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Sample records for differential base stacking

  1. Manifold gasket accommodating differential movement of fuel cell stack

    DOEpatents

    Kelley, Dana A.; Farooque, Mohammad

    2007-11-13

    A gasket for use in a fuel cell system having at least one externally manifolded fuel cell stack, for sealing the manifold edge and the stack face. In accordance with the present invention, the gasket accommodates differential movement between the stack and manifold by promoting slippage at interfaces between the gasket and the dielectric and between the gasket and the stack face.

  2. Guanine base stacking in G-quadruplex nucleic acids

    PubMed Central

    Lech, Christopher Jacques; Heddi, Brahim; Phan, Anh Tuân

    2013-01-01

    G-quadruplexes constitute a class of nucleic acid structures defined by stacked guanine tetrads (or G-tetrads) with guanine bases from neighboring tetrads stacking with one another within the G-tetrad core. Individual G-quadruplexes can also stack with one another at their G-tetrad interface leading to higher-order structures as observed in telomeric repeat-containing DNA and RNA. In this study, we investigate how guanine base stacking influences the stability of G-quadruplexes and their stacked higher-order structures. A structural survey of the Protein Data Bank is conducted to characterize experimentally observed guanine base stacking geometries within the core of G-quadruplexes and at the interface between stacked G-quadruplex structures. We couple this survey with a systematic computational examination of stacked G-tetrad energy landscapes using quantum mechanical computations. Energy calculations of stacked G-tetrads reveal large energy differences of up to 12 kcal/mol between experimentally observed geometries at the interface of stacked G-quadruplexes. Energy landscapes are also computed using an AMBER molecular mechanics description of stacking energy and are shown to agree quite well with quantum mechanical calculated landscapes. Molecular dynamics simulations provide a structural explanation for the experimentally observed preference of parallel G-quadruplexes to stack in a 5′–5′ manner based on different accessible tetrad stacking modes at the stacking interfaces of 5′–5′ and 3′–3′ stacked G-quadruplexes. PMID:23268444

  3. Stacking with the unnatural DNA base 6-ethynylpyridone

    NASA Astrophysics Data System (ADS)

    Gibson, Douglas J.; van Mourik, Tanja

    2017-01-01

    It was previously reported that the incorporation of 6-ethynylpyridone (E) into a DNA duplex (replacing T in a T:A base pair) leads to DNA duplexes that are more stable than the T:A-containing duplexes. DFT calculations at the M06-2X/6-31+G(d) and BLYP-D3/6-31+G(d) levels on various base pairs, stacked bases and stacked base pairs in continuum solvation water suggest that the observed increased stability of E:A-containing duplexes is due to the combined effects of stronger base pairing and enhanced stacking of the E:A base pair.

  4. Calculated state densities of aperiodic nucleotide base stacks

    NASA Astrophysics Data System (ADS)

    Ye, Yuan-Jie; Chen, Run-Shen; Martinez, Alberto; Otto, Peter; Ladik, Janos

    2000-05-01

    Electronic density of states (DOS) histograms and of the nucleotide base stack regions of a segment of human oncogene (both single and double stranded, in B conformation) and of single-stranded random DNA base stack (also in B conformation), were calculated. The computations were performed with the help of the ab initio matrix block negative factor counting (NFC) method for the DOSs. The neglected effects of the sugar-phosphate chain and the water environment (with the counterions) were assessed on the basis of previous ab initio band structure calculations. Further, in the calculation of single nucleotide base stacks also basis set and correlation effects have been investigated. In the case of a single strand the level spacing widths of the allowed regions and the fundamental gap were calculated also with Clementi's double ς basis and corrected for correlation at the MP2 level. The inverse interaction method was applied for the study of Anderson localization.

  5. Stacked and folded piezoelectrets for vibration-based energy harvesting

    NASA Astrophysics Data System (ADS)

    Sessler, G. M.; Pondrom, P.; Zhang, X.

    2016-08-01

    Vibration-based energy harvesting with piezoelectrets can be significantly improved by using multiple layers of these materials. In particular, folding or stacking of piezoelectrets or a combination of these methods results in increased power output of the energy harvesters. The possibilities of these procedures are explored, together with the effect of seismic mass, resonance frequency, and terminating resistance. It is found that with seismic masses of about 20 g and using radiation-crosslinked polypropylene (IXPP) as a piezoelectret, power outputs of up to 80 µW can be achieved for an acceleration of 1 g. Expected dependencies of generated power on frequency, folding and stacking parameters, in particular number of layers, and on seismic mass, are confirmed.

  6. Investigation of Ruthenium Dissolution in Advanced Membrane Electrode Assemblies for Direct Methanol Based Fuel Cells Stacks

    NASA Technical Reports Server (NTRS)

    Valdez, T. I.; Firdosy, S.; Koel, B. E.; Narayanan, S. R.

    2005-01-01

    This viewgraph presentation gives a detailed review of the Direct Methanol Based Fuel Cell (DMFC) stack and investigates the Ruthenium that was found at the exit of the stack. The topics include: 1) Motivation; 2) Pathways for Cell Degradation; 3) Cell Duration Testing; 4) Duration Testing, MEA Analysis; and 5) Stack Degradation Analysis.

  7. Vibration-based energy harvesting with stacked piezoelectrets

    SciTech Connect

    Pondrom, P.; Hillenbrand, J.; Sessler, G. M.; Bös, J.; Melz, T.

    2014-04-28

    Vibration-based energy harvesters with multi-layer piezoelectrets (ferroelectrets) are presented. Using a simple setup with nine layers and a seismic mass of 8 g, it is possible to generate a power up to 1.3 µW at 140 Hz with an input acceleration of 1g. With better coupling between seismic mass and piezoelectret, and thus reduced damping, the power output of a single-layer system is increased to 5 µW at 700 Hz. Simulations indicate that for such improved setups with 10-layer stacks, utilizing seismic masses of 80 g, power levels of 0.1 to 1 mW can be expected below 100 Hz.

  8. Biospeckle image stack process based on artificial neural networks.

    PubMed

    Meschino, Gustavo; Murialdo, Silvia; Passoni, Lucia; Rabal, Hector; Trivi, Marcelo

    2010-01-01

    This paper proposes the identification of regions of interest in biospeckle patterns using unsupervised neural networks of the type Self-Organizing Maps. Segmented images are obtained from the acquisition and processing of laser speckle sequences. The dynamic speckle is a phenomenon that occurs when a beam of coherent light illuminates a sample in which there is some type of activity, not visible, which results in a variable pattern over time. In this particular case the method is applied to the evaluation of bacterial chemotaxis. Image stacks provided by a set of experiments are processed to extract features of the intensity dynamics. A Self-Organizing Map is trained and its cells are colored according to a criterion of similarity. During the recall stage the features of patterns belonging to a new biospeckle sample impact on the map, generating a new image using the color of the map cells impacted by the sample patterns. It is considered that this method has shown better performance to identify regions of interest than those that use a single descriptor. To test the method a chemotaxis assay experiment was performed, where regions were differentiated according to the bacterial motility within the sample.

  9. Pre-stack time migration based on stationary-phase stacking in the dip-angle domain

    NASA Astrophysics Data System (ADS)

    Xu, Jincheng; Zhang, Hao; Zhang, Jianfeng; Li, Zhengwei; Liu, Wei

    2017-03-01

    The Kirchhoff-type migration approach often suffers from migration noise, aliasing artifacts due to operator error, or weak noise from a truncated aperture or pre-stacked data. These noises can be attenuated by using stationary-phase migration, which only stacks the reflection energy within the Fresnel zone rather than along the whole migration aperture, and therefore obtains a higher signal-to-noise ratio (SNR) for the migration results. This paper proposes a new implementation for the pre-stack time migration (PSTM) approach, which is based on stationary-phase stacking in the dip-angle domain. This implementation generates a pair of migrated dip-angle gathers in the image domain using PSTM. We can obtain the dip-angle field corresponding to the contribution of the Fresnel zones from the migrated dip-angle gathers, which allows us to remove noise outside the Fresnel zones and significantly improves the SNR of the image gathers. The proposed stationary-phase PSTM could effectively handle the problem of low SNR in migrated images, especially in the presence of steeply dipping structures. We test the method by applying stationary-phase PSTM to an overthrust model example and a three-dimensional field data set, and both examples demonstrate that the resulting images are of good quality with the method.

  10. Theoretical calculations of base-base interactions in nucleic acids: II. Stacking interactions in polynucleotides.

    PubMed Central

    Gupta, G; Sasisekharan, V

    1978-01-01

    Base-base interactions were computed for single- and double stranded poly,ucleotides, for all possible base sequences. In each case, both right and left stacking arrangements are energetically possible. The preference of one over the other depends upon the base-sequence and the orientation of the bases with respect to helix-axis. Inverted stacking arrangement is also energetically possible for both single- and double-stranded polynucleotides. Finally, interacting energies of a regular duplex and the alternative structures were compared. It was found that the type II model is energetically more favourable than the rest. PMID:662698

  11. A Bidirectional Optical Module Based on Stacked Planar Optical Circuit

    NASA Astrophysics Data System (ADS)

    Mizuno, Rogerio Jun; Aoki, Yasuhiko; Shimada, Yuji; Iga, Kenichi

    2000-03-01

    In this paper, a bidirectional optical module based on a stacked planar optical circuit (SPOC) concept to perform a wavelength division multiplexing (WDM) function is described. The module consists of an optical chip which incorporates planar microlens (PML) arrays and nonpolarizing 1.31/1.55 μm WDM dielectric-multilayer filters. Module design and theoretical estimation of loss tolerance were conducted. From preliminary experiments, the feasibility of SPOC modules was confirmed. A fabricated WDM filter showed a small polarization-dependent loss (PDL) of about 0.48 dB and 0.05 dB for the wavelengths of 1.31 μm and 1.55 μm, respectively. Channel crosstalk and PDL for the SPOC module were characterized by means of discrete filter devices. For the 1.55 μm downstream (1.31 μm downstream/upstream) channel, a crosstalk as low as {-}40 dB ({-}26 dB) and a PDL less than 0.23 dB (0.53 dB) were achieved.

  12. Geometric Patterns for Neighboring Bases Near the Stacked State in Nucleic Acid Strands.

    PubMed

    Sedova, Ada; Banavali, Nilesh K

    2017-03-14

    Structural variation in base stacking has been analyzed frequently in isolated double helical contexts for nucleic acids, but not as often in nonhelical geometries or in complex biomolecular environments. In this study, conformations of two neighboring bases near their stacked state in any environment are comprehensively characterized for single-strand dinucleotide (SSD) nucleic acid crystal structure conformations. An ensemble clustering method is used to identify a reduced set of representative stacking geometries based on pairwise distances between select atoms in consecutive bases, with multiple separable conformational clusters obtained for categories divided by nucleic acid type (DNA/RNA), SSD sequence, stacking face orientation, and the presence or absence of a protein environment. For both DNA and RNA, SSD conformations are observed that are either close to the A-form, or close to the B-form, or intermediate between the two forms, or further away from either form, illustrating the local structural heterogeneity near the stacked state. Among this large variety of distinct conformations, several common stacking patterns are observed between DNA and RNA, and between nucleic acids in isolation or in complex with proteins, suggesting that these might be stable stacking orientations. Noncanonical face/face orientations of the two bases are also observed for neighboring bases in the same strand, but their frequency is much lower, with multiple SSD sequences across categories showing no occurrences of such unusual stacked conformations. The resulting reduced set of stacking geometries is directly useful for stacking-energy comparisons between empirical force fields, prediction of plausible localized variations in single-strand structures near their canonical states, and identification of analogous stacking patterns in newly solved nucleic acid containing structures.

  13. Dynamic fuel cell stack model for real-time simulation based on system identification

    NASA Astrophysics Data System (ADS)

    Meiler, M.; Schmid, O.; Schudy, M.; Hofer, E. P.

    The authors have been developing an empirical mathematical model to predict the dynamic behaviour of a polymer electrolyte membrane fuel cell (PEMFC) stack. Today there is a great number of models, describing steady-state behaviour of fuel cells by estimating the equilibrium voltage for a certain set of operating parameters, but models capable of predicting the transient process between two steady-state points are rare. However, in automotive applications round about 80% of operating situations are dynamic. To improve the reliability of fuel cell systems by model-based control for real-time simulation dynamic fuel cell stack model is needed. Physical motivated models, described by differential equations, usually are complex and need a lot of computing time. To meet the real-time capability the focus is set on empirical models. Fuel cells are highly nonlinear systems, so often used auto-regressive (AR), output-error (OE) or Box-Jenkins (BJ) models do not accomplish satisfying accuracy. Best results are achieved by splitting the behaviour into a nonlinear static and a linear dynamic subsystem, a so-called Uryson-Model. For system identification and model validation load steps with different amplitudes are applied to the fuel cell stack at various operation points and the voltage response is recorded. The presented model is implemented in MATLAB environment and has a computing time of less than 1 ms per step on a standard desktop computer with a 2.8 MHz CPU and 504 MB RAM. Lab tests are carried out at DaimlerChrysler R&D Centre with DaimlerChrysler PEMFC hardware and a good agreement is found between model simulations and lab tests.

  14. Diffraction based overlay metrology: accuracy and performance on front end stack

    NASA Astrophysics Data System (ADS)

    Leray, Philippe; Cheng, Shaunee; Kandel, Daniel; Adel, Michael; Marchelli, Anat; Vakshtein, Irina; Vasconi, Mauro; Salski, Bartlomiej

    2008-03-01

    The overlay metrology budget is typically 1/10 of the overlay control budget resulting in overlay metrology total measurement uncertainty requirements of 0.57 nm for the most challenging use cases of the 32nm technology generation. Theoretical considerations show that overlay technology based on differential signal scatterometry (SCOL TM) has inherent advantages, which will allow it to achieve the 32nm technology generation requirements and go beyond it. In this work we present results of an experimental and theoretical study of SCOL. We present experimental results, comparing this technology with the standard imaging overlay metrology. In particular, we present performance results, such as precision and tool induced shift, for different target designs. The response to a large range of induced misalignment is also shown. SCOL performance on these targets for a real stack is reported. We also show results of simulations of the expected accuracy and performance associated with a variety of scatterometry overlay target designs. The simulations were carried out on several stacks including FEOL and BEOL materials. The inherent limitations and possible improvements of the SCOL technology are discussed. We show that with the appropriate target design and algorithms, scatterometry overlay achieves the accuracy required for future technology generations.

  15. Unveiling One-Dimensional Supramolecular Structures Formed Through π-π Stacking of Phenothiazines by Differential Pulse Voltammetry.

    PubMed

    Carvalho, Fernando R; Zampieri, Eduardo H; Caetano, Wilker; Silva, Rafael

    2017-03-09

    Organic based nanomaterials can be self-assembled by strong and directional intermolecular forces as π-π interactions are. Experimental information about the stability, size and geometry of those formed structures are very limited for species which easily aggregates even at very low concentration. Differential pulse voltammetry can unveil the formation, growth and also the stability window of ordered one-dimensional, lamellar, self-aggregates formed by supramolecular π stacking of phenothiazines at micromolar (10-6 mol·L-1) concentration. The self-diffusion features of the species at different concentration were determined by DPV and used to probe the π staking process through the concept of the frictional resistance. It is observed that toluidine blue and methylene blue start to self-aggregate around 9 µmol·L-1 and the self-aggregation process occurs by one-dimensional growth as the concentration of the phenothiazines is increased up to around 170 µmol·L-1 for toluidine blue O and 200 µmol·L-1 for methylene blue. At higher concentration the aggregation process leads to structures with lower anisometry.

  16. Free energy analysis and mechanism of base pair stacking in nicked DNA

    PubMed Central

    Häse, Florian; Zacharias, Martin

    2016-01-01

    The equilibrium of stacked and unstacked base pairs is of central importance for all nucleic acid structure formation processes. The stacking equilibrium is influenced by intramolecular interactions between nucleosides but also by interactions with the solvent. Realistic simulations on nucleic acid structure formation and flexibility require an accurate description of the stacking geometry and stability and its sequence dependence. Free energy simulations have been conducted on a series of double stranded DNA molecules with a central strand break (nick) in one strand. The change in free energy upon unstacking was calculated for all ten possible base pair steps using umbrella sampling along a center-of-mass separation coordinate and including a comparison of different water models. Comparison to experimental studies indicates qualitative agreement of the stability order but a general overestimation of base pair stacking interactions in the simulations. A significant dependence of calculated nucleobase stacking free energies on the employed water model was observed with the tendency of stacking free energies being more accurately reproduced by more complex water models. The simulation studies also suggest a mechanism of stacking/unstacking that involves significant motions perpendicular to the reaction coordinate and indicate that the equilibrium nicked base pair step may slightly differ from regular B-DNA geometry in a sequence-dependent manner. PMID:27407106

  17. Field Effect in Graphene-Based van der Waals Heterostructures: Stacking Sequence Matters.

    PubMed

    Stradi, Daniele; Papior, Nick R; Hansen, Ole; Brandbyge, Mads

    2017-03-13

    Stacked van der Waals (vdW) heterostructures where semiconducting two-dimensional (2D) materials are contacted by overlaid graphene electrodes enable atomically thin, flexible electronics. We use first-principles quantum transport simulations of graphene-contacted MoS2 devices to show how the transistor effect critically depends on the stacking configuration relative to the gate electrode. We can trace this behavior to the stacking-dependent response of the contact region to the capacitive electric field induced by the gate. The contact resistance is a central parameter and our observation establishes an important design rule for ultrathin devices based on 2D atomic crystals.

  18. Analyses of Large Coal-Based SOFCs for High Power Stack Block Development

    SciTech Connect

    Recknagle, Kurtis P; Koeppel, Brian J

    2010-10-01

    This report summarizes the numerical modeling and analytical efforts for SOFC stack development performed for the coal-based SOFC program. The stack modeling activities began in 2004, but this report focuses on the most relevant results obtained since August 2008. This includes the latter half of Phase-I and all of Phase-II activities under technical guidance of VPS and FCE. The models developed to predict the thermal-flow-electrochemical behaviors and thermal-mechanical responses of generic planar stacks and towers are described. The effects of cell geometry, fuel gas composition, on-cell reforming, operating conditions, cell performance, seal leak, voltage degradation, boundary conditions, and stack height are studied. The modeling activities to evaluate and achieve technical targets for large stack blocks are described, and results from the latest thermal-fluid-electrochemical and structural models are summarized. Modeling results for stack modifications such as scale-up and component thickness reduction to realize cost reduction are presented. Supporting modeling activities in the areas of cell fabrication and loss of contact are also described.

  19. Contractive tension force stack actuator based on soft dielectric EAP

    NASA Astrophysics Data System (ADS)

    Kovacs, Gabor; Düring, Lukas

    2009-03-01

    capability between each layer of the actuator. Due to the stack configuration of the actuator the commonly used and pre-strained acrylic film was replaced by the stress-free IPN modified acrylic film in order to eliminate the need for external pre-strain-supporting structures. Introductorily, the specific problems on conventional expanding actuators are discussed and the aims for contractive tension force actuators are specified. Then some structural design parameters are addressed in order to achieve a high rate of yield and reliable working principle. In the main part of the study the manufacturing process of the actuators and some measurement results and experiences are discussed in detail.

  20. Electron attachment to the cytosine-centered DNA single strands: does base stacking matter?

    PubMed

    Gu, Jiande; Wang, Jing; Leszczynski, Jerzy

    2012-02-02

    Electron attachment to the trimer of nucleotide, dGpdCpdG, has been investigated by a quantum mechanical approach at a reliable level of theory. The study of the electron attached dGpdCpdG species demonstrates that cytosine contained DNA single strands have a strong tendency to capture low-energy electrons and to form electronically stable cytosine-centered radical anions. The comparative study of the model molecules pdCpdG and dGpdCp reveals that base stacking has little contribution to the adiabatic electron affinity (AEA) of cytosine in DNA single strands. Additionally, the base-base stacking does not affect the vertical detachment energy (VDE) of the cytosine-centered radicals. Intrastrand H-bonding is found to be critical in increasing the values of the AEA and VDE. However, base-base stacking is revealed to be important in enlarging the vertical electron affinity (VEA) of cytosine. The electron attachment to the cytosine moiety intensifies the intrastrand H-bonding between the neighboring G and C bases. This process disrupts the base-base stacking interaction in the radical anion of dGpdCpdG.

  1. Stacked Deck: An Effective, School-Based Program for the Prevention of Problem Gambling

    ERIC Educational Resources Information Center

    Williams, Robert J.; Wood, Robert T.; Currie, Shawn R.

    2010-01-01

    School-based prevention programs are an important component of problem gambling prevention, but empirically effective programs are lacking. Stacked Deck is a set of 5-6 interactive lessons that teach about the history of gambling; the true odds and "house edge"; gambling fallacies; signs, risk factors, and causes of problem gambling; and…

  2. Process-induced positive charges in Hf-based gate stacks

    NASA Astrophysics Data System (ADS)

    Zhao, C. Z.; Zhang, J. F.; Chang, M. H.; Peaker, A. R.; Hall, S.; Groeseneken, G.; Pantisano, L.; De Gendt, S.; Heyns, M.

    2008-01-01

    Hf-based gate stacks will replace SiON as a gate dielectric even though our understanding of them is incomplete. For an unoptimized SiO2 layer, an exposure to H2 at a temperature over 450 °C can lead to positive charging. In this work, we will show that a thermal exposure of Hf-based gate stacks to H2 can also induce a large amount of positive charge (˜1013 cm-2). There is little information available on this process-induced positive charge (PIPC) and the objective of this work is to fill this knowledge gap. The work is divided into two parts: an investigation of the features and properties of PIPC, followed by an exploration of its dependence on process conditions. It will be shown that PIPC does not originate from the generation of interface states, is stable both thermally and electrically, and has a large sample-to-sample variation. It consists of two components: fixed and mobile. Regarding its dependence on process conditions, PIPC occurs in both HfO2 and Hf-silicate stacks, in devices with either TaN or poly-Si gates, and in both p metal-oxide-semiconductor field-effect transistors (pMOSFETs) and nMOSFETs. PIPC is generally enhanced by nitridation, although it can also be observed in some Hf-based gate stacks without nitridation.

  3. Operational logs analysis at ALMA observatory based on ELK stack

    NASA Astrophysics Data System (ADS)

    Gil, Juan P.; Reveco, Johnny; Shen, Tzu-Chiang

    2016-07-01

    During operations, the ALMA observatory generates a huge amount of logs which contain not only valuable information related to specific failures but also for long term performance analysis. We implemented a big data solution based on Elasticsearch, Logstash and Kibana. They are configured as decoupled system which causes zero impact on the existent operations. It is able to keep more than six months of operation logs online. In this paper, we'll describe this infrastructure, applications built on top of it, and the problems that we faced during its implementation.

  4. Modeling the bandstructures of B-DNA base stacks

    NASA Astrophysics Data System (ADS)

    Rengifo, E.; Murillo, G.; Arce, J. C.

    2013-05-01

    A pseudohelical approximation for the calculation of the bandstructures of DNA base homostacks in B conformation is introduced. It consists of choosing a unit cell of only two nucleobases with relative parallel displacement and twist that locally mimic the helical conformation. It is tested employing the extended Hückel method with a unique Wolfsberg-Helmholtz parameter. The resulting bandgaps and ionization potential trend agree well with the ones reported in the literature employing the full screw-axis symmetry and higher levels of theory. The electron and hole effective masses extracted from the bandstructures follow the same trends as the experimentally reported mobilities.

  5. Prognostics of Proton Exchange Membrane Fuel Cells stack using an ensemble of constraints based connectionist networks

    NASA Astrophysics Data System (ADS)

    Javed, Kamran; Gouriveau, Rafael; Zerhouni, Noureddine; Hissel, Daniel

    2016-08-01

    Proton Exchange Membrane Fuel Cell (PEMFC) is considered the most versatile among available fuel cell technologies, which qualify for diverse applications. However, the large-scale industrial deployment of PEMFCs is limited due to their short life span and high exploitation costs. Therefore, ensuring fuel cell service for a long duration is of vital importance, which has led to Prognostics and Health Management of fuel cells. More precisely, prognostics of PEMFC is major area of focus nowadays, which aims at identifying degradation of PEMFC stack at early stages and estimating its Remaining Useful Life (RUL) for life cycle management. This paper presents a data-driven approach for prognostics of PEMFC stack using an ensemble of constraint based Summation Wavelet- Extreme Learning Machine (SW-ELM) models. This development aim at improving the robustness and applicability of prognostics of PEMFC for an online application, with limited learning data. The proposed approach is applied to real data from two different PEMFC stacks and compared with ensembles of well known connectionist algorithms. The results comparison on long-term prognostics of both PEMFC stacks validates our proposition.

  6. An extended DNA structure through deoxyribose-base stacking induced by RecA protein

    PubMed Central

    Nishinaka, Taro; Ito, Yutaka; Yokoyama, Shigeyuki; Shibata, Takehiko

    1997-01-01

    The family of proteins that are homologous to RecA protein of Escherichia coli is essential to homologous genetic recombination in various organisms including viruses, bacteria, lower eukaryotes, and mammals. In the presence of ATP (or ATPγS), these proteins form helical filaments containing single-stranded DNA at the center. The single-stranded DNA bound to RecA protein is extended 1.5 times relative to B-form DNA with the same sequence, and the extension is critical to pairing with homologous double-stranded DNA. This pairing reaction, called homologous pairing, is a key reaction in homologous recombination. In this NMR study, we determined a three-dimensional structure of the single-stranded DNA bound to RecA protein. The DNA structure contains novel deoxyribose-base stacking in which the 2′-methylene moiety of each deoxyribose is placed above the base of the following residue, instead of normal stacking of adjacent bases. As a result of this deoxyribose-base stacking, bases of the single-stranded DNA are spaced out nearly 5 Å. Thus, this novel structure well explains the axial extension of DNA in the RecA-filaments relative to B-form DNA and leads to a possible interpretation of the role of this extension in homologous pairing. PMID:9192615

  7. LASERS 808-nm laser diode bars based on epitaxially stacked double heterostructures

    NASA Astrophysics Data System (ADS)

    Davydova, Evgeniya I.; Konyaev, V. P.; Ladugin, M. A.; Lebedeva, E. I.; Marmalyuk, Aleksandr A.; Padalitsa, A. A.; Petrov, S. V.; Sapozhnikov, S. M.; Simakov, V. A.; Uspenskii, Mikhail B.; Yarotskaya, I. V.

    2010-10-01

    We have fabricated and investigated linear arrays of single laser diodes (LDs) and epitaxially stacked double LDs based on AlGaAs/GaAs heterostructures emitting in the 808-nm range. The power — current characteristic of the double-LD bars has a slope of 2.18 W A-1, which is almost twice that of the single-LD bars (1.16 W A-1). The voltage drop across the former bars is also larger. At a pump current of 60 A, the output power of 5-mm-long arrays of LDs based on epitaxially stacked double heterostructures is 100 W under quasi-cw pumping, which is a factor of 1.8 above that of the single-LD bars under identical conditions.

  8. B3LYP, BLYP and PBE DFT band structures of the nucleotide base stacks

    NASA Astrophysics Data System (ADS)

    Szekeres, Zs; Bogár, F.; Ladik, J.

    DFT crystal orbital (band structure) calculations have been performed for the nucleotide base stacks of cytosine, thymine, adenine, and guanine arranged in DNA B geometry. The band structures obtained with PBE, BLYP, and B3LYP functionals are presented and compared to other related experimental and theoretical results. The influence of the quality of the basis set on the fundamental gap values was also investigated using Clementi's double ζ, 6-31G and 6-31G* basis sets.

  9. Development of an automatic subsea blowout preventer stack control system using PLC based SCADA.

    PubMed

    Cai, Baoping; Liu, Yonghong; Liu, Zengkai; Wang, Fei; Tian, Xiaojie; Zhang, Yanzhen

    2012-01-01

    An extremely reliable remote control system for subsea blowout preventer stack is developed based on the off-the-shelf triple modular redundancy system. To meet a high reliability requirement, various redundancy techniques such as controller redundancy, bus redundancy and network redundancy are used to design the system hardware architecture. The control logic, human-machine interface graphical design and redundant databases are developed by using the off-the-shelf software. A series of experiments were performed in laboratory to test the subsea blowout preventer stack control system. The results showed that the tested subsea blowout preventer functions could be executed successfully. For the faults of programmable logic controllers, discrete input groups and analog input groups, the control system could give correct alarms in the human-machine interface.

  10. The influence of arene-ring size on stacking interaction with canonical base pairs

    NASA Astrophysics Data System (ADS)

    Formánek, Martin; Burda, Jaroslav V.

    2014-04-01

    Stacking interactions between aromatic molecules (benzene, p-cymene, biphenyl, and di- and tetra-hydrogen anthracene) and G.C and A.T canonical Watson-Crick (WC) base pairs are explored. Two functionals with dispersion corrections: ω-B97XD and B3LYP-D3 are used. For a comparison also the MP2 and B3LYP-D3/PCM methods were used for the most stable p-cymene…WC geometries. It was found that the stacking interaction increases with the size of π-conjugation system. Its extent is in agreement with experimental finding on anticancer activity of Ru(II) piano-stool complexes where intercalation of these aromatic molecules should play an important role. The explored structures are considered as ternary system so that decomposition of the interaction energy to pairwise and non-additivity contributions is also examined.

  11. Acupuncture injection for field amplified sample stacking and glass microchip-based capillary gel electrophoresis.

    PubMed

    Ha, Ji Won; Hahn, Jong Hoon

    2017-02-01

    Acupuncture sample injection is a simple method to deliver well-defined nanoliter-scale sample plugs in PDMS microfluidic channels. This acupuncture injection method in microchip CE has several advantages, including minimization of sample consumption, the capability of serial injections of different sample solutions into the same microchannel, and the capability of injecting sample plugs into any desired position of a microchannel. Herein, we demonstrate that the simple and cost-effective acupuncture sample injection method can be used for PDMS microchip-based field amplified sample stacking in the most simplified straight channel by applying a single potential. We achieved the increase in electropherogram signals for the case of sample stacking. Furthermore, we present that microchip CGE of ΦX174 DNA-HaeⅢ digest can be performed with the acupuncture injection method on a glass microchip while minimizing sample loss and voltage control hardware.

  12. Complete optical stack modeling for CMOS-based medical x-ray detectors

    NASA Astrophysics Data System (ADS)

    Zyazin, Alexander S.; Peters, Inge M.

    2015-03-01

    We have developed a simulation tool for modeling the performance of CMOS-based medical x-ray detectors, based on the Monte Carlo toolkit GEANT4. Following the Fujita-Lubberts-Swank approach recently reported by Star-Lack et al., we calculate modulation transfer function MTF(f), noise power spectrum NPS(f) and detective quantum efficiency DQE(f) curves. The complete optical stack is modeled, including scintillator, fiber optic plate (FOP), optical adhesive and CMOS image sensor. For critical parts of the stack, detailed models have been developed, taking into account their respective microstructure. This includes two different scintillator types: Gd2O2S:Tb (GOS) and CsI:Tl. The granular structure of the former is modeled using anisotropic Mie scattering. The columnar structure of the latter is introduced into calculations directly, using the parameterization capabilities of GEANT4. The underlying homogeneous CsI layer is also incorporated into the model as well as the optional reflective layer on top of the scintillator screen or the protective polymer top coat. The FOP is modeled as an array of hexagonal bundles of fibers. The simulated CMOS stack consists of layers of Si3N4 and SiO2 on top of a silicon pixel array. The model is validated against measurements of various test detector structures, using different x-ray spectra (RQA5 and RQA-M2), showing good match between calculated and measured MTF(f) and DQE(f) curves.

  13. DNA base pair stacks with high electric conductance: a systematic structural search.

    PubMed

    Berlin, Yuri A; Voityuk, Alexander A; Ratner, Mark A

    2012-09-25

    We report a computational search for DNA π-stack structures exhibiting high electric conductance in the hopping regime, based on the INDO/S calculations of electronic coupling and the method of data analysis called k-means clustering. Using homogeneous poly(G)-poly(C) and poly(A)-poly(T) stacks as the simplest structural models, we identify the configurations of neighboring G:C and A:T pairs that allow strong electronic coupling and, therefore, molecular electric conductance much larger than the values reported for the corresponding reference systems in the literature. A computational approach for modeling the impact of thermal fluctuations on the averaged dimer structure was also proposed and applied to the [(G:C),(G:C)] and [(A:T),(A:T)] duplexes. The results of this work may provide guidance for the construction of DNA devices and DNA-based elements of nanoscale molecular circuits. Several factors that cause changes of step parameters favorable to the formation of the predicted stack conformation with high electric conductance of DNA molecules are also discussed; favorable geometries may enhance the conductivity by factors as large as 15.

  14. Mechanical properties of base-modified DNA are not strictly determined by base stacking or electrostatic interactions.

    PubMed

    Peters, Justin P; Mogil, Lauren S; McCauley, Micah J; Williams, Mark C; Maher, L James

    2014-07-15

    This work probes the mystery of what balance of forces creates the extraordinary mechanical stiffness of DNA to bending and twisting. Here we explore the relationship between base stacking, functional group occupancy of the DNA minor and major grooves, and DNA mechanical properties. We study double-helical DNA molecules substituting either inosine for guanosine or 2,6-diaminopurine for adenine. These DNA variants, respectively, remove or add an amino group from the DNA minor groove, with corresponding changes in hydrogen-bonding and base stacking energy. Using the techniques of ligase-catalyzed cyclization kinetics, atomic force microscopy, and force spectroscopy with optical tweezers, we show that these DNA variants have bending persistence lengths within the range of values reported for sequence-dependent variation of the natural DNA bases. Comparison with seven additional DNA variants that modify the DNA major groove reveals that DNA bending stiffness is not correlated with base stacking energy or groove occupancy. Data from circular dichroism spectroscopy indicate that base analog substitution can alter DNA helical geometry, suggesting a complex relationship among base stacking, groove occupancy, helical structure, and DNA bend stiffness.

  15. A high efficiency label-free photonic biosensor based on vertically stacked ring resonators

    NASA Astrophysics Data System (ADS)

    Campanella, C. E.; Campanella, C. M.; De Leonardis, F.; Passaro, V. M. N.

    2014-09-01

    In this paper we propose an optical biosensor based on two vertically stacked Silicon on Insulator (SOI) micro-ring resonators interacting with a microfluidic ring channel. This device behaves as a resonant optical coupler and it is very sensitive to the variation of the coupling coefficient between the two vertically stacked ring resonators. A ring microfluidic channel is proposed in the coupling region between the two vertically stacked ring resonators. The inner walls of the channel are funzionalized in order to the trap a specific biological species. Assuming a biotin-streptavidin system, the straptividin trapping gives rise to a change of the biological thickness of about 3 nm. This thickness increase of the deposited layer leads to a consequent change in the coupling strength between the two rings. These theoretical predictions have been validated by using both 3D Finite-Difference Time-Domain (FDTD) and 3D full-vectorial Finite Element Method (FEM) approaches. Moreover, by appropriately choosing the design parameters of the micro-resonant structure, we evaluate a sensitivity of the spectral response to the streptavidin adlayer variation of about 20% nm-1 for TE polarization and 34% nm-1 for TM polarization, which represents an important achievement to obtain selective SOI bio-sensors with ultra-high resolution.

  16. Porous Structures in Stacked, Crumpled and Pillared Graphene-Based 3D Materials

    PubMed Central

    Guo, Fei; Creighton, Megan; Chen, Yantao; Hurt, Robert; Külaots, Indrek

    2015-01-01

    Graphene, an atomically thin material with the theoretical surface area of 2600 m2g−1, has great potential in the fields of catalysis, separation, and gas storage if properly assembled into functional 3D materials at large scale. In ideal non-interacting ensembles of non-porous multilayer graphene plates, the surface area can be adequately estimated using the simple geometric law ~ 2600 m2g−1/N, where N is the number of graphene sheets per plate. Some processing operations, however, lead to secondary plate-plate stacking, folding, crumpling or pillaring, which give rise to more complex structures. Here we show that bulk samples of multilayer graphene plates stack in an irregular fashion that preserves the 2600/N surface area and creates regular slot-like pores with sizes that are multiples of the unit plate thickness. In contrast, graphene oxide deposits into films with massive area loss (2600 to 40 m2g−1) due to nearly perfect alignment and stacking during the drying process. Pillaring graphene oxide sheets by co-deposition of colloidal-phase particle-based spacers has the potential to partially restore the large monolayer surface. Surface areas as high as 1000 m2g−1 are demonstrated here through colloidal-phase deposition of graphene oxide with water-dispersible aryl-sulfonated ultrafine carbon black as a pillaring agent. PMID:26478597

  17. Detecting Theft of Java Applications via a Static Birthmark Based on Weighted Stack Patterns

    NASA Astrophysics Data System (ADS)

    Lim, Hyun-Il; Park, Heewan; Choi, Seokwoo; Han, Taisook

    A software birthmark means the inherent characteristics of a program that can be used to identify the program. A comparison of such birthmarks facilitates the detection of software theft. In this paper, we propose a static Java birthmark based on a set of stack patterns, which reflect the characteristic of Java applications. A stack pattern denotes a sequence of bytecodes that share their operands through the operand stack. A weight scheme is used to balance the influence of each bytecode in a comparison of the birthmarks. We evaluate the proposed birthmark with respect to two properties required for a birthmark: credibility and resilience. The empirical results show that the proposed birthmark is highly credible and resilient to program transformation. We also compare the proposed birthmark with existing birthmarks, such as that of Tamada et al. and the k-gram birthmark. The experimental results show that the proposed birthmark is more stable than the birthmarks in terms of resilience to program transformation. Thus, the proposed birthmark can provide more reliable evidence of software theft when the software is modified by someone other than author.

  18. Efficiency Enhancement of InGaN-Based Solar Cells via Stacking Layers of Light-Harvesting Nanospheres

    PubMed Central

    Al-Amri, Amal M.; Fu, Po-Han; Lai, Kun-Yu; Wang, Hsin-Ping; Li, Lain-Jong; He, Jr-Hau

    2016-01-01

    An effective light-harvesting scheme for InGaN-based multiple quantum well solar cells is demonstrated using stacking layers of polystyrene nanospheres. Light-harvesting efficiencies on the solar cells covered with varied stacks of nanospheres are evaluated through numerical and experimental methods. The numerical simulation reveals that nanospheres with 3 stacking layers exhibit the most improved optical absorption and haze ratio as compared to those obtained by monolayer nanospheres. The experimental demonstration, agreeing with the theoretical analyses, shows that the application of 3-layer nanospheres improves the conversion efficiency of the solar cell by ~31%. PMID:27339612

  19. Creep Mechanisms of a Ni-Co-Based-Wrought Superalloy with Low Stacking Fault Energy

    NASA Astrophysics Data System (ADS)

    Tian, Chenggang; Xu, Ling; Cui, Chuanyong; Sun, Xiaofeng

    2015-10-01

    In order to study the influences of stress and temperature on the creep deformation mechanisms of a newly developed Ni-Co-based superalloy with low stacking fault energy, creep experiments were carried out under a stress range of 345 to 840 MPa and a temperature range of 923 K to 1088 K (650 °C to 815 °C). The mechanisms operated under the various creep conditions were identified and the reasons for their transformation were well discussed. A deformation mechanism map under different creep conditions was summarized, which provides a qualitative representation of the operative creep mechanisms as a function of stress and temperature.

  20. A method to estimate emission rates from industrial stacks based on neural networks.

    PubMed

    Olcese, Luis E; Toselli, Beatriz M

    2004-11-01

    This paper presents a technique based on artificial neural networks (ANN) to estimate pollutant rates of emission from industrial stacks, on the basis of pollutant concentrations measured on the ground. The ANN is trained on data generated by the ISCST3 model, widely accepted for evaluation of dispersion of primary pollutants as a part of an environmental impact study. Simulations using theoretical values and comparison with field data are done, obtaining good results in both cases at predicting emission rates. The application of this technique would allow the local environment authority to control emissions from industrial plants without need of performing direct measurements inside the plant.

  1. Extracting Drug-Drug Interaction from the Biomedical Literature Using a Stacked Generalization-Based Approach

    PubMed Central

    He, Linna; Yang, Zhihao; Zhao, Zhehuan; Lin, Hongfei; Li, Yanpeng

    2013-01-01

    Drug-drug interaction (DDI) detection is particularly important for patient safety. However, the amount of biomedical literature regarding drug interactions is increasing rapidly. Therefore, there is a need to develop an effective approach for the automatic extraction of DDI information from the biomedical literature. In this paper, we present a Stacked Generalization-based approach for automatic DDI extraction. The approach combines the feature-based, graph and tree kernels and, therefore, reduces the risk of missing important features. In addition, it introduces some domain knowledge based features (the keyword, semantic type, and DrugBank features) into the feature-based kernel, which contribute to the performance improvement. More specifically, the approach applies Stacked generalization to automatically learn the weights from the training data and assign them to three individual kernels to achieve a much better performance than each individual kernel. The experimental results show that our approach can achieve a better performance of 69.24% in F-score compared with other systems in the DDI Extraction 2011 challenge task. PMID:23785452

  2. Stacked Deck: an effective, school-based program for the prevention of problem gambling.

    PubMed

    Williams, Robert J; Wood, Robert T; Currie, Shawn R

    2010-06-01

    School-based prevention programs are an important component of problem gambling prevention, but empirically effective programs are lacking. Stacked Deck is a set of 5-6 interactive lessons that teach about the history of gambling; the true odds and "house edge"; gambling fallacies; signs, risk factors, and causes of problem gambling; and skills for good decision making and problem solving. An overriding theme of the program is to approach life as a "smart gambler" by determining the odds and weighing the pros versus cons of your actions. A total of 949 grade 9-12 students in 10 schools throughout southern Alberta received the program and completed baseline and follow-up measures. These students were compared to 291 students in 4 control schools. Four months after receiving the program, students in the intervention group had significantly more negative attitudes toward gambling, improved knowledge about gambling and problem gambling, improved resistance to gambling fallacies, improved decision making and problem solving, decreased gambling frequency, and decreased rates of problem gambling. There was no change in involvement in high risk activities or money lost gambling. These results indicate that Stacked Deck is a promising curriculum for the prevention of problem gambling.

  3. Adaptive Stacked Generalization for Multiclass Motor Imagery-Based Brain Computer Interfaces.

    PubMed

    Nicolas-Alonso, Luis F; Corralejo, Rebeca; Gomez-Pilar, Javier; Álvarez, Daniel; Hornero, Roberto

    2015-07-01

    Practical motor imagery-based brain computer interface (MI-BCI) applications are limited by the difficult to decode brain signals in a reliable way. In this paper, we propose a processing framework to address non-stationarity, as well as handle spectral, temporal, and spatial characteristics associated with execution of motor tasks. Stacked generalization is used to exploit the power of classifier ensembles for combining information coming from multiple sources and reducing the existing uncertainty in EEG signals. The outputs of several regularized linear discriminant analysis (RLDA) models are combined to account for temporal, spatial, and spectral information. The resultant algorithm is called stacked RLDA (SRLDA). Additionally, an adaptive processing stage is introduced before classification to reduce the harmful effect of intersession non-stationarity. The benefits of the proposed method are evaluated on the BCI Competition IV dataset 2a. We demonstrate its effectiveness in binary and multiclass settings with four different motor imagery tasks: left-hand, right-hand, both feet, and tongue movements. The results show that adaptive SRLDA outperforms the winner of the competition and other approaches tested on this multiclass dataset.

  4. Urea destabilizes RNA by forming stacking interactions and multiple hydrogen bonds with nucleic acid bases.

    PubMed

    Priyakumar, U Deva; Hyeon, Changbong; Thirumalai, D; Mackerell, Alexander D

    2009-12-16

    Urea titration of RNA by urea is an effective approach to investigate the forces stabilizing this biologically important molecule. We used all atom molecular dynamics simulations using two urea force fields and two RNA constructs to elucidate in atomic detail the destabilization mechanism of folded RNA in aqueous urea solutions. Urea denatures RNA by forming multiple hydrogen bonds with the RNA bases and has little influence on the phosphodiester backbone. Most significantly we discovered that urea engages in stacking interactions with the bases. We also estimate, for the first time, the m-value for RNA, which is a measure of the strength of urea-RNA interactions. Our work provides a conceptual understanding of the mechanism by which urea enhances RNA folding rates.

  5. Effect of stacking faults on the magnetocrystalline anisotropy of hcp Co-based nanowires

    NASA Astrophysics Data System (ADS)

    Kha, Tuan Mai; Schoenstein, Frédéric; Zighem, Fatih; Nowak, Sophie; Leridon, Brigitte; Jouini, Noureddine; Mercone, Silvana

    2017-01-01

    Replacing materials based on rare-earth elements in current permanent magnets is a real scientific, economic and environmental challenge. Ferromagnetic 3d transition metals seem an apt direction to go in this field, due to their high residual magnetization and thermal stability. In order to improve their coercive behavior, nanostructured magnets based on the assembly of high-aspect-ratio nanoparticles (i.e. cobalt based nanorods and nanowires) have recently been proposed. In these, the nanoparticle morphology itself drives the magnetization reversal mechanism. This purely geometrical effect seems to obscure the effects of structural defects, although it is clear that high magnetocrystalline energy is required to maintain a stable orientation of the magnetic moment inside the nanoparticles. We present here an experimental study whose aim is to distinguish the role of the stacking faults from the effects of shape and morphology on the magnetization reversal mechanism in cobalt-based nanowires. Coercive field results have been obtained on Co80Ni20 nanowires synthesized by a polyol process. Through accurate control of shape and morphology, it was possible to discard the effects of shape and thus to highlight the influence of crystal defects on the magnetism of Co80Ni20 nanowires. A micromagnetic study, consistent with the experimental analyses, is also presented. The results discussed in this work clearly show that even if the morphological characteristics are conducive to a high coercive field, the presence of numerous stacking faults has the opposite effect and leads to materials with a significantly lower coercive field than expected, which is not suitable for permanent magnet applications.

  6. A novel polytype - the stacking fault based γ-MoO3 nanobelts.

    PubMed

    Sławiński, Wojciech A; Fjellvåg, Øystein S; Ruud, Amund; Fjellvåg, Helmer

    2016-04-01

    γ-MoO3 nanobelts prepared by hydrothermal synthesis were studied by synchrotron radiation powder diffraction, scanning electron microscopy, transmission electron microscopy and selected area electron diffraction. Their nm dimensions, in particular in two crystallographic directions, have a profound influence on electrochemical properties during cycling as the cathode material in lithium-ion batteries (LIBs). The diffraction analysis shows clearly that the crystal structure for the γ-MoO3 nanobelts differs significantly from that of bulk α-MoO3. The observed powder diffraction pattern, with asymmetric peaks, extremely broad peaks, as well as additional or absent diffraction peaks, is fully described by means of a model based on stacking disorder of MoO3 slabs.

  7. Stretching single-stranded DNA: interplay of electrostatic, base-pairing, and base-pair stacking interactions.

    PubMed Central

    Zhang, Y; Zhou, H; Ou-Yang, Z C

    2001-01-01

    Recent single-macromolecule observations revealed that the force/extension characteristics of single-stranded DNA (ssDNA) are closely related to solution ionic concentration and DNA sequence composition. To understand this, we studied the elastic property of ssDNA through the Monte Carlo implementation of a modified freely jointed chain (FJC), with electrostatic, base-pairing, and base-pair stacking interactions all incorporated. The simulated force-extension profiles for both random and designed sequences have attained quantitative agreements with the experimental data. In low-salt solution, electrostatic interaction dominates, and at low forces, the molecule can be more easily aligned than an unmodified FJC. In high-salt solution, secondary hairpin structure appears in ssDNA by the formation of base pairs between complementary bases, and external stretching causes a hairpin-coil structural transition, which is continuous for ssDNA made of random sequences. In designed sequences such as poly(dA-dT) and poly(dG-dC), the stacking potential between base pairs encourages the aggregation of base pairs into bulk hairpins and makes the hairpin-coil transition a discontinuous (first-order) process. The sensitivity of elongation to the base-pairing rule is also investigated. The comparison of modeling calculations and the experimental data suggests that the base pairing of single-stranded polynucleotide molecules tends to form a nested and independent planar hairpin structure rather than a random intersecting pattern. PMID:11463654

  8. Raman spectroscopic measurement of base stacking in solutions of adenosine, AMP, ATP, and oligoadenylates.

    PubMed

    Weaver, J L; Williams, R W

    1988-12-13

    Measurements of the colligative properties of nucleosides and their derivatives have shown that bases form transient aggregates in solution [Ts'o (1967) J. Am. Chem. Soc. 89, 3612-3622]. Aggregation of nucleotides cannot be measured by osmometry due to the presence of counterions. Sedimentation measurements are difficult to obtain and have been complicated by differences in pH [Ferguson et al. (1974) Biophys. Chem. 1, 325-337]. Raman studies of oligonucleotides have shown that the intensities due to base vibrational modes depend on the extent of base stacking, but this dependence has not been quantitated. We have measured this dependence by relating changes in the Raman spectra of nucleotides and nucleosides with previous measurements of colligative properties. Visible Raman spectra of ATP, AMP, and adenosine, taken over a range of concentrations from 1 to 1000 mM, show that the peak intensity ratio (I1305 + I1380)/I1340 varies linearly with the log of the concentration for all three bases. This concentration-dependent change correlates with published molal osmotic coefficient data for functionally similar bases with a correlation coefficient of 0.99. In contrast, UV resonance Raman spectra of the same bases show changes that vary linearly with concentration.

  9. Differential Geometry Based Multiscale Models

    PubMed Central

    Wei, Guo-Wei

    2010-01-01

    Large chemical and biological systems such as fuel cells, ion channels, molecular motors, and viruses are of great importance to the scientific community and public health. Typically, these complex systems in conjunction with their aquatic environment pose a fabulous challenge to theoretical description, simulation, and prediction. In this work, we propose a differential geometry based multiscale paradigm to model complex macromolecular systems, and to put macroscopic and microscopic descriptions on an equal footing. In our approach, the differential geometry theory of surfaces and geometric measure theory are employed as a natural means to couple the macroscopic continuum mechanical description of the aquatic environment with the microscopic discrete atom-istic description of the macromolecule. Multiscale free energy functionals, or multiscale action functionals are constructed as a unified framework to derive the governing equations for the dynamics of different scales and different descriptions. Two types of aqueous macromolecular complexes, ones that are near equilibrium and others that are far from equilibrium, are considered in our formulations. We show that generalized Navier–Stokes equations for the fluid dynamics, generalized Poisson equations or generalized Poisson–Boltzmann equations for electrostatic interactions, and Newton's equation for the molecular dynamics can be derived by the least action principle. These equations are coupled through the continuum-discrete interface whose dynamics is governed by potential driven geometric flows. Comparison is given to classical descriptions of the fluid and electrostatic interactions without geometric flow based micro-macro interfaces. The detailed balance of forces is emphasized in the present work. We further extend the proposed multiscale paradigm to micro-macro analysis of electrohydrodynamics, electrophoresis, fuel cells, and ion channels. We derive generalized Poisson–Nernst–Planck equations that

  10. Differential geometry based multiscale models.

    PubMed

    Wei, Guo-Wei

    2010-08-01

    Large chemical and biological systems such as fuel cells, ion channels, molecular motors, and viruses are of great importance to the scientific community and public health. Typically, these complex systems in conjunction with their aquatic environment pose a fabulous challenge to theoretical description, simulation, and prediction. In this work, we propose a differential geometry based multiscale paradigm to model complex macromolecular systems, and to put macroscopic and microscopic descriptions on an equal footing. In our approach, the differential geometry theory of surfaces and geometric measure theory are employed as a natural means to couple the macroscopic continuum mechanical description of the aquatic environment with the microscopic discrete atomistic description of the macromolecule. Multiscale free energy functionals, or multiscale action functionals are constructed as a unified framework to derive the governing equations for the dynamics of different scales and different descriptions. Two types of aqueous macromolecular complexes, ones that are near equilibrium and others that are far from equilibrium, are considered in our formulations. We show that generalized Navier-Stokes equations for the fluid dynamics, generalized Poisson equations or generalized Poisson-Boltzmann equations for electrostatic interactions, and Newton's equation for the molecular dynamics can be derived by the least action principle. These equations are coupled through the continuum-discrete interface whose dynamics is governed by potential driven geometric flows. Comparison is given to classical descriptions of the fluid and electrostatic interactions without geometric flow based micro-macro interfaces. The detailed balance of forces is emphasized in the present work. We further extend the proposed multiscale paradigm to micro-macro analysis of electrohydrodynamics, electrophoresis, fuel cells, and ion channels. We derive generalized Poisson-Nernst-Planck equations that are

  11. Extended weak bonding interactions in DNA: pi-stacking (base-base), base-backbone, and backbone-backbone interactions.

    PubMed

    Matta, Chérif F; Castillo, Norberto; Boyd, Russell J

    2006-01-12

    We report on several weak interactions in nucleic acids, which, collectively, can make a nonnegligible contribution to the structure and stability of these molecules. Fragments of DNA were obtained from previously determined accurate experimental geometries and their electron density distributions calculated using density functional theory (DFT). The electron densities were analyzed topologically according to the quantum theory of atoms in molecules (AIM). A web of closed-shell bonding interactions is shown to connect neighboring base pairs in base-pair duplexes and in dinuleotide steps. This bonding underlies the well-known pi-stacking interaction between adjacent nucleic acid bases and is characterized topologically for the first time. Two less widely appreciated modes of weak closed-shell interactions in nucleic acids are also described: (i) interactions between atoms in the bases and atoms belonging to the backbone (base-backbone) and (ii) interactions among atoms within the backbone itself (backbone-backbone). These interactions include hydrogen bonding, dihydrogen bonding, hydrogen-hydrogen bonding, and several other weak closed-shell X-Y interactions (X, Y = O, N, C). While each individual interaction is very weak and typically accompanied by perhaps 0.5-3 kcal/mol, the sum total of these interactions is postulated to play a role in stabilizing the structure of nucleic acids. The Watson-and-Crick hydrogen bonding is also characterized in detail at the experimental geometries as a prelude to the discussion of the modes of interactions listed in the title.

  12. Impact of geometry optimization on base-base stacking interaction energies in the canonical A- and B-forms of DNA.

    PubMed

    McDonald, Ashley Ringer; Denning, Elizabeth J; MacKerell, Alexander D

    2013-02-21

    Base stacking is known to make an important contribution to the stability of DNA and RNA, and accordingly, significant efforts are ongoing to calculate stacking energies using ab initio quantum mechanical methods. To date, impressive improvements have been made in the model chemistries used to perform stacking energy calculations, including extensions that include robust treatments of electron correlation with extended basis sets, as required to treat interactions where dispersion makes a significant contribution. However, those efforts typically use rigid monomer geometries when calculating the interaction energies. To overcome this, in the present work, we describe a novel internal coordinate definition that allows the relative, intermolecular orientation of stacked base monomers to be constrained during geometry optimizations while allowing full optimization of the intramolecular degrees of freedom. Use of the novel reference frame to calculate the impact of full geometry optimization versus constraining the bases to be planar on base monomer stacking energies, combined with density-fitted, spin-component scaling MP2 treatment of electron correlation, shows that full optimization makes the average stacking energy more favorable by -3.4 and -1.5 kcal/mol for the canonical A and B conformations of the 16 5' to 3' base stacked monomers. Thus, treatment of geometry optimization impacts the stacking energies to an extent similar to or greater than the impact of current state of the art increases in the rigor of the model chemistry itself used to treat base stacking. Results also indicate that stacking favors the B-form of DNA, though the average difference versus the A-form decreases from -2.6 to -0.6 kcal/mol when the intramolecular geometry is allowed to fully relax. However, stacking involving cytosine is shown to favor the A-form of DNA, with that contribution generally larger in the fully optimized bases. The present results show the importance of allowing

  13. Synthetic Aperture Radar Target Recognition with Feature Fusion Based on a Stacked Autoencoder

    PubMed Central

    Kang, Miao; Ji, Kefeng; Leng, Xiangguang; Xing, Xiangwei; Zou, Huanxin

    2017-01-01

    Feature extraction is a crucial step for any automatic target recognition process, especially in the interpretation of synthetic aperture radar (SAR) imagery. In order to obtain distinctive features, this paper proposes a feature fusion algorithm for SAR target recognition based on a stacked autoencoder (SAE). The detailed procedure presented in this paper can be summarized as follows: firstly, 23 baseline features and Three-Patch Local Binary Pattern (TPLBP) features are extracted. These features can describe the global and local aspects of the image with less redundancy and more complementarity, providing richer information for feature fusion. Secondly, an effective feature fusion network is designed. Baseline and TPLBP features are cascaded and fed into a SAE. Then, with an unsupervised learning algorithm, the SAE is pre-trained by greedy layer-wise training method. Capable of feature expression, SAE makes the fused features more distinguishable. Finally, the model is fine-tuned by a softmax classifier and applied to the classification of targets. 10-class SAR targets based on Moving and Stationary Target Acquisition and Recognition (MSTAR) dataset got a classification accuracy up to 95.43%, which verifies the effectiveness of the presented algorithm. PMID:28117689

  14. Degradation behavior of Mg-based biomaterials containing different long-period stacking ordered phases

    PubMed Central

    Peng, Qiuming; Guo, Jianxin; Fu, Hui; Cai, Xuecheng; Wang, Yanan; Liu, Baozhong; Xu, Zhigang

    2014-01-01

    Long-period stacking ordered (LPSO) phases play an essential role in the development of magnesium alloys because they have a direct effect on mechanical and corrosion properties of the alloys. The LPSO structures are mostly divided to 18R and 14H. However, to date there are no consistent opinions about their degradation properties although both of them can improve mechanical properties. Herein we have successfully obtained two LPSO phases separately in the same Mg-Dy-Zn system and comparatively investigated the effect of different LPSO phases on degradation behavior in 0.9 wt.% NaCl solution. Our results demonstrate that a fine metastable 14H-LPSO phase in grain interior is more effective to improve corrosion resistance due to the presence of a homogeneous oxidation film and rapid film remediation ability. The outstanding corrosion resistant Mg-Dy-Zn based alloys with a metastable 14H-LPSO phase, coupled with low toxicity of alloying elements, are highly desirable in the design of novel Mg-based biomaterials, opening up a new avenue in the area of bio-Mg. PMID:24401851

  15. Synthetic Aperture Radar Target Recognition with Feature Fusion Based on a Stacked Autoencoder.

    PubMed

    Kang, Miao; Ji, Kefeng; Leng, Xiangguang; Xing, Xiangwei; Zou, Huanxin

    2017-01-20

    Feature extraction is a crucial step for any automatic target recognition process, especially in the interpretation of synthetic aperture radar (SAR) imagery. In order to obtain distinctive features, this paper proposes a feature fusion algorithm for SAR target recognition based on a stacked autoencoder (SAE). The detailed procedure presented in this paper can be summarized as follows: firstly, 23 baseline features and Three-Patch Local Binary Pattern (TPLBP) features are extracted. These features can describe the global and local aspects of the image with less redundancy and more complementarity, providing richer information for feature fusion. Secondly, an effective feature fusion network is designed. Baseline and TPLBP features are cascaded and fed into a SAE. Then, with an unsupervised learning algorithm, the SAE is pre-trained by greedy layer-wise training method. Capable of feature expression, SAE makes the fused features more distinguishable. Finally, the model is fine-tuned by a softmax classifier and applied to the classification of targets. 10-class SAR targets based on Moving and Stationary Target Acquisition and Recognition (MSTAR) dataset got a classification accuracy up to 95.43%, which verifies the effectiveness of the presented algorithm.

  16. Thin Co/Ni-based bottom pinned spin-transfer torque magnetic random access memory stacks with high annealing tolerance

    NASA Astrophysics Data System (ADS)

    Tomczak, Y.; Swerts, J.; Mertens, S.; Lin, T.; Couet, S.; Liu, E.; Sankaran, K.; Pourtois, G.; Kim, W.; Souriau, L.; Van Elshocht, S.; Kar, G.; Furnemont, A.

