observed spectra with a template calculated for each planet using the Exo-transmit code. We express the magnitude of the water absorption in scale heights, thereby removing the known dependence on temperature, surface gravity, and mean molecular weight. We find that the absorption in scale heights has a positive baseline correlation with planetary equilibrium temperature; our hypothesis is that decreasing cloud condensation with increasing temperature is responsible for this baseline slope. However, the observed sample is also intrinsically degenerate in the sense that equilibrium temperature correlates with planetary mass. We compile the distribution of absorption in scale heights, and we find that this distribution is closer to log-normal than Gaussian. However, we also find that the distribution of equilibrium temperatures for the observed planets is similarly log-normal. This indicates that the absorption values are affected by observational bias, whereby observers have not yet targeted a sufficient sample of the hottest planets.

  3. Suzaku Observations Of Near-relativistic Outflows In The Bal Quasar APM 08279+5255.

    NASA Astrophysics Data System (ADS)

    Saez, Cristian; Chartas, G.; Brandt, N.

    2009-12-01

    We present results from three Suzaku observations of the z =3.91 gravitationally lensed broad absorption line quasar APM 08279+5255. We detect strong and broad absorption at rest-frame energies of <2 keV (low-energy) and 7-12 keV (high-energy). The detection of these features confirms the results of previous long-exposure (80-90 ks) Chandra and XMM-Newton observations. The low and high-energy absorption is detected in both the back-illuminated (BI) and front-illuminated (FI) Suzaku XIS spectra (with an F-test significance of <99%). We interpret the low-energy absorption as arising from a low ionization absorber with logNH 23 and the high-energy absorption as due to lines arising from highly ionized iron in a near-relativistic outflowing wind. Assuming this interpretation we find that the velocities in the outflow range between 0.1c and 0.6c. We constrain the angle between the outflow direction of the X-ray absorber and our line of sight to be <36 degrees. We also detect possible variability of the absorption lines (at the <99.9% and <98% significance levels in the FI and BI spectra, respectively) with a rest-frame time scale of 1 month. Assuming that the detected high-energy absorption features arise from FeXXV, we estimate that the fraction of the total bolometric energy injected over the quasar's lifetime into the intergalactic medium in the form of kinetic energy to be >10%.

  4. Abnormal hubs of white matter networks in the frontal-parieto circuit contribute to depression discrimination via pattern classification.

    PubMed

    Qin, Jiaolong; Wei, Maobin; Liu, Haiyan; Chen, Jianhuai; Yan, Rui; Hua, Lingling; Zhao, Ke; Yao, Zhijian; Lu, Qing

    2014-12-01

    Previous studies had explored the diagnostic and prognostic value of the structural neuroimaging data of MDD and treated the whole brain voxels, the fractional anisotropy and the structural connectivity as classification features. To our best knowledge, no study examined the potential diagnostic value of the hubs of anatomical brain networks in MDD. The purpose of the current study was to provide an exploratory examination of the potential diagnostic and prognostic values of hubs of white matter brain networks in MDD discrimination and the corresponding impaired hub pattern via a multi-pattern analysis. We constructed white matter brain networks from 29 depressions and 30 healthy controls based on diffusion tensor imaging data, calculated nodal measures and identified hubs. Using these measures as features, two types of feature architectures were established, one only included hubs (HUB) and the other contained both hubs and non hubs. The support vector machine classifiers with Gaussian radial basis kernel were used after the feature selection. Moreover, the relative contribution of the features was estimated by means of the consensus features. Our results presented that the hubs (including the bilateral dorsolateral part of superior frontal gyrus, the left middle frontal gyrus, the bilateral middle temporal gyrus, and the bilateral inferior temporal gyrus) played an important role in distinguishing the depressions from healthy controls with the best accuracy of 83.05%. Moreover, most of the HUB consensus features located in the frontal-parieto circuit. These findings provided evidence that the hubs could be served as valuable potential diagnostic measure for MDD, and the hub-concentrated lesion distribution of MDD was primarily anchored within the frontal-parieto circuit. Copyright © 2014 Elsevier Inc. All rights reserved.

  5. 4.6 micron absorption features due to solid phase CO and cyano group molecules toward compact infrared sources

    NASA Technical Reports Server (NTRS)

    Lacy, J. H.; Baas, F.; Allamandola, L. J.; Van De Bult, C. E. P.; Persson, S. E.; Mcgregor, P. J.; Lonsdale, C. J.; Geballe, T. R.

    1984-01-01

    Spectra obtained at a resolving power of 840, for seven protostellar sources in the region of the 4.67-micron fundamental vibrational band of CO, indicate that the deep absorption feature in W33A near 4.61 microns consists of three features which are seen in other sources, but with varying relative strength. UV-irradiation laboratory experiments with 'dirty ice' temperature cycling allow the identification of two of the features cited with solid CO and CO complexed to other molecules. Cyano group-containing molecules have a lower vapor pressure than CO, and can therefore survive in much warmer environments. The formation and location of the CO- and CN-bearing grain mantles and sources of UV irradiation in cold molecular clouds are discussed. Plausible UV light sources can produce the observed cyano group features, but only under conditions in which local heat sources do not cause evaporation of the CO molecules prior to their photoprocessing.

  6. Imperfectly geometric shapes of nanograting structures as solar absorbers with superior performance for solar cells.

    PubMed

    Nguyen-Huu, Nghia; Cada, Michael; Pištora, Jaromír

    2014-03-10

    The expectation of perfectly geometric shapes of subwavelength grating (SWG) structures such as smoothness of sidewalls and sharp corners and nonexistence of grating defects is not realistic due to micro/nanofabrication processes. This work numerically investigates optical properties of an optimal solar absorber comprising a single-layered silicon (Si) SWG deposited on a finite Si substrate, with a careful consideration given to effects of various types of its imperfect geometry. The absorptance spectra of the solar absorber with different geometric shapes, namely, the grating with attached nanometer-sized features at the top and bottom of sidewalls and periodic defects within four and ten grating periods are investigated comprehensively. It is found that the grating with attached features at the bottom absorbs more energy than both the one at the top and the perfect grating. In addition, it is shown that the grating with defects in each fourth period exhibits the highest average absorptance (91%) compared with that of the grating having defects in each tenth period (89%), the grating with attached features (89%), and the perfect one (86%). Moreover, the results indicate that the absorptance spectrum of the imperfect structures is insensitive to angles of incidence. Furthermore, the absorptance enhancement is clearly demonstrated by computing magnetic field, energy density, and Poynting vector distributions. The results presented in this study prove that imperfect geometries of the nanograting structure display a higher absorptance than the perfect one, and provide such a practical guideline for nanofabrication capabilities necessary to be considered by structure designers.

  7. Line identifications, line strengths, and continuum flux measurements in the ultraviolet spectrum of Arcturus

    NASA Technical Reports Server (NTRS)

    Carpenter, K. G.; Wing, R. F.; Stencel, R. E.

    1985-01-01

    The ultraviolet spectrum of Arcturus has been observed at high resolution with the IUE satellite. Line identifications, mean absolute 'continuum' flux measurements, integrated absolute emission-line fluxes, and measurements of selected absorption line strengths are presented for the 2250-2930 A region. In the 1150-2000 A region, identifications are given primarily on the basis of low-resolution spectra. Chromospheric emission lines have been identified with low-excitation species including H I, C I, C II, O I, Mg I, Mg II, Al II, Si I, Si II, S I, and Fe II; there is no evidence for lines of C IV, N V, or other species requiring high temperatures. A search for molecular absorption features in the 2500-2930 A interval has led to several tentative identifications, but only OH could be established as definitely present. Iron lines strongly dominate the identifications in the 2250-2930 A region, Fe II accounting for about 86 percent of the emission features and Fe I for 43 percent of the identified absorption features.

  8. Character and spatial distribution of OH/H2O on the surface of the Moon seen by M3 on Chandrayaan-1.

    PubMed

    Pieters, C M; Goswami, J N; Clark, R N; Annadurai, M; Boardman, J; Buratti, B; Combe, J-P; Dyar, M D; Green, R; Head, J W; Hibbitts, C; Hicks, M; Isaacson, P; Klima, R; Kramer, G; Kumar, S; Livo, E; Lundeen, S; Malaret, E; McCord, T; Mustard, J; Nettles, J; Petro, N; Runyon, C; Staid, M; Sunshine, J; Taylor, L A; Tompkins, S; Varanasi, P

    2009-10-23

    The search for water on the surface of the anhydrous Moon had remained an unfulfilled quest for 40 years. However, the Moon Mineralogy Mapper (M3) on Chandrayaan-1 has recently detected absorption features near 2.8 to 3.0 micrometers on the surface of the Moon. For silicate bodies, such features are typically attributed to hydroxyl- and/or water-bearing materials. On the Moon, the feature is seen as a widely distributed absorption that appears strongest at cooler high latitudes and at several fresh feldspathic craters. The general lack of correlation of this feature in sunlit M3 data with neutron spectrometer hydrogen abundance data suggests that the formation and retention of hydroxyl and water are ongoing surficial processes. Hydroxyl/water production processes may feed polar cold traps and make the lunar regolith a candidate source of volatiles for human exploration.

  9. Character and spatial distribution of OH/H2O on the surface of the moon seen by M3 on chandrayaan-1

    USGS Publications Warehouse

    Pieters, C.M.; Goswami, J.N.; Clark, R.N.; Annadurai, M.; Boardman, J.; Buratti, B.; Combe, J.-P.; Dyar, M.D.; Green, R.; Head, J.W.; Hibbitts, C.; Hicks, M.; Isaacson, P.; Klima, R.; Kramer, G.; Kumar, S.; Livo, E.; Lundeen, S.; Malaret, E.; McCord, T.; Mustard, J.; Nettles, J.; Petro, N.; Runyon, C.; Staid, M.; Sunshine, J.; Taylor, L.A.; Tompkins, S.; Varanasi, P.

    2009-01-01

    The search for water on the surface of the anhydrous Moon had remained an unfulfilled quest for 40 years. However, the Moon Mineralogy Mapper (M 3) on Chandrayaan-1 has recently detected absorption features near 2.8 to 3.0 micrometers on the surface of the Moon. For silicate bodies, such features are typically attributed to hydroxyl- and/or water-bearing materials. On the Moon, the feature is seen as a widely distributed absorption that appears strongest at cooler high latitudes and at several fresh feldspathic craters. The general lack of correlation of this feature in sunlit M3 data with neutron spectrometer hydrogen abundance data suggests that the formation and retention of hydroxyl and water are ongoing surficial processes. Hydroxyl/water production processes may feed polar cold traps and make the lunar regolith a candidate source of volatiles for human exploration.

  10. The changes of the frequency specific impedance of the human body due to the resonance in the kHz range in cancer diagnostics

    NASA Astrophysics Data System (ADS)

    Michalak, K. P.; Nawrocka-Bogusz, H.

    2011-12-01

    The frequency-specific absorption of kHz signals has been postulated for different tissues, trace elements, vitamins, toxins, pathogens, allergens etc. for low-power (μV) signals. An increase in the impedance of the human body is observed only up to the given power of the applied signal. The highest amplification of the given signal being damped by the body makes it possible to determine the intensity of the given process in the body (e.g. amount of the toxin, trace element, intensity of the allergy) being connected with a given frequency spectrum of the signal. The mechanism of frequency-specific absorption can be explained by means of the Quantum Field Theory being applied to the structure of the water. Substantially high coincidence between the frequencies of the rotation of free quasi-excited electrons in coherent domains of water and the frequencies being used in the MORA diagnostics (Med-Tronic GmbH, EN ISO 13485, EN ISO 9001) can be observed. These frequencies are located in the proximity of f = 7kHz · i (i = 1,3,5,7,...). This fact suggests that the coherent domains with the admixtures of the given substances create structure-specific coherent domains that possess frequency-specific absorption spectra. The diagnostic tool called "MORA System diagnosis" was used to investigate 102 patients with different types and stages of cancer. Many signals were observed to be absorbed by many cancer patients, e.g.: 'Cellular defense system', 'Degeneration tendencies', Manganese, Magnesium, Zinc, Selenium, Vitamin E, Glutamine, Glutathione, Cysteine, Candida albicans, Mycosis. The results confirm the role of oxidative stress, immunological system deficiency and mitochondria malfunction in the development of cancer.

  11. Spectrophotometric characterization of hemozoin as a malaria biomarker

    NASA Astrophysics Data System (ADS)

    Silva, Ivo; Lima, Rui; Minas, Graça.; Catarino, Susana O.

    2017-08-01

    Malaria is a parasitic disease with more than a billion people worldwide at risk of contraction. The disease is predominantly widespread in regions with precarious healthcare conditions and resources. Despite the several available malaria diagnostic methods, only two are predominantly used in the field in malaria-endemic countries: microscopy and rapid diagnostic tests. In this work, an alternative diagnostic system is proposed, based on optical absorption spectrophotometry. The main objective of this paper is the spectrophotometric study of hemozoin as a malaria biomarker, since it is a sub-product of the malaria infection. The optical absorbance of hemoglobin and hemozoin solutions in purified water was measured in the visible spectrum range using a spectrophotometric setup. The results showed main absorbance peaks at 540 nm and 574 nm for hemoglobin, and at 672 nm for hemozoin. The tests performed in aqueous solutions have shown that both hemoglobin and synthetic hemozoin, when alone in solution, were detected by absorbance, with sensitivity of 0.05 g/L, and with a high linearity (R2> 0.92 for all wavelength peaks). Furthermore, it was found that the whole blood and the hemoglobin spectra have similar absorption peaks. By combining whole blood and synthetic hemozoin solutions, it was proved that both the hemozoin and the hemoglobin absorbance peaks could still be detected by spectrophotometry. For instance, in polydimethylsiloxane wells, the proposed method was able to detect hemozoin in whole blood samples for optical paths as low as 3 mm in cylindrical wells, thus proving the capability for this method's miniaturization. With this work, it is possible to conclude that hemozoin is a viable candidate as a biomarker for malaria detection by optical absorption spectrophotometry and also, that an autonomous, fully integrated and low cost miniaturized system, based on such a principle, could provide an efficient diagnosis of malaria.

  12. [Dissociative phenomena in a sample of outpatients].

    PubMed

    Cantone, Daniela; Sperandeo, Raffaele; Maldonato, Mauro Nelson; Cozzolino, Pasquale; Perris, Francesco

    2012-01-01

    The study describes the frequency and the quality of dissociative phenomena and their relationship with axis I disorders and the psychopathological severity in outpatients. The sample (N=383) was subjected to MINI diagnostic interview and self-assessment scales DES and SCL-90. The data were analysed using SPSS. The 11,0% of subjects has a score ≥20 on DES. The 5,2% has no dissociative symptoms. The absorption images is the most frequent dissociative phenomenon, the less common is the dissociation amnesia. A relationship between dissociative phenomena and conditions unemployment, marital separation and single parties and an inverse relationship with age founded. Dissociative phenomena are more frequent in participants who have been diagnosed at least one axis I disorder and their severity is positively correlated with the number of diagnosed diseases and scores to the General Symptomatic Index. Our results point towards the existence of three types of dissociative experiences. The first type, represented by the factor absorption/imaginative involvement, is expressed along a continuum from normal to pathological; a second type, represented by the factor depersonalization/derealization, occurs in a significantly more intense and specific among subjects with axis I disorders; the latest manifestation dissociative, described by the dissociation amnesia, seems to have a predominantly typological feature that qualifies it as an experience not commonly distributed in the general population. The identifying of dissociative symptoms is necessary for the psychopathologic evaluation and to improve the effectiveness of treatment programs.

  13. Evidence for sulphur implantation in Europa's UV absorption band

    NASA Technical Reports Server (NTRS)

    Lane, A. L.; Nelson, R. M.; Matson, D. L.

    1981-01-01

    The UV spectral characteristics of the Galilean satellites are investigated (using data from the International Ultraviolet Explorer (IUE) spacecraft) as a function of the orbital position, large-scale areal variability, and temporal dynamics. The discovery of an absorption feature at 280 nm in Europa's reflection spectrum is reported and observations show that the absorption is strongest on the trailing hemisphere (central longitude 270 degrees). The feature resembles SO2 and seems to result from S-O bond formation between deeply implanted sulphur atoms and the adjacent damaged water-ice-lattice. The sulphur supposedly comes from energetic (hundreds of keV) sulphur ions that are present in the Jovian magnetosphere. An appropriate equilibrium condition can be found to match the observed spectral data if sputtering erosion occurs at no greater than approximately 20 meters per one billion years.

  14. Transition-metal-substituted indium thiospinels as novel intermediate-band materials: prediction and understanding of their electronic properties.

    PubMed

    Palacios, P; Aguilera, I; Sánchez, K; Conesa, J C; Wahnón, P

    2008-07-25

    Results of density-functional calculations for indium thiospinel semiconductors substituted at octahedral sites with isolated transition metals (M=Ti,V) show an isolated partially filled narrow band containing three t2g-type states per M atom inside the usual semiconductor band gap. Thanks to this electronic structure feature, these materials will allow the absorption of photons with energy below the band gap, in addition to the normal light absorption of a semiconductor. To our knowledge, we demonstrate for the first time the formation of an isolated intermediate electronic band structure through M substitution at octahedral sites in a semiconductor, leading to an enhancement of the absorption coefficient in both infrared and visible ranges of the solar spectrum. This electronic structure feature could be applied for developing a new third-generation photovoltaic cell.

  15. Phase-dependent absorption features in X-ray spectra of X-ray Dim Isolated Neutron Stars

    NASA Astrophysics Data System (ADS)

    Borghese, A.; Rea, N.; Coti Zelati, F.; Turolla, R.; Tiengo, A.; Zane, S.

    2017-12-01

    A detailed phase-resolved spectroscopy of archival XMM-Newton observations of X-ray Dim Isolated Neutron Stars (XDINSs) led to the discovery of narrow and strongly phase-dependent absorption features in two of these sources. The first was discovered in the X-ray spectrum of RX J0720.4-3125, followed by a new possible candidate in RX J1308.6+2127. Both spectral lines have similar properties: they are detected for only ˜ 20% of the rotational cycle and appear to be stable over the timespan covered by the observations. We performed Monte Carlo simulations to test the significance of these phase-variable features and in both cases the outcome has confirmed the detection with a confidence level > 4.6σ. Because of the narrow width and the strong dependence on the pulsar rotational phase, the most likely interpretation for these spectral features is in terms of resonant proton cyclotron absorption scattering in a confined high-B structure close to the stellar surface. Within the framework of this interpretation, our results provide evidence for deviations from a pure dipole magnetic field on small scales for highly magnetized neutron stars and support the proposed scenario of XDINSs being aged magnetars, with a strong non-dipolar crustal B-field component.