    2016-01-01

    Spin-transfer torque magnetic random access memory (STT-MRAM) is considered as a replacement for next generation embedded and stand-alone memory applications. One of the main challenges in the STT-MRAM stack development is the compatibility of the stack with CMOS process flows in which thermal budgets up to 400 °C are applied. In this letter, we report on a perpendicularly magnetized MgO-based tunnel junction (p-MTJ) on a thin Co/Ni perpendicular synthetic antiferromagnetic layer with high annealing tolerance. Tunnel magneto resistance (TMR) loss after annealing occurs when the reference layer loses its perpendicular magnetic anisotropy due to reduction of the CoFeB/MgO interfacial anisotropy. A stable Co/Ni based p-MTJ stack with TMR values of 130% at resistance-area products of 9 Ω μm2 after 400 °C anneal is achieved via moment control of the Co/Ta/CoFeB reference layer. Thinning of the CoFeB polarizing layer down to 0.8 nm is the key enabler to achieve 400 °C compatibility with limited TMR loss. Thinning the Co below 0.6 nm leads to a loss of the antiferromagnetic interlayer exchange coupling strength through Ru. Insight into the thickness and moment engineering of the reference layer is displayed to obtain the best magnetic properties and high thermal stability for thin Co/Ni SAF-based STT-MRAM stacks.

  17. Investigation of Ruthenium Dissolution in Advanced Membrane Electrode Assemblies for Direct Methanol Based Fuel Cell Stacks

    NASA Technical Reports Server (NTRS)

    Valdez, Thomas I.; Firdosy, S.; Koel, B. E.; Narayanan, S. R.

    2005-01-01

    Dissolution of ruthenium was observed in the 80-cell stack. Duration testing was performed in single cell MEAs to determine the pathway of cell degradation. EDAX analysis on each of the single cell MEAs has shown that the Johnson Matthey commercial catalyst is stable in DMFC operation for 250 hours, no ruthenium dissolution was observed. Changes in the hydrophobicity of the cathode backing papers was minimum. Electrode polarization analysis revealed that the MEA performance loss is attributed to changes in the cathode catalyst layer. Ruthenium migration does not seem to occur during cell operation but can occur when methanol is absent from the anode compartment, the cathode compartment has access to air, and the cells in the stack are electrically connected to a load (Shunt Currents). The open-to-air cathode stack design allowed for: a) The MEAs to have continual access to oxygen; and b) The stack to sustain shunt currents. Ruthenium dissolution in a DMFC stack can be prevented by: a) Developing an internally manifolded stacks that seal reactant compartments when not in operation; b) Bringing the cell voltages to zero quickly when not in operation; and c) Limiting the total number of cells to 25 in an effort to limit shunt currents.

  18. A hybrid microbial fuel cell stack based on single and double chamber microbial fuel cells for self-sustaining pH control

    NASA Astrophysics Data System (ADS)

    Yang, Wei; Li, Jun; Ye, Dingding; Zhang, Liang; Zhu, Xun; Liao, Qiang

    2016-02-01

    Proton accumulation in the anode chamber is the major problem that affects the operational stability and electricity generation performance of double chamber microbial fuel cells (MFCs). In this study, a hybrid microbial fuel cell stack (DS-DS stack) based on single (SCMFCs) and double chamber MFCs (DCMFCs) is proposed for self-sustaining pH control in the MFC stack. It is found that the aerobic microbial oxidation of acetate by the biofilm that is attached to the air cathode of SCMFCs is responsible for the self-sustaining removal of accumulated H+ in the effluent of DCMFCs. Compared with the stack that solely consists of SCMFCs (SS-SS stack) or DCMFCs (DD-DD stack), the hybrid stack exhibits the highest electricity output performance and the most effective conversion of acetate into electricity at high power levels. Furthermore, the hybrid stack demonstrates the operation time of 15.7 ± 1.1 h when the operating voltage is above 0.8 V. This value is much higher than that of the DD-DD (8.5 ± 2.4 h) and SS-SS (8.1 ± 1.4 h) stacks, which suggests that the hybrid stack had a good operational stability.

  19. Computational evaluation of intermolecular interactions of a universal base 3-nitropyrrole in stacked dimers and DNA duplexes.

    PubMed

    Seio, Kohji; Ukawa, Hisashi; Shohda, Koh-ichiro; Sekine, Mitsuo

    2005-06-01

    The stacking interactions between a universal base of 3-nitropyrrole (3NP) and four canonical nucleobases were studied by means of ab initio molecular orbital calculations. The stabilities of the complexes are comparable to those of the stacked dimers of canonical bases reported previously. The detailed analysis of the interaction energies revealed the importance of the dipole-dipole interaction included in the Hartree-Fock terms to determine the geometry dependence of the stacking energies. It was also clarified that the dispersion energies included in the electron-correlation terms were essential to obtain adequate stabilities. The contribution of the nitro group was evaluated by the comparative studies of pyrrole and 3NP. The increased molecular dipole moment and surface are expected to account for the enhancement of the stability of the stacked dimers containing 3NP. The force field parameters required for calculation of the molecular mechanics of 3NP were obtained for 3NP on the basis of these molecular orbital calculations. The energy-minimized structures obtained by the molecular mechanics calculations of 3NP accorded with those obtained by the molecular orbital calculations described above. A DNA duplex structure containing 3NP-A, 3NP-T, or 3NP-C was calculated by use of these force field parameters. In the case of 3NP-A, the computationally calculated structure was in good agreement with that previously determined by use of (1)H-NMR except for the orientation of the nitro group.

  20. A Three-Stage Inverter-Based Stacked Power Amplifier in 65 nm Complementary Metal Oxide Semiconductor Process

    NASA Astrophysics Data System (ADS)

    Kiumarsi, Hamid; Mizuochi, Yutaka; Ito, Hiroyuki; Ishihara, Noboru; Masu, Kazuya

    2012-02-01

    A three-stage inverter-based stacked power amplifier (PA) in complementary metal oxide semiconductor (CMOS) process is proposed to overcome low breakdown voltage problem of scaled CMOS technologies. Unlike previous reported stacked PAs which radio frequency choke (RFC) was inevitable, we proposed stacked nMOS and pMOS transistors which effectively eliminates use of RFC. By properly setting self-biased circuits' and transistors' parameters, output impedance could reach up to 50 Ω which together with not employing the RFC makes this topology very appealing for the scalable PA realization. As a proof of concept, a three-stage PA using 65 nm CMOS technology is implemented. With a 6 V power supply for the third stage, the fabricated PA shows a small-signal gain of 36 dB, a saturated output power of 16 dBm and a maximum power added efficiency of 10% at 1 GHz. Using a 7.5 V of power supply, saturated output power reaches 18 dBm. To the best of our knowledge, this is the first reported inverter-based stacked PA.

  1. An overview of the DII-HEP OpenStack based CMS data analysis

    NASA Astrophysics Data System (ADS)

    Osmani, L.; Tarkoma, S.; Eerola, P.; Komu, M.; Kortelainen, M. J.; Kraemer, O.; Lindén, T.; Toor, S.; White, J.

    2015-05-01

    An OpenStack based private cloud with the Cluster File System has been built and used with both CMS analysis and Monte Carlo simulation jobs in the Datacenter Indirection Infrastructure for Secure High Energy Physics (DII-HEP) project. On the cloud we run the ARC middleware that allows running CMS applications without changes on the job submission side. Our test results indicate that the adopted approach provides a scalable and resilient solution for managing resources without compromising on performance and high availability. To manage the virtual machines (VM) dynamically in an elastic fasion, we are testing the EMI authorization service (Argus) and the Execution Environment Service (Argus-EES). An OpenStackplugin has been developed for Argus-EES. The Host Identity Protocol (HIP) has been designed for mobile networks and it provides a secure method for IP multihoming. HIP separates the end-point identifier and locator role for IP address which increases the network availability for the applications. Our solution leverages HIP for traffic management. This presentation gives an update on the status of the work and our lessons learned in creating an OpenStackbased cloud for HEP.

  2. A stacking-fault based microscopic model for platelets in diamond

    NASA Astrophysics Data System (ADS)

    Antonelli, Alex; Nunes, Ricardo

    2005-03-01

    We propose a new microscopic model for the 001 planar defects in diamond commonly called platelets. This model is based on the formation of a metastable stacking fault, which can occur because of the ability of carbon to stabilize in different bonding configurations. In our model the core of the planar defect is basically a double layer of three-fold coordinated sp^2 carbon atoms embedded in the common sp^3 diamond structure. The properties of the model were determined using ab initio total energy calculations. All significant experimental signatures attributed to the platelets, namely, the lattice displacement along the [001] direction, the asymmetry between the [110] and the [11 0] directions, the infrared absorption peak B^' , and broad luminescence lines that indicate the introduction of levels in the band gap, are naturally accounted for in our model. The model is also very appealing from the point of view of kinetics, since naturally occurring shearing processes will lead to the formation of the metastable fault.Authors acknowledge financial support from the Brazilian agencies FAPESP, CNPq, FAEP-UNICAMP, FAPEMIG, and Instituto do Milênio em Nanociências-MCT

  3. Artificial neural network model of a short stack solid oxide fuel cell based on experimental data

    NASA Astrophysics Data System (ADS)

    Razbani, Omid; Assadi, Mohsen

    2014-01-01

    Solid oxide fuel cells (SOFCs) are complex systems in which electrical conduction, heat transfer, gas phase mass transport, chemical reactions and ionic conduction take place simultaneously and are tightly coupled. Mathematical models based on conservation laws have been shown to be slow and because of some parameter estimation for physical, chemical and electrochemical properties they have less accuracy. ANN models are powerful tools that bring simplicity and real-time response to SOFC modeling. Depending on the quality of the training data, ANN models can also show greater accuracy than CFD models. In this study ANN modeling of a short stack SOFC is considered. Training data are extracted and filtered from measurements on a dedicated test set-up. Given the fuel flow and composition, air flow, oven temperature and current, the model can predict the voltage and temperature profile of the cell. An optimized structure for the network is selected as: 5-11-6 for a 5 input, 6 output network with 11 hidden neurons. Prediction results of the ANN model deviate 0.2% concerning average relative error compared to the measurements.

  4. Grain Boundary Engineering of a Low Stacking Fault Energy Ni-based Superalloy

    NASA Astrophysics Data System (ADS)

    McCarley, Joshua; Helmink, Randolph; Goetz, Robert; Tin, Sammy

    2017-04-01

    The effects of thermo-mechanical processing parameters on the resulting microstructure of an experimental Nickel-based superalloy containing 24 wt pct Co were investigated. Hot compression tests were performed at temperatures ranging from 1293 K to 1373 K (1020 to 1100 °C) and strain rates ranging from 0.0005 to 0.1/s. The mechanically deformed samples were also subject to annealing treatments at sub-solvus 1388 K (1115 °C) and super-solvus 1413 K (1140 °C) temperatures. This investigation sought to quantify and subsequently understand the behavior and evolution of both the grain boundary structure and length fraction of Σ3 twin boundaries in the low stacking fault energy superalloy. Over the range of deformation parameters investigated, the corresponding deformation mechanism map revealed that dynamic recrystallization or dynamic recovery was dominant. These conditions largely promoted post-deformation grain refinement and the formation of annealing twins following annealing. Samples deformed at strain rates of 0.0005 and 0.001/s at 1333 K and 1373 K (1060 °C and 1100 °C) exhibited extensive grain boundary sliding/rotation associated with superplastic flow. Upon annealing, deformation conditions that resulted predominately in superplastic flow were found to provide negligible enhancement of twin boundaries and produced little to no post-deformation grain refinement.

  5. Grain Boundary Engineering of a Low Stacking Fault Energy Ni-based Superalloy

    NASA Astrophysics Data System (ADS)

    McCarley, Joshua; Helmink, Randolph; Goetz, Robert; Tin, Sammy

    2017-02-01

    The effects of thermo-mechanical processing parameters on the resulting microstructure of an experimental Nickel-based superalloy containing 24 wt pct Co were investigated. Hot compression tests were performed at temperatures ranging from 1293 K to 1373 K (1020 to 1100 °C) and strain rates ranging from 0.0005 to 0.1/s. The mechanically deformed samples were also subject to annealing treatments at sub-solvus 1388 K (1115 °C) and super-solvus 1413 K (1140 °C) temperatures. This investigation sought to quantify and subsequently understand the behavior and evolution of both the grain boundary structure and length fraction of Σ3 twin boundaries in the low stacking fault energy superalloy. Over the range of deformation parameters investigated, the corresponding deformation mechanism map revealed that dynamic recrystallization or dynamic recovery was dominant. These conditions largely promoted post-deformation grain refinement and the formation of annealing twins following annealing. Samples deformed at strain rates of 0.0005 and 0.001/s at 1333 K and 1373 K (1060 °C and 1100 °C) exhibited extensive grain boundary sliding/rotation associated with superplastic flow. Upon annealing, deformation conditions that resulted predominately in superplastic flow were found to provide negligible enhancement of twin boundaries and produced little to no post-deformation grain refinement.

  6. Nanofracture on fused silica microchannel for Donnan exclusion based electrokinetic stacking of biomolecules.

    PubMed

    Wu, Zhi-Yong; Li, Cui-Ye; Guo, Xiao-Li; Li, Bo; Zhang, Da-Wei; Xu, Ye; Fang, Fang

    2012-09-21

    Due to Donnan exclusion, charged molecules are prohibited from passing through a channel of electrical double layer scale (nanometers), even though the molecules are smaller than the lowest dimension of the channel. To employ this effect for on-chip pre-concentration, an ion channel of nanometer scale has to be introduced. Here we introduced a simple method of generating a fracture (11-250 nm) directly on the commercially available open tubular fused silica capillary, and a chip comprised of the capillary with the nanofracture was prepared. A ring-disk model of the fracture was derived with which the fracture width can be easily characterized online without any damage to the chip, and the result was validated by a scanning electron microscope (SEM). The fractures can be used directly as a nanofluidic interface exhibiting an obvious ion concentration polarization effect with high current flux. On-chip electrokinetic stacking of SYBR Green I labeled λDNA inside the capillary was successfully demonstrated, and a concentration factor close to the amplification rate of the polymerase chain reaction (PCR) was achieved within 7 min. The chip is inexpensive and easy to prepare in common chemistry and biochemistry laboratories without limitations in expensive microfabrication facilities and sophisticated expertise. More applications of this interface could be found for enhancing the detectability of capillary based microfluidic analytical systems for the analysis of low concentrated charged species.

  7. An automated local and regional seismic event location method based on waveform stacking

    NASA Astrophysics Data System (ADS)

    Grigoli, F.; Cesca, S.; Dahm, T.

    2013-12-01

    Seismic event location using automated procedures is a very important task in microseismic monitoring as well as within early warning applications. Increasingly large datasets recorded by dense network has recently favoured the development of different automated location methods. These methods are requested to be noise robust, since microseismic records are often characterized by a low signal-to-noise ratios. Most of the aforementioned standard automated location routines rely on automated phase picking and seismic phases identification (generally only P and S) and are generally based on the minimization of the residuals between the theoretical and observed arrival times of the main seismic phases. While different developed approaches allow to accurately pick P onsets, the automatic picking of the S onsets is still challenging, and posing a significant limit to the location performance. We present here a picking free location method based on the use of different characteristic functions, able to identify P and S phases. Both characteristic functions are based on the Short-Term-Average/Long-Term-Average (STA/LTA) traces. For P phases, we use as characteristic function the STA/LTA trace of the vertical energy function, whereas for the S phases we use the STA/LTA traces of a function obtained using the Principal Component Analysis (PCA) technique. In order to locate a seismic event, the space of possible locations is scanned and both P and S characteristic functions are stacked along travel time surfaces corresponding to the selected hypocenter. Iterating this procedure on a three-dimensional grid we retrieve a multidimensional matrix whose absolute maximum corresponds tot he coordinates of the seismic event. We show the performance of our method with different applications, at different scales: 1) s set of low magnitude events recorded by a local network in southern Italy and 2) a set of seismic events recorded by a regional seismic network in Turkey. This work has

  8. Efficiency of the MO method using a Slater-type basis set and non-local density functional formalism for describing DNA base stacking energy

    NASA Astrophysics Data System (ADS)

    Kurita, Noriyuki; Araki, Masahiro; Nakao, Kenji; Kobayashi, Kinya

    1999-11-01

    We have developed a molecular-orbital (MO) method based on a Slater-type basis set and non-local density functional theory (DFT) for describing the DNA base stacking properties, and its efficiency has been confirmed by investigating the stacking energy of cytosine dimer. Our DFT method can reproduce the dependence of stacking energy on the stacking conformation obtained by the ab initio second-order Møller-Plesset (MP2) calculation. The stable structures of hydrogen-bonded Watson-Crick base pairs and (PO 4H 2) -1 ion have been investigated and the structures obtained by our DFT method are comparable with those from the MP2 and DFT methods in Gaussian94. Therefore, our DFT method may be applicable for investigating the stable structures of more realistic models for stacked DNA base pairs including backbones.

  9. Universal Readers Based on Hydrogen Bonding or π-π Stacking for Identification of DNA Nucleotides in Electron Tunnel Junctions.

    PubMed

    Biswas, Sovan; Sen, Suman; Im, JongOne; Biswas, Sudipta; Krstic, Predrag; Ashcroft, Brian; Borges, Chad; Zhao, Yanan; Lindsay, Stuart; Zhang, Peiming

    2016-12-27

    A reader molecule, which recognizes all the naturally occurring nucleobases in an electron tunnel junction, is required for sequencing DNA by a recognition tunneling (RT) technique, referred to as a universal reader. In the present study, we have designed a series of heterocyclic carboxamides based on hydrogen bonding and a large-sized pyrene ring based on a π-π stacking interaction as universal reader candidates. Each of these compounds was synthesized to bear a thiolated linker for attachment to metal electrodes and examined for their interactions with naturally occurring DNA nucleosides and nucleotides by (1)H NMR, ESI-MS, computational calculations, and surface plasmon resonance. RT measurements were carried out in a scanning tunnel microscope. All of these molecules generated electrical signals with DNA nucleotides in tunneling junctions under physiological conditions (phosphate buffered aqueous solution, pH 7.4). Using a support vector machine as a tool for data analysis, we found that these candidates distinguished among naturally occurring DNA nucleotides with the accuracy of pyrene (by π-π stacking interactions) > azole carboxamides (by hydrogen-bonding interactions). In addition, the pyrene reader operated efficiently in a larger tunnel junction. However, the azole carboxamide could read abasic (AP) monophosphate, a product from spontaneous base hydrolysis or an intermediate of base excision repair. Thus, we envision that sequencing DNA using both π-π stacking and hydrogen-bonding-based universal readers in parallel should generate more comprehensive genome sequences than sequencing based on either reader molecule alone.

  10. Coordination Polymer Nanoglue: Robust Adhesion Based on Collective Lamellar Stacking of Nanoplates.

    PubMed

    Zhao, Yanyi; Li, Wenwu; Jiang, Xiangfen; Li, Fengqiong; Li, Xin; Zhang, Wei; Jiang, Ji-Sen; Liu, Jian; Ariga, Katsuhiko; Hu, Ming

    2017-03-15

    Despite a continuously growing interest in integration of coordination polymers (CPs) colloids towards functional materials, collective properties of the CPs colloids have rarely been addressed mainly due to the difficulty in assembling pure CPs colloids into superstructures with impressive mechanical strength. We demonstrated that CPs nanoplates could stack together spontaneously upon drying of the slurry of the nanoplates. The stacked CPs nanoplates could work like polymeric adhesives. Versatile articles could be glued when the CPs nanoplates were sandwiched between two substrates. In addition, the CPs nanoplates themselves could form well-defined bulk-structures without using any additional adhesives. The anisotropic shape together with the lamellar stacking way of the CPs nanoplates were found to be the key points in leading to the adhesion and cohesion effect. The reasonable adhesion strength of the CPs nanoglues can allow the exploration of further application of integrated CPs colloids in the future.

  11. Interface Optoelectronics Engineering for Mechanically Stacked Tandem Solar Cells Based on Perovskite and Silicon.

    PubMed

    Kanda, Hiroyuki; Uzum, Abdullah; Nishino, Hitoshi; Umeyama, Tomokazu; Imahori, Hiroshi; Ishikawa, Yasuaki; Uraoka, Yukiharu; Ito, Seigo

    2016-12-14

    Engineering of photonics for antireflection and electronics for extraction of the hole using 2.5 nm of a thin Au layer have been performed for two- and four-terminal tandem solar cells using CH3NH3PbI3 perovskite (top cell) and p-type single crystal silicon (c-Si) (bottom cell) by mechanically stacking. Highly transparent connection multilayers of evaporated-Au and sputtered-ITO films were fabricated at the interface to be a point-contact tunneling junction between the rough perovskite and flat silicon solar cells. The mechanically stacked tandem solar cell with an optimized tunneling junction structure was ⟨perovskite for the top cell/Au (2.5 nm)/ITO (154 nm) stacked-on ITO (108 nm)/c-Si for the bottom cell⟩. It was confirmed the best efficiency of 13.7% and 14.4% as two- and four-terminal devices, respectively.

  12. Analysis of radionuclide concentration in air released through the stack of a radiopharmaceutical production facility based on a medical cyclotron

    NASA Astrophysics Data System (ADS)

    Giardina, M.; Tomarchio, E.; Greco, D.

    2015-11-01

    Positron emitting radionuclides are increasingly used in medical diagnostics and the number of radiopharmaceutical production facilities have been estimated to be growing worldwide. During the process of production and/or patient administration of radiopharmaceuticals, an amount of these radionuclides might become airborne and escape into the environment. Therefore, the analysis of radionuclide concentration in the air released to the stack is a very important issue to evaluate the dose to the population living around the plant. To this end, sampling and measurement of radionuclide concentration in air released through the stack of a Nuclear Medicine Center (NMC), provided with a cyclotron for radiopharmaceuticals production, must be routinely carried out with an automatic measurement system. In this work is presented the air monitoring system realized at "San Gaetano" NMC at Bagheria (Italy) besides the analysis of the recorded stack relesead air concentration data. Sampling of air was carried out continuously and gamma-ray spectrometric measurement are made on-line and for a short time by using a shielded Marinelli beaker filled with sampled air and a gamma detector. The use of this system allows to have 1440 values of air concentration per day from 2002, year of the start of operation with the cyclotron. Therefore, the concentration values are very many and an analysis software is needed to determine the dose to the population. A comparison with the results of a simulation code based on a Gaussian Plume air dispersion modelling allow us to confirm the no-radiological significance of the stack effluent releases in terms of dose to population and to evaluate possible improvements in the plant devices to reduce the air concentration at stack.

  13. The feasibility of microseismic source characterization based on waveform stacking, traveltime tomography and time reversal imaging

    NASA Astrophysics Data System (ADS)

    Huang, J.; Reyes-Montes, J.; Young, R.

    2013-12-01

    The characterization of microseismic (MS) sources provides valuable information on fracture propagation during engineering operations such as hydraulic fracturing in reservoir development, mine excavations, and extraction of geothermal resources. The general approach requires the evaluation of the seismic moment tensor components. We present a feasibility study for the evaluation of MS source mechanisms using a comprehensive workflow including event location using grid-search based waveform stacking, velocity updating from passive traveltime tomography, and moment tensor evaluation based on time reversal imaging. The workflow is designed to minimize the bias introduced to the moment tensor from the errors in hypocenter and velocity model. Specifically, the first step is to calculate a traveltime table for both P- and S-wave direct arrivals. The Eikonal equation solver is based on a finite difference scheme named Fast Sweeping Method (FSM). The grid search is later applied to the continuous data streams for all trial origin time and hypocenter locations. The semblance is used to quantify the match between the traveltime table and the waveform. The grid point that minimises the residual is considered as the source location. If a large number of microseismic events are recovered, passive traveltime tomography can be performed to simultaneously relocate the events and update the velocity model illuminated by the microseismicity. As a result, the discrepancy between the observed and the calculated traveltime is decreased and the bias in the following moment tensor evaluation due to the errors from hypocenter locations and velocity models is reduced. In the last step, instead of iterative inversion we employed a time reversal operation that back propagates the time-reversed three-component full waveform signal into the tomographic velocity model. The strain tensor recorded at the hypocenter location as a function of time is considered as the moment tensor that initially

  14. Stacking Up

    ERIC Educational Resources Information Center

    Naylor, Jim

    2005-01-01

    Chimneys and stacks appear to be strong and indestructible, but chimneys begin to deteriorate from the moment they are built. Early on, no signs are apparent; but deterioration accelerates in subsequent years, and major repairs are soon needed instead of minor maintenance. With proper attention, most structures can be repaired and continue to…

  15. Molecular mechanism of direct proflavine-DNA intercalation: evidence for drug-induced minimum base-stacking penalty pathway.

    PubMed

    Sasikala, Wilbee D; Mukherjee, Arnab

    2012-10-11

    DNA intercalation, a biophysical process of enormous clinical significance, has surprisingly eluded molecular understanding for several decades. With appropriate configurational restraint (to prevent dissociation) in all-atom metadynamics simulations, we capture the free energy surface of direct intercalation from minor groove-bound state for the first time using an anticancer agent proflavine. Mechanism along the minimum free energy path reveals that intercalation happens through a minimum base stacking penalty pathway where nonstacking parameters (Twist→Slide/Shift) change first, followed by base stacking parameters (Buckle/Roll→Rise). This mechanism defies the natural fluctuation hypothesis and provides molecular evidence for the drug-induced cavity formation hypothesis. The thermodynamic origin of the barrier is found to be a combination of entropy and desolvation energy.

  16. Isotropic rotation in amphidynamic crystals of stacked carbazole-based rotors featuring halogen-bonded stators.

    PubMed

    Colin-Molina, Abraham; Pérez-Estrada, Salvador; Roa, Arian E; Villagrana-Garcia, Alvin; Hernández-Ortega, Simón; Rodríguez, Mario; Brown, Stuart E; Rodríguez-Molina, Braulio

    2016-10-25

    Liquid-like dynamics of a covalent 1,4-phenylene rotator have been unveiled in 1 with a brominated stator showing type-II halogen bonds. This singular rotation is favored by synergistic molecular changes in stacked molecules, according to VT solid state NMR, (1)H T1 relaxometry and VT X-ray experiments of this highly crystalline compound.

  17. Pressurized electrolysis stack with thermal expansion capability

    DOEpatents

    Bourgeois, Richard Scott

    2015-07-14

    The present techniques provide systems and methods for mounting an electrolyzer stack in an outer shell so as to allow for differential thermal expansion of the electrolyzer stack and shell. Generally, an electrolyzer stack may be formed from a material with a high coefficient of thermal expansion, while the shell may be formed from a material having a lower coefficient of thermal expansion. The differences between the coefficients of thermal expansion may lead to damage to the electrolyzer stack as the shell may restrain the thermal expansion of the electrolyzer stack. To allow for the differences in thermal expansion, the electrolyzer stack may be mounted within the shell leaving a space between the electrolyzer stack and shell. The space between the electrolyzer stack and the shell may be filled with a non-conductive fluid to further equalize pressure inside and outside of the electrolyzer stack.

  18. Thin Co/Ni-based bottom pinned spin-transfer torque magnetic random access memory stacks with high annealing tolerance

    SciTech Connect

    Tomczak, Y.; Swerts, J.; Mertens, S.; Lin, T.; Couet, S.; Sankaran, K.; Pourtois, G.; Kim, W.; Souriau, L.; Van Elshocht, S.; Kar, G.; Furnemont, A.; Liu, E.

    2016-01-25

    Spin-transfer torque magnetic random access memory (STT-MRAM) is considered as a replacement for next generation embedded and stand-alone memory applications. One of the main challenges in the STT-MRAM stack development is the compatibility of the stack with CMOS process flows in which thermal budgets up to 400 °C are applied. In this letter, we report on a perpendicularly magnetized MgO-based tunnel junction (p-MTJ) on a thin Co/Ni perpendicular synthetic antiferromagnetic layer with high annealing tolerance. Tunnel magneto resistance (TMR) loss after annealing occurs when the reference layer loses its perpendicular magnetic anisotropy due to reduction of the CoFeB/MgO interfacial anisotropy. A stable Co/Ni based p-MTJ stack with TMR values of 130% at resistance-area products of 9 Ω μm{sup 2} after 400 °C anneal is achieved via moment control of the Co/Ta/CoFeB reference layer. Thinning of the CoFeB polarizing layer down to 0.8 nm is the key enabler to achieve 400 °C compatibility with limited TMR loss. Thinning the Co below 0.6 nm leads to a loss of the antiferromagnetic interlayer exchange coupling strength through Ru. Insight into the thickness and moment engineering of the reference layer is displayed to obtain the best magnetic properties and high thermal stability for thin Co/Ni SAF-based STT-MRAM stacks.

  19. Reliable gate stack and substrate parameter extraction based on C-V measurements for 14 nm node FDSOI technology

    NASA Astrophysics Data System (ADS)

    Mohamad, B.; Leroux, C.; Rideau, D.; Haond, M.; Reimbold, G.; Ghibaudo, G.

    2017-02-01

    Effective work function and equivalent oxide thickness are fundamental parameters for technology optimization. In this work, a comprehensive study is done on a large set of FDSOI devices. The extraction of the gate stack parameters is carried out by fitting experimental CV characteristics to quantum simulation, based on self-consistent solution of one dimensional Poisson and Schrodinger equations. A reliable methodology for gate stack parameters is proposed and validated. This study identifies the process modules that impact directly the effective work function from those that only affect the device threshold voltage, due to the device architecture. Moreover, the relative impacts of various process modules on channel thickness and gate oxide thickness are evidenced.

  20. Three-dimensional conductive networks based on stacked SiO2@graphene frameworks for enhanced gas sensing.

    PubMed

    Huang, Da; Yang, Zhi; Li, Xiaolin; Zhang, Liling; Hu, Jing; Su, Yanjie; Hu, Nantao; Yin, Guilin; He, Dannong; Zhang, Yafei

    2017-01-07

    Graphene is an ideal candidate for gas sensing due to its excellent conductivity and large specific surface areas. However, it usually suffers from sheet stacking, which seriously debilitates its sensing performance. Herein, we demonstrate a three-dimensional conductive network based on stacked SiO2@graphene core-shell hybrid frameworks for enhanced gas sensing. SiO2 spheres are uniformly encapsulated by graphene oxide (GO) through an electrostatic self-assembly approach to form SiO2@GO core-shell hybrid frameworks, which are reduced through thermal annealing to establish three-dimensional (3D) conductive sensing networks. The SiO2 supported 3D conductive graphene frameworks reveal superior sensing performance to bare reduced graphene oxide (RGO) films, which can be attributed to their less agglomeration and larger surface area. The response value of the 3D framework based sensor for 50 ppm NH3 and 50 ppm NO2 increased 8 times and 5 times, respectively. Additionally, the sensing performance degradation caused by the stacking of the sensing materials is significantly suppressed because the graphene layers are separated by the SiO2 spheres. The sensing performance decays by 92% for the bare RGO films when the concentration of the sensing material increases 8 times, while there is only a decay of 25% for that of the SiO2@graphene core-shell hybrid frameworks. This work provides an insight into 3D frameworks of hybrid materials for effectively improving gas sensing performance.

  1. MNOS stack for reliable, low optical loss, Cu based CMOS plasmonic devices.

    PubMed

    Emboras, Alexandros; Najar, Adel; Nambiar, Siddharth; Grosse, Philippe; Augendre, Emmanuel; Leroux, Charles; de Salvo, Barbara; de Lamaestre, Roch Espiau

    2012-06-18

    We study the electro optical properties of a Metal-Nitride-Oxide-Silicon (MNOS) stack for a use in CMOS compatible plasmonic active devices. We show that the insertion of an ultrathin stoichiometric Si(3)N(4) layer in a MOS stack lead to an increase in the electrical reliability of a copper gate MNOS capacitance from 50 to 95% thanks to a diffusion barrier effect, while preserving the low optical losses brought by the use of copper as the plasmon supporting metal. An experimental investigation is undertaken at a wafer scale using some CMOS standard processes of the LETI foundry. Optical transmission measurments conducted in a MNOS channel waveguide configuration coupled to standard silicon photonics circuitry confirms the very low optical losses (0.39 dB.μm(-1)), in good agreement with predictions using ellipsometric optical constants of Cu.

  2. Increased Multilayer Fabrication and RF Characterization of a High-Density Stacked MIM Capacitor Based on Selective Etching

    SciTech Connect

    Tseng, VFG; Xie, HK

    2014-07-01

    This paper presents the fabrication and characterization of a high-density multilayer stacked metal-insulator-metal (MIM) capacitor based on a novel process of depositing the MIM multilayer on pillars followed by polishing and selective etching steps to form a stacked capacitor with merely three photolithography steps. In this paper, the pillars were made of glass to prevent substrate loss, whereas an oxide-nitride-oxide dielectric was employed for lower leakage, better voltage/frequency linearity, and better stress compensation. MIM capacitors with six dielectric layers were successfully fabricated, yielding capacitance density of 3.8 fF/mu m(2), maximum capacitance of 2.47 nF, and linear and quadratic voltage coefficients of capacitance below 21.2 ppm/V and 2.31 ppm/V-2. The impedance was measured from 40 Hz to 3 GHz, and characterized by an analytically derived equivalent circuit model to verify the radio frequency applicability. The multilayer stacking-induced plate resistance mismatch and its effect on the equivalent series resistance (ESR) and effective capacitance was also investigated, which can be counteracted by a corrected metal thickness design. A low ESR of 800 m Omega was achieved, whereas the self-resonance frequency was >760 MHz, successfully demonstrating the feasibility of this method to scale up capacitance densities for high-quality-factor, high-frequency, and large-value MIM capacitors.

  3. Comparative study on sample stacking by moving reaction boundary formed with weak acid and weak or strong base in capillary electrophoresis: II. Experiments.

    PubMed

    Zhang, Wei; Fan, Liuyin; Shao, Jing; Li, Si; Li, Shan; Cao, Chengxi

    2011-04-15

    To demonstrate the theoretic method on the stacking of zwitterion with moving reaction boundary (MRB) in the accompanying paper, the relevant experiments were performed. The experimental results quantitatively show that (1) MRB velocity, including the comparisons between MRB and zwitterionic velocities, possesses key importance to the design of MRB stacking; (2) a much long front alkaline plug without sample should be injected before the sample injection for a complete stacking of zwitterion if sample buffer is prepared with strong base, conversely no such plug is needed if using a weak base as the sample buffer with proper concentration and pH value; (3) the presence of salt in MRB system holds dramatic effect on the MRB stacking if sample solution is a strong base, but has no effect if a weak alkali is used as sample solution; (4) all of the experiments of this paper, including the previous work, quantitatively manifest the theory and predictions shown in the accompanying paper. In addition, the so-called derivative MRB-induced re-stacking and transient FASI-induced re-stacking were also observed during the experiments, and the relevant mechanisms were briefly demonstrated with the results. The theory and its calculation procedures developed in the accompanying paper can be well used for the predictions to the MRB stacking of zwitterion in CE.

  4. Fast concurrent array-based stacks, queues and deques using fetch-and-increment-bounded, fetch-and-decrement-bounded and store-on-twin synchronization primitives

    DOEpatents

    Chen, Dong; Gara, Alana; Heidelberger, Philip; Kumar, Sameer; Ohmacht, Martin; Steinmacher-Burow, Burkhard; Wisniewski, Robert

    2014-09-16

    Implementation primitives for concurrent array-based stacks, queues, double-ended queues (deques) and wrapped deques are provided. In one aspect, each element of the stack, queue, deque or wrapped deque data structure has its own ticket lock, allowing multiple threads to concurrently use multiple elements of the data structure and thus achieving high performance. In another aspect, new synchronization primitives FetchAndIncrementBounded (Counter, Bound) and FetchAndDecrementBounded (Counter, Bound) are implemented. These primitives can be implemented in hardware and thus promise a very fast throughput for queues, stacks and double-ended queues.

  5. Evaluation of single and stack membraneless enzymatic fuel cells based on ethanol in simulated body fluids.

    PubMed

    Galindo-de-la-Rosa, J; Arjona, N; Moreno-Zuria, A; Ortiz-Ortega, E; Guerra-Balcázar, M; Ledesma-García, J; Arriaga, L G

    2017-06-15

    The purpose of this work is to evaluate single and double-cell membraneless microfluidic fuel cells (MMFCs) that operate in the presence of simulated body fluids SBF, human serum and blood enriched with ethanol as fuels. The study was performed using the alcohol dehydrogenase enzyme immobilised by covalent binding through an array composed of carbon Toray paper as support and a layer of poly(methylene blue)/tetrabutylammonium bromide/Nafion and glutaraldehyde (3D bioanode electrode). The single MMFC was tested in a hybrid microfluidic fuel cell using Pt/C as the cathode. A cell voltage of 1.035V and power density of 3.154mWcm(-2) were observed, which is the highest performance reported to date. The stability and durability were tested through chronoamperometry and polarisation/performance curves obtained at different days, which demonstrated a slow decrease in the power density on day 10 (14%) and day 20 (26%). Additionally, the cell was tested for ethanol oxidation in simulated body fluid (SBF) with ionic composition similar to human blood plasma. Those tests resulted in 0.93V of cell voltage and a power density close to 1.237mWcm(-2). The double cell MMFC (Stack) was tested using serum and human blood enriched with ethanol. The stack operated with blood in a serial connection showed an excellent cell performance (0.716mWcm(-2)), demonstrating the feasibility of employing human blood as energy source.

  6. Long-term testing of a high-temperature proton exchange membrane fuel cell short stack operated with improved polybenzimidazole-based composite membranes

    NASA Astrophysics Data System (ADS)

    Pinar, F. Javier; Cañizares, Pablo; Rodrigo, Manuel A.; Úbeda, Diego; Lobato, Justo

    2015-01-01

    In this work, the feasibility of a 150 cm2 high-temperature proton exchange membrane fuel cell (HT-PEMFC) stack operated with modified proton exchange membranes is demonstrated. The short fuel cell stack was manufactured using a total of three 50 cm2 membrane electrode assemblies (MEAs). The PEM technology is based on a polybenzimidazole (PBI) membrane. The obtained results were compared with those obtained using a HT-PEMFC stack with unmodified membranes. The membranes were cast from a PBI polymer synthesized in the laboratory, and the modified membranes contained 2 wt.% micro-sized TiO2 as a filler. Long-term tests were performed in both constant and dynamic loading modes. The fuel cell stack with 2 wt.% TiO2 composite PBI membranes exhibited an irreversible voltage loss of less than 2% after 1100 h of operation. In addition, the acid loss was reduced from 2% for the fuel cell stack with unmodified membranes to 0.6% for the fuel cell stack with modified membranes. The results demonstrate that introducing filler into the membranes enhances the durability and stability of this type of fuel cell technology. Moreover, the fuel cell stack system also exhibits very rapid and stable power and voltage output responses under dynamic load regimes.

  7. Ultrasensitive detection of bacteria by microchip electrophoresis based on multiple-concentration approaches combining chitosan sweeping, field-amplified sample stacking, and reversed-field stacking.

    PubMed

    Wang, Zhi-Fang; Cheng, Shuang; Ge, Shu-Li; Wang, Huan; Wang, Qing-Jiang; He, Pin-Gang; Fang, Yu-Zhi

    2012-02-07

    In this paper we describe an on-chip multiple-concentration method combining chitosan (CS) sweeping, reversed-field stacking, and field-amplified sample stacking for highly efficient detection of bacteria. Escherichia coli was selected as a model bacterium to investigate the efficiency of this multiple-concentration method. CS was the most suitable sweeping agent for microchip electrophoresis, replacing the usually used cetyltrimethylammonium bromide for capillary electrophoresis. The additive taurine had a synergistic effect by enhancing the interaction between CS and the surface of the bacteria, thus improving the analysis sensitivity. All steps of the concentration method and related mechanisms are described and discussed in detail. A concentration enhancement factor of approximately 6000 was obtained using this concentration method under optimal conditions as compared to using no concentration step, and the detection limit of E. coli was 145 CFU/mL. The multiple-concentration methodology was also applied for the quantification of bacteria in surface water, and satisfactory results were achieved. The application of this methodology showed that the concentration enhancement of bacteria clearly conferred advantageous sensitivity, speed, and sample volume compared to established methods.

  8. Multi-kW high-brightness fiber coupled diode laser based on two dimensional stacked tailored diode bars

    NASA Astrophysics Data System (ADS)

    Bayer, Andreas; Unger, Andreas; Köhler, Bernd; Küster, Matthias; Dürsch, Sascha; Kissel, Heiko; Irwin, David A.; Bodem, Christian; Plappert, Nora; Kersten, Maik; Biesenbach, Jens

    2016-03-01

    The demand for high brightness fiber coupled diode laser devices in the multi kW power region is mainly driven by industrial applications for materials processing, like brazing, cladding and metal welding, which require a beam quality better than 30 mm x mrad and power levels above 3kW. Reliability, modularity, and cost effectiveness are key factors for success in the market. We have developed a scalable and modular diode laser architecture that fulfills these requirements through use of a simple beam shaping concept based on two dimensional stacking of tailored diode bars mounted on specially designed, tap water cooled heat sinks. The base element of the concept is a tailored diode laser bar with an epitaxial and lateral structure designed such that the desired beam quality in slow-axis direction can be realized without using sophisticated beam shaping optics. The optical design concept is based on fast-axis collimator (FAC) and slow-axis collimator (SAC) lenses followed by only one additional focusing optic for efficient coupling into a 400 μm fiber with a numerical aperture (NA) of 0.12. To fulfill the requirements of scalability and modularity, four tailored bars are populated on a reduced size, tap water cooled heat sink. The diodes on these building blocks are collimated simply via FAC and SAC. The building blocks can be stacked vertically resulting in a two-dimensional diode stack, which enables a compact design of the laser source with minimum beam path length. For a single wavelength, up to eight of these building blocks, implying a total of 32 tailored bars, can be stacked into a submodule, polarization multiplexed, and coupled into a 400 μm, 0.12NA fiber. Scalability into the multi kW region is realized by wavelength combining of replaceable submodules in the spectral range from 900 - 1100 nm. We present results of a laser source based on this architecture with an output power of more than 4 kW and a beam quality of 25 mm x mrad.

  9. A scalable infrastructure for CMS data analysis based on OpenStack Cloud and Gluster file system

    NASA Astrophysics Data System (ADS)

    Toor, S.; Osmani, L.; Eerola, P.; Kraemer, O.; Lindén, T.; Tarkoma, S.; White, J.

    2014-06-01

    The challenge of providing a resilient and scalable computational and data management solution for massive scale research environments requires continuous exploration of new technologies and techniques. In this project the aim has been to design a scalable and resilient infrastructure for CERN HEP data analysis. The infrastructure is based on OpenStack components for structuring a private Cloud with the Gluster File System. We integrate the state-of-the-art Cloud technologies with the traditional Grid middleware infrastructure. Our test results show that the adopted approach provides a scalable and resilient solution for managing resources without compromising on performance and high availability.

  10. Effects of alloying element and temperature on the stacking fault energies of dilute Ni-base superalloys.

    PubMed

    Shang, S L; Zacherl, C L; Fang, H Z; Wang, Y; Du, Y; Liu, Z K

    2012-12-19

    A systematic study of stacking fault energy (γ(SF)) resulting from induced alias shear deformation has been performed by means of first-principles calculations for dilute Ni-base superalloys (Ni(23)X and Ni(71)X) for various alloying elements (X) as a function of temperature. Twenty-six alloying elements are considered, i.e., Al, Co, Cr, Cu, Fe, Hf, Ir, Mn, Mo, Nb, Os, Pd, Pt, Re, Rh, Ru, Sc, Si, Ta, Tc, Ti, V, W, Y, Zn, and Zr. The temperature dependence of γ(SF) is computed using the proposed quasistatic approach based on a predicted γ(SF)-volume-temperature relationship. Besides γ(SF), equilibrium volume and the normalized stacking fault energy (Γ(SF) = γ(SF)/Gb, with G the shear modulus and b the Burgers vector) are also studied as a function of temperature for the 26 alloying elements. The following conclusions are obtained: all alloying elements X studied herein decrease the γ(SF) of fcc Ni, approximately the further the alloying element X is from Ni on the periodic table, the larger the decrease of γ(SF) for the dilute Ni-X alloy, and roughly the γ(SF) of Ni-X decreases with increasing equilibrium volume. In addition, the values of γ(SF) for all Ni-X systems decrease with increasing temperature (except for Ni-Cr at higher Cr content), and the largest decrease is observed for pure Ni. Similar to the case of the shear modulus, the variation of γ(SF) for Ni-X systems due to various alloying elements is traceable from the distribution of (magnetization) charge density: the spherical distribution of charge density around a Ni atom, especially a smaller sphere, results in a lower value of γ(SF) due to the facility of redistribution of charges. Computed stacking fault energies and the related properties are in favorable accord with available experimental and theoretical data.

  11. On-channel base stacking in microchip capillary gel electrophoresis for high-sensitivity DNA fragment analysis.

    PubMed

    Kim, Dae-Kwang; Kang, Seong Ho

    2005-01-28

    We evaluated a novel strategy for high-sensitivity DNA fragment analysis in a conventional glass double-T microfluidic chip. The microchip allows for a DNA on-channel concentration based on base stacking (BS) with a microchip capillary gel electrophoretic (MCGE) separation step in a poly(vinylpyrrolidone) (PVP) sieving matrix. Depending if low conductivity caused a neutralization reaction between the hydroxide ions and the run buffer component Tris+, the stacking of DNA fragments were processed in the microchip. Compared to a conventional MCGE separation with a normal electrokinetic injection, the peak heights of 50-2650-base pair (bp) DNA fragments on the MCGE-BS separation were increased 3.9-8.0-fold. When we applied the MCGE-BS method to the analysis of a clinical sample of bovine theileria after PCR reaction, the peak height intensity of the amplified 816-bp DNA fragment from the 18S rRNA of T. buffeli was enhanced 7.0-fold compared to that of the normal injection method.

  12. Switchable adhesion for wafer-handling based on dielectric elastomer stack transducers

    NASA Astrophysics Data System (ADS)

    Grotepaß, T.; Butz, J.; Förster-Zügel, F.; Schlaak, H. F.

    2016-04-01

    Vacuum grippers are often used for the handling of wafers and small devices. In order to evacuate the gripper, a gas flow is created that can harm the micro structures on the wafer. A promising alternative to vacuum grippers could be adhesive grippers with switchable adhesion. There have been some publications of gecko-inspired adhesive devices. Most of these former works consist of a structured surface which adheres to the object manipulated and an actuator for switching the adhesion. Until now different actuator principles have been investigated, like smart memory alloys and pneumatics. In this work for the first time dielectric elastomer stack transducers (DEST) are combined with a structured surface. DESTs are a promising new transducer technology with many applications in different industry sectors like medical devices, human-machine-interaction and soft robotics. Stacked dielectric elastomer transducers show thickness contraction originating from the electromechanical pressure of two compliant electrodes compressing an elastomeric dielectric when a voltage is applied. Since DESTs and the adhesive surfaces previously described are made of elastomers, it is self-evident to combine both systems in one device. The DESTs are fabricated by a spin coating process. If the flat surface of the spinning carrier is substituted for example by a perforated one, the structured elastomer surface and the DEST can be fabricated in one process. By electrical actuation the DEST contracts and laterally expands which causes the gecko-like cilia to adhere on the object to manipulate. This work describes the assembly and the experimental results of such a device using switchable adhesion. It is intended to be used for the handling of glass wafers.

  13. The Direct FuelCell™ stack engineering

    NASA Astrophysics Data System (ADS)

    Doyon, J.; Farooque, M.; Maru, H.

    FuelCell Energy (FCE) has developed power plants in the size range of 300 kW to 3 MW for distributed power generation. Field-testing of the sub-megawatt plants is underway. The FCE power plants are based on its Direct FuelCell™ (DFC) technology. This is so named because of its ability to generate electricity directly from a hydrocarbon fuel, such as natural gas, by reforming it inside the fuel cell stack itself. All FCE products use identical 8000 cm 2 cell design, approximately 350-400 cells per stack, external gas manifolds, and similar stack compression systems. The difference lies in the packaging of the stacks inside the stack module. The sub-megawatt system stack module contains a single horizontal stack whereas the MW-class stack module houses four identical vertical stacks. The commonality of the design, internal reforming features, and atmospheric operation simplify the system design, reduce cost, improve efficiency, increase reliability and maintainability. The product building-block stack design has been advanced through three full-size stack operations at company's headquarters in Danbury, CT. The initial proof-of-concept of the full-size stack design was verified in 1999, followed by a 1.5 year of endurance verification in 2000-2001, and currently a value-engineered stack version is in operation. This paper discusses the design features, important engineering solutions implemented, and test results of FCE's full-size DFC stacks.

  14. Oxygen migration in TiO{sub 2}-based higher-k gate stacks

    SciTech Connect

    Kim, Sang Bum; Brown, Stephen L.; Rossnagel, Stephen M.; Bruley, John; Copel, Matthew; Hopstaken, Marco J. P.; Narayanan, Vijay; Frank, Martin M.

    2010-03-15

    We report on the stability of high-permittivity (high-k) TiO{sub 2} films incorporated in metal-oxide-silicon capacitor structures with a TiN metal gate electrode, focusing on oxygen migration. Titanium oxide films are deposited by either Ti sputtering [physical vapor deposition (PVD)] followed by radical shower oxidation or by plasma-enhanced atomic layer deposition (PEALD) from titanium isopropoxide (Ti{l_brace}OCH(CH{sub 3}){sub 2{r_brace}4}) and O{sub 2} plasma. Both PVD and PEALD films result in near-stoichiometric TiO{sub 2} prior to high-temperature annealing. We find that dopant activation anneals of TiO{sub 2}-containing gate stacks at 1000 deg. C cause 5 A or more of additional SiO{sub 2} to be formed at the gate-dielectric/Si-channel interface. Furthermore, we demonstrate for the first time that oxygen released from TiO{sub 2} diffuses through the TiN gate electrode and oxidizes the poly-Si contact. The thickness of this upper SiO{sub 2} layer continues to increase with increasing TiO{sub 2} thickness, while the thickness of the regrown SiO{sub 2} at the gate-dielectric/Si interface saturates. The upper SiO{sub 2} layer degrades gate stack capacitance, and simultaneously the oxygen-deficient TiO{sub x} becomes a poor insulator. In an attempt to mitigate O loss from the TiO{sub 2}, top and bottom Al{sub 2}O{sub 3} layers are added to the TiO{sub 2} gate dielectric as oxygen barriers. However, they are found to be ineffective, due to Al{sub 2}O{sub 3}-TiO{sub 2} interdiffusion during activation annealing. Bottom HfO{sub 2}/Si{sub 3}N{sub 4} interlayers are found to serve as more effective oxygen barriers, reducing, though not preventing, oxygen downdiffusion.

  15. Role of base stacking and sequence context in the inhibition of yeast DNA polymerase eta by pyrene nucleotide.

    PubMed

    Hwang, Hanshin; Taylor, John-Stephen

    2004-11-23

    The Y family DNA polymerase yeast pol eta inserts pyrene deoxyribose monophosphate (dPMP) in preference to A opposite an abasic site, the 3'-T of a thymine dimer, and a normal T with almost equal efficiency. In contrast, pol A family polymerases such as Klenow fragment and T7 DNA polymerase only insert dPMP efficiently opposite an abasic site and the 3'-T of a thymine dimer but not opposite undamaged DNA. Pyrene nucleotide is also an efficient chain-terminating inhibitor of DNA synthesis by pol eta but not by Klenow fragment or T7 DNA polymerase. To better understand the origin of the efficiency and sequence specificity of dPMP insertion by pol eta, the kinetics of dPMP insertion opposite various templates have been determined. In one sequence context, the efficiency of dPMP insertion increases 4.6-fold opposite G < A < T < C, suggesting that the templating nucleotide modulates dPMP insertion efficiency by having to destack prior to dPTP binding. The efficiency of insertion of dPMP opposite T in the same sequence context increases 7-fold for primers terminating in G < A < C < T and is similar to that observed for nontemplated blunt-end extension, suggesting that stacking interactions between the pyrene and the primer terminus are also important. On heterogeneous templates, the average selectivity for dPMP insertion relative to the complementary dNMP decreases in the order of dAMP > dGMP > dTMP > dCMP, from a high of 5.8 when dAMP is to be inserted following a T to a low of 0.5 when dCMP is to be inserted following a C. The relative preference for dPMP insertion at a given site can be largely explained by the energetic cost of destacking the templating base and stacking of pyrene nucleotide relative to that of stacking and base pairing the complementary nucleotide. Thus, pyrene nucleotide represents a novel class of nucleotide-based chain-terminating DNA synthesis inhibitors whose base portion consists of a hydrophobic, non-hydrogen bonding, base-pair mimic.

  16. Zone structure and polarization properties of the stack of a metamaterial-based cholesteric liquid crystal and isotropic medium layers

    NASA Astrophysics Data System (ADS)

    Gevorgyan, A. H.; Matinyan, G. K.

    2014-05-01

    The optical properties of a stack of metamaterial-based cholesteric liquid crystal (CLC) layers and isotropic medium layers are investigated. The problem is solved by a modification of Ambartsumian's layer addition method. CLCs with two types of chiral nihility are defined. The peculiarities of the reflection spectra of this system are investigated and it is shown that the reflection spectra of the stacks of CLC layers of these two types differ from each other. Besides, in contrast to the single CLC layer case, these systems have multiple photonic band gaps. There are two types of such gaps: those selective with respect to polarization of the incident light and nonselective ones. It is shown that the system eigenpolarizations mainly coincide with the quasi-orthogonal, quasi-circular polarizations for normally incident light, except the regions of diffraction reflection selective with respect to the polarization of incident light. The influence of the CLC sublayer thick-nesses, the incidence angle, the local dielectric (magnetic) anisotropy of the CLC layers, and the refractive indices and thicknesses of the isotropic media layers on the reflection spectra and other optical characteristics of the system is investigated.

  17. Benchmark studies on the building blocks of DNA. 3. Watson-Crick and stacked base pairs.

    PubMed

    Szalay, Péter G; Watson, Thomas; Perera, Ajith; Lotrich, Victor; Bartlett, Rodney J

    2013-04-18

    Excited states of stacked adenine-thymine and guanine-cytosine pairs as well as the Watson-Crick pair of guanine-thymine have been investigated using the equation of motion coupled-cluster (EOM-CC) method with single and double as well as approximate triple excitations. Transitions have been assigned, and the form of the excitations has been analyzed. The majority of the excitations could be classified as localized on the nucleobases, but for all three studied systems, charge-transfer (CT) transitions could also be identified. The main aim of this study was to compare the performance of lower-level methods (ADC(2) and TDDFT) to the high-level EOM-CC ones. It was shown that both ADC(2) and TDDFT with long-range correction have nonsystematic error in excitation energies, causing alternation of the energetic ordering of the excitations. Considering the high costs of the EOM-CC calculations, there is a need for reliable new approximate methods.

  18. Resonant Tunneling Diodes Based on Stacked Self-Assembled Ge/Si Islands

    DTIC Science & Technology

    2000-06-23

    two resonances, one at 0.49 V, which exhibits negative differential resistance ( NDR ) and a second shoulder at about 0.34 V. The two features can be...charge carriers. Figure 2 also shows (upper dotted curve) that NDR is conserved up to 45 K. Information about the dimensionality of the tunneling

  19. Fuel cell stack arrangements

    DOEpatents

    Kothmann, Richard E.; Somers, Edward V.

    1982-01-01

    Arrangements of stacks of fuel cells and ducts, for fuel cells operating with separate fuel, oxidant and coolant streams. An even number of stacks are arranged generally end-to-end in a loop. Ducts located at the juncture of consecutive stacks of the loop feed oxidant or fuel to or from the two consecutive stacks, each individual duct communicating with two stacks. A coolant fluid flows from outside the loop, into and through cooling channels of the stack, and is discharged into an enclosure duct formed within the loop by the stacks and seals at the junctures at the stacks.

  20. Tunnel magnetoresistance properties and annealing stability in perpendicular anisotropy MgO-based magnetic tunnel junctions with different stack structures

    NASA Astrophysics Data System (ADS)

    Mizunuma, K.; Ikeda, S.; Sato, H.; Yamanouchi, M.; Gan, H. D.; Miura, K.; Yamamoto, H.; Hayakawa, J.; Matsukura, F.; Ohno, H.

    2011-04-01

    We have investigated the effect of stack structures on tunnel magnetoresistance (TMR) properties in perpendicular anisotropy MgO-based magnetic tunnel junctions (p-MTJs) with CoFe/Pd multilayer and CoFeB insertion. By adopting Ta and Ru cap-layers, the TMR ratios of 113 and 106% are obtained at annealing temperature (Ta) of 325 °C, respectively. Particularly, the Ru cap-layer is effective in realizing a TMR ratio of 100% at Ta = 350 °C. By replacing (Co25Fe75)80B20 with (Co25Fe75)85B15, the TMR ratio increased quickly at low Ta, reaching a maximum of 120% at Ta = 300 °C.

  1. Note: A short-pulse high-intensity molecular beam valve based on a piezoelectric stack actuator

    SciTech Connect

    Abeysekera, Chamara; Joalland, Baptiste; Shi, Yuanyuan; Kamasah, Alexander; Oldham, James M.; Suits, Arthur G.

    2014-11-15

    Solenoid and piezoelectric disk valves, which are widely used to generate molecular beam pulses, still suffer from significant restrictions, such as pulse durations typically >50 μs, low repetition rates, and limited gas flows and operational times. Much of this arises owing to the limited forces these actuators can achieve. To overcome these limitations, we have developed a new pulsed valve based on a high-force piezoelectric stack actuator. We show here that operation with pulse durations as low as 20 μs and repetition rates up to 100 Hz can be easily achieved by operating the valve in conjunction with a commercial fast high-voltage switch. We outline our design and demonstrate its performance with molecular beam characterization via velocity map ion imaging.

  2. Contour detection based on wavelet differentiation

    NASA Astrophysics Data System (ADS)

    Bezuglov, D.; Kuzin, A.; Voronin, V.

    2016-05-01

    This work proposes a novel algorithm for contour detection based on high-performance algorithm of wavelet analysis for multimedia applications. To solve the noise effect on the result of peaking in this paper we consider the direct and inverse wavelet differentiation. Extensive experimental evaluation on noisy images demonstrates that our contour detection method significantly outperform competing algorithms. The proposed algorithm provides a means of coupling our system to recognition application such as detection and identification of vehicle number plate.

  3. A model-based approach for current voltage analyses to quantify degradation and fuel distribution in solid oxide fuel cell stacks

    NASA Astrophysics Data System (ADS)

    Linder, Markus; Hocker, Thomas; Meier, Christoph; Holzer, Lorenz; Friedrich, K. Andreas; Iwanschitz, Boris; Mai, Andreas; Schuler, J. Andreas

    2015-08-01

    Reliable quantification and thorough interpretation of the degradation of solid oxide fuel cell (SOFC) stacks under real conditions is critical for the improvement of its long-term stability. The degradation behavior is often analyzed based on the evolution of current-voltage (V,I) curves. However, these overall resistances often contain unavoidable fluctuations in the fuel gas amount and composition and hence are difficult to interpret. Studying the evolution of internal repeat unit (RU) resistances is a more appropriate measure to assess stack degradation. RU-resistances follow from EIS-data through subtraction of the gas concentration impedance from the overall steady-state resistance. In this work a model-based approach where a local equilibrium model is used for spatial discretization of a SOFC stack RU running on hydrocarbon mixtures such as natural gas. Since under stack operation, fuel leakages, uneven fuel distribution and varying natural gas composition can influence the performance, they are taken into account by the model. The model extracts the time-dependent internal resistance from (V,I)-data and local species concentration without any fitting parameters. RU resistances can be compared with the sum of the resistances of different components that allows one to make links between laboratory degradation experiments and the behavior of SOFC stacks during operation.

  4. Binding of echinomycin to d(GCGC)2 and d(CCGG)2: distinct stacking interactions dictate the sequence-dependent formation of Hoogsteen base pairs.

    PubMed

    Gallego, J; Luque, F J; Orozco, M; Gago, F

    1994-08-01

    Molecular dynamics simulations have been used to explore the behavior of the complexes of echinomycin with the DNA tetramers d(GCGC)2 and d(CCGG)2 in which the terminal bases have been paired according to either a Hoogsteen or a Watson-Crick hydrogen bonding scheme. The energy of the four resulting complexes has been monitored along the dynamics trajectories and the interaction energy between echinomycin and DNA has been decomposed into contributions arising from the planar aromatic systems and the depsipeptide part of the antibiotic. Our calculations predict a large increase in overall stabilization upon protonation of the terminal cytosines and subsequent Hoogsteen pair formation in the complex of echinomycin with d(GCGC)2 but not with d(CCGG)2, in agreement with the experimental evidence [Gao and Patel, Quart. Rev. Biophys. 22, 93-138 (1989)]. The conformational preferences appear to arise mainly from differential stacking interactions in which the electrostatic component is shown to play a dominant role. Differences in hydrogen bonding patterns are also found among the complexes and these are compared in relation to available crystal structures. The binding of echinomycin to DNA appears as a complex process involving many interrelated variables.

  5. Electrochemical cell stack assembly

    DOEpatents

    Jacobson, Craig P.; Visco, Steven J.; De Jonghe, Lutgard C.

    2010-06-22

    Multiple stacks of tubular electrochemical cells having a dense electrolyte disposed between an anode and a cathode preferably deposited as thin films arranged in parallel on stamped conductive interconnect sheets or ferrules. The stack allows one or more electrochemical cell to malfunction without disabling the entire stack. Stack efficiency is enhanced through simplified gas manifolding, gas recycling, reduced operating temperature and improved heat distribution.

  6. Thermodynamic contributions for the incorporation of GTA triplets within canonical TAT/TAT and C+GC/C+GC base-triplet stacks of DNA triplexes.

    PubMed

    Soto, Ana Maria; Marky, Luis A

    2002-10-15

    Nucleic acid triple helices may be used in the control of gene expression. One limitation of using triplex-forming oligonucleotides as therapeutic agents is that their target sequences are limited to homopurine tracts. To increase the repertoire of sequences that can be targeted, it has been postulated that a guanine can target a thymidine forming a stable GTA mismatch triplet. In this work, we have used a combination of optical and calorimetric techniques to determine thermodynamic unfolding profiles of two triplexes containing a single GTA triplet, d(A(3)TA(3)C(5)T(3)AT(3)C(5)T(3)GT(3)) (ATA) and d(AGTGAC(5)TCACTC(5)TCGCT) (GTG), and their control triplexes, d(A(7)C(5)T(7)C(5)T(7)) (TAT7) and d(AGAGAC(5)TCTCTC(5)TCTCT) (AG5T). In general, the presence of a GTA mismatch in DNA triplexes is destabilizing; however, this destabilization is greater when placed in a C(+)GC/C(+)GC base-triplet stack than between a TAT/TAT stack. These destabilizations are accompanied by a reduced unfolding enthalpy of approximately 10 kcal/mol, suggesting a decrease in the base stacking contributions surrounding the mismatch. Relative to their corresponding control triplexes, the folding of ATA is accompanied by a lower counterion uptake and a similar proton uptake, while GTG folding is accompanied by an increase in the counterion and proton uptakes. These effects are consistent with the observed decrease in stacking interactions. The overall results indicate that the main difficulty of targeting pyrimidine interruptions is that the decrease in stacking contributions, due to the incorporation of a GTA mismatch, affects the stability of the neighboring base triplets. This suggests that nucleotide analogues that increase the strength of these base-triplet stacks will result in a more effective targeting of pyrimidine interruptions.

  7. Silicon-based shortwave differential photodetector

    NASA Astrophysics Data System (ADS)

    Gavrushko, V. V.; Ionov, A. S.; Kadriev, O. R.; Lastkin, V. A.

    2017-02-01

    The silicon-based photodetector that contains two n +- p photodiode with equal areas has been described. One of the photodiodes had a wide spectral characteristic with high sensitivity in the UV range. The sensitivity of the second photodiode was decreased in the shortwave range via the formation of additional recombination centers in the near-surface region using the implantation of As ions. The study of the spectral sensitivity of the differential signal obtained by photocurrent subtraction has revealed a profound shortwave spectral characteristic. The boundaries of spectral range at λ0.5 were in the limits of 0.27-0.44 μm. The maximum sensitivity corresponded to λmax = 0.36 μm. The sensitivity of the differential channel at this wavelength reached 83% of that of the wide-range channel.

  8. Macromolecular differentiation of Golgi stacks in root tips of Arabidopsis and Nicotiana seedlings as visualized in high pressure frozen and freeze-substituted samples

    NASA Technical Reports Server (NTRS)

    Staehelin, L. A.; Giddings, T. H. Jr; Kiss, J. Z.; Sack, F. D.

    1990-01-01

    The plant root tip represents a fascinating model system for studying changes in Golgi stack architecture associated with the developmental progression of meristematic cells to gravity sensing columella cells, and finally to "young" and "old", polysaccharide-slime secreting peripheral cells. To this end we have used high pressure freezing in conjunction with freeze-substitution techniques to follow developmental changes in the macromolecular organization of Golgi stacks in root tips of Arabidopsis and Nicotiana. Due to the much improved structural preservation of all cells under investigation, our electron micrographs reveal both several novel structural features common to all Golgi stacks, as well as characteristic differences in morphology between Golgi stacks of different cell types. Common to all Golgi stacks are clear and discrete differences in staining patterns and width of cis, medial and trans cisternae. Cis cisternae have the widest lumina (approximately 30 nm) and are the least stained. Medial cisternae are narrower (approximately 20 nm) and filled with more darkly staining products. Most trans cisternae possess a completely collapsed lumen in their central domain, giving rise to a 4-6 nm wide dark line in cross-sectional views. Numerous vesicles associated with the cisternal margins carry a non-clathrin type of coat. A trans Golgi network with clathrin coated vesicles is associated with all Golgi stacks except those of old peripheral cells. It is easily distinguished from trans cisternae by its blebbing morphology and staining pattern. The zone of ribosome exclusion includes both the Golgi stack and the trans Golgi network. Intercisternal elements are located exclusively between trans cisternae of columella and peripheral cells, but not meristematic cells. In older peripheral cells only trans cisternae exhibit slime-related staining. Golgi stacks possessing intercisternal elements also contain parallel rows of freeze-fracture particles in their trans

  9. Effect of pore architecture and stacking direction on mechanical properties of solid freeform fabrication-based scaffold for bone tissue engineering.

    PubMed

    Lee, Jung-Seob; Cha, Hwang Do; Shim, Jin-Hyung; Jung, Jin Woo; Kim, Jong Young; Cho, Dong-Woo

    2012-07-01

    Fabrication of a three-dimensional (3D) scaffold with increased mechanical strength may be an essential requirement for more advanced bone tissue engineering scaffolds. Various material- and chemical-based approaches have been explored to enhance the mechanical properties of engineered bone tissue scaffolds. In this study, the effects of pore architecture and stacking direction on the mechanical and cell proliferation properties of a scaffold were investigated. The 3D scaffold was prepared using solid freeform fabrication technology with a multihead deposition system. Various types of scaffolds with different pore architectures (lattice, stagger, and triangle types) and stacking directions (horizontal and vertical directions) were fabricated with a blend of polycaprolactone and poly lactic-co-glycolic acid. In compression tests, the triangle-type scaffold was the strongest among the experimental groups. Stacking direction affected the mechanical properties of scaffolds. An in vitro cell counting kit-8 assay showed no significant differences in optical density depending on the different pore architectures and stacking directions. In conclusion, mechanical properties of scaffolds can be enhanced by controlling pore architecture and stacking direction.

  10. Model based examination on influence of stack series connection and pipe diameters on efficiency of vanadium redox flow batteries under consideration of shunt currents

    NASA Astrophysics Data System (ADS)

    König, S.; Suriyah, M. R.; Leibfried, T.

    2015-05-01

    Model based design and optimization of large scale vanadium redox flow batteries can help to decrease system costs and to increase system efficiency. System complexity, e.g. the combination of hydraulic and electric circuits requires a multi-physic modeling approach to cover all dependencies between subsystems. A Matlab/Simulink model is introduced, which covers a variable number of stacks and their hydraulic circuit, as well as the impact of shunt currents. Using analytic approaches that are afterward crosschecked with the developed model, a six-stack, 54 kW/216 kWh system is designed. With the simulation results it is demonstrated how combining stacks to strings and varying pipe diameters affects system efficiency. As cell voltage is comparatively low, connecting stacks in series to strings seems reasonable to facilitate grid connection. It is shown that this significantly lowers system efficiency. Hydraulic circuit design is varied to lower efficiency drop. In total, four different electric designs are equipped with 21 hydraulic design variations to quantify dependencies between electric and hydraulic subsystems. Furthermore, it is examined whether additional shunt current losses through stack series connection can be compensated by more efficient energy conversion systems.

  11. Prediction of temperature profile in MCFC stack

    SciTech Connect

    Lee, Kab Soo; Kim, Hwayong; Hong, Seong-An; Lim, Hee Chun

    1996-12-31

    A simple three dimensional model was developed to simulate the temperature distribution and the performance of various flow types of the MCFC stack. The objective of this study was to understand the complicated phenomena occurring in the MCFC stack and to supply the basic data for optimizing the operating condition of the MCFC stack. Assuming that the stack consists of a number of differential elements which have uniform temperature and gas composition, the model was solved by finite difference method. The performance of this model was demonstrated by comparing the calculated value with experimental data of the 1.5kW class co-flow type MCFC stack operated in KIST. This model can be utilized as a simple diagnostic tool in case of the operational abnormality such as the hot spot which often occurs inside the stack.

  12. Electronic interactions in helical stacked arrays of the modified DNA base pyrrolocytosine.

    PubMed

    Neelakandan, Prakash P; McCullagh, Martin; Schatz, George C; Lewis, Frederick D

    2012-05-03

    The thermal stability and ultraviolet and circular dichroism spectra of nine synthetic DNA hairpins possessing one or more (P)C-G base pairs ((P)C = pyrrolocytosine) have been investigated. One group of hairpins possess 1-5 sequential (P)C-G base pairs while another group possess two (P)C-G base pairs separated by 1-3 A-T base pairs. The first group displays a nearly linear dependence of UV and exciton-coupled circular dichroism (EC-CD) band intensity upon the number of neighboring chromophores, whereas the second group shows weak EC-CD only at the shortest distances between non-neighboring chromophores. This result stands in marked contrast to the exciton coupling seen between stilbene chromophores separated by as many as a dozen base pairs. The weak exciton coupling between non-neighboring (P)C chromophores, like that of the natural nucelobases, is attributed to their relatively weak electronic transition dipoles.

  13. 1.5 to 1.6 μm pulsed laser diode bars based on epitaxially stacked AlGaInAs/InP heterostructures

    SciTech Connect

    Gorlachuk, P V; Ryaboshtan, Yu L; Ladugin, M A; Padalitsa, A A; Marmalyuk, A A; Kurnosov, V D; Kurnosov, K V; Zhuravleva, O V; Romantsevich, V I; Chernov, R V; Ivanov, A V; Simakov, V A

    2013-09-30

    This paper describes 1.55-μm pulsed laser diode bars based on epitaxially stacked double AlGaInAs/InP heterostructures. The output power of such bars is 1.8 times that of singleheterostructure laser diode bars. We present the key characteristics of the laser sources. (lasers)

  14. Nonspecific base recognition mediated by water bridges and hydrophobic stacking in ribonuclease I from Escherichia coli

    PubMed Central

    Rodriguez, Sergio Martinez; Panjikar, Santosh; Van Belle, Karolien; Wyns, Lode; Messens, Joris; Loris, Remy

    2008-01-01

    The crystal structure of Escherichia coli ribonuclease I (EcRNase I) reveals an RNase T2-type fold consisting of a conserved core of six β-strands and three α-helices. The overall architecture of the catalytic residues is very similar to the plant and fungal RNase T2 family members, but the perimeter surrounding the active site is characterized by structural elements specific for E. coli. In the structure of EcRNase I in complex with a substrate-mimicking decadeoxynucleotide d(CGCGATCGCG), we observe a cytosine bound in the B2 base binding site and mixed binding of thymine and guanine in the B1 base binding site. The active site residues His55, His133, and Glu129 interact with the phosphodiester linkage only through a set of water molecules. Residues forming the B2 base recognition site are well conserved among bacterial homologs and may generate limited base specificity. On the other hand, the B1 binding cleft acquires true base aspecificity by combining hydrophobic van der Waals contacts at its sides with a water-mediated hydrogen-bonding network at the bottom. This B1 base recognition site is highly variable among bacterial sequences and the observed interactions are unique to EcRNaseI and a few close relatives. PMID:18305191

  15. New horizon for high performance Mg-based biomaterial with uniform degradation behavior: Formation of stacking faults

    PubMed Central

    Zhang, Jinghuai; Xu, Chi; Jing, Yongbin; Lv, Shuhui; Liu, Shujuan; Fang, Daqing; Zhuang, Jinpeng; Zhang, Milin; Wu, Ruizhi

    2015-01-01

    Designing the new microstructure is an effective way to accelerate the biomedical application of magnesium (Mg) alloys. In this study, a novel Mg–8Er–1Zn alloy with profuse nano-spaced basal plane stacking faults (SFs) was prepared by combined processes of direct-chill semi-continuous casting, heat-treatment and hot-extrusion. The formation of SFs made the alloy possess outstanding comprehensive performance as the biodegradable implant material. The ultimate tensile strength (UTS: 318 MPa), tensile yield strength (TYS: 207 MPa) and elongation (21%) of the alloy with SFs were superior to those of most reported degradable Mg-based alloys. This new alloy showed acceptable biotoxicity and degradation rate (0.34 mm/year), and the latter could be further slowed down through optimizing the microstructure. Most amazing of all, the uniquely uniform in vitro/vivo corrosion behavior was obtained due to the formation of SFs. Accordingly we proposed an original corrosion mechanism for the novel Mg alloy with SFs. The present study opens a new horizon for developing new Mg-based biomaterials with highly desirable performances. PMID:26349676

  16. A hybrid MBE-based growth method for large-area synthesis of stacked hexagonal boron nitride/graphene heterostructures.

    PubMed

    Wofford, Joseph M; Nakhaie, Siamak; Krause, Thilo; Liu, Xianjie; Ramsteiner, Manfred; Hanke, Michael; Riechert, Henning; J Lopes, J Marcelo

    2017-02-27

    Van der Waals heterostructures combining hexagonal boron nitride (h-BN) and graphene offer many potential advantages, but remain difficult to produce as continuous films over large areas. In particular, the growth of h-BN on graphene has proven to be challenging due to the inertness of the graphene surface. Here we exploit a scalable molecular beam epitaxy based method to allow both the h-BN and graphene to form in a stacked heterostructure in the favorable growth environment provided by a Ni(111) substrate. This involves first saturating a Ni film on MgO(111) with C, growing h-BN on the exposed metal surface, and precipitating the C back to the h-BN/Ni interface to form graphene. The resulting laterally continuous heterostructure is composed of a top layer of few-layer thick h-BN on an intermediate few-layer thick graphene, lying on top of Ni/MgO(111). Examinations by synchrotron-based grazing incidence diffraction, X-ray photoemission spectroscopy, and UV-Raman spectroscopy reveal that while the h-BN is relaxed, the lattice constant of graphene is significantly reduced, likely due to nitrogen doping. These results illustrate a different pathway for the production of h-BN/graphene heterostructures, and open a new perspective for the large-area preparation of heterosystems combining graphene and other 2D or 3D materials.

  17. New horizon for high performance Mg-based biomaterial with uniform degradation behavior: Formation of stacking faults

    NASA Astrophysics Data System (ADS)

    Zhang, Jinghuai; Xu, Chi; Jing, Yongbin; Lv, Shuhui; Liu, Shujuan; Fang, Daqing; Zhuang, Jinpeng; Zhang, Milin; Wu, Ruizhi

    2015-09-01

    Designing the new microstructure is an effective way to accelerate the biomedical application of magnesium (Mg) alloys. In this study, a novel Mg-8Er-1Zn alloy with profuse nano-spaced basal plane stacking faults (SFs) was prepared by combined processes of direct-chill semi-continuous casting, heat-treatment and hot-extrusion. The formation of SFs made the alloy possess outstanding comprehensive performance as the biodegradable implant material. The ultimate tensile strength (UTS: 318 MPa), tensile yield strength (TYS: 207 MPa) and elongation (21%) of the alloy with SFs were superior to those of most reported degradable Mg-based alloys. This new alloy showed acceptable biotoxicity and degradation rate (0.34 mm/year), and the latter could be further slowed down through optimizing the microstructure. Most amazing of all, the uniquely uniform in vitro/vivo corrosion behavior was obtained due to the formation of SFs. Accordingly we proposed an original corrosion mechanism for the novel Mg alloy with SFs. The present study opens a new horizon for developing new Mg-based biomaterials with highly desirable performances.

  18. A hybrid MBE-based growth method for large-area synthesis of stacked hexagonal boron nitride/graphene heterostructures

    PubMed Central

    Wofford, Joseph M.; Nakhaie, Siamak; Krause, Thilo; Liu, Xianjie; Ramsteiner, Manfred; Hanke, Michael; Riechert, Henning; J. Lopes, J. Marcelo

    2017-01-01

    Van der Waals heterostructures combining hexagonal boron nitride (h-BN) and graphene offer many potential advantages, but remain difficult to produce as continuous films over large areas. In particular, the growth of h-BN on graphene has proven to be challenging due to the inertness of the graphene surface. Here we exploit a scalable molecular beam epitaxy based method to allow both the h-BN and graphene to form in a stacked heterostructure in the favorable growth environment provided by a Ni(111) substrate. This involves first saturating a Ni film on MgO(111) with C, growing h-BN on the exposed metal surface, and precipitating the C back to the h-BN/Ni interface to form graphene. The resulting laterally continuous heterostructure is composed of a top layer of few-layer thick h-BN on an intermediate few-layer thick graphene, lying on top of Ni/MgO(111). Examinations by synchrotron-based grazing incidence diffraction, X-ray photoemission spectroscopy, and UV-Raman spectroscopy reveal that while the h-BN is relaxed, the lattice constant of graphene is significantly reduced, likely due to nitrogen doping. These results illustrate a different pathway for the production of h-BN/graphene heterostructures, and open a new perspective for the large-area preparation of heterosystems combining graphene and other 2D or 3D materials. PMID:28240323

  19. Light-emitting self-assembled peptide nucleic acids exhibit both stacking interactions and Watson-Crick base pairing.

    PubMed

    Berger, Or; Adler-Abramovich, Lihi; Levy-Sakin, Michal; Grunwald, Assaf; Liebes-Peer, Yael; Bachar, Mor; Buzhansky, Ludmila; Mossou, Estelle; Forsyth, V Trevor; Schwartz, Tal; Ebenstein, Yuval; Frolow, Felix; Shimon, Linda J W; Patolsky, Fernando; Gazit, Ehud

    2015-04-01

    The two main branches of bionanotechnology involve the self-assembly of either peptides or DNA. Peptide scaffolds offer chemical versatility, architectural flexibility and structural complexity, but they lack the precise base pairing and molecular recognition available with nucleic acid assemblies. Here, inspired by the ability of aromatic dipeptides to form ordered nanostructures with unique physical properties, we explore the assembly of peptide nucleic acids (PNAs), which are short DNA mimics that have an amide backbone. All 16 combinations of the very short di-PNA building blocks were synthesized and assayed for their ability to self-associate. Only three guanine-containing di-PNAs-CG, GC and GG-could form ordered assemblies, as observed by electron microscopy, and these di-PNAs efficiently assembled into discrete architectures within a few minutes. The X-ray crystal structure of the GC di-PNA showed the occurrence of both stacking interactions and Watson-Crick base pairing. The assemblies were also found to exhibit optical properties including voltage-dependent electroluminescence and wide-range excitation-dependent fluorescence in the visible region.

  20. Light-emitting self-assembled peptide nucleic acids exhibit both stacking interactions and Watson-Crick base pairing

    NASA Astrophysics Data System (ADS)

    Berger, Or; Adler-Abramovich, Lihi; Levy-Sakin, Michal; Grunwald, Assaf; Liebes-Peer, Yael; Bachar, Mor; Buzhansky, Ludmila; Mossou, Estelle; Forsyth, V. Trevor; Schwartz, Tal; Ebenstein, Yuval; Frolow, Felix; Shimon, Linda J. W.; Patolsky, Fernando; Gazit, Ehud

    2015-05-01

    The two main branches of bionanotechnology involve the self-assembly of either peptides or DNA. Peptide scaffolds offer chemical versatility, architectural flexibility and structural complexity, but they lack the precise base pairing and molecular recognition available with nucleic acid assemblies. Here, inspired by the ability of aromatic dipeptides to form ordered nanostructures with unique physical properties, we explore the assembly of peptide nucleic acids (PNAs), which are short DNA mimics that have an amide backbone. All 16 combinations of the very short di-PNA building blocks were synthesized and assayed for their ability to self-associate. Only three guanine-containing di-PNAs—CG, GC and GG—could form ordered assemblies, as observed by electron microscopy, and these di-PNAs efficiently assembled into discrete architectures within a few minutes. The X-ray crystal structure of the GC di-PNA showed the occurrence of both stacking interactions and Watson-Crick base pairing. The assemblies were also found to exhibit optical properties including voltage-dependent electroluminescence and wide-range excitation-dependent fluorescence in the visible region.

  1. A PMT-like high gain avalanche photodiode based on GaN/AlN periodically stacked structure

    NASA Astrophysics Data System (ADS)

    Zheng, Jiyuan; Wang, Lai; Wu, Xingzhao; Hao, Zhibiao; Sun, Changzheng; Xiong, Bing; Luo, Yi; Han, Yanjun; Wang, Jian; Li, Hongtao; Brault, Julien; Matta, Samuel; Khalfioui, Mohamed Al; Yan, Jianchang; Wei, Tongbo; Zhang, Yun; Wang, Junxi

    2016-12-01

    Avalanche photodiode (APD) has been intensively investigated as a promising candidate to replace the bulky and fragile photomultiplier tube (PMT) for weak light detection. However, the performance of most available APDs is barely satisfactory compared to that of the PMTs because of inter-valley scattering. Here, we demonstrate a PMT-like APD based on GaN/AlN periodically stacked-structure (PSS), in which the electrons encounter a much less inter-valley scattering during transport than holes. Uni-directional avalanche takes place with a high efficiency. According to our simulations based on a PSS with GaN (10 nm)/AlN (10 nm) in each period, the probability for electrons to trigger ionization in each cycle can reach as high as 80%, while that for holes is only 4%. A record high and stable gain (104) with a low ionization coefficient ratio of 0.05 is demonstrated under a constant bias in a prototype device.

  2. Molecular recognition of DNA base pairs by the formamido/pyrrole and formamido/imidazole pairings in stacked polyamides

    PubMed Central

    Buchmueller, Karen L.; Staples, Andrew M.; Uthe, Peter B.; Howard, Cameron M.; Pacheco, Kimberly A. O.; Cox, Kari K.; Henry, James A.; Bailey, Suzanna L.; Horick, Sarah M.; Nguyen, Binh; Wilson, W. David; Lee, Moses

    2005-01-01

    Polyamides containing an N-terminal formamido (f) group bind to the minor groove of DNA as staggered, antiparallel dimers in a sequence-specific manner. The formamido group increases the affinity and binding site size, and it promotes the molecules to stack in a staggered fashion thereby pairing itself with either a pyrrole (Py) or an imidazole (Im). There has not been a systematic study on the DNA recognition properties of the f/Py and f/Im terminal pairings. These pairings were analyzed here in the context of f-ImPyPy, f-ImPyIm, f-PyPyPy and f-PyPyIm, which contain the central pairing modes, –ImPy– and –PyPy–. The specificity of these triamides towards symmetrical recognition sites allowed for the f/Py and f/Im terminal pairings to be directly compared by SPR, CD and ΔTM experiments. The f/Py pairing, when placed next to the –ImPy– or –PyPy– central pairings, prefers A/T and T/A base pairs to G/C base pairs, suggesting that f/Py has similar DNA recognition specificity to Py/Py. With –ImPy– central pairings, f/Im prefers C/G base pairs (>10 times) to the other Watson–Crick base pairs; therefore, f/Im behaves like the Py/Im pair. However, the f/Im pairing is not selective for the C/G base pair when placed next to the –PyPy– central pairings. PMID:15703305

  3. Stacking interactions and DNA intercalation

    SciTech Connect

    Li, Dr. Shen; Cooper, Valentino R; Thonhauser, Prof. Timo; Lundqvist, Prof. Bengt I.; Langreth, David C.

    2009-01-01

    The relationship between stacking interactions and the intercalation of proflavine and ellipticine within DNA is investigated using a nonempirical van der Waals density functional for the correlation energy. Our results, employing a binary stack model, highlight fundamental, qualitative differences between base-pair base-pair interactions and that of the stacked intercalator base pair system. Most notable result is the paucity of torque which so distinctively defines the Twist of DNA. Surprisingly, this model, when combined with a constraint on the twist of the surrounding base-pair steps to match the observed unwinding of the sugar-phosphate backbone, was sufficient for explaining the experimentally observed proflavine intercalator configuration. Our extensive mapping of the potential energy surface of base-pair intercalator interactions can provide valuable information for future nonempirical studies of DNA intercalation dynamics.

  4. Silicon-Based Thermoelectrics: Harvesting Low Quality Heat Using Economically Printed Flexible Nanostructured Stacked Thermoelectric Junctions

    SciTech Connect

    2010-03-01

    Broad Funding Opportunity Announcement Project: UIUC is experimenting with silicon-based materials to develop flexible thermoelectric devices—which convert heat into energy—that can be mass-produced at low cost. A thermoelectric device, which resembles a computer chip, creates electricity when a different temperature is applied to each of its sides. Existing commercial thermoelectric devices contain the element tellurium, which limits production levels because tellurium has become increasingly rare. UIUC is replacing this material with microscopic silicon wires that are considerably cheaper and could be equally effective. Improvements in thermoelectric device production could return enough wasted heat to add up to 23% to our current annual electricity production.

  5. Low-temperature-dependent property in an avalanche photodiode based on GaN/AlN periodically-stacked structure

    PubMed Central

    Zheng, Jiyuan; Wang, Lai; Yang, Di; Yu, Jiadong; Meng, Xiao; Hao, Zhibiao; Sun, Changzheng; Xiong, Bing; Luo, Yi; Han, Yanjun; Wang, Jian; Li, Hongtao; Li, Mo; Li, Qian

    2016-01-01

    In ultra-high sensitive APDs, a vibrate of temperature might bring a fatal decline of the multiplication performance. Conventional method to realize a temperature-stable APD focuses on the optimization of device structure, which has limited effects. While in this paper, a solution by reducing the carrier scattering rate based on an GaN/AlN periodically-stacked structure (PSS) APD is brought out to improve temperature stability essentially. Transport property is systematically investigated. Compared with conventional GaN homojunction (HJ) APDs, electron suffers much less phonon scatterings before it achieves ionization threshold energy and more electrons occupy high energy states in PSS APD. The temperature dependence of ionization coefficient and energy distribution is greatly reduced. As a result, temperature stability on gain is significantly improved when the ionization happens with high efficiency. The change of gain for GaN (10 nm)/AlN (10 nm) PSS APD from 300 K to 310 K is about 20% lower than that for HJ APD. Additionally, thicker period length is found favorable to ionization coefficient ratio but a bit harmful to temperature stability, while increasing the proportion of AlN at each period in a specific range is found favorable to both ionization coefficient ratio and temperature stability. PMID:27775088

  6. Tuning Coupling Behavior of Stacked Heterostructures Based on MoS2, WS2, and WSe2

    PubMed Central

    Wang, Fang; Wang, Junyong; Guo, Shuang; Zhang, Jinzhong; Hu, Zhigao; Chu, Junhao

    2017-01-01

    The interlayer interaction of vertically stacked heterojunctions is very sensitive to the interlayer spacing, which will affect the coupling between the monolayers and allow band structure modulation. Here, with the aid of density functional theory (DFT) calculations, an interesting phenomenon is found that MoS2-WS2, MoS2-WSe2, and WS2-WSe2 heterostructures turn into direct-gap semiconductors from indirect-gap semiconductors with increasing the interlayer space. Moreover, the electronic structure changing process with interlayer spacing of MoS2-WS2, MoS2-WSe2, and WS2-WSe2 is different from each other. With the help of variable-temperature spectral experiment, different electronic transition properties of MoS2-WS2, MoS2-WSe2, and WS2-WSe2 have been demonstrated. The transition transformation from indirect to direct can be only observed in the MoS2-WS2 heterostructure, as the valence band maximum (VBM) at the Γ point in the MoS2-WSe2 and WS2-WSe2 heterostructure is less sensitive to the interlayer spacing than those from the MoS2-WS2 heterostructure. The present work highlights the significance of the temperature tuning in interlayer coupling and advance the research of MoS2-WS2, MoS2-WSe2, and WS2-WSe2 based device applications. PMID:28303932

  7. Tuning Coupling Behavior of Stacked Heterostructures Based on MoS2, WS2, and WSe2

    NASA Astrophysics Data System (ADS)

    Wang, Fang; Wang, Junyong; Guo, Shuang; Zhang, Jinzhong; Hu, Zhigao; Chu, Junhao

    2017-03-01

    The interlayer interaction of vertically stacked heterojunctions is very sensitive to the interlayer spacing, which will affect the coupling between the monolayers and allow band structure modulation. Here, with the aid of density functional theory (DFT) calculations, an interesting phenomenon is found that MoS2-WS2, MoS2-WSe2, and WS2-WSe2 heterostructures turn into direct-gap semiconductors from indirect-gap semiconductors with increasing the interlayer space. Moreover, the electronic structure changing process with interlayer spacing of MoS2-WS2, MoS2-WSe2, and WS2-WSe2 is different from each other. With the help of variable-temperature spectral experiment, different electronic transition properties of MoS2-WS2, MoS2-WSe2, and WS2-WSe2 have been demonstrated. The transition transformation from indirect to direct can be only observed in the MoS2-WS2 heterostructure, as the valence band maximum (VBM) at the Γ point in the MoS2-WSe2 and WS2-WSe2 heterostructure is less sensitive to the interlayer spacing than those from the MoS2-WS2 heterostructure. The present work highlights the significance of the temperature tuning in interlayer coupling and advance the research of MoS2-WS2, MoS2-WSe2, and WS2-WSe2 based device applications.

  8. Low-temperature-dependent property in an avalanche photodiode based on GaN/AlN periodically-stacked structure

    NASA Astrophysics Data System (ADS)

    Zheng, Jiyuan; Wang, Lai; Yang, Di; Yu, Jiadong; Meng, Xiao; Hao, Zhibiao; Sun, Changzheng; Xiong, Bing; Luo, Yi; Han, Yanjun; Wang, Jian; Li, Hongtao; Li, Mo; Li, Qian

    2016-10-01

    In ultra-high sensitive APDs, a vibrate of temperature might bring a fatal decline of the multiplication performance. Conventional method to realize a temperature-stable APD focuses on the optimization of device structure, which has limited effects. While in this paper, a solution by reducing the carrier scattering rate based on an GaN/AlN periodically-stacked structure (PSS) APD is brought out to improve temperature stability essentially. Transport property is systematically investigated. Compared with conventional GaN homojunction (HJ) APDs, electron suffers much less phonon scatterings before it achieves ionization threshold energy and more electrons occupy high energy states in PSS APD. The temperature dependence of ionization coefficient and energy distribution is greatly reduced. As a result, temperature stability on gain is significantly improved when the ionization happens with high efficiency. The change of gain for GaN (10 nm)/AlN (10 nm) PSS APD from 300 K to 310 K is about 20% lower than that for HJ APD. Additionally, thicker period length is found favorable to ionization coefficient ratio but a bit harmful to temperature stability, while increasing the proportion of AlN at each period in a specific range is found favorable to both ionization coefficient ratio and temperature stability.

  9. Finding diversity for building one-day ahead Hydrological Ensemble Prediction System based on artificial neural network stacks

    NASA Astrophysics Data System (ADS)

    Brochero, Darwin; Anctil, Francois; Gagné, Christian; López, Karol

    2013-04-01

    In this study, we addressed the application of Artificial Neural Networks (ANN) in the context of Hydrological Ensemble Prediction Systems (HEPS). Such systems have become popular in the past years as a tool to include the forecast uncertainty in the decision making process. HEPS considers fundamentally the uncertainty cascade model [4] for uncertainty representation. Analogously, the machine learning community has proposed models of multiple classifier systems that take into account the variability in datasets, input space, model structures, and parametric configuration [3]. This approach is based primarily on the well-known "no free lunch theorem" [1]. Consequently, we propose a framework based on two separate but complementary topics: data stratification and input variable selection (IVS). Thus, we promote an ANN prediction stack in which each predictor is trained based on input spaces defined by the IVS application on different stratified sub-samples. All this, added to the inherent variability of classical ANN optimization, leads us to our ultimate goal: diversity in the prediction, defined as the complementarity of the individual predictors. The stratification application on the 12 basins used in this study, which originate from the second and third workshop of the MOPEX project [2], shows that the informativeness of the data is far more important than the quantity used for ANN training. Additionally, the input space variability leads to ANN stacks that outperform an ANN stack model trained with 100% of the available information but with a random selection of dataset used in the early stopping method (scenario R100P). The results show that from a deterministic view, the main advantage focuses on the efficient selection of the training information, which is an equally important concept for the calibration of conceptual hydrological models. On the other hand, the diversity achieved is reflected in a substantial improvement in the scores that define the

  10. Contribution of partial charge interactions and base stacking to the efficiency of primer extension at and beyond abasic sites in DNA.

    PubMed

    Xia, Shuangluo; Vashishtha, Ashwani; Bulkley, David; Eom, Soo Hyun; Wang, Jimin; Konigsberg, William H

    2012-06-19

    During DNA synthesis, base stacking and Watson-Crick (WC) hydrogen bonding increase the stability of nascent base pairs when they are in a ternary complex. To evaluate the contribution of base stacking to the incorporation efficiency of dNTPs when a DNA polymerase encounters an abasic site, we varied the penultimate base pairs (PBs) adjacent to the abasic site using all 16 possible combinations. We then determined pre-steady-state kinetic parameters with an RB69 DNA polymerase variant and solved nine structures of the corresponding ternary complexes. The efficiency of incorporation for incoming dNTPs opposite an abasic site varied between 2- and 210-fold depending on the identity of the PB. We propose that the A rule can be extended to encompass the fact that DNA polymerase can bypass dA/abasic sites more efficiently than other dN/abasic sites. Crystal structures of the ternary complexes show that the surface of the incoming base was stacked against the PB's interface and that the kinetic parameters for dNMP incorporation were consistent with specific features of base stacking, such as surface area and partial charge-charge interactions between the incoming base and the PB. Without a templating nucleotide residue, an incoming dNTP has no base with which it can hydrogen bond and cannot be desolvated, so that these surrounding water molecules become ordered and remain on the PB's surface in the ternary complex. When these water molecules are on top of a hydrophobic patch on the PB, they destabilize the ternary complex, and the incorporation efficiency of incoming dNTPs is reduced.

  11. Contribution of Partial Charge Interactions and Base Stacking to the Efficiency of Primer Extension at and beyond Abasic Sites in DNA

    SciTech Connect

    Xia, Shuangluo; Vashishtha, Ashwani; Bulkley, David; Eom, Soo Hyun; Wang, Jimin; Konigsberg, William H.

    2012-08-31

    During DNA synthesis, base stacking and Watson-Crick (WC) hydrogen bonding increase the stability of nascent base pairs when they are in a ternary complex. To evaluate the contribution of base stacking to the incorporation efficiency of dNTPs when a DNA polymerase encounters an abasic site, we varied the penultimate base pairs (PBs) adjacent to the abasic site using all 16 possible combinations. We then determined pre-steady-state kinetic parameters with an RB69 DNA polymerase variant and solved nine structures of the corresponding ternary complexes. The efficiency of incorporation for incoming dNTPs opposite an abasic site varied between 2- and 210-fold depending on the identity of the PB. We propose that the A rule can be extended to encompass the fact that DNA polymerase can bypass dA/abasic sites more efficiently than other dN/abasic sites. Crystal structures of the ternary complexes show that the surface of the incoming base was stacked against the PB's interface and that the kinetic parameters for dNMP incorporation were consistent with specific features of base stacking, such as surface area and partial charge-charge interactions between the incoming base and the PB. Without a templating nucleotide residue, an incoming dNTP has no base with which it can hydrogen bond and cannot be desolvated, so that these surrounding water molecules become ordered and remain on the PB's surface in the ternary complex. When these water molecules are on top of a hydrophobic patch on the PB, they destabilize the ternary complex, and the incorporation efficiency of incoming dNTPs is reduced.

  12. A low-temperature fabricated gate-stack structure for Ge-based MOSFET with ferromagnetic epitaxial Heusler-alloy/Ge electrodes

    NASA Astrophysics Data System (ADS)

    Fujita, Yuichi; Yamada, Michihiro; Nagatomi, Yuta; Yamamoto, Keisuke; Yamada, Shinya; Sawano, Kentarou; Kanashima, Takeshi; Nakashima, Hiroshi; Hamaya, Kohei

    2016-06-01

    A possible low-temperature fabrication process of a gate-stack for Ge-based spin metal-oxide-semiconductor field-effect transistor (MOSFET) is investigated. First, since we use epitaxial ferromagnetic Heusler alloys on top of the phosphorous doped Ge epilayer as spin injector and detector, we need a dry etching process to form Heusler-alloy/n+-Ge Schottky-tunnel contacts. Next, to remove the Ge epilayers damaged by the dry etching process, the fabricated structures are dipped in a 0.03% diluted H2O2 solution. Finally, Al/SiO2/GeO2/Ge gate-stack structures are fabricated at 300 °C as a top gate-stack structure. As a result, the currents in the Ge-MOSFET fabricated here can be modulated by applying gate voltages even by using the low-temperature formed gate-stack structures. This low-temperature fabrication process can be utilized for operating Ge spin MOSFETs with a top gate electrode.

  13. Stacking with stochastic cooling

    NASA Astrophysics Data System (ADS)

    Caspers, Fritz; Möhl, Dieter

    2004-10-01

    Accumulation of large stacks of antiprotons or ions with the aid of stochastic cooling is more delicate than cooling a constant intensity beam. Basically the difficulty stems from the fact that the optimized gain and the cooling rate are inversely proportional to the number of particles 'seen' by the cooling system. Therefore, to maintain fast stacking, the newly injected batch has to be strongly 'protected' from the Schottky noise of the stack. Vice versa the stack has to be efficiently 'shielded' against the high gain cooling system for the injected beam. In the antiproton accumulators with stacking ratios up to 105 the problem is solved by radial separation of the injection and the stack orbits in a region of large dispersion. An array of several tapered cooling systems with a matched gain profile provides a continuous particle flux towards the high-density stack core. Shielding of the different systems from each other is obtained both through the spatial separation and via the revolution frequencies (filters). In the 'old AA', where the antiproton collection and stacking was done in one single ring, the injected beam was further shielded during cooling by means of a movable shutter. The complexity of these systems is very high. For more modest stacking ratios, one might use azimuthal rather than radial separation of stack and injected beam. Schematically half of the circumference would be used to accept and cool new beam and the remainder to house the stack. Fast gating is then required between the high gain cooling of the injected beam and the low gain stack cooling. RF-gymnastics are used to merge the pre-cooled batch with the stack, to re-create free space for the next injection, and to capture the new batch. This scheme is less demanding for the storage ring lattice, but at the expense of some reduction in stacking rate. The talk reviews the 'radial' separation schemes and also gives some considerations to the 'azimuthal' schemes.

  14. Ultra-dark graphene stack metamaterials

    NASA Astrophysics Data System (ADS)

    Chugh, Sunny; Man, Mengren; Chen, Zhihong; Webb, Kevin J.

    2015-02-01

    We present a fabrication method to achieve a graphene stack metamaterial, a periodic array of unit cells composed of graphene and a thin insulating spacer, that allows accumulation of the strong absorption from individual graphene sheets and low reflectivity from the stack. The complex sheet conductivity of graphene from experimental data models the measured power transmitted as a function of wavelength and number of periods in the stack. Simulated results based on the extracted graphene complex sheet conductivity for thicker stacks suggest that the graphene stack reflectivity and the per-unit-length absorption can be controlled to exceed the performance of competing light absorbers. Furthermore, the electrical properties of graphene coupled with the stack absorption characteristics provide for applications in optoelectronic devices.

  15. Photoresponse of double-stacked graphene to Infrared radiation.

    PubMed

    Gowda, Prarthana; Mohapatra, Dipti R; Misra, Abha

    2015-10-14

    We report the photoresponse of stacked graphene layers towards infrared radiation. Graphene is stacked in two configurations, namely, crossed and parallel layers. Raman analysis demonstrated a strong interaction among the stacked graphene layers. Graphene in the crossed configuration exhibited the presence of both negative and positive conductivities; however, other configurations of graphene exhibited positive conductivity only. The presence of negative photoconductivity is proposed to be due to oxygen or oxygen-related functional group absorbents that are trapped in between two monolayers of graphene and act as scattering centers for free carriers. An interesting trend is reported in differential conductivity when stacked layers are compared with multilayers and parallel-stacked graphene layers.

  16. Photoresponse of double-stacked graphene to Infrared radiation

    NASA Astrophysics Data System (ADS)

    Gowda, Prarthana; Mohapatra, Dipti R.; Misra, Abha

    2015-09-01

    We report the photoresponse of stacked graphene layers towards infrared radiation. Graphene is stacked in two configurations, namely, crossed and parallel layers. Raman analysis demonstrated a strong interaction among the stacked graphene layers. Graphene in the crossed configuration exhibited the presence of both negative and positive conductivities; however, other configurations of graphene exhibited positive conductivity only. The presence of negative photoconductivity is proposed to be due to oxygen or oxygen-related functional group absorbents that are trapped in between two monolayers of graphene and act as scattering centers for free carriers. An interesting trend is reported in differential conductivity when stacked layers are compared with multilayers and parallel-stacked graphene layers.

  17. Design and finite element analysis of a new stack ultrasonic motor based on in-plane mode

    NASA Astrophysics Data System (ADS)

    Xiaoyan, Hou; Heow Pueh, Lee; Jin, Ong Chong; Siak Piang, Lim

    2012-11-01

    This paper presents a novel piezoelectric ultrasonic motor which is able to exert the strong actuating power of piezoelectric stacks. It is a linear standing wave motor with simple structure and high positioning speed. Elliptical motion at the driving point is achieved by simultaneously matching the natural frequencies of two operating modes of the device. The matched resonance is taken to be the operating frequency at which both modes can be excited. A prototype motor is developed and numerically analyzed. Vibration characteristics of the motor, such as mode shapes, natural frequencies, output displacement in frequency and time domains, electrical impedance of the stacks and trajectories of the driving point, are obtained from finite element analysis. The results confirm that the motor has high electromechanical efficiency with good mechanical output characteristics.

  18. High performance of silicon nanowire-based biosensors using a high-k stacked sensing thin film.

    PubMed

    Bae, Tae-Eon; Jang, Hyun-June; Yang, Jong-Heon; Cho, Won-Ju

    2013-06-12

    High performance silicon nanowire (SiNW) sensors with SiO2/HfO2/Al2O3 (OHA) engineered sensing thin films were fabricated. A lower interface state density, a larger capacitance and a stronger chemical immunity, which are essential for enhancing the performance of devices, were accomplished by stacking thin SiO2, HfO2, and Al2O3 layers, respectively, in sequence on the SiNW channel. Compared with the conventional single SiO2 thin film, the staked OHA thin films demonstrated improved sensing performances; a higher sensitivity, a lower hysteresis voltage, and a smaller drift rate, as well as a higher output current. Therefore, the SiNW sensors with OHA stacked sensing thin films are very promising to biological and chemical sensor applications.

  19. To Differentiate or Not to Differentiate? Using Internet-Based Technology in the Classroom

    ERIC Educational Resources Information Center

    Cobb, Aries

    2010-01-01

    In the targeted school in the Cleveland Metropolitan School District, teachers focus on differentiating instruction with technology-based software. Differentiated instruction is the chosen teaching strategy over direct instruction because students and teachers alike prefer to work in cooperative groups while using technology in the classroom.…

  20. Semiempirical model based on thermodynamic principles for determining 6 kW proton exchange membrane electrolyzer stack characteristics

    NASA Astrophysics Data System (ADS)

    Dale, N. V.; Mann, M. D.; Salehfar, H.

    The performance of a 6 kW proton exchange membrane (PEM) electrolyzer was modeled using a semiempirical equation. Total cell voltage was represented as a sum of the Nernst voltage, activation overpotential and ohmic overpotential. A temperature and pressure dependent Nernst potential, derived from thermodynamic principles, was used to model the 20 cell PEM electrolyzer stack. The importance of including the temperature dependence of various model components is clearly demonstrated. The reversible potential without the pressure effect decreases with increasing temperature in a linear fashion. The exchange current densities at both the electrodes and the membrane conductivity were the coefficients of the semiempirical equation. An experimental system designed around a 6 kW PEM electrolyzer was used to obtain the current-voltage characteristics at different stack temperatures. A nonlinear curve fitting method was employed to determine the equation coefficients from the experimental current-voltage characteristics. The modeling results showed an increase in the anode and cathode exchange current densities with increasing electrolyzer stack temperature. The membrane conductivity was also increased with increasing temperature and was modeled as a function of temperature. The electrolyzer energy efficiencies at different temperatures were evaluated using temperature dependent higher heating value voltages instead of a fixed value of 1.48 V.

  1. Stack Trace Analysis Tool

    SciTech Connect

    2013-02-19

    STAT is a light weight debugging tool that gathers and merges stack traces from all of the processes in a parallell application. STAT uses the MRNet tree based overlay network to broadcast commands from the tool front-end to the STAT daemons and for the front-end to gather the traces from the STAT daemons. As the traces propagate through the MRNet network tree, they are merged across all tasks to from a single call prefix tree. The call prefix tree can be examined to identify tasks with similar function call patterns and to delineate a small set of equivalence slasses. A representative task from each of these classes can then be fed into a full feature debugger like TotalView for root cause analysis.

  2. Stack gas treatment

    DOEpatents

    Reeves, Adam A.

    1977-04-12

    Hot stack gases transfer contained heat to a gravity flow of pebbles treated with a catalyst, cooled stacked gases and a sulfuric acid mist is withdrawn from the unit, and heat picked up by the pebbles is transferred to air for combustion or other process. The sulfuric acid (or sulfur, depending on the catalyst) is withdrawn in a recovery unit.

  3. Co-based alloys design based on first-principles calculations: Influence of transition metal and rare-earth alloying element on stacking fault energy

    NASA Astrophysics Data System (ADS)

    Achmad, Tria Laksana; Fu, Wenxiang; Chen, Hao; Zhang, Chi; Yang, Zhi-Gang

    2017-01-01

    The main idea of alloy design is to reduce costs and time required by the traditional (trial and error) method, then finding a new way to develop the efficiency of the alloy design is necessary. In this study, we proposed a new approach to the design of Co-based alloys. It is based on the concept that lowering the ratio of stable and unstable stacking fault energy (SFE) could bring a significant increase in the tendency of partial dislocation accumulation and FCC to HCP phase transformation then enhance mechanical properties. Through the advance development of the computing techniques, first-principles density-functional-theory (DFT) calculations are capable of providing highly accurate structural modeling at the atomic scale without any experimental data. The first-principles calculated results show that the addition of some transition metal (Cr, Mo, W, Re, Os, Ir) and rare-earth (Sc, Y, La, Sm) alloying elements would decrease both stable and unstable SFE of pure Co. The dominant deformation mechanism of binary Co-4.5 at.% X (X = alloying element) is extended partial dislocation. Our study reveals Re, W, Mo and La as the most promising alloying additions for the Co-based alloys design with superior performances. Furthermore, the underlying mechanisms for the SFE reduction can be explained regarding the electronic structure.

  4. Segregation at stacking faults within the γ′ phase of two Ni-base superalloys following intermediate temperature creep

    SciTech Connect

    Viswanathan, G. B.; Shi, R.; Genc, A.; Vorontsov, V. A.; Kovarik, L.; Rae, C. M. F.; Mills, M. J.

    2015-01-01

    Using state-of-the-art energy dispersive spectroscopy, it has been established for the first time that there exists significant compositional variation (enrichment of Co and Cr and deficiency of Ni and Al) associated with superlattice intrinsic stacking faults created in the ordered γ' precipitates following intermediate temperature deformation of two commercial superalloys. The results indicate that long range diffusion of these elements is intimately involved in the precipitate shearing process and is therefore closely linked to the time-dependent deformation of the alloys.

  5. Flexible, Stretchable, and Rechargeable Fiber-Shaped Zinc-Air Battery Based on Cross-Stacked Carbon Nanotube Sheets.

    PubMed

    Xu, Yifan; Zhang, Ye; Guo, Ziyang; Ren, Jing; Wang, Yonggang; Peng, Huisheng

    2015-12-14

    The fabrication of flexible, stretchable and rechargeable devices with a high energy density is critical for next-generation electronics. Herein, fiber-shaped Zn-air batteries, are realized for the first time by designing aligned, cross-stacked and porous carbon nanotube sheets simultaneously that behave as a gas diffusion layer, a catalyst layer, and a current collector. The combined remarkable electronic and mechanical properties of the aligned carbon nanotube sheets endow good electrochemical properties. They display excellent discharge and charge performances at a high current density of 2 A g(-1) . They are also flexible and stretchable, which is particularly promising to power portable and wearable electronic devices.

  6. Continuous angle steering of an optically- controlled phased array antenna based on differential true time delay constituted by micro-optical components.

    PubMed

    Wang, Jian; Hou, Peipei; Cai, Haiwen; Sun, Jianfeng; Wang, Shunan; Wang, Lijuan; Yang, Fei

    2015-04-06

    We propose an optically controlled phased array antenna (PAA) based on differential true time delay constructed optical beamforming network (OBFN). Differential true time delay is realized by stack integrated micro-optical components. Optically-controlled angle steering of radio frequency (RF) beams are realized and demonstrated by this configuration. Experimental results demonstrate that OBFN based PAA can accomplish RF-independent broadband beam steering without beam squint effect and can achieve continuous angle steering. In addition, multi-beams for different steering angles are acquired synchronously.

  7. The role of the substrate on the dispersion in accumulation in III-V compound semiconductor based metal-oxide-semiconductor gate stacks

    SciTech Connect

    Krylov, Igor; Ritter, Dan; Eizenberg, Moshe

    2015-09-07

    Dispersion in accumulation is a widely observed phenomenon in metal-oxide-semiconductor gate stacks based on III-V compound semiconductors. The physical origin of this phenomenon is attributed to border traps located in the dielectric material adjacent to the semiconductor. Here, we study the role of the semiconductor substrate on the electrical quality of the first layers at atomic layer deposited (ALD) dielectrics. For this purpose, either Al{sub 2}O{sub 3} or HfO{sub 2} dielectrics with variable thicknesses were deposited simultaneously on two technology important semiconductors—InGaAs and InP. Significantly larger dispersion was observed in InP based gate stacks compared to those based on InGaAs. The observed difference is attributed to a higher border trap density in dielectrics deposited on InP compared to those deposited on InGaAs. We therefore conclude that the substrate plays an important role in the determination of the electrical quality of the first dielectric monolayers deposited by ALD. An additional observation is that larger dispersion was obtained in HfO{sub 2} based capacitors compared to Al{sub 2}O{sub 3} based capacitors, deposited on the same semiconductor. This phenomenon is attributed to the lower conduction band offset rather than to a higher border trap density.

  8. On the spline-based wavelet differentiation matrix

    NASA Technical Reports Server (NTRS)

    Jameson, Leland

    1993-01-01

    The differentiation matrix for a spline-based wavelet basis is constructed. Given an n-th order spline basis it is proved that the differentiation matrix is accurate of order 2n + 2 when periodic boundary conditions are assumed. This high accuracy, or superconvergence, is lost when the boundary conditions are no longer periodic. Furthermore, it is shown that spline-based bases generate a class of compact finite difference schemes.

  9. Trajectory optimization based on differential inclusion

    NASA Technical Reports Server (NTRS)

    Seywald, Hans

    1993-01-01

    A method for generating finite-dimensional approximations to the solutions of optimal control problems is introduced. By employing a description of the dynamical system in terms of its attainable sets in favor of using differential equations, the controls are completely eliminated from the system model. Besides reducing the dimensionality of the discretized problem compared to state-of-the-art collocation methods, this approach also alleviates the search for initial guesses from where standard gradient search methods are able to converge. The mechanics of the new method are illustrated on a simple double integrator problem. The performance of the new algorithm is demonstrated on a 1-D rocket ascent problem ('Goddard Problem') in presence of a dynamic pressure constraint.

  10. PAM stack test utility

    SciTech Connect

    Grondona, Mark A.

    2007-08-22

    The pamtest utility calls the normal PAM hooks using a service and username supplied on the command line. This allows an administratory to test any one of many configured PAM stacks as any existing user on the machine.

  11. Computationally efficient modeling of the dynamic behavior of a portable PEM fuel cell stack

    NASA Astrophysics Data System (ADS)

    Philipps, S. P.; Ziegler, C.

    A numerically efficient mathematical model of a proton exchange membrane fuel cell (PEMFC) stack is presented. The aim of this model is to study the dynamic response of a PEMFC stack subjected to load changes under the restriction of short computing time. This restriction was imposed in order for the model to be applicable for nonlinear model predictive control (NMPC). The dynamic, non-isothermal model is based on mass and energy balance equations, which are reduced to ordinary differential equations in time. The reduced equations are solved for a single cell and the results are upscaled to describe the fuel cell stack. This approach makes our calculations computationally efficient. We study the feasibility of capturing water balance effects with such a reduced model. Mass balance equations for water vapor and liquid water including the phase change as well as a steady-state membrane model accounting for the electro-osmotic drag and diffusion of water through the membrane are included. Based on this approach the model is successfully used to predict critical operating conditions by monitoring the amount of liquid water in the stack and the stack impedance. The model and the overall calculation method are validated using two different load profiles on realistic time scales of up to 30 min. The simulation results are used to clarify the measured characteristics of the stack temperature and the stack voltage, which has rarely been done on such long time scales. In addition, a discussion of the influence of flooding and dry-out on the stack voltage is included. The modeling approach proves to be computationally efficient: an operating time of 0.5 h is simulated in less than 1 s, while still showing sufficient accuracy.

  12. Stacked Buoyant Payload Launcher

    DTIC Science & Technology

    2013-05-14

    reserved for undersea launched missiles. Underwater deployment of smaller payloads has been limited to ejection from torpedo tubes, the trash disposal...COVERED 00-00-2014 to 00-00-2014 4. TITLE AND SUBTITLE Stacked Buoyant Payload Launcher 5a. CONTRACT NUMBER 5b. GRANT NUMBER 5c. PROGRAM...1 of 11 STACKED BUOYANT PAYLOAD LAUNCHER STATEMENT OF GOVERNMENT INTEREST [0001] The invention described herein may be manufactured and

  13. Dynamic behaviour of SOFC short stacks

    NASA Astrophysics Data System (ADS)

    Molinelli, Michele; Larrain, Diego; Autissier, Nordahl; Ihringer, Raphaël; Sfeir, Joseph; Badel, Nicolas; Bucheli, Olivier; Van herle, Jan

    Electrical output behaviour obtained on solid oxide fuel cell stacks, based on planar anode supported cells (50 or 100 cm 2 active area) and metallic interconnects, is reported. Stacks (1-12 cells) have been operated with cathode air and anode hydrogen flows between 750 and 800 °C operating temperature. At first polarisation, an activation phase (increase in power density) is typically observed, ascribed to the cathode but not clarified. Activation may extend over days or weeks. The materials are fairly resistant to thermal cycling. A 1-cell stack cycled five times in 4 days at heating/cooling rates of 100-300 K h -1, showed no accelerated degradation. In a 5-cell stack, open circuit voltage (OCV) of all cells remained constant after three full cycles (800-25 °C). Power output is little affected by air flow but markedly influenced by small fuel flow variation. Fuel utilisation reached 88% in one 5-cell stack test. Performance homogeneity between cells lay at ±4-8% for three different 5- or 6-cell stacks, but was poor for a 12-cell stack with respect to the border cells. Degradation of a 1-cell stack operated for 5500 h showed clear dependence on operating conditions (cell voltage, fuel conversion), believed to be related to anode reoxidation (Ni). A 6-cell stack (50 cm 2 cells) delivering 100 W el at 790 °C (1 kW el L -1 or 0.34 W cm -2) went through a fuel supply interruption and a thermal cycle, with one out of the six cells slightly underperforming after these events. This cell was eventually responsible (hot spot) for stack failure.

  14. Preserving Differential Privacy in Degree-Correlation based Graph Generation.

    PubMed

    Wang, Yue; Wu, Xintao

    2013-08-01

    Enabling accurate analysis of social network data while preserving differential privacy has been challenging since graph features such as cluster coefficient often have high sensitivity, which is different from traditional aggregate functions (e.g., count and sum) on tabular data. In this paper, we study the problem of enforcing edge differential privacy in graph generation. The idea is to enforce differential privacy on graph model parameters learned from the original network and then generate the graphs for releasing using the graph model with the private parameters. In particular, we develop a differential privacy preserving graph generator based on the dK-graph generation model. We first derive from the original graph various parameters (i.e., degree correlations) used in the dK-graph model, then enforce edge differential privacy on the learned parameters, and finally use the dK-graph model with the perturbed parameters to generate graphs. For the 2K-graph model, we enforce the edge differential privacy by calibrating noise based on the smooth sensitivity, rather than the global sensitivity. By doing this, we achieve the strict differential privacy guarantee with smaller magnitude noise. We conduct experiments on four real networks and compare the performance of our private dK-graph models with the stochastic Kronecker graph generation model in terms of utility and privacy tradeoff. Empirical evaluations show the developed private dK-graph generation models significantly outperform the approach based on the stochastic Kronecker generation model.

  15. Preserving Differential Privacy in Degree-Correlation based Graph Generation

    PubMed Central

    Wang, Yue; Wu, Xintao

    2014-01-01

    Enabling accurate analysis of social network data while preserving differential privacy has been challenging since graph features such as cluster coefficient often have high sensitivity, which is different from traditional aggregate functions (e.g., count and sum) on tabular data. In this paper, we study the problem of enforcing edge differential privacy in graph generation. The idea is to enforce differential privacy on graph model parameters learned from the original network and then generate the graphs for releasing using the graph model with the private parameters. In particular, we develop a differential privacy preserving graph generator based on the dK-graph generation model. We first derive from the original graph various parameters (i.e., degree correlations) used in the dK-graph model, then enforce edge differential privacy on the learned parameters, and finally use the dK-graph model with the perturbed parameters to generate graphs. For the 2K-graph model, we enforce the edge differential privacy by calibrating noise based on the smooth sensitivity, rather than the global sensitivity. By doing this, we achieve the strict differential privacy guarantee with smaller magnitude noise. We conduct experiments on four real networks and compare the performance of our private dK-graph models with the stochastic Kronecker graph generation model in terms of utility and privacy tradeoff. Empirical evaluations show the developed private dK-graph generation models significantly outperform the approach based on the stochastic Kronecker generation model. PMID:24723987

  16. Structural context effects in the oxidation of 8-oxo-7,8-dihydro-2'-deoxyguanosine to hydantoin products: electrostatics, base stacking, and base pairing.