  16. Diagnostic assessment of intraoperative cytology for papillary thyroid carcinoma: using a decision tree analysis.

    PubMed

    Pyo, J-S; Sohn, J H; Kang, G

    2017-03-01

    The aim of this study was to elucidate the cytological characteristics and the diagnostic usefulness of intraoperative cytology (IOC) for papillary thyroid carcinoma (PTC). In addition, using decision tree analysis, effective features for accurate cytological diagnosis were sought. We investigated cellularity, cytological features and diagnosis based on the Bethesda System for Reporting Thyroid Cytopathology in IOC of 240 conventional PTCs. The cytological features were evaluated in terms of nuclear score with nuclear features, and additional figures such as presence of swirling sheets, psammoma bodies, and multinucleated giant cells. The nuclear score (range 0-7) was made via seven nuclear features, including (1) enlarged, (2) oval or irregularly shaped nuclei, (3) longitudinal nuclear grooves, (4) intranuclear cytoplasmic pseudoinclusion, (5) pale nuclei with powdery chromatin, (6) nuclear membrane thickening, and (7) marginally placed micronucleoli. Nuclear scores in PTC, suspicious for malignancy, and atypia of undetermined significance cases were 6.18 ± 0.80, 4.48 ± 0.82, and 3.15 ± 0.67, respectively. Additional figures more frequent in PTC than in other diagnostic categories were identified. Cellularity of IOC significantly correlated with tumor size, nuclear score, and presence of additional figures. Also, IOCs with higher nuclear scores (4-7) significantly correlated with larger tumor size and presence of additional figures. In decision tree analysis, IOCs with nuclear score >5 and swirling sheets could be considered diagnostic for PTCs. Our study suggests that IOCs using nuclear features and additional figures could be useful with decreasing the likelihood of inconclusive results.

  17. A long-term space astrophysics research program: The evolution of the quasar continuum

    NASA Technical Reports Server (NTRS)

    Elvis, M.

    1993-01-01

    The research program supported by this grant now has great momentum. Numerous papers are in progress, and a strong multi-wavelength observing program is rapidly accumulating data on samples of high redshift quasars across the spectrum. ROSAT spectra of quasars continue to yield surprises. Of four z = 3 quasars with X-ray spectra, three show strong absorption. This contrasts strongly with the situation for luminous AGN at low redshifts where fewer than 1 in 20 show X-ray absorption. A new site for this absorption is probably needed, either around the quasar (e.g. in a cluster cooling flow) or along the line of sight (e.g. in a Damped Lyman-alpha system). The unabsorbed quasar allows limits on the physical conditions in a damped Lyman-alpha cloud to be calculated, and will allow a X-ray Gunn-Peterson test to be applied that will limit the fraction of the closure mass in an intergalactic medium. The X-ray spectral indices of these z = 3 quasars show no change from those of similar objects at low z, suggesting that 'short-lifetime' models apply. Eight other z = 3-4 quasars have been detected and their energy distributions from X-rays to Infrared (using new infrared spectrographs) have been compiled. These are now being compared with the low z continua from the 'Atlas of Quasar Energy Distributions' to search for evolutionary changes. The discovery of a likely warm absorber in 3C351 made recognition of another example simple. Also, modeling of the conditions in the absorber in 3C351 using the OVI absorption line from HST and the high ionization emission lines, suggests that the broad line region is indeed the origin of the warm absorber in this quasar, and by extension, others. Warm absorbers can now be used as a new diagnostic of this region. The X-ray spectrum of a 'Red Quasar', 3C212, has a cut-off spectrum, which could be fitted by an absorbed power-law, or more remarkably, by an unabsorbed black body. Using our quasi-simultaneous optical data and photoionization modeling we are able to rule out this latter possibility. The long-sought key to understanding red quasars has now been found. (Reddening was earlier ruled out because no 2175A absorption feature was seen. This is now seen to have been misleading.)

  18. Laboratory Studies of Organic Compounds With Reflectance Spectroscopy

    NASA Astrophysics Data System (ADS)

    Curchin, J. M.; Clark, R. N.; Hoefen, T. M.

    2007-12-01

    In order to properly interpret reflectance spectra of any solar system surface from the earth to the Oort cloud, laboratory spectra of candidate materials for comparative analysis are needed. Although the common cosmochemical species (H2O, CO2, CO, NH3, and CH4) are well represented in the spectroscopic literature, comparatively little reflectance work has been done on organics from room to cryogenic temperatures at visible to near infrared wavelengths. Reflectance spectra not only enhance weak or unseen transmission features, they are also more analogous to spectra obtained by spacecraft that are imaging such bodies as giant planet moons, kuiper belt objects, centaurs, comets and asteroids, as well as remote sensing of the earth. The USGS Spectroscopy Laboratory is measuring reflectance spectra of organic compounds from room to cryogenic temperatures over the spectral range of 0.35 to 15.5 microns. This region encompasses the fundamental absorptions and many overtones and combinations of C, H, O, and N molecular bonds. Because most organic compounds belong to families whose members have similar structure and composition, individual species identification within a narrow wavelength range may be ambiguous. By measuring spectral reflectance of the pure laboratory samples from the visible through the near and mid-infrared, absorption bands unique to each can be observed, cataloged, and compared to planetary reflectance data. We present here spectra of organic compounds belonging to five families: the alkanes, alkenes, alkynes, aromatics, and cyanides. Common to all of these are the deep C-H stretch fundamental absorptions, which shift shortward from 3.35+ microns in alkanes to 3.25+ microns in aromatics, to 3.2+ microns in alkenes, and down to 3.0+ microns in alkynes. Mid-IR absorptions due to C-H bending deformations at 6.8+ and 7.2+ microns are also identified. In the near infrared these stretching and bending fundamentals yield a diagnostic set of combination absorptions at approximately 2.3 microns, as well as the first C-H stretching overtones at 1.6 to 1.7 microns, and even the second stretching overtones at 1.2+ microns. Additionally, the spectral properties of these organic materials have applications to remote sensing of terrestrial environments, including hazardous waste and disaster site characterization.

  19. Generalized Landauer equation: Absorption-controlled diffusion processes

    NASA Astrophysics Data System (ADS)

    Godoy, Salvador; García-Colín, L. S.; Micenmacher, Victor

    1999-05-01

    The exact expression of the one-dimensional Boltzmann multiple-scattering coefficients, for the passage of particles through a slab of a given material, is obtained in terms of the single-scattering cross section of the material, including absorption. The remarkable feature of the result is that for multiple scattering in a metal, free from absorption, one recovers the well-known Landauer result for conduction electrons. In the case of particles, such as neutrons, moving through a weak absorbing media, Landuer's formula is modified due to the absorption cross section. For photons, in a strong absorbing media, one recovers the Lambert-Beer equation. In this latter case one may therefore speak of absorption-controlled diffusive processes.

  20. Hydrolysis Batteries: Generating Electrical Energy during Hydrogen Absorption.

    PubMed

    Xiao, Rui; Chen, Jun; Fu, Kai; Zheng, Xinyao; Wang, Teng; Zheng, Jie; Li, Xingguo

    2018-02-19

    The hydrolysis reaction of aluminum can be decoupled into a battery by pairing an Al foil with a Pd-capped yttrium dihydride (YH 2 -Pd) electrode. This hydrolysis battery generates a voltage around 0.45 V and leads to hydrogen absorption into the YH 2 layer. This represents a new hydrogen absorption mechanism featuring electrical energy generation during hydrogen absorption. The hydrolysis battery converts 8-15 % of the thermal energy of the hydrolysis reaction into usable electrical energy, leading to much higher energy efficiency compared to that of direct hydrolysis. © 2018 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

  1. Special Features of Light Absorption by the Dimer of Bilayer Microparticles

    NASA Astrophysics Data System (ADS)

    Geints, Yu. É.; Panina, E. K.; Zemlyanov, A. A.

    2018-05-01

    Results of numerical simulation of light absorption by the dimer of bilayer spherical particles consisting of a water core and a polymer shell absorbing radiation are presented. The spatial distribution and the amplitude characteristics of the volume density of the absorbed power are investigated. It is shown that for a certain spatial dimer configuration, the maximal achievable density of the absorbed power is realized. It is also established that for closely spaced microcapsules with high shell absorption indices, the total power absorbed in the dimer volume can increase in comparison with the radiation absorption by two insulated microparticles.

  2. Molecular dynamics simulations of collision-induced absorption: Implementation in LAMMPS

    NASA Astrophysics Data System (ADS)

    Fakhardji, W.; Gustafsson, M.

    2017-02-01

    We pursue simulations of collision-induced absorption in a mixture of argon and xenon gas at room temperature by means of classical molecular dynamics. The established theoretical approach (Hartmann et al. 2011 J. Chem. Phys. 134 094316) is implemented with the molecular dynamics package LAMMPS. The bound state features in the absorption spectrum are well reproduced with the molecular dynamics simulation in comparison with a laboratory measurement. The magnitude of the computed absorption, however, is underestimated in a large part of the spectrum. We suggest some aspects of the simulation that could be improved.

  3. Christiansen effect in disperse systems with resonant absorption

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Zimnyakov, D A; Isaeva, Elmira A; Isaeva, A A

    We discuss the results of experimental studies of competition of absorption and scattering of laser radiation propagating in dispersive media with resonant absorption. As media under study, use is made of a suspension of polystyrene particles in solutions of rhodamine 6G in ethylene glycol probed by laser light with a wavelength of 532 nm. It is found that an increase in the dye concentration leads to an increase in optical transmittance of suspensions and an increase in speckle modulation of the forward-scattered radiation. We interpret these features as a manifestation of Christiansen effect in disperse systems with resonance absorption.

  4. Spectrum of Transient ASASSN-13at

    NASA Astrophysics Data System (ADS)

    Garnavich, Peter; Deal, Shanel

    2013-06-01

    We observed the transient ASASSN-13at (ATEL 5168) on June 28.3 (UT) with the Vatican Advanced Technology Telescope (VATT) and VATTSPEC instrument. The resulting spectrum covers the wavelength range between 365 nm and 750 nm with a resolution of 1100. The spectrum of ASASSN-13at shows a blue continuum with strong Balmer absorption lines. Helium absorption at 447 nm and 588 nm is also seen. Blue-shifted emission lines are visible within the Halpha and Hbeta absorption features.

  5. Development of Thomson scattering system on Shenguang-III prototype laser facility

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Gong, Tao; Research Center of Laser Fusion, China Academy of Engineering Physics, Mianyang, Sichuan 621900; Li, Zhichao

    2015-02-15

    A Thomson scattering diagnostic system, using a 263 nm laser as the probe beam, is designed and implemented on Shenguang-III prototype laser facility. The probe beam is provided by an additional beam line completed recently. The diagnostic system allows simultaneous measurements of both ion feature and red-shifted electron feature from plasmas in a high-temperature (≥2 keV) and high-density (≥10{sup 21} cm{sup −3}) regime. Delicate design is made to satisfy the requirements for successful detection of the electron feature. High-quality ion feature spectra have already been diagnosed via this system in recent experiments with gas-filled hohlraums.

  6. Extreme Variability in a Broad Absorption Line Quasar

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Stern, Daniel; Jun, Hyunsung D.; Graham, Matthew J.

    CRTS J084133.15+200525.8 is an optically bright quasar at z = 2.345 that has shown extreme spectral variability over the past decade. Photometrically, the source had a visual magnitude of V ∼ 17.3 between 2002 and 2008. Then, over the following five years, the source slowly brightened by approximately one magnitude, to V ∼ 16.2. Only ∼1 in 10,000 quasars show such extreme variability, as quantified by the extreme parameters derived for this quasar assuming a damped random walk model. A combination of archival and newly acquired spectra reveal the source to be an iron low-ionization broad absorption line quasar withmore » extreme changes in its absorption spectrum. Some absorption features completely disappear over the 9 years of optical spectra, while other features remain essentially unchanged. We report the first definitive redshift for this source, based on the detection of broad H α in a Keck/MOSFIRE spectrum. Absorption systems separated by several 1000 km s{sup −1} in velocity show coordinated weakening in the depths of their troughs as the continuum flux increases. We interpret the broad absorption line variability to be due to changes in photoionization, rather than due to motion of material along our line of sight. This source highlights one sort of rare transition object that astronomy will now be finding through dedicated time-domain surveys.« less

  7. Spectroscopy as a tool for geochemical modeling

    NASA Astrophysics Data System (ADS)

    Kopacková, Veronika; Chevrel, Stephane; Bourguignon, Anna

    2011-11-01

    This study focused on testing the feasibility of up-scaling ground-spectra-derived parameters to HyMap spectral and spatial resolution and whether they could be further used for a quantitative determination of the following geochemical parameters: As, pH and Clignite content. The study was carried on the Sokolov lignite mine as it represents a site with extreme material heterogeneity and high heavy-metal gradients. A new segmentation method based on the unique spectral properties of acid materials was developed and applied to the multi-line HyMap image data corrected for BRDF and atmospheric effects. The quantitative parameters were calculated for multiple absorption features identified within the VIS/VNIR/SWIR regions (simple band ratios, absorption band depth and quantitative spectral feature parameters calculated dynamically for each spectral measurement (centre of the absorption band (λ), depth of the absorption band (D), width of the absorption band (Width), and asymmetry of the absorption band (S)). The degree of spectral similarity between the ground and image spectra was assessed. The linear models for pH, As and the Clignite content of the whole and segmented images were cross-validated on the selected homogenous areas defined in the HS images using ground truth. For the segmented images, reliable results were achieved as follows: As: R2=0.84, Clignite: R2=0.88 and R2 pH: R2= 0.57.

  8. How to manage thyroid nodules with two consecutive non-diagnostic results on ultrasonography-guided fine-needle aspiration.

    PubMed

    Moon, Hee Jung; Kwak, Jin Young; Choi, Yoon Seong; Kim, Eun-Kyung

    2012-03-01

    The aim of this study was to investigate the factors for considering surgery on thyroid nodules that had non-diagnostic results on two consecutive cytology examinations. A total of 104 thyroid nodules with two consecutive non-diagnostic cytology examinations in 104 patients were investigated. Nodules with one or more suspicious ultrasonography (US) features of marked hypoechogenicity, a not well defined margin, microcalcifications, or a taller-than-wide shape were assessed as sonographically suspicious. Those without any suspicious features were assessed as sonographically benign. The clinicopathologic characteristics of patients and US features of the nodules were compared according to malignancy and benignity. The odds ratio for predicting malignancy was calculated. Altogether, 12 nodules were malignant, and 92 were benign. Age, sex, nodule size, and solidness were not associated with malignancy (P = 0.73, 0.92, 0.48, and 0.73, respectively). The malignancy rate of sonographically suspicious nodules was 25.7%, higher than the 4.3% of sonographically benign nodules (P = 0.002). The odds ratio of sonographically suspicious nodules for predicting malignancy was 16.01 (95% confidence interval 2.36-108.54, P = 0.005). Based on sonographic features, surgery can be performed selectively on nodules with two consecutive non-diagnostic cytology results.

  9. Stream-Field Interactions in the Magnetic Accretor AO Piscium

    NASA Astrophysics Data System (ADS)

    Hellier, Coel; van Zyl, Liza

    2005-06-01

    UV spectra of the magnetic accretor AO Psc show absorption features for half the binary orbit. The absorption is unlike the wind-formed features often seen in similar stars. Instead, we attribute it to a fraction of the stream that overflows the impact with the accretion disk. Rapid velocity variations can be explained by changes in the trajectory of the stream depending on the orientation of the white dwarf's magnetic field. Hence, we are directly observing the interaction of an accretion stream with a rotating field. We compare this behavior to that seen in other intermediate polars and in SW Sex stars.

  10. Effects of acoustic- and optical-phonon sidebands on the fundamental optical-absorption edge in crystals and disordered semiconductors

    NASA Astrophysics Data System (ADS)

    Grein, C. H.; John, Sajeev

    1990-04-01

    We present the results of a parameter-free first-principles theory for the fine structure of the Urbach optical-absorption edge in crystalline and disordered semiconductors. The dominant features are recaptured by means of a simple physical argument based on the most probable potential-well analogy. At finite temperatures, the overall linear exponential Urbach behavior of the subgap optical-absorption coefficient is a consequence of multiple LA-phonon emission and absorption sidebands that accompany the electronic transition. The fine structure of subgap absorption spectra observed in some materials is accounted for by multiple TO-, LO-, and TA-phonon absorption and emission sidebands. Good agreement is found with experimental data on crystalline silicon. The effects of nonadiabaticity in the electron-phonon interaction are calculated.

  11. More on the lambda 2800 A 'interstellar extinction' feature

    NASA Astrophysics Data System (ADS)

    McLachlan, A.; Nandy, K.

    1985-02-01

    In a response made to a recent letter by Karim et al. (1984), it is shown that the examples of interstellar absorption at 2800 A that they attribute to proteinaceous material can all be attributed to overexposure of IUE detectors. It is pointed out that stars in the Large Magellanic Cloud show pronounced absorption at 2800 A which cannot be due to interstellar protein since there is no associated absorption at 2200 A; this lack of absorption cannot be due to presence of graphite, whose absorption is weak in the Cloud. The claim by Karim et al. that the spectra of eight stars show 2800 A absorption and that these spectra are saturation-free is considered, and it is shown that data processing problems at IUE ground stations make these spectra unreliable.

  12. Atomic and molecular gas phase spectrometry

    NASA Astrophysics Data System (ADS)

    Winefordner, J. D.

    1985-10-01

    The major goals of this research have been to develop diagnostical spectroscopic methods for measuring spatial/temporal temperatures and species of combustion flames and plasmas and to develop sensitive, selective, precise, reliable, rapid spectrometric methods of trace analysis of elements present in jet engine lubricating oils, metallurgical samples, and engine exhausts. The diagnostical approaches have been based upon the measurement of metal probes introduced into the flame or plasmas and the measurement of OH in flames. The measurement approaches have involved the use of laser-excited fluorescence, saturated absorption, polarization, and linear absorption. The spatial resolution in most studies is less than 1 cu mm and the temporal resolution is less than 10 ns with the use of pulsed lasers. Single pulse temperature and species measurements have also been carried out. Other diagnostical studies have involved the measurement of collisional redistribution of radiatively excited levels of Na and Tl in acetylene/02/Ar flames and the measurement of lifetimes and quantum efficiencies of atoms and ions in the inductively coupled plasmas, ICP. The latter studies indicate that the high electron number densities in ICPs are not efficient quenchers of excited atoms/ions. Temperatures of microwave atmospheric plasmas produced capacitatively and cool metastable N2 discharge produced by a dielectric discharge have also been measured.

  13. Diagnostic value of commercially available shear-wave elastography for breast cancers: integration into BI-RADS classification with subcategories of category 4.

    PubMed

    Youk, Ji Hyun; Gweon, Hye Mi; Son, Eun Ju; Han, Kyung Hwa; Kim, Jeong-Ah

    2013-10-01

    To evaluate the diagnostic performance of shear-wave elastography (SWE) for breast cancer and to determine whether the integration of SWE into BI-RADS with subcategories of category 4 improves the diagnostic performance. A total of 389 breast masses (malignant 120, benign 269) in 324 women who underwent SWE before ultrasound-guided core biopsy or surgery were included. The qualitative SWE feature was assessed using a four-colour overlay pattern. Quantitative elasticity values including the lesion-to-fat elasticity ratio (Eratio) were measured. Diagnostic performance of B-mode ultrasound, SWE, or their combined studies was compared using the area under the ROC curve (AUC). AUC of Eratio (0.952) was the highest among elasticity values (mean, maximum, and minimum elasticity, 0.949, 0.939, and 0.928; P = 0.04) and AUC of colour pattern was 0.947. AUC of combined studies was significantly higher than for a single study (P < 0.0001). When adding SWE to category 4 lesions, lesions were dichotomised according to % of malignancy: 2.1 % vs. 43.2 % (category 4a) and 0 % vs. 100 % (category 4b) for Eratio and 2.4 % vs. 25.8 % (category 4a) for colour pattern (P < 0.05). Shear-wave elastography showed a good diagnostic performance. Adding SWE features to BI-RADS improved the diagnostic performance and may be helpful to stratify category 4 lesions. • Quantitative and qualitative shear-wave elastography provides further diagnostic information during breast ultrasound. • The elasticity ratio (E ratio ) showed the best diagnostic performance in SWE. • E ratio and four-colour overlay pattern significantly differed between benign and malignant lesions. • SWE features allowed further stratification of BI-RADS category 4 lesions.