    PubMed

    Fleming, Aaron M; Muller, James G; Dlouhy, Adrienne C; Burrows, Cynthia J

    2012-09-12

    8-Oxo-7,8-dihydroguanine (OG) is the most common base damage found in cells, where it resides in many structural contexts, including the nucleotide pool, single-stranded DNA at transcription forks and replication bubbles, and duplex DNA base-paired with either adenine (A) or cytosine (C). OG is prone to further oxidation to the highly mutagenic hydantoin products spiroiminodihydantoin (Sp) and 5-guanidinohydantoin (Gh) in a sharply pH-dependent fashion within nucleosides. In the present work, studies were conducted to determine how the structural context affects OG oxidation to the hydantoins. These studies revealed a trend in which the Sp yield was greatest in unencumbered contexts, such as nucleosides, while the Gh yield increased in oligodeoxynucleotide (ODN) contexts or at reduced pH. Oxidation of oligomers containing hydrogen-bond modulators (2,6-diaminopurine, N(4)-ethylcytidine) or alteration of the reaction conditions (pH, temperature, and salt) identify base stacking, electrostatics, and base pairing as the drivers of the key intermediate 5-hydroxy-8-oxo-7,8-dihydroguanine (5-HO-OG) partitioning along the two hydantoin pathways, allowing us to propose a mechanism for the observed base-pairing effects. Moreover, these structural effects cause an increase in the effective pK(a) of 5-HO-OG, following an increasing trend from 5.7 in nucleosides to 7.7 in a duplex bearing an OG·C base pair, which supports the context-dependent product yields. The high yield of Gh in ODNs underscores the importance of further study on this lesion. The structural context of OG also determined its relative reactivity toward oxidation, for which the OG·A base pair is ~2.5-fold more reactive than an OG·C base pair, and with the weak one-electron oxidant ferricyanide, the OG nucleoside reactivity is >6000-fold greater than that of OG·C in a duplex, leading to the conclusion that OG in the nucleoside pool should act as a protective agent for OG in the genome.

  17. The electronic structure of the four nucleotide bases in DNA, of their stacks, and of their homopolynucleotides in the absence and presence of water

    NASA Astrophysics Data System (ADS)

    Ladik, János; Bende, Attila; Bogár, Ferenc

    2008-03-01

    Using the ab initio Hartree-Fock crystal orbital method in its linear combination of atomic orbital form, the energy band structure of the four homo-DNA-base stacks and those of poly(adenilic acid), polythymidine, and polycytidine were calculated both in the absence and presence of their surrounding water molecules. For these computations Clementi's double ζ basis set was applied. To facilitate the interpretation of the results, the calculations were supplemented by the calculations of the six narrow bands above the conduction band of poly(guanilic acid) with water. Further, the sugar-phosphate chain as well as the water structures around poly(adenilic acid) and polythymidine, respectively, were computed. Three important features have emerged from these calculations. (1) The nonbase-type or water-type bands in the fundamental gap are all close to the corresponding conduction bands. (2) The very broad conduction band (1.70eV) of the guanine stack is split off to seven narrow bands in the case of poly(guanilic acid) (both without and with water) showing that in the energy range of the originally guanine-stack-type conduction band, states belonging to the sugar, to PO4-, to Na+, and to water mix with the guanine-type states. (3) It is apparent that at the homopolynucleotides with water in three cases the valence bands are very similar (polycytidine, because it has a very narrow valence band, does not fall into this category). We have supplemented these calculations by the computation of correlation effects on the band structures of the base stacks by solving the inverse Dyson equation in its diagonal approximation taken for the self-energy the MP2 many body perturbation theory expression. In all cases the too large fundamental gap decreased by 2-3eV. In most cases the widths of the valence and conduction bands, respectively, decreased (but not in all cases). This unusual behavior is most probably due to the rather large complexity of the systems. From all this

  18. PRECISION COSMOGRAPHY WITH STACKED VOIDS

    SciTech Connect

    Lavaux, Guilhem; Wandelt, Benjamin D.

    2012-08-01

    We present a purely geometrical method for probing the expansion history of the universe from the observation of the shape of stacked voids in spectroscopic redshift surveys. Our method is an Alcock-Paczynski (AP) test based on the average sphericity of voids posited on the local isotropy of the universe. It works by comparing the temporal extent of cosmic voids along the line of sight with their angular, spatial extent. We describe the algorithm that we use to detect and stack voids in redshift shells on the light cone and test it on mock light cones produced from N-body simulations. We establish a robust statistical model for estimating the average stretching of voids in redshift space and quantify the contamination by peculiar velocities. Finally, assuming that the void statistics that we derive from N-body simulations is preserved when considering galaxy surveys, we assess the capability of this approach to constrain dark energy parameters. We report this assessment in terms of the figure of merit (FoM) of the dark energy task force and in particular of the proposed Euclid mission which is particularly suited for this technique since it is a spectroscopic survey. The FoM due to stacked voids from the Euclid wide survey may double that of all other dark energy probes derived from Euclid data alone (combined with Planck priors). In particular, voids seem to outperform baryon acoustic oscillations by an order of magnitude. This result is consistent with simple estimates based on mode counting. The AP test based on stacked voids may be a significant addition to the portfolio of major dark energy probes and its potentialities must be studied in detail.

  19. Differential titration of bases in glacial acetic acid.

    PubMed

    Castellano, T; Medwick, T; Shinkai, J H; Bailey, L

    1981-01-01

    A study of bases in acetic acid and their differential titration was carried out. The overall basicity constants for 20 bases were measured in acetic acid, and the differential titration of five binary mixtures of variable delta pKb values in acetic acid was followed using a glass electrode-modified calomel electrode system. Agreement with literature values was good. A leveling diagram was constructed that indicated that bases stronger than aqueous pKb 10 are leveled to an acetous pKb 5.69, whereas weaker bases are not leveled but instead exhibit their own intrinsic basicity, with the acetous pKb to aqueous pKb values being linearly related (slope 1.18, correlation coefficient 0.962). A minimum acetous delta pKb of four units is required for the satisfactory differential titration of two bases in acetic acid.

  20. Differential Regulatory Analysis Based on Coexpression Network in Cancer Research.

    PubMed

    Li, Junyi; Li, Yi-Xue; Li, Yuan-Yuan

    2016-01-01

    With rapid development of high-throughput techniques and accumulation of big transcriptomic data, plenty of computational methods and algorithms such as differential analysis and network analysis have been proposed to explore genome-wide gene expression characteristics. These efforts are aiming to transform underlying genomic information into valuable knowledges in biological and medical research fields. Recently, tremendous integrative research methods are dedicated to interpret the development and progress of neoplastic diseases, whereas differential regulatory analysis (DRA) based on gene coexpression network (GCN) increasingly plays a robust complement to regular differential expression analysis in revealing regulatory functions of cancer related genes such as evading growth suppressors and resisting cell death. Differential regulatory analysis based on GCN is prospective and shows its essential role in discovering the system properties of carcinogenesis features. Here we briefly review the paradigm of differential regulatory analysis based on GCN. We also focus on the applications of differential regulatory analysis based on GCN in cancer research and point out that DRA is necessary and extraordinary to reveal underlying molecular mechanism in large-scale carcinogenesis studies.

  1. High Volumetric Energy Density Asymmetric Supercapacitors Based on Well-Balanced Graphene and Graphene-MnO2 Electrodes with Densely Stacked Architectures.

    PubMed

    Sheng, Lizhi; Jiang, Lili; Wei, Tong; Fan, Zhuangjun

    2016-10-01

    The well-matched electrochemical parameters of positive and negative electrodes, such as specific capacitance, rate performance, and cycling stability, are important for obtaining high-performance asymmetric supercapacitors. Herein, a facile and cost-effective strategy is demonstrated for the fabrication of 3D densely stacked graphene (DSG) and graphene-MnO2 (G-MnO2 ) architectures as the electrode materials for asymmetric supercapacitors (ASCs) by using MnO2 -intercalated graphite oxide (GO-MnO2 ) as the precursor. DSG has a stacked graphene structure with continuous ion transport network in-between the sheets, resulting in a high volumetric capacitance of 366 F cm(-3) , almost 2.5 times than that of reduced graphene oxide, as well as long cycle life (93% capacitance retention after 10 000 cycles). More importantly, almost similar electrochemical properties, such as specific capacitance, rate performance, and cycling stability, are obtained for DSG as the negative electrode and G-MnO2 as the positive electrode. As a result, the assembled ASC delivers both ultrahigh gravimetric and volumetric energy densities of 62.4 Wh kg(-1) and 54.4 Wh L(-1) (based on total volume of two electrodes) in 1 m Na2 SO4 aqueous electrolyte, respectively, much higher than most of previously reported ASCs in aqueous electrolytes.

  2. Synergetic effect of efficient energy transfer and 3D pi-pi stack for white emission based on the block copolymers containing nonconjugated spacer.

    PubMed

    Lu, Junjian; Li, Hui; Yao, Bing; Zhao, Bin; Weng, Chao; Lei, Gangtie; Shen, Ping; Xie, Zhiyuan; Tan, Songting

    2009-04-02

    A series of block copolymers containing nonconjugated spacer and 3D pi-pi stacking structure with simultaneous blue-, green-, and yellow-emitting units has been synthesized and characterized. The dependence of the energy transfer and electroluminescence (EL) properties of these block copolymers on the contents of oligo(phenylenevinylene)s has been investigated. The block copolymer (GEO8-BEO-YEO4) with 98.8% blue-emitting oligomer (BEO), 0.8% green-emitting oligomer (GEO), and 0.4% yellow-emitting oligomer (YEO) showed the best electroluminescent performance, exhibiting a maximum luminance of 2309 cd/m(2) and efficiency of 0.34 cd/A. The single-layer-polymer light-emitting diodes device based on GEO2-BEO-YEO4 emitted greenish white light with the CIE coordinates of (0.26, 0.37) at 10 V. The synergetic effect of the efficient energy transfer and 3D pi-pi stack of these block copolymers on the photoluminescent and electroluminescent properties are investigated.

  3. Towards functional 3D-stacked electrospun composite scaffolds of PHBV, silk fibroin and nanohydroxyapatite: Mechanical properties and surface osteogenic differentiation.

    PubMed

    Paşcu, Elena I; Cahill, Paul A; Stokes, Joseph; McGuinness, Garrett B

    2016-04-01

    Bone tissue engineering scaffolds have two challenging functional tasks to fulfil: to encourage cell proliferation, differentiation and matrix synthesis and to provide suitable mechanical stability upon implantation. Composites of biopolymers and bioceramics combine the advantages of both types of materials, resulting in better processability and enhanced mechanical and biological properties through matrix reinforcement. In the present study, novel thick bone composite scaffolds were successfully fabricated using electrospun flat sheets of polyhydroxybutyrate-polyhydroxyvalerate/nanohydroxyapatite/silk fibroin essence (2% nanohydroxyapatite - 2% silk fibroin essence and 5% nanohydroxyapatite - 5% silk fibroin essence, respectively). Their potential asin vitrobone regeneration scaffolds was evaluated using mouse calvarian osteoblast cells (MC3T3-E1), in terms of morphology (scanning electron microscope), cell attachment, cell proliferation, Col type I, osteopontin and bone alkaline phosphatase activity (Quantitative Real Time Polymerase Chain Reaction [qRT-PCR], enzyme-linked immunosorbent assay, immunocytochemistry). Electrospun polyhydroxybutyrate-polyhydroxyvalerate scaffolds were used as reference constructs. The results showed that the compressive and tensile mechanical properties of the scaffolds are dependent on the change in their composition, and the treatment these underwent. Furthermore, methanol-treated and autoclaved (MA) P2 (2% nanohydroxyapatite, 2% silk fibroin essence) samples appeared to exhibit more promising tensile properties. Additionally, the compressive tests results confirmed that the methanol pre-treatment and the autoclaving step lead to an increase in the P2 secant modulus when compared to the non-methanol-treated ones, P2 and P5 (5% nanohydroxyapatite, 5% silk fibroin essence), respectively.Both formulations of polyhydroxybutyrate-polyhydroxyvalerate/nanohydroxyapatite/silk fibroin essence composite promoted greater cell adhesion and

  4. Robust PCA based method for discovering differentially expressed genes.

    PubMed

    Liu, Jin-Xing; Wang, Yu-Tian; Zheng, Chun-Hou; Sha, Wen; Mi, Jian-Xun; Xu, Yong

    2013-01-01

    How to identify a set of genes that are relevant to a key biological process is an important issue in current molecular biology. In this paper, we propose a novel method to discover differentially expressed genes based on robust principal component analysis (RPCA). In our method, we treat the differentially and non-differentially expressed genes as perturbation signals S and low-rank matrix A, respectively. Perturbation signals S can be recovered from the gene expression data by using RPCA. To discover the differentially expressed genes associated with special biological progresses or functions, the scheme is given as follows. Firstly, the matrix D of expression data is decomposed into two adding matrices A and S by using RPCA. Secondly, the differentially expressed genes are identified based on matrix S. Finally, the differentially expressed genes are evaluated by the tools based on Gene Ontology. A larger number of experiments on hypothetical and real gene expression data are also provided and the experimental results show that our method is efficient and effective.

  5. Stack filter classifiers

    SciTech Connect

    Porter, Reid B; Hush, Don

    2009-01-01

    Just as linear models generalize the sample mean and weighted average, weighted order statistic models generalize the sample median and weighted median. This analogy can be continued informally to generalized additive modeels in the case of the mean, and Stack Filters in the case of the median. Both of these model classes have been extensively studied for signal and image processing but it is surprising to find that for pattern classification, their treatment has been significantly one sided. Generalized additive models are now a major tool in pattern classification and many different learning algorithms have been developed to fit model parameters to finite data. However Stack Filters remain largely confined to signal and image processing and learning algorithms for classification are yet to be seen. This paper is a step towards Stack Filter Classifiers and it shows that the approach is interesting from both a theoretical and a practical perspective.

  6. Stacked antiaromatic porphyrins

    PubMed Central

    Nozawa, Ryo; Tanaka, Hiroko; Cha, Won-Young; Hong, Yongseok; Hisaki, Ichiro; Shimizu, Soji; Shin, Ji-Young; Kowalczyk, Tim; Irle, Stephan; Kim, Dongho; Shinokubo, Hiroshi

    2016-01-01

    Aromaticity is a key concept in organic chemistry. Even though this concept has already been theoretically extrapolated to three dimensions, it usually still remains restricted to planar molecules in organic chemistry textbooks. Stacking of antiaromatic π-systems has been proposed to induce three-dimensional aromaticity as a result of strong frontier orbital interactions. However, experimental evidence to support this prediction still remains elusive so far. Here we report that close stacking of antiaromatic porphyrins diminishes their inherent antiaromaticity in the solid state as well as in solution. The antiaromatic stacking furthermore allows a delocalization of the π-electrons, which enhances the two-photon absorption cross-section values of the antiaromatic porphyrins. This feature enables the dynamic switching of the non-linear optical properties by controlling the arrangement of antiaromatic π-systems on the basis of intermolecular orbital interactions. PMID:27901014

  7. Stacked antiaromatic porphyrins

    NASA Astrophysics Data System (ADS)

    Nozawa, Ryo; Tanaka, Hiroko; Cha, Won-Young; Hong, Yongseok; Hisaki, Ichiro; Shimizu, Soji; Shin, Ji-Young; Kowalczyk, Tim; Irle, Stephan; Kim, Dongho; Shinokubo, Hiroshi

    2016-11-01

    Aromaticity is a key concept in organic chemistry. Even though this concept has already been theoretically extrapolated to three dimensions, it usually still remains restricted to planar molecules in organic chemistry textbooks. Stacking of antiaromatic π-systems has been proposed to induce three-dimensional aromaticity as a result of strong frontier orbital interactions. However, experimental evidence to support this prediction still remains elusive so far. Here we report that close stacking of antiaromatic porphyrins diminishes their inherent antiaromaticity in the solid state as well as in solution. The antiaromatic stacking furthermore allows a delocalization of the π-electrons, which enhances the two-photon absorption cross-section values of the antiaromatic porphyrins. This feature enables the dynamic switching of the non-linear optical properties by controlling the arrangement of antiaromatic π-systems on the basis of intermolecular orbital interactions.

  8. Laser pulse stacking method

    DOEpatents

    Moses, Edward I.

    1992-01-01

    A laser pulse stacking method is disclosed. A problem with the prior art has been the generation of a series of laser beam pulses where the outer and inner regions of the beams are generated so as to form radially non-synchronous pulses. Such pulses thus have a non-uniform cross-sectional area with respect to the outer and inner edges of the pulses. The present invention provides a solution by combining the temporally non-uniform pulses in a stacking effect to thus provide a more uniform temporal synchronism over the beam diameter.

  9. Laser pulse stacking method

    DOEpatents

    Moses, E.I.

    1992-12-01

    A laser pulse stacking method is disclosed. A problem with the prior art has been the generation of a series of laser beam pulses where the outer and inner regions of the beams are generated so as to form radially non-synchronous pulses. Such pulses thus have a non-uniform cross-sectional area with respect to the outer and inner edges of the pulses. The present invention provides a solution by combining the temporally non-uniform pulses in a stacking effect to thus provide a more uniform temporal synchronism over the beam diameter. 2 figs.

  10. A novel fractionized sampling and stacking strategy for online hyphenation of solid-phase-based extraction to ultra-high performance liquid chromatography for ultrasensitive analysis.

    PubMed

    Pan, Jialiang; Huang, Yichun; Liu, Li; Hu, Yuling; Li, Gongke

    2013-11-05

    We have developed a novel ultrasensitive online analytical system which integrated solid-phase-based extraction (SPBE) techniques with ultra-high performance liquid chromatography (UPLC) based on a fractionized sampling and stacking (FSS) strategy. FSS was proposed as a novel peak compression strategy to prevent band broadening and distortion caused by excessive solvents with high elution strength, which has been a main obstacle to conjunction of sample preparation techniques with UPLC. Such a strategy was based on online dividing a sample solution into fractions by plugs of weak mobile phase, followed by head-column stacking process, aiming to obtain a quite sharp sample zone. FSS enables UPLC to tolerate much larger injection volume of solvents with high elution strength, which facilitates hyphenation of SPBE with UPLC without peak distortion or loss of sensitivity. On the basis above, an online SPBE-UPLC system was realized by FSS, and its applicability was preliminarily verified by the successful development of a sensitive solid phase extraction-FSS-UPLC method for the determination of triazines. Subsequently an integrated online system incorporating molecularly imprinted in-tube solid phase microextraction, derivatization and FSS-UPLC was developed for the analysis of ultra trace 24-epibrassinolide. The developed method was ultrasensitive with detection limit as low as 0.7 ng/L, and the linear range of the method was 3-5000 ng/L. The endogenous 24-epibrassinolide in pollen, flower and seed samples was determined, which showed satisfactory recoveries in the range of 81.2-116% and good precision with relative standard deviation (RSD) values between 4.7 and 9.7%. This online analytical method was sensitive, reliable, rapid and applicable to trace analysis in complex samples.

  11. Differentially Coexpressed Disease Gene Identification Based on Gene Coexpression Network.

    PubMed

    Jiang, Xue; Zhang, Han; Quan, Xiongwen

    2016-01-01

    Screening disease-related genes by analyzing gene expression data has become a popular theme. Traditional disease-related gene selection methods always focus on identifying differentially expressed gene between case samples and a control group. These traditional methods may not fully consider the changes of interactions between genes at different cell states and the dynamic processes of gene expression levels during the disease progression. However, in order to understand the mechanism of disease, it is important to explore the dynamic changes of interactions between genes in biological networks at different cell states. In this study, we designed a novel framework to identify disease-related genes and developed a differentially coexpressed disease-related gene identification method based on gene coexpression network (DCGN) to screen differentially coexpressed genes. We firstly constructed phase-specific gene coexpression network using time-series gene expression data and defined the conception of differential coexpression of genes in coexpression network. Then, we designed two metrics to measure the value of gene differential coexpression according to the change of local topological structures between different phase-specific networks. Finally, we conducted meta-analysis of gene differential coexpression based on the rank-product method. Experimental results demonstrated the feasibility and effectiveness of DCGN and the superior performance of DCGN over other popular disease-related gene selection methods through real-world gene expression data sets.

  12. Covariance analysis of differential drag-based satellite cluster flight

    NASA Astrophysics Data System (ADS)

    Ben-Yaacov, Ohad; Ivantsov, Anatoly; Gurfil, Pini

    2016-06-01

    One possibility for satellite cluster flight is to control relative distances using differential drag. The idea is to increase or decrease the drag acceleration on each satellite by changing its attitude, and use the resulting small differential acceleration as a controller. The most significant advantage of the differential drag concept is that it enables cluster flight without consuming fuel. However, any drag-based control algorithm must cope with significant aerodynamical and mechanical uncertainties. The goal of the current paper is to develop a method for examination of the differential drag-based cluster flight performance in the presence of noise and uncertainties. In particular, the differential drag control law is examined under measurement noise, drag uncertainties, and initial condition-related uncertainties. The method used for uncertainty quantification is the Linear Covariance Analysis, which enables us to propagate the augmented state and filter covariance without propagating the state itself. Validation using a Monte-Carlo simulation is provided. The results show that all uncertainties have relatively small effect on the inter-satellite distance, even in the long term, which validates the robustness of the used differential drag controller.

  13. Differentially Coexpressed Disease Gene Identification Based on Gene Coexpression Network

    PubMed Central

    Quan, Xiongwen

    2016-01-01

    Screening disease-related genes by analyzing gene expression data has become a popular theme. Traditional disease-related gene selection methods always focus on identifying differentially expressed gene between case samples and a control group. These traditional methods may not fully consider the changes of interactions between genes at different cell states and the dynamic processes of gene expression levels during the disease progression. However, in order to understand the mechanism of disease, it is important to explore the dynamic changes of interactions between genes in biological networks at different cell states. In this study, we designed a novel framework to identify disease-related genes and developed a differentially coexpressed disease-related gene identification method based on gene coexpression network (DCGN) to screen differentially coexpressed genes. We firstly constructed phase-specific gene coexpression network using time-series gene expression data and defined the conception of differential coexpression of genes in coexpression network. Then, we designed two metrics to measure the value of gene differential coexpression according to the change of local topological structures between different phase-specific networks. Finally, we conducted meta-analysis of gene differential coexpression based on the rank-product method. Experimental results demonstrated the feasibility and effectiveness of DCGN and the superior performance of DCGN over other popular disease-related gene selection methods through real-world gene expression data sets. PMID:28042568

  14. Differential entropy feature for EEG-based vigilance estimation.

    PubMed

    Shi, Li-Chen; Jiao, Ying-Ying; Lu, Bao-Liang

    2013-01-01

    This paper proposes a novel feature called differential entropy for EEG-based vigilance estimation. By mathematical derivation, we find an interesting relationship between the proposed differential entropy and the existing logarithm energy spectrum. We present a physical interpretation of the logarithm energy spectrum which is widely used in EEG signal analysis. To evaluate the performance of the proposed differential entropy feature for vigilance estimation, we compare it with four existing features on an EEG data set of twenty-three subjects. All of the features are projected to the same dimension by principal component analysis algorithm. Experiment results show that differential entropy is the most accurate and stable EEG feature to reflect the vigilance changes.

  15. Wearable solar cells by stacking textile electrodes.

    PubMed

    Pan, Shaowu; Yang, Zhibin; Chen, Peining; Deng, Jue; Li, Houpu; Peng, Huisheng

    2014-06-10

    A new and general method to produce flexible, wearable dye-sensitized solar cell (DSC) textiles by the stacking of two textile electrodes has been developed. A metal-textile electrode that was made from micrometer-sized metal wires was used as a working electrode, while the textile counter electrode was woven from highly aligned carbon nanotube fibers with high mechanical strengths and electrical conductivities. The resulting DSC textile exhibited a high energy conversion efficiency that was well maintained under bending. Compared with the woven DSC textiles that are based on wire-shaped devices, this stacked DSC textile unexpectedly exhibited a unique deformation from a rectangle to a parallelogram, which is highly desired in portable electronics. This lightweight and wearable stacked DSC textile is superior to conventional planar DSCs because the energy conversion efficiency of the stacked DSC textile was independent of the angle of incident light.

  16. Contemporary sample stacking in analytical electrophoresis.

    PubMed

    Šlampová, Andrea; Malá, Zdena; Pantůčková, Pavla; Gebauer, Petr; Boček, Petr

    2013-01-01

    Sample stacking is a term denoting a multifarious class of methods and their names that are used daily in CE for online concentration of diluted samples to enhance separation efficiency and sensitivity of analyses. The essence of these methods is that analytes present at low concentrations in a large injected sample zone are concentrated into a short and sharp zone (stack) in the separation capillary. Then the stacked analytes are separated and detected. Regardless of the diversity of the stacking electromigration methods, one can distinguish four main principles that form the bases of nearly all of them: (i) Kohlrausch adjustment of concentrations, (ii) pH step, (iii) micellar methods, and (iv) transient ITP. This contribution is a continuation of our previous reviews on the topic and brings an overview of papers published during 2010-2012 and relevant to the mentioned principles (except the last one which is covered by another review in this issue).

  17. Optimization on photoelectric detection based on stacked La0.9Sr0.1MnO3-δ/LaAlO3-δ multijunctions

    NASA Astrophysics Data System (ADS)

    Xing, Jie; Ying Hao, Hui; Jia Guo, Er; Yang, Fang

    2011-08-01

    Three multijunctions consisting of La0.9Sr0.1MnO3-δ and LaAlO3-δ on Si substrate have been fabricated under different oxygen pressures by laser molecular beam epitaxy. They exhibit nonlinear and rectifying current-voltage characteristics and evident photocurrent response to He-Ne laser illumination. Experimental results indicate that the periodically stacked multijunction grown under lower oxygen pressure shows a better rectification behavior and a higher photocurrent. The photovoltaic responsivities of the multijunctions are enhanced greatly at reverse bias and are much higher than that of a similarly grown single p-n junction. Based on the band structure of the multilayers, a possible mechanism of the photovoltaic process was proposed. A high photovoltage responsivity of 168.6 mV/mW has been achieved at - 6 V bias; this demonstrates the potential of the present multijunction configuration for photodetectors operating at room temperature.

  18. Physics based analytical model for surface potential and subthreshold current of cylindrical Schottky Barrier gate all around MOSFET with high-k gate stack

    NASA Astrophysics Data System (ADS)

    Kumar, Manoj; Haldar, Subhasis; Gupta, Mridula; Gupta, R. S.

    2016-02-01

    A physics-based analytical model for Schottky Barrier (SB) Cylindrical Gate All Around (CGAA) MOSFET with high-k dielectric is presented with Evanescent Mode Analysis (EMA). The electrostatic potential is obtained using the Superposition method. An exact expression for threshold voltage and subthreshold slope is also obtained. The proposed model also includes the effect of Barrier height lowering at metal semiconductor interface along with the effect of high-k (HfO2) gate stack. Diffusion current and tunneling currents are combined to evaluate the total subthreshold current. The analytical results so obtained are compared with simulated data and they are in good agreement. The proposed model of SB-CGAA device with high-k dielectric is very useful for the design and optimization for high current and improved performance.

  19. Gene stacking by recombinases

    Technology Transfer Automated Retrieval System (TEKTRAN)

    Efficient methods of stacking genes into plant genomes are needed to expedite transfer of multigenic traits into diverse crops grown in a variety of environments. Over two decades of research has identified several site-specific recombinases that carry out efficient cis and trans recombination betw...

  20. Stacked Sequential Learning

    DTIC Science & Technology

    2005-07-01

    a constant factor of K + 2. (To see this, note sequential stacking requires training K+2 classifiers: the classifiers f1, . . . , fK used in cross...on the non- sequential learners (ME and VP) but improves per- formance of the sequential learners (CRFs and VPH - MMs) less consistently. This pattern

  1. Stacking interactions in PUF-RNA complexes

    SciTech Connect

    Yiling Koh, Yvonne; Wang, Yeming; Qiu, Chen; Opperman, Laura; Gross, Leah; Tanaka Hall, Traci M; Wickens, Marvin

    2012-07-02

    Stacking interactions between amino acids and bases are common in RNA-protein interactions. Many proteins that regulate mRNAs interact with single-stranded RNA elements in the 3' UTR (3'-untranslated region) of their targets. PUF proteins are exemplary. Here we focus on complexes formed between a Caenorhabditis elegans PUF protein, FBF, and its cognate RNAs. Stacking interactions are particularly prominent and involve every RNA base in the recognition element. To assess the contribution of stacking interactions to formation of the RNA-protein complex, we combine in vivo selection experiments with site-directed mutagenesis, biochemistry, and structural analysis. Our results reveal that the identities of stacking amino acids in FBF affect both the affinity and specificity of the RNA-protein interaction. Substitutions in amino acid side chains can restrict or broaden RNA specificity. We conclude that the identities of stacking residues are important in achieving the natural specificities of PUF proteins. Similarly, in PUF proteins engineered to bind new RNA sequences, the identity of stacking residues may contribute to 'target' versus 'off-target' interactions, and thus be an important consideration in the design of proteins with new specificities.

  2. 23. Brick coke quencher, brick stack, metal stack to right, ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    23. Brick coke quencher, brick stack, metal stack to right, coke gas pipe to left; in background, BOF building, limestone piles, Levy's Slag Dump. Looking north/northwest - Rouge Steel Company, 3001 Miller Road, Dearborn, MI

  3. Differential Ring Oscillator Based Capacitance Sensor for Microfluidic Applications.

    PubMed

    Mohammad, Kaveh; Thomson, Douglas J

    2017-04-01

    A simple high frequency capacitance sensor with 180 aF sensitivity is designed for a wide range of microfluidic applications. The sensor is implemented utilizing differential ring oscillators operating at [Formula: see text] MHz with a differential signal at [Formula: see text] MHz. The sensor occupies [Formula: see text] cm × 2 cm on a printed circuit board. The sensor is tuned using two precision variable capacitors and has a full scale range of [Formula: see text] pF. The sensor was able to detect less than 1% Isopropyl Alcohol in DI water and to detect 15 μm polystyrene spheres flowing over 25 μm lines and spaces coplanar electrodes in a microfluidic channel. The compact differential ring oscillator based architecture of the design makes it suitable to be integrated into microprocessor based systems for detection in Lab on Chip or Lab on Board applications.

  4. Discrimination of reservoir dolostone within tight limestone using rock physics modeling and pre-stack parameters

    NASA Astrophysics Data System (ADS)

    Park, G.; Lee, B.; Lee, G.

    2013-12-01

    Dolostones may be differentiated from limestones based on various pre-stack seismic parameters as they are denser and faster. However, because the seismic properties of a rock are affected strongly by porosity, porous dolostones may not be significantly denser and faster than limestones. We computed various pre-stack parameters (P-impedance, S-impedance, Vp/Vs, Poisson's ratio, Lamé constants) for tight limestones using the Vp and density logs from a well that penetrated Jurassic carbonate and the Vs log, constructed from the empirical relationships of Vp and Vs. The pre-stack parameters of dolostones with 1% - 40% porosity were estimated based on the bulk and shear moduli and bulk densities computed from the formulas proposed by various workers, including Gassmann equations. Crossplots of the pre-stack parameters show that the Lamé constants (λ, μ) are most effective in differentiating dolostones from limestones. In particular, the λρ -μρ vs. μρ crossplot shows a clear-cut separation of the porous dolostones and tight limestones; the porous dolostones plot exclusively to the left of the λρ -μρ of about 25 GPa.

  5. ETR WASTE GAS STACK. ABOVE GROUND DUCTWORK AND ETR STACK, ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    ETR WASTE GAS STACK. ABOVE GROUND DUCTWORK AND ETR STACK, CLOSER VIEW. PERSONNEL LADDER AND CIRCULAR WORK PLATFORM MIDWAY UP STACK. CAMERA FACES NORTH. INL NEGATIVE NO. HD42-7-2. Mike Crane, Photographer, 3/2004 - Idaho National Engineering Laboratory, Test Reactor Area, Materials & Engineering Test Reactors, Scoville, Butte County, ID

  6. Solution of partial differential equations by agent-based simulation

    NASA Astrophysics Data System (ADS)

    Szilagyi, Miklos N.

    2014-01-01

    The purpose of this short note is to demonstrate that partial differential equations can be quickly solved by agent-based simulation with high accuracy. There is no need for the solution of large systems of algebraic equations. This method is especially useful for quick determination of potential distributions and demonstration purposes in teaching electromagnetism.

  7. Design and Experimental Study of a Current Transformer with a Stacked PCB Based on B-Dot.

    PubMed

    Wang, Jingang; Si, Diancheng; Tian, Tian; Ren, Ran

    2017-04-10

    An electronic current transformer with a B-dot sensor is proposed in this study. The B-dot sensor can realize the current measurement of the transmission line in a non-contact way in accordance with the principle of magnetic field coupling. The multiple electrodes series-opposing structure is applied together with differential input structures and active integrating circuits, which can allow the sensor to operate in differential mode. Maxwell software is adopted to model and simulate the sensor. Optimization of the sensor structural parameters is conducted through finite-element simulation. A test platform is built to conduct the steady-state characteristic, on-off operation, and linearity tests for the designed current transformer under the power-frequency current. As shown by the test results, in contrast with traditional electromagnetic CT, the designed current transformer can achieve high accuracy and good phase-frequency; its linearity is also very good at different distances from the wire. The proposed current transformer provides a new method for electricity larceny prevention and on-line monitoring of the power grid in an electric system, thereby satisfying the development demands of the smart power grid.

  8. Self-mixing differential vibrometer based on electronic channel subtraction.

    PubMed

    Donati, Silvano; Norgia, Michele; Giuliani, Guido

    2006-10-01

    An instrument for noncontact measurement of differential vibrations is developed, based on the self-mixing interferometer. As no reference arm is available in the self-mixing configuration, the differential mode is obtained by electronic subtraction of signals from two (nominally equal) vibrometer channels, taking advantage that channels are servo stabilized and thus insensitive to speckle and other sources of amplitude fluctuation. We show that electronic subtraction is nearly as effective as field superposition. Common-mode suppression is 25-30 dB, the dynamic range (amplitude) is in excess of 100 microm, and the minimum measurable (differential) amplitude is 20 nm on a B = 10 kHz bandwidth. The instrument has been used to measure vibrations of two metal samples kept in contact, revealing the hysteresis cycle in the microslip and gross-slip regimes, which are of interest in the study of friction induced vibration damping of gas turbine blades for aircraft applications.

  9. Efficient image compression scheme based on differential coding

    NASA Astrophysics Data System (ADS)

    Zhu, Li; Wang, Guoyou; Liu, Ying

    2007-11-01

    Embedded zerotree (EZW) and Set Partitioning in Hierarchical Trees (SPIHT) coding, introduced by J.M. Shapiro and Amir Said, are very effective and being used in many fields widely. In this study, brief explanation of the principles of SPIHT was first provided, and then, some improvement of SPIHT algorithm according to experiments was introduced. 1) For redundancy among the coefficients in the wavelet region, we propose differential method to reduce it during coding. 2) Meanwhile, based on characteristic of the coefficients' distribution in subband, we adjust sorting pass and optimize differential coding, in order to reduce the redundancy coding in each subband. 3) The image coding result, calculated by certain threshold, shows that through differential coding, the rate of compression get higher, and the quality of reconstructed image have been get raised greatly, when bpp (bit per pixel)=0.5, PSNR (Peak Signal to Noise Ratio) of reconstructed image exceeds that of standard SPIHT by 0.2~0.4db.

  10. Energy Expenditure of Sport Stacking

    ERIC Educational Resources Information Center

    Murray, Steven R.; Udermann, Brian E.; Reineke, David M.; Battista, Rebecca A.

    2009-01-01

    Sport stacking is an activity taught in many physical education programs. The activity, although very popular, has been studied minimally, and the energy expenditure for sport stacking is unknown. Therefore, the purposes of this study were to determine the energy expenditure of sport stacking in elementary school children and to compare that value…

  11. Iridium Interfacial Stack (IRIS)

    NASA Technical Reports Server (NTRS)

    Spry, David James (Inventor)

    2015-01-01

    An iridium interfacial stack ("IrIS") and a method for producing the same are provided. The IrIS may include ordered layers of TaSi.sub.2, platinum, iridium, and platinum, and may be placed on top of a titanium layer and a silicon carbide layer. The IrIS may prevent, reduce, or mitigate against diffusion of elements such as oxygen, platinum, and gold through at least some of its layers.

  12. Fuel Cell Stacks

    DTIC Science & Technology

    1975-04-01

    AD-A009 587 FUEL CELL STACKS Bernard S. Baker Energy Research Corporation Prepared for: Army Mobility Equipment Research and Development Center April... Mobility Equipment Research and Development Center Unclassified For- Belvoir, Virginia 22060 [15. DE.CLASSIFICATION/L.TWNOGRADING SCREOUJLE 16...the majority of effort has been directed at translating technoilogy for small comn- ponent manufacture on a laboratory scale into large size components

  13. Silicon Micropore based Electromechanical Transducer to Differentiate Tumor Cells

    NASA Astrophysics Data System (ADS)

    Ali, Waqas; Raza, Muhammad U.; Khanzada, Raja R.; Kim, Young-Tae; Iqbal, Samir M.

    2015-03-01

    Solid-state micropores have been used before to differentiate cancer cells from normal cells using size-based filtering. Tumor cells differ from normal ones not only in size but also in physical properties like elasticity, shape, motility etc. Tumor cells show different physical attributes depending on the stage and type of cancer. We report a micropore based electromechanical transducer that differentiated cancer cells based on their mechanophysical properties. The device was interfaced with a high-speed patch-clamp measurement system that biased the ionic solution across the silicon-based membrane. The bias resulted in the flow of ionic current. Electrical pulses were generated when cells passed through. Different cells depicted characteristic pulses. Translocation profiles of cells that were either small or were more elastic and flexible caused electrical pulses shorter in widths and amplitudes whereas cells with larger size or lesser elasticity/flexibility showed deeper and wider pulses. Three non-small cell lung cancer (NSCLC) cell lines NCI-H1155, A549 and NCI-H460 were successfully differentiated. NCI-H1155, due to their comparatively smaller size, were found quickest in translocating through. The solid-sate micropore based electromechanical transducer could process the whole blood sample of cancer patient without any pre-processing requirements and is ideal for point-of-care applications. Support Acknowledged from NSF through ECCS-1201878.

  14. Electron attachment to solvated dGpdG: effects of stacking on base-centered and phosphate-centered valence-bound radical anions.

    PubMed

    Gu, Jiande; Liang, Guoming; Xie, Yaoming; Schaefer, Henry F

    2012-04-23

    To explore the nature of electron attachment to guanine-centered DNA single strands in the presence of a polarizable medium, a theoretical investigation of the DNA oligomer dinucleoside phosphate deoxyguanylyl-3',5'-deoxyguanosine (dGpdG) was performed by using density functional theory. Four different electron-distribution patterns for the radical anions of dGpdG in aqueous solution have been located as local minima on the potential energy surface. The excess electron is found to reside on the proton of the phosphate group (dGp(H-)dG), or on the phosphate group (dGp(.-)dG), or on the nucleobase at the 5' position (dG(.-)pdG), or on the nucleobase at the 3' position (dGpdG(.-)), respectively. These four radical anions are all expected to be electronically viable species under the influence of the polarizable medium. The predicted energetics of the radical anions follows the order dGp(.-)dG>dG(.-)pdG>dGpdG(.-)>dGp(H-)dG. The base-base stacking pattern in DNA single strands seems unaffected by electron attachment. On the contrary, intrastrand H-bonding is greatly influenced by electron attachment, especially in the formation of base-centered radical anions. The intrastrand H-bonding patterns revealed in this study also suggest that intrastrand proton transfer might be possible between successive guanines due to electron attachment to DNA single strands.

  15. Differential Characteristics Based Iterative Multiuser Detection for Wireless Sensor Networks

    PubMed Central

    Chen, Xiaoguang; Jiang, Xu; Wu, Zhilu; Zhuang, Shufeng

    2017-01-01

    High throughput, low latency and reliable communication has always been a hot topic for wireless sensor networks (WSNs) in various applications. Multiuser detection is widely used to suppress the bad effect of multiple access interference in WSNs. In this paper, a novel multiuser detection method based on differential characteristics is proposed to suppress multiple access interference. The proposed iterative receive method consists of three stages. Firstly, a differential characteristics function is presented based on the optimal multiuser detection decision function; then on the basis of differential characteristics, a preliminary threshold detection is utilized to find the potential wrongly received bits; after that an error bit corrector is employed to correct the wrong bits. In order to further lower the bit error ratio (BER), the differential characteristics calculation, threshold detection and error bit correction process described above are iteratively executed. Simulation results show that after only a few iterations the proposed multiuser detection method can achieve satisfactory BER performance. Besides, BER and near far resistance performance are much better than traditional suboptimal multiuser detection methods. Furthermore, the proposed iterative multiuser detection method also has a large system capacity. PMID:28212328

  16. Investigating the base of the mantle using differential travel times

    NASA Astrophysics Data System (ADS)

    Wysession, Michael E.; Valenzuela, Raul W.; Zhu, An-Ning; Bartkó, Lilla

    1995-11-01

    Several techniques using differential seismic travel times to map lateral structure in the lowermost mantle are discussed. Results are shown for recent studies involving the established techniques of core-reflected phases (ScS-S and PcP-P) and diffracted phase profiles (Sdiff), and new techniques involving the differential times of both core-transmitted and core-diffracted phases (PKP-Pdiff and Sdiff-SKS-SKKS) are described. The recent databases of digital seismograms have allowed for a study of D″ velocities in the Eastern Hemisphere using ScS-S and sScS-sS differential times from the many Western Pacific earthquakes. The result is an image at a resolution of a few hundred kilometers of a slow velocity anomaly of 2500 km width beneath Micronesia (-2% relative to the Preliminary Reference Earth Model (PREM)) that is surrounded on three sides by fast D″ rock that is 3% faster than PREM. A study using the differential arrivals of core-diffracted S waves (Sdiff) from digital records is providing information about long-wavelength variations in D″ shear velocities, though the rigorous earthquake-station geometry requirements limit the study to particular regions of the globe. Another study is using over 40 000 PcP-P differential travel times as reported to the International Seismological Centre to map global P velocities at the base of the mantle, and it shows that global coverage of the core-mantle boundary (CMB) is very poor. Though there are some regions (Northern Asia, Northern Pacific, Central America) with enough data sampling to allow a quantification of average D″ P velocities (with a total robust range of 4% lateral variation), they cover only a small portion of the total CMB. As a means of increasing our understanding of the long-wavelength variations of seismic velocities, a description is given of two techniques that will take advantage of totally different sets of earthquake-station geometries from the core-reflected phase studies. In the distance

  17. Interactive visualization of multiresolution image stacks in 3D.

    PubMed

    Trotts, Issac; Mikula, Shawn; Jones, Edward G

    2007-04-15

    Conventional microscopy, electron microscopy, and imaging techniques such as MRI and PET commonly generate large stacks of images of the sectioned brain. In other domains, such as neurophysiology, variables such as space or time are also varied along a stack axis. Digital image sizes have been progressively increasing and in virtual microscopy, it is now common to work with individual image sizes that are several hundred megapixels and several gigabytes in size. The interactive visualization of these high-resolution, multiresolution images in 2D has been addressed previously [Sullivan, G., and Baker, R., 1994. Efficient quad-tree coding of images and video. IEEE Trans. Image Process. 3 (3), 327-331]. Here, we describe a method for interactive visualization of multiresolution image stacks in 3D. The method, characterized as quad-tree based multiresolution image stack interactive visualization using a texel projection based criterion, relies on accessing and projecting image tiles from multiresolution image stacks in such a way that, from the observer's perspective, image tiles all appear approximately the same size even though they are accessed from different tiers within the images comprising the stack. This method enables efficient navigation of high-resolution image stacks. We implement this method in a program called StackVis, which is a Windows-based, interactive 3D multiresolution image stack visualization system written in C++ and using OpenGL. It is freely available at http://brainmaps.org.

  18. Thermoacoustics with idealized heat exchangers and no stack.

    PubMed

    Wakeland, Ray Scott; Keolian, Robert M

    2002-06-01

    A model is developed for thermoacoustic devices that have neither stack nor regenerator. These "no-stack" devices have heat exchangers placed close together in an acoustic standing wave of sufficient amplitude to allow individual parcels of gas to enter both exchangers. The assumption of perfect heat transfer in the exchangers facilitates the construction of a simple model similar to the "moving parcel picture" that is used as a first approach to stack-based engines and refrigerators. The model no-stack cycle is shown to have potentially greater inviscid efficiency than a comparable stack model. However, losses from flow through the heat exchangers and on the walls of the enclosure are greater than those in a stack-based device due to the increased acoustic pressure amplitude. Estimates of these losses in refrigerators are used to compare the possible efficiencies of real refrigerators made with or without a stack. The model predicts that no-stack refrigerators can exceed stack-based refrigerators in efficiency, but only for particular enclosure geometries.

  19. Structural color-tunable mesoporous bragg stack layers based on graft copolymer self-assembly for high-efficiency solid-state dye-sensitized solar cells

    NASA Astrophysics Data System (ADS)

    Lee, Chang Soo; Park, Jung Tae; Kim, Jong Hak

    2016-08-01

    We present a facile fabrication route for structural color-tunable mesoporous Bragg stack (BS) layers based on the self-assembly of a cost-effective graft copolymer. The mesoporous BS layers are prepared through the alternating deposition of organized mesoporous-TiO2 (OM-TiO2) and -SiO2 (OM-SiO2) films on the non-conducting side of the counter electrode in dye-sensitized solar cells (DSSCs). The OM layers with controlled porosity, pore size, and refractive index are templated with amphiphilic graft copolymers consisting of poly(vinyl chloride) backbones and poly(oxyethylene methacrylate) side chains, i.e., PVC-g-POEM. The morphology and properties of the structural color-tunable mesoporous BS-functionalized electrodes are characterized using energy filtered transmission electron microscopy (EF-TEM), field emission-scanning electron microscopy (FE-SEM), spectroscopic ellipsometry, and reflectance spectroscopy. The solid-state DSSCs (ssDSSCs) based on a structural color-tunable mesoporous BS counter electrode with a single-component solid electrolyte show an energy conversion efficiency (η) of 7.1%, which is much greater than that of conventional nanocrystalline TiO2-based cells and one of the highest values for N719 dye-based ssDSSCs. The enhancement of η is due to the enhancement of current density (Jsc), attributed to the improved light harvesting properties without considerable decrease in fill factor (FF) or open-circuit voltage (Voc), as confirmed by incident photon-to-electron conversion efficiency (IPCE) and electrochemical impedance spectroscopy (EIS).

  20. Three-Dimensional Flexible Complementary Metal-Oxide-Semiconductor Logic Circuits Based On Two-Layer Stacks of Single-Walled Carbon Nanotube Networks.

    PubMed

    Zhao, Yudan; Li, Qunqing; Xiao, Xiaoyang; Li, Guanhong; Jin, Yuanhao; Jiang, Kaili; Wang, Jiaping; Fan, Shoushan

    2016-02-23

    We have proposed and fabricated stable and repeatable, flexible, single-walled carbon nanotube (SWCNT) thin film transistor (TFT) complementary metal-oxide-semiconductor (CMOS) integrated circuits based on a three-dimensional (3D) structure. Two layers of SWCNT-TFT devices were stacked, where one layer served as n-type devices and the other one served as p-type devices. On the basis of this method, it is able to save at least half of the area required to construct an inverter and make large-scale and high-density integrated CMOS circuits easier to design and manufacture. The 3D flexible CMOS inverter gain can be as high as 40, and the total noise margin is more than 95%. Moreover, the input and output voltage of the inverter are exactly matched for cascading. 3D flexible CMOS NOR, NAND logic gates, and 15-stage ring oscillators were fabricated on PI substrates with high performance as well. Stable electrical properties of these circuits can be obtained with bending radii as small as 3.16 mm, which shows that such a 3D structure is a reliable architecture and suitable for carbon nanotube electrical applications in complex flexible and wearable electronic devices.

  1. A paper-based electrostatic kinetic energy harvester with stacked multiple electret films made of electrospun polymer nanofibers

    NASA Astrophysics Data System (ADS)

    Lu, Y.; Amroun, D.; Leprince-Wang, Y.; Basset, P.

    2016-11-01

    This paper reports the first flexible electrostatic kinetic energy harvester (e-KEH) with electret nanofibrous films obtained by electrospinning and paper-based electrodes. The nanofibrous electret outperforms plenary thin film Parylene in the storage stability of charge: the surface potential is stabilized within 1 day, without any obvious minishing during the following 9 days. The output power of the device is improved by implementing multiple electret layers, where the optimal number of electret layer is 3. With a finger tapping activation, this first prototype with the optimal configuration gives a maximum peak power of 45.6 μW with the optimal load of 16 MΩ. Working with a full-wave diode rectifier and a storage capacitor of 10nF, the voltage reaches 8.5 V with 450 strokes.

  2. Stacked Extreme Learning Machines.

    PubMed

    Zhou, Hongming; Huang, Guang-Bin; Lin, Zhiping; Wang, Han; Soh, Yeng Chai

    2015-09-01

    Extreme learning machine (ELM) has recently attracted many researchers' interest due to its very fast learning speed, good generalization ability, and ease of implementation. It provides a unified solution that can be used directly to solve regression, binary, and multiclass classification problems. In this paper, we propose a stacked ELMs (S-ELMs) that is specially designed for solving large and complex data problems. The S-ELMs divides a single large ELM network into multiple stacked small ELMs which are serially connected. The S-ELMs can approximate a very large ELM network with small memory requirement. To further improve the testing accuracy on big data problems, the ELM autoencoder can be implemented during each iteration of the S-ELMs algorithm. The simulation results show that the S-ELMs even with random hidden nodes can achieve similar testing accuracy to support vector machine (SVM) while having low memory requirements. With the help of ELM autoencoder, the S-ELMs can achieve much better testing accuracy than SVM and slightly better accuracy than deep belief network (DBN) with much faster training speed.

  3. An ordinary differential equation based solution path algorithm.

    PubMed

    Wu, Yichao

    2011-01-01

    Efron, Hastie, Johnstone and Tibshirani (2004) proposed Least Angle Regression (LAR), a solution path algorithm for the least squares regression. They pointed out that a slight modification of the LAR gives the LASSO (Tibshirani, 1996) solution path. However it is largely unknown how to extend this solution path algorithm to models beyond the least squares regression. In this work, we propose an extension of the LAR for generalized linear models and the quasi-likelihood model by showing that the corresponding solution path is piecewise given by solutions of ordinary differential equation systems. Our contribution is twofold. First, we provide a theoretical understanding on how the corresponding solution path propagates. Second, we propose an ordinary differential equation based algorithm to obtain the whole solution path.

  4. Differential equation based method for accurate approximations in optimization

    NASA Technical Reports Server (NTRS)

    Pritchard, Jocelyn I.; Adelman, Howard M.

    1990-01-01

    A method to efficiently and accurately approximate the effect of design changes on structural response is described. The key to this method is to interpret sensitivity equations as differential equations that may be solved explicitly for closed form approximations, hence, the method is denoted the Differential Equation Based (DEB) method. Approximations were developed for vibration frequencies, mode shapes and static displacements. The DEB approximation method was applied to a cantilever beam and results compared with the commonly-used linear Taylor series approximations and exact solutions. The test calculations involved perturbing the height, width, cross-sectional area, tip mass, and bending inertia of the beam. The DEB method proved to be very accurate, and in most cases, was more accurate than the linear Taylor series approximation. The method is applicable to simultaneous perturbation of several design variables. Also, the approximations may be used to calculate other system response quantities. For example, the approximations for displacements are used to approximate bending stresses.

  5. A stack-based flex-compressive piezoelectric energy harvesting cell for large quasi-static loads

    NASA Astrophysics Data System (ADS)

    Wang, Xianfeng; Shi, Zhifei; Wang, Jianjun; Xiang, Hongjun

    2016-05-01

    In this paper, a flex-compressive piezoelectric energy harvesting cell (F-C PEHC) is proposed. This cell has a large load capacity and adjustable force transmission coefficient assembled from replaceable individual components. A statically indeterminate mechanical model for the cell is established and the theoretical force transmission coefficient is derived based on structural mechanics. An inverse correlation between the force transmission coefficient and the relative stiffness of Element 1’s limbs is found. An experimental study is also conducted to verify the theoretical results. Both weakened and enhanced modes are achieved for this experiment. The maximum power output approaches 4.5 mW at 120 kΩ resistive load under a 4 Hz harmonic excitation with 600 N amplitude for the weakened mode, whereas the maximum power output approaches 17.8 mW at 120 kΩ under corresponding load for the enhanced mode. The experimental measurements of output voltages are compared with the theoretical ones in both weakened and enhanced modes. The experimental measurements of open-circuit voltages are slightly smaller for harmonic excitations with amplitudes that vary from 400 N to 800 N and the errors are within 14%. During the experiment, the maximum load approaches 2.8 kN which is quite large but not the ultimate bearing capacity of the present device. The mechanical model and theoretical transmission coefficient can be used in other flex-compressive mode energy transducers.

  6. Application of an adaptive acquisition regularization parameter based on an improved GCV criterion in pre-stack AVO inversion

    NASA Astrophysics Data System (ADS)

    Huang, Guangtan; Chen, Xiaohong; Li, Jingye; Luo, Cong; Wang, Benfeng

    2017-02-01

    In exploration geophysics, AVO inversion is undoubtedly the most common inverse problem which is ill-posed and must be regularized. Once regularization is used, the selection of the regularization parameter will become an important problem to solve. In practice, the proper regularization parameter value is usually data dependent and determined empirically. For one work area, inversion engineers often give a fixed parameter. In such a case, the results of AVO inversion will be accompanied by strong artificial subjective factors. Besides, it is difficult to guarantee that the fixed parameter could be applied to each trace of the seismic data. In this paper, we first emphasize the importance of the regularization parameter selection for the inverse problems. Then, based on a traditional GCV function, we propose an adaptive acquisition regularization parameter method which can be used in regularization for arbitrary norm conditions, and derive the theoretical formula of the adaptive computation of the regularization parameter. Applying this method to the AVO inversion of synthetic data and field data, we have found that the improved GCV method has better accuracy and robustness than the traditional method.

  7. Electrochemical Detection in Stacked Paper Networks.

    PubMed

    Liu, Xiyuan; Lillehoj, Peter B

    2015-08-01

    Paper-based electrochemical biosensors are a promising technology that enables rapid, quantitative measurements on an inexpensive platform. However, the control of liquids in paper networks is generally limited to a single sample delivery step. Here, we propose a simple method to automate the loading and delivery of liquid samples to sensing electrodes on paper networks by stacking multiple layers of paper. Using these stacked paper devices (SPDs), we demonstrate a unique strategy to fully immerse planar electrodes by aqueous liquids via capillary flow. Amperometric measurements of xanthine oxidase revealed that electrochemical sensors on four-layer SPDs generated detection signals up to 75% higher compared with those on single-layer paper devices. Furthermore, measurements could be performed with minimal user involvement and completed within 30 min. Due to its simplicity, enhanced automation, and capability for quantitative measurements, stacked paper electrochemical biosensors can be useful tools for point-of-care testing in resource-limited settings.

  8. Fuel cell stack monitoring and system control

    DOEpatents

    Keskula, Donald H.; Doan, Tien M.; Clingerman, Bruce J.

    2005-01-25

    A control method for monitoring a fuel cell stack in a fuel cell system in which the actual voltage and actual current from the fuel cell stack are monitored. A preestablished relationship between voltage and current over the operating range of the fuel cell is established. A variance value between the actual measured voltage and the expected voltage magnitude for a given actual measured current is calculated and compared with a predetermined allowable variance. An output is generated if the calculated variance value exceeds the predetermined variance. The predetermined voltage-current for the fuel cell is symbolized as a polarization curve at given operating conditions of the fuel cell. Other polarization curves may be generated and used for fuel cell stack monitoring based on different operating pressures, temperatures, hydrogen quantities.

  9. EPRI wet stacks design guide

    SciTech Connect

    Weilert, C.V.; Pattison, D.C.; Richart, S.D.

    1995-06-01

    Because of the high cost of reheat, wet stacks are being considered for new or retrofit applications of wet FGD systems in the United States. All retrofit systems designed for compliance with Phase I of the Acid Rain Control program under the Clean Air Act have utilized wet stacks. For Phase II, utilities with existing wet FGD systems would benefit from overscrubbing. For those units which currently use bypass reheat, this could be accomplished by closing the bypass to treat the entire boiler flue gas stream. This would require conversion to wet stack operation. Due to the level of interest in these wet stack scenarios for future FGD applications, EPRI, in a tailored collaboration with NYSEG, retained Bums & McDonnell and DynaFlow Systems to prepare a design guide for wet stacks. This paper provides a brief summary of the wet stacks design guide.

  10. On-site detection of stacked genetically modified soybean based on event-specific TM-LAMP and a DNAzyme-lateral flow biosensor.

    PubMed

    Cheng, Nan; Shang, Ying; Xu, Yuancong; Zhang, Li; Luo, Yunbo; Huang, Kunlun; Xu, Wentao

    2017-05-15

    Stacked genetically modified organisms (GMO) are becoming popular for their enhanced production efficiency and improved functional properties, and on-site detection of stacked GMO is an urgent challenge to be solved. In this study, we developed a cascade system combining event-specific tag-labeled multiplex LAMP with a DNAzyme-lateral flow biosensor for reliable detection of stacked events (DP305423× GTS 40-3-2). Three primer sets, both event-specific and soybean species-specific, were newly designed for the tag-labeled multiplex LAMP system. A trident-like lateral flow biosensor displayed amplified products simultaneously without cross contamination, and DNAzyme enhancement improved the sensitivity effectively. After optimization, the limit of detection was approximately 0.1% (w/w) for stacked GM soybean, which is sensitive enough to detect genetically modified content up to a threshold value established by several countries for regulatory compliance. The entire detection process could be shortened to 120min without any large-scale instrumentation. This method may be useful for the in-field detection of DP305423× GTS 40-3-2 soybean on a single kernel basis and on-site screening tests of stacked GM soybean lines and individual parent GM soybean lines in highly processed foods.

  11. Unified model for physics-based modelling of a new device architecture: triple material gate oxide stack epitaxial channel profile (TRIMGAS Epi) MOSFET

    NASA Astrophysics Data System (ADS)

    Goel, Kirti; Saxena, Manoj; Gupta, Mridula; Gupta, R. S.

    2007-04-01

    A new device architecture triple material gate oxide stack (TRIMGAS) epitaxial channel (Epi) MOSFET for reduced short channel effects (SCEs) at short gate lengths is proposed. The structure has a gate electrode consisting of three different materials, an oxide stack having high-K material on top of an SiO2 layer and an epitaxial channel profile. A two-dimensional analytical threshold voltage and drain current model has been presented. An analysis of subthreshold slope and I-V characteristics has been done for the first time including all regions of operation. The model proposed is capable of modelling various other MOSFET structures: (a) dual material gate stack (DUMGAS), (b) single material gate stack (SIMGAS), (c) straddle-gate/EJ/side-gate MOSFET oxide stack, (d) dual/hetero material gate (DMG/HMG), (e) single material gate (SMG) and (f) triple material gate (TMG), all with and without an epitaxial channel profile. A 2D device simulator, ATLAS, is used over a wide range of parameters and bias conditions to validate the analytical results.

  12. Differential evolution with ranking-based mutation operators.

    PubMed

    Gong, Wenyin; Cai, Zhihua

    2013-12-01

    Differential evolution (DE) has been proven to be one of the most powerful global numerical optimization algorithms in the evolutionary algorithm family. The core operator of DE is the differential mutation operator. Generally, the parents in the mutation operator are randomly chosen from the current population. In nature, good species always contain good information, and hence, they have more chance to be utilized to guide other species. Inspired by this phenomenon, in this paper, we propose the ranking-based mutation operators for the DE algorithm, where some of the parents in the mutation operators are proportionally selected according to their rankings in the current population. The higher ranking a parent obtains, the more opportunity it will be selected. In order to evaluate the influence of our proposed ranking-based mutation operators on DE, our approach is compared with the jDE algorithm, which is a highly competitive DE variant with self-adaptive parameters, with different mutation operators. In addition, the proposed ranking-based mutation operators are also integrated into other advanced DE variants to verify the effect on them. Experimental results indicate that our proposed ranking-based mutation operators are able to enhance the performance of the original DE algorithm and the advanced DE algorithms.

  13. IAS Stacking Library in IDL

    NASA Astrophysics Data System (ADS)

    Bavouzet, Nicolas; Beelen, Alexandre; Bethermin, Matthieu; Dole, Herve; Ponthieu, Nicolas

    2013-02-01

    This IDL library is designed to be used on astronomical images. Its main aim is to stack data to allow a statistical detection of faint signal, using a prior. For instance, you can stack 160um data using the positions of galaxies detected at 24um or 3.6um, or use WMAP sources to stack Planck data. It can estimate error bars using bootstrap, and it can perform photometry (aperture photometry, or PSF fitting, or other that you can plug). The IAS Stacking Library works with gnomonic projections (RA---TAN), and also with HEALPIX projection.

  14. Stacked insulator induction accelerator gaps

    SciTech Connect

    Houck, T.I.; Westenskow, G.A.; Kim, J.S.; Eylon, S.; Henestroza, E.; Yu, S.S.; Vanecek, D.

    1997-05-01

    Stacked insulators, with alternating layers of insulating material and conducting film, have been shown to support high surface electrical field stresses. We have investigated the application of the stacked insulator technology to the design of induction accelerator modules for the Relativistic-Klystron Two-Beam Accelerator program. The rf properties of the accelerating gaps using stacked insulators, particularly the impedance at frequencies above the beam pipe cutoff frequency, are investigated. Low impedance is critical for Relativistic-Klystron Two-Beam Accelerator applications where a high current, bunched beam is trsnsported through many accelerating gaps. An induction accelerator module designs using a stacked insulator is presented.

  15. 49 CFR 178.815 - Stacking test.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... test IBC; (ii) The calculated superimposed test load weight loaded on either a flat plate or a... their base on level, hard ground and subjected to a uniformly distributed superimposed test load for a..., 11HH2, 21HH1, 21HH2, 31HH1 and 31HH2) which bear the stacking load must be subjected to the test for...

  16. 49 CFR 178.815 - Stacking test.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... test IBC; (ii) The calculated superimposed test load weight loaded on either a flat plate or a... their base on level, hard ground and subjected to a uniformly distributed superimposed test load for a..., 11HH2, 21HH1, 21HH2, 31HH1 and 31HH2) which bear the stacking load must be subjected to the test for...

  17. 49 CFR 178.815 - Stacking test.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... test IBC; (ii) The calculated superimposed test load weight loaded on either a flat plate or a... their base on level, hard ground and subjected to a uniformly distributed superimposed test load for a..., 11HH2, 21HH1, 21HH2, 31HH1 and 31HH2) which bear the stacking load must be subjected to the test for...

  18. 49 CFR 178.606 - Stacking test.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... with specific gravities different from that of the liquid to be transported, the force must be calculated based on the specific gravity that will be marked on the packaging. The minimum height of the... number of containers that, when stacked, reach a height of 3 meters. s = specific gravity of lading....

  19. Comparing vector-based and Bayesian memory models using large-scale datasets: User-generated hashtag and tag prediction on Twitter and Stack Overflow.

    PubMed

    Stanley, Clayton; Byrne, Michael D

    2016-12-01

    The growth of social media and user-created content on online sites provides unique opportunities to study models of human declarative memory. By framing the task of choosing a hashtag for a tweet and tagging a post on Stack Overflow as a declarative memory retrieval problem, 2 cognitively plausible declarative memory models were applied to millions of posts and tweets and evaluated on how accurately they predict a user's chosen tags. An ACT-R based Bayesian model and a random permutation vector-based model were tested on the large data sets. The results show that past user behavior of tag use is a strong predictor of future behavior. Furthermore, past behavior was successfully incorporated into the random permutation model that previously used only context. Also, ACT-R's attentional weight term was linked to an entropy-weighting natural language processing method used to attenuate high-frequency words (e.g., articles and prepositions). Word order was not found to be a strong predictor of tag use, and the random permutation model performed comparably to the Bayesian model without including word order. This shows that the strength of the random permutation model is not in the ability to represent word order, but rather in the way in which context information is successfully compressed. The results of the large-scale exploration show how the architecture of the 2 memory models can be modified to significantly improve accuracy, and may suggest task-independent general modifications that can help improve model fit to human data in a much wider range of domains. (PsycINFO Database Record

  20. Differential geometry based solvation model I: Eulerian formulation.

    PubMed

    Chen, Zhan; Baker, Nathan A; Wei, G W

    2010-11-01

    This paper presents a differential geometry based model for the analysis and computation of the equilibrium property of solvation. Differential geometry theory of surfaces is utilized to define and construct smooth interfaces with good stability and differentiability for use in characterizing the solvent-solute boundaries and in generating continuous dielectric functions across the computational domain. A total free energy functional is constructed to couple polar and nonpolar contributions to the salvation process. Geometric measure theory is employed to rigorously convert a Lagrangian formulation of the surface energy into an Eulerian formulation so as to bring all energy terms into an equal footing. By minimizing the total free energy functional, we derive coupled generalized Poisson-Boltzmann equation (GPBE) and generalized geometric flow equation (GGFE) for the electrostatic potential and the construction of realistic solvent-solute boundaries, respectively. By solving the coupled GPBE and GGFE, we obtain the electrostatic potential, the solvent-solute boundary profile, and the smooth dielectric function, and thereby improve the accuracy and stability of implicit solvation calculations. We also design efficient second order numerical schemes for the solution of the GPBE and GGFE. Matrix resulted from the discretization of the GPBE is accelerated with appropriate preconditioners. An alternative direct implicit (ADI) scheme is designed to improve the stability of solving the GGFE. Two iterative approaches are designed to solve the coupled system of nonlinear partial differential equations. Extensive numerical experiments are designed to validate the present theoretical model, test computational methods, and optimize numerical algorithms. Example solvation analysis of both small compounds and proteins are carried out to further demonstrate the accuracy, stability, efficiency and robustness of the present new model and numerical approaches. Comparison is given to

  1. Differential geometry based solvation model I: Eulerian formulation

    PubMed Central

    Chen, Zhan; Baker, Nathan A.; Wei, G. W.

    2010-01-01

    This paper presents a differential geometry based model for the analysis and computation of the equilibrium property of solvation. Differential geometry theory of surfaces is utilized to define and construct smooth interfaces with good stability and differentiability for use in characterizing the solvent-solute boundaries and in generating continuous dielectric functions across the computational domain. A total free energy functional is constructed to couple polar and nonpolar contributions to the salvation process. Geometric measure theory is employed to rigorously convert a Lagrangian formulation of the surface energy into an Eulerian formulation so as to bring all energy terms into an equal footing. By minimizing the total free energy functional, we derive coupled generalized Poisson-Boltzmann equation (GPBE) and generalized geometric flow equation (GGFE) for the electrostatic potential and the construction of realistic solvent-solute boundaries, respectively. By solving the coupled GPBE and GGFE, we obtain the electrostatic potential, the solvent-solute boundary profile, and the smooth dielectric function, and thereby improve the accuracy and stability of implicit solvation calculations. We also design efficient second order numerical schemes for the solution of the GPBE and GGFE. Matrix resulted from the discretization of the GPBE is accelerated with appropriate preconditioners. An alternative direct implicit (ADI) scheme is designed to improve the stability of solving the GGFE. Two iterative approaches are designed to solve the coupled system of nonlinear partial differential equations. Extensive numerical experiments are designed to validate the present theoretical model, test computational methods, and optimize numerical algorithms. Example solvation analysis of both small compounds and proteins are carried out to further demonstrate the accuracy, stability, efficiency and robustness of the present new model and numerical approaches. Comparison is given to

  2. 2. RICE THRESHING MILL WITH CHIMNEY STACK. Fire burned on ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    2. RICE THRESHING MILL WITH CHIMNEY STACK. Fire burned on top of water pipe at base of chimney stack and steam went thru pipes to boiler on south side of wall. - Mansfield Plantation, Rice Threshing Mill, U.S. Route 701 vicinity, Georgetown, Georgetown County, SC

  3. Zigzag stacks and m-regular linear stacks.

    PubMed

    Chen, William Y C; Guo, Qiang-Hui; Sun, Lisa H; Wang, Jian

    2014-12-01

    The contact map of a protein fold is a graph that represents the patterns of contacts in the fold. It is known that the contact map can be decomposed into stacks and queues. RNA secondary structures are special stacks in which the degree of each vertex is at most one and each arc has length of at least two. Waterman and Smith derived a formula for the number of RNA secondary structures of length n with exactly k arcs. Höner zu Siederdissen et al. developed a folding algorithm for extended RNA secondary structures in which each vertex has maximum degree two. An equation for the generating function of extended RNA secondary structures was obtained by Müller and Nebel by using a context-free grammar approach, which leads to an asymptotic formula. In this article, we consider m-regular linear stacks, where each arc has length at least m and the degree of each vertex is bounded by two. Extended RNA secondary structures are exactly 2-regular linear stacks. For any m ≥ 2, we obtain an equation for the generating function of the m-regular linear stacks. For given m, we deduce a recurrence relation and an asymptotic formula for the number of m-regular linear stacks on n vertices. To establish the equation, we use the reduction operation of Chen, Deng, and Du to transform an m-regular linear stack to an m-reduced zigzag (or alternating) stack. Then we find an equation for m-reduced zigzag stacks leading to an equation for m-regular linear stacks.

  4. Metallorganic chemical vapor deposition and atomic layer deposition approaches for the growth of hafnium-based thin films from dialkylamide precursors for advanced CMOS gate stack applications

    NASA Astrophysics Data System (ADS)

    Consiglio, Steven P.

    To continue the rapid progress of the semiconductor industry as described by Moore's Law, the feasibility of new material systems for front end of the line (FEOL) process technologies needs to be investigated, since the currently employed polysilicon/SiO2-based transistor system is reaching its fundamental scaling limits. Revolutionary breakthroughs in complementary-metal-oxide-semiconductor (CMOS) technology were recently announced by Intel Corporation and International Business Machines Corporation (IBM), with both organizations revealing significant progress in the implementation of hafnium-based high-k dielectrics along with metal gates. This announcement was heralded by Gordon Moore as "...the biggest change in transistor technology since the introduction of polysilicon gate MOS transistors in the late 1960s." Accordingly, the study described herein focuses on the growth of Hf-based dielectrics and Hf-based metal gates using chemical vapor-based deposition methods, specifically metallorganic chemical vapor deposition (MOCVD) and atomic layer deposition (ALD). A family of Hf source complexes that has received much attention recently due to their desirable properties for implementation in wafer scale manufacturing is the Hf dialkylamide precursors. These precursors are room temperature liquids and possess sufficient volatility and desirable decomposition characteristics for both MOCVD and ALD processing. Another benefit of using these sources is the existence of chemically compatible Si dialkylamide sources as co-precursors for use in Hf silicate growth. The first part of this study investigates properties of MOCVD-deposited HfO2 and HfSixOy using dimethylamido Hf and Si precursor sources using a customized MOCVD reactor. The second part of this study involves a study of wet and dry surface pre-treatments for ALD growth of HfO2 using tetrakis(ethylmethylamido)hafnium in a wafer scale manufacturing environment. The third part of this study is an investigation of

  5. Parameter optimization in differential geometry based solvation models

    PubMed Central

    Wang, Bao; Wei, G. W.

    2015-01-01

    Differential geometry (DG) based solvation models are a new class of variational implicit solvent approaches that are able to avoid unphysical solvent-solute boundary definitions and associated geometric singularities, and dynamically couple polar and non-polar interactions in a self-consistent framework. Our earlier study indicates that DG based non-polar solvation model outperforms other methods in non-polar solvation energy predictions. However, the DG based full solvation model has not shown its superiority in solvation analysis, due to its difficulty in parametrization, which must ensure the stability of the solution of strongly coupled nonlinear Laplace-Beltrami and Poisson-Boltzmann equations. In this work, we introduce new parameter learning algorithms based on perturbation and convex optimization theories to stabilize the numerical solution and thus achieve an optimal parametrization of the DG based solvation models. An interesting feature of the present DG based solvation model is that it provides accurate solvation free energy predictions for both polar and non-polar molecules in a unified formulation. Extensive numerical experiment demonstrates that the present DG based solvation model delivers some of the most accurate predictions of the solvation free energies for a large number of molecules. PMID:26450304

  6. Interference between Coulombic and CT-mediated couplings in molecular aggregates: H- to J-aggregate transformation in perylene-based π-stacks

    NASA Astrophysics Data System (ADS)

    Hestand, Nicholas J.; Spano, Frank C.

    2015-12-01

    The spectroscopic differences between J and H-aggregates are traditionally attributed to the spatial dependence of the Coulombic coupling, as originally proposed by Kasha. However, in tightly packed molecular aggregates wave functions on neighboring molecules overlap, leading to an additional charge transfer (CT) mediated exciton coupling with a vastly different spatial dependence. The latter is governed by the nodal patterns of the molecular LUMOs and HOMOs from which the electron (te) and hole (th) transfer integrals derive. The sign of the CT-mediated coupling depends on the sign of the product teth and is therefore highly sensitive to small (sub-Angstrom) transverse displacements or slips. Given that Coulombic and CT-mediated couplings exist simultaneously in tightly packed molecular systems, the interference between the two must be considered when defining J and H-aggregates. Generally, such π-stacked aggregates do not abide by the traditional classification scheme of Kasha: for example, even when the Coulomb coupling is strong the presence of a similarly strong but destructively interfering CT-mediated coupling results in "null-aggregates" which spectroscopically resemble uncoupled molecules. Based on a Frenkel/CT Holstein Hamiltonian that takes into account both sources of electronic coupling as well as intramolecular vibrations, vibronic spectral signatures are developed for integrated Frenkel/CT systems in both the perturbative and resonance regimes. In the perturbative regime, the sign of the lowest exciton band curvature, which rigorously defines J and H-aggregation, is directly tracked by the ratio of the first two vibronic peak intensities. Even in the resonance regime, the vibronic ratio remains a useful tool to evaluate the J or H nature of the system. The theory developed is applied to the reversible H to J-aggregate transformations recently observed in several perylene bisimide systems.

  7. Interference between Coulombic and CT-mediated couplings in molecular aggregates: H- to J-aggregate transformation in perylene-based π-stacks

    SciTech Connect

    Hestand, Nicholas J.; Spano, Frank C.

    2015-12-28

    The spectroscopic differences between J and H-aggregates are traditionally attributed to the spatial dependence of the Coulombic coupling, as originally proposed by Kasha. However, in tightly packed molecular aggregates wave functions on neighboring molecules overlap, leading to an additional charge transfer (CT) mediated exciton coupling with a vastly different spatial dependence. The latter is governed by the nodal patterns of the molecular LUMOs and HOMOs from which the electron (t{sub e}) and hole (t{sub h}) transfer integrals derive. The sign of the CT-mediated coupling depends on the sign of the product t{sub e}t{sub h} and is therefore highly sensitive to small (sub-Angstrom) transverse displacements or slips. Given that Coulombic and CT-mediated couplings exist simultaneously in tightly packed molecular systems, the interference between the two must be considered when defining J and H-aggregates. Generally, such π-stacked aggregates do not abide by the traditional classification scheme of Kasha: for example, even when the Coulomb coupling is strong the presence of a similarly strong but destructively interfering CT-mediated coupling results in “null-aggregates” which spectroscopically resemble uncoupled molecules. Based on a Frenkel/CT Holstein Hamiltonian that takes into account both sources of electronic coupling as well as intramolecular vibrations, vibronic spectral signatures are developed for integrated Frenkel/CT systems in both the perturbative and resonance regimes. In the perturbative regime, the sign of the lowest exciton band curvature, which rigorously defines J and H-aggregation, is directly tracked by the ratio of the first two vibronic peak intensities. Even in the resonance regime, the vibronic ratio remains a useful tool to evaluate the J or H nature of the system. The theory developed is applied to the reversible H to J-aggregate transformations recently observed in several perylene bisimide systems.

  8. Differential Amplifier Circuits Based on Carbon Nanotube Field Effect Transistors (CNTFETs)

    DTIC Science & Technology

    2010-04-01

    Differential Amplifier Circuits Based on Carbon Nanotube Field Effect Transistors ( CNTFETs ) by Matthew Chin and Dr. Stephen Kilpatrick...20783-1197 ARL-TR-5151 April 2010 Differential Amplifier Circuits Based on Carbon Nanotube Field Effect Transistors ( CNTFETs ) Dr...AND SUBTITLE Differential Amplifier Circuits Based on Carbon Nanotube Field Effect Transistors ( CNTFETs ) 5a. CONTRACT NUMBER 5b. GRANT NUMBER

  9. Gender Differentiated Preferences for a Community-Based Conservation Initiative

    PubMed Central

    Keane, Aidan; Gurd, Heather; Kaelo, Dickson; Said, Mohammed Y.; de Leeuw, Jan; Rowcliffe, J. Marcus; Homewood, Katherine

    2016-01-01

    Community-based conservation (CBC) aims to benefit local people as well as to achieve conservation goals, but has been criticised for taking a simplistic view of “community” and failing to recognise differences in the preferences and motivations of community members. We explore this heterogeneity in the context of Kenya’s conservancies, focussing on the livelihood preferences of men and women living adjacent to the Maasai Mara National Reserve. Using a discrete choice experiment we quantify the preferences of local community members for key components of their livelihoods and conservancy design, differentiating between men and women and existing conservancy members and non-members. While Maasai preference for pastoralism remains strong, non-livestock-based livelihood activities are also highly valued and there was substantial differentiation in preferences between individuals. Involvement with conservancies was generally perceived to be positive, but only if households were able to retain some land for other purposes. Women placed greater value on conservancy membership, but substantially less value on wage income, while existing conservancy members valued both conservancy membership and livestock more highly than did non-members. Our findings suggest that conservancies can make a positive contribution to livelihoods, but care must be taken to ensure that they do not unintentionally disadvantage any groups. We argue that conservation should pay greater attention to individual-level differences in preferences when designing interventions in order to achieve fairer and more sustainable outcomes for members of local communities. PMID:27022918

  10. An Enhanced Differential Evolution Algorithm Based on Multiple Mutation Strategies

    PubMed Central

    Xiang, Wan-li; Meng, Xue-lei; An, Mei-qing; Li, Yin-zhen; Gao, Ming-xia

    2015-01-01

    Differential evolution algorithm is a simple yet efficient metaheuristic for global optimization over continuous spaces. However, there is a shortcoming of premature convergence in standard DE, especially in DE/best/1/bin. In order to take advantage of direction guidance information of the best individual of DE/best/1/bin and avoid getting into local trap, based on multiple mutation strategies, an enhanced differential evolution algorithm, named EDE, is proposed in this paper. In the EDE algorithm, an initialization technique, opposition-based learning initialization for improving the initial solution quality, and a new combined mutation strategy composed of DE/current/1/bin together with DE/pbest/bin/1 for the sake of accelerating standard DE and preventing DE from clustering around the global best individual, as well as a perturbation scheme for further avoiding premature convergence, are integrated. In addition, we also introduce two linear time-varying functions, which are used to decide which solution search equation is chosen at the phases of mutation and perturbation, respectively. Experimental results tested on twenty-five benchmark functions show that EDE is far better than the standard DE. In further comparisons, EDE is compared with other five state-of-the-art approaches and related results show that EDE is still superior to or at least equal to these methods on most of benchmark functions. PMID:26609304

  11. Differential equation dynamical system based assessment model in GNSS interoperability

    NASA Astrophysics Data System (ADS)

    Han, Tao; Lu, XiaoChun; Wang, Xue; Rao, YongNan; Zou, DeCai; Yang, JianFei; Wu, YangYang

    2011-06-01

    With the development of Global Navigation Satellite System (GNSS), the idea of GNSS interoperability is born and has become the focus of study in the field of satellite navigation. The popularity for GNSS to augment the interoperability with the existing ones necessitates the study of the assessment algorithm of this idea. In this paper, an assessment algorithm for interoperability comprehensive benefits based on the differential equation dynamical system is discussed. There are two important aspects in GNSS that interoperability will affect: one is the performance advancement; the other one is the cost of adopting interoperability. While researching the complex relationship between the performance and cost, we found this relationship is similar as what between prey and predator in biomathematics, so the Lotka-Volterra model used to depict the prey-predator relationship is a felicitous tool. After building a differential dynamical model, we analyze the existence and stability of the positive equilibrium in the model. Then a Cost-Effective Function of GNSS is constructed based on the positive equilibrium, which is employed to assess the interoperability, qualitatively and quantitatively. Finally, the paper demonstrates the significance of the model and its application by citing a numerical example.

  12. Gender Differentiated Preferences for a Community-Based Conservation Initiative.

    PubMed

    Keane, Aidan; Gurd, Heather; Kaelo, Dickson; Said, Mohammed Y; de Leeuw, Jan; Rowcliffe, J Marcus; Homewood, Katherine

    2016-01-01

    Community-based conservation (CBC) aims to benefit local people as well as to achieve conservation goals, but has been criticised for taking a simplistic view of "community" and failing to recognise differences in the preferences and motivations of community members. We explore this heterogeneity in the context of Kenya's conservancies, focussing on the livelihood preferences of men and women living adjacent to the Maasai Mara National Reserve. Using a discrete choice experiment we quantify the preferences of local community members for key components of their livelihoods and conservancy design, differentiating between men and women and existing conservancy members and non-members. While Maasai preference for pastoralism remains strong, non-livestock-based livelihood activities are also highly valued and there was substantial differentiation in preferences between individuals. Involvement with conservancies was generally perceived to be positive, but only if households were able to retain some land for other purposes. Women placed greater value on conservancy membership, but substantially less value on wage income, while existing conservancy members valued both conservancy membership and livestock more highly than did non-members. Our findings suggest that conservancies can make a positive contribution to livelihoods, but care must be taken to ensure that they do not unintentionally disadvantage any groups. We argue that conservation should pay greater attention to individual-level differences in preferences when designing interventions in order to achieve fairer and more sustainable outcomes for members of local communities.

  13. Differential alkylation-based redox proteomics--Lessons learnt.

    PubMed

    Wojdyla, Katarzyna; Rogowska-Wrzesinska, Adelina

    2015-12-01

    Cysteine is one of the most reactive amino acids. This is due to the electronegativity of sulphur atom in the side chain of thiolate group. It results in cysteine being present in several distinct redox forms inside the cell. Amongst these, reversible oxidations, S-nitrosylation and S-sulfenylation are crucial mediators of intracellular redox signalling, with known associations to health and disease. Study of their functionalities has intensified thanks to the development of various analytical strategies, with particular contribution from differential alkylation-based proteomics methods. Presented here is a critical evaluation of differential alkylation-based strategies for the analysis of S-nitrosylation and S-sulfenylation. The aim is to assess the current status and to provide insights for future directions in the dynamically evolving field of redox proteomics. To achieve that we collected 35 original research articles published since 2010 and analysed them considering the following parameters, (i) resolution of modification site, (ii) quantitative information, including correction of modification levels by protein abundance changes and determination of modification site occupancy, (iii) throughput, including the amount of starting material required for analysis. The results of this meta-analysis are the core of this review, complemented by issues related to biological models and sample preparation in redox proteomics, including conditions for free thiol blocking and labelling of target cysteine oxoforms.

  14. Stacking disorder in ice I.

    PubMed

    Malkin, Tamsin L; Murray, Benjamin J; Salzmann, Christoph G; Molinero, Valeria; Pickering, Steven J; Whale, Thomas F

    2015-01-07

    Traditionally, ice I was considered to exist in two well-defined crystalline forms at ambient pressure: stable hexagonal ice (ice Ih) and metastable cubic ice (ice Ic). However, it is becoming increasingly evident that what has been called cubic ice in the past does not have a structure consistent with the cubic crystal system. Instead, it is a stacking-disordered material containing cubic sequences interlaced with hexagonal sequences, which is termed stacking-disordered ice (ice Isd). In this article, we summarise previous work on ice with stacking disorder including ice that was called cubic ice in the past. We also present new experimental data which shows that ice which crystallises after heterogeneous nucleation in water droplets containing solid inclusions also contains stacking disorder even at freezing temperatures of around -15 °C. This supports the results from molecular simulations, that the structure of ice that crystallises initially from supercooled water is always stacking-disordered and that this metastable ice can transform to the stable hexagonal phase subject to the kinetics of recrystallization. We also show that stacking disorder in ice which forms from water droplets is quantitatively distinct from ice made via other routes. The emerging picture of ice I is that of a very complex material which frequently contains stacking disorder and this stacking disorder can vary in complexity depending on the route of formation and thermal history.

  15. Transcriptome-Based Differentiation of Closely-Related Miscanthus Lines

    DOE PAGES

    Chouvarine, Philippe; Cooksey, Amanda M.; McCarthy, Fiona M.; ...

    2012-01-10

    Distinguishing between individuals is critical to those conducting animal/plant breeding, food safety/quality research, diagnostic and clinical testing, and evolutionary biology studies. Classical genetic identification studies are based on marker polymorphisms, but polymorphism-based techniques are time and labor intensive and often cannot distinguish between closely related individuals. Illumina sequencing technologies provide the detailed sequence data required for rapid and efficient differentiation of related species, lines/cultivars, and individuals in a cost-effective manner. Here we describe the use of Illumina high-throughput exome sequencing, coupled with SNP mapping, as a rapid means of distinguishing between related cultivars of the lignocellulosic bioenergy crop giant miscanthusmore » (Miscanthus6giganteus). We provide the first exome sequence database for Miscanthus species complete with Gene Ontology (GO) functional annotations."« less

  16. Transcriptome-Based Differentiation of Closely-Related Miscanthus Lines

    SciTech Connect

    Chouvarine, Philippe; Cooksey, Amanda M.; McCarthy, Fiona M.; Ray, David A.; Baldwin, Brian S.; Burgess, Shane C.; Peterson, Daniel G.

    2012-01-10

    Distinguishing between individuals is critical to those conducting animal/plant breeding, food safety/quality research, diagnostic and clinical testing, and evolutionary biology studies. Classical genetic identification studies are based on marker polymorphisms, but polymorphism-based techniques are time and labor intensive and often cannot distinguish between closely related individuals. Illumina sequencing technologies provide the detailed sequence data required for rapid and efficient differentiation of related species, lines/cultivars, and individuals in a cost-effective manner. Here we describe the use of Illumina high-throughput exome sequencing, coupled with SNP mapping, as a rapid means of distinguishing between related cultivars of the lignocellulosic bioenergy crop giant miscanthus (Miscanthus6giganteus). We provide the first exome sequence database for Miscanthus species complete with Gene Ontology (GO) functional annotations."

  17. 49 CFR 178.815 - Stacking test.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 49 Transportation 3 2013-10-01 2013-10-01 false Stacking test. 178.815 Section 178.815... Stacking test. (a) General. The stacking test must be conducted for the qualification of all IBC design types intended to be stacked. (b) Special preparation for the stacking test. (1) All IBCs...

  18. Differential geometry based solvation model. III. Quantum formulation.

    PubMed

    Chen, Zhan; Wei, Guo-Wei

    2011-11-21

    Solvation is of fundamental importance to biomolecular systems. Implicit solvent models, particularly those based on the Poisson-Boltzmann equation for electrostatic analysis, are established approaches for solvation analysis. However, ad hoc solvent-solute interfaces are commonly used in the implicit solvent theory. Recently, we have introduced differential geometry based solvation models which allow the solvent-solute interface to be determined by the variation of a total free energy functional. Atomic fixed partial charges (point charges) are used in our earlier models, which depends on existing molecular mechanical force field software packages for partial charge assignments. As most force field models are parameterized for a certain class of molecules or materials, the use of partial charges limits the accuracy and applicability of our earlier models. Moreover, fixed partial charges do not account for the charge rearrangement during the solvation process. The present work proposes a differential geometry based multiscale solvation model which makes use of the electron density computed directly from the quantum mechanical principle. To this end, we construct a new multiscale total energy functional which consists of not only polar and nonpolar solvation contributions, but also the electronic kinetic and potential energies. By using the Euler-Lagrange variation, we derive a system of three coupled governing equations, i.e., the generalized Poisson-Boltzmann equation for the electrostatic potential, the generalized Laplace-Beltrami equation for the solvent-solute boundary, and the Kohn-Sham equations for the electronic structure. We develop an iterative procedure to solve three coupled equations and to minimize the solvation free energy. The present multiscale model is numerically validated for its stability, consistency and accuracy, and is applied to a few sets of molecules, including a case which is difficult for existing solvation models. Comparison is made

  19. Differential membrane-based nanocalorimeter for high-resolution measurements of low-temperature specific heat.

    PubMed

    Tagliati, S; Krasnov, V M; Rydh, A

    2012-05-01

    A differential, membrane-based nanocalorimeter for general specific heat studies of very small samples, ranging from 0.5 mg to sub-μg in mass, is described. The calorimeter operates over the temperature range from above room temperature down to 0.5 K. It consists of a pair of cells, each of which is a stack of heaters and thermometer in the center of a silicon nitride membrane, in total giving a background heat capacity less than 100 nJ/K at 300 K, decreasing to 10 pJ/K at 1 K. The device has several distinctive features: (i) The resistive thermometer, made of a Ge(1 - x)Au(x) alloy, displays a high dimensionless sensitivity ∣dlnR∕dlnT∣ ≳ 1 over the entire temperature range. (ii) The sample is placed in direct contact with the thermometer, which is allowed to self-heat. The thermometer can thus be operated at high dc current to increase the resolution. (iii) Data are acquired with a set of eight synchronized lock-in amplifiers measuring dc, 1st and 2nd harmonic signals of heaters and thermometer. This gives high resolution and allows continuous output adjustments without additional noise. (iv) Absolute accuracy is achieved via a variable-frequency-fixed-phase technique in which the measurement frequency is automatically adjusted during the measurements to account for the temperature variation of the sample heat capacity and the device thermal conductance. The performance of the calorimeter is illustrated by studying the heat capacity of a small Au sample and the specific heat of a 2.6 μg piece of superconducting Pb in various magnetic fields.

  20. Multistage Force Amplification of Piezoelectric Stacks

    NASA Technical Reports Server (NTRS)

    Xu, Tian-Bing (Inventor); Siochi, Emilie J. (Inventor); Zuo, Lei (Inventor); Jiang, Xiaoning (Inventor); Kang, Jin Ho (Inventor)

    2015-01-01

    Embodiments of the disclosure include an apparatus and methods for using a piezoelectric device, that includes an outer flextensional casing, a first cell and a last cell serially coupled to each other and coupled to the outer flextensional casing such that each cell having a flextensional cell structure and each cell receives an input force and provides an output force that is amplified based on the input force. The apparatus further includes a piezoelectric stack coupled to each cell such that the piezoelectric stack of each cell provides piezoelectric energy based on the output force for each cell. Further, the last cell receives an input force that is the output force from the first cell and the last cell provides an output apparatus force In addition, the piezoelectric energy harvested is based on the output apparatus force. Moreover, the apparatus provides displacement based on the output apparatus force.

  1. Differential equation based method for accurate approximations in optimization

    NASA Technical Reports Server (NTRS)

    Pritchard, Jocelyn I.; Adelman, Howard M.

    1990-01-01

    This paper describes a method to efficiently and accurately approximate the effect of design changes on structural response. The key to this new method is to interpret sensitivity equations as differential equations that may be solved explicitly for closed form approximations, hence, the method is denoted the Differential Equation Based (DEB) method. Approximations were developed for vibration frequencies, mode shapes and static displacements. The DEB approximation method was applied to a cantilever beam and results compared with the commonly-used linear Taylor series approximations and exact solutions. The test calculations involved perturbing the height, width, cross-sectional area, tip mass, and bending inertia of the beam. The DEB method proved to be very accurate, and in msot cases, was more accurate than the linear Taylor series approximation. The method is applicable to simultaneous perturbation of several design variables. Also, the approximations may be used to calculate other system response quantities. For example, the approximations for displacement are used to approximate bending stresses.

  2. Optimal control of complex networks based on matrix differentiation

    NASA Astrophysics Data System (ADS)

    Li, Guoqi; Ding, Jie; Wen, Changyun; Pei, Jing

    2016-09-01

    Finding the key node set to be connected to external control sources so as to minimize the energy for controlling a complex network, known as the minimum-energy control problem, is of critical importance but remains open. We address this critical problem where matrix differentiation is involved. To this end, the differentiation of energy/cost function with respect to the input matrix is obtained based on tensor analysis, and the Hessian matrix is compressed from a fourth-order tensor. Normalized projected gradient method (NPGM) normalized projected trust-region method (NPTM) are proposed with established convergence property. We show that NPGM is more computationally efficient than NPTM. Simulation results demonstrate satisfactory performance of the algorithms, and reveal important insights as well. Two interesting phenomena are observed. One is that the key node set tends to divide elementary paths equally. The other is that the low-degree nodes may be more important than hubs from a control point of view, indicating that controlling hub nodes does not help to lower the control energy. These results suggest a way of achieving optimal control of complex networks, and provide meaningful insights for future researches.

  3. Stacking for machine learning redshifts applied to SDSS galaxies

    NASA Astrophysics Data System (ADS)

    Zitlau, Roman; Hoyle, Ben; Paech, Kerstin; Weller, Jochen; Rau, Markus Michael; Seitz, Stella

    2016-08-01

    We present an analysis of a general machine learning technique called `stacking' for the estimation of photometric redshifts. Stacking techniques can feed the photometric redshift estimate, as output by a base algorithm, back into the same algorithm as an additional input feature in a subsequent learning round. We show how all tested base algorithms benefit from at least one additional stacking round (or layer). To demonstrate the benefit of stacking, we apply the method to both unsupervised machine learning techniques based on self-organizing maps (SOMs), and supervised machine learning methods based on decision trees. We explore a range of stacking architectures, such as the number of layers and the number of base learners per layer. Finally we explore the effectiveness of stacking even when using a successful algorithm such as AdaBoost. We observe a significant improvement of between 1.9 per cent and 21 per cent on all computed metrics when stacking is applied to weak learners (such as SOMs and decision trees). When applied to strong learning algorithms (such as AdaBoost) the ratio of improvement shrinks, but still remains positive and is between 0.4 per cent and 2.5 per cent for the explored metrics and comes at almost no additional computational cost.

  4. When is stacking confusing? The impact of confusion on stacking in deep H I galaxy surveys

    NASA Astrophysics Data System (ADS)

    Jones, Michael G.; Haynes, Martha P.; Giovanelli, Riccardo; Papastergis, Emmanouil

    2016-01-01

    We present an analytic model to predict the H I mass contributed by confused sources to a stacked spectrum in a generic H I survey. Based on the ALFALFA (Arecibo Legacy Fast ALFA) correlation function, this model is in agreement with the estimates of confusion present in stacked Parkes telescope data, and was used to predict how confusion will limit stacking in the deepest Square Kilometre Array precursor H I surveys. Stacking with LADUMA (Looking At the Distant Universe with MeerKAT) and DINGO UDEEP (Deep Investigation of Neutral Gas Origins - Ultra Deep) data will only be mildly impacted by confusion if their target synthesized beam size of 10 arcsec can be achieved. Any beam size significantly above this will result in stacks that contain a mass in confused sources that is comparable to (or greater than) that which is detectable via stacking, at all redshifts. CHILES (COSMOS H I Large Extragalactic Survey) 5 arcsec resolution is more than adequate to prevent confusion influencing stacking of its data, throughout its bandpass range. FAST (Five hundred metre Aperture Spherical Telescope) will be the most impeded by confusion, with H I surveys likely becoming heavily confused much beyond z = 0.1. The largest uncertainties in our model are the redshift evolution of the H I density of the Universe and the H I correlation function. However, we argue that the two idealized cases we adopt should bracket the true evolution, and the qualitative conclusions are unchanged regardless of the model choice. The profile shape of the signal due to confusion (in the absence of any detection) was also modelled, revealing that it can take the form of a double Gaussian with a narrow and wide component.

  5. Role of surface-reaction layer in HBr/fluorocarbon-based plasma with nitrogen addition formed by high-aspect-ratio etching of polycrystalline silicon and SiO2 stacks

    NASA Astrophysics Data System (ADS)

    Iwase, Taku; Matsui, Miyako; Yokogawa, Kenetsu; Arase, Takao; Mori, Masahito

    2016-06-01

    The etching of polycrystalline silicon (poly-Si)/SiO2 stacks by using VHF plasma was studied for three-dimensional NAND fabrication. One critical goal is achieving both a vertical profile and high throughput for multiple-stack etching. While the conventional process consists of multiple steps for each stacked layer, in this study, HBr/fluorocarbon-based gas chemistry was investigated to achieve a single-step etching process to reduce process time. By analyzing the dependence on wafer temperature, we improved both the etching profile and rate at a low temperature. The etching mechanism is examined considering the composition of the surface reaction layer. X-ray photoelectron spectroscopy (XPS) analysis revealed that the adsorption of N-H and Br was enhanced at a low temperature, resulting in a reduced carbon-based-polymer thickness and enhanced Si etching. Finally, a vertical profile was obtained as a result of the formation of a thin and reactive surface-reaction layer at a low wafer temperature.

  6. Stacked resistive switches for AND/OR logic gates

    NASA Astrophysics Data System (ADS)

    Kim, Myung Ju; Son, Kyung Rock; Park, Ju Hyun; Kim, Tae Geun

    2017-06-01

    This paper reports the use of stacked resistive switches as logic gates for implementing the ;AND; and ;OR; operations. These stacked resistive switches consist of two resistive switches that share a middle electrode, and they operate based on the difference in resistance between the low and high resistance states indicating the logical states of ;0; and ;1;, respectively. The stacked resistive switches can perform either AND or OR operation, using two read schemes in one device. To perform the AND (or OR) operation, two resistive switches are arranged in a serial (or parallel) connection. AND and OR operations have been successfully demonstrated using the stacked resistive switches. The use of stacked resistive switches as logic gates that utilize the advantages of memristive devices shows the possibility of stateful logic circuits.

  7. A shape representation for computer vision based on differential topology.

    PubMed

    Blicher, A P

    1995-01-01

    We describe a shape representation for use in computer vision, after a brief review of shape representation and object recognition in general. Our shape representation is based on graph structures derived from level sets whose characteristics are understood from differential topology, particularly singularity theory. This leads to a representation which is both stable and whose changes under deformation are simple. The latter allows smoothing in the representation domain ('symbolic smoothing'), which in turn can be used for coarse-to-fine strategies, or as a discrete analog of scale space. Essentially the same representation applies to an object embedded in 3-dimensional space as to one in the plane, and likewise for a 3D object and its silhouette. We suggest how this can be used for recognition.

  8. Development of internal reforming carbonate fuel cell stack technology

    SciTech Connect

    Farooque, M.

    1990-10-01

    Activities under this contract focused on the development of a coal-fueled carbonate fuel cell system design and the stack technology consistent with the system design. The overall contract effort was divided into three phases. The first phase, completed in January 1988, provided carbonate fuel cell component scale-up from the 1ft{sup 2} size to the commercial 4ft{sup 2} size. The second phase of the program provided the coal-fueled carbonate fuel cell system (CGCFC) conceptual design and carried out initial research and development needs of the CGCFC system. The final phase of the program emphasized stack height scale-up and improvement of stack life. The results of the second and third phases are included in this report. Program activities under Phase 2 and 3 were designed to address several key development areas to prepare the carbonate fuel cell system, particularly the coal-fueled CFC power plant, for commercialization in late 1990's. The issues addressed include: Coal-Gas Related Considerations; Cell and Stack Technology Improvement; Carbonate Fuel Cell Stack Design Development; Stack Tests for Design Verification; Full-Size Stack Design; Test Facility Development; Carbonate Fuel Cell Stack Cost Assessment; and Coal-Fueled Carbonate Fuel Cell System Design. All the major program objectives in each of the topical areas were successfully achieved. This report is organized along the above-mentioned topical areas. Each topical area has been processed separately for inclusion on the data base.

  9. Transcriptome-Based Differentiation of Closely-Related Miscanthus Lines

    PubMed Central

    Chouvarine, Philippe; Cooksey, Amanda M.; McCarthy, Fiona M.; Ray, David A.; Baldwin, Brian S.

    2012-01-01

    Background Distinguishing between individuals is critical to those conducting animal/plant breeding, food safety/quality research, diagnostic and clinical testing, and evolutionary biology studies. Classical genetic identification studies are based on marker polymorphisms, but polymorphism-based techniques are time and labor intensive and often cannot distinguish between closely related individuals. Illumina sequencing technologies provide the detailed sequence data required for rapid and efficient differentiation of related species, lines/cultivars, and individuals in a cost-effective manner. Here we describe the use of Illumina high-throughput exome sequencing, coupled with SNP mapping, as a rapid means of distinguishing between related cultivars of the lignocellulosic bioenergy crop giant miscanthus (Miscanthus × giganteus). We provide the first exome sequence database for Miscanthus species complete with Gene Ontology (GO) functional annotations. Results A SNP comparative analysis of rhizome-derived cDNA sequences was successfully utilized to distinguish three Miscanthus × giganteus cultivars from each other and from other Miscanthus species. Moreover, the resulting phylogenetic tree generated from SNP frequency data parallels the known breeding history of the plants examined. Some of the giant miscanthus plants exhibit considerable sequence divergence. Conclusions Here we describe an analysis of Miscanthus in which high-throughput exome sequencing was utilized to differentiate between closely related genotypes despite the current lack of a reference genome sequence. We functionally annotated the exome sequences and provide resources to support Miscanthus systems biology. In addition, we demonstrate the use of the commercial high-performance cloud computing to do computational GO annotation. PMID:22253803

  10. Differential geometry based solvation model II: Lagrangian formulation

    PubMed Central

    Chen, Zhan; Baker, Nathan A.; Wei, G. W.

    2010-01-01

    Solvation is an elementary process in nature and is of paramount importance to more sophisticated chemical, biological and biomolecular processes. The understanding of solvation is an essential prerequisite for the quantitative description and analysis of biomolecular systems. This work presents a Lagrangian formulation of our differential geometry based solvation model. The Lagrangian representation of biomolecular surfaces has a few utilities/advantages. First, it provides an essential basis for biomolecular visualization, surface electrostatic potential map and visual perception of biomolecules. Additionally, it is consistent with the conventional setting of implicit solvent theories and thus, many existing theoretical algorithms and computational software packages can be directly employed. Finally, the Lagrangian representation does not need to resort to artificially enlarged van der Waals radii as often required by the Eulerian representation in solvation analysis. The main goal of the present work is to analyze the connection, similarity and difference between the Eulerian and Lagrangian formalisms of the solvation model. Such analysis is important to the understanding of the differential geometry based solvation model. The present model extends the scaled particle theory (SPT) of nonpolar solvation model with a solvent-solute interaction potential. The nonpolar solvation model is completed with a Poisson-Boltzmann (PB) theory based polar solvation model. The differential geometry theory of surfaces is employed to provide a natural description of solvent-solute interfaces. The minimization of the total free energy functional, which encompasses the polar and nonpolar contributions, leads to coupled potential driven geometric flow and Poisson-Boltzmann equations. Due to the development of singularities and nonsmooth manifolds in the Lagrangian representation, the resulting potential-driven geometric flow equation is embedded into the Eulerian representation for

  11. Differential geometry based solvation model II: Lagrangian formulation.

    PubMed

    Chen, Zhan; Baker, Nathan A; Wei, G W

    2011-12-01

    Solvation is an elementary process in nature and is of paramount importance to more sophisticated chemical, biological and biomolecular processes. The understanding of solvation is an essential prerequisite for the quantitative description and analysis of biomolecular systems. This work presents a Lagrangian formulation of our differential geometry based solvation models. The Lagrangian representation of biomolecular surfaces has a few utilities/advantages. First, it provides an essential basis for biomolecular visualization, surface electrostatic potential map and visual perception of biomolecules. Additionally, it is consistent with the conventional setting of implicit solvent theories and thus, many existing theoretical algorithms and computational software packages can be directly employed. Finally, the Lagrangian representation does not need to resort to artificially enlarged van der Waals radii as often required by the Eulerian representation in solvation analysis. The main goal of the present work is to analyze the connection, similarity and difference between the Eulerian and Lagrangian formalisms of the solvation model. Such analysis is important to the understanding of the differential geometry based solvation model. The present model extends the scaled particle theory of nonpolar solvation model with a solvent-solute interaction potential. The nonpolar solvation model is completed with a Poisson-Boltzmann (PB) theory based polar solvation model. The differential geometry theory of surfaces is employed to provide a natural description of solvent-solute interfaces. The optimization of the total free energy functional, which encompasses the polar and nonpolar contributions, leads to coupled potential driven geometric flow and PB equations. Due to the development of singularities and nonsmooth manifolds in the Lagrangian representation, the resulting potential-driven geometric flow equation is embedded into the Eulerian representation for the purpose of

  12. Bearing diagnostics: A method based on differential geometry

    NASA Astrophysics Data System (ADS)

    Tian, Ye; Wang, Zili; Lu, Chen; Wang, Zhipeng

    2016-12-01

    The structures around bearings are complex, and the working environment is variable. These conditions cause the collected vibration signals to become nonlinear, non-stationary, and chaotic characteristics that make noise reduction, feature extraction, fault diagnosis, and health assessment significantly challenging. Thus, a set of differential geometry-based methods with superiorities in nonlinear analysis is presented in this study. For noise reduction, the Local Projection method is modified by both selecting the neighborhood radius based on empirical mode decomposition and determining noise subspace constrained by neighborhood distribution information. For feature extraction, Hessian locally linear embedding is introduced to acquire manifold features from the manifold topological structures, and singular values of eigenmatrices as well as several specific frequency amplitudes in spectrograms are extracted subsequently to reduce the complexity of the manifold features. For fault diagnosis, information geometry-based support vector machine is applied to classify the fault states. For health assessment, the manifold distance is employed to represent the health information; the Gaussian mixture model is utilized to calculate the confidence values, which directly reflect the health status. Case studies on Lorenz signals and vibration datasets of bearings demonstrate the effectiveness of the proposed methods.

  13. Pi-Stack Engineering of Semiconducting Perylene Tetracarboxylic Derivatives

    NASA Astrophysics Data System (ADS)

    Xue, Chenming

    D crystalline intra-layer order. Chapter 4, PDI pi-stacking order has been engineered in the crystalline phase. By introducing two structuring factors, a series of crystalline PDIs with finely tunable PDI pi-stacking order was obtained. The crystalline PDIs with exceptionally red-shifted lambda max were obtained. Several PDIs possess lambdamax values greater than any literature-reported ones. These materials can be excellent candidates in solar cell devices. In Chapter 5, new chiral main-chain PDI containing polymers were synthesized. These polymers can form intramolecular helical pi-stacks in diluted solutions. In Chapter 6, a novel synthetic route leading to unsymmetrical perylene tetracarboxylic derivatives has been developed. Based on this synthetic method, more perylene tetracarboxylic derivatives can be generated. In my research in this thesis, not only synthesis is an important part because it provides novel materials, but the characterization is critical as well. Infrared spectroscopy, Ultra-violet, fluorescence, differential scanning calorimetry, circular dichroism, polarized light microscopy, gel permeation chromatography, X-ray diffraction including both small angle and wide angle have been used. Additionally, molecular simulation is also very useful in design and obtaining details in molecular packing. Overall, the achievements in this research contribute a considerable advance in the field of generating semiconducting perylene tetracarboxylic derivatives which have versatile potential applications such as in solar cell devices, organic field effect transistors and light emitting diodes.

  14. Local nature of substituent effects in stacking interactions.

    PubMed

    Wheeler, Steven E

    2011-07-06

    Popular explanations of substituent effects in π-stacking interactions hinge upon substituent-induced changes in the aryl π-system. This entrenched view has been used to explain substituent effects in countless stacking interactions over the past 2 decades. However, for a broad range of stacked dimers, it is shown that substituent effects are better described as arising from local, direct interactions of the substituent with the proximal vertex of the other ring. Consequently, substituent effects in stacking interactions are additive, regardless of whether the substituents are on the same or opposite rings. Substituent effects are also insensitive to the introduction of heteroatoms on distant parts of either stacked ring. This local, direct interaction viewpoint provides clear, unambiguous explanations of substituent effects for myriad stacking interactions that are in accord with robust computational data, including DFT-D and new benchmark CCSD(T) results. Many of these computational results cannot be readily explained using traditional π-polarization-based models. Analyses of stacking interactions based solely on the sign of the electrostatic potential above the face of an aromatic ring or the molecular quadrupole moment face a similar fate. The local, direct interaction model provides a simple means of analyzing substituent effects in complex aromatic systems and also offers simple explanations of the crystal packing of fluorinated benzenes and the recently published dependence of the stability of protein-RNA complexes on the regiochemistry of fluorinated base analogues [J. Am. Chem. Soc.2011, 133, 3687-3689].

  15. Stacked Learning to Search for Scene Labeling.

    PubMed

    Cheng, Feiyang; He, Xuming; Zhang, Hong

    2017-02-13

    Search-based structured prediction methods have shown promising successes in both computer vision and natural language processing recently. However, most existing search-based approaches lead to a complex multi-stage learning process, which is ill-suited for scene labeling problems with a high-dimensional output space. In this paper, a stacked learning to search method is proposed to address scene labeling tasks. We design a simplified search process consisting of a sequence of ranking functions, which are learned based on a stacked learning strategy to prevent over-fitting. Our method is able to encode rich prior knowledge by incorporating a variety of local and global scene features. In addition, we estimate a labeling confidence map to further improve the search efficiency from two aspects: first, it constrains the search space more effectively by pruning out low-quality solutions based on confidence scores; second, we employ the confidence map as an additional ranking feature to improve its prediction performance and thus reduce the search steps. Our approach is evaluated on both semantic segmentation and geometric labeling tasks, including the Stanford Background, Sift Flow, Geometric Context and NYUv2 RGB-D dataset. The competitive results demonstrate that our stacked learning to search method provides an effective alternative paradigm for scene labeling.

  16. Stacking of colors in exfoliable plasmonic superlattices.

    PubMed

    Jalali, Mahsa; Yu, Ye; Xu, Kaichen; Ng, Ray J H; Dong, Zhaogang; Wang, Liancheng; Safari Dinachali, Saman; Hong, Minghui; Yang, Joel K W

    2016-10-27

    Color printing with plasmonic resonators can overcome limitations in pigment-based printing approaches. While layering in pigment-based prints results in familiar color mixing effects, the color effects of stacking plasmonic resonator structures have not been investigated. Here, we demonstrate an experimental strategy to fabricate a 3-tiered complex superlattice of nanostructures with multiple sets of building blocks. Laser interference lithography was used to fabricate the nanostructures and a thin-layer of aluminum was deposited to introduce plasmonic colors. Interestingly, the structures exhibited drastic color changes when the layers of structures were sequentially exfoliated. Our theoretical analysis shows that the colors of the superlattice nanostructure were predominantly determined by the plasmonic properties of the two topmost layers. These results suggest the feasibility of the sub-wavelength vertical stacking of multiple plasmonic colors for applications in sensitive tamper-evident seals, dense 3D barcoding, and substrates for plasmonic color laser printing.

  17. Deposition temperature dependence of material and Si surface passivation properties of O{sub 3}-based atomic layer deposited Al{sub 2}O{sub 3}-based films and stacks

    SciTech Connect

    Bordihn, Stefan; Mertens, Verena; Müller, Jörg W.; Kessels, W. M. M.

    2014-01-15

    The material composition and the Si surface passivation of aluminum oxide (Al{sub 2}O{sub 3}) films prepared by atomic layer deposition using Al(CH{sub 3}){sub 3} and O{sub 3} as precursors were investigated for deposition temperatures (T{sub Dep}) between 200 °C and 500 °C. The growth per cycle decreased with increasing deposition temperature due to a lower Al deposition rate. In contrast the material composition was hardly affected except for the hydrogen concentration, which decreased from [H] = 3 at. % at 200 °C to [H] < 0.5 at. % at 400 °C and 500 °C. The surface passivation performance was investigated after annealing at 300 °C–450 °C and also after firing steps in the typical temperature range of 800 °C–925 °C. A similar high level of the surface passivation performance, i.e., surface recombination velocity values <10 cm/s, was obtained after annealing and firing. Investigations of Al{sub 2}O{sub 3}/SiN{sub x} stacks complemented the work and revealed similar levels of surface passivation as single-layer Al{sub 2}O{sub 3} films, both for the chemical and field-effect passivation. The fixed charge density in the Al{sub 2}O{sub 3}/SiN{sub x} stacks, reflecting the field-effect passivation, was reduced by one order of magnitude from 3·10{sup 12} cm{sup −2} to 3·10{sup 11} cm{sup −2} when T{sub Dep} was increased from 300 °C to 500 °C. The level of the chemical passivation changed as well, but the total level of the surface passivation was hardly affected by the value of T{sub Dep}. When firing films prepared at of low T{sub Dep}, blistering of the films occurred and this strongly reduced the surface passivation. These results presented in this work demonstrate that a high level of surface passivation can be achieved for Al{sub 2}O{sub 3}-based films and stacks over a wide range of conditions when the combination of deposition temperature and annealing or firing temperature is carefully chosen.

  18. Satellite power using magnetically suspended flywheel stack

    NASA Technical Reports Server (NTRS)

    Kirk, James A.; Anand, Davinder K.

    1987-01-01

    Research activities with magnetically suspended flywheels are reported. The purpose of the effort is to critically examine and further the development of all the key technologies which impact the inertial energy storage system. The results presented discuss the concept of a magnetically suspended flywheel as it applies to a 500 Watt-hour energy storage system. The proposed system is currently under hardware development and is based upon two pancake magnetic bearings arranged in a vertical stack.

  19. Differential thiol-based switches jumpstart Vibrio cholerae pathogenesis

    PubMed Central

    Liu, Zhi; Wang, Hui; Zhou, Zhigang; Naseer, Nawar; Xiang, Fu; Kan, Biao; Goulian, Mark; Zhu, Jun

    2015-01-01

    Bacterial pathogens utilize gene expression versatility to adapt to environmental changes. Vibrio cholerae, the causative agent of cholera, encounters redox potential changes when it transitions from oxygen-rich aquatic reservoirs to the oxygen-limiting human gastrointestinal tract. We previously showed that the virulence regulator AphB uses thiol-based switches to sense the anoxic host environment and transcriptionally activate the key virulence activator tcpP. Here, by performing a high-throughput transposon sequencing screen in vivo, we identified OhrR as another regulator that enables V. cholerae rapid anoxic adaptation. Like AphB, reduced OhrR binds to and regulates the tcpP promoter. OhrR and AphB displayed differential dynamics in response to redox potential changes: OhrR is reduced more rapidly than AphB. Furthermore, OhrR thiol modification is required for rapid activation of virulence and successful colonization. This reveals a mechanism whereby bacterial pathogens employ posttranslational modifications of multiple transcription factors to sense and adapt to dynamic environmental changes. PMID:26748713

  20. 49 CFR 178.1055 - Stacking test.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 49 Transportation 3 2013-10-01 2013-10-01 false Stacking test. 178.1055 Section 178.1055... Containers § 178.1055 Stacking test. (a) General. The stacking test must be conducted for the qualification of all Flexible Bulk Containers design types. (b) Special preparation for the stacking test....

  1. GPU-based parallel clustered differential pulse code modulation

    NASA Astrophysics Data System (ADS)

    Wu, Jiaji; Li, Wenze; Kong, Wanqiu

    2015-10-01

    Hyperspectral remote sensing technology is widely used in marine remote sensing, geological exploration, atmospheric and environmental remote sensing. Owing to the rapid development of hyperspectral remote sensing technology, resolution of hyperspectral image has got a huge boost. Thus data size of hyperspectral image is becoming larger. In order to reduce their saving and transmission cost, lossless compression for hyperspectral image has become an important research topic. In recent years, large numbers of algorithms have been proposed to reduce the redundancy between different spectra. Among of them, the most classical and expansible algorithm is the Clustered Differential Pulse Code Modulation (CDPCM) algorithm. This algorithm contains three parts: first clusters all spectral lines, then trains linear predictors for each band. Secondly, use these predictors to predict pixels, and get the residual image by subtraction between original image and predicted image. Finally, encode the residual image. However, the process of calculating predictors is timecosting. In order to improve the processing speed, we propose a parallel C-DPCM based on CUDA (Compute Unified Device Architecture) with GPU. Recently, general-purpose computing based on GPUs has been greatly developed. The capacity of GPU improves rapidly by increasing the number of processing units and storage control units. CUDA is a parallel computing platform and programming model created by NVIDIA. It gives developers direct access to the virtual instruction set and memory of the parallel computational elements in GPUs. Our core idea is to achieve the calculation of predictors in parallel. By respectively adopting global memory, shared memory and register memory, we finally get a decent speedup.

  2. Graphanes: Sheets and stacking under pressure

    SciTech Connect

    Wen, Xiao-Dong; Hand, Louis; Labet, Vanessa; Yang, Tao; Hoffmann, Roald; Ashcroft, N. W.; Oganov, Artem R.; Lyakhov, Andriy O.

    2011-04-26

    Eight isomeric two-dimensional graphane sheets are found in a theoretical study. Four of these nets—two built on chair cyclohexanes, two on boat—are more stable thermodynamically than the isomeric benzene, or polyacetylene. Three-dimensional crystals are built up from the two-dimensional sheets, and their hypothetical behavior under pressure (up to 300 GPa) is explored. While the three-dimensional graphanes remain, as expected, insulating or semiconducting in this pressure range, there is a remarkable inversion in stability of the five crystals studied. Two stacking polytypes that are not the most stable at ambient pressure (one based on an unusual chair cyclohexane net, the other on a boat) are significantly stabilized with increasing pressure relative to stackings of simple chair sheets. The explanation may lie in the balance on intra and intersheet contacts in the extended arrays.

  3. Module Based Differential Coexpression Analysis Method for Type 2 Diabetes

    PubMed Central

    Yuan, Lin; Zheng, Chun-Hou; Xia, Jun-Feng; Huang, De-Shuang

    2015-01-01

    More and more studies have shown that many complex diseases are contributed jointly by alterations of numerous genes. Genes often coordinate together as a functional biological pathway or network and are highly correlated. Differential coexpression analysis, as a more comprehensive technique to the differential expression analysis, was raised to research gene regulatory networks and biological pathways of phenotypic changes through measuring gene correlation changes between disease and normal conditions. In this paper, we propose a gene differential coexpression analysis algorithm in the level of gene sets and apply the algorithm to a publicly available type 2 diabetes (T2D) expression dataset. Firstly, we calculate coexpression biweight midcorrelation coefficients between all gene pairs. Then, we select informative correlation pairs using the “differential coexpression threshold” strategy. Finally, we identify the differential coexpression gene modules using maximum clique concept and k-clique algorithm. We apply the proposed differential coexpression analysis method on simulated data and T2D data. Two differential coexpression gene modules about T2D were detected, which should be useful for exploring the biological function of the related genes. PMID:26339648

  4. Generalization of the H - κ stacking method to anisotropic media

    NASA Astrophysics Data System (ADS)

    Kaviani, Ayoub; Rümpker, Georg

    2015-04-01

    The effect of anisotropy on the estimates of crustal thickness H and average bulk vP/vS-ratio κ can be significant in the presence of strong seismic anisotropy. Here we extend the stacking approach of Zhu and Kanamori (2000) to include all twenty P-to-S converted phases and their crustal reverberations that are generated in the anisotropic case - instead of only five phases in the isotropic case. The ray-based algorithm of Frederiksen and Bostock (2000) is used to calculate the amplitude and arrival time of each phase. Synthetic tests are performed to investigate the feasibility and robustness of the stacking approach. For simplicity, we assume hexagonal symmetry and a horizontal symmetry axis but more general anisotropy may be considered. The tests reveal that the estimates of H and κ can be significantly affected by the presence of crustal anisotropy. We verify the feasibility of the stacking approach for real data by applying the method to examples from three different tectonic regions. The results show that the anisotropic stacking scheme presented here can provide much better constraints on the estimation of H and κ in comparison to the isotropic stacking. The anisotropic stacking can also help to resolve ambiguities in the determination of H and κ when several maxima of stacked receiver-function amplitudes arise in cases of complex crustal structure.