  14. PAHFIT: Properties of PAH Emission

    NASA Astrophysics Data System (ADS)

    Smith, J. D.; Draine, Bruce

    2012-10-01

    PAHFIT is an IDL tool for decomposing Spitzer IRS spectra of PAH emission sources, with a special emphasis on the careful recovery of ambiguous silicate absorption, and weak, blended dust emission features. PAHFIT is primarily designed for use with full 5-35 micron Spitzer low-resolution IRS spectra. PAHFIT is a flexible tool for fitting spectra, and you can add or disable features, compute combined flux bands, change fitting limits, etc., without changing the code. PAHFIT uses a simple, physically-motivated model, consisting of starlight, thermal dust continuum in a small number of fixed temperature bins, resolved dust features and feature blends, prominent emission lines (which themselves can be blended with dust features), as well as simple fully-mixed or screen dust extinction, dominated by the silicate absorption bands at 9.7 and 18 microns. Most model components are held fixed or are tightly constrained. PAHFIT uses Drude profiles to recover the full strength of dust emission features and blends, including the significant power in the wings of the broad emission profiles. This means the resulting feature strengths are larger (by factors of 2-4) than are recovered by methods which estimate the underlying continuum using line segments or spline curves fit through fiducial wavelength anchors.

  15. High-level intuitive features (HLIFs) for intuitive skin lesion description.

    PubMed

    Amelard, Robert; Glaister, Jeffrey; Wong, Alexander; Clausi, David A

    2015-03-01

    A set of high-level intuitive features (HLIFs) is proposed to quantitatively describe melanoma in standard camera images. Melanoma is the deadliest form of skin cancer. With rising incidence rates and subjectivity in current clinical detection methods, there is a need for melanoma decision support systems. Feature extraction is a critical step in melanoma decision support systems. Existing feature sets for analyzing standard camera images are comprised of low-level features, which exist in high-dimensional feature spaces and limit the system's ability to convey intuitive diagnostic rationale. The proposed HLIFs were designed to model the ABCD criteria commonly used by dermatologists such that each HLIF represents a human-observable characteristic. As such, intuitive diagnostic rationale can be conveyed to the user. Experimental results show that concatenating the proposed HLIFs with a full low-level feature set increased classification accuracy, and that HLIFs were able to separate the data better than low-level features with statistical significance. An example of a graphical interface for providing intuitive rationale is given.

  16. Thermal infrared emission spectroscopy of the pyroxene mineral series

    NASA Astrophysics Data System (ADS)

    Hamilton, Victoria E.

    2000-04-01

    The thermal infrared emissivity spectra of coarse particulate samples of compositions in the pyroxene series display reststrahlen features (absorptions) that distinguish not only orthorhombic from monoclinic structures, but also major end-members within the two structural groups, as well as minerals within solid solution series. The exact number of reststrahlen features observed and their positions are dependent on mineral structure and cation occupancy of the M1 and M2 sites. End-member quadrilateral pyroxenes (Mg2Si2O6-Fe2Si2O6-Ca[Mg,Fe]Si2O6) are easily distinguished from each other and from minerals in the nonquadrilateral series (NaFeSi2O6-Na[Al,Fe]Si2O6-LiAlSi2O6). Furthermore, among quadrilateral pyroxenes, variations in Mg/(Mg+Fe) are linearly correlated with several band locations, as are variations in Ca content in high-Ca clinopyroxenes. In both quadrilateral and nonquadrilateral compositions, Christiansen feature positions are also diagnostic. No correlations with minor constituents (of the order of 0.05 atoms per formula unit) were observed. The detailed spectral characteristics of pyroxenes and their variability as a function of structure and cation occupancy are presented here with determinative curves for the identification of pyroxene composition. These data have important implications for the interpretation of spectral data from both laboratory and remote sensing instruments because they should permit a more detailed determination of pyroxene composition in measured unknown pure mineral and bulk compositions dominated by surface scattering, i.e., all particulates greater than ~65 μm, and solid samples.

  17. ISM DUST GRAINS AND N-BAND SPECTRAL VARIABILITY IN THE SPATIALLY RESOLVED SUBARCSECOND BINARY UY Aur

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Skemer, Andrew J.; Close, Laird M.; Hinz, Philip M.

    2010-03-10

    The 10 {mu}m silicate feature is an essential diagnostic of dust-grain growth and planet formation in young circumstellar disks. The Spitzer Space Telescope has revolutionized the study of this feature, but due to its small (85 cm) aperture, it cannot spatially resolve small/medium-separation binaries ({approx}<3''; {approx}< 420 AU) at the distances of the nearest star-forming regions ({approx}140 pc). Large, 6-10 m ground-based telescopes with mid-infrared instruments can resolve these systems. In this paper, we spatially resolve the 0.''88 binary, UY Aur, with MMTAO/BLINC-MIRAC4 mid-infrared spectroscopy. We then compare our spectra to Spitzer/IRS (unresolved) spectroscopy, and resolved images from IRTF/MIRAC2, Keck/OSCIR,more » and Gemini/Michelle, which were taken over the past decade. We find that UY Aur A has extremely pristine, interstellar medium (ISM)-like grains and that UY Aur B has an unusually shaped silicate feature, which is probably the result of blended emission and absorption from foreground extinction in its disk. We also find evidence for variability in both UY Aur A and UY Aur B by comparing synthetic photometry from our spectra with resolved imaging from previous epochs. The photometric variability of UY Aur A could be an indication that the silicate emission itself is variable, as was recently found in EX Lupi. Otherwise, the thermal continuum is variable, and either the ISM-like dust has never evolved, or it is being replenished, perhaps by UY Aur's circumbinary disk.« less

  18. Optical diagnostics of the arc plasma using fast intensified CCD-spectrograph system

    NASA Astrophysics Data System (ADS)

    Pavelescu, Gabriela; Guillot, Stephane; Braic, Mariana T.; Hong, Dunpin; Pavelescu, D.; Fleurier, Claude; Braic, Viorel; Gherendi, F.; Dumitrescu, G.; Anghelita, P.; Bauchire, J. M.

    2004-10-01

    Spectroscopic diagnostics, using intensified high speed CCD camera, was applied to study the arc dynamics in low voltage circuit breakers, in vacuum and in air. Time-resolved emission spectroscopy of the vacuum arc plasma, generated during electrode separation, provided information about the interruption process. The investigations were focused on the partial unsuccessful interruption around current zero. Absorption spectroscopy, in a peculiar setup, was used in order to determine the metallic atoms densities in the interelectrode space of a low voltage circuit breaker, working in ambient air.

  19. Benign phyllodes tumor with tubular adenoma-like epithelial component in FNAC: A diagnostic pitfall.

    PubMed

    Panda, Kishori M

    2016-01-01

    Benign phyllodes tumor (BPT) is a biphasic neoplasm composed of bland stromal and epithelial elements. Cytologic diagnostic criteria of BPT, though documented in the literature, diagnostic pitfalls in fine-needle aspiration cytology (FNAC) may occur due to sampling error, high cellularity, ductal hyperplasia, paucity of stromal component, and occasional dissociation of epithelial cells. Here, we describe a case of BPT diagnosed by histology in a 19-year-old female, where FNAC features were inconclusive due to paucity of stromal component, predominance of tubular adenoma-like epithelial component, and due to the presence of other overlapping features with fibroadenoma.

  20. The changing purpose of Prader-Willi syndrome clinical diagnostic criteria and proposed revised criteria.

    PubMed

    Gunay-Aygun, M; Schwartz, S; Heeger, S; O'Riordan, M A; Cassidy, S B

    2001-11-01

    Prader-Willi syndrome (PWS) is a complex, multisystem disorder. Its major clinical features include neonatal hypotonia, developmental delay, short stature, behavioral abnormalities, childhood-onset obesity, hypothalamic hypogonadism, and characteristic appearance. The genetic basis of PWS is also complex. It is caused by absence of expression of the paternally active genes in the PWS critical region on 15q11-q13. In approximately 70% of cases this is the result of deletion of this region from the paternal chromosome 15. In approximately 28%, it is attributable to maternal uniparental disomy (UPD; inheritance of 2 copies of a chromosome from the mother and no copies from the father, as opposed to the normal 1 copy from each parent) of chromosome 15, and in <2%, it is the result of a mutation, deletion, or other defect in the imprinting center. Clinical diagnostic criteria were established by consensus in 1993. Subsequently, definitive molecular genetic testing became available for laboratory diagnosis of PWS. However, identification of appropriate patients for testing remains a challenge for most practitioners because many features of the disorder are nonspecific and others can be subtle or evolve over time. For example, hypotonic infants who are still in the failure to thrive phase of the disorder often do not have sufficient features for recognition of PWS and often are not tested. Initial screening with these diagnostic criteria can increase the yield of molecular testing for older children and adults with nonspecific obesity and mental retardation. Therefore, the purpose of clinical diagnostic criteria has shifted from assisting in making the definitive diagnosis to raising diagnostic suspicion, thereby prompting testing. We conducted a retrospective review of patients with PWS confirmed with genetic testing to assess the validity and sensitivity of clinical diagnostic criteria published before the widespread availability of testing for all affected patients and recommend revised clinical criteria. Charts of all 90 patients with laboratory-confirmed PWS were reviewed. For each patient, the presence or absence of the major, minor, and supportive features listed in the published diagnostic criteria was recorded. The sensitivity of each criterion, mean of the total number of major and minor criteria, and mean total score for each patient were calculated. There were 68 patients with a deletion (del 15q11-q13), 21 with maternal UPD of chromosome 15, and 1 with a presumed imprinting defect. Age range at the time of the most recent evaluation was 5 months to 60 years (median: 14.5 years; del median: 14 years; range: 5 months-60 years; UPD median: 18 years; range: 5-42 years). The sensitivities of the major criteria ranged from 49% (characteristic facial features) to 98% (developmental delay). Global developmental delay and neonatal hypotonia were the 2 most consistently positive major criteria and were positive in >97% of the patients. Feeding problems in infancy, excessive weight gain after 1 year, hypogonadism, and hyperphagia were all present in 93% or more of patients. Sensitivities of the minor criteria ranged form 37% (sleep disturbance and apneas) to 93% (speech and articulation defects). Interestingly, the sensitivities of 8 of the minor criteria were higher than the sensitivity of characteristic facial features, which is a major criterion. Fifteen out of 90 patients with molecular diagnosis did not meet the clinical diagnostic criteria retrospectively. When definitive diagnostic testing is not available, as was the case for PWS when the 1993 criteria were developed, diagnostic criteria are important to avoid overdiagnosis and to ensure that diagnostic test development is performed on appropriate samples. When diagnostic testing is available, as is now the case for PWS, diagnostic criteria should serve to raise diagnostic suspicion, ensure that all appropriate people are tested, and avoid the expense of testing unnecessarily. Our results indicate that the sensitivities of most of the published criteria are acceptable. However, 16.7% of patients with molecular diagnosis did not meet the 1993 clinical diagnostic criteria retrospectively, suggesting that the published criteria may be too exclusive. A less strict scoring system may ensure that all appropriate people are tested. Accordingly, we suggest revised clinical criteria to help identify the appropriate patients for DNA testing for PWS. The suggested age groupings are based on characteristic phases of the natural history of PWS. Some of the features (eg, neonatal hypotonia, feeding problems in infancy) serve to diagnose the syndrome in the first few years of life, whereas others (eg, excessive eating) are useful during early childhood. Similarly, hypogonadism is most useful during and after adolescence. Some of the features like neonatal hypotonia and infantile feeding problems are less likely to be missed, whereas others such as characteristic facial features and hypogonadism (especially in prepubertal females) may require more careful and/or expert examination. The issue of who should have diagnostic testing is distinct from the determination of features among confirmed patients. Based on the sensitivities of the published criteria and our experience, we suggest testing all newborns/infants with otherwise unexplained hypotonia with poor suck. For children between 2 and 6 years of age, we consider hypotonia with history of poor suck associated with global developmental delay sufficient criteria to prompt testing. Between 6 and 12 years of age, we suggest testing those with hypotonia (or history of hypotonia with poor suck), global developmental delay, and excessive eating with central obesity (if uncontrolled). At the ages of 13 years and above, we recommend testing patients with cognitive impairment, excessive eating with central obesity (if uncontrolled), and hypogonadotropic hypogonadism and/or typical behavior problems (including temper tantrums and obsessive-compulsive features). Thus, we propose a lower threshold to prompt diagnostic DNA testing, leading to a higher likelihood of diagnosis of this disorder in which anticipatory guidance and intervention can significantly influence outcome.

  1. Visible and near-IR spectral reflectance of geologically important materials: A short review

    NASA Technical Reports Server (NTRS)

    Singer, R. B.

    1982-01-01

    Examples of reflectance spectra are presented and discussed for various mineral groups including pyroxenes, olivene, phylosilicates, amphiboles, feldspars, oxides and hydroxides, carbonates, and mixtures of minerals. The physical sources of some spectral features are also reviewed such as charge transfer and conduction bands, crystal field absorptions, and vibrational absorptions.

  2. Superenhancers: novel opportunities for nanowire optoelectronics.

    PubMed

    Khudiyev, Tural; Bayindir, Mehmet

    2014-12-16

    Nanowires play a crucial role in the development of new generation optoelectronic devices ranging from photovoltaics to photodetectors, as these designs capitalize on the low material usage, utilize leaky-mode optical resonances and possess high conversion efficiencies associated with nanowire geometry. However, their current schemes lack sufficient absorption capacity demanded for their practical applicability, and more efficient materials cannot find widespread usage in these designs due to their rarity and cost. Here we suggest a novel and versatile nanoconcentrator scheme utilizing unique optical features of non-resonant Mie (NRM) scattering regime associated with low-index structures. The scattering regime is highly compatible with resonant Mie absorption effect taking place in nanowire absorbers. This technique in its optimized forms can provide up to 1500% total absorption enhancement, 400-fold material save and is suitable for large-area applications with significant area preservation compared to thin-film of same materials. Proposed superenhancer concept with its exceptional features such as broadband absorption enhancement, polarization immunity and material-independent manner paves the way for development of efficient nanowire photosensors or solar thermophotovoltaic devices and presents novel design opportunities for self-powered nanosystems.

  3. High-resolution, vacuum-ultraviolet absorption spectrum of boron trifluoride

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Hughes, Patrick P.; Thompson, Alan K.; Vest, Robert E.

    2014-11-21

    In the course of investigations of thermal neutron detection based on mixtures of {sup 10}BF{sub 3} with other gases, knowledge was required of the photoabsorption cross sections of {sup 10}BF{sub 3} for wavelengths between 135 and 205 nm. Large discrepancies in the values reported in existing literature led to the absolute measurements reported in this communication. The measurements were made at the SURF III Synchrotron Ultraviolet Radiation Facility at the National Institute of Standards and Technology. The measured absorption cross sections vary from 10{sup −20} cm{sup 2} at 135 nm to less than 10{sup −21} cm{sup 2} in the regionmore » from 165 to 205 nm. Three previously unreported absorption features with resolvable structure were found in the regions 135–145 nm, 150–165 nm, and 190–205 nm. Quantum mechanical calculations, using the TD-B3LYP/aug-cc-pVDZ variant of time-dependent density functional theory implemented in Gaussian 09, suggest that the observed absorption features arise from symmetry-changing adiabatic transitions.« less

  4. Scientific issues and potential remote-sensing requirements for plant biochemical content

    NASA Technical Reports Server (NTRS)

    Peterson, David L.; Hubbard, G. S.

    1992-01-01

    Application of developments in imaging spectrometry to the study of terrestrial ecosystems, which began in 1983, demonstrate the potential to estimate lignin and nitrogen concentrations of plant canopies by remote-sensing techniques. Estimation of these parameters from the first principles of radiative transfer and the interactions of light with plant materials is not presently possible, principally because of lack of knowledge about internal leaf scattering and specific absorption involving biochemical compounds. From the perspective of remote-sensing instrumentation, sensors are needed to support derivative imaging spectroscopy. Biochemical absorption features tend to occur in functional groupings throughout the 1100- to 2500-nm region. Derivative spectroscopy improves the information associated with the weaker, narrower absorption features of biochemical absorption that are superimposed on the strong absolute variations due to foliar biomass, pigments, and leaf water content of plant canopies. Preliminary sensor specifications call for 8-nm bandwidths at 2-nm centers in four spectral regions (about 400 bands total) and a signal-to-noise performance of at least 1000:1 for 20 percent albedo targets in the 2000-nm region.

  5. A data-driven feature extraction framework for predicting the severity of condition of congestive heart failure patients.

    PubMed

    Sideris, Costas; Alshurafa, Nabil; Pourhomayoun, Mohammad; Shahmohammadi, Farhad; Samy, Lauren; Sarrafzadeh, Majid

    2015-01-01

    In this paper, we propose a novel methodology for utilizing disease diagnostic information to predict severity of condition for Congestive Heart Failure (CHF) patients. Our methodology relies on a novel, clustering-based, feature extraction framework using disease diagnostic information. To reduce the dimensionality we identify disease clusters using cooccurence frequencies. We then utilize these clusters as features to predict patient severity of condition. We build our clustering and feature extraction algorithm using the 2012 National Inpatient Sample (NIS), Healthcare Cost and Utilization Project (HCUP) which contains 7 million discharge records and ICD-9-CM codes. The proposed framework is tested on Ronald Reagan UCLA Medical Center Electronic Health Records (EHR) from 3041 patients. We compare our cluster-based feature set with another that incorporates the Charlson comorbidity score as a feature and demonstrate an accuracy improvement of up to 14% in the predictability of the severity of condition.

  6. Characterizing optical properties and spatial heterogeneity of human ovarian tissue using spatial frequency domain imaging

    NASA Astrophysics Data System (ADS)

    Nandy, Sreyankar; Mostafa, Atahar; Kumavor, Patrick D.; Sanders, Melinda; Brewer, Molly; Zhu, Quing

    2016-10-01

    A spatial frequency domain imaging (SFDI) system was developed for characterizing ex vivo human ovarian tissue using wide-field absorption and scattering properties and their spatial heterogeneities. Based on the observed differences between absorption and scattering images of different ovarian tissue groups, six parameters were quantitatively extracted. These are the mean absorption and scattering, spatial heterogeneities of both absorption and scattering maps measured by a standard deviation, and a fitting error of a Gaussian model fitted to normalized mean Radon transform of the absorption and scattering maps. A logistic regression model was used for classification of malignant and normal ovarian tissues. A sensitivity of 95%, specificity of 100%, and area under the curve of 0.98 were obtained using six parameters extracted from the SFDI images. The preliminary results demonstrate the diagnostic potential of the SFDI method for quantitative characterization of wide-field optical properties and the spatial distribution heterogeneity of human ovarian tissue. SFDI could be an extremely robust and valuable tool for evaluation of the ovary and detection of neoplastic changes of ovarian cancer.

  7. Sensitivity of light interaction computer model to the absorption properties of skin

    NASA Astrophysics Data System (ADS)

    Karsten, A. E.; Singh, A.