  5. Six-band terahertz metamaterial absorber based on the combination of multiple-order responses of metallic patches in a dual-layer stacked resonance structure

    PubMed Central

    Wang, Ben-Xin; Wang, Gui-Zhen; Sang, Tian; Wang, Ling-Ling

    2017-01-01

    This paper reports on a numerical study of the six-band metamaterial absorber composed of two alternating stack of metallic-dielectric layers on top of a continuous metallic plane. Six obvious resonance peaks with high absorption performance (average larger than 99.37%) are realized. The first, third, fifth, and the second, fourth, sixth resonance absorption bands are attributed to the multiple-order responses (i.e., the 1-, 3- and 5-order responses) of the bottom- and top-layer of the structure, respectively, and thus the absorption mechanism of six-band absorber is due to the combination of two sets of the multiple-order resonances of these two layers. Besides, the size changes of the metallic layers have the ability to tune the frequencies of the six-band absorber. Employing the results, we also present a six-band polarization tunable absorber through varying the sizes of the structure in two orthogonal polarization directions. Moreover, nine-band terahertz absorber can be achieved by using a three-layer stacked structure. Simulation results indicate that the absorber possesses nine distinct resonance bands, and average absorptivities of them are larger than 94.03%. The six-band or nine-band absorbers obtained here have potential applications in many optoelectronic and engineering technology areas. PMID:28120897

  6. Six-band terahertz metamaterial absorber based on the combination of multiple-order responses of metallic patches in a dual-layer stacked resonance structure

    NASA Astrophysics Data System (ADS)

    Wang, Ben-Xin; Wang, Gui-Zhen; Sang, Tian; Wang, Ling-Ling

    2017-01-01

    This paper reports on a numerical study of the six-band metamaterial absorber composed of two alternating stack of metallic-dielectric layers on top of a continuous metallic plane. Six obvious resonance peaks with high absorption performance (average larger than 99.37%) are realized. The first, third, fifth, and the second, fourth, sixth resonance absorption bands are attributed to the multiple-order responses (i.e., the 1-, 3- and 5-order responses) of the bottom- and top-layer of the structure, respectively, and thus the absorption mechanism of six-band absorber is due to the combination of two sets of the multiple-order resonances of these two layers. Besides, the size changes of the metallic layers have the ability to tune the frequencies of the six-band absorber. Employing the results, we also present a six-band polarization tunable absorber through varying the sizes of the structure in two orthogonal polarization directions. Moreover, nine-band terahertz absorber can be achieved by using a three-layer stacked structure. Simulation results indicate that the absorber possesses nine distinct resonance bands, and average absorptivities of them are larger than 94.03%. The six-band or nine-band absorbers obtained here have potential applications in many optoelectronic and engineering technology areas.

  7. Compliant Glass Seals for SOFC Stacks

    SciTech Connect

    Chou, Yeong -Shyung; Choi, Jung-Pyung; Xu, Wei; Stephens, Elizabeth V.; Koeppel, Brian J.; Stevenson, Jeffry W.; Lara-Curzio, Edgar

    2014-04-30

    This report summarizes results from experimental and modeling studies performed by participants in the Solid-State Energy Conversion Alliance (SECA) Core Technology Program, which indicate that compliant glass-based seals offer a number of potential advantages over conventional seals based on de-vitrifying glasses, including reduced stresses during stack operation and thermal cycling, and the ability to heal micro-damage induced during thermal cycling. The properties and composition of glasses developed and/or investigated in these studies are reported, along with results from long-term (up to 5,800h) evaluations of seals based on a compliant glass containing ceramic particles or ceramic fibers.

  8. Reliability analysis and initial requirements for FC systems and stacks

    NASA Astrophysics Data System (ADS)

    Åström, K.; Fontell, E.; Virtanen, S.

    In the year 2000 Wärtsilä Corporation started an R&D program to develop SOFC systems for CHP applications. The program aims to bring to the market highly efficient, clean and cost competitive fuel cell systems with rated power output in the range of 50-250 kW for distributed generation and marine applications. In the program Wärtsilä focuses on system integration and development. System reliability and availability are key issues determining the competitiveness of the SOFC technology. In Wärtsilä, methods have been implemented for analysing the system in respect to reliability and safety as well as for defining reliability requirements for system components. A fault tree representation is used as the basis for reliability prediction analysis. A dynamic simulation technique has been developed to allow for non-static properties in the fault tree logic modelling. Special emphasis has been placed on reliability analysis of the fuel cell stacks in the system. A method for assessing reliability and critical failure predictability requirements for fuel cell stacks in a system consisting of several stacks has been developed. The method is based on a qualitative model of the stack configuration where each stack can be in a functional, partially failed or critically failed state, each of the states having different failure rates and effects on the system behaviour. The main purpose of the method is to understand the effect of stack reliability, critical failure predictability and operating strategy on the system reliability and availability. An example configuration, consisting of 5 × 5 stacks (series of 5 sets of 5 parallel stacks) is analysed in respect to stack reliability requirements as a function of predictability of critical failures and Weibull shape factor of failure rate distributions.

  9. Magnetically suspended stacks for inertial energy storage flywheel

    NASA Technical Reports Server (NTRS)

    Anand, Davinder K.; Kirk, James A.; Iwaskiw, Peter

    1987-01-01

    A magnetically suspended flywheel stack based on a 'pancake' magnetic bearing stack is proposed for a 500 watt-hour energy storage system. Backup ball bearings in the system configuration both prevent damage to the system whenever there is a loss of magnetic suspension due to excessive outside disturbances, and insure that the fywheel stays within the linear control range. Design tools to investigate the performance of the control system and the magnetic circuits are also discussed.

  10. Dynamic Recrystallization of Low Stacking Fault Energy Metals

    DTIC Science & Technology

    2007-11-02

    dynamic recovery" occurs by progressive (slow) transformation of subgrain boundaries (LAGB) into grain boundaries (HAGB) - dynamic recovery is weak ...homogeneous ( weak ∆ρ) - the rate of grain boundary migration is high - the rate of grain boundary migration is low low stacking fault energy materials...Cu, γ-iron and austenitic steels, Ni-base superalloys, ... high stacking fault energy materials: Al, α-iron and ferritic steels, β- titanium

  11. Field-induced stacking transition of biofunctionalized trilayer graphene

    NASA Astrophysics Data System (ADS)

    Masato Nakano, C.; Sajib, Md Symon Jahan; Samieegohar, Mohammadreza; Wei, Tao

    2016-02-01

    Trilayer graphene (TLG) is attracting a lot of attention as their stacking structures (i.e., rhombohedral vs. Bernal) drastically affect electronic and optical properties. Based on full-atom molecular dynamics simulations, we here predict electric field-induced rhombohedral-to-Bernal transition of TLG tethered with proteins. Furthermore, our simulations show that protein's electrophoretic mobility and diffusivity are enhanced on TLG surface. This phenomenon of controllable TLG stacking transition will contribute to various applications including biosensing.

  12. GNSS Spoofing Network Monitoring Based on Differential Pseudorange.

    PubMed

    Zhang, Zhenjun; Zhan, Xingqun

    2016-10-23

    Spoofing is becoming a serious threat to various Global Navigation Satellite System (GNSS) applications, especially for those that require high reliability and security such as power grid synchronization and applications related to first responders and aviation safety. Most current works on anti-spoofing focus on spoofing detection from the individual receiver side, which identifies spoofing when it is under an attack. This paper proposes a novel spoofing network monitoring (SNM) mechanism aiming to reveal the presence of spoofing within an area. Consisting of several receivers and one central processing component, it keeps detecting spoofing even when the network is not attacked. The mechanism is based on the different time difference of arrival (TDOA) properties between spoofing and authentic signals. Normally, TDOAs of spoofing signals from a common spoofer are identical while those of authentic signals from diverse directions are dispersed. The TDOA is measured as the differential pseudorange to carrier frequency ratio (DPF). In a spoofing case, the DPFs include those of both authentic and spoofing signals, among which the DPFs of authentic are dispersed while those of spoofing are almost overlapped. An algorithm is proposed to search for the DPFs that are within a pre-defined small range, and an alarm will be raised if several DPFs are found within such range. The proposed SNM methodology is validated by simulations and a partial field trial. Results show 99.99% detection and 0.01% false alarm probabilities are achieved. The SNM has the potential to be adopted in various applications such as (1) alerting dedicated users when spoofing is occurring, which could significantly shorten the receiver side spoofing cost; (2) in combination with GNSS performance monitoring systems, such as the Continuous Operating Reference System (CORS) and GNSS Availability, Accuracy, Reliability anD Integrity Assessment for Timing and Navigation (GAARDIAN) System, to provide more

  13. GNSS Spoofing Network Monitoring Based on Differential Pseudorange

    PubMed Central

    Zhang, Zhenjun; Zhan, Xingqun

    2016-01-01

    Spoofing is becoming a serious threat to various Global Navigation Satellite System (GNSS) applications, especially for those that require high reliability and security such as power grid synchronization and applications related to first responders and aviation safety. Most current works on anti-spoofing focus on spoofing detection from the individual receiver side, which identifies spoofing when it is under an attack. This paper proposes a novel spoofing network monitoring (SNM) mechanism aiming to reveal the presence of spoofing within an area. Consisting of several receivers and one central processing component, it keeps detecting spoofing even when the network is not attacked. The mechanism is based on the different time difference of arrival (TDOA) properties between spoofing and authentic signals. Normally, TDOAs of spoofing signals from a common spoofer are identical while those of authentic signals from diverse directions are dispersed. The TDOA is measured as the differential pseudorange to carrier frequency ratio (DPF). In a spoofing case, the DPFs include those of both authentic and spoofing signals, among which the DPFs of authentic are dispersed while those of spoofing are almost overlapped. An algorithm is proposed to search for the DPFs that are within a pre-defined small range, and an alarm will be raised if several DPFs are found within such range. The proposed SNM methodology is validated by simulations and a partial field trial. Results show 99.99% detection and 0.01% false alarm probabilities are achieved. The SNM has the potential to be adopted in various applications such as (1) alerting dedicated users when spoofing is occurring, which could significantly shorten the receiver side spoofing cost; (2) in combination with GNSS performance monitoring systems, such as the Continuous Operating Reference System (CORS) and GNSS Availability, Accuracy, Reliability anD Integrity Assessment for Timing and Navigation (GAARDIAN) System, to provide more

  14. Highly sensitive analysis of nucleic acids using capillary gel electrophoresis with ultraviolet detection based on the combination of matrix field-amplified and head-column field-amplified stacking injection.

    PubMed

    Lian, Dong-Sheng; Zhao, Shu-Jin

    2015-01-26

    To develop a highly sensitive method for analyzing nucleic acids using capillary gel electrophoresis with ultraviolet detection (CGE-UV), we combined matrix field-amplified with head-column field-amplified stacking injection (C-FASI) to employ the advantages of two methods. Without diminishing the resolution, a limit of detection of 0.13 ng/ml (signal/noise=3) in a 300,000-fold diluted sample was obtained, the sensitivity is 102,308 times higher than that achieved with normal pressure injection, 3077 times that with normal electrokinetic injection, 154 times that with pressure field-amplified sample stacking injection, and 31 times that with matrix field-amplified stacking injection. After establishing the method, we tested the detection of a φX174-Hae III digest DNA product without purification and with a high ionic strength. At the lowest dilution of 5000-fold, sample at a concentration of 10 ng/ml was enriched and detected. The relative standard deviations for migration time and peak area (n=3) were 0.03-1.15 and 0.72-6.42, respectively. To further validate C-FASI was applicable for real sample, a 400 bp PCR product without purification was directly detected with a limit of detection at the concentration of 6000-fold dilution (signal/noise=3), The relative standard deviations for migration time and peak area (n=6) were 0.44 and 4.8, respectively. These results indicated that C-FASI had good qualitative and quantitative detection abilities and CGE-UV based on C-FASI is easy to perform, practical, highly-sensitive and robust for nucleic acid detection, which makes it a highly valuable tool for genetic diagnostics based on nucleic acid analysis.

  15. Van Der Waals heterogeneous layer-layer carbon nanostructures involving π···H-C-C-H···π···H-C-C-H stacking based on graphene and graphane sheets.

    PubMed

    Yuan, Kun; Zhao, Rui-Sheng; Zheng, Jia-Jia; Zheng, Hong; Nagase, Shigeru; Zhao, Sheng-Dun; Liu, Yan-Zhi; Zhao, Xiang

    2017-04-15

    Noncovalent interactions involving aromatic rings, such as π···π stacking, CH···π are very essential for supramolecular carbon nanostructures. Graphite is a typical homogenous carbon matter based on π···π stacking of graphene sheets. Even in systems not involving aromatic groups, the stability of diamondoid dimer and layer-layer graphane dimer originates from C - H···H - C noncovalent interaction. In this article, the structures and properties of novel heterogeneous layer-layer carbon-nanostructures involving π···H-C-C-H···π···H-C-C-H stacking based on [n]-graphane and [n]-graphene and their derivatives are theoretically investigated for n = 16-54 using dispersion corrected density functional theory B3LYP-D3 method. Energy decomposition analysis shows that dispersion interaction is the most important for the stabilization of both double- and multi-layer-layer [n]-graphane@graphene. Binding energy between graphane and graphene sheets shows that there is a distinct additive nature of CH···π interaction. For comparison and simplicity, the concept of H-H bond energy equivalent number of carbon atoms (noted as NHEQ), is used to describe the strength of these noncovalent interactions. The NHEQ of the graphene dimers, graphane dimers, and double-layered graphane@graphene are 103, 143, and 110, indicating that the strength of C-H···π interaction is close to that of π···π and much stronger than that of C-H···H-C in large size systems. Additionally, frontier molecular orbital, electron density difference and visualized noncovalent interaction regions are discussed for deeply understanding the nature of the C-H···π stacking interaction in construction of heterogeneous layer-layer graphane@graphene structures. We hope that the present study would be helpful for creations of new functional supramolecular materials based on graphane and graphene carbon nano-structures. © 2017 Wiley Periodicals, Inc.

  16. Transparent organic photodiodes stacked with electroluminescence devices

    NASA Astrophysics Data System (ADS)

    Komatsu, Takahiro; Sakanoue, Kei; Fujita, Katsuhiko; Tsutsui, Tetsuo

    2005-10-01

    Stacked devices that consisted of transparent organic photodiodes (TOPDs) and organic electroluminescence devices (OELs) were demonstrated. TOPDs were prepared by poly-(2-methoxy-5- (2'-ethylhexyloxy)-1,4-phenylene vinylene (MEH-PPV) and [6,6]-phenyl C61-butyric acid methyl ester (PCBM) blend films as an active layer and transparent Au cathode (10 nm thick). These TOPDs showed about 45 % transmittance on average in visible light region (380-780 nm) and good correlation between incident light intensity and output photocurrent. Based on these results, the stacked devices were prepared by introducing OELs on TOPDs through a SiO insulating layer. The structure of OELs was ITO/Carbon/TPD/Alq3/LiF/Al. These stacked devices work as light emitting devices and also photo diodes. Since TOPDs have transparency, OELs can illuminate a paper put on the glass substrate through TOPDs and TOPDs can receive reflective light from the paper. Although the TOPDs also absorb light from OELs directly, the output signals from TOPDs changed according to the black and white pattern of the paper. These results show that the devices act as an image sensor having light emitting layer and light receiving layer in a same area.

  17. A study of impulsive multiterm fractional differential equations with single and multiple base points and applications.

    PubMed

    Liu, Yuji; Ahmad, Bashir

    2014-01-01

    We discuss the existence and uniqueness of solutions for initial value problems of nonlinear singular multiterm impulsive Caputo type fractional differential equations on the half line. Our study includes the cases for a single base point fractional differential equation as well as multiple base points fractional differential equation. The asymptotic behavior of solutions for the problems is also investigated. We demonstrate the utility of our work by applying the main results to fractional-order logistic models.

  18. A Study of Impulsive Multiterm Fractional Differential Equations with Single and Multiple Base Points and Applications

    PubMed Central

    Liu, Yuji; Ahmad, Bashir

    2014-01-01

    We discuss the existence and uniqueness of solutions for initial value problems of nonlinear singular multiterm impulsive Caputo type fractional differential equations on the half line. Our study includes the cases for a single base point fractional differential equation as well as multiple base points fractional differential equation. The asymptotic behavior of solutions for the problems is also investigated. We demonstrate the utility of our work by applying the main results to fractional-order logistic models. PMID:24578623

  19. Single-molecule dissection of stacking forces in DNA.

    PubMed

    Kilchherr, Fabian; Wachauf, Christian; Pelz, Benjamin; Rief, Matthias; Zacharias, Martin; Dietz, Hendrik

    2016-09-09

    We directly measured at the single-molecule level the forces and lifetimes of DNA base-pair stacking interactions for all stack sequence combinations. Our experimental approach combined dual-beam optical tweezers with DNA origami components to allow positioning of blunt-end DNA helices so that the weak stacking force could be isolated. Base-pair stack arrays that lacked a covalent backbone connection spontaneously dissociated at average rates ranging from 0.02 to 500 per second, depending on the sequence combination and stack array size. Forces in the range from 2 to 8 piconewtons that act along the helical direction only mildly accelerated the stochastic unstacking process. The free-energy increments per stack that we estimate from the measured forward and backward kinetic rates ranged from -0.8 to -3.4 kilocalories per mole, depending on the sequence combination. Our data contributes to understanding the mechanics of DNA processing in biology, and it is helpful for designing the kinetics of DNA-based nanoscale devices according to user specifications.

  20. Polycrystallinity and stacking in CVD graphene.

    PubMed

    Tsen, Adam W; Brown, Lola; Havener, Robin W; Park, Jiwoong

    2013-10-15

    slowly grown films. These structural differences can affect the material's electrical properties: for example, better-connected grain boundaries are more electrically conductive. However, grain boundaries in general are mechanically weaker than pristine graphene, which is an order of magnitude stronger than CVD graphene based on indentation measurements performed with an atomic force microscope. Vertical junctions in multilayer CVD graphene have two key structural features. First, bilayer graphene (BLG) with Bernal stacking exists in two mirrored configurations (AB or AC) that also form isolated domains. Similarly, oriented trilayer graphene also has alternating ABA and ABC stacked layers. Second, in twisted multilayer graphene, stacked layers lack long-range atomic registry and can move freely relative to each other, which generates unique optical properties. In particular, an interlayer optical excitation produces strong Raman and absorption peaks, dependent on the twist angle. A better understanding of the structural and physical properties of grain boundaries and multilayers in CVD graphene is central to realizing the full potential of graphene in large-scale applications. In addition, these studies provide a model for characterizing other layered materials, such as hexagonal boron nitride and MoS2, where similar polycrystallinity and stacking are expected when grown in large areas.

  1. Stack optimization of oxide-based RRAM for fast write speed (<1 μs) at low operating current (<10 μA)

    NASA Astrophysics Data System (ADS)

    Chen, C. Y.; Goux, L.; Fantini, A.; Degraeve, R.; Redolfi, A.; Groeseneken, G.; Jurczak, M.

    2016-11-01

    In this paper we engineer a TiN ⧹ Al2O3 ⧹ (Hf,Al)O2 ⧹ Ta2O5 ⧹ Hf Oxide Resistive Random Access Memory (OxRRAM) device for fast switching at low operation current without sacrificing the retention and endurance properties. The integrated 40 nm × 40 nm cell switches at 10 μA using write pulses shorter than 100 ns (resp. 1 μs) for Reset (resp. Set) and with amplitude <2 V. Using these conditions in a specially developed verify algorithm, a resistive window of 10× is reliably obtained, decreasing the write speed by more than 1 decade compared to state-of-the-art OxRRAM stacks at same current level.

  2. 29 CFR 1620.20 - Pay differentials claimed to be based on extra duties.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... 29 Labor 4 2010-07-01 2010-07-01 false Pay differentials claimed to be based on extra duties. 1620.20 Section 1620.20 Labor Regulations Relating to Labor (Continued) EQUAL EMPLOYMENT OPPORTUNITY COMMISSION THE EQUAL PAY ACT § 1620.20 Pay differentials claimed to be based on extra duties....

  3. Supramolecular self-assembly of a coumarine-based acylthiourea synthon directed by π-stacking interactions: Crystal structure and Hirshfeld surface analysis

    NASA Astrophysics Data System (ADS)

    Saeed, Aamer; Ashraf, Saba; Flörke, Ulrich; Delgado Espinoza, Zuly Yuliana; Erben, Mauricio F.; Pérez, Hiram

    2016-05-01

    The structure of 1-(2-oxo-2H-chromene-3-carbonyl)-3-(2-methoxy-phenyl)thiourea (1) has been determined by single-crystal X-ray crystallography. This compound crystallizes in the monoclinic space group P21/c with a = 7.455 (2) Å, b = 12.744 (3) Å, c = 16.892 (4) Å, β = 90.203 (6)° and Z = 4. Both, the coumarin and the phenyl rings are nearly coplanar with the central 1-acylthiourea group, with the Cdbnd O and Cdbnd S bonds adopting an opposite orientation. Intramolecular N-H···O, C-H···O, and C-H···S hydrogen bonds are favored by the planar conformation. The molecules are packed through C-H···O, C-H···S and C-H···C hydrogen bonds, and two π···π interactions with offset arrangement. Inter-centroid distance of 3.490 (2) Å, slip angles of 18.5 and 20.9°, and vertical displacements of 1.10 and 1.24 Å are the stacking parameters corresponding to the stronger π···π interaction. Hirshfeld surface analysis was performed for visualizing, exploring and quantifying intermolecular interactions in the crystal lattice of compound 1, and compared with two closely related species. Shape index and Curvedness surfaces indicated π-stacking with different features in opposed sides of the molecule. Fingerprint plot showed C···C contacts with similar contributions to the crystal packing in comparison with those associated to hydrogen bonds. Enrichment ratios for H···H, O···H, S···H and C···C contacts revealed a high propensity to form in the crystal.

  4. Research Note : RESEARCH NOTE Stacking three-component seismograms

    NASA Astrophysics Data System (ADS)

    Kennett, B. L. N.

    2000-04-01

    Standard stacking procedures are based on the combination of many scalar traces, and can exploit the coherency of arrivals between traces using non-linear methods. Such stacks can be used with some success for three-component data but do not exploit the vector character of the seismic wavefield. A set of stacking methods are introduced to work directly with three-component data and include intercomponent coherency through 3 x 3 matrix measures. These techniques include extensions of both semblance and phase stacks. Such techniques allow the exploitation of cross-component information, which can be particularly valuable in the analysis of the S wavefield. Potential applications arise for the analysis of three-component records from controlled-source experiments, arrays of portable broad-band instruments and beam-forming at permanent monitoring installations.

  5. Glass transition dynamics of stacked thin polymer films

    NASA Astrophysics Data System (ADS)

    Fukao, Koji; Terasawa, Takehide; Oda, Yuto; Nakamura, Kenji; Tahara, Daisuke

    2011-10-01

    The glass transition dynamics of stacked thin films of polystyrene and poly(2-chlorostyrene) were investigated using differential scanning calorimetry and dielectric relaxation spectroscopy. The glass transition temperature Tg of as-stacked thin polystyrene films has a strong depression from that of the bulk samples. However, after annealing at high temperatures above Tg, the stacked thin films exhibit glass transition at a temperature almost equal to the Tg of the bulk system. The α-process dynamics of stacked thin films of poly(2-chlorostyrene) show a time evolution from single-thin-film-like dynamics to bulk-like dynamics during the isothermal annealing process. The relaxation rate of the α process becomes smaller with increase in the annealing time. The time scale for the evolution of the α dynamics during the annealing process is very long compared with that for the reptation dynamics. At the same time, the temperature dependence of the relaxation time for the α process changes from Arrhenius-like to Vogel-Fulcher-Tammann dependence with increase of the annealing time. The fragility index increases and the distribution of the α-relaxation times becomes smaller with increase in the annealing time for isothermal annealing. The observed change in the α process is discussed with respect to the interfacial interaction between the thin layers of stacked thin polymer films.

  6. Progress Update: Stack Project Complete

    ScienceCinema

    Cody, Tom

    2016-07-12

    Progress update from the Savannah River Site. The 75 foot 293 F Stack, built for plutonium production, was cut down to size in order to prevent injury or release of toxic material if the structure were to collapse due to harsh weather.

  7. Multibeam collimator uses prism stack

    NASA Technical Reports Server (NTRS)

    Minott, P. O.

    1981-01-01

    Optical instrument creates many divergent light beams for surveying and machine element alignment applications. Angles and refractive indices of stack of prisms are selected to divert incoming laser beam by small increments, different for each prism. Angles of emerging beams thus differ by small, precisely-controlled amounts. Instrument is nearly immune to vibration, changes in gravitational force, temperature variations, and mechanical distortion.

  8. Multilayer Piezoelectric Stack Actuator Characterization

    NASA Technical Reports Server (NTRS)

    Sherrit, Stewart; Jones, Christopher M.; Aldrich, Jack B.; Blodget, Chad; Bao, Xioaqi; Badescu, Mircea; Bar-Cohen, Yoseph

    2008-01-01

    Future NASA missions are increasingly seeking to use actuators for precision positioning to accuracies of the order of fractions of a nanometer. For this purpose, multilayer piezoelectric stacks are being considered as actuators for driving these precision mechanisms. In this study, sets of commercial PZT stacks were tested in various AC and DC conditions at both nominal and extreme temperatures and voltages. AC signal testing included impedance, capacitance and dielectric loss factor of each actuator as a function of the small-signal driving sinusoidal frequency, and the ambient temperature. DC signal testing includes leakage current and displacement as a function of the applied DC voltage. The applied DC voltage was increased to over eight times the manufacturers' specifications to investigate the correlation between leakage current and breakdown voltage. Resonance characterization as a function of temperature was done over a temperature range of -180C to +200C which generally exceeded the manufacturers' specifications. In order to study the lifetime performance of these stacks, five actuators from one manufacturer were driven by a 60volt, 2 kHz sine-wave for ten billion cycles. The tests were performed using a Lab-View controlled automated data acquisition system that monitored the waveform of the stack electrical current and voltage. The measurements included the displacement, impedance, capacitance and leakage current and the analysis of the experimental results will be presented.

  9. Progress Update: Stack Project Complete

    SciTech Connect

    Cody, Tom

    2010-01-01

    Progress update from the Savannah River Site. The 75 foot 293 F Stack, built for plutonium production, was cut down to size in order to prevent injury or release of toxic material if the structure were to collapse due to harsh weather.

  10. Late Pleistocene Sea Level Stack

    NASA Astrophysics Data System (ADS)

    Spratt, R. M.; Lisiecki, L. E.

    2014-12-01

    Sea level reconstructions have been created using wide variety of proxies and models. The accuracy of individual sea level reconstructions is limited by measurement, noise, local variations in salinity and temperature, and the assumptions particular to each reconstruction. To address these limitations, we have created a sea level stack (average) which increases the signal-to-noise ratio of sea level estimates by combining 5-7 sea level reconstructions over the last 800 kyr. Principal Component analysis (PCA) of seven sea level records from 0-430 kyr ago shows that 82% of the variance in these records is explained by their first principal component (i.e., the stack). Additionally, a stack of just the 5 longer records that extends to 800 kyr closely matches the timing and amplitude of our seven-record mean. We find that the mean sea level estimate for Marine Isotope Stage (MIS) 5e is 0-4 m above modern, and that the standard deviation of individual estimates is 11 m. Mean sea level estimates for MIS 11 are 12-16 m above modern with a standard deviation of 30 m. Due to the large variability between individual reconstructions, our sea level stack may provide more robust sea level estimates than any single technique.

  11. Multilayer piezoelectric stack actuator characterization

    NASA Astrophysics Data System (ADS)

    Sherrit, Stewart; Jones, Christopher M.; Aldrich, Jack B.; Blodget, Chad; Bao, Xioaqi; Badescu, Mircea; Bar-Cohen, Yoseph

    2008-03-01

    Future NASA missions are increasingly seeking to use actuators for precision positioning to accuracies of the order of fractions of a nanometer. For this purpose, multilayer piezoelectric stacks are being considered as actuators for driving these precision mechanisms. In this study, sets of commercial PZT stacks were tested in various AC and DC conditions at both nominal and extreme temperatures and voltages. AC signal testing included impedance, capacitance and dielectric loss factor of each actuator as a function of the small-signal driving sinusoidal frequency, and the ambient temperature. DC signal testing includes leakage current and displacement as a function of the applied DC voltage. The applied DC voltage was increased to over eight times the manufacturers' specifications to investigate the correlation between leakage current and breakdown voltage. Resonance characterization as a function of temperature was done over a temperature range of -180°C to +200°C which generally exceeded the manufacturers' specifications. In order to study the lifetime performance of these stacks, five actuators from one manufacturer were driven by a 60volt, 2 kHz sine-wave for ten billion cycles. The tests were performed using a Lab-View controlled automated data acquisition system that monitored the waveform of the stack electrical current and voltage. The measurements included the displacement, impedance, capacitance and leakage current and the analysis of the experimental results will be presented.

  12. Constraining faint terrestrial gamma-ray flashes with stacking analyses

    NASA Astrophysics Data System (ADS)

    Smith, D. M.; Buzbee, P.; Aron-Dine, S.; Kelley, N. A.; Holzworth, R. H., II; Hutchins, M. L.; Dwyer, J. R.

    2014-12-01

    We searched for gamma-ray emission from lightning using a satellite (the Reuven Ramaty Solar Spectroscopic Imager (RHESSI)) and an instrument on an aircraft (the Airborne Detector for Energetic Lightning Emissions (ADELE)). Both instruments have detected terrestrial gamma-ray flashes (TGFs) via direct searches for statistically significant bursts of gamma-rays. In our new analysis, we instead identified times when the instruments were near known lightning discharges based on VLF radio data (from the Worldwide Lightning Location Network (WWLLN) in the case of RHESSI and from three North American networks in the case of ADELE). We then stacked together the gamma-ray signals for each instrument, with times adjusted to be relative to the time of radio emission for each discharge (corrected for light propagation time to the spacecraft in the case of RHESSI). The resulting stacked gamma-ray time profile is sensitive to an average level of gamma-ray emission far lower than what can be recognized above background for a single TGF. The summed signal from small, untriggered TGFs is remarkably weak, and preliminary evidence suggests that it comes mostly from distant, bright TGFs observed outside the main bremsstrahlung beam, not from a population of subluminous TGFs near the spacecraft. Under the assumption of a broken power-law differential distribution of TGF intensities, we find that the index must break (harden or cut off) just below the current sensitivity limit of satellites like RHESSI and Fermi, and that less than 1% of lightning can produce a TGF that belongs to the same distribution as those that are observable.

  13. Phaser-Based Courseware for Ordinary Differential Equations.

    ERIC Educational Resources Information Center

    Zia, Lee l.

    1991-01-01

    Presented are classroom-tested examples of instructional materials (courseware) for ordinary differential equations using the software package PHASER. All of the examples include in-class demonstration techniques and commentaries for instructor use, student homework and laboratory exercises, and suggestions for in-class examination questions. (JJK)

  14. Power consumption analysis of priority-based service differentiation scheme for LR-WPANs

    NASA Astrophysics Data System (ADS)

    Kim, Meejoung; Hwang, Eenjun

    2016-06-01

    In this paper, we investigate the effect of service differentiation on the power consumption in contention period of IEEE 802.15.4 sensor networks. Power consumption is analysed for two different service differentiation schemes under non-saturation condition. The two service differentiation schemes are the differentiation by the backoff exponent (BED) and differentiation by the contention window (CWD), which provide multilevel differentiated services in beacon-enabled mode with slotted carrier sense multiple access/collision avoidance (CSMA/CA) algorithm. The analysis is based on the stationary probabilities of a discrete-time Markov chain, which is a model of CSMA/CA describing the state of a head packet of a device. Numerical results show that CWD uses the power more efficiently and performs better in terms of throughput, while BED more differentiates the service.

  15. Density based pruning for identification of differentially expressed genes from microarray data

    PubMed Central

    2010-01-01

    Motivation Identification of differentially expressed genes from microarray datasets is one of the most important analyses for microarray data mining. Popular algorithms such as statistical t-test rank genes based on a single statistics. The false positive rate of these methods can be improved by considering other features of differentially expressed genes. Results We proposed a pattern recognition strategy for identifying differentially expressed genes. Genes are mapped to a two dimension feature space composed of average difference of gene expression and average expression levels. A density based pruning algorithm (DB Pruning) is developed to screen out potential differentially expressed genes usually located in the sparse boundary region. Biases of popular algorithms for identifying differentially expressed genes are visually characterized. Experiments on 17 datasets from Gene Omnibus Database (GEO) with experimentally verified differentially expressed genes showed that DB pruning can significantly improve the prediction accuracy of popular identification algorithms such as t-test, rank product, and fold change. Conclusions Density based pruning of non-differentially expressed genes is an effective method for enhancing statistical testing based algorithms for identifying differentially expressed genes. It improves t-test, rank product, and fold change by 11% to 50% in the numbers of identified true differentially expressed genes. The source code of DB pruning is freely available on our website http://mleg.cse.sc.edu/degprune PMID:21047384

  16. Slippage in stacking of graphene nanofragments induced by spin polarization

    NASA Astrophysics Data System (ADS)

    Lei, Yanyu; Jiang, Wanrun; Dai, Xing; Song, Ruixia; Wang, Bo; Gao, Yang; Wang, Zhigang

    2015-06-01

    Spin polarization and stacking are interesting effects in complex molecular systems and are both presented in graphene-based materials. Their possible combination may provide a new perspective in understanding the intermolecular force. The nanoscale graphene structures with zigzag edges could possess spin-polarized ground states. However, the mechanical effect of spin polarization in stacking of graphene nanofragments is not clear. Here we demonstrate the displacement between two stacked rhombic graphene nanofragments induced by spin polarization, using first-principles density-functional methods. We found that, in stacking of two rhombic graphene nanofragments, a spin-polarized stacked conformation with zero total spin is energetically more favorable than the closed-shell stacking. The spin-polarized conformation gives a further horizontal interlayer displacement within 1 angstrom compared with the closed-shell structure. This result highlights that, besides the well-known phenomenologically interpreted van der Waals forces, a specific mechanism dependent on the monomeric spin polarization may lead to obvious mechanical effects in some intermolecular interactions.

  17. Slippage in stacking of graphene nanofragments induced by spin polarization

    PubMed Central

    Lei, Yanyu; Jiang, Wanrun; Dai, Xing; Song, Ruixia; Wang, Bo; Gao, Yang; Wang, Zhigang

    2015-01-01

    Spin polarization and stacking are interesting effects in complex molecular systems and are both presented in graphene-based materials. Their possible combination may provide a new perspective in understanding the intermolecular force. The nanoscale graphene structures with zigzag edges could possess spin-polarized ground states. However, the mechanical effect of spin polarization in stacking of graphene nanofragments is not clear. Here we demonstrate the displacement between two stacked rhombic graphene nanofragments induced by spin polarization, using first-principles density-functional methods. We found that, in stacking of two rhombic graphene nanofragments, a spin-polarized stacked conformation with zero total spin is energetically more favorable than the closed-shell stacking. The spin-polarized conformation gives a further horizontal interlayer displacement within 1 angstrom compared with the closed-shell structure. This result highlights that, besides the well-known phenomenologically interpreted van der Waals forces, a specific mechanism dependent on the monomeric spin polarization may lead to obvious mechanical effects in some intermolecular interactions. PMID:26078005

  18. Slippage in stacking of graphene nanofragments induced by spin polarization.

    PubMed

    Lei, Yanyu; Jiang, Wanrun; Dai, Xing; Song, Ruixia; Wang, Bo; Gao, Yang; Wang, Zhigang

    2015-06-16

    Spin polarization and stacking are interesting effects in complex molecular systems and are both presented in graphene-based materials. Their possible combination may provide a new perspective in understanding the intermolecular force. The nanoscale graphene structures with zigzag edges could possess spin-polarized ground states. However, the mechanical effect of spin polarization in stacking of graphene nanofragments is not clear. Here we demonstrate the displacement between two stacked rhombic graphene nanofragments induced by spin polarization, using first-principles density-functional methods. We found that, in stacking of two rhombic graphene nanofragments, a spin-polarized stacked conformation with zero total spin is energetically more favorable than the closed-shell stacking. The spin-polarized conformation gives a further horizontal interlayer displacement within 1 angstrom compared with the closed-shell structure. This result highlights that, besides the well-known phenomenologically interpreted van der Waals forces, a specific mechanism dependent on the monomeric spin polarization may lead to obvious mechanical effects in some intermolecular interactions.

  19. Standoff Stack Emissions Monitoring Using Short Range Lidar

    NASA Astrophysics Data System (ADS)

    Gravel, Jean-Francois Y.; Babin, Francois; Allard, Martin

    2016-06-01

    There are well documented methods for stack emissions monitoring. These are all based on stack sampling through sampling ports in well defined conditions. Once sampled, the molecules are quantified in instruments that often use optical techniques. Unfortunately sampling ports are not found on all stacks/ducts or the use of the sampling ports cannot be planned efficiently because of operational constraints or the emissions monitoring equipment cannot be driven to a remote stack/duct. Emissions monitoring using many of the same optical techniques, but at a standoff distance, through the atmosphere, using short range high spatial resolution lidar techniques was thus attempted. Standoff absorption and Raman will be discussed and results from a field campaign will be presented along with short descriptions of the apparatus. In the first phase of these tests, the molecules that were targeted were NO and O2. Spatially resolved optical measurements allow for standoff identification and quantification of molecules, much like the standardized methods, except for the fact that it is not done in the stack, but in the plume formed by the emissions from the stack. The pros and cons will also be discussed, and in particular the problem of mass emission estimates that require the knowledge of the flow rate and the distribution of molecular concentration in the plane of measurement.

  20. Improved Durability of SOEC Stacks for High Temperature Electrolysis

    SciTech Connect

    James E. O'Brien; Robert C. O'Brien; Xiaoyu Zhang; Joseph J. Hartvigsen; Greg Tao

    2013-01-01

    High temperature steam electrolysis is a promising technology for efficient and sustainable large-scale hydrogen production. Solid oxide electrolysis cells (SOECs) are able to utilize high temperature heat and electric power from advanced high-temperature nuclear reactors or renewable sources to generate carbon-free hydrogen at large scale. However, long term durability of SOECs needs to be improved significantly before commercialization of this technology can be realized. A degradation rate of 1%/khr or lower is proposed as a threshold value for commercialization of this technology. Solid oxide electrolysis stack tests have been conducted at Idaho National Laboratory to demonstrate recent improvements in long-term durability of SOECs. Electrolyte-supported and electrode-supported SOEC stacks were provided by Ceramatec Inc. and Materials and Systems Research Inc. (MSRI), respectively, for these tests. Long-term durability tests were generally operated for a duration of 1000 hours or more. Stack tests based on technologies developed at Ceramatec and MSRI have shown significant improvement in durability in the electrolysis mode. Long-term degradation rates of 3.2%/khr and 4.6%/khr were observed for MSRI and Ceramatec stacks, espectively. One recent Ceramatec stack even showed negative degradation (performance improvement) over 1900 hours of operation. Optimization of electrode materials, interconnect coatings, and electrolyte-electrode interface microstructures contribute to better durability of SOEC stacks.

  1. Testing Differential Effects of Computer-Based, Web-Based and Paper-Based Administration of Questionnaire Research Instruments

    ERIC Educational Resources Information Center

    Hardre, Patricia L.; Crowson, H. Michael; Xie, Kui; Ly, Cong

    2007-01-01

    Translation of questionnaire instruments to digital administration systems, both self-contained and web-based, is widespread and increasing daily. However, the literature is lean on controlled empirical studies investigating the potential for differential effects of administrative methods. In this study, two university student samples were…

  2. Angular resolution of stacked resistive plate chambers

    NASA Astrophysics Data System (ADS)

    Samuel, Deepak; Onikeri, Pratibha B.; Murgod, Lakshmi P.

    2017-01-01

    We present here detailed derivations of mathematical expressions for the accuracy in the arrival direction of particles estimated using a set of stacked resistive plate chambers (RPCs). The expressions are validated against experimental results using data collected from the prototype detectors (without magnet) of the upcoming India-based Neutrino Observatory (INO). We also present a theoretical estimate of angular resolution of such a setup. In principle, these expressions can be used for any other detector with an architecture similar to that of RPCs.

  3. Improved Direct Methanol Fuel Cell Stack

    SciTech Connect

    Wilson, Mahlon S.; Ramsey, John C.

    2005-03-08

    A stack of direct methanol fuel cells exhibiting a circular footprint. A cathode and anode manifold, tie-bolt penetrations and tie-bolts are located within the circular footprint. Each fuel cell uses two graphite-based plates. One plate includes a cathode active area that is defined by serpentine channels connecting the inlet and outlet cathode manifold. The other plate includes an anode active area defined by serpentine channels connecting the inlet and outlet of the anode manifold, where the serpentine channels of the anode are orthogonal to the serpentine channels of the cathode. Located between the two plates is the fuel cell active region.

  4. Evolution of lateral structures during the functional stack build-up of P3HT:PCBM-based bulk heterojunction solar cells.

    PubMed

    Guo, Shuai; Ruderer, Matthias A; Rawolle, Monika; Körstgens, Volker; Birkenstock, Christopher; Perlich, Jan; Müller-Buschbaum, Peter

    2013-09-11

    Bulk heterojunction (BHJ) solar cells from 1,2-dichlorobenzene solution processed regioregular poly(3-hexylthiophene-2,5-diyl) (P3HT): phenyl-C61-butyric acid methyl ester (PCBM) are prepared and investigated at different steps of the multilayer stack build-up of the device. The inner structure is probed from the molecular to the mesoscale with grazing incidence small/wide-angle X-ray scattering (GISAXS/GIWAXS) and X-ray reflectivity (XRR). The surface morphology is detected with atomic force microscopy (AFM). Therefore, an in-depth knowledge of the three-dimensional morphology of the bulk heterojunction solar cell, starting from the cleaned ITO substrate up to the final post-treated solar cell, is generated. The active layer structure is influenced by the annealing as well as by the top contact deposition. Structures coarsen during the evaporation of the metal contacts. The P3HT crystal structure strongly depends on the device processing as well. These morphological changes together with the diffusion of aluminum atoms to the active layer are of importance for the device efficiency.

  5. Differentiated protection services with failure probability guarantee for workflow-based applications

    NASA Astrophysics Data System (ADS)

    Zhong, Yaoquan; Guo, Wei; Jin, Yaohui; Sun, Weiqiang; Hu, Weisheng

    2010-12-01

    A cost-effective and service-differentiated provisioning strategy is very desirable to service providers so that they can offer users satisfactory services, while optimizing network resource allocation. Providing differentiated protection services to connections for surviving link failure has been extensively studied in recent years. However, the differentiated protection services for workflow-based applications, which consist of many interdependent tasks, have scarcely been studied. This paper investigates the problem of providing differentiated services for workflow-based applications in optical grid. In this paper, we develop three differentiated protection services provisioning strategies which can provide security level guarantee and network-resource optimization for workflow-based applications. The simulation demonstrates that these heuristic algorithms provide protection cost-effectively while satisfying the applications' failure probability requirements.

  6. Helping Students Design HyperCard Stacks.

    ERIC Educational Resources Information Center

    Dunham, Ken

    1995-01-01

    Discusses how to teach students to design HyperCard stacks. Highlights include introducing HyperCard, developing storyboards, introducing design concepts and scripts, presenting stacks, evaluating storyboards, and continuing projects. A sidebar presents a HyperCard stack evaluation form. (AEF)

  7. 49 CFR 178.980 - Stacking test.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 49 Transportation 3 2013-10-01 2013-10-01 false Stacking test. 178.980 Section 178.980... Packagings § 178.980 Stacking test. (a) General. The stacking test must be conducted for the qualification of... test. (1) All Large Packagings except flexible Large Packaging design types must be loaded to...

  8. 49 CFR 178.606 - Stacking test.

    Code of Federal Regulations, 2013 CFR

    2013-10-01

    ... 49 Transportation 3 2013-10-01 2013-10-01 false Stacking test. 178.606 Section 178.606... Packagings and Packages § 178.606 Stacking test. (a) General. All packaging design types other than bags must be subjected to a stacking test. (b) Number of test samples. Three test samples are required for...

  9. An Introduction to Differentials Based on Hyperreal Numbers and Infinite Microscopes

    ERIC Educational Resources Information Center

    Henry, Valerie

    2010-01-01

    In this article, we propose to introduce the differential of a function through a non-classical way, lying on hyperreals and infinite microscopes. This approach is based on the developments of nonstandard analysis, wants to be more intuitive than the classical one and tries to emphasize the functional and geometric aspects of the differential. In…

  10. A Comparison of Function-Based Differential Reinforcement Interventions for Children Engaging in Disruptive Classroom Behavior

    ERIC Educational Resources Information Center

    LeGray, Matthew W.; Dufrene, Brad A.; Sterling-Turner, Heather; Olmi, D. Joe; Bellone, Katherine

    2010-01-01

    This study provides a direct comparison of differential reinforcement of other behavior (DRO) and differential reinforcement of alternative behavior (DRA). Participants included three children in center-based classrooms referred for functional assessments due to disruptive classroom behavior. Functional assessments included interviews and brief…

  11. Differential Response to a School-Based Program for Young Children with ASD

    ERIC Educational Resources Information Center

    Sandall, Susan R.; Ashmun, Julie W.; Schwartz, Ilene S.; Davis, Carol Ann; Williams, Penny; Leon-Guerrero, RinaMarie; Boulware, Gusty-Lee; McBride, Bonnie J.

    2011-01-01

    Differential outcome and differential response to research-based interventions are challenging issues for researchers, teachers, and families of young children with autism spectrum disorder (ASD). In this article, the authors present information on responders to an early education program, Project DATA (Developmentally Appropriate Treatment for…

  12. Differentiated protection method in passive optical networks based on OPEX

    NASA Astrophysics Data System (ADS)

    Zhang, Zhicheng; Guo, Wei; Jin, Yaohui; Sun, Weiqiang; Hu, Weisheng

    2011-12-01

    Reliable service delivery becomes more significant due to increased dependency on electronic services all over society and the growing importance of reliable service delivery. As the capability of PON increasing, both residential and business customers may be included in a PON. Meanwhile, OPEX have been proven to be a very important factor of the total cost for a telecommunication operator. Thus, in this paper, we present the partial protection PON architecture and compare the operational expenditures (OPEX) of fully duplicated protection and partly duplicated protection for ONUs with different distributed fiber length, reliability requirement and penalty cost per hour. At last, we propose a differentiated protection method to minimize OPEX.

  13. Differentiating biochemistry course laboratories based on student experience.

    PubMed

    Jakubowski, Henry V

    2011-01-01

    Content and emphases in undergraduate biochemistry courses can be readily tailored to accommodate the standards of the department in which they are housed, as well as the backgrounds of the students in the courses. A more challenging issue is how to construct laboratory experiences for a class with both chemistry majors, who usually have little or no experience with biochemical techniques and biology and biochemistry majors who do. This manuscript describes a strategy for differentiating biochemistry labs to meet the needs of students with differing backgrounds.

  14. Stack Monitor Operating Experience Review

    SciTech Connect

    L. C. Cadwallader; S. A. Bruyere

    2009-05-01

    Stack monitors are used to sense radioactive particulates and gases in effluent air being vented from rooms of nuclear facilities. These monitors record the levels and types of effluents to the environment. This paper presents the results of a stack monitor operating experience review of the U.S. Department of Energy (DOE) Occurrence Reporting and Processing System (ORPS) database records from the past 18 years. Regulations regarding these monitors are briefly described. Operating experiences reported by the U.S. DOE and in engineering literature sources were reviewed to determine the strengths and weaknesses of these monitors. Electrical faults, radiation instrumentation faults, and human errors are the three leading causes of failures. A representative “all modes” failure rate is 1E-04/hr. Repair time estimates vary from an average repair time of 17.5 hours (with spare parts on hand) to 160 hours (without spare parts on hand). These data should support the use of stack monitors in any nuclear facility, including the National Ignition Facility and the international ITER project.

  15. Stacks

    ERIC Educational Resources Information Center

    Kimber, Lizzie

    2010-01-01

    Linton Waters and Jayne Kranat ran a session on the Nuffield "Applying Mathematical Processes" (AMP) activities at BCME7 in Manchester in April this year. These 1-2 hour activities are revamps of some of the Graded Assessment in Mathematics (GAIM) resources, developed in the 1980s, and are freely available via the Nuffield website and…

  16. Differential protein labeling based on electrochemically generated reactive intermediates.

    PubMed

    Büter, Lars; Faber, Helene; Wigger, Tina; Vogel, Martin; Karst, Uwe

    2015-10-06

    A specific labeling method for cysteine moieties in proteins was developed. Electrochemical oxidation of phenolic compounds such as phenol or acetaminophen leads to the generation of the reactive intermediates benzoquinone and N-acetyl-p-benzoquinone imine, which can subsequently react with nucleophilic thiol functions in peptides or proteins. Differential labeling of cysteine residues was successfully demonstrated with native as well as heavy-isotope labeled forms of the corresponding labeling compounds. The specific mass differences on the peptide level were successfully analyzed by mass spectrometry for the tripeptide glutathione. Free cysteines in various proteins such as β-lactoglobulin A, human serum albumin, hemoglobin, and human carbonic anhydrase I were successfully labeled. Tryptic digestion of differentially labeled carbonic anhydrase I and hemoglobin allowed the identification of the binding site in the proteins. The obtained mass difference allowed an easy identification of the cysteine containing peptides. With these experiments, it was successfully demonstrated that the developed method can serve as a tool for counting cysteine moieties in proteins and, thus, be used as an additional technique in protein identification experiments.

  17. Polytypism in LaOBi S2 -type compounds based on different three-dimensional stacking sequences of two-dimensional Bi S2 layers

    NASA Astrophysics Data System (ADS)

    Liu, Qihang; Zhang, Xiuwen; Zunger, Alex

    2016-05-01

    LaOBi S2 -type materials have drawn much attention recently because of various interesting physical properties, such as low-temperature superconductivity, hidden spin polarization, and electrically tunable Dirac cones. However, it was generally assumed that each LaOBi S2 -type compound has a unique and specific crystallographic structure (with a space group P 4 /nmm) separated from other phases. Using first-principles total energy and stability calculations we confirm that the previous assignment of the P 4 /nmm structure to LaOBi S2 is incorrect. Furthermore, we find that the unstable structure is replaced by a family of energetically closely spaced modifications (polytypes) differing by the layer sequences and orientations. We find that the local Bi-S distortion leads to three polytypes of LaOBi S2 with different stacking patterns of the distorted Bi S2 layers. The energy difference between the polytypes of LaOBi S2 is merely ˜1 meV/u.c., indicating the possible coexistence of all polytypes in the real sample and that the particular distribution of polytypes may be growth induced. The in-plane distortion can be suppressed by pressure, leading to a phase transition from polytypes to the high-symmetry P 4 /nmm structure with a pressure larger than 2.5 GPa. In addition, different choices of the intermediate atoms (replacing La) or active atoms (Bi S2 ) could also manifest different ground-state structures. One can thus tune the distortion and the ground state by pressure or by substituting covalence atoms in the LaOBi S2 family.

  18. Balance of Attraction and Repulsion in Nucleic-Acid Base Stacking: CCSD(T)/Complete-Basis-Set-Limit Calculations on Uracil Dimer and a Comparison with the Force-Field Description

    SciTech Connect

    Morgado, Claudio A.; Jurecka, Petr; Svozil, Daniel; Hobza, Pavel; Sponer, Jiri

    2009-06-09

    We have carried out reference quantum-chemical calculations for about 100 geometries of the uracil dimer in stacked conformations. The calculations have been specifically aimed at geometries with unoptimized distances between the monomers including geometries with mutually tilted monomers. Such geometries are characterized by a delicate balance between local steric clashes and local unstacking and had until now not been investigated using reference quantummechanics (QM) methods. Nonparallel stacking geometries often occur in nucleic acids and are of decisive importance, for example, for local conformational variations in B-DNA. Errors in the shortrange repulsion region would have a major impact on potential energy scans which were often used in the past to investigate local geometry variations in DNA. An incorrect description of such geometries may also partially affect molecular dynamics (MD) simulations in applications when quantitative accuracy is required. The reference QM calculations have been carried out using the MP2 method extrapolated to the complete basis-set limit and corrected for higher-order electron-correlation contributions using CCSD(T) calculations with a medium-sized basis set. These reference calculations have been used as benchmark data to test the performance of the DFT-D, SCS(MI)-MP2, and DFTSAPT QM methods and of the AMBER molecular-mechanics (MM) force field. The QM methods show close to quantitative agreement with the reference data, albeit the DFT-D method tends to modestly exaggerate the repulsion of steric clashes. The force field in general also provides a good description of base stacking for the systems studied here. However, for geometries with close interatomic contacts and clashes, the repulsion effects are rather severely exaggerated. The discrepancy reported here should not affect the overall stability of MD simulations and qualitative applications of the force field. However, it may affect the description of subtle

  19. Computational analysis of stacking interactions between 3-nitropyrrole and natural nucleobases.

    PubMed

    Ukawa, Hisashi; Seio, Kohji; Sekine, Mitsuo

    2002-01-01

    The stacking energies between natural nucleobases and a universal base of 3-nitropyrrole (3-NP) were calculated by use of two theoretically independent quantum chemical methods, namely, molecular orbital (MO) and density function theory (DFT) calculations. The parameters required for molecular mechanics calculation of 3-NP were obtained by use of a software of Direct Force Field and used to evaluate the stacking energy of the complexes formed between 3-NP and canonical four nucleobases. Dependence of the twist angle between the two stacked bases on the stacking energy was studied in great detail.

  20. Identifying the optimal gene and gene set in hepatocellular carcinoma based on differential expression and differential co-expression algorithm.

    PubMed

    Dong, Li-Yang; Zhou, Wei-Zhong; Ni, Jun-Wei; Xiang, Wei; Hu, Wen-Hao; Yu, Chang; Li, Hai-Yan

    2017-02-01

    The objective of this study was to identify the optimal gene and gene set for hepatocellular carcinoma (HCC) utilizing differential expression and differential co-expression (DEDC) algorithm. The DEDC algorithm consisted of four parts: calculating differential expression (DE) by absolute t-value in t-statistics; computing differential co-expression (DC) based on Z-test; determining optimal thresholds on the basis of Chi-squared (χ2) maximization and the corresponding gene was the optimal gene; and evaluating functional relevance of genes categorized into different partitions to determine the optimal gene set with highest mean minimum functional information (FI) gain (Δ*G). The optimal thresholds divided genes into four partitions, high DE and high DC (HDE-HDC), high DE and low DC (HDE-LDC), low DE and high DC (LDE‑HDC), and low DE and low DC (LDE-LDC). In addition, the optimal gene was validated by conducting reverse transcription-polymerase chain reaction (RT-PCR) assay. The optimal threshold for DC and DE were 1.032 and 1.911, respectively. Using the optimal gene, the genes were divided into four partitions including: HDE-HDC (2,053 genes), HED-LDC (2,822 genes), LDE-HDC (2,622 genes), and LDE-LDC (6,169 genes). The optimal gene was microtubule‑associated protein RP/EB family member 1 (MAPRE1), and RT-PCR assay validated the significant difference between the HCC and normal state. The optimal gene set was nucleoside metabolic process (GO\\GO:0009116) with Δ*G = 18.681 and 24 HDE-HDC partitions in total. In conclusion, we successfully investigated the optimal gene, MAPRE1, and gene set, nucleoside metabolic process, which may be potential biomarkers for targeted therapy and provide significant insight for revealing the pathological mechanism underlying HCC.

  1. Lightweight Stacks of Direct Methanol Fuel Cells

    NASA Technical Reports Server (NTRS)

    Narayanan, Sekharipuram; Valdez, Thomas

    2004-01-01

    An improved design concept for direct methanol fuel cells makes it possible to construct fuel-cell stacks that can weigh as little as one-third as much as do conventional bipolar fuel-cell stacks of equal power. The structural-support components of the improved cells and stacks can be made of relatively inexpensive plastics. Moreover, in comparison with conventional bipolar fuel-cell stacks, the improved fuel-cell stacks can be assembled, disassembled, and diagnosed for malfunctions more easily. These improvements are expected to bring portable direct methanol fuel cells and stacks closer to commercialization. In a conventional bipolar fuel-cell stack, the cells are interspersed with bipolar plates (also called biplates), which are structural components that serve to interconnect the cells and distribute the reactants (methanol and air). The cells and biplates are sandwiched between metal end plates. Usually, the stack is held together under pressure by tie rods that clamp the end plates. The bipolar stack configuration offers the advantage of very low internal electrical resistance. However, when the power output of a stack is only a few watts, the very low internal resistance of a bipolar stack is not absolutely necessary for keeping the internal power loss acceptably low.

  2. On monitoring and forecasting of graphite stack temperature in transient modes

    NASA Astrophysics Data System (ADS)

    Zagrebaev, A. M.; Ovsyannikova, N. V.; Ramazanov, R. N.

    2017-01-01

    The paper presents a method of monitoring and forecasting of the graphite stack temperature of the RBMK reactor in transient modes. The method is based on processing the in-core information about macro-distribution and mathematical model of distribution of temperature changes of the graphite stack in the reactor core. It is shown that the use of archival neutron field monitoring data allows determining the graphite stack temperature in the on-line mode.

  3. Correlative weighted stacking for seismic data in the wavelet domain

    USGS Publications Warehouse

    Zhang, S.; Xu, Y.; Xia, J.; ,

    2004-01-01

    Horizontal stacking plays a crucial role for modern seismic data processing, for it not only compresses random noise and multiple reflections, but also provides a foundational data for subsequent migration and inversion. However, a number of examples showed that random noise in adjacent traces exhibits correlation and coherence. The average stacking and weighted stacking based on the conventional correlative function all result in false events, which are caused by noise. Wavelet transform and high order statistics are very useful methods for modern signal processing. The multiresolution analysis in wavelet theory can decompose signal on difference scales, and high order correlative function can inhibit correlative noise, for which the conventional correlative function is of no use. Based on the theory of wavelet transform and high order statistics, high order correlative weighted stacking (HOCWS) technique is presented in this paper. Its essence is to stack common midpoint gathers after the normal moveout correction by weight that is calculated through high order correlative statistics in the wavelet domain. Synthetic examples demonstrate its advantages in improving the signal to noise (S/N) ration and compressing the correlative random noise.

  4. Attachment-Based Family Therapy: "Adherence" and Differentiation

    ERIC Educational Resources Information Center

    Diamond, Gary M.; Diamond, Guy S.; Hogue, Aaron

    2007-01-01

    This study examined the fidelity of attachment-based family therapy (ABFT) for depressed adolescents. Trained observers used the therapist behavior rating scale (3rd version) to code therapist behaviors in 45 sessions of ABFT and 45 sessions each from two empirically based treatments for adolescent substance abusers: multidimensional family…

  5. Video-Based Modeling: Differential Effects due to Treatment Protocol

    ERIC Educational Resources Information Center

    Mason, Rose A.; Ganz, Jennifer B.; Parker, Richard I.; Boles, Margot B.; Davis, Heather S.; Rispoli, Mandy J.