    2011-06-01

    Light based treatments offer major benefits to patients. Many of the light based treatments or diagnostic techniques need to penetrate the skin to reach the site of interest. Human skin is a highly scattering medium and the melanin in the epidermal layer of the skin is a major absorber of light in the visible and near infrared wavelength bands. The effect of increasing absorption in the epidermis is tested on skin simulating phantoms as well as on a computer model. Changing the absorption coefficient between 0.1 mm-1 and 1.0 mm-1 resulted in a decrease of light reaching 1 mm into the sample. Transmission through a 1 mm thick sample decreased from 48% to 13% and from 31% to 2% for the different scattering coefficients.

  8. Dark matter in the outer solar system

    NASA Technical Reports Server (NTRS)

    Owen, T.; Cruikshank, D.; De Bergh, C.; Geballe, T.

    1994-01-01

    There are now a large number of small bodies in the outer solar system that are known to be covered with dark material. Attempts to identify that material have been thwarted by the absence of discrete absorption features in the reflection spectra of these planetesimals. An absorption at 2.2 micrometers that appeared to be present in several objects has not been confirmed by new observations. Three absorptions in the spectrum of the unusually red planetesimal 5145 Pholus are well-established, but their identity remains a mystery.

  9. 21 CFR 868.1430 - Carbon monoxide gas analyzer.

    Code of Federal Regulations, 2011 CFR

    2011-04-01

    ... techniques such as infrared absorption or gas chromatography. (b) Classification. Class II (performance... 21 Food and Drugs 8 2011-04-01 2011-04-01 false Carbon monoxide gas analyzer. 868.1430 Section 868...) MEDICAL DEVICES ANESTHESIOLOGY DEVICES Diagnostic Devices § 868.1430 Carbon monoxide gas analyzer. (a...

  10. 21 CFR 868.1430 - Carbon monoxide gas analyzer.

    Code of Federal Regulations, 2010 CFR

    2010-04-01

    ... techniques such as infrared absorption or gas chromatography. (b) Classification. Class II (performance... 21 Food and Drugs 8 2010-04-01 2010-04-01 false Carbon monoxide gas analyzer. 868.1430 Section 868...) MEDICAL DEVICES ANESTHESIOLOGY DEVICES Diagnostic Devices § 868.1430 Carbon monoxide gas analyzer. (a...

  11. Improved heuristics for early melanoma detection using multimode hyperspectral dermoscopy (Conference Presentation)

    NASA Astrophysics Data System (ADS)

    Vasefi, Fartash; MacKinnon, Nicholas B.; Booth, Nicholas; Farkas, Daniel L.

    2017-02-01

    Purpose: To determine the performance of a multimode dermoscopy system (SkinSpect) designed to quantify and 3-D map in vivo melanin and hemoglobin concentrations in skin and its melanoma scoring system, and compare the results accuracy with SIAscopy, and histopathology. Methods: A multimode imaging dermoscope is presented that combines polarization, fluorescence and hyperspectral imaging to accurately map the distribution of skin melanin, collagen and hemoglobin in pigmented lesions. We combine two depth-sensitive techniques: polarization, and hyperspectral imaging, to determine the spatial distribution of melanin and hemoglobin oxygenation in a skin lesion. By quantifying melanin absorption in pigmented areas, we can also more accurately estimate fluorescence emission distribution mainly from skin collagen. Results and discussion: We compared in vivo features of melanocytic lesions (N = 10) extracted by non-invasive SkinSpect and SIMSYS-MoleMate SIAscope, and correlate them to pathology report. Melanin distribution at different depths as well as hemodynamics including abnormal vascularity we detected will be discussed. We will adapt SkinSpect scoring with ABCDE (asymmetry , border, color, diameter, evolution) and seven point dermatologic checklist including: (1) atypical pigment network, (2) blue-whitish veil, (3) atypical vascular pattern, (4) irregular streaks, (5) irregular pigmentation, (6) irregular dots and globules, (7) regression structures estimated by dermatologist. Conclusion: Distinctive, diagnostic features seen by SkinSpect in melanoma vs. normal pigmented lesions will be compared by SIAscopy and results from histopathology.

  12. On the Formation of Interstellar Water Ice: Constraints from a Search for Hydrogen Peroxide Ice in Molecular Clouds

    NASA Technical Reports Server (NTRS)

    Smith, R. G.; Charnely, S. B.; Pendleton, Y. J.; Wright, C. M.; Maldoni, M. M.; Robinson, G.

    2011-01-01

    Recent surface chemistry experiments have shown that the hydrogenation of molecular oxygen on interstellar dust grains is a plausible formation mechanism, via hydrogen peroxide (H2O2), for the production of water (H2O) ice mantles in the dense interstellar medium. Theoretical chemistry models also predict the formation of a significant abundance of H2O2 ice in grain mantles by this route. At their upper limits, the predicted and experimental abundances are sufficiently high that H2O2 should be detectable in molecular cloud ice spectra. To investigate this further, laboratory spectra have been obtained for H2O2/H2O ice films between 2.5 and 200 micron, from 10 to 180 K, containing 3%, 30%, and 97% H2O2 ice. Integrated absorbances for all the absorption features in low-temperature H2O2 ice have been derived from these spectra. For identifying H2O2 ice, the key results are the presence of unique features near 3.5, 7.0, and 11.3 micron. Comparing the laboratory spectra with the spectra of a group of 24 protostars and field stars, all of which have strong H2O ice absorption bands, no absorption features are found that can definitely be identified with H2O2 ice. In the absence of definite H2O2 features, the H2O2 abundance is constrained by its possible contribution to the weak absorption feature near 3.47 micron found on the long-wavelength wing of the 3 micron H2O ice band. This gives an average upper limit for H2O2, as a percentage of H2O, of 9% +/- 4%. This is a strong constraint on parameters for surface chemistry experiments and dense cloud chemistry models.

  13. 12 years of Phobos observations by Omega and Spicam on board MEX

    NASA Astrophysics Data System (ADS)

    Gondet, Brigitte; Bertaux, Jean-Loup; Omega Team, Spicam Team

    2016-10-01

    Mars Express made several encounters with Phobos and a few with Deimos since 2004. Observations with SPICAM and OMEGA imaging spectrometers on board Mars Express covers the range from UV (110-312 nm) to visible and mid IR up to 5 µm. In the following we consider the ultraviolet (UV) channel of SPICAM and only the visible channel of OMEGA and its small UV extension down to 390 nm, in order to compare with SPICAM. Preliminary results were presented already in the past [1]. Since then, a more detailed analysis was carried out, subtracting some internally scattered light affecting the SPICAM UV retrieved reflectance.The combined spectrum of Radiance Factor from SPICAM and OMEGA suggests the presence of a deep absorption feature. Both instruments, taken separately, support also this absorption feature.In the visible part of CRISM [2] on board MRO and recently confirmed by Omega, one feature is centered at 0.65 µm, with an absorption depth varying from 0 to 4%, an other one is centered at 2.8µm. These two Visible IR features were interpreted [2] either to highly desiccated Fe-phyllosilicate minerals indigenous to the bodies, or to a surface process involving Rayleigh scattering and absorption of small iron particles formed by exogenic space weathering processing.In this rather uncertain situation, the UV band detected by SPICAM and OMEGA on board Mars Express is of great importance to attempt discriminating between the two scenarios proposed above to explain the Visible-IR reflectance spectra of Phobos.[1] Bertaux J.L. et al. (2011) EPSC/DPS conference abstract, Nantes, November 2011. [[2] Freaman A.A. et al. (2014) Icarus, 229 , 196-205.

  14. UV-Visible reflectance of Phobos from SPICAM and OMEGA and comparison with Deimos

    NASA Astrophysics Data System (ADS)

    Gondet, Brigitte; Bertaux, Jean-Loup; Montmessin, Franck; Reberarc, Aurelie

    2016-04-01

    Mars Express made several encounters with Phobos and a few with Deimos since 2004. Observations with SPICAM and OMEGA imaging spectrometers on board Mars Express covers the range from UV (110-312 nm) to visible and mid IR up to 5 μm. In the following we consider the ultraviolet (UV) channel of SPICAM and only the visible channel of OMEGA and its small UV extension down to 390 nm, in order to compare with SPICAM. Preliminary results were presented already in the past [1]. Since then, a more detailed analysis was carried out, subtracting some internally scattered light affecting the SPICAM UV retrieved reflectance. The combined spectrum of Radiance Factor from SPICAM and OMEGA suggests the presence of a deep absorption feature. Both instruments, taken separately, support also this absorption feature. In the visible part of CRISM [2] on board MRO, one feature is centered at 0.65 μm, with an absorption depth varying from 0 to 4%, an other one is centered at 2.8μm. These two Visible IR features were interpreted [2] either to highly desiccated Fe-phyllosilicate minerals indigenous to the bodies, or to a surface process involving Rayleigh scattering and absorption of small iron particles formed by exogenic space weathering processing. In this rather uncertain situation, the UV band detected by SPICAM and OMEGA on board Mars Express is of great importance to attempt discriminating between the two scenarios proposed above to explain the Visible-IR reflectance spectra of Phobos. [1] Bertaux J.L. et al. (2011) EPSC/DPS conference abstract, Nantes, November 2011, [5] Freaman A.A. et al. (2014) Icarus, 229 , 196-205.

  15. TIME-VARIABLE ALUMINUM ABSORPTION IN THE POLAR AR URSAE MAJORIS, AND AN UPDATED ESTIMATE FOR THE MASS OF THE WHITE DWARF

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Bai, Yu; Justham, Stephen; Liu, JiFeng

    2016-09-01

    We present spectra of the extreme polar AR Ursae Majoris (AR UMa), which display a clear Al i absorption doublet, alongside spectra taken less than a year earlier in which that feature is not present. Re-examination of earlier SDSS spectra indicates that the Al i absorption doublet was also present ≈8 years before our first non-detection. We conclude that this absorbing material is unlikely to be on the surface of either the white dwarf (WD) or the donor star. We suggest that this Al i absorption feature arises in circumstellar material, perhaps produced by the evaporation of asteroids as theymore » approach the hot WD. The presence of any remaining reservoir of rocky material in AR UMa might help to constrain the prior evolution of this unusual binary system. We also apply spectral decomposition to find the stellar parameters of the M dwarf companion, and attempt to dynamically measure the mass of the WD in AR UMa by considering both the radial velocity curves of the H {sub β} emission line and the Na i absorption line. Thereby we infer a mass range for the WD in AR UMa of 0.91 M {sub ⊙} < M {sub WD} < 1.24 M {sub ⊙}.« less

  16. Time-variable Aluminum Absorption in the Polar AR Ursae Majoris, and an Updated Estimate for the Mass of the White Dwarf

    NASA Astrophysics Data System (ADS)

    Bai, Yu; Justham, Stephen; Liu, JiFeng; Guo, JinCheng; Gao, Qing; Gong, Hang

    2016-09-01

    We present spectra of the extreme polar AR Ursae Majoris (AR UMa), which display a clear Al I absorption doublet, alongside spectra taken less than a year earlier in which that feature is not present. Re-examination of earlier SDSS spectra indicates that the Al I absorption doublet was also present ≈8 years before our first non-detection. We conclude that this absorbing material is unlikely to be on the surface of either the white dwarf (WD) or the donor star. We suggest that this Al I absorption feature arises in circumstellar material, perhaps produced by the evaporation of asteroids as they approach the hot WD. The presence of any remaining reservoir of rocky material in AR UMa might help to constrain the prior evolution of this unusual binary system. We also apply spectral decomposition to find the stellar parameters of the M dwarf companion, and attempt to dynamically measure the mass of the WD in AR UMa by considering both the radial velocity curves of the H β emission line and the Na I absorption line. Thereby we infer a mass range for the WD in AR UMa of 0.91 M ⊙ < M WD < 1.24 M ⊙.

  17. Optical Hydrogen Absorption Consistent with a Thin Bow Shock Leading the Hot Jupiter HD 189733b

    NASA Astrophysics Data System (ADS)

    Cauley, P. Wilson; Redfield, Seth; Jensen, Adam G.; Barman, Travis; Endl, Michael; Cochran, William D.

    2015-09-01

    Bow shocks are ubiquitous astrophysical phenomena resulting from the supersonic passage of an object through a gas. Recently, pre-transit absorption in UV metal transitions of the hot Jupiter (HJ) exoplanets HD 189733b and WASP12-b have been interpreted as being caused by material compressed in a planetary bow shock. Here we present a robust detection of a time-resolved pre-transit, as well as in-transit absorption signature around the HJ exoplanet HD 189733b using high spectral resolution observations of several hydrogen Balmer lines. The line shape of the pre-transit feature and the shape of the timeseries absorption provide the strongest constraints on the morphology and physical characteristics of extended structures around an exoplanet. The in-transit measurements confirm the previous exospheric Hα detection, although the absorption depth measured here is ∼50% lower. The pre-transit absorption feature occurs 125 minutes before the predicted optical transit, a projected linear distance from the planet to the stellar disk of 7.2 Rp. The absorption strength observed in the Balmer lines indicates an optically thick, but physically small, geometry. We model this signal as the early ingress of a planetary bow shock. If the bow shock is mediated by a planetary magnetosphere, the large standoff distance derived from the model suggests a large planetary magnetic field strength of Beq = 28 G. Better knowledge of exoplanet magnetic field strengths is crucial to understanding the role these fields play in planetary evolution and the potential development of life on planets in the habitable zone.

  18. Changes in the Far UV Spectrum of Eta Carinae Near the 2003 Minimum

    NASA Technical Reports Server (NTRS)

    Iping, R. C.; Gull, T. R.; Sonneborn, G.; Massa, D.; Vieira, G. L.; Nielsen, K. E.

    2004-01-01

    High resolution 905-1180 spectra of \\eta Carinae have been obtained with the Far Ultraviolet Spectroscopic Explorer (FUSE) satellite at nine epochs between February 2000 and June 2003 . This period of time extends from the broad maximum up to the very beginning of the minimum of the 5.52-year period initially discovered by A. Damineli. The flux levels were unchanged between February 2000 through February 2003 with minor spectral differences. The X-Ray minimum started on June 29, 2003 . Three observations were accomplished on June 10, June 17 and June 27 leading up to the minimum. Substantial changes were present in the June 10 and June 17 spectra, but a very significant change occurred by June 27, 2003. Longward of 1100A, the overall flux dropped 10 to 30 %. Shortward of 1100A, there are spectral intervals with NO decrease in flux even down to the shortest wavelengths (920--950 ). This indicates that dust absorption has a negligible role in the observed spectral changes and that line absorptions play a major role. Throughout the spectrum there are intervals ranging in width of 3-10A with strong increased absorption. Significant absorptions may be associated with the red portion of the following stellar wind lines: C III 977, O VI 1031,1037, P V 1117, while other absorption features are much broader, more extended and not clearly associated with well-known spectral transitions. Given the complexity of the STIS echelle spectra taken in this period of time, many of these absorption features are likely due to multiple absorption lines

  19. Mg I absorption features in the solar spectrum near 9 and 12 microns

    NASA Technical Reports Server (NTRS)

    Glenar, David A.; Reuter, Dennis C.; Deming, Drake; Chang, Edward S.

    1988-01-01

    High-resolution FTS observations from the Kitt Peak National Solar Observatory and the Spacelab 3 ATMOS experiment have revealed additional infrared transitions due to Mg I in the spectra of both quiet sun and sunspot penumbra. In contrast to previous observations, these transitions are seen in absorption, not emission. Absorption intensities range from 1 to 7 percent of the continuum in the quiet sun. In the penumbra, the same features appear to show Zeeman splitting. Modeling of the line profiles in the photospheric spectrum shows evidence for a factor of three overabundance in the n = 5 or more levels of Mg I in the upper photosphere, but with no deviations from a Planck source function. It is concluded that whatever the process that produces the emission (including the Lemke and Holweger mechanism), it must occur well above the tau(5000) = 0.01 level.

  20. Tunable evolutions of shock absorption and energy partitioning in magnetic granular chains

    NASA Astrophysics Data System (ADS)

    Leng, Dingxin; Liu, Guijie; Sun, Lingyu

    2018-01-01

    In this paper, we investigate the tunable characteristics of shock waves propagating in one-dimensional magnetic granular chains at various chain lengths and magnetic flux densities. According to the Hertz contact theory and Maxwell principle, a discrete element model with coupling elastic and field-induced interaction potentials of adjacent magnetic grains is proposed. We also present hard-sphere approximation analysis to describe the energy partitioning features of magnetic granular chains. The results demonstrate that, for a fixed magnetic field strength, when the chain length is greater than two times of the wave width of the solitary wave, the chain length has little effect on the output energy of the system; for a fixed chain length, the shock absorption and energy partitioning features of magnetic granular chains are remarkably influenced by varying magnetic flux densities. This study implies that the magnetic granular chain is potential to construct adaptive shock absorption components for impulse mitigation.

  1. Differential absorption lidar observation on small-time-scale features of water vapor in the atmospheric boundary layer

    NASA Astrophysics Data System (ADS)

    Kong, Wei; Li, Jiatang; Liu, Hao; Chen, Tao; Hong, Guanglie; Shu, Rong

    2017-11-01

    Observation on small-time-scale features of water vapor density is essential for turbulence, convection and many other fast atmospheric processes study. For the high signal-to-noise signal of elastic signal acquired by differential absorption lidar, it has great potential for all-day water vapor turbulence observation. This paper presents a set of differential absorption lidar at 935nm developed by Shanghai Institute of Technical Physics of the Chinese Academy of Science for water vapor turbulence observation. A case at the midday is presented to demonstrate the daytime observation ability of this system. "Autocovariance method" is used to separate the contribution of water vapor fluctuation from random error. The results show that the relative error is less than 10% at temporal and spatial resolution of 10 seconds and 60 meters in the ABL. This indicate that the system has excellent performance for daytime water vapor turbulence observation.

  2. Discovery of very high velocity outflow in V Hydra - Wind from an accretion disk in a binary?

    NASA Technical Reports Server (NTRS)

    Sahai, R.; Wannier, P. G.

    1988-01-01

    High-resolution observations of lines from the CO v = 1-0 vibration-rotation band at 4.6 microns, taken with the FTS/KPNO 4-m telescope, are reported for the carbon-rich red giant V Hydra, which is surrounded by an extended expanding molecular envelope resulting from extensive mass loss. The spectrum shows, in addition to the expected absorption at the outflow velocity of the envelope, absorption extending up to 120 km/s bluewards of the stellar velocity. A comparison of the spectrum observed at two epochs shows that the high-velocity absorption features change with time. It is suggested that the observed high-velocity features in V Hydra arise in a high-velocity polar outflow from an accretion disk in a binary system, as proposed in the mass-loss model for bipolar envelopes by Morris (1988).

  3. Fine-scale structure in the -185 kilometers per second absorption by HCO(+) in the Galactic center

    NASA Technical Reports Server (NTRS)

    Marr, Jonathan M.; Rudolph, Alexander L.; Pauls, Thomas A.; Wright, Melvyn C. H.; Backer, Donald C.

    1992-01-01

    We present a high-resolution study of the HCO(+) (J = 1-0) absorption by the 'high-velocity gas' at velocities between -170 and -200 km/s in Sgr A West. The absorption against the continuum radiation from the ionized gas features in Sgr A West (in particular the 'bar') is stronger than it is against Sgr A which is separated from the ionized gas by a few arcseconds. The positions of peak HCO(+) opacity coincide with the positions of Ne II emission at these velocities. These observations suggest that, even though emission is detected from gas at these high velocities over several arcminutes, some of the absorbing molecular gas may be mixed in with the ionized gas close to Sgr A. Simple calculations show that sufficient shielding can exist in the ionized features to allow molecules to survive very close to the ionizing source.

  4. Cold atomic hydrogen in the inner galaxy

    NASA Technical Reports Server (NTRS)

    Dickey, J. M.; Garwood, R. W.

    1986-01-01

    The VLA is used to measure 21 cm absorption in directions with the absolute value of b less than 1 deg., the absolute value of 1 less than 25 deg. to probe the cool atomic gas in the inner galaxy. Abundant H I absorption is detected; typical lines are deep and narrow, sometimes blending in velocity with adjacent features. Unlike 21 cm emission not all allowed velocities are covered: large portions of the l-v diagram are optically thin. Although not similar to H I emission, the absorption shows a striking correspondence with CO emission in the inner galaxy: essentially every strong feature detected in one survey is seen in the other. The provisional conclusion is that in the inner galaxy most cool atomic gas is associated with molecular cloud complexes. There are few or no cold atomic clouds devoid of molecules in the inner galaxy, although these are common in the outer galaxy.

  5. A Statistical Approach to Exoplanetary Molecular Spectroscopy Using Spitzer Eclipses

    NASA Astrophysics Data System (ADS)

    Deming, Drake; Garhart, Emily; Burrows, Adam; Fortney, Jonathan; Knutson, Heather; Todorov, Kamen

    2018-01-01

    Secondary eclipses of exoplanets observed using the Spitzer Space Telescope measure the total emission emergent from exoplanetary atmospheres integrated over broad photometric bands. Spitzer photometry is excellent for measuring day side temperatures, but is less well suited to the detection of molecular absorption or emission features. Even for very hot exoplanets, it can be difficult to attain the accuracy on eclipse depth that is needed to unambiguously interpret the Spitzer results in terms of molecular absorption or emission. However, a statistical approach, wherein we seek deviations from a simple blackbody planet as a function of the planet's equilibrium temperature, shows promise for defining the nature and strength of molecular absorption in ensembles of planets. In this paper, we explore such an approach using secondary eclipses observed for tens of hot exoplanets during Spitzer's Cycles 10, 12, and 13. We focus on the possibility that the hottest planets exhibit molecular features in emission, due to temperature inversions.

  6. Tailored Algorithm for Sensitivity Enhancement of Gas Concentration Sensors Based on Tunable Laser Absorption Spectroscopy.

    PubMed

    Vargas-Rodriguez, Everardo; Guzman-Chavez, Ana Dinora; Baeza-Serrato, Roberto

    2018-06-04

    In this work, a novel tailored algorithm to enhance the overall sensitivity of gas concentration sensors based on the Direct Absorption Tunable Laser Absorption Spectroscopy (DA-ATLAS) method is presented. By using this algorithm, the sensor sensitivity can be custom-designed to be quasi constant over a much larger dynamic range compared with that obtained by typical methods based on a single statistics feature of the sensor signal output (peak amplitude, area under the curve, mean or RMS). Additionally, it is shown that with our algorithm, an optimal function can be tailored to get a quasi linear relationship between the concentration and some specific statistics features over a wider dynamic range. In order to test the viability of our algorithm, a basic C 2 H 2 sensor based on DA-ATLAS was implemented, and its experimental measurements support the simulated results provided by our algorithm.

  7. Pre-Assembly of Near-Infrared Fluorescent Multivalent Molecular Probes for Biological Imaging.

    PubMed

    Peck, Evan M; Battles, Paul M; Rice, Douglas R; Roland, Felicia M; Norquest, Kathryn A; Smith, Bradley D

    2016-05-18

    A programmable pre-assembly method is described and shown to produce near-infrared fluorescent molecular probes with tunable multivalent binding properties. The modular assembly process threads one or two copies of a tetralactam macrocycle onto a fluorescent PEGylated squaraine scaffold containing a complementary number of docking stations. Appended to the macrocycle periphery are multiple copies of a ligand that is known to target a biomarker. The structure and high purity of each threaded complex was determined by independent spectrometric methods and also by gel electrophoresis. Especially helpful were diagnostic red-shift and energy transfer features in the absorption and fluorescence spectra. The threaded complexes were found to be effective multivalent molecular probes for fluorescence microscopy and in vivo fluorescence imaging of living subjects. Two multivalent probes were prepared and tested for targeting of bone in mice. A pre-assembled probe with 12 bone-targeting iminodiacetate ligands produced more bone accumulation than an analogous pre-assembled probe with six iminodiacetate ligands. Notably, there was no loss in probe fluorescence at the bone target site after 24 h in the living animal, indicating that the pre-assembled fluorescent probe maintained very high mechanical and chemical stability on the skeletal surface. The study shows how this versatile pre-assembly method can be used in a parallel combinatorial manner to produce libraries of near-infrared fluorescent multivalent molecular probes for different types of imaging and diagnostic applications, with incremental structural changes in the number of targeting groups, linker lengths, linker flexibility, and degree of PEGylation.

  8. How Do Gut Feelings Feature in Tutorial Dialogues on Diagnostic Reasoning in GP Traineeship?

    ERIC Educational Resources Information Center

    Stolper, C. F.; Van de Wiel, M. W. J.; Hendriks, R. H. M.; Van Royen, P.; Van Bokhoven, M. A.; Van der Weijden, T.; Dinant, G. J.

    2015-01-01

    Diagnostic reasoning is considered to be based on the interaction between analytical and non-analytical cognitive processes. Gut feelings, a specific form of non-analytical reasoning, play a substantial role in diagnostic reasoning by general practitioners (GPs) and may activate analytical reasoning. In GP traineeships in the Netherlands, trainees…

  9. Io's Thermal Regions and Non-SO2 Spectral Features

    NASA Technical Reports Server (NTRS)

    Smythe, W. D.; Soderblom, L. A.; Lopes, R. M. C.

    2003-01-01

    Several absorptions have been identified in the Galileo NIMS spectra of Io that are not related to SO2. [1,2]. These absorptions have band centers at 2.97, 3.15, 3.85, and 3.91 microns. There are also broad absorptions in the regions 1-1.3 and 3- 3.4 microns. Patterning noise in wavelength registration, arising from the pushbroom imaging and grating motion of the NIMS instrument have previously inhibited reliable mapping of weak absorptions. Recent improvements in techniques to remove the coherent pattern noise from the NIMS dataset have been made by Soderblom. This greatly improves the signal to noise ratio and enables mapping of weak spectral signatures such as the 3.15 micron absorption on Io.

  10. Charge transfer effects, thermo and photochromism in single crystal CVD synthetic diamond.

    PubMed

    Khan, R U A; Martineau, P M; Cann, B L; Newton, M E; Twitchen, D J

    2009-09-09

    We report on the effects of thermal treatment and ultraviolet irradiation on the point defect concentrations and optical absorption profiles of single crystal CVD synthetic diamond. All thermal treatments were below 850 K, which is lower than the growth temperature and unlikely to result in any structural change. UV-visible absorption spectroscopy measurements showed that upon thermal treatment (823 K), various broad absorption features diminished: an absorption band at 270 nm (used to deduce neutral single substitutional nitrogen (N(S)(0)) concentrations) and also two broad features centred at approximately 360 and 520 nm. Point defect centre concentrations as a function of temperature were also deduced using electron paramagnetic resonance (EPR) spectroscopy. Above ∼500 K, we observed a decrease in the concentration of N(S)(0) centres and a concomitant increase in the negatively charged nitrogen-vacancy-hydrogen (NVH) complex (NVH(-)) concentration. Both transitions exhibited an activation energy between 0.6 and 1.2 eV, which is lower than that for the N(S)(0) donor (∼1.7 eV). Finally, it was found that illuminating samples with intense short-wave ultraviolet light recovered the N(S)(0) concentration and also the 270, 360 and 520 nm absorption features. From these results, we postulate a valence band mediated charge transfer process between NVH and single nitrogen centres with an acceptor trap depth for NVH of 0.6-1.2 eV. Because the loss of N(S)(0) concentration is greater than the increase in NVH(-) concentration we also suggest the presence of another unknown acceptor existing at a similar energy to NVH. The extent to which the colour in CVD synthetic diamond is dependent on prior history is discussed.

  11. Far Ultraviolet Spectroscopy of Saturn's Icy Moon Rhea

    NASA Astrophysics Data System (ADS)

    Elowitz, Mark; Hendrix, Amanda; Mason, Nigel J.; Sivaraman, Bhalamurugan

    2018-01-01

    We present an analysis of spatially resolved, far-UV reflectance spectra of Saturn’s icy satellite Rhea, collected by the Cassini Ultraviolet Imaging Spectrograph (UVIS). In recent years ultraviolet spectroscopy has become an important tool for analysing the icy satellites of the outer solar system (1Hendrix & Hansen, 2008). Far-UV spectroscopy provides unique information about the molecular structure and electronic transitions of chemical species. Many molecules that are suspected to be present in the icy surfaces of moons in the outer solar system have broad absorption features due to electronic transitions that occur in the far-UV portion of the spectrum. The studies show that Rhea, like the other icy satellites of the Saturnian system are dominated by water-ice as evident by the 165-nm absorption edge, with minor UV absorbing contaminants. Far-UV spectra of several Saturnian icy satellites, including Rhea and Dione, show an unexplained weak absorption feature centered near 184 nm. To carry out the geochemical survey of Rhea’s surface, the UVIS observations are compared with vacuum-UV spectra of thin-ice samples measured in laboratory experiments. Thin film laboratory spectra of water-ice and other molecular compounds in the solid phase were collected at near-vacuum conditions and temperatures identical to those at the surface of Rhea. Comparison between the observed far-UV spectra of Rhea’s surface ice and modelled spectra based on laboratory absorption measurements of different non-water-ice compounds show that two possible chemical compounds could explain the 184-nm absorption feature. The two molecular compounds include simple chlorine molecules and hydrazine monohydrate. Attempts to explain the source(s) of these compounds on Rhea and the scientific implications of their possible discovery will be summarized.[1] Hendrix, A. R. & Hansen, C. J. (2008). Icarus, 193, pp. 323-333.

  12. Diagnostic performance and useful findings of ultrasound re-evaluation for patients with equivocal CT features of acute appendicitis.

    PubMed

    Kim, Mi Sung; Kwon, Heon-Ju; Kang, Kyung A; Do, In-Gu; Park, Hee-Jin; Kim, Eun Young; Hong, Hyun Pyo; Choi, Yoon Jung; Kim, Young Hwan

    2018-02-01

    To evaluate the diagnostic performance of ultrasound and to determine which ultrasound findings are useful to differentiate appendicitis from non-appendicitis in patients who underwent ultrasound re-evaluation owing to equivocal CT features of acute appendicitis. 62 patients who underwent CT examinations for suspected appendicitis followed by ultrasound re-evaluation owing to equivocal CT findings were included. Equivocal CT findings were considered based on the presence of only one or two findings among the CT criteria, and ultrasound re-evaluation was done based on a predefined structured report form. The diagnostic performance of ultrasound and independent variables to discriminate appendicitis from non-appendicitis were assessed. There were 27 patients in the appendicitis group. The overall diagnostic performance of ultrasound re-evaluation was sensitivity of 96.3%, specificity of 91.2% and accuracy of 91.9%. In terms of the performance of individual ultrasound findings, probe-induced tenderness showed the highest accuracy (86.7%) with sensitivity of 74% and specificity of 97%, followed by non-compressibility (accuracy 71.7%, sensitivity 85.2% and specificity 60.6%). The independent ultrasound findings for discriminating appendicitis were non-compressibility (p = 0.002) and increased flow on the appendiceal wall (p = 0.001). Ultrasound re-evaluation can be used to improve diagnostic accuracy in cases with equivocal CT features for diagnosing appendicitis. The presence of non-compressibility and increased vascular flow on the appendix wall are useful ultrasound findings to discriminate appendicitis from non-appendicitis. Advances in knowledge: Ultrasound re-evaluation is useful to discriminate appendicitis from non-appendicitis when CT features are inconclusive.

  13. Comment on "Hydrogen Balmer beta: The separation between line peaks for plasma electron density diagnostics and self-absorption test"

    NASA Astrophysics Data System (ADS)

    Gautam, Ghaneshwar; Surmick, David M.; Parigger, Christian G.

    2015-07-01

    In this letter, we present a brief comment regarding the recently published paper by Ivković et al., J Quant Spectrosc Radiat Transf 2015;154:1-8. Reference is made to previous experimental results to indicate that self absorption must have occurred; however, when carefully considering error propagation, both widths and peak-separation predict electron densities within the error margins. Yet the diagnosis method and the presented details on the use of the hydrogen beta peak separation are viewed as a welcomed contribution in studies of laser-induced plasma.

  14. Near-Earth and near-Mars asteroids: Prognosis of pyroxene types

    NASA Technical Reports Server (NTRS)

    Shestopalov, D. I.; Golubeva, L. F.

    1991-01-01

    The diagnostic signs of ferrous absorption band at 505nm and color index (u-x) found at main-belt asteroids and 6-parametric classification of light stone meteorites have been the basis of the work. The colorimetric data of light near-Earth and near-Mars asteroids from TRIAD and ECAS were analyzed. Composition fields of pyroxenes were obtained for these asteroids by the value of (u-x) and 505-nm ferrous absorption band position within the pyroxenes quadrilateral. Pyroxenes of the S-asteroids from Apollo-Amor which have spectral parameters similar to achondrites may be presented by the diopside series.

  15. Optical spectroscopy of interplanetary dust collected in the earth's stratosphere

    NASA Technical Reports Server (NTRS)

    Fraundorf, P.; Patel, R. I.; Shirck, J.; Walker, R. M.; Freeman, J. J.

    1980-01-01

    Optical absorption spectra of interplanetary dust particles 2-30 microns in size collected in the atmosphere at an altitude of 20 km by inertial impactors mounted on NASA U-2 aircraft are reported. Fourier transform absorption spectroscopy of crushed samples of the particles reveals a broad feature in the region 1300-800 kaysers which has also been found in meteorite and cometary dust spectra, and a weak iron crystal field absorption band at approximately 9800 kaysers, as is observed in meteorites. Work is currently in progress to separate the various components of the interplanetary dust particles in order to evaluate separately their contributions to the absorption.

  16. Semiconductor meta-surface based perfect light absorber

    NASA Astrophysics Data System (ADS)

    Liu, Guiqiang; Nie, Yiyou; Fu, Guolan; Liu, Xiaoshan; Liu, Yi; Tang, Li; Liu, Zhengqi

    2017-04-01

    We numerically proposed and demonstrated a semiconductor meta-surface light absorber, which consists of a silicon patches array on a silicon thin-film and an opaque silver substrate. The Mie resonances of the silicon patches and the fundamental cavity mode of the ultra-thin silicon film couple strongly to the incident optical field, leading to a multi-band perfect absorption. The maximal absorption is above 99.5% and the absorption is polarization-independent. Moreover, the absorption behavior is scalable in the frequency region via tuning the structural parameters. These features hold the absorber platform with wide applications in optoelectronics such as hot-electron excitation and photo-detection.

  17. A search for formic acid in the upper troposphere - A tentative identification of the 1105-per cm nu-6 band Q branch in high-resolution balloon-borne solar absorption spectra

    NASA Technical Reports Server (NTRS)

    Goldman, A.; Murcray, F. H.; Murcray, D. G.; Rinsland, C. P.

    1984-01-01

    Infrared solar absorption spectra recorded at 0.02-per cm resolution during a balloon flight from Alamogordo, NM (33 deg N), on March 23, 1981, have been analyzed for the possible presence of absorption by formic acid (HCOOH). An absorption feature at 1105 per cm has been tentatively identified in upper tropospheric spectra as due to the nu-6 band Q branch. A preliminary analysis indicates a concentration of about 0.6 ppbv and 0.4 ppbv near 8 and 10 km, respectively.

  18. Development of terahertz otoscope for diagnosing otitis media (Conference Presentation)

    NASA Astrophysics Data System (ADS)

    Jeon, Tae-In; Ji, Young Bin; Bark, Hyeon Sang; Noh, Sam Kyu; Oh, Seung Jae

    2017-03-01

    A novel terahertz (THz) otoscope is designed and fabricated to help physicians to diagnose otitis media (OM) with both THz diagnostics and conventional optical diagnostics. The inclusion of indium tin oxide (ITO) glass in the THz otoscope allows physicians to diagnose OM with both THz and conventional optical diagnostics. To determine THz diagnostics for OM, we observed reflection signals from samples behind a thin dielectric film and found that the presence of water behind the membrane could be distinguished based on THz pulse shape. We verified the potential of this tool for diagnosing OM using mouse skin tissue and a human tympanic membrane samples prior to clinical application. The presence of water absorbed by the human membrane was easily distinguished based on differences in pulse shapes and peak-to-peak amplitudes of reflected THz pulses. The potential for early OM diagnosis using the THz otoscope was confirmed by alteration of THz pulse depending on water absorption level.

  19. Time-varying sodium absorption in the Type Ia supernova 2013gh

    NASA Astrophysics Data System (ADS)

    Ferretti, R.; Amanullah, R.; Goobar, A.; Johansson, J.; Vreeswijk, P. M.; Butler, R. P.; Cao, Y.; Cenko, S. B.; Doran, G.; Filippenko, A. V.; Freeland, E.; Hosseinzadeh, G.; Howell, D. A.; Lundqvist, P.; Mattila, S.; Nordin, J.; Nugent, P. E.; Petrushevska, T.; Valenti, S.; Vogt, S.; Wozniak, P.

    2016-07-01

    Context. Temporal variability of narrow absorption lines in high-resolution spectra of Type Ia supernovae (SNe Ia) is studied to search for circumstellar matter. Time series which resolve the profiles of absorption lines such as Na I D or Ca II H&K are expected to reveal variations due to photoionisation and subsequent recombination of the gases. The presence, composition, and geometry of circumstellar matter may hint at the elusive progenitor system of SNe Ia and could also affect the observed reddening law. Aims: To date, there are few known cases of time-varying Na I D absorption in SNe Ia, all of which occurred during relatively late phases of the supernova (SN) evolution. Photoionisation, however, is predicted to occur during the early phases of SNe Ia, when the supernovae peak in the ultraviolet. We attempt, therefore, to observe early-time absorption-line variations by obtaining high-resolution spectra of SNe before maximum light. Methods: We have obtained photometry and high-resolution spectroscopy of SNe Ia 2013gh and iPTF 13dge, to search for absorption-line variations. Furthermore, we study interstellar absorption features in relation to the observed photometric colours of the SNe. Results: Both SNe display deep Na I D and Ca II H&K absorption features. Furthermore, small but significant variations are detected in a feature of the Na I D profile of SN 2013gh. The variations are consistent with either geometric effects of rapidly moving or patchy gas clouds or photoionisation of Na I gas at R ≈ 1019 cm from the explosion. Conclusions: Our analysis indicates that it is necessary to focus on early phases to detect photoionisation effects of gases in the circumstellar medium of SNe Ia. Different absorbers such as Na I and Ca II can be used to probe for matter at different distances from the SNe. The nondetection of variations during early phases makes it possible to put limits on the abundance of the species at those distances. Full Tables 2 and 3 are only available at the CDS via anonymous ftp to http://cdsarc.u-strasbg.fr (http://130.79.128.5) or via http://cdsarc.u-strasbg.fr/viz-bin/qcat?J/A+A/592/A40

  20. Integrated Theoretical, Computational, and Experimental Studies for Transition Estimation and Control

    DTIC Science & Technology

    2014-06-03

    nozzle exit) was developed to aid in porting the VENOM diagnostic to high-enthalpy impulse tunnels. Measurements were also made in the supersonic high...Colonius T, Fedorov AV. 2009. Alternate designs of ultrasonic absorptive coatings for hypersonic boundary layer control. AIAA Pap. No. 2009-4217 51. Craig

  1. Host Model Uncertainty in Aerosol Radiative Forcing Estimates - The AeroCom Prescribed Experiment

    NASA Astrophysics Data System (ADS)

    Stier, P.; Kinne, S.; Bellouin, N.; Myhre, G.; Takemura, T.; Yu, H.; Randles, C.; Chung, C. E.