    2013-01-01

    Identifying evidence-based practices for individuals with disabilities requires specification of procedural implementation. Video-based modeling (VBM), consisting of both video self-modeling and video modeling with others as model (VMO), is one class of interventions that has frequently been explored in the literature. However, current information…

  6. Computations of Wall Distances Based on Differential Equations

    NASA Technical Reports Server (NTRS)

    Tucker, Paul G.; Rumsey, Chris L.; Spalart, Philippe R.; Bartels, Robert E.; Biedron, Robert T.

    2004-01-01

    The use of differential equations such as Eikonal, Hamilton-Jacobi and Poisson for the economical calculation of the nearest wall distance d, which is needed by some turbulence models, is explored. Modifications that could palliate some turbulence-modeling anomalies are also discussed. Economy is of especial value for deforming/adaptive grid problems. For these, ideally, d is repeatedly computed. It is shown that the Eikonal and Hamilton-Jacobi equations can be easy to implement when written in implicit (or iterated) advection and advection-diffusion equation analogous forms, respectively. These, like the Poisson Laplacian term, are commonly occurring in CFD solvers, allowing the re-use of efficient algorithms and code components. The use of the NASA CFL3D CFD program to solve the implicit Eikonal and Hamilton-Jacobi equations is explored. The re-formulated d equations are easy to implement, and are found to have robust convergence. For accurate Eikonal solutions, upwind metric differences are required. The Poisson approach is also found effective, and easiest to implement. Modified distances are not found to affect global outputs such as lift and drag significantly, at least in common situations such as airfoil flows.

  7. A High Volume Stack Sampler

    NASA Technical Reports Server (NTRS)

    Boubel, Richard W.

    1971-01-01

    The stack sampler described in this paper has been developed to overcome the difficulties of particulate sampling with presently available equipment. Its use on emissions from hog fuel fired boilers, back-fired incinerators, wigwam burners, asphalt plants, and seed cleaning cyclones is reported. The results indicate that the sampler is rapid and reliable in its use. It is relatively simple and inexpensive to operate. For most sources it should be considered over the more complicated and expensive sampling trains being used and specified.

  8. Differential microstrip lines with reduced crosstalk and common mode effect based on spoof surface plasmon polaritons.

    PubMed

    Wu, Jin Jei; Hou, Da Jun; Liu, Kexin; Shen, Linfang; Tsai, Chi An; Wu, Chien Jang; Tsai, Dichi; Yang, Tzong-Jer

    2014-11-03

    We apply the concept of spoof surface plasmon polaritons (SPPs) to the design of differential microstrip lines by introducing periodic subwavelength corrugations on their edges. The dispersion relation and field distribution of those lines are analyzed numerically. And then through designing practical coupling circuits, we found that compared with conventional differential microstrip lines, the electromagnetic field can be strongly confined inside the grooves of the corrugated microstrip lines, so the crosstalk between the differential pair and the adjacent microstrip lines is greatly reduced, and the conversion from the differential signal to the common mode signal can also be effectively suppressed. The propagation length of those lines is also very long in a wide band. Moreover, the experimental results in time domain demonstrate those lines perform very well in high-speed circuit. Therefore, those novel kinds of spoof SPPs based differential microstrip lines can be widely utilized in high-density microwave circuits and guarantee signal integrity in high-speed systems.

  9. Status of MCFC stack development at Hitachi

    SciTech Connect

    Takashima, S.; Kahara, T.; Takeuchi, M.

    1996-12-31

    Hitachi, Ltd. has been developing Molten Carbonate Fuel Cells in the New Sunshine project in Japan, and Hitachi is taking part in the development of 1,000kW MCFC pilot plant at Kawagoe. Hitachi is engaged in system planning of the 1,000kW pilot plant, design and manufacturing of the reformer subsystem and the fuel cell subsystem, and design and manufacturing of the 250kW stacks for the 1,000kW plant. The 250kW stacks are developed on the basis of the results of the 100kW stack in 1993 and the following 25kW stack in 1994. In parallel to the stack development, Hitachi is also conducting researches for long endurance cells and stacks. In addition to the researches for anode, cathode, electrolyte, and electrolyte matrix, improvement of temperature distribution in stacks is investigated to extend the stack life. This paper describes the planning status of the 250kW stacks for the 1,000kW MCFC plant and the developing status of stack cooling method for longer life.

  10. Vibration mode analysis of the proton exchange membrane fuel cell stack

    NASA Astrophysics Data System (ADS)

    Liu, B.; Liu, L. F.; Wei, M. Y.; Wu, C. W.

    2016-11-01

    Proton exchange membrane fuel cell (PEMFC) stacks usually undergo vibration during packing, transportation, and serving time, in particular for those used in the automobiles or portable equipment. To study the stack vibration response, based on finite element method (FEM), a mode analysis is carried out in the present paper. Using this method, we can distinguish the local vibration from the stack global modes, predict the vibration responses, such as deformed shape and direction, and discuss the effects of the clamping configuration and the clamping force magnitude on vibration modes. It is found that when the total clamping force remains the same, increasing the bolt number can strengthen the stack resistance to vibration in the clamping direction, but cannot obviously strengthen stack resistance to vibration in the translations perpendicular to clamping direction and the three axis rotations. Increasing the total clamping force can increase both of the stack global mode and the bolt local mode frequencies, but will decrease the gasket local mode frequency.

  11. Optical differentiation wavefront sensor based on binary pixelated transmission filters

    NASA Astrophysics Data System (ADS)

    Qiao, J.; Travinsky, A.; Ding, G.; Dorrer, C.

    2015-03-01

    High-resolution wavefront sensors are used in a wide range of applications. The Shack-Hartmann sensor is the industry standard and mostly used for this kind of analysis. However, with this sensor the analysis can only be performed for narrowband radiation, the recoverable curvature of the wavefront slopes is also restricted by the size of a single lens in the microlens array. The high-resolution Shack Hartmann wavefront sensor (>128×128) is also significantly expensive. The optical differentiation wavefront sensor, on the other hand, consists of only simple and therefore inexpensive components, offers greater signal to noise ratio, allows for high-resolution analysis of wavefront curvature, and is potentially capable of performing broadband measurements. When a transmission mask with linear attenuation along a spatial direction modulates the far field of an optical wave, the spatial wavefront slope along that direction can be recovered from the fluence in the near field after modulation. With two orthogonal measurements one can recover the complete wavefront of the optical wave. In this study the characteristics of such a wavefront sensor are investigated when the linear transmission modulation is implemented with a pixelated binary filter. Such a filter can be produced as a gray-scale quasi-continuous transmission pattern constructed using arrays of small (e.g., 10-micron) transparent or opaque pixels and therefore it can simply be fabricated by conventional lithography techniques. Simulations demonstrate the potential ability of such a pixelated filter to match the performance of a filter with continuously varying transmission, while offering the advantage of better transmission control and reduction of fabrication costs.

  12. Active cooling solutions for high power laser diodes stacks

    NASA Astrophysics Data System (ADS)

    Karni, Yoram; Klumel, Genady; Levy, Moshe; Berk, Yuri; Openhaim, Yaki; Gridish, Yaakov; Elgali, Asher; Avisar, Meir; Blonder, Moshe; Sagy, Hila; Gertsenshtein, Alex

    2008-02-01

    High power water cooled diode lasers find increasing demand in biomedical, cosmetic and industrial applications, where very high brightness and power are required. The high brightness is achieved either by increasing the power of each bar or by reducing the emitting area of the stacks. Two new products will be presented: Horizontal CW stacks with output power as high as 1kW using 80 W bars with emitting area width as low as 50 μm Vertical QCW stacks with output power as high as 1.2kW using 120 W bars. Heat removal from high power laser stacks often requires microchannel coolers operated with finely filtered deionized (DI) water. However, for certain industrial applications the reliability of this cooling method is widely considered insufficient due to leakage failures caused the highly corrosive DI water. Two solutions to the above problem will be discussed. A microchannel cooler-based package, which vastly reduces the corrosion problem, and a novel high-power laser diode stack that completely eliminates it. The latter solution is especially effective for pulsed applications in high duty cycle range.

  13. High peak power diode stacks for high energy lasers

    NASA Astrophysics Data System (ADS)

    Negoita, Viorel C.; Vethake, Thilo; Jiang, John; Roff, Robert; Shih, Ming; Duck, Richard; Bauer, Marc; Mite, Roberto; Boucke, Konstantin; Treusch, Georg

    2015-02-01

    High energy solid state lasers are being developed for fusion experiments and other research applications where high energy per pulse is required but the repetition rate is rather low, around 10Hz. We report our results on high peak power diode laser stacks used as optical pumps for these lasers. The stacks are based on 10 mm bars with 4 mm cavity length and 55% fill factor, with peak power exceeding 500 W per bar. These bars are stacked and mounted on a cooler which provides backside cooling and electrical insulation. Currently we mount 25 bars per cooler for a nominal peak power of 12.5 kW, but in principle the mounting scheme can be scaled to a different number of devices depending on the application. Pretesting of these bars before soldering on the cooler enables us to select devices with similar wavelength and thus we maintain tight control of the spectral width (FWHM less than 6 nm). Fine adjustments of the centroid wavelength can be done by means of temperature of the cooling fluid or bias current. The available wavelength range spans from 880 nm to 1000 nm, and the wavelength of the entire assembly of stacks can be controlled to within 0.5 nm of the target value, which makes these stacks suitable for pumping a variety of gain media. The devices are fast axis collimated, with over 95% power being collimated in 6 mrad (full angle). The slow axis divergence is 9° (full angle) for 95% power content.

  14. Mechanically stacked concentrator tandem solar cells

    NASA Technical Reports Server (NTRS)

    Andreev, V. M.; Rumyantsev, V. D.; Karlina, L. B.; Kazantsev, A. B.; Khvostikov, V. P.; Shvarts, M. Z.; Sorokina, S. V.

    1995-01-01

    Four-terminal mechanically stacked solar cells were developed for advanced space arrays with line-focus reflective concentrators. The top cells are based on AlGaAs/GaAs multilayer heterostructures prepared by low temperature liquid phase epitaxy. The bottom cells are based on heteroepitaxial InP/InGaAs liquid phase epitaxy or on homo-junction GaSb, Zn-diffused structures. The sum of the highest reached efficiencies of the top and bottom cells is 29.4 percent. The best four-terminal tandems have an efficiency of 27 to 28 percent. Solar cells were irradiated with 1 MeV electrons and their performances were determined as a function of fluence up to 10(exp 16) cm(exp-2). It was shown that the radiation resistance of developed tandem cells is similar to the most radiative stable AlGaAs/GaAs cells with a thin p-GaAs photoactive layer.

  15. Differential blood-based biomarkers of psychopathological dimensions of schizophrenia.

    PubMed

    Garcia-Alvarez, Leticia; Garcia-Portilla, Maria Paz; Gonzalez-Blanco, Leticia; Saiz Martinez, Pilar Alejandra; de la Fuente-Tomas, Lorena; Menendez-Miranda, Isabel; Iglesias, Celso; Bobes, Julio

    Symptomatology of schizophrenia is heterogeneous, there is not any pathognomonic symptom. Moreover, the diagnosis is difficult, since it is based on subjective information, instead of markers. The purpose of this study is to provide a review of the current status of blood-based biomarkers of psychopathological dimensions of schizophrenia. Inflammatory, hormonal or metabolic dysfunctions have been identified in patients with schizophrenia and it has attempted to establish biomarkers responsible for these dysfunctions. The identification of these biomarkers could contribute to the diagnosis and treatment of schizophrenia.

  16. SLM-based Fourier Differential Interference Contrast Microscopy

    NASA Astrophysics Data System (ADS)

    Noorizadeh, Sahand

    Optical phase microscopy provides a view of objects that have minimal to no effect on the detected intensity of light that are unobservable by standard microscopy techniques. Since its inception just over 60 years ago that gave us a vision to an unseen world and earned Frits Zernike the Nobel prize in physics in 1953, phase microscopy has evolved to find various applications in biological cell imaging, crystallography, semiconductor failure analysis, and more. Two common and commercially available techniques are phase contrast and differential interference contrast (DIC). In phase contrast method, a large portion of the unscattered light that accounts for the majority of the light passing unaffected through a transparent medium is blocked to allow the scattered light due to the object to be observed with higher contrast. DIC is a self-referenced interferometer that transduces phase variation to intensity variation. While being established as fundamental tools in many scientific and engineering disciplines, the traditional implementation of these techniques lacks the ability to provide the means for quantitative and repeatable measurement without an extensive and cumbersome calibration. The rapidly growing fields in modern biology meteorology and nano-technology have emphasized the demand for a more robust and convenient quantitative phase microscopy. The recent emergence of modern optical devices such as high resolution programmable spatial light modulators (SLM) has enabled a multitude of research activities over the past decade to reinvent phase microscopy in unconventional ways. This work is concerned with an implementation of a DIC microscope containing a 4-f system at its core with a programmable SLM placed at the frequency plane of the imaging system that allows for employing Fourier pair transforms for wavefront manipulation. This configuration of microscope provides a convenient way to perform both wavefront shearing with quantifiable arbitrary shear amount

  17. Differential orbital element-based spacecraft formation control strategies

    NASA Astrophysics Data System (ADS)

    Sobiesiak, Ludwik Andrew

    Spacecraft formation flight is an important technology for upcoming scientific and Earth observation missions. The topic of this work is the control of spacecraft formations specifically through the control of the differential, mean orbital elements of a spacecraft. Orbital perturbations can disturb formation geometry in an undesirable fashion so active control is required to maintain a precise relative trajectory. A number of control strategies are proposed. The first is an impulsive thrust strategy that is valid for formations in both eccentric and circular orbits. A general N-thrust per orbit formulation is presented. For the two-thrust case, an analytical solution to the constraint equations is presented and the closed-loop stability of the formation is considered. Two-thrust performance is shown to achieve superior position control with similar delta-V over previously proposed control strategies. The geomagnetic Lorentz force is a propellantless means of altering a spacecraft's orbit. A spacecraft with a significant surface charge experiences the Lorentz force due to the spacecraft's velocity relative to the Earth's magnetic field. Application of the Lorentz force to the formation control problem is a major contribution of this work. It is identified that the relative spacecraft state is not completely controllable with the Lorentz force alone, necessitating control strategies that combine conventional thruster actuation with the Lorentz force. Emphasis is placed on minimizing the thruster actuation and maximizing the use of the Lorentz force. Strategies that employ both continuous and impulsive thruster actuation with the Lorentz force are considered. Results show that the majority of the required actuation can be achieved using the Lorentz force. Investigation of optimal impulsive thrusting with continuous Lorentz force actuation motivates the development of novel optimal control theory for linear time-varying systems with both continuous and impulsive

  18. Spline based iterative phase retrieval algorithm for X-ray differential phase contrast radiography.

    PubMed

    Nilchian, Masih; Wang, Zhentian; Thuering, Thomas; Unser, Michael; Stampanoni, Marco

    2015-04-20

    Differential phase contrast imaging using grating interferometer is a promising alternative to conventional X-ray radiographic methods. It provides the absorption, differential phase and scattering information of the underlying sample simultaneously. Phase retrieval from the differential phase signal is an essential problem for quantitative analysis in medical imaging. In this paper, we formalize the phase retrieval as a regularized inverse problem, and propose a novel discretization scheme for the derivative operator based on B-spline calculus. The inverse problem is then solved by a constrained regularized weighted-norm algorithm (CRWN) which adopts the properties of B-spline and ensures a fast implementation. The method is evaluated with a tomographic dataset and differential phase contrast mammography data. We demonstrate that the proposed method is able to produce phase image with enhanced and higher soft tissue contrast compared to conventional absorption-based approach, which can potentially provide useful information to mammographic investigations.

  19. Thermal contact resistance in solid oxide fuel cell stacks

    NASA Astrophysics Data System (ADS)

    Dillig, Marius; Biedermann, Thomas; Karl, Jürgen

    2015-12-01

    For detailed thermal modelling of SOFC stacks, in particular research of improved thermal management, start-up and shut-down processes, thermal contact resistances (TCR) are required input parameters. These parameters are difficult to access analytically and strongly depend on temperature, geometry and material properties of the contact. Therefore, this work presents an experimental study of thermal contact resistance between different components of one SOFC stack repeating unit at varying temperatures up to typical operating temperatures (800 °C). Heat transfer rates are obtained for full repeating units, cell only, contact mesh only and sealing set-ups. Thermal interface resistances between interconnector and Ni-mesh, Ni-mesh and anode, cathode and interconnector as well as between interconnector and sealing are computed based on the measured data and provide information for numerical SOFC stack modelling.

  20. Thermo-Mechanical and Electrochemistry Modeling of Planar SOFC Stacks

    SciTech Connect

    Khaleel, Mohammad A. ); Recknagle, Kurtis P. ); Lin, Zijing; Deibler, John E. ); Chick, Lawrence A. ); Stevenson, Jeffry W. )

    2002-12-01

    Modeling activities at PNNL support design and development of modular SOFC systems. The SOFC stack modeling capability at PNNL has developed to a level at which planar stack designs can be compared and optimized for startup performance. Thermal-fluids and stress modeling is being performed to predict the transient temperature distribution and to determine the thermal stresses based on the temperature distribution. Current efforts also include the development of a model for calculating current density, cell voltage, and heat production in SOFC stacks with hydrogen or other fuels. The model includes the heat generation from both Joule heating and chemical reactions. It also accounts for species production and destruction via mass balance. The model is being linked to the finite element code MARC to allow for the evaluation of temperatures and stresses during steady state operations.

  1. Stacking fault induced tunnel barrier in platelet graphite nanofiber

    SciTech Connect

    Lan, Yann-Wen E-mail: ywlan@phys.sinica.edu.tw; Chang, Yuan-Chih; Chang, Chia-Seng; Chen, Chii-Dong E-mail: ywlan@phys.sinica.edu.tw; Chang, Wen-Hao; Li, Yuan-Yao

    2014-09-08

    A correlation study using image inspection and electrical characterization of platelet graphite nanofiber devices is conducted. Close transmission electron microscopy and diffraction pattern inspection reveal layers with inflection angles appearing in otherwise perfectly stacked graphene platelets, separating nanofibers into two domains. Electrical measurement gives a stability diagram consisting of alternating small-large Coulomb blockade diamonds, suggesting that there are two charging islands coupled together through a tunnel junction. Based on these two findings, we propose that a stacking fault can behave as a tunnel barrier for conducting electrons and is responsible for the observed double-island single electron transistor characteristics.

  2. Hydrogen Embrittlement And Stacking-Fault Energies

    NASA Technical Reports Server (NTRS)

    Parr, R. A.; Johnson, M. H.; Davis, J. H.; Oh, T. K.

    1988-01-01

    Embrittlement in Ni/Cu alloys appears related to stacking-fault porbabilities. Report describes attempt to show a correlation between stacking-fault energy of different Ni/Cu alloys and susceptibility to hydrogen embrittlement. Correlation could lead to more fundamental understanding and method of predicting susceptibility of given Ni/Cu alloy form stacking-fault energies calculated from X-ray diffraction measurements.

  3. Assessment of the 296-S-21 Stack Sampling Probe Location

    SciTech Connect

    Glissmeyer, John A.

    2006-09-08

    actual stack suggests that the other test results on the scale model are conservative relative to the actual stack. (3) Uniform Concentration of Tracer Gases--A uniform contaminant concentration in the sampling plane enables the extraction of samples that represent the true concentration. This was first tested using a tracer gas to represent gaseous effluents. The fan is a good mixer, so injecting the tracer downstream of the fans provides worst-case results. The acceptance criteria are that (1) the COV of the measured tracer gas concentration is ?20% across the center two-thirds of the sampling plane and (2) at no point in the sampling plane does the concentration vary from the mean by >30%. The results on the scale model at the point simulating the sampling probe ranged from 0.3 to 6 %COV, and the maximum single point deviation from the mean was -10%. (4) Uniform Concentration of Tracer Particles--Uniformity in contaminant concentration at the sampling probe was further demonstrated using tracer particles large enough to exhibit inertial effects. Particles of 10-?m aerodynamic diameter were used. The acceptance criterion is that the COV of particle concentration is ?20% across the center two-thirds of the sampling plane. The scale model results ranged form 2 to 9%. Based on these tests, the location of the air sampling probe on the 296-S-21 stack meets the requirements of the ANSI/HPS N13.1-1999 standard.

  4. 3D differential phase contrast microscopy

    NASA Astrophysics Data System (ADS)

    Chen, Michael; Tian, Lei; Waller, Laura

    2016-03-01

    We demonstrate three-dimensional (3D) optical phase and amplitude reconstruction based on coded source illumination using a programmable LED array. Multiple stacks of images along the optical axis are computed from recorded intensities captured by multiple images under off-axis illumination. Based on the first Born approximation, a linear differential phase contrast (DPC) model is built between 3D complex index of refraction and the intensity stacks. Therefore, 3D volume reconstruction can be achieved via a fast inversion method, without the intermediate 2D phase retrieval step. Our system employs spatially partially coherent illumination, so the transverse resolution achieves twice the NA of coherent systems, while axial resolution is also improved 2× as compared to holographic imaging.

  5. Flexible interconnects for fuel cell stacks

    DOEpatents

    Lenz, David J.; Chung, Brandon W.; Pham, Ai Quoc

    2004-11-09

    An interconnect that facilitates electrical connection and mechanical support with minimal mechanical stress for fuel cell stacks. The interconnects are flexible and provide mechanically robust fuel cell stacks with higher stack performance at lower cost. The flexible interconnects replace the prior rigid rib interconnects with flexible "fingers" or contact pads which will accommodate the imperfect flatness of the ceramic fuel cells. Also, the mechanical stress of stacked fuel cells will be smaller due to the flexibility of the fingers. The interconnects can be one-sided or double-sided.

  6. Film stacking architecture for immersion lithography process

    NASA Astrophysics Data System (ADS)

    Goto, Tomohiro; Sanada, Masakazu; Miyagi, Tadashi; Shigemori, Kazuhito; Kanaoka, Masashi; Yasuda, Shuichi; Tamada, Osamu; Asai, Masaya

    2008-03-01

    In immersion lithography process, film stacking architecture will be necessary due to film peeling. However, the architecture will restrict lithographic area within a wafer due to top side EBR accuracy In this paper, we report an effective film stacking architecture that also allows maximum lithographic area. This study used a new bevel rinse system on RF3 for all materials to make suitable film stacking on the top side bevel. This evaluation showed that the new bevel rinse system allows the maximum lithographic area and a clean wafer edge. Patterning defects were improved with suitable film stacking.

  7. ooi: OpenStack OCCI interface

    NASA Astrophysics Data System (ADS)

    López García, Álvaro; Fernández del Castillo, Enol; Orviz Fernández, Pablo

    In this document we present an implementation of the Open Grid Forum's Open Cloud Computing Interface (OCCI) for OpenStack, namely ooi (Openstack occi interface, 2015) [1]. OCCI is an open standard for management tasks over cloud resources, focused on interoperability, portability and integration. ooi aims to implement this open interface for the OpenStack cloud middleware, promoting interoperability with other OCCI-enabled cloud management frameworks and infrastructures. ooi focuses on being non-invasive with a vanilla OpenStack installation, not tied to a particular OpenStack release version.

  8. Differential Reprogramming Based on Constructive Interference for Wireless Sensor Network

    NASA Astrophysics Data System (ADS)

    Hu, Bing; Sun, Zhixin

    2016-09-01

    To improve the performance of reprogramming in wireless sensor network, we present a novel reprogramming structure and constructive interference-based dissemination protocol (CIDP) to transmit the patch through out the network fast and reliability. CIDP disseminates the patch, which is divided into several packets, to the network exploiting constructive interference. We evaluate our implementation of CIDP using simulation under different number of nodes. Our results show that CIDP disseminates the patch less than 4 milliseconds. In general, the probability of a node receives the complete patch as high as 99.99%.

  9. Facility 135, east side view, can on right, ship's stack ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    Facility 135, east side view, can on right, ship's stack on left, view facing west - U.S. Naval Base, Pearl Harbor, Latrines, Off Avenue C, at Repair Basins B13, B15-B18 & B20, Pearl City, Honolulu County, HI

  10. Partial differential equations-based segmentation for radiotherapy treatment planning.

    PubMed

    Gibou, Frederic; Levy, Doron; Cardenas, Carlos; Liu, Pingyu; Boyer, Arthur

    2005-04-01

    The purpose of this study is to develop automatic algorithms for the segmentation phase of radiotherapy treatment planning. We develop new image processing techniques that are based on solving a partial diferential equation for the evolution of the curve that identifies the segmented organ. The velocity function is based on the piecewise Mumford-Shah functional. Our method incorporates information about the target organ into classical segmentation algorithms. This information, which is given in terms of a three- dimensional wireframe representation of the organ, serves as an initial guess for the segmentation algorithm. We check the performance of the new algorithm on eight data sets of three diferent organs: rectum, bladder, and kidney. The results of the automatic segmentation were compared with a manual seg- mentation of each data set by radiation oncology faculty and residents. The quality of the automatic segmentation was measured with the k-statistics", and with a count of over- and undersegmented frames, and was shown in most cases to be very close to the manual segmentation of the same data. A typical segmentation of an organ with sixty slices takes less than ten seconds on a Pentium IV laptop.

  11. Instructionally Differentiated Programming. A Needs-Based Approach for Students with Behavior Disorders.

    ERIC Educational Resources Information Center

    Cessna, K. Kay; And Others

    This monograph offers six papers which present a model to assist in developing instructionally differentiated programming based on individual needs for students with behavioral disorders. The first three chapters focus on underlying philosophies. A paper by Myron Swize titled "Colorado's Needs-Based Approach" stresses that it is more…

  12. MTR STACK, TRA71, DETAIL OF PUMICE BLOCK SERVICE BUILDING AT ...

    Library of Congress Historic Buildings Survey, Historic Engineering Record, Historic Landscapes Survey

    MTR STACK, TRA-71-, DETAIL OF PUMICE BLOCK SERVICE BUILDING AT BASE OF STACK. CAMERA FACING SOUTHEAST. INL NEGATIVE NO. HD52-1-2. Mike Crane, Photographer, 5/2005 - Idaho National Engineering Laboratory, Test Reactor Area, Materials & Engineering Test Reactors, Scoville, Butte County, ID

  13. Performance evaluation of PEFC stack

    SciTech Connect

    Fujita, Jun-ichi; Ohtsuki, Jitsuji; Shindo, Yoshihiko

    1996-12-31

    Polymer electrolyte fuel cells (PEFCs) have many advantages such as high current density, short start-up time and endurance for start-stop cycles. Making use of these advantages, Fuji Electric has been working with the Kansai Electric Power Co., Inc. to explore practical applications of PEFCs for an electric utility use. Since large-sized electrodes are required in the electric utility applications, we have fabricated 600cm{sup 2} membrane-electrode assemblies by using hot-press method. We have also designed a cell structure to realize a uniform reaction over the electrodes. The structure includes a properly-shaped gas flow channel, a temperature-gradient cooling system. Using the 600cm{sup 2} (25x24cm) electrodes, a 30-cell stack (5kW) were constructed and tested.

  14. Debuncher Cooling Limitations to Stacking

    SciTech Connect

    Halling, Mike

    1991-08-13

    During the January studies period we performed studies to determine the effect that debuncher cooling has on the stacking rate. Two different sets of measurements were made separated by about a week. Most measurements reported here are in PBAR log 16, page 243-247. These measurements were made by changing the accelerator timeline to give about 6 seconds between 29's, and then gating the cooling systems to simulate reduced cycle times. For the measurement of the momentum cooling effectiveness the gating switches could not be made to work, so the timeline was changed for each measurement. The cooling power of all three systems was about 800 watts for the tests reported here. We now regularly run at 1200 watts per system.

  15. Optimal Sampling-Based Motion Planning under Differential Constraints: the Driftless Case

    PubMed Central

    Schmerling, Edward; Janson, Lucas; Pavone, Marco

    2015-01-01

    Motion planning under differential constraints is a classic problem in robotics. To date, the state of the art is represented by sampling-based techniques, with the Rapidly-exploring Random Tree algorithm as a leading example. Yet, the problem is still open in many aspects, including guarantees on the quality of the obtained solution. In this paper we provide a thorough theoretical framework to assess optimality guarantees of sampling-based algorithms for planning under differential constraints. We exploit this framework to design and analyze two novel sampling-based algorithms that are guaranteed to converge, as the number of samples increases, to an optimal solution (namely, the Differential Probabilistic RoadMap algorithm and the Differential Fast Marching Tree algorithm). Our focus is on driftless control-affine dynamical models, which accurately model a large class of robotic systems. In this paper we use the notion of convergence in probability (as opposed to convergence almost surely): the extra mathematical flexibility of this approach yields convergence rate bounds — a first in the field of optimal sampling-based motion planning under differential constraints. Numerical experiments corroborating our theoretical results are presented and discussed. PMID:26618041

  16. A Variable Order Fractional Differential-Based Texture Enhancement Algorithm with Application in Medical Imaging.

    PubMed

    Yu, Qiang; Vegh, Viktor; Liu, Fawang; Turner, Ian

    2015-01-01

    Texture enhancement is one of the most important techniques in digital image processing and plays an essential role in medical imaging since textures discriminate information. Most image texture enhancement techniques use classical integral order differential mask operators or fractional differential mask operators using fixed fractional order. These masks can produce excessive enhancement of low spatial frequency content, insufficient enhancement of large spatial frequency content, and retention of high spatial frequency noise. To improve upon existing approaches of texture enhancement, we derive an improved Variable Order Fractional Centered Difference (VOFCD) scheme which dynamically adjusts the fractional differential order instead of fixing it. The new VOFCD technique is based on the second order Riesz fractional differential operator using a Lagrange 3-point interpolation formula, for both grey scale and colour image enhancement. We then use this method to enhance photographs and a set of medical images related to patients with stroke and Parkinson's disease. The experiments show that our improved fractional differential mask has a higher signal to noise ratio value than the other fractional differential mask operators. Based on the corresponding quantitative analysis we conclude that the new method offers a superior texture enhancement over existing methods.

  17. Agent-based modeling of osteogenic differentiation of mesenchymal stem cells in porous biomaterials.

    PubMed

    Bayrak, Elif S; Mehdizadeh, Hamidreza; Akar, Banu; Somo, Sami I; Brey, Eric M; Cinar, Ali

    2014-01-01

    Mesenchymal stem cells (MSC) have shown promise in tissue engineering applications due to their potential for differentiating into mesenchymal tissues such as osteocytes, chondrocytes, and adipocytes and releasing proteins to promote tissue regeneration. One application involves seeding MSCs in biomaterial scaffolds to promote osteogenesis in the repair of bone defects following implantation. However, predicting in vivo survival and differentiation of MSCs in biomaterials is challenging. Rapid and stable vascularization of scaffolds is required to supply nutrients and oxygen that MSCs need to survive as well as to go through osteogenic differentiation. The objective of this study is to develop an agent-based model and simulator that can be used to investigate the effects of using gradient growth factors on survival and differentiation of MSCs seeded in scaffolds. An agent-based model is developed to simulate the MSC behavior. The effect of vascular endothelial growth factor (VEGF) and bone morphogenic protein-2 (BMP-2) on both survival and osteogenic differentiation is studied. Results showed that the survival ratio of MSCs can be enhanced by increasing VEGF concentration. BMP-2 caused a slight increase on survival ratio. Osteogenesis strongly depends on the VEGF concentration as well because of its effect on vascularization. BMP-2 increased the osteogenic differentiation of MSCs.

  18. Differential Survival in Europe and the United States: Estimates Based on Subjective Probabilities of Survival

    PubMed Central

    Delavande, Adeline; Rohwedder, Susann

    2013-01-01

    Cross-country comparisons of differential survival by socioeconomic status (SES) are useful in many domains. Yet, to date, such studies have been rare. Reliably estimating differential survival in a single country has been challenging because it requires rich panel data with a large sample size. Cross-country estimates have proven even more difficult because the measures of SES need to be comparable internationally. We present an alternative method for acquiring information on differential survival by SES. Rather than using observations of actual survival, we relate individuals’ subjective probabilities of survival to SES variables in cross section. To show that subjective survival probabilities are informative proxies for actual survival when estimating differential survival, we compare estimates of differential survival based on actual survival with estimates based on subjective probabilities of survival for the same sample. The results are remarkably similar. We then use this approach to compare differential survival by SES for 10 European countries and the United States. Wealthier people have higher survival probabilities than those who are less wealthy, but the strength of the association differs across countries. Nations with a smaller gradient appear to be Belgium, France, and Italy, while the United States, England, and Sweden appear to have a larger gradient. PMID:22042664

  19. A Variable Order Fractional Differential-Based Texture Enhancement Algorithm with Application in Medical Imaging

    PubMed Central

    Yu, Qiang; Vegh, Viktor

    2015-01-01

    Texture enhancement is one of the most important techniques in digital image processing and plays an essential role in medical imaging since textures discriminate information. Most image texture enhancement techniques use classical integral order differential mask operators or fractional differential mask operators using fixed fractional order. These masks can produce excessive enhancement of low spatial frequency content, insufficient enhancement of large spatial frequency content, and retention of high spatial frequency noise. To improve upon existing approaches of texture enhancement, we derive an improved Variable Order Fractional Centered Difference (VOFCD) scheme which dynamically adjusts the fractional differential order instead of fixing it. The new VOFCD technique is based on the second order Riesz fractional differential operator using a Lagrange 3-point interpolation formula, for both grey scale and colour image enhancement. We then use this method to enhance photographs and a set of medical images related to patients with stroke and Parkinson’s disease. The experiments show that our improved fractional differential mask has a higher signal to noise ratio value than the other fractional differential mask operators. Based on the corresponding quantitative analysis we conclude that the new method offers a superior texture enhancement over existing methods. PMID:26186221

  20. Testing a model of codependency for college students in Taiwan based on Bowen's concept of differentiation.

    PubMed

    Chang, Shih-Hua

    2016-04-01

    The purpose of this study was to test a model of codependency based on Bowen's concept of differentiation for college students in Taiwan. The relations between family-of-origin dysfunction, differentiation of self, codependency traits and related symptoms including low self-esteem, relationship distress and psychological adjustment problems were examined. Data were collected from 567 college students from 2 large, urban universities in northern Taiwan. Results indicated a significantly negative relationship between levels of codependency and self-differentiation and that self-differentiation partially mediated the relationship between family-of-origin dysfunction and codependency. The implications of these findings for counselling Taiwanese college students who experience codependency traits and related symptoms as well as suggestions for future research are discussed.

  1. Piezoelectric stack transducer evaluation and comparison for optimized energy harvesting

    NASA Astrophysics Data System (ADS)

    Gamboa, Bryan

    Lead Zirconate Titanate (PZT) is the most prevalent piezoelectric material used around the world. These materials are used in a wide array of devices across a vast group of applications. The primary focus of this research is on the application and optimization of direct piezoelectric effect in energy harvesting from low frequency mechanical vibration. The specific research aim is at understanding the stacked PZT transducers in their mechanisms and performance on effective electromechanical energy conversion. Piezoelectric power output has been determined based on understanding of the fundamental concepts in composites (1:3 bi-phasic) and stack transducers. Several property structure relations are evaluated by various experimental methods including the utilization of electrodynamic test systems (Acumen III and the Universal Testing Machine 25, both by MTS Systems Corp.). The converted power is monitored and recorded using pc interfaced digital multimeter (Metrahit by Messtechnik GmbH). Power evaluation is compared among several samples in order to understand the most efficient configuration utilizing PZT ceramics. Impedance measurements, piezoelectric coefficients and permittivity calculations are evaluated to more accurately compare the samples. Power density as function of applied mechanical force and pressure, are calculated and compared with experimental results which yield good agreement. Three types of stack PZT transducers were compared and systemically tested for their electromechanical power conversion performance. While 1:3 composite stack PZT transducer was found to be the best performer in term of power density per active volume, the custom fabricated stack PZT transducers (UTSA stack sample) were found to have the highest power density per total transducer volume, 0.615 muW/mm3, measured at 965 kN/m2 (140 PSI), among the three types studied.

  2. Gender-based wage differentials among registered dietitians.

    PubMed

    Pollard, Prudence; Taylor, Maxine; Daher, Noha

    2007-01-01

    The debate on compensation equity is broad-based, addressing many organizational, personal, and outcome factors. Central to compensation philosophy is the issue of gender equity. Health care, like many other industries, remains fraught with gender inequity in compensation. This inequity is partially explained by choice of practice area. However, much remains unexplained. Health care is a female-dominated industry with most of the women working in the allied health professions (eg, nurses, dietitians, etc). Registered dietitians (RD) may experience wage discrimination, similar to registered nurses, but prior to the present study, the assumption was not tested. Using data from the first comprehensive study of RD compensation, we examined gender equity in total cash compensation to RDs. Data were collected on total cash compensation, and questions focused on career progression and work outcomes. For purposes of our study, we analyzed data on 5,477 full-time RDs. Ninety-six percent were women, the median age was 43, and median total cash compensation for RDs employed in the position for at least 1 year was $45,500.00. Women earned $45,285.00 and men earned $50,250.00. A median wage gap of $4,965.00 between women and men was observed. Variability in total cash compensation to women was best explained by size of budget, years of experience, work setting, and educational level. Variability for men was explained by size of budget, years of experience, educational level, and employer status. Conclusions suggest that given the wage discrimination that female RDs experience, work organizations should evaluate their pay plans to monitor pay equity. Factors that women can manage to receive compensation that is equal to that of the men include size of budgets they manage, years of experience in the field, employer status, work setting, and educational level attained. Findings are useful for career advisers, human resource specialists, compensation specialists, supervisors, RDs

  3. A bundled-stack discotic columnar liquid crystalline phase with inter-stack electronic coupling

    DOE PAGES

    Wang, Bin; Sun, Runkun; Günbaş, Duygu D.; ...

    2015-06-15

    The first compound proving to be capable of forming a bundled-stack discotic columnar liquid crystalline (BSDCLC) phase was designed and synthesized. Finally, the unique perylene anhydride inter-stack interaction was found to be the key to the formation of the BSDCLC structure and inter-stack electronic coupling (ISEC).

  4. Harnessing cellular differentiation to improve ALA-based photodynamic therapy in an artificial skin model

    NASA Astrophysics Data System (ADS)

    Maytin, Edward; Anand, Sanjay; Sato, Nobuyuki; Mack, Judith; Ortel, Bernhard

    2005-04-01

    During ALA-based photodynamic therapy (PDT), a pro-drug (aminolevulinic acid; ALA) is taken up by tumor cells and metabolically converted to a photosensitizing intermediate (protoporphyrin IX; PpIX). ALA-based PDT, while an emerging treatment modality, remains suboptimal for most cancers (e.g. squamous cell carcinoma of the skin). Many treatment failures may be largely due to insufficient conversion of ALA to PpIX within cells. We discovered a novel way to increase the conversion of ALA to PpIX, by administering agents that can drive terminal differentiation (i.e., accelerate cellular maturation). Terminally-differentiated epithelial cells show higher levels of intracellular PpIX, apparently via increased levels of a rate-limiting enzyme, coproporphyrinogen oxidase (CPO). To study these mechanisms in a three-dimensional tissue, we developed an organotypic model that mimics true epidermal physiology in a majority of respects. A line of rat epidermal keratinocytes (REKs), when grown in raft cultures, displays all the features of a fully-differentiated epidermis. Addition of ALA to the culture medium results in ALA uptake and PpIX synthesis, with subsequent death of keratinocytes upon exposure to blue light. Using this model, we can manipulate cellular differentiation via three different approaches. (1) Vitamin D, a hormone that enhances keratinocyte differentiation; (2) Hoxb13, a nuclear transcription factor that affects the genetically-controlled differentiation program of stratifying cells (3) Hyaluronan, an abundant extracellular matrix molecule that regulates epidermal differentiation. Because the raft cultures contain only a single cell type (no blood, fibroblasts, etc.) the effects of terminal differentiation upon CPO, PpIX, and keratinocyte cell death can be specifically defined.

  5. Collage-based approaches for elliptic partial differential equations inverse problems

    NASA Astrophysics Data System (ADS)

    Yodzis, Michael; Kunze, Herb

    2017-01-01

    The collage method for inverse problems has become well-established in the literature in recent years. Initial work developed a collage theorem, based upon Banach's fixed point theorem, for treating inverse problems for ordinary differential equations (ODEs). Amongst the subsequent work was a generalized collage theorem, based upon the Lax-Milgram representation theorem, useful for treating inverse problems for elliptic partial differential equations (PDEs). Each of these two different approaches can be applied to elliptic PDEs in one space dimension. In this paper, we explore and compare how the two different approaches perform for the estimation of the diffusivity for a steady-state heat equation.

  6. Effective Stack Design in Air Pollution Control.

    ERIC Educational Resources Information Center

    Clarke, John H.

    1968-01-01

    Stack design problems fall into two general caterories--(1) those of building re-entry, and (2) those of general area pollution. Extensive research has developed adequate information, available in the literature, to permit effective stack design. A major roadblock to effective design has been the strong belief by architects and engineers that high…

  7. Optical in-situ monitoring system for simultaneous measurement of thickness and curvature of thick layer stacks during hydride vapor phase epitaxy growth of GaN

    NASA Astrophysics Data System (ADS)

    Semmelroth, K.; Berwian, P.; Schröter, C.; Leibiger, G.; Schönleber, M.; Friedrich, J.

    2015-10-01

    For improved real-time process control we integrated a novel optical in-situ monitoring system in a vertical reactor for hydride vapor phase epitaxy (HVPE) growth of gallium nitride (GaN) bulk crystals. The in-situ monitoring system consists of a fiber-optical interferometric sensor in combination with an optimized differential measuring head. The system only needs one small optical path perpendicular to the center of the layer stack typically consisting of sapphire as substrate and GaN. It can handle sample distances up to 1 m without difficulty. The in-situ monitoring system is simultaneously measuring the optical layer thicknesses of the GaN/sapphire layer stack and the absolute change of the distance between the measuring head and the backside of the layer stack. From this data it is possible to calculate the thickness of the growing GaN up to a thickness of about 1000 μm and the absolute change in curvature of the layer stack. The performance of the in-situ monitoring system is shown and discussed based on the measured interference signals recorded during a short-time and a long-time HVPE growth run.

  8. Status of MCFC stack technology at IHI

    SciTech Connect

    Hosaka, M.; Morita, T.; Matsuyama, T.; Otsubo, M.

    1996-12-31

    The molten carbonate fuel cell (MCFC) is a promising option for highly efficient power generation possible to enlarge. IHI has been studying parallel flow MCFC stacks with internal manifolds that have a large electrode area of 1m{sup 2}. IHI will make two 250 kW stacks for MW plant, and has begun to make cell components for the plant. To improve the stability of stack, soft corrugated plate used in the separator has been developed, and a way of gathering current from stacks has been studied. The DC output potential of the plant being very high, the design of electric insulation will be very important. A 20 kW short stack test was conducted in 1995 FY to certificate some of the improvements and components of the MW plant. These activities are presented below.

  9. A Cell-Based High-Throughput Screening for Inducers of Myeloid Differentiation

    PubMed Central

    Radomska, Hanna S.; Jernigan, Finith; Nakayama, Sohei; Jorge, Susan E.; Sun, Lijun; Tenen, Daniel G.; Kobayashi, Susumu S.

    2015-01-01

    Recent progress of genetic studies has dramatically unveiled pathogenesis of acute myeloid leukemia (AML). However, overall survival of AML still remains unsatisfactory and development of novel therapeutics is required. CCAAT/Enhancer Binding Protein α (C/EBPα) is one of crucial transcription factors that induce granulocytic differentiation and its activity is perturbed in human myeloid leukemias. As its re-expression can induce differentiation and subsequent apoptosis of leukemic cells in vitro, we hypothesized that chemical compounds that restore C/EBPα expression and/or activity would lead to myeloid differentiation of leukemic cells. Using a cell-based high-throughput screening, we identified 2-[(E)-2-(3,4-dihydroxyphenyl)vinyl]-3-(2-methoxyphenyl)-4(3H)-quinazolinone as a potent inducer of C/EBPα and myeloid differentiation. Leukemia cell lines and primary blast cells isolated from human AML patients treated with ICCB280 demonstrated evidence of morphological and functional differentiation, as well as massive apoptosis. We performed conformational analyses of the high-throughput screening hit compounds to postulate the spatial requirements for high potency. Our results warrant a development of novel differentiation therapies and significantly impact care of AML patients with unfavorable prognosis in the near future. PMID:26109609

  10. A Hybrid Approach to Protein Differential Expression in Mass Spectrometry-Based Proteomics

    SciTech Connect

    Wang, Xuan; Anderson, Gordon A.; Smith, Richard D.; Dabney, Alan R.

    2012-04-19

    Motivation: Quantitative mass spectrometry-based proteomics involves statistical inference on protein abundance, based on the intensities of each protein's associated spectral peaks. However, typical MS-based proteomics data sets have substantial proportions of missing observations, due at least in part to censoring of low intensities. This complicates intensity-based differential expression analysis. Results: We outline a statistical method for protein differential expression, based on a simple Binomial likelihood. By modeling peak intensities as binary, in terms of 'presence/ absence,' we enable the selection of proteins not typically amendable to quantitative analysis; e.g., 'one-state' proteins that are present in one condition but absent in another. In addition, we present an analysis protocol that combines quantitative and presence/ absence analysis of a given data set in a principled way, resulting in a single list of selected proteins with a single associated FDR.

  11. Stacking of lamellae in Mg/Al hydrotalcites: Effect of metal ion concentrations on morphology

    SciTech Connect

    Panda, H.S.; Srivastava, R.; Bahadur, D.

    2008-06-03

    A hybrid nanocomposite based on the intercalation of carbonate anion has been synthesized through co-precipitation technique. Powder X-ray diffraction patterns (PXRD) showed pure layered double hydroxide (LDH) phases having crystallite size around 20 and 13 nm in 'a' and 'c' crystallographic directions, respectively. Fourier transform infrared and Raman spectroscopy measurements exhibit shifting of bands with increase of divalent metal ion concentration and it further suggests the presence of carbonate anions. Differential scanning calorimetry (DSC) and thermogravimetry analysis (TGA) exhibit the three stages of thermal degradation, which is characteristic behaviour of layered double hydroxide. CHN and energy dispersive X-ray analysis support the PXRD and spectroscopy results. The nature of charge observed through Zeta potential analyzer is positive. Transmission electron microscope (TEM) exhibits the characteristic LDH platelet morphology with the platelets stacked one above the other.

  12. Probing Temperature Inside Planar SOFC Short Stack, Modules, and Stack Series

    NASA Astrophysics Data System (ADS)

    Yu, Rong; Guan, Wanbing; Zhou, Xiao-Dong

    2017-02-01

    Probing temperature inside a solid oxide fuel cell (SOFC) stack lies at the heart of the development of high-performance and stable SOFC systems. In this article, we report our recent work on the direct measurements of the temperature in three types of SOFC systems: a 5-cell short stack, a 30-cell stack module, and a stack series consisting of two 30-cell stack modules. The dependence of temperature on the gas flow rate and current density was studied under a current sweep or steady-state operation. During the current sweep, the temperature inside the 5-cell stack decreased with increasing current, while it increased significantly at the bottom and top of the 30-cell stack. During a steady-state operation, the temperature of the 5-cell stack was stable while it was increased in the 30-cell stack. In the stack series, the maximum temperature gradient reached 190°C when the gas was not preheated. If the gas was preheated and the temperature gradient was reduced to 23°C in the stack series with the presence of a preheating gas and segmented temperature control, this resulted in a low degradation rate.

  13. Optimization on photoelectric detection based on stacked La{sub 0.9}Sr{sub 0.1}MnO{sub 3-{delta}}/LaAlO{sub 3-{delta}} multijunctions

    SciTech Connect

    Jie Xing; Hui Yinghao; Er Jiaguo; Fang Yang

    2011-08-01

    Three multijunctions consisting of La{sub 0.9}Sr{sub 0.1}MnO{sub 3-{delta}} and LaAlO{sub 3-{delta}} on Si substrate have been fabricated under different oxygen pressures by laser molecular beam epitaxy. They exhibit nonlinear and rectifying current-voltage characteristics and evident photocurrent response to He-Ne laser illumination. Experimental results indicate that the periodically stacked multijunction grown under lower oxygen pressure shows a better rectification behavior and a higher photocurrent. The photovoltaic responsivities of the multijunctions are enhanced greatly at reverse bias and are much higher than that of a similarly grown single p-n junction. Based on the band structure of the multilayers, a possible mechanism of the photovoltaic process was proposed. A high photovoltage responsivity of 168.6 mV/mW has been achieved at - 6 V bias; this demonstrates the potential of the present multijunction configuration for photodetectors operating at room temperature.

  14. Differentially Private Frequent Sequence Mining via Sampling-based Candidate Pruning

    PubMed Central

    Xu, Shengzhi; Cheng, Xiang; Li, Zhengyi; Xiong, Li

    2016-01-01

    In this paper, we study the problem of mining frequent sequences under the rigorous differential privacy model. We explore the possibility of designing a differentially private frequent sequence mining (FSM) algorithm which can achieve both high data utility and a high degree of privacy. We found, in differentially private FSM, the amount of required noise is proportionate to the number of candidate sequences. If we could effectively reduce the number of unpromising candidate sequences, the utility and privacy tradeoff can be significantly improved. To this end, by leveraging a sampling-based candidate pruning technique, we propose a novel differentially private FSM algorithm, which is referred to as PFS2. The core of our algorithm is to utilize sample databases to further prune the candidate sequences generated based on the downward closure property. In particular, we use the noisy local support of candidate sequences in the sample databases to estimate which sequences are potentially frequent. To improve the accuracy of such private estimations, a sequence shrinking method is proposed to enforce the length constraint on the sample databases. Moreover, to decrease the probability of misestimating frequent sequences as infrequent, a threshold relaxation method is proposed to relax the user-specified threshold for the sample databases. Through formal privacy analysis, we show that our PFS2 algorithm is ε-differentially private. Extensive experiments on real datasets illustrate that our PFS2 algorithm can privately find frequent sequences with high accuracy. PMID:26973430

  15. Integration processes of ordinary differential equations based on Laguerre-Radau interpolations

    NASA Astrophysics Data System (ADS)

    Guo, Ben-Yu; Wang, Zhong-Qing; Tian, Hong-Jiong; Wang, Li-Lian

    2008-03-01

    In this paper, we propose two integration processes for ordinary differential equations based on modified Laguerre-Radau interpolations, which are very efficient for long-time numerical simulations of dynamical systems. The global convergence of proposed algorithms are proved. Numerical results demonstrate the spectral accuracy of these new approaches and coincide well with theoretical analysis.

  16. Using Task Based Writing Instruction to Provide Differentiated Instruction for English Language Learners

    ERIC Educational Resources Information Center

    Bantis, Alexandros Merkouris

    2008-01-01

    The purpose of this study was to investigate the impact of task based writing instruction (TBwI) on English language acquisition and differentiated instruction for minority language students during the Independent Work Time instructional component of the Open Court Reading program. One teacher and 10 third grade students (8-9 years old)…

  17. Introduction of the Notion of Differential Equations by Modelling Based Teaching

    ERIC Educational Resources Information Center

    Budinski, Natalija; Takaci, Djurdjica

    2011-01-01

    This paper proposes modelling based learning as a tool for learning and teaching mathematics. The example of modelling real world problems leading to the exponential function as the solution of differential equations is described, as well as the observations about students' activities during the process. The students were acquainted with the…

  18. Standards-Based Curriculum, Differentiated Instruction, and End of Course Assessments

    ERIC Educational Resources Information Center

    Hartnell, Benjamin Jeffry

    2011-01-01

    Differentiated instruction, standards-based curriculum, and end of course assessments (ECAs) are not mandated in most high schools across the United States. As such, classroom grades do not accurately reflect district report cards. In particular, grades at the study site, a suburban high school, do not show the specific standards and benchmarks…

  19. PCL-PDMS-PCL copolymer-based microspheres mediate cardiovascular differentiation from embryonic stem cells

    NASA Astrophysics Data System (ADS)

    Song, Liqing

    Poly-epsilon-caprolactone (PCL) based copolymers have received much attention as drug or growth factor delivery carriers and tissue engineering scaffolds due to their biocompatibility, biodegradability, and tunable biophysical properties. Copolymers of PCL and polydimethylsiloxane (PDMS) also have shape memory behaviors and can be made into thermoresponsive shape memory polymers for various biomedical applications such as smart sutures and vascular stents. However, the influence of biophysical properties of PCL-PDMS-PCL copolymers on stem cell lineage commitment is not well understood. In this study, PDMS was used as soft segments of varying length to tailor the biophysical properties of PCL-based co-polymers. While low elastic modulus (<10 kPa) of the tri-block copolymer PCL-PDMS-PCL affected cardiovascular differentiation of embryonic stem cells, the range of 60-100 MPa PCL-PDMS-PCL showed little influence on the differentiation. Then different size (30-140 mum) of microspheres were fabricated from PCL-PDMS-PCL copolymers and incorporated within embryoid bodies (EBs). Mesoderm differentiation was induced using bone morphogenetic protein (BMP)-4 for cardiovascular differentiation. Differential expressions of mesoderm progenitor marker KDR and vascular markers CD31 and VE-cadherin were observed for the cells differentiated from EBs incorporated with microspheres of different size, while little difference was observed for cardiac marker alpha-actinin expression. Small size of microspheres (30 mum) resulted in higher expression of KDR while medium size of microspheres (94 mum) resulted in higher CD31 and VE-cadherin expression. This study indicated that the biophysical properties of PCL-based copolymers impacted stem cell lineage commitment, which should be considered for drug delivery and tissue engineering applications.

  20. Novel fuel cell stack with coupled metal hydride containers

    NASA Astrophysics Data System (ADS)

    Liu, Zhixiang; Li, Yan; Bu, Qingyuan; Guzy, Christopher J.; Li, Qi; Chen, Weirong; Wang, Cheng

    2016-10-01

    Air-cooled, self-humidifying hydrogen fuel cells are often used for backup and portable power sources, with a metal hydride used as the hydrogen storage material. To provide a stable hydrogen flow to the fuel cell stack, heat must be provided to the metal hydride. Conventionally, the heat released from the exothermic reaction of hydrogen and oxygen in the fuel cell stack to the exhaust air is used to heat a separate metal hydride container. In this case, the heat is only partially used instead of being more closely coupled because of the heat transfer resistances in the system. To achieve better heat integration, a novel scheme is proposed whereby hydrogen storage and single fuel cells are more closely coupled. Based on this idea, metal hydride containers in the form of cooling plates were assembled between each pair of cells in the stack so that the heat could be directly transferred to a metal hydride container of much larger surface-to-volume ratio than conventional separate containers. A heat coupled fuel cell portable power source with 10 cells and 11 metal hydride containers was constructed and the experimental results show that this scheme is beneficial for the heat management of fuel cell stack.

  1. Do Stacked Species Distribution Models Reflect Altitudinal Diversity Patterns?

    PubMed Central

    Mateo, Rubén G.; Felicísimo, Ángel M.; Pottier, Julien; Guisan, Antoine; Muñoz, Jesús

    2012-01-01

    The objective of this study was to evaluate the performance of stacked species distribution models in predicting the alpha and gamma species diversity patterns of two important plant clades along elevation in the Andes. We modelled the distribution of the species in the Anthurium genus (53 species) and the Bromeliaceae family (89 species) using six modelling techniques. We combined all of the predictions for the same species in ensemble models based on two different criteria: the average of the rescaled predictions by all techniques and the average of the best techniques. The rescaled predictions were then reclassified into binary predictions (presence/absence). By stacking either the original predictions or binary predictions for both ensemble procedures, we obtained four different species richness models per taxa. The gamma and alpha diversity per elevation band (500 m) was also computed. To evaluate the prediction abilities for the four predictions of species richness and gamma diversity, the models were compared with the real data along an elevation gradient that was independently compiled by specialists. Finally, we also tested whether our richness models performed better than a null model of altitudinal changes of diversity based on the literature. Stacking of the ensemble prediction of the individual species models generated richness models that proved to be well correlated with the observed alpha diversity richness patterns along elevation and with the gamma diversity derived from the literature. Overall, these models tend to overpredict species richness. The use of the ensemble predictions from the species models built with different techniques seems very promising for modelling of species assemblages. Stacking of the binary models reduced the over-prediction, although more research is needed. The randomisation test proved to be a promising method for testing the performance of the stacked models, but other implementations may still be developed. PMID

  2. Design of Novel FBG-Based Sensor of Differential Pressure with Magnetic Transfer.

    PubMed

    Lyu, Guohui; Che, Guohang; Li, Junqing; Jiang, Xu; Wang, Keda; Han, Yueqiang; Gao, Laixu

    2017-02-15

    In this paper, a differential pressure sensor with magnetic transfer is proposed, in which the non-electric measurement based on the fiber Bragg grating (FBG) with the position limiting mechanism is implemented without the direct contact of the sensing unit with the measuring fluid. The test shows that the designed sensor is effective for measuring differential pressure in the range of 0~10 kPa with a sensitivity of 0.0112 nm/kPa, which can be used in environments with high temperature, strong corrosion and high overload measurements.

  3. High-order all-optical differential equation solver based on microring resonators.

    PubMed

    Tan, Sisi; Xiang, Lei; Zou, Jinghui; Zhang, Qiang; Wu, Zhao; Yu, Yu; Dong, Jianji; Zhang, Xinliang

    2013-10-01

    We propose and experimentally demonstrate a feasible integrated scheme to solve all-optical differential equations using microring resonators (MRRs) that is capable of solving first- and second-order linear ordinary differential equations with different constant coefficients. Employing two cascaded MRRs with different radii, an excellent agreement between the numerical simulation and the experimental results is obtained. Due to the inherent merits of silicon-based devices for all-optical computing, such as low power consumption, small size, and high speed, this finding may motivate the development of integrated optical signal processors and further extend optical computing technologies.

  4. Design of Novel FBG-Based Sensor of Differential Pressure with Magnetic Transfer

    PubMed Central

    Lyu, Guohui; Che, Guohang; Li, Junqing; Jiang, Xu; Wang, Keda; Han, Yueqiang; Gao, Laixu

    2017-01-01

    In this paper, a differential pressure sensor with magnetic transfer is proposed, in which the non-electric measurement based on the fiber Bragg grating (FBG) with the position limiting mechanism is implemented without the direct contact of the sensing unit with the measuring fluid. The test shows that the designed sensor is effective for measuring differential pressure in the range of 0~10 kPa with a sensitivity of 0.0112 nm/kPa, which can be used in environments with high temperature, strong corrosion and high overload measurements. PMID:28212272

  5. Hard solder 20-kW QCW stack array diode laser

    NASA Astrophysics Data System (ADS)

    Li, Xiaoning; Kang, Lijun; Wang, Jingwei; Zhang, Pu; Xiong, Lingling; Liu, Xingsheng

    2012-03-01

    With the increasing applications of high power semiconductor lasers in industry, advanced manufacturing, aerospace, medical systems, display, entertainment, etc., semiconductor lasers with high power and high performances are required. The performance of semiconductor lasers is greatly affected by packaging structure, packaging process and beam shaping. A novel macro channel cooler (MaCC) for stack array laser with good heat dissipation capacity and high reliability is presented in this work. Based on the MaCC package, a high power stack array diode laser is successfully fabricated. A series of techniques such as spectrum control and beam control are used to achieve narrow spectrum and high beam quality. The performances of the semiconductor laser stack array are characterized. A high power 20kW QCW hard solder packaged stack array laser is fabricated; a narrow spectrum of 3.94 nm and an excellent rectangular beam shape are obtained. The lifetime of the stack array laser is tested as well.