    2012-04-01

    Anthropogenic and natural aerosol radiative effects are recognized to affect global and regional climate. However, even for the case of identical aerosol emissions, the simulated direct aerosol radiative forcings show significant diversity among the AeroCom models (Schulz et al., 2006). Our analysis of aerosol absorption in the AeroCom models indicates a larger diversity in the translation from given aerosol radiative properties (absorption optical depth) to actual atmospheric absorption than in the translation of a given atmospheric burden of black carbon to the radiative properties (absorption optical depth). The large diversity is caused by differences in the simulated cloud fields, radiative transfer, the relative vertical distribution of aerosols and clouds, and the effective surface albedo. This indicates that differences in host model (GCM or CTM hosting the aerosol module) parameterizations contribute significantly to the simulated diversity of aerosol radiative forcing. The magnitude of these host model effects in global aerosol model and satellites retrieved aerosol radiative forcing estimates cannot be estimated from the diagnostics of the "standard" AeroCom forcing experiments. To quantify the contribution of differences in the host models to the simulated aerosol radiative forcing and absorption we conduct the AeroCom Prescribed experiment, a simple aerosol model and satellite retrieval intercomparison with prescribed highly idealised aerosol fields. Quality checks, such as diagnostic output of the 3D aerosol fields as implemented in each model, ensure the comparability of the aerosol implementation in the participating models. The simulated forcing variability among the models and retrievals is a direct measure of the contribution of host model assumptions to the uncertainty in the assessment of the aerosol radiative effects. We will present the results from the AeroCom prescribed experiment with focus on the attribution to the simulated variability to parametric and structural model uncertainties. This work will help to prioritise areas for future model improvements and ultimately lead to uncertainty reduction.

  2. Detailed Spectral Analysis of the 260 ks XMM-Newton Data of 1E 1207.4-5209 and Significance of a 2.1 keV Absorption Feature

    NASA Astrophysics Data System (ADS)

    Mori, Kaya; Chonko, James C.; Hailey, Charles J.

    2005-10-01

    We have reanalyzed the 260 ks XMM-Newton observation of 1E 1207.4-5209. There are several significant improvements over previous work. First, a much broader range of physically plausible spectral models was used. Second, we have used a more rigorous statistical analysis. The standard F-distribution was not employed, but rather the exact finite statistics F-distribution was determined by Monte Carlo simulations. This approach was motivated by the recent work of Protassov and coworkers and Freeman and coworkers. They demonstrated that the standard F-distribution is not even asymptotically correct when applied to assess the significance of additional absorption features in a spectrum. With our improved analysis we do not find a third and fourth spectral feature in 1E 1207.4-5209 but only the two broad absorption features previously reported. Two additional statistical tests, one line model dependent and the other line model independent, confirmed our modified F-test analysis. For all physically plausible continuum models in which the weak residuals are strong enough to fit, the residuals occur at the instrument Au M edge. As a sanity check we confirmed that the residuals are consistent in strength and position with the instrument Au M residuals observed in 3C 273.

  3. The librational band of water ice in AFGL 961: revisited

    NASA Astrophysics Data System (ADS)

    Smith, R. G.; Wright, C. M.

    2011-07-01

    Of all the water ice absorption bands seen in the laboratory, the librational band near 12-13 μ m has proven the most difficult to conclusively identify in observational spectra. Cox reported the detection of this band in the IRAS spectrum of the massive protostar AFGL 961 near 13.6 μ m; however, the details of the structure of the band were limited by the quality of the IRAS spectrum and the accuracy of the subtracted silicate absorption. AFGL 961 is also a double system comprising two point-like components separated by ˜6 arcsec (AFGL 961E and AFGL 961W) so the IRAS aperture included both components - it is unclear how the combination of the intrinsic spectra of these two sources may have affected the resultant IRAS spectrum. In this paper we report Spitzer and European Southern Observatory (ESO) 3.6-m mid-infrared spectroscopic observations of each component of AFGL 961. We find a broad absorption feature near 13.1 μ m common to both AFGL 961E and W. The profile and peak wavelength of this feature are well matched by the laboratory spectrum of the librational band of amorphous H2O ice in the temperature range 10-30 K, in agreement with the Cox result. Both AFGL 961E and W also have strong CO2 ice absorption near 15.2 μ m, indistinguishable in profile between the two. However, AFGL 961E shows silicates in absorption near 9.7 μ m, while AFGL 961W shows polycyclic aromatic hydrocarbons in emission and, in a small aperture, also silicates in emission. Uncertainty in where the true continuum lies in the 8-13 μ m spectral region for both AFGL 961E and W means we cannot rule out the possibility that a combination of silicate emission and absorption could be responsible for at least some of the features we see in this region. In this case, a much weaker librational band could still be present, but not as a distinct feature. In either case, the ice must be located in a cool, outer envelope surrounding both stars or a cool foreground cloud, far enough away that the ice is not appreciably modified by the local environment of either one.

  4. Opacity of iron, nickel, and copper plasmas in the x-ray wavelength range: Theoretical interpretation of 2p-3d absorption spectra

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Blenski, T.; Loisel, G.; Poirier, M.

    2011-09-15

    This paper deals with theoretical studies on the 2p-3d absorption in iron, nickel, and copper plasmas related to LULI2000 (Laboratoire pour l'Utilisation des Lasers Intenses, 2000J facility) measurements in which target temperatures were of the order of 20 eV and plasma densities were in the range 0.004-0.01 g/cm{sup 3}. The radiatively heated targets were close to local thermodynamic equilibrium (LTE). The structure of 2p-3d transitions has been studied with the help of the statistical superconfiguration opacity code sco and with the fine-structure atomic physics codes hullac and fac. A new mixed version of the sco code allowing one to treatmore » part of the configurations by detailed calculation based on the Cowan's code rcg has been also used in these comparisons. Special attention was paid to comparisons between theory and experiment concerning the term features which cannot be reproduced by sco. The differences in the spin-orbit splitting and the statistical (thermal) broadening of the 2p-3d transitions have been investigated as a function of the atomic number Z. It appears that at the conditions of the experiment the role of the term and configuration broadening was different in the three analyzed elements, this broadening being sensitive to the atomic number. Some effects of the temperature gradients and possible non-LTE effects have been studied with the help of the radiative-collisional code scric. The sensitivity of the 2p-3d structures with respect to temperature and density in medium-Z plasmas may be helpful for diagnostics of LTE plasmas especially in future experiments on the {Delta}n=0 absorption in medium-Z plasmas for astrophysical applications.« less

  5. Surface Material Analysis of the S-type Asteroids: Removing the Space Weathering Effect from Reflectance Spectrum

    NASA Technical Reports Server (NTRS)

    Ueda, Y.; Miyamoto, M.; Mikouchi, T.; Hiroi, T.

    2003-01-01

    Recent years, many researchers have been observing a lot of asteroid reflectance spectra in the UV, visible to NIR at wavelength region. Reflectance spectroscopy of asteroid at this range should bring us a lot of information about its surface materials. Pyroxene and olivine have characteristic absorption bands in this wavelength range. Low-Ca pyroxene has two absorption bands around 0.9 microns and 1.9 microns. The more Ca and Fe content, the longer both absorption band centers. On the other hand, reflectance spectrum of olivine has three complicated absorption bands around 1 m, and no absorption feature around 2 microns. In general, reflectance spectra of many asteroids that are considered to be silicate rich (i.e., S- and A type asteroids) show redder slope and more subdued absorption bands than those of terrestrial minerals and meteorites. These features are now believed to be caused by the space weathering effect, which is probably caused by micrometeorite bombardment and/or solar wind. This process causes nanophase reduced iron (npFe(sup 0)) particles near the surface of mineral grains, which leads the optical change. Therefore, the space weathering effect should be removed from asteroid reflectance spectra to compare with those of meteorite and terrestrial minerals. In this report, we will apply the expanded modified Gaussian model (MGM) to the reflectance spectra of S-type asteroids 7 Iris and 532 Herculina and compare them with those of meteorites.

  6. Ultra-violet and visible absorption characterization of explosives by differential reflectometry.

    PubMed

    Dubroca, Thierry; Moyant, Kyle; Hummel, Rolf E

    2013-03-15

    This study presents some optical properties of TNT (2,4,6-trinitrotoluene), RDX, HMX and tetryl, specifically their absorption spectra as a function of concentration in various solvents in the ultraviolet and visible portion of the electromagnetic spectrum. We utilize a standoff explosives detection method, called differential reflectometry (DR). TNT was diluted in six different solvents (acetone, acetonitrile, ethanol, ethyl acetate, methanol, and toluene), which allowed for a direct comparison of absorption features over a wide range of concentrations. A line-shape analysis was adopted with great accuracy (R(2)>0.99) to model the absorption features of TNT in differential reflectivity spectra. We observed a blue shift in the pertinent absorption band with decreasing TNT concentration for all solvents. Moreover, using this technique, it was found that for all utilized solvents the concentration of TNT as well as of RDX, HMX, and tetryl, measured as a function of the transition wavelength of the ultra-violet absorption edge in differential reflectivity spectra shows three distinct regions. A model is presented to explain this behavior which is based on intermolecular hydrogen bonding of explosives molecules with themselves (or lack thereof) at different concentrations. Other intermolecular forces such as dipole-dipole interactions, London dispersion forces and π-stacking contribute to slight variations in the resulting spectra, which were determined to be rather insignificant in comparison to hydrogen bonding. The results are aimed towards a better understanding of the DR spectra of explosives energetic materials. Copyright © 2012 Elsevier B.V. All rights reserved.

  7. M3 spectral analysis of lunar swirls and the link between optical maturation and surface hydroxyl formation at magnetic anomalies

    USGS Publications Warehouse

    Kramer, G.Y.; Besse, S.; Dhingra, D.; Nettles, J.; Klima, R.; Garrick-Bethell, I.; Clark, Roger N.; Combe, J.-P.; Head, J. W.; Taylor, L.A.; Pieters, C.M.; Boardman, J.; McCord, T.B.

    2011-01-01

    We examined the lunar swirls using data from the Moon Mineralogy Mapper (M3). The improved spectral and spatial resolution of M3 over previous spectral imaging data facilitates distinction of subtle spectral differences, and provides new information about the nature of these enigmatic features. We characterized spectral features of the swirls, interswirl regions (dark lanes), and surrounding terrain for each of three focus regions: Reiner Gamma, Gerasimovich, and Mare Ingenii. We used Principle Component Analysis to identify spectrally distinct surfaces at each focus region, and characterize the spectral features that distinguish them. We compared spectra from small, recent impact craters with the mature soils into which they penetrated to examine differences in maturation trends on- and off-swirl. Fresh, on-swirl crater spectra are higher albedo, exhibit a wider range in albedos and have well-preserved mafic absorption features compared with fresh off-swirl craters. Albedoand mafic absorptions are still evident in undisturbed, on-swirl surface soils, suggesting the maturation process is retarded. The spectral continuum is more concave compared with off-swirl spectra; a result of the limited spectral reddening being mostly constrained to wavelengths less than ∼1500 nm. Off-swirl spectra show very little reddening or change in continuum shape across the entire M3 spectral range. Off-swirl spectra are dark, have attenuated absorption features, and the narrow range in off-swirl albedos suggests off-swirl regions mature rapidly. Spectral parameter maps depicting the relative OH surface abundance for each of our three swirl focus regions were created using the depth of the hydroxyl absorption feature at 2.82 μm. For each of the studied regions, the 2.82 μm absorption feature is significantly weaker on-swirl than off-swirl, indicating the swirls are depleted in OH relative to their surroundings. The spectral characteristics of the swirls and adjacent terrains from all three focus regions support the hypothesis that the magnetic anomalies deflect solar wind ions away from the swirls and onto off-swirl surfaces. Nanophase iron (npFe0) is largely responsible for the spectral characteristics we attribute to space weathering and maturation, and is created by vaporization/deposition by micrometeorite impacts and sputtering/reduction by solar wind ions. On the swirls, the decreased proton flux slows the spectral effects of space weathering (relative to nonswirl regions) by limiting the npFe0 production mechanism almost exclusively to micrometeoroid impact vaporization/deposition. Immediately adjacent to the swirls, maturation is accelerated by the increased flux of protons deflected from the swirls.

  8. Characterization of Adrenal Lesions on Unenhanced MRI Using Texture Analysis: A Machine-Learning Approach.

    PubMed

    Romeo, Valeria; Maurea, Simone; Cuocolo, Renato; Petretta, Mario; Mainenti, Pier Paolo; Verde, Francesco; Coppola, Milena; Dell'Aversana, Serena; Brunetti, Arturo

    2018-01-17

    Adrenal adenomas (AA) are the most common benign adrenal lesions, often characterized based on intralesional fat content as either lipid-rich (LRA) or lipid-poor (LPA). The differentiation of AA, particularly LPA, from nonadenoma adrenal lesions (NAL) may be challenging. Texture analysis (TA) can extract quantitative parameters from MR images. Machine learning is a technique for recognizing patterns that can be applied to medical images by identifying the best combination of TA features to create a predictive model for the diagnosis of interest. To assess the diagnostic efficacy of TA-derived parameters extracted from MR images in characterizing LRA, LPA, and NAL using a machine-learning approach. Retrospective, observational study. Sixty MR examinations, including 20 LRA, 20 LPA, and 20 NAL. Unenhanced T 1 -weighted in-phase (IP) and out-of-phase (OP) as well as T 2 -weighted (T 2 -w) MR images acquired at 3T. Adrenal lesions were manually segmented, placing a spherical volume of interest on IP, OP, and T 2 -w images. Different selection methods were trained and tested using the J48 machine-learning classifiers. The feature selection method that obtained the highest diagnostic performance using the J48 classifier was identified; the diagnostic performance was also compared with that of a senior radiologist by means of McNemar's test. A total of 138 TA-derived features were extracted; among these, four features were selected, extracted from the IP (Short_Run_High_Gray_Level_Emphasis), OP (Mean_Intensity and Maximum_3D_Diameter), and T 2 -w (Standard_Deviation) images; the J48 classifier obtained a diagnostic accuracy of 80%. The expert radiologist obtained a diagnostic accuracy of 73%. McNemar's test did not show significant differences in terms of diagnostic performance between the J48 classifier and the expert radiologist. Machine learning conducted on MR TA-derived features is a potential tool to characterize adrenal lesions. 4 Technical Efficacy: Stage 2 J. Magn. Reson. Imaging 2018. © 2018 International Society for Magnetic Resonance in Medicine.

  9. Optical observations of nearby interstellar gas

    NASA Astrophysics Data System (ADS)

    Frisch, P. C.; York, D. G.

    1984-11-01

    Observations indicated that a cloud with a heliocentric velocity of approximately -28 km/s and a hydrogen column density that possibly could be on the order of, or greater than, 5 x 10 to the 19 power/square cm is located within the nearest 50 to 80 parsecs in the direction of Ophiuchus. This is a surprisingly large column density of material for this distance range. The patchy nature of the absorption from the cloud indicates that it may not be a feature with uniform properties, but rather one with small scale structure which includes local enhancements in the column density. This cloud is probably associated with the interstellar cloud at about the same velocity in front of the 20 parsec distant star alpha Oph (Frisch 1981, Crutcher 1982), and the weak interstellar polarization found in stars as near as 35 parsecs in this general region (Tinbergen 1982). These data also indicate that some portion of the -14 km/s cloud also must lie within the 100 parsec region. Similar observations of both Na1 and Ca2 interstellar absorption features were performed in other lines of sight. Similar interstellar absorption features were found in a dozen stars between 20 and 100 parsecs of the Sun.

  10. Optical Observations of Nearby Interstellar Gas

    NASA Technical Reports Server (NTRS)

    Frisch, P. C.; York, D. G.

    1984-01-01

    Observations indicated that a cloud with a heliocentric velocity of approximately -28 km/s and a hydrogen column density that possibly could be on the order of, or greater than, 5 x 10 to the 19 power/square cm is located within the nearest 50 to 80 parsecs in the direction of Ophiuchus. This is a surprisingly large column density of material for this distance range. The patchy nature of the absorption from the cloud indicates that it may not be a feature with uniform properties, but rather one with small scale structure which includes local enhancements in the column density. This cloud is probably associated with the interstellar cloud at about the same velocity in front of the 20 parsec distant star alpha Oph (Frisch 1981, Crutcher 1982), and the weak interstellar polarization found in stars as near as 35 parsecs in this general region (Tinbergen 1982). These data also indicate that some portion of the -14 km/s cloud also must lie within the 100 parsec region. Similar observations of both Na1 and Ca2 interstellar absorption features were performed in other lines of sight. Similar interstellar absorption features were found in a dozen stars between 20 and 100 parsecs of the Sun.

  11. A Time-dependant atmospheric model of HD209458b

    NASA Astrophysics Data System (ADS)

    Iro, N.; Bézard, B.; Guillot, T.

    2004-11-01

    Charbonneau et al. (2002) conducted HST spectroscopic observations of HD209458 centered on the sodium doublet at 589.3 nm. An absorption feature was found, interpreted as an absorption from the sodium in the planet's atmosphere. However, this feature is weaker than predicted by static radiative equilibrium atmospheric models of HD209458b. We present a time-dependent radiative model of the atmosphere of HD209458b and investigate its thermal structure and chemical composition. Time-dependent temperature profiles are calculated, assuming a constant-with-height zonal wind, modelled as a solid body rotation. We predict day-night variations of the effective temperature of ˜600 K, for an equatorial rotation rate of 1 km s-1, in good agreement with the predictions by Showman & Guillot, 2002. At high altitudes (mbar pressures or less), the night temperatures are low enough to allow sodium to condense into Na2S. Synthetic transit spectra of the visible Na doublet show a much weaker sodium absorption on the morning limb than on the evening limb. The calculated dimming of the sodium feature during a planetary transit agrees with the value reported by Charbonneau et al. (2002).

  12. Two-phase ultraviolet spectrophotometry of the pulsating white dwarf ZZ Piscium

    NASA Technical Reports Server (NTRS)

    Bond, H. E.; Kemper, E.; Grauer, A. D.; Holm, A. V.; Panek, R. J.; Schiffer, F. H., III

    1985-01-01

    Spectra of the pulsating white dwarf ZZ Psc (= G29-38) were obtained using the International Ultraviolet Explorer. By using a multiple-exposure technique in conjunction with simultaneous ground-based exposure-metering photometry, it was possible to obtain mean on-pulse and off-pulse spectra in the 1950-1310 A wavelength range. The ratio of the time-averaged on-pulse to off-pulse spectra is best fitted by a temperature variation that is in phase with the optical light variation. This result is consistent with the hypothesis that the observed variation is due to a high-order nonradial pulsation. Conventional ultraviolet spectra of ZZ Psc showed broad absorption features at 1390 and 1600 A. These features are also found in the spectra of the cool DA-type white dwarfs G226-29 and G67-23, and appear to increase in strength with decreasing temperature. A possible explanation for the 1600 A feature is absorption by the satellite band of resonance-broadened hydrogen Ly-alpha. Such absorption would also help explain a discrepancy between the observed pulsation amplitude shortward of 1650 A and the predicted amplitudes based on model atmospheres.

  13. Detection of Organic Matter in Sediments with Near-Infrared Reflectance Spectroscopy: Effects of Mineralogy, Albedo and Hydration

    NASA Astrophysics Data System (ADS)

    Kaplan, H. H.; Milliken, R.

    2014-12-01

    Laboratory, field-, and satellite-based visible-near infrared reflectance spectroscopy allows for rapid, remote, and non-destructive analysis of geologic materials to identify mineralogy as well as organic compounds. This type of analysis has potential to aid the search for organics on Mars as a means of first detection of reduced carbon, or to study organic matter nondestructively in valuable samples such as meteorites. In order to assess potential applications of this method we aim to answer fundamental questions about detection limits and quantification of organic matter using reflectance spectroscopy. Laboratory mixtures and natural samples are measured for total organic carbon (TOC in wt.%) with standard methods and reflectance spectroscopy. Absorption features due to C-H2 and C-H3 bonds are observed in the 3.3 to 3.5μm (3000 to 2850 cm-1) wavelength region. A strong H2O feature near 3μm, as well as carbonate-related absorptions near 3.4µm, are also found in this spectral region and can complicate detection of organic material, particularly at low TOC values. In natural samples without carbonate there appears to be a linear trend between TOC and the band depth of organic absorptions; samples that have low albedo, or strong 3μm water features deviate from this trend line. Spectra of samples with carbonate may be modeled with Gaussians to remove the influence of the carbonate features and better match the organic absorption trend. Early results indicate that quantification of organic matter in natural fine-grained samples using reflectance spectroscopy will need to take low-albedo components and water content into account. Detection limits may also depend on these properties; organic absorption features are clearly seen in the lowest TOC sample measured so far (0.08wt% or 800ppm), which is a relatively bright, carbonate-free, quartz- and clay-dominated outcrop sample. A series of laboratory experiments have been undertaken in which known amounts of organic compounds are mixed with smectitic clay in order to understand detection limits and the effects of albedo and hydration in a controlled setting. These laboratory results are compared with findings from natural samples that represent a wide range of ages and depositional settings.

  14. Effect of in-material losses on terahertz absorption, transmission, and reflection in photonic crystals made of polar dielectrics

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Serebryannikov, Andriy E., E-mail: andser@amu.edu.pl; Nanotechnology Research Center—NANOTAM, Bilkent University, 06800 Ankara; Nojima, S.

    2015-10-07

    The effect of the material absorption factor on terahertz absorption (A), transmittance (T), and reflectance (R) for slabs of PhC that comprise rods made of GaAs, a polar dielectric, is studied. The main goal was to illustrate how critical a choice of the absorption factor for simulations is and to indicate the importance of the possible modification of the absorption ability by using either active or lossy impurities. The spectra of A, T, and R are strongly sensitive to the location of the polaritonic gap with respect to the photonic pass and stop bands connected with periodicity that enables themore » efficient combination of the effects of material and structural parameters. It will be shown that the spectra can strongly depend on the utilized value of the material absorption factor. In particular, both narrow and wide absorption bands may appear owing to a variation of the material parameters with a frequency in the vicinity of the polaritonic gap. The latter are often achieved at wideband suppression of transmission, so that an ultra-wide stop band can appear as a result of adjustment of the stop bands having different origin. The results obtained at simultaneous variation of the absorption factor and frequency, and angle of incidence and frequency, indicate the possibility of the existence of wide ranges of tolerance, in which the basic features do remain. This allows for mitigating the accuracy requirements for the absorption factor in simulations and promises the efficient absorption of nonmonochromatic waves and beams with a wide angular spectrum. Suppression of narrowband effects in transmission is demonstrated at rather large values of the absorption factor, when they appear due to either the defect modes related to structural defects or dispersion inspired variations of the material parameters in the vicinity of the polaritonic gap. Comparison with auxiliary structures helps one to detect the common features and differences of homogeneous slabs and slabs of a PhC, which are made of GaAs.« less

  15. Diagnostics of reactive oxygen species produced by microplasmas

    NASA Astrophysics Data System (ADS)

    Sousa, J. S.; Puech, V.

    2013-11-01

    Atmospheric pressure generation of reactive oxygen species (ROS) by microplasmas was experimentally studied. The remarkable stability of the microcathode sustained discharge (MCSD) allowed the operation of dc glow discharges, free from the glow-to-arc transition, in He/O2/NO mixtures at atmospheric pressure. Absolute densities of the main ROS were measured by different optical diagnostics: singlet delta oxygen (O2(a 1Δg)) by infrared emission and vacuum ultraviolet absorption in the effluent, ozone (O3) by ultraviolet absorption in the effluent, and atomic oxygen inside the discharge by two-photon absorption laser induced fluorescence. The effect of different parameters, such as gas flow and mixture, and discharge current, on the production of these ROS was studied. High ROS densities up to 1016 cm-3 were achieved. It is shown that the density ratio of O2(a 1Δg) to O3 can be finely tuned in the range [10-3-10+4], through the values of discharge current and NO concentration, and that high O2(a 1Δg) and O3 densities can be transported over distances longer than 50 cm. The MCSD is, thus, a very suitable tool for the continuous production at atmospheric pressure of large fluxes of O2(a 1Δg) and O3, useful to a wide range of applications, notably in plasma medicine.

  16. Clinical and diagnostic features of East Coast fever (Theileria parva) infection of cattle.

    PubMed

    Irvin, A D; Mwamachi, D M

    1983-08-27

    East Coast fever is a tick-borne protozoal disease affecting cattle in a large part of East and Central Africa. Since the vector occurs over an even wider range there is considerable potential for the disease to spread to countries which are currently disease free. This article, describing the clinical and diagnostic features of East Coast fever, may remind authorities in these countries of the potential hazards posed by the disease.

  17. Establishment of the mathematical model for diagnosing the engine valve faults by genetic programming

    NASA Astrophysics Data System (ADS)

    Yang, Wen-Xian

    2006-05-01

    Available machine fault diagnostic methods show unsatisfactory performances on both on-line and intelligent analyses because their operations involve intensive calculations and are labour intensive. Aiming at improving this situation, this paper describes the development of an intelligent approach by using the Genetic Programming (abbreviated as GP) method. Attributed to the simple calculation of the mathematical model being constructed, different kinds of machine faults may be diagnosed correctly and quickly. Moreover, human input is significantly reduced in the process of fault diagnosis. The effectiveness of the proposed strategy is validated by an illustrative example, in which three kinds of valve states inherent in a six-cylinders/four-stroke cycle diesel engine, i.e. normal condition, valve-tappet clearance and gas leakage faults, are identified. In the example, 22 mathematical functions have been specially designed and 8 easily obtained signal features are used to construct the diagnostic model. Different from existing GPs, the diagnostic tree used in the algorithm is constructed in an intelligent way by applying a power-weight coefficient to each feature. The power-weight coefficients vary adaptively between 0 and 1 during the evolutionary process. Moreover, different evolutionary strategies are employed, respectively for selecting the diagnostic features and functions, so that the mathematical functions are sufficiently utilized and in the meantime, the repeated use of signal features may be fully avoided. The experimental results are illustrated diagrammatically in the following sections.

  18. Fused man-machine classification schemes to enhance diagnosis of breast microcalcifications

    NASA Astrophysics Data System (ADS)

    Andreadis, Ioannis; Sevastianos, Chatzistergos; George, Spyrou; Konstantina, Nikita

    2017-11-01

    Computer aided diagnosis (CAD x ) approaches are developed towards the effective discrimination between benign and malignant clusters of microcalcifications. Different sources of information are exploited, such as features extracted from the image analysis of the region of interest, features related to the location of the cluster inside the breast, age of the patient and descriptors provided by the radiologists while performing their diagnostic task. A series of different CAD x schemes are implemented, each of which uses a different category of features and adopts a variety of machine learning algorithms and alternative image processing techniques. A novel framework is introduced where these independent diagnostic components are properly combined according to features critical to a radiologist in an attempt to identify the most appropriate CAD x schemes for the case under consideration. An open access database (Digital Database of Screening Mammography (DDSM)) has been elaborated to construct a large dataset with cases of varying subtlety, in order to ensure the development of schemes with high generalization ability, as well as extensive evaluation of their performance. The obtained results indicate that the proposed framework succeeds in improving the diagnostic procedure, as the achieved overall classification performance outperforms all the independent single diagnostic components, as well as the radiologists that assessed the same cases, in terms of accuracy, sensitivity, specificity and area under the curve following receiver operating characteristic analysis.

  19. A non-invasive diffuse reflectance calibration-free method for absolute determination of exogenous biochemicals concentration in biological tissues

    NASA Astrophysics Data System (ADS)

    Lappa, Alexander V.; Kulikovskiy, Artem N.; Busarov, Oleg G.

    2014-03-01

    The paper presents a new method for distant non-destructive determination of concentration of light absorbing admixtures in turbid media. In particular, it is intended for non-invasive in vivo control of accumulation in patient tissues of various biochemicals introduced to the patients for chemotherapy, photodynamic therapy or diagnostics. It is require that the admixture absorption spectrum should have a clearly marked peak in the wavelength region where the pure medium one varies regularly. Fluorescence of admixtures is not required. The method uses the local diffuse reflectance spectroscopy with optical fiber probe including one emitting and two reading There are several features in the method: the value to be determined is absolute concentration of admixtures; the method needs no calibration measurements on phantoms; it needs no reference measurements on sample with zero admixture concentration; it uses a two parametric kinetic light propagation model and original algorithms to resolve direct and inverse tasks of radiation transport theory. Experimental testing passed with tissue equivalent phantoms and different admixtures, including a chlorine photosensitizer, showed accuracy under 10% in all cases.

  20. A novel optical-fiber based surface plasmon resonance sensing architecture and its application to gastric cancer diagnostics

    NASA Astrophysics Data System (ADS)

    Francois, Alexandre; Boehm, Jonathan; Penno, Megan; Hoffmann, Peter; Monro, Tanya M.

    2011-05-01

    The management of threats such as pandemics and explosives, and of health and the environment requires the rapid deployment of highly sensitive detection tools. Sensors based on Surface Plasmon Resonance (SPR) allow rapid, labelfree, highly sensitive detection, and indeed this phenomenon underpins the only label-free optical biosensing technology that is available commercially. In these sensors, the existence of surface plasmons is inferred indirectly from absorption features that correspond to the coupling of light to the surface plasmon. Although SPR is not intrinsically a radiative process, under certain conditions the surface plasmon can itself couple to the local photon states, and emit light. Here we show for the first time that by collecting and characterising this re-emitted light, it is possible to realise new SPR sensing architectures that are more compact, versatile and robust than existing approaches. It is applicable to a range of SPR geometries, including optical fibres. As an example, this approach has been used to demonstrate the detection of a protein identified as a being a biomarker for cancer.

  1. Clinical approach to Parkinson's disease: features, diagnosis, and principles of management.

    PubMed

    Massano, João; Bhatia, Kailash P

    2012-06-01

    Parkinson's disease (PD) is one of the most common neurodegenerative disorders. The condition causes a heavy burden both on those affected, as well as their families. Accurate diagnosis is critical and remains founded on clinical grounds as no specific diagnostic test is available so far. The clinical picture of PD is typical in many instances; however, features distinguishing it from other disorders should be thoroughly sought. Monogenic forms of PD also have some distinctive characteristics in many cases. This text is a roadmap to accurate diagnosis in PD, as it approaches clinical features, diagnostic methodology, and leading differential diagnoses. Therapeutic issues are also briefly discussed.

  2. Analysis of aircraft spectrometer data with logarithmic residuals

    NASA Technical Reports Server (NTRS)

    Green, A. A.; Craig, M. D.

    1985-01-01

    Spectra from airborne systems must be analyzed in terms of their mineral-related absorption features. Methods for removing backgrounds and extracting these features one at a time from reflectance spectra are discussed. Methods for converting radiance spectra into a form similar to reflectance spectra so that the feature extraction procedures can be implemented on aircraft spectrometer data are also discussed.

  3. The Composition of the Iapetus Dark Material, Hyperion and Phoebe

    NASA Astrophysics Data System (ADS)

    Stockstill, K. R.; Larson, S. M.; Vilas, F.; Gaffey, M. J.

    1996-09-01

    A linear mixing model has been used to separate the high-resolution visible/near-infrared reflectance spectrum of the Iapetus dark material from spectra of the leading and trailing sides of Iapetus. A distinct absorption feature centered at 0.67 mu m is apparent in the spectrum. A slight inflection covering 0.4 to 0.6 mu m and a change in slope near 0.73 mu m suggesting the lower wavelength edge of an absorption are also present. These absorption features are attributed to (6) A1 -> (4) T2(G) and (6) A1 -> (4) T1(G) charge transfer transitions in minerals such as goethite and hematite that are products of the aqueous alteration of anhydrous silicates. We confirm the strong, positive spectral slope attributed to organic material. Broadband photometry of Phoebe using ECAS filters was acquired on four nights in 1982 (Tholen and Zellner, Icarus, 1983). On two nights covering the same side of Phoebe, the photometry tested positively for an absorption feature centered at 0.7 mu m due to oxidized iron in phyllosilicates. The opposite side of Phoebe was covered by the other two observations. The spectral difference between two opposite sides of Phoebe suggests that an impact fragmented Phoebe's parent body, producing Phoebe at the junction of two different compositional units. High resolution reflectance spectra have been obtained of the Saturnian satellites Phoebe and Hyperion, the main candidates for a circumsaturnian origin of the Iapetus dark material. These will be discussed.

  4. PROBING FOR EVIDENCE OF PLUMES ON EUROPA WITH HST /STIS

    DOE Office of Scientific and Technical Information (OSTI.GOV)

    Sparks, W. B.; Bergeron, E.; Cracraft, M.

    2016-10-01

    Roth et al. (2014a) reported evidence for plumes of water venting from a southern high latitude region on Europa: spectroscopic detection of off-limb line emission from the dissociation products of water. Here, we present Hubble Space Telescope direct images of Europa in the far-ultraviolet (FUV) as it transited the smooth face of Jupiter to measure absorption from gas or aerosols beyond the Europa limb. Out of 10 observations, we found 3 in which plume activity could be implicated. Two observations showed statistically significant features at latitudes similar to Roth et al., and the third at a more equatorial location. Wemore » consider potential systematic effects that might influence the statistical analysis and create artifacts, and are unable to find any that can definitively explain the features, although there are reasons to be cautious. If the apparent absorption features are real, the magnitude of implied outgassing is similar to that of the Roth et al. feature; however, the apparent activity appears more frequently in our data.« less

  5. Object Recognition in Mental Representations: Directions for Exploring Diagnostic Features through Visual Mental Imagery.

    PubMed

    Roldan, Stephanie M

    2017-01-01

    One of the fundamental goals of object recognition research is to understand how a cognitive representation produced from the output of filtered and transformed sensory information facilitates efficient viewer behavior. Given that mental imagery strongly resembles perceptual processes in both cortical regions and subjective visual qualities, it is reasonable to question whether mental imagery facilitates cognition in a manner similar to that of perceptual viewing: via the detection and recognition of distinguishing features. Categorizing the feature content of mental imagery holds potential as a reverse pathway by which to identify the components of a visual stimulus which are most critical for the creation and retrieval of a visual representation. This review will examine the likelihood that the information represented in visual mental imagery reflects distinctive object features thought to facilitate efficient object categorization and recognition during perceptual viewing. If it is the case that these representational features resemble their sensory counterparts in both spatial and semantic qualities, they may well be accessible through mental imagery as evaluated through current investigative techniques. In this review, methods applied to mental imagery research and their findings are reviewed and evaluated for their efficiency in accessing internal representations, and implications for identifying diagnostic features are discussed. An argument is made for the benefits of combining mental imagery assessment methods with diagnostic feature research to advance the understanding of visual perceptive processes, with suggestions for avenues of future investigation.

  6. Object Recognition in Mental Representations: Directions for Exploring Diagnostic Features through Visual Mental Imagery

    PubMed Central

    Roldan, Stephanie M.

    2017-01-01

    One of the fundamental goals of object recognition research is to understand how a cognitive representation produced from the output of filtered and transformed sensory information facilitates efficient viewer behavior. Given that mental imagery strongly resembles perceptual processes in both cortical regions and subjective visual qualities, it is reasonable to question whether mental imagery facilitates cognition in a manner similar to that of perceptual viewing: via the detection and recognition of distinguishing features. Categorizing the feature content of mental imagery holds potential as a reverse pathway by which to identify the components of a visual stimulus which are most critical for the creation and retrieval of a visual representation. This review will examine the likelihood that the information represented in visual mental imagery reflects distinctive object features thought to facilitate efficient object categorization and recognition during perceptual viewing. If it is the case that these representational features resemble their sensory counterparts in both spatial and semantic qualities, they may well be accessible through mental imagery as evaluated through current investigative techniques. In this review, methods applied to mental imagery research and their findings are reviewed and evaluated for their efficiency in accessing internal representations, and implications for identifying diagnostic features are discussed. An argument is made for the benefits of combining mental imagery assessment methods with diagnostic feature research to advance the understanding of visual perceptive processes, with suggestions for avenues of future investigation. PMID:28588538

  7. Comparison of machine learning methods for classifying mediastinal lymph node metastasis of non-small cell lung cancer from 18F-FDG PET/CT images.

    PubMed

    Wang, Hongkai; Zhou, Zongwei; Li, Yingci; Chen, Zhonghua; Lu, Peiou; Wang, Wenzhi; Liu, Wanyu; Yu, Lijuan

    2017-12-01

    This study aimed to compare one state-of-the-art deep learning method and four classical machine learning methods for classifying mediastinal lymph node metastasis of non-small cell lung cancer (NSCLC) from 18 F-FDG PET/CT images. Another objective was to compare the discriminative power of the recently popular PET/CT texture features with the widely used diagnostic features such as tumor size, CT value, SUV, image contrast, and intensity standard deviation. The four classical machine learning methods included random forests, support vector machines, adaptive boosting, and artificial neural network. The deep learning method was the convolutional neural networks (CNN). The five methods were evaluated using 1397 lymph nodes collected from PET/CT images of 168 patients, with corresponding pathology analysis results as gold standard. The comparison was conducted using 10 times 10-fold cross-validation based on the criterion of sensitivity, specificity, accuracy (ACC), and area under the ROC curve (AUC). For each classical method, different input features were compared to select the optimal feature set. Based on the optimal feature set, the classical methods were compared with CNN, as well as with human doctors from our institute. For the classical methods, the diagnostic features resulted in 81~85% ACC and 0.87~0.92 AUC, which were significantly higher than the results of texture features. CNN's sensitivity, specificity, ACC, and AUC were 84, 88, 86, and 0.91, respectively. There was no significant difference between the results of CNN and the best classical method. The sensitivity, specificity, and ACC of human doctors were 73, 90, and 82, respectively. All the five machine learning methods had higher sensitivities but lower specificities than human doctors. The present study shows that the performance of CNN is not significantly different from the best classical methods and human doctors for classifying mediastinal lymph node metastasis of NSCLC from PET/CT images. Because CNN does not need tumor segmentation or feature calculation, it is more convenient and more objective than the classical methods. However, CNN does not make use of the import diagnostic features, which have been proved more discriminative than the texture features for classifying small-sized lymph nodes. Therefore, incorporating the diagnostic features into CNN is a promising direction for future research.

  8. Diagnostic accuracy of ultrasonic histogram features to evaluate radiation toxicity of the parotid glands: a clinical study of xerostomia following head-and-neck cancer radiotherapy.

    PubMed

    Yang, Xiaofeng; Tridandapani, Srini; Beitler, Jonathan J; Yu, David S; Chen, Zhengjia; Kim, Sungjin; Bruner, Deborah W; Curran, Walter J; Liu, Tian

    2014-10-01

    To investigate the diagnostic accuracy of ultrasound histogram features in the quantitative assessment of radiation-induced parotid gland injury and to identify potential imaging biomarkers for radiation-induced xerostomia (dry mouth)-the most common and debilitating side effect after head-and-neck radiotherapy (RT). Thirty-four patients, who have developed xerostomia after RT for head-and-neck cancer, were enrolled. Radiation-induced xerostomia was defined by the Radiation Therapy Oncology Group/European Organization for Research and Treatment of Cancer morbidity scale. Ultrasound scans were performed on each patient's parotids bilaterally. The 34 patients were stratified into the acute-toxicity groups (16 patients, ≤ 3 months after treatment) and the late-toxicity group (18 patients, > 3 months after treatment). A separate control group of 13 healthy volunteers underwent similar ultrasound scans of their parotid glands. Six sonographic features were derived from the echo-intensity histograms to assess acute and late toxicity of the parotid glands. The quantitative assessments were compared to a radiologist's clinical evaluations. The diagnostic accuracy of these ultrasonic histogram features was evaluated with the receiver operating characteristic (ROC) curve. With an area under the ROC curve greater than 0.90, several histogram features demonstrated excellent diagnostic accuracy for evaluation of acute and late toxicity of parotid glands. Significant differences (P < .05) in all six sonographic features were demonstrated between the control, acute-toxicity, and late-toxicity groups. However, subjective radiologic evaluation cannot distinguish between acute and late toxicity of parotid glands. We demonstrated that ultrasound histogram features could be used to measure acute and late toxicity of the parotid glands after head-and-neck cancer RT, which may be developed into a low-cost imaging method for xerostomia monitoring and assessment. Copyright © 2014 AUR. Published by Elsevier Inc. All rights reserved.

  9. Population differences in dysmorphic features among children with fetal alcohol spectrum disorders.

    PubMed

    May, Philip A; Gossage, J Phillip; Smith, Matthew; Tabachnick, Barbara G; Robinson, Luther K; Manning, Melanie; Cecanti, Mauro; Jones, Kenneth Lyons; Khaole, Nathaniel; Buckley, David; Kalberg, Wendy O; Trujillo, Phyllis M; Hoyme, H Eugene

    2010-05-01

    To examine the variation in significant dysmorphic features in children from 3 different populations with the most dysmorphic forms of fetal alcohol spectrum disorders, fetal alcohol syndrome (FAS), and partial fetal alcohol syndrome (PFAS). Advanced multiple regression techniques are used to determine the discriminating physical features in the diagnosis of FAS and PFAS among children from Northern Plains Indian communities, South Africa, and Italy. Within the range of physical features used to identify children with fetal alcohol spectrum disorders, specifically FAS and PFAS, there is some significant variation in salient diagnostic features from one population to the next. Intraclass correlations in diagnostic features between these 3 populations is 0.20, indicating that about 20% of the variability in dysmorphology core features is associated with location and, therefore, specific racial/ethnic population. The highly significant diagnostic indicators present in each population are identified for the full samples of FAS, PFAS, and normals and also among children with FAS only. A multilevel model for these populations combined indicates that these variables predict dysmorphology unambiguously: small palpebral fissures, narrow vermillion, smooth philtrum, flat nasal bridge, and fifth finger clinodactyly. Long philtrum varies substantially as a predictor in the 3 populations. Predictors not significantly related to fetal alcohol spectrum disorders dysmorphology across the 3 populations are centile of height (except in Italy) strabismus, interpupilary distance, intercanthal distance, and heart murmurs. The dysmorphology associated with FAS and PFAS vary across populations, yet a particular array of common features occurs in each population, which permits a consistent diagnosis across populations.

  10. Spectral reflectance properties of minerals exposed to simulated Mars surface conditions

    NASA Astrophysics Data System (ADS)

    Cloutis, E. A.; Craig, M. A.; Kruzelecky, R. V.; Jamroz, W. R.; Scott, A.; Hawthorne, F. C.; Mertzman, S. A.

    2008-05-01

    A number of mineral species were exposed to martian surface conditions of atmospheric pressure and composition, temperature, and UV light regime, and their evolution was monitored using reflectance spectroscopy. The stabilities for different groups varied widely. Phyllosilicate spectra all showed measurable losses of interlayer H 2O, with some structural groups showing more rapid H 2O loss than others. Loss of OH from the phyllosilicates is not always accompanied by a change in metal-OH overtone absorption bands. OH-bearing sulfates, such as jarosite and alunite, show no measurable change in spectral properties, suggesting that they should be spectrally detectable on Mars on the basis of diagnostic absorption bands in the 0.4-2.5 μm region. Fe 3+- and H 2O-bearing sulfates all showed changes in the appearance and/or reduction in depths of hydroxo-bridged Fe 3+ absorption bands, particularly at 0.43 μm. The spectral changes were often accompanied by visible color changes, suggesting that subsurface sulfates exposed to the martian surface environment may undergo measurable changes in reflectance spectra and color over short periods of time (days to weeks). Organic-bearing geological materials showed no measurable change in C sbnd H related absorption bands, while carbonates and hydroxides also showed no systematic changes in spectral properties. The addition of ultraviolet irradiation did not seem to affect mineral stability or rate of spectral change, with one exception (hexahydrite). In some cases, spectral changes could be related to the formation of specific new phases. The data also suggest that hydrated minerals detected on Mars to date retain their diagnostic spectral properties that allow their unique identification.

  11. Diagnosis and Challenges of Polycystic Ovary Syndrome in Adolescence

    PubMed Central

    Agapova, Sophia E.; Cameo, Tamara; Sopher, Aviva B.; Oberfield, Sharon E.

    2015-01-01

    Although the diagnostic criteria for polycystic ovary syndrome (PCOS) have become less stringent over the years, determination of the minimum diagnostic features in adolescents is still an area of controversy. Of particular concern is that many of the features considered to be diagnostic for PCOS may evolve over time and change during the first few years after menarche. Nonetheless, attempts to define young women who may be at risk for development of PCOS is pertinent since associated morbidity such as obesity, insulin resistance, and dyslipidemia may benefit from early intervention. The relative utility of diagnostic tools such as persistence of anovulatory cycles, hyperandrogenemia, hyperandrogenism (hirsutism, acne, or alopecia), or ovarian findings on ultrasound is not established in adolescents. Some suggest that even using the strictest criteria, the diagnosis of PCOS may not valid in adolescents younger than 18 years. In addition, evidence does not necessarily support that lack of treatment of PCOS in younger adolescents will result in untoward outcomes since features consistent with PCOS often resolve with time. The presented data will help determine if it is possible to establish firm criteria which may be used to reliably diagnose PCOS in adolescents. PMID:24715514

  12. Exciton absorption of entangled photons in semiconductor quantum wells

    NASA Astrophysics Data System (ADS)

    Rodriguez, Ferney; Guzman, David; Salazar, Luis; Quiroga, Luis; Condensed Matter Physics Group Team

    2013-03-01

    The dependence of the excitonic two-photon absorption on the quantum correlations (entanglement) of exciting biphotons by a semiconductor quantum well is studied. We show that entangled photon absorption can display very unusual features depending on space-time-polarization biphoton parameters and absorber density of states for both bound exciton states as well as for unbound electron-hole pairs. We report on the connection between biphoton entanglement, as quantified by the Schmidt number, and absorption by a semiconductor quantum well. Comparison between frequency-anti-correlated, unentangled and frequency-correlated biphoton absorption is addressed. We found that exciton oscillator strengths are highly increased when photons arrive almost simultaneously in an entangled state. Two-photon-absorption becomes a highly sensitive probe of photon quantum correlations when narrow semiconductor quantum wells are used as two-photon absorbers. Research funds from Facultad de Ciencias, Universidad de los Andes

  13. Structural parameter effect of porous material on sound absorption performance of double-resonance material

    NASA Astrophysics Data System (ADS)

    Fan, C.; Tian, Y.; Wang, Z. Q.; Nie, J. K.; Wang, G. K.; Liu, X. S.

    2017-06-01

    In view of the noise feature and service environment of urban power substations, this paper explores the idea of compound impedance, fills some porous sound-absorption material in the first resonance cavity of the double-resonance sound-absorption material, and designs a new-type of composite acoustic board. We conduct some acoustic characterizations according to the standard test of impedance tube, and research on the influence of assembly order, the thickness and area density of the filling material, and back cavity on material sound-absorption performance. The results show that the new-type of acoustic board consisting of aluminum fibrous material as inner structure, micro-porous board as outer structure, and polyester-filled space between them, has good sound-absorption performance for low frequency and full frequency noise. When the thickness, area density of filling material and thickness of back cavity increase, the sound absorption coefficient curve peak will move toward low frequency.

  14. Pericardiectomy as a diagnostic and therapeutic procedure.

    PubMed

    Konik, Ewa; Geske, Jeffrey; Edwards, William; Gersh, Bernard

    2016-11-14

    A 70-year-old man presented with recent onset, predominantly right-sided heart failure. Echocardiogram demonstrated features of hypertensive heart disease and was suggestive of, but non-diagnostic for, constrictive pericarditis (CP). CT demonstrated mild pericardial thickening. Right heart catheterisation showed elevation and equalisation of diastolic pressures in all cardiac chambers with early rapid filling, minimal ventricular interdependence, and no dissociation of intrathoracic and intracardiac pressures. While several features pointed towards CP, the minimal ventricular interdependence and no dissociation of intrathoracic and intracardiac pressures suggested other pathology. Diagnostic pericardiectomy was performed, after which the central venous pressure decreased from 22 to 12 mm Hg. Pathology revealed pericardial fibrosis. The patient experienced sustained resolution of his heart failure. A potential explanation for lack of CP criteria was the presence of hypertensive heart disease. CP needs to be considered when approaching patients with heart failure as diagnostic evaluation can be multifaceted and treatment curative. 2016 BMJ Publishing Group Ltd.

  15. Application of Multilabel Learning Using the Relevant Feature for Each Label in Chronic Gastritis Syndrome Diagnosis

    PubMed Central

    Liu, Guo-Ping; Yan, Jian-Jun; Wang, Yi-Qin; Fu, Jing-Jing; Xu, Zhao-Xia; Guo, Rui; Qian, Peng

    2012-01-01

    Background. In Traditional Chinese Medicine (TCM), most of the algorithms are used to solve problems of syndrome diagnosis that only focus on one syndrome, that is, single label learning. However, in clinical practice, patients may simultaneously have more than one syndrome, which has its own symptoms (signs). Methods. We employed a multilabel learning using the relevant feature for each label (REAL) algorithm to construct a syndrome diagnostic model for chronic gastritis (CG) in TCM. REAL combines feature selection methods to select the significant symptoms (signs) of CG. The method was tested on 919 patients using the standard scale. Results. The highest prediction accuracy was achieved when 20 features were selected. The features selected with the information gain were more consistent with the TCM theory. The lowest average accuracy was 54% using multi-label neural networks (BP-MLL), whereas the highest was 82% using REAL for constructing the diagnostic model. For coverage, hamming loss, and ranking loss, the values obtained using the REAL algorithm were the lowest at 0.160, 0.142, and 0.177, respectively. Conclusion. REAL extracts the relevant symptoms (signs) for each syndrome and improves its recognition accuracy. Moreover, the studies will provide a reference for constructing syndrome diagnostic models and guide clinical practice. PMID:22719781

  16. A flexible data-driven comorbidity feature extraction framework.

    PubMed

    Sideris, Costas; Pourhomayoun, Mohammad; Kalantarian, Haik; Sarrafzadeh, Majid

    2016-06-01

    Disease and symptom diagnostic codes are a valuable resource for classifying and predicting patient outcomes. In this paper, we propose a novel methodology for utilizing disease diagnostic information in a predictive machine learning framework. Our methodology relies on a novel, clustering-based feature extraction framework using disease diagnostic information. To reduce the data dimensionality, we identify disease clusters using co-occurrence statistics. We optimize the number of generated clusters in the training set and then utilize these clusters as features to predict patient severity of condition and patient readmission risk. We build our clustering and feature extraction algorithm using the 2012 National Inpatient Sample (NIS), Healthcare Cost and Utilization Project (HCUP) which contains 7 million hospital discharge records and ICD-9-CM codes. The proposed framework is tested on Ronald Reagan UCLA Medical Center Electronic Health Records (EHR) from 3041 Congestive Heart Failure (CHF) patients and the UCI 130-US diabetes dataset that includes admissions from 69,980 diabetic patients. We compare our cluster-based feature set with the commonly used comorbidity frameworks including Charlson's index, Elixhauser's comorbidities and their variations. The proposed approach was shown to have significant gains between 10.7-22.1% in predictive accuracy for CHF severity of condition prediction and 4.65-5.75% in diabetes readmission prediction. Copyright © 2016 Elsevier Ltd. All rights reserved.

  17. Nanodiamonds + bacteriochlorin as an infrared photosensitizer for deep-lying tumor diagnostics and therapy

    NASA Astrophysics Data System (ADS)

    Sharova, A. S.; Maklygina, YU S.; Lisichkin, G. V.; Mingalev, P. G.; Loschenov, V. B.

    2016-08-01

    The spectroscopic properties of potentially perspective nanostructure: diamond nanoparticles with a surface layer of IR-photosensitizer, bacteriochlorin, were experimentally investigated in this study. Such specific structure of the object encourages enhancement of the drug tropism to the tumor, as well as increasing of photodynamic penetration depth. The size distribution spectra of diamond nanoparticles; diamond nanoparticles, artificially covered with bacteriochlorin molecules layer, in aqueous solution, were obtained during the study. Based on the absorption and fluorescence spectra analysis, the benefits of functional nanostructure as a drug for deep-lying tumor diagnostics and therapy were reviewed.

  18. Indications of the Mineralogy of Callisto and Mars from Reflectance Spectroscopy.

    NASA Astrophysics Data System (ADS)

    Calvin, Wendy Marie

    1991-02-01

    Remotely sensed reflectance spectra contain information on mineral identities, grain sizes, and abundances. This thesis consists of analysis of such spectra for two planetary objects, Callisto and Mars. Theoretical modeling of telescopic spectra of Callisto indicates that the surface consists of 20 to 45 wt% water ice at large grain sizes. In the spectral region beyond 3 μm absorption by hydrated mineral phases is dominant. The non-ice material is spectrally similar to hydrous alteration minerals that are commonly found in certain petrologic types of meteorites. New high-resolution data of Callisto are consistent with the findings of the modeling study. In addition, these new data have identified the presence of a small amount of fine-grained water ice on the leading hemisphere, through a characteristic absorption near 3.4 mum. Variations in the depth of this absorption feature indicate dynamic competition between processes which create and erode fine -grained water ice. Calibration and analysis of spectrometer data from the Mariner 6 and 7 space-craft has provided new information regarding the mineralogy of Mars. Laboratory measurements and theoretical calculations of CO_2 frosts have allowed an analysis of spectra taken over the martian south polar cap. The grain sizes in the seasonal cap are quite large and there may be evidence of contamination by water frost or dust. Analysis of Mariner spectra in non-polar regions have tentatively identified absorption features near 2.76 μm and 5.4 mum. The location of these features, and other absorptions identified from terrestrial observations, are consistent with the spectra of hydrous magnesium carbonates. The hydrous carbonates do not have strong spectral features typically associated with carbonates. Theoretical calculations of mixtures indicates that 10-30wt% of these minerals can be included and still be consistent with spectral observations. These minerals form on earth through weathering of mafic minerals with the production of amorphous iron oxides as byproducts, consistent with both present and inferred past martian environments. The presence of hydrous carbonates can provide a mechanism for having abundant carbonates on Mars while spectral searches for (anhydrous) carbonates will not find any evidence for them.

  19. How to make hypericin water-soluble.

    PubMed

    Kubin, A; Loew, H G; Burner, U; Jessner, G; Kolbabek, H; Wierrani, F

    2008-04-01

    Hypericin, isolated from Hypericum perforatum, is an effective photodynamic substance as demonstrated by various studies. Practical forms of applications of hypericin solutions for systemic use and introduction into body cavities are, however, lacking. We developed an aqueous solution of hypericin non-covalently bound to polyvinylpyrrolidone (PVP). PVP is a poly-N-vinylamide of various degrees of polymerization and forms of intermolecular crosslinks suitable for diagnostic and therapeutic applications. We used PVP (molecular weights of PVP between 10 kD and 40 kD) as a complex forming agent to prepare hypericin for photodynamic therapy and diagnostics. In pure water, hypericin forms aggregates which are non-soluble and non-fluorescent. The hypericin-PVP complex binds more than 1000 mg of hypericin in presence of 100 g PVP or less and is soluble in 1 liter of pure water. Aqueous complex solutions of hypericin-PVP display a characteristic absorption spectrum and fluorescence emission band around 600 nm wavelength. Varying concentrations of hypericin do not cause a blue- or red-shift in the absorption maximum at 595 nm. Excitation at 200 nm to 500 nm leads to emission at 590 nm; a property conducive to diagnostic investigations both in vitro and in vivo. Furthermore, hypericin-PVP exhibits high photostability in the presence of oxygen and broad band light which ensures reproducible photodynamic therapy and diagnosis. Hypericin forms liquid molecular chromophore complexes in water when bound to PVP thus allowing investigations in biological media.

  20. A facility for gas- and condensed-phase measurements behind shock waves

    NASA Astrophysics Data System (ADS)

    Petersen, Eric L.; Rickard, Matthew J. A.; Crofton, Mark W.; Abbey, Erin D.; Traum, Matthew J.; Kalitan, Danielle M.

    2005-09-01

    A shock-tube facility consisting of two, single-pulse shock tubes for the study of fundamental processes related to gas-phase chemical kinetics and the formation and reaction of solid and liquid aerosols at elevated temperatures is described. Recent upgrades and additions include a new high-vacuum system, a new gas-handling system, a new control system and electronics, an optimized velocity-detection scheme, a computer-based data acquisition system, several optical diagnostics, and new techniques and procedures for handling experiments involving gas/powder mixtures. Test times on the order of 3 ms are possible with reflected-shock pressures up to 100 atm and temperatures greater than 4000 K. Applications for the shock-tube facility include the study of ignition delay times of fuel/oxidizer mixtures, the measurement of chemical kinetic reaction rates, the study of fundamental particle formation from the gas phase, and solid-particle vaporization, among others. The diagnostic techniques include standard differential laser absorption, FM laser absorption spectroscopy, laser extinction for particle volume fraction and size, temporally and spectrally resolved emission from gas-phase species, and a scanning mobility particle sizer for particle size distributions. Details on the set-up and operation of the shock tube and diagnostics are given, the results of a detailed uncertainty analysis on the accuracy of the test temperature inferred from the incident-shock velocity are provided, and some recent results are presented.

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