  6. Mapping of Bernal and non-Bernal stacking domains in bilayer graphene using infrared nanoscopy.

    PubMed

    Jeong, Gyouil; Choi, Boogeon; Kim, Deok-Soo; Ahn, Seongjin; Park, Baekwon; Kang, Jin Hyoun; Min, Hongki; Hong, Byung Hee; Kim, Zee Hwan

    2017-03-23

    Bilayer graphene (BLG) shows great potential as a new material for opto-electronic devices because its bandgap can be controlled by varying the stacking orders, as well as by applying an external electric field. An imaging technique that can visualize and characterize various stacking domains in BLG may greatly help in fully utilizing such properties of BLG. Here we demonstrate that infrared (IR) scattering-type scanning near-field optical microscopy (sSNOM) can visualize Bernal and non-Bernal stacking domains of BLG, based on the stacking-specific inter- and intra-band optical conductivities. The method enables nanometric mapping of stacking domains in BLG on dielectric substrates, augmenting current limitations of Raman spectroscopy and electron microscopy techniques for the structural characterization of BLG.

  7. Two stage bioethanol refining with multi litre stacked microbial fuel cell and microbial electrolysis cell.

    PubMed

    Sugnaux, Marc; Happe, Manuel; Cachelin, Christian Pierre; Gloriod, Olivier; Huguenin, Gérald; Blatter, Maxime; Fischer, Fabian

    2016-12-01

    Ethanol, electricity, hydrogen and methane were produced in a two stage bioethanol refinery setup based on a 10L microbial fuel cell (MFC) and a 33L microbial electrolysis cell (MEC). The MFC was a triple stack for ethanol and electricity co-generation. The stack configuration produced more ethanol with faster glucose consumption the higher the stack potential. Under electrolytic conditions ethanol productivity outperformed standard conditions and reached 96.3% of the theoretically best case. At lower external loads currents and working potentials oscillated in a self-synchronized manner over all three MFC units in the stack. In the second refining stage, fermentation waste was converted into methane, using the scale up MEC stack. The bioelectric methanisation reached 91% efficiency at room temperature with an applied voltage of 1.5V using nickel cathodes. The two stage bioethanol refining process employing bioelectrochemical reactors produces more energy vectors than is possible with today's ethanol distilleries.

  8. Regional and global benthic δ18O stacks for the last glacial cycle

    NASA Astrophysics Data System (ADS)

    Lisiecki, Lorraine E.; Stern, Joseph V.

    2016-10-01

    Although detailed age models exist for some marine sediment records of the last glacial cycle (0-150 ka), age models for many cores rely on the stratigraphic correlation of benthic δ18O, which measures ice volume and deep ocean temperature change. The large amount of data available for the last glacial cycle offers the opportunity to improve upon previous benthic δ18O compilations, such as the "LR04" global stack. Not only are the age constraints for the LR04 stack now outdated but a single global alignment target neglects regional differences of several thousand years in the timing of benthic δ18O change during glacial terminations. Here we present regional stacks that characterize mean benthic δ18O change for 8 ocean regions and a volume-weighted global stack of data from 263 cores. Age models for these stacks are based on radiocarbon data from 0 to 40 ka, correlation to a layer-counted Greenland ice core from 40 to 56 ka, and correlation to radiometrically dated speleothems from 56 to 150 ka. The regional δ18O stacks offer better stratigraphic alignment targets than the LR04 global stack and, furthermore, suggest that the LR04 stack is biased 1-2 kyr too young throughout the Pleistocene. Finally, we compare global and regional benthic δ18O responses with sea level estimates for the last glacial cycle.

  9. Modeling and simulation of a PEM fuel cell stack considering temperature effects

    NASA Astrophysics Data System (ADS)

    Shan, Yuyao; Choe, Song-Yul

    Management of the water and heat ejected as byproducts in an operating PEM fuel cell stack are crucial factors in their optimal design and safe operations. Models currently available for a PEM fuel cell are based on either empirical or 3-D computational fluid dynamics (CFD). Both models do not fully meet the need to represent physical behavior of a stack because of either their simplicity or complexity. We propose a highly dynamic PEM fuel cell stack model, taking into account the most influential property of temperature affecting performance and dynamics. Simulations have been conducted to analyze start-up behaviors and the performance of the stack in conjunction with the cells. Our analyses demonstrate static and dynamic behaviors of a stack. Major results presented are as follows: (1) operating dependent temperature gradient across through-plane direction of the fuel cell stack, (2) endplate effects on the temperature profile during start-up process, (3) temperature profile influences on the output voltage of individual cells and the stack, (4) temperature influence on the water content in membranes of different cells, and (5) cathode inlet relative humidity influence on the temperature profile of the stack.

  10. Passive stacks in a multifamily housing project

    SciTech Connect

    Saum, D.

    1995-12-31

    The Summerfield multi-family, 1242 unit housing project that has been under construction since 1993 in Prince Georges County Maryland near Washington, DC suggests that passive stacks provides significant radon mitigation in multi-family construction. Random radon tests in these buildings indicate an average indoor ground floor concentration of 0.3 pCi/L with the stacks open, and 1.3 pCi/L with the stacks sealed. These buildings were built with post-tension slabs which should be more airtight than conventional floating slabs, and measurements show that the pressure field extension in these slabs in very good.

  11. Dynamical stability of slip-stacking particles

    SciTech Connect

    Eldred, Jeffrey; Zwaska, Robert

    2014-09-01

    We study the stability of particles in slip-stacking configuration, used to nearly double proton beam intensity at Fermilab. We introduce universal area factors to calculate the available phase space area for any set of beam parameters without individual simulation. We find perturbative solutions for stable particle trajectories. We establish Booster beam quality requirements to achieve 97% slip-stacking efficiency. We show that slip-stacking dynamics directly correspond to the driven pendulum and to the system of two standing-wave traps moving with respect to each other.

  12. Differential Brillouin fiber sensor based on phase difference on double-sideband pump wave

    NASA Astrophysics Data System (ADS)

    Lin, Wenqiao; Hong, Xiaobin; Yang, Zhisheng; Wu, Jian; Lin, Jintong

    2015-06-01

    A configuration based on phase difference on a double-sideband pump wave is proposed to detect the differential variation of temperature or strain in single-mode optical fibers. In our configuration, a probe wave only experiences a differential Brillouin gain contributed by the perturbation of temperature or strain in the sensing fiber. As a result, the power limitation of the probe wave can be alleviated and the photodetector in our configuration does not easily become saturated in the case of a longer sensing range. The spatial resolution is determined by the duration of the phase difference on the two sidebands and the signal-to-noise of our system is nearly twice as high as that of a differential pulse-width pair Brillouin optical time domain analysis sensor since a π-phase shift on the pump wave is employed. The properties and performances of our method are also theoretically derived and experimentally validated.

  13. A micro resonant charge sensor with enhanced sensitivity based on differential sensing scheme and leverage mechanisms

    NASA Astrophysics Data System (ADS)

    Chen, Dongyang; Zhao, Jiuxuan; Xu, Zhonggui; Xie, Jin

    2016-10-01

    This letter reports a micro-electro-mechanical systems (MEMS) resonant charge sensor with enhanced sensitivity based on differential sensing scheme and leverage mechanisms. The sensor comprises two symmetrically-distributed double-ended tuning fork (DETF) resonators, each of which connects with dual micro-leverage mechanisms. The micro-leverages amplify electrostatic force in opposite directions and cause differential frequency shift of the two resonators. Both the resonators show a similar trend in behaviors of electrical and mechanical nonlinearity. Effect of environment disturbance is suppressed by the differential sensing scheme. The measured sensitivity of the two resonators are 3.31×10-4 Hz/fC2 and 1.85×10-4 Hz/fC2 respectively, and an overall sensitivity for the resonant charge sensor is 5.16×10-4 Hz/fC2.

  14. Speed Measurement and Motion Analysis of Chang'E-3 Rover Based on Differential Phase Delay

    NASA Astrophysics Data System (ADS)

    Chao, Pan; Qing-hui, Liu; Xin, Zheng; Qing-bao, He; Ya-jun, Wu

    2016-04-01

    On 14th December 2013, the Chang'E-3 made a successful soft landing on the lunar surface, and then carried out the tasks of separating the lander and the rover, and taking pictures of each other. With the same beam VLBI (Very Long Baseline Interferometry) technique to observe the signals transmitted by the lander and the rover simultaneously, the differential phase delay between them is calculated, which can reflect the minor changes of the rover's position on a scale of a few centimeters. Based on the high sensitivity of differential phase delay, the rover's speeds during 5 movements are obtained with an average of 0.056 m/s. The relationship between the rover's shake in the moving process and the lunar terrain is analyzed by using the spectrum of the residual of the differential phase delay after the first-order polynomial fitting.

  15. Speed Measurement and Motion Analysis of Chang'E-3 Rover Based on Differential Phase Delay

    NASA Astrophysics Data System (ADS)

    Pan, C.; Liu, Q. H.; Zheng, X.; He, Q. B.; Wu, Y. J.

    2015-07-01

    On 2013 December 14, the Chang'E-3 made a successful soft landing on the lunar surface, and then carried out the tasks of separating the lander and the rover, and taking the photos of each other. With the same beam VLBI (Very long baseline interferometry) technique to observe the signals transmitted by the lander and the rover simultaneously, the differential phase delay between them is calculated, which can reflect a minor change of the rover's position on a scale of a few centimeters. Based on the high sensitivity of differential phase delay, the rover's speeds during 5 movements are obtained with an average of 0.056 m/s. The relationship between the rover's shake in moving process, and lunar terrain is analyzed by using the spectrum of the residual of the differential phase delay after the first-order polynomial fitting.

  16. Molecular drag model based on differential reduction of the Kruger-Shapiro equations

    NASA Astrophysics Data System (ADS)

    Helmer, J. C.; Levi, G.

    2002-07-01

    The history of the method of differential probability in molecular flow is reviewed, beginning with the little known derivation by D. Santeler (5th Annual Symposium on Space Environmental Simulation, Arnold Air Force Station, TN, May, 1964), based on the equation of C. W. Oatley [Br. J. Appl. Phys. 8, 15 (1957)]. This method contains the aperture correction within the theory, without phenomenological assumptions. A new equation of this type, for molecular pumping, is derived by differential reduction of the Kruger-Shapiro equations. A simple solution of the differential equations yields results of good accuracy for engineering use. The physical characteristics of molecular pumping are clarified by describing the pressure distribution within the pumping tube as if it were a conductance. By this method the calculated performance of a model pump is shown to be in satisfactory agreement with a Clausing-type solution from a previous publication. copyright 2002 American Vacuum Society.

  17. Stacked vapor fed amtec modules

    DOEpatents

    Sievers, Robert K.

    1989-01-01

    The present invention pertains to a stacked AMTEC module. The invention includes a tubular member which has an interior. The member is comprised of a ion conductor that substantially conducts ions relative to electrons, preferably a beta"-alumina solid electrolyte, positioned about the interior. A porous electrode for conducting electrons and allowing sodium ions to pass therethrough, and wherein electrons and sodium ions recombine to form sodium is positioned about the beta"-alumina solid electrolyte. The electrode is operated at a temperature and a pressure that allows the recombined sodium to vaporize. Additionally, an outer current collector grid for distributing electrons throughout the porous electrode is positioned about and contacts the porous electrode. Also included in the invention is transporting means for transporting liquid sodium to the beta"-alumina solid electrolyte of the tubular member. A transition piece is positioned about the interior of the member and contacts the transporting means. The transition piece divides the member into a first cell and a second cell such that each first and second cell has a beta"-alumina solid electrolyte, a first and second porous electrode and a grid. The transition piece conducts electrons from the interior of the tubular member. There is supply means for supplying sodium to the transporting means. Preferably the supply means is a shell which surrounds the tubular member and is operated at a temperature such that the vaporized sodium condenses thereon. Returning means for returning the condensed sodium from the shell to the transporting means provides a continuous supply of liquid sodium to the transporting means. Also, there are first conducting means for conducting electric current from the transition piece which extends through the shell, and second conducting means for conducting electric current to the grid of the first cell which extends through the shell.

  18. Phosphorene/rhenium disulfide heterojunction-based negative differential resistance device for multi-valued logic.

    PubMed

    Shim, Jaewoo; Oh, Seyong; Kang, Dong-Ho; Jo, Seo-Hyeon; Ali, Muhammad Hasnain; Choi, Woo-Young; Heo, Keun; Jeon, Jaeho; Lee, Sungjoo; Kim, Minwoo; Song, Young Jae; Park, Jin-Hong

    2016-11-07

    Recently, negative differential resistance devices have attracted considerable attention due to their folded current-voltage characteristic, which presents multiple threshold voltage values. Because of this remarkable property, studies associated with the negative differential resistance devices have been explored for realizing multi-valued logic applications. Here we demonstrate a negative differential resistance device based on a phosphorene/rhenium disulfide (BP/ReS2) heterojunction that is formed by type-III broken-gap band alignment, showing high peak-to-valley current ratio values of 4.2 and 6.9 at room temperature and 180 K, respectively. Also, the carrier transport mechanism of the BP/ReS2 negative differential resistance device is investigated in detail by analysing the tunnelling and diffusion currents at various temperatures with the proposed analytic negative differential resistance device model. Finally, we demonstrate a ternary inverter as a multi-valued logic application. This study of a two-dimensional material heterojunction is a step forward toward future multi-valued logic device research.

  19. Phosphorene/rhenium disulfide heterojunction-based negative differential resistance device for multi-valued logic

    PubMed Central

    Shim, Jaewoo; Oh, Seyong; Kang, Dong-Ho; Jo, Seo-Hyeon; Ali, Muhammad Hasnain; Choi, Woo-Young; Heo, Keun; Jeon, Jaeho; Lee, Sungjoo; Kim, Minwoo; Song, Young Jae; Park, Jin-Hong

    2016-01-01

    Recently, negative differential resistance devices have attracted considerable attention due to their folded current–voltage characteristic, which presents multiple threshold voltage values. Because of this remarkable property, studies associated with the negative differential resistance devices have been explored for realizing multi-valued logic applications. Here we demonstrate a negative differential resistance device based on a phosphorene/rhenium disulfide (BP/ReS2) heterojunction that is formed by type-III broken-gap band alignment, showing high peak-to-valley current ratio values of 4.2 and 6.9 at room temperature and 180 K, respectively. Also, the carrier transport mechanism of the BP/ReS2 negative differential resistance device is investigated in detail by analysing the tunnelling and diffusion currents at various temperatures with the proposed analytic negative differential resistance device model. Finally, we demonstrate a ternary inverter as a multi-valued logic application. This study of a two-dimensional material heterojunction is a step forward toward future multi-valued logic device research. PMID:27819264

  20. The key role of dislocation dissociation in the plastic behaviour of single crystal nickel-based superalloy with low stacking fault energy: Three-dimensional discrete dislocation dynamics modelling

    NASA Astrophysics Data System (ADS)

    Huang, Minsheng; Li, Zhenhuan

    2013-12-01

    To model the deformation of single crystal nickel based superalloys (SCNBS) with low stacking fault energy (SFE), three-dimensional discrete dislocation dynamics (3D-DDD) is extended by incorporating dislocation dissociation mechanism. The present 3D-DDD simulations show that, consistent with the existing TEM observation, the leading partial can enter the matrix channel efficiently while the trailing partial can hardly glide into it when the dislocation dissociation is taken into account. To determine whether the dislocation dissociation can occur or not, a critical percolation stress (CPS) based criterion is suggested. According to this CPS criterion, for SCNBS there exists a critical matrix channel width. When the channel width is lower than this critical value, the dislocation tends to dissociate into an extended configuration and vice versa. To clarify the influence of dislocation dissociation on CPS, the classical Orowan formula is improved by incorporating the SFE. Moreover, the present 3D-DDD simulations also show that the yielding stress of SCNBSs with low SFE may be overestimated up to 30% if the dislocation dissociation is ignored. With dislocation dissociation being considered, the size effect due to the width of γ matrix channel and the length of γ‧ precipitates on the stress-strain responses of SCNBS can be enhanced remarkably. In addition, due to the strong constraint effect by the two-phase microstructure in SCNBS, the configuration of formed junctions is quite different from that in single phase crystals such as Cu. The present results not only provide clear understanding of the two-phase microstructure levelled microplastic mechanisms in SCNBSs with low SFE, but also help to develop new continuum-levelled constitutive laws for SCNBSs.

  1. A study of microstructural characteristics and differential thermal analysis of Ni-based superalloys

    NASA Technical Reports Server (NTRS)

    Aggarwal, M. D.; Lal, R. B.; Oyekenu, Samuel A.; Parr, Richard; Gentz, Stephen

    1989-01-01

    The objective of this work is to correlate the mechanical properties of the Ni-based superalloy MAR M246(Hf) used in the Space Shuttle Main Engine with its structural characteristics by systematic study of optical photomicrographs and differential thermal analysis. The authors developed a method of predicting the liquidus and solidus temperature of various nickel based superalloys (MAR-M247, Waspaloy, Udimet-41, polycrystalline and single crystals of CMSX-2 and CMSX-3) and comparing the predictions with the experimental differential thermal analysis (DTA) curves using Perkin-Elmer DTA 1700. The method of predicting these temperatures is based on the additive effect of the components dissolved in nickel. The results were compared with the experimental values.

  2. A Lateral Differential Resonant Pressure Microsensor Based on SOI-Glass Wafer-Level Vacuum Packaging

    PubMed Central

    Xie, Bo; Xing, Yonghao; Wang, Yanshuang; Chen, Jian; Chen, Deyong; Wang, Junbo

    2015-01-01

    This paper presents the fabrication and characterization of a resonant pressure microsensor based on SOI-glass wafer-level vacuum packaging. The SOI-based pressure microsensor consists of a pressure-sensitive diaphragm at the handle layer and two lateral resonators (electrostatic excitation and capacitive detection) on the device layer as a differential setup. The resonators were vacuum packaged with a glass cap using anodic bonding and the wire interconnection was realized using a mask-free electrochemical etching approach by selectively patterning an Au film on highly topographic surfaces. The fabricated resonant pressure microsensor with dual resonators was characterized in a systematic manner, producing a quality factor higher than 10,000 (~6 months), a sensitivity of about 166 Hz/kPa and a reduced nonlinear error of 0.033% F.S. Based on the differential output, the sensitivity was increased to two times and the temperature-caused frequency drift was decreased to 25%. PMID:26402679

  3. A Lateral Differential Resonant Pressure Microsensor Based on SOI-Glass Wafer-Level Vacuum Packaging.

    PubMed

    Xie, Bo; Xing, Yonghao; Wang, Yanshuang; Chen, Jian; Chen, Deyong; Wang, Junbo

    2015-09-21

    This paper presents the fabrication and characterization of a resonant pressure microsensor based on SOI-glass wafer-level vacuum packaging. The SOI-based pressure microsensor consists of a pressure-sensitive diaphragm at the handle layer and two lateral resonators (electrostatic excitation and capacitive detection) on the device layer as a differential setup. The resonators were vacuum packaged with a glass cap using anodic bonding and the wire interconnection was realized using a mask-free electrochemical etching approach by selectively patterning an Au film on highly topographic surfaces. The fabricated resonant pressure microsensor with dual resonators was characterized in a systematic manner, producing a quality factor higher than 10,000 (~6 months), a sensitivity of about 166 Hz/kPa and a reduced nonlinear error of 0.033% F.S. Based on the differential output, the sensitivity was increased to two times and the temperature-caused frequency drift was decreased to 25%.

  4. Development and Applications of a Stage Stacking Procedure

    NASA Technical Reports Server (NTRS)

    Kulkarni, Sameer; Celestina, Mark L.; Adamczyk, John J.

    2012-01-01

    The preliminary design of multistage axial compressors in gas turbine engines is typically accomplished with mean-line methods. These methods, which rely on empirical correlations, estimate compressor performance well near the design point, but may become less reliable off-design. For land-based applications of gas turbine engines, off-design performance estimates are becoming increasingly important, as turbine plant operators desire peaking or load-following capabilities and hot-day operability. The current work develops a one-dimensional stage stacking procedure, including a newly defined blockage term, which is used to estimate the off-design performance and operability range of a 13-stage axial compressor used in a power generating gas turbine engine. The new blockage term is defined to give mathematical closure on static pressure, and values of blockage are shown to collapse to curves as a function of stage inlet flow coefficient and corrected shaft speed. In addition to these blockage curves, the stage stacking procedure utilizes stage characteristics of ideal work coefficient and adiabatic efficiency. These curves are constructed using flow information extracted from computational fluid dynamics (CFD) simulations of groups of stages within the compressor. Performance estimates resulting from the stage stacking procedure are shown to match the results of CFD simulations of the entire compressor to within 1.6% in overall total pressure ratio and within 0.3 points in overall adiabatic efficiency. Utility of the stage stacking procedure is demonstrated by estimation of the minimum corrected speed which allows stable operation of the compressor. Further utility of the stage stacking procedure is demonstrated with a bleed sensitivity study, which estimates a bleed schedule to expand the compressors operating range.

  5. Near-Earth Asteroid Stack - Mission Animation

    NASA Video Gallery

    A possible stack configuration - a deep space habitat, the Orion Multi-Purpose Crew Vehicle and Space Exploration Vehicle - approaches a near-Earth asteroid. During a mission that could take months...

  6. Characterization of Piezoelectric Stacks for Space Applications

    NASA Technical Reports Server (NTRS)

    Sherrit, Stewart; Jones, Christopher; Aldrich, Jack; Blodget, Chad; Bao, Xiaoqi; Badescu, Mircea; Bar-Cohen, Yoseph

    2008-01-01

    Future NASA missions are increasingly seeking to actuate mechanisms to precision levels in the nanometer range and below. Co-fired multilayer piezoelectric stacks offer the required actuation precision that is needed for such mechanisms. To obtain performance statistics and determine reliability for extended use, sets of commercial PZT stacks were tested in various AC and DC conditions at both nominal and high temperatures and voltages. In order to study the lifetime performance of these stacks, five actuators were driven sinusoidally for up to ten billion cycles. An automated data acquisition system was developed and implemented to monitor each stack's electrical current and voltage waveforms over the life of the test. As part of the monitoring tests, the displacement, impedance, capacitance and leakage current were measured to assess the operation degradation. This paper presents some of the results of this effort.

  7. 40 CFR 61.33 - Stack sampling.

    Code of Federal Regulations, 2012 CFR

    2012-07-01

    ... EMISSION STANDARDS FOR HAZARDOUS AIR POLLUTANTS National Emission Standard for Beryllium § 61.33 Stack... Administrator. (d) All samples shall be analyzed and beryllium emissions shall be determined within 30...

  8. 40 CFR 61.33 - Stack sampling.

    Code of Federal Regulations, 2014 CFR

    2014-07-01

    ... EMISSION STANDARDS FOR HAZARDOUS AIR POLLUTANTS National Emission Standard for Beryllium § 61.33 Stack... results reported to the Administrator. (d) All samples shall be analyzed and beryllium emissions shall...

  9. 40 CFR 61.33 - Stack sampling.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... EMISSION STANDARDS FOR HAZARDOUS AIR POLLUTANTS National Emission Standard for Beryllium § 61.33 Stack... Administrator. (d) All samples shall be analyzed and beryllium emissions shall be determined within 30...

  10. 40 CFR 61.33 - Stack sampling.

    Code of Federal Regulations, 2013 CFR

    2013-07-01

    ... EMISSION STANDARDS FOR HAZARDOUS AIR POLLUTANTS National Emission Standard for Beryllium § 61.33 Stack... Administrator. (d) All samples shall be analyzed and beryllium emissions shall be determined within 30...

  11. 40 CFR 61.33 - Stack sampling.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... EMISSION STANDARDS FOR HAZARDOUS AIR POLLUTANTS National Emission Standard for Beryllium § 61.33 Stack... Administrator. (d) All samples shall be analyzed and beryllium emissions shall be determined within 30...

  12. Data-Mining-Based Intelligent Differential Relaying for Transmission Lines Including UPFC and Wind Farms.

    PubMed

    Jena, Manas Kumar; Samantaray, Subhransu Ranjan

    2016-01-01

    This paper presents a data-mining-based intelligent differential relaying scheme for transmission lines, including flexible ac transmission system device, such as unified power flow controller (UPFC) and wind farms. Initially, the current and voltage signals are processed through extended Kalman filter phasor measurement unit for phasor estimation, and 21 potential features are computed at both ends of the line. Once the features are extracted at both ends, the corresponding differential features are derived. These differential features are fed to a data-mining model known as decision tree (DT) to provide the final relaying decision. The proposed technique has been extensively tested for single-circuit transmission line, including UPFC and wind farms with in-feed, double-circuit line with UPFC on one line and wind farm as one of the substations with wide variations in operating parameters. The test results obtained from simulation as well as in real-time digital simulator testing indicate that the DT-based intelligent differential relaying scheme is highly reliable and accurate with a response time of 2.25 cycles from the fault inception.

  13. Measuring Structural Parameters Through Stacking Galaxy Images

    NASA Astrophysics Data System (ADS)

    Li, Yubin; Zheng, Xian Zhong; Gu, Qiu-Sheng; Wang, Yi-Peng; Wen, Zhang Zheng; Guo, Kexin; An, Fang Xia

    2016-12-01

    It remains challenging to detect the low surface brightness structures of faint high-z galaxies, which are key to understanding the structural evolution of galaxies. The technique of image stacking allows us to measure the averaged light profile beneath the detection limit and probe the extended structure of a group of galaxies. We carry out simulations to examine the recovery of the averaged surface brightness profile through stacking model Hubble Space Telescope/Advanced Camera for Surveys images of a set of galaxies as functions of the Sérsic index (n), effective radius (R e) and axis ratio (AR). The Sérsic profile best fitting the radial profile of the stacked image is taken as the recovered profile, in comparison with the intrinsic mean profile of the model galaxies. Our results show that, in general, the structural parameters of the mean profile can be properly determined through stacking, though systematic biases need to be corrected when spreads of R e and AR are counted. We find that the Sérsic index is slightly overestimated and R e is underestimated at {AR}\\lt 0.5 because the stacked image appears to be more compact due to the presence of inclined galaxies; the spread of R e biases the stacked profile to have a higher Sérsic index. We stress that the measurements of structural parameters through stacking should take these biases into account. We estimate the biases in the recovered structural parameters from stacks of galaxies when the samples have distributions of {R}{{e}}, AR and n seen in local galaxies.

  14. Stacking fault energy in some single crystals

    NASA Astrophysics Data System (ADS)

    Vora, Aditya M.

    2012-06-01

    The stacking fault energy of single crystals has been reported using the peak shift method. Presently studied all single crystals are grown by using a direct vapor transport (DVT) technique in the laboratory. The structural characterizations of these crystals are made by XRD. Considerable variations are shown in deformation (α) and growth (β) probabilities in single crystals due to off-stoichiometry, which possesses the stacking fault in the single crystal.

  15. Infrared, vibrational circular dichroism, and Raman spectral simulations for β-sheet structures with various isotopic labels, interstrand, and stacking arrangements using density functional theory.

    PubMed

    Welch, William R W; Kubelka, Jan; Keiderling, Timothy A

    2013-09-12

    Infrared (IR), Raman, and vibrational circular dichroism (VCD) spectral variations for different β-sheet structures were studied using simulations based on density functional theory (DFT) force field and intensity computations. The DFT vibrational parameters were obtained for β-sheet fragments containing nine-amides and constrained to a variety of conformations and strand arrangements. These were subsequently transferred onto corresponding larger β-sheet models, normally consisting of five strands with ten amides each, for spectral simulations. Further extension to fibril models composed of multiple stacked β-sheets was achieved by combining the transfer of DFT parameters for each sheet with dipole coupling methods for interactions between sheets. IR spectra of the amide I show different splitting patterns for parallel and antiparallel β-sheets, and their VCD, in the absence of intersheet stacking, have distinct sign variations. Isotopic labeling by (13)C of selected residues yields spectral shifts and intensity changes uniquely sensitive to relative alignment of strands (registry) for antiparallel sheets. Stacking of multiple planar sheets maintains the qualitative spectral character of the single sheet but evidences some reduction in the exciton splitting of the amide I mode. Rotating sheets with respect to each other leads to a significant VCD enhancement, whose sign pattern and intensity is dependent on the handedness and degree of rotation. For twisted β-sheets, a significant VCD enhancement is computed even for sheets stacked with either the same or opposite alignments and the inter-sheet rotation, depending on the sense, can either further increase or weaken the enhanced VCD intensity. In twisted, stacked structures (without rotation), similar VCD amide I patterns (positive couplets) are predicted for both parallel and antiparallel sheets, but different IR intensity distributions still enable their differentiation. Our simulation results prove useful

  16. Inferring Cell Differentiation Processes Based on Phylogenetic Analysis of Genome-Wide Epigenetic Information: Hematopoiesis as a Model Case

    PubMed Central

    Koyanagi, Kanako O.

    2015-01-01

    How cells divide and differentiate is a fundamental question in organismal development; however, the discovery of differentiation processes in various cell types is laborious and sometimes impossible. Phylogenetic analysis is typically used to reconstruct evolutionary processes based on inherent characters. It could also be used to reconstruct developmental processes based on the developmental changes that occur during cell proliferation and differentiation. In this study, DNA methylation information from differentiated hematopoietic cells was used to perform phylogenetic analyses. The results were assessed for their validity in inferring hierarchical differentiation processes of hematopoietic cells and DNA methylation processes of differentiating progenitor cells. Overall, phylogenetic analyses based on DNA methylation information facilitated inferences regarding hematopoiesis. PMID:25638259

  17. Population based model of human embryonic stem cell (hESC) differentiation during endoderm induction.

    PubMed

    Task, Keith; Jaramillo, Maria; Banerjee, Ipsita

    2012-01-01

    The mechanisms by which human embryonic stem cells (hESC) differentiate to endodermal lineage have not been extensively studied. Mathematical models can aid in the identification of mechanistic information. In this work we use a population-based modeling approach to understand the mechanism of endoderm induction in hESC, performed experimentally with exposure to Activin A and Activin A supplemented with growth factors (basic fibroblast growth factor (FGF2) and bone morphogenetic protein 4 (BMP4)). The differentiating cell population is analyzed daily for cellular growth, cell death, and expression of the endoderm proteins Sox17 and CXCR4. The stochastic model starts with a population of undifferentiated cells, wherefrom it evolves in time by assigning each cell a propensity to proliferate, die and differentiate using certain user defined rules. Twelve alternate mechanisms which might describe the observed dynamics were simulated, and an ensemble parameter estimation was performed on each mechanism. A comparison of the quality of agreement of experimental data with simulations for several competing mechanisms led to the identification of one which adequately describes the observed dynamics under both induction conditions. The results indicate that hESC commitment to endoderm occurs through an intermediate mesendoderm germ layer which further differentiates into mesoderm and endoderm, and that during induction proliferation of the endoderm germ layer is promoted. Furthermore, our model suggests that CXCR4 is expressed in mesendoderm and endoderm, but is not expressed in mesoderm. Comparison between the two induction conditions indicates that supplementing FGF2 and BMP4 to Activin A enhances the kinetics of differentiation than Activin A alone. This mechanistic information can aid in the derivation of functional, mature cells from their progenitors. While applied to initial endoderm commitment of hESC, the model is general enough to be applicable either to a system of

  18. Advances in Diode-Laser-Based Water Vapor Differential Absorption Lidar

    NASA Astrophysics Data System (ADS)

    Spuler, Scott; Repasky, Kevin; Morley, Bruce; Moen, Drew; Weckwerth, Tammy; Hayman, Matt; Nehrir, Amin

    2016-06-01

    An advanced diode-laser-based water vapor differential absorption lidar (WV-DIAL) has been developed. The next generation design was built on the success of previous diode-laser-based prototypes and enables accurate measurement of water vapor closer to the ground surface, in rapidly changing atmospheric conditions, and in daytime cloudy conditions up to cloud base. The lidar provides up to 1 min resolution, 150 m range resolved measurements of water vapor in a broad range of atmospheric conditions. A description of the instrument and results from its initial field test in 2014 are discussed.

  19. Satellite power using a magnetically suspended flywheel stack

    NASA Technical Reports Server (NTRS)

    Kirk, James A.; Anand, Davinder K.

    1988-01-01

    Research activities with magnetically suspended flywheels are reported. The purpose of the effort is to critically examine and further the development of all the key technologies which impact the inertial energy storage system. The results presented discuss the concept of a magnetically suspended flywheel as it applies to a 500 Watt-hour energy storage system. The proposed system is currently under hardware development and is based upon two pancake magnetic bearings arranged in a vertical stack.

  20. Solving Differential Matrix Riccati Equations by a piecewise-linearized method based on the conmutant equation

    NASA Astrophysics Data System (ADS)

    Ibáñez, Javier; Hernández, Vicente

    2009-11-01

    Differential Matrix Riccati Equations play a fundamental role in control theory, for example, in optimal control, filtering and estimation, decoupling and order reduction, etc. In this paper a piecewise-linearized method based on the conmutant equation to solve Differential Matrix Riccati Equations (DMREs) is described. This method is applied to develop two algorithms which solve these equations: one for time-varying DMREs and another for time-invariant DMREs, also MATLAB implementations of the above algorithms are developed. Since MATLAB does not have functions which solve DMREs, two algorithms based on a BDF method are also developed. All implemented algorithms have been compared, under equal conditions, at both precision and computational costs. Experimental results show the advantages of solving non-stiff DMREs and in particular stiff DMREs by the proposed algorithms.

  1. Ultrafast all-optical temporal differentiators based on CMOS-compatible integrated-waveguide Bragg gratings.

    PubMed

    Rutkowska, K A; Duchesne, D; Strain, M J; Morandotti, R; Sorel, M; Azaña, J

    2011-09-26

    We report the first realization of integrated, all-optical first- and higher-order photonic differentiators operating at terahertz (THz) processing speeds. This is accomplished in a Silicon-on-Insulator (SOI) CMOS-compatible platform using a simple integrated geometry based on (π-)phase-shifted Bragg gratings. Moreover, we achieve on-chip generation of sub-picosecond Hermite-Gaussian pulse waveforms, which are noteworthy for applications in next-generation optical telecommunications.

  2. Chaotic attractors based on unstable dissipative systems via third-order differential equation

    NASA Astrophysics Data System (ADS)

    Campos-Cantón, E.

    2016-07-01

    In this paper, we present an approach how to yield 1D, 2D and 3D-grid multi-scroll chaotic systems in R3 based on unstable dissipative systems via third-order differential equation. This class of systems is constructed by a switching control law(SCL) changing the equilibrium point of an unstable dissipative system. The switching control law that governs the position of the equilibrium point varies according to the number of scrolls displayed in the attractor.

  3. Machine learning-based differential network analysis: a study of stress-responsive transcriptomes in Arabidopsis.

    PubMed

    Ma, Chuang; Xin, Mingming; Feldmann, Kenneth A; Wang, Xiangfeng

    2014-02-01

    Machine learning (ML) is an intelligent data mining technique that builds a prediction model based on the learning of prior knowledge to recognize patterns in large-scale data sets. We present an ML-based methodology for transcriptome analysis via comparison of gene coexpression networks, implemented as an R package called machine learning-based differential network analysis (mlDNA) and apply this method to reanalyze a set of abiotic stress expression data in Arabidopsis thaliana. The mlDNA first used a ML-based filtering process to remove nonexpressed, constitutively expressed, or non-stress-responsive "noninformative" genes prior to network construction, through learning the patterns of 32 expression characteristics of known stress-related genes. The retained "informative" genes were subsequently analyzed by ML-based network comparison to predict candidate stress-related genes showing expression and network differences between control and stress networks, based on 33 network topological characteristics. Comparative evaluation of the network-centric and gene-centric analytic methods showed that mlDNA substantially outperformed traditional statistical testing-based differential expression analysis at identifying stress-related genes, with markedly improved prediction accuracy. To experimentally validate the mlDNA predictions, we selected 89 candidates out of the 1784 predicted salt stress-related genes with available SALK T-DNA mutagenesis lines for phenotypic screening and identified two previously unreported genes, mutants of which showed salt-sensitive phenotypes.

  4. A polymer electrolyte fuel cell stack for stationary power generation from hydrogen fuel

    SciTech Connect

    Wilson, M.S.; Moeller-Holst, S.; Webb, D.M.; Zawodzinski, C.; Gottesfeld, S.

    1998-08-01

    The objective is to develop and demonstrate a 4 kW, hydrogen-fueled polymer electrolyte fuel cell (PEFC) stack, based on non-machined stainless steel hardware and on membrane/electrode assemblies (MEAs) of low catalyst loadings. The stack is designed to operate at ambient pressure on the air-side and can accommodate operation at higher fuel pressures, if so required. This is to be accomplished by working jointly with a fuel cell stack manufacturer, based on a CRADA. The performance goals are 57% energy conversion efficiency hydrogen-to-electricity (DC) at a power density of 0.9 kW/liter for a stack operating at ambient inlet pressures. The cost goal is $600/kW, based on present materials costs.

  5. Progress on the NSTX Center Stack Upgrade

    SciTech Connect

    L. Dudek, J. Chrzanowski, P. Heitzenroeder, D. Mangra, C. Neumeyer, M. Smith, R. Strykowsky, P. Titus, T. Willard

    2010-09-22

    The National Spherical Torus Experiment (NSTX) will be upgraded to provide increased toroidal field, plasma current and pulse length. This involves the replacement of the so-called center stack, including the inner legs of the Toroidal Field (TF) coil, the Ohmic Heating (OH) coil, and the inner Poloidal Field (PF) coils. In addition the increased performance of the upgrade requires qualification of remaining existing components for higher loads. Initial conceptual design efforts were based on worst-case combinations of possible currents that the power supplies could deliver. This proved to be an onerous requirement and caused many of the outer coils support structures to require costly heavy reinforcement. This has led to the planned implementation of a Digital Coil Protection System (DCPS) to reduce design-basis loads to levels that are more realistic and manageable. As a minimum, all components must be qualified for the increase in normal operating loads with headroom. Design features and analysis efforts needed to meet the upgrade loading are discussed. Mission and features of the DCPS are presented.

  6. A cross-stacked plasmonic nanowire network for high-contrast femtosecond optical switching

    NASA Astrophysics Data System (ADS)

    Lin, Yuanhai; Zhang, Xinping; Fang, Xiaohui; Liang, Shuyan

    2016-01-01

    We report an ultrafast optical switching device constructed by stacking two layers of gold nanowires into a perpendicularly crossed network, which works at a speed faster than 280 fs with an on/off modulation depth of about 22.4%. The two stacks play different roles in enhancing consistently the optical switching performance due to their different dependence on the polarization of optical electric fields. The cross-plasmon resonance based on the interaction between the perpendicularly stacked gold nanowires and its Fano-coupling with Rayleigh anomaly is the dominant mechanism for such a high-contrast optical switching device.

  7. Plants with stacked genetically modified events: to assess or not to assess?

    PubMed

    Kok, Esther J; Pedersen, Jan; Onori, Roberta; Sowa, Slawomir; Schauzu, Marianna; De Schrijver, Adinda; Teeri, Teemu H

    2014-02-01

    The principles for the safety assessment of genetically modified (GM) organisms (GMOs) are harmonised worldwide to a large extent. There are, however, still differences between the European GMO regulations and the GMO regulations as they have been formulated in other parts of the world. One of these differences relates to the so-called 'stacked GM events', that is, GMOs, plants so far, where new traits are combined by conventional crossing of different GM plants. This paper advocates rethinking the current food/feed safety assessment of stacked GM events in Europe based on an analysis of different aspects that currently form the rationale for the safety assessment of stacked GM events.

  8. Spectroscopic signatures of AA' and AB stacking of chemical vapor deposited bilayer MoS2

    DOE PAGES

    Xia, Ming; Li, Bo; Yin, Kuibo; ...

    2015-11-04

    We discuss prominent resonance Raman and photoluminescence spectroscopic differences between AA'and AB stacked bilayer molybdenum disulfide (MoS2) grown by chemical vapor deposition are reported. Bilayer MoS2 islands consisting of the two stacking orders were obtained under identical growth conditions. Also, resonance Raman and photoluminescence spectra of AA' and AB stacked bilayer MoS2 were obtained on Au nanopyramid surfaces under strong plasmon resonance. Both resonance Raman and photoluminescence spectra show distinct features indicating clear differences in interlayer interaction between these two phases. The implication of these findings on device applications based on spin and valley degrees of freedom.

  9. High duty-cycle, high-efficiency QCW stacks for medical applications

    NASA Astrophysics Data System (ADS)

    Kindsvater, A.; Schröder, M.; Werner, E.; Seidel, S.; Wölz, M.; Loyo-Maldonado, V.

    2016-03-01

    Laser stacks emitting short light pulses are ideally suited for medical and cosmetic applications. Developing enhanced, stable and reliable assembly processes, Jenoptik is reaching for higher energy densities and lower manufacturing costs. In this paper an improved technology for actively cooled QCW stacks is presented. Based on simulations and experimental data, the impacts on the laser stack performance are described and shown as power-current and thermal impedance plots. We show that the bar-to-bar pitch can be reduced from 1.7 mm to 1.2 mm without detrimental thermal effects for pulse durations up to 100 ms.

  10. Interior tomography from differential phase contrast data via Hilbert transform based on spline functions

    NASA Astrophysics Data System (ADS)

    Yang, Qingsong; Cong, Wenxiang; Wang, Ge

    2016-10-01

    X-ray phase contrast imaging is an important mode due to its sensitivity to subtle features of soft biological tissues. Grating-based differential phase contrast (DPC) imaging is one of the most promising phase imaging techniques because it works with a normal x-ray tube of a large focal spot at a high flux rate. However, a main obstacle before this paradigm shift is the fabrication of large-area gratings of a small period and a high aspect ratio. Imaging large objects with a size-limited grating results in data truncation which is a new type of the interior problem. While the interior problem was solved for conventional x-ray CT through analytic extension, compressed sensing and iterative reconstruction, the difficulty for interior reconstruction from DPC data lies in that the implementation of the system matrix requires the differential operation on the detector array, which is often inaccurate and unstable in the case of noisy data. Here, we propose an iterative method based on spline functions. The differential data are first back-projected to the image space. Then, a system matrix is calculated whose components are the Hilbert transforms of the spline bases. The system matrix takes the whole image as an input and outputs the back-projected interior data. Prior information normally assumed for compressed sensing is enforced to iteratively solve this inverse problem. Our results demonstrate that the proposed algorithm can successfully reconstruct an interior region of interest (ROI) from the differential phase data through the ROI.

  11. Classifier Subset Selection for the Stacked Generalization Method Applied to Emotion Recognition in Speech

    PubMed Central

    Álvarez, Aitor; Sierra, Basilio; Arruti, Andoni; López-Gil, Juan-Miguel; Garay-Vitoria, Nestor

    2015-01-01

    In this paper, a new supervised classification paradigm, called classifier subset selection for stacked generalization (CSS stacking), is presented to deal with speech emotion recognition. The new approach consists of an improvement of a bi-level multi-classifier system known as stacking generalization by means of an integration of an estimation of distribution algorithm (EDA) in the first layer to select the optimal subset from the standard base classifiers. The good performance of the proposed new paradigm was demonstrated over different configurations and datasets. First, several CSS stacking classifiers were constructed on the RekEmozio dataset, using some specific standard base classifiers and a total of 123 spectral, quality and prosodic features computed using in-house feature extraction algorithms. These initial CSS stacking classifiers were compared to other multi-classifier systems and the employed standard classifiers built on the same set of speech features. Then, new CSS stacking classifiers were built on RekEmozio using a different set of both acoustic parameters (extended version of the Geneva Minimalistic Acoustic Parameter Set (eGeMAPS)) and standard classifiers and employing the best meta-classifier of the initial experiments. The performance of these two CSS stacking classifiers was evaluated and compared. Finally, the new paradigm was tested on the well-known Berlin Emotional Speech database. We compared the performance of single, standard stacking and CSS stacking systems using the same parametrization of the second phase. All of the classifications were performed at the categorical level, including the six primary emotions plus the neutral one. PMID:26712757

  12. DNA sequencing by hybridization to microchip octa-and decanucleotides extended by stacked pentanucleotides.

    PubMed Central

    Parinov, S; Barsky, V; Yershov, G; Kirillov, E; Timofeev, E; Belgovskiy, A; Mirzabekov, A

    1996-01-01

    The efficiency of sequencing by hybridization to an oligonucleotide microchip grows with an increase in the number and in the length of the oligonucleotides; however, such increases raise enormously the complexity of the microchip and decrease the accuracy of hybridization. We have been developing the technique of contiguous stacking hybridization (CSH) to circumvent these shortcomings. Stacking interactions between adjacent bases of two oligonucleotides stabilize their contiguous duplex with DNA. The use of such stacking increases the effective length of microchip oligonucleotides, enhances sequencing accuracy and allows the sequencing of longer DNA. The effects of mismatches, base composition, length and other factors on the stacking are evaluated. Contiguous stacking hybridization of DNA with immobilized 8mers and one or two 5mers labeled with two different fluorescent dyes increases the effective length of sequencing oligonucleotides from 8 to 13 and 18 bases, respectively. The incorporation of all four bases or 5-nitroindole as a universal base into different positions of the 5mers permitted a decrease in the number of additional rounds of hybridization. Contiguous stacking hybridization appears to be a promising approach to significantly increasing the efficiency of sequencing by hybridization. PMID:8760885

  13. Solid oxide fuel cell stacks using extruded honeycomb type elements

    NASA Astrophysics Data System (ADS)

    Wetzko, M.; Belzner, A.; Rohr, F. J.; Harbach, F.

    A solid oxide fuel cell (SOFC) stack concept is described which comprises "condensed-tubes" like extruded honeycomb sections of ceramic electrolyte (ZrO 2-based) and interconnectors of nickel sheet as key elements. According to this concept, well known and extensively tested construction principles can be realised in a low-cost production. The cells are self-supported with in-plane conduction. A demonstrator model stack of five honeycomb elements and six nickel sheet seals/interconnectors was built and operated for 860 h at 1000°C. Volumetric power densities of 160 kW/m 3 were obtained with H 2 vs. air, of close to 200 kW/m 3 with H 2 vs. O 2.

  14. High specific power, direct methanol fuel cell stack

    DOEpatents

    Ramsey, John C.; Wilson, Mahlon S.

    2007-05-08

    The present invention is a fuel cell stack including at least one direct methanol fuel cell. A cathode manifold is used to convey ambient air to each fuel cell, and an anode manifold is used to convey liquid methanol fuel to each fuel cell. Tie-bolt penetrations and tie-bolts are spaced evenly around the perimeter to hold the fuel cell stack together. Each fuel cell uses two graphite-based plates. One plate includes a cathode active area that is defined by serpentine channels connecting the inlet manifold with an integral flow restrictor to the outlet manifold. The other plate includes an anode active area defined by serpentine channels connecting the inlet and outlet of the anode manifold. Located between the two plates is the fuel cell active region.

  15. Overview of anisotropic filtering methods based on partial differential equations for electronic speckle pattern interferometry.

    PubMed

    Tang, Chen; Wang, Linlin; Yan, Haiqing

    2012-07-10

    In this paper, we first present the general description for partial differential equations (PDEs) based image processing methods, including the basic idea, the main advantages and disadvantages, a few representative PDE models, and the derivation of PDE models. Then we review our contributions on PDE-based anisotropic filtering methods for electronic speckle pattern interferometry, including the second-order, fourth-order, and coupled nonoriented PDE filtering models and the second-order and coupled nonlinear oriented PDE filtering models. We have summarized the features of each model.

  16. Generalization of the H-κ stacking method to anisotropic media

    NASA Astrophysics Data System (ADS)

    Kaviani, Ayoub; Rümpker, Georg

    2015-07-01

    We investigate the effect of anisotropy on estimates of crustal thickness H and average bulk VP/VS-ratio κ. Here we extend the stacking approach of Zhu and Kanamori (2000) to include all 20 P-to-S converted waves and their crustal reverberations that are generated in the anisotropic case—instead of only five phases in the isotropic case. The ray-based algorithm of Frederiksen and Bostock (2000) is used to calculate the amplitude and arrival time of each phase. Synthetic tests are performed to investigate the feasibility and robustness of the stacking approach. For simplicity, we assume hexagonal symmetry and a horizontal symmetry axis, but more general anisotropy may be considered. The tests reveal that the estimates of H and κ can be significantly affected by the presence of crustal anisotropy. We verify the feasibility of the stacking approach for real data by applying the method to examples from three different tectonic regions. The results show that the anisotropic stacking scheme presented here can provide a much better constraint on the estimation of H and κ than is achieved using isotropic stacking. Anisotropic stacking can also help resolve the ambiguity in determination of H and κ that arises when several maxima from stacking amplitudes of receiver functions occur in the case of complex crustal structure.

  17. RECENT ADVANCES IN HIGH TEMPERATURE ELECTROLYSIS AT IDAHO NATIONAL LABORATORY: STACK TESTS

    SciTech Connect

    X, Zhang; J. E. O'Brien; R. C. O'Brien; J. J. Hartvigsen; G. Tao; N. Petigny

    2012-07-01

    High temperature steam electrolysis is a promising technology for efficient sustainable large-scale hydrogen production. Solid oxide electrolysis cells (SOECs) are able to utilize high temperature heat and electric power from advanced high-temperature nuclear reactors or renewable sources to generate carbon-free hydrogen at large scale. However, long term durability of SOECs needs to be improved significantly before commercialization of this technology. A degradation rate of 1%/khr or lower is proposed as a threshold value for commercialization of this technology. Solid oxide electrolysis stack tests have been conducted at Idaho National Laboratory to demonstrate recent improvements in long-term durability of SOECs. Electrolytesupported and electrode-supported SOEC stacks were provided by Ceramatec Inc., Materials and Systems Research Inc. (MSRI), and Saint Gobain Advanced Materials (St. Gobain), respectively for these tests. Long-term durability tests were generally operated for a duration of 1000 hours or more. Stack tests based on technology developed at Ceramatec and MSRI have shown significant improvement in durability in the electrolysis mode. Long-term degradation rates of 3.2%/khr and 4.6%/khr were observed for MSRI and Ceramatec stacks, respectively. One recent Ceramatec stack even showed negative degradation (performance improvement) over 1900 hours of operation. A three-cell short stack provided by St. Gobain, however, showed rapid degradation in the electrolysis mode. Improvements on electrode materials, interconnect coatings, and electrolyteelectrode interface microstructures contribute to better durability of SOEC stacks.

  18. Test Plan for Long-Term Operation of a Ten-Cell High Temperature Electrolysis Stack

    SciTech Connect

    James E. O'Brien; Carl M. Stoots; J. Stephen Herring

    2008-07-01

    This document defines a test plan for a long-term (2500 Hour) test of a ten-cell high-temperature electrolysis stack to be performed at INL during FY09 under the Nuclear Hydrogen Initiative. This test was originally planned for FY08, but was removed from our work scope as a result of the severe budget cuts in the FY08 NHI Program. The purpose of this test is to evaluate stack performance degradation over a relatively long time period and to attempt to identify some of the degradation mechanisms via post-test examination. This test will be performed using a planar ten-cell Ceramatec stack, with each cell having dimensions of 10 cm × 10 cm. The specific makeup of the stack will be based on the results of a series of shorter duration ten-cell stack tests being performed during FY08, funded by NGNP. This series of tests was aimed at evaluating stack performance with different interconnect materials and coatings and with or without brazed edge rails. The best performing stack from the FY08 series, in which five different interconnect/coating/edge rail combinations were tested, will be selected for the FY09 long-term test described herein.

  19. iTRAQ-based differential proteomic analysis in Mongolian gerbil brains chronically infected with Toxoplasma gondii.

    PubMed

    Lv, Lin; Wang, Yapei; Feng, Weili; Hernandez, Jorge A; Huang, Wanyi; Zheng, Yuxiang; Zhou, Xue; Lv, Shumei; Chen, Yajun; Yuan, Zi-Guo

    2017-03-17

    The aim of our study was to detect differentially regulated proteins and specific signaling pathways in Mongolian gerbil brains during chronic Toxoplasma gondii (T.gondii) PRU strain infection. We use a iTRAQ-based strategy to detecte 4935 proteins, out of which 110 proteins were differentially expressed (>/=2.0-fold, p value <0.05) when the brain of gerbils infected with T.gondii was compared to control brain tissues. We confirmed the authenticity and the accuracy of iTRAQ results through quantitative real-time PCR and western blot (WB), which was consistent with mass spectrometry analysis. Pathway analysis and GO (Gene Ontology) annotations indicated the deregulation of several pathways related to immune response, metabolism and neurological processes, like neuronal growth and neurotransmitter transport. Through the iTRAQ-based strategy, we obtained a comparative proteome profile of brain tissues from Mongolian gerbils with chronic infection of T.gondii. Several differentially expressed proteins involved in neurological pathways, like Parvalbumin, Drebrin or Synaptotagmin, can be further investigated to enhance our understanding of central nervous system (CNS) injury caused by T.gondii.

  20. Enhanced dynamical stability with harmonic slip stacking

    NASA Astrophysics Data System (ADS)

    Eldred, Jeffrey; Zwaska, Robert

    2016-10-01

    We develop a configuration of radio-frequency (rf) cavities to dramatically improve the performance of slip stacking. Slip stacking is an accumulation technique used at Fermilab to nearly double proton intensity by maintaining two beams of different momenta in the same storage ring. The two particle beams are longitudinally focused in the Recycler by two 53 MHz 100 kV rf cavities with a small frequency difference between them. We propose an additional 106 MHz 20 kV rf cavity with a frequency at the double the average of the upper and lower main rf frequencies. We show the harmonic rf cavity cancels out the resonances generated between the two main rf cavities and we derive the relationship between the harmonic rf voltage and the main rf voltage. We find the area factors that can be used to calculate the available phase space area for any set of beam parameters without individual simulation. We establish Booster beam quality requirements to achieve 99% slip stacking efficiency. We measure the longitudinal distribution of the Booster beam and use it to generate a realistic beam model for slip stacking simulation. We demonstrate that the harmonic rf cavity can not only reduce particle loss during slip stacking, but also reduce the final longitudinal emittance.

  1. Technical description of Stack 296-B-5

    SciTech Connect

    Ridge, T.M.

    1994-11-15

    Of particular concern to facilities on the Hanford site is Title 40, Code of Federal Regulations, Chapter 40, Part 61, Subpart H, ``National emission Standards for Emissions of Radionuclides Other Than Radon From Department of Energy Facilities.`` Assessments of facility stacks and potential radionuclide emissions determined whether these stacks would be subject to the sampling and monitoring requirements of 40 CFR 61, Subpart H. Stack 296-B-5 exhausts 221-BB building which houses tanks containing B Plant steam condensate and B Plant process condensate from the operation of the low-level waste concentrator. The assessment of potential radionuclide emissions from the 296-B-5 stack resulted in an effective dose equivalent to the maximally exposed individual of less than 0.1 millirem per year. Therefore, the stack is not subject to the sampling and monitoring requirements of 40 CFR 61, Subpart H. However, the sampling and monitoring system must be in compliance with the Environmental Compliance Manual, WHC-CM-7-5. Currently, 296-B-5 is sampled continuously with a record sampler and continuous air monitor (CAM).

  2. Fungal melanins differ in planar stacking distances.

    PubMed

    Casadevall, Arturo; Nakouzi, Antonio; Crippa, Pier R; Eisner, Melvin

    2012-01-01

    Melanins are notoriously difficult to study because they are amorphous, insoluble and often associated with other biological materials. Consequently, there is a dearth of structural techniques to study this enigmatic pigment. Current models of melanin structure envision the stacking of planar structures. X ray diffraction has historically been used to deduce stacking parameters. In this study we used X ray diffraction to analyze melanins derived from Cryptococcus neoformans, Aspergillus niger, Wangiella dermatitides and Coprinus comatus. Analysis of melanin in melanized C. neoformans encapsulated cells was precluded by the fortuitous finding that the capsular polysaccharide had a diffraction spectrum that was similar to that of isolated melanin. The capsular polysaccharide spectrum was dominated by a broad non-Bragg feature consistent with origin from a repeating structural motif that may arise from inter-molecular interactions and/or possibly gel organization. Hence, we isolated melanin from each fungal species and compared diffraction parameters. The results show that the inferred stacking distances of fungal melanins differ from that reported for synthetic melanin and neuromelanin, occupying intermediate position between these other melanins. These results suggest that all melanins have a fundamental diffracting unit composed of planar graphitic assemblies that can differ in stacking distance. The stacking peak appears to be a distinguishing universal feature of melanins that may be of use in characterizing these enigmatic pigments.

  3. Contemporary sample stacking in analytical electrophoresis.

    PubMed

    Malá, Zdena; Šlampová, Andrea; Křivánková, Ludmila; Gebauer, Petr; Boček, Petr

    2015-01-01

    This contribution is a methodological review of the publications about the topic from the last 2 years. Therefore, it is primarily organized according to the methods and procedures used in surveyed papers and the origin and type of sample and specification of analytes form the secondary structure. The introductory part about navigation in the architecture of stacking brings a brief characterization of the various stacking methods, with the description of mutual links to each other and important differences among them. The main body of the article brings a survey of publications organized according to main principles of stacking and then according to the origin and type of the sample. Provided that the paper cited gave explicitly the relevant data, information about the BGE(s) used, procedure, detector employed, and reached LOD and/or concentration effect is given. The papers where the procedure used is a combination of diverse fragments and parts of various stacking techniques are mentioned in a special section on combined techniques. The concluding remarks in the final part of the review evaluate present state of art and the trends of sample stacking in CE.

  4. Surface and Interface Chemistry for Gate Stacks on Silicon

    NASA Astrophysics Data System (ADS)

    Frank, M. M.; Chabal, Y. J.

    This chapter addresses the fundamental silicon surface science associated with the continued progress of nanoelectronics along the path prescribed by Moore's law. Focus is on hydrogen passivation layers and on ultrathin oxide films encountered during silicon cleaning and gate stack formation in the fabrication of metal-oxide-semiconductor field-effect transistors (MOSFETs). Three main topics are addressed. (i) First, the current practices and understanding of silicon cleaning in aqueous solutions are reviewed, including oxidizing chemistries and cleans leading to a hydrogen passivation layer. The dependence of the final surface termination and morphology/roughness on reactant choice and pH and the influence of impurities such as dissolved oxygen or metal ions are discussed. (ii) Next, the stability of hydrogen-terminated silicon in oxidizing liquid and gas phase environments is considered. In particular, the remarkable stability of hydrogen-terminated silicon surface in pure water vapor is discussed in the context of atomic layer deposition (ALD) of high-permittivity (high-k) gate dielectrics where water is often used as an oxygen precursor. Evidence is also provided for co-operative action between oxygen and water vapor that accelerates surface oxidation in humid air. (iii) Finally, the fabrication of hafnium-, zirconium- and aluminum-based high-k gate stacks is described, focusing on the continued importance of the silicon/silicon oxide interface. This includes a review of silicon surface preparation by wet or gas phase processing and its impact on high-k nucleation during ALD growth, and the consideration of gate stack capacitance and carrier mobility. In conclusion, two issues are highlighted: the impact of oxygen vacancies on the electrical characteristics of high-k MOS devices, and the way alloyed metal ions (such as Al in Hf-based gate stacks) in contact with the interfacial silicon oxide layer can be used to control flatband and threshold voltages.

  5. Inflatable containment diaphragm for sealing and removing stacks

    DOEpatents

    Meskanick, G.R.; Rosso, D.T.

    1993-04-13

    A diaphragm with an inflatable torus-shaped perimeter is used to seal at least one end of a stack so that debris that might be hazardous will not be released during removal of the stack. A diaphragm is inserted and inflated in the lower portion of a stack just above where the stack is to be cut such that the perimeter of the diaphragm expands and forms a seal against the interior surface of the stack.

  6. Living biointerfaces based on non-pathogenic bacteria to direct cell differentiation

    NASA Astrophysics Data System (ADS)

    Rodrigo-Navarro, Aleixandre; Rico, Patricia; Saadeddin, Anas; Garcia, Andres J.; Salmeron-Sanchez, Manuel

    2014-07-01

    Genetically modified Lactococcus lactis, non-pathogenic bacteria expressing the FNIII7-10 fibronectin fragment as a protein membrane have been used to create a living biointerface between synthetic materials and mammalian cells. This FNIII7-10 fragment comprises the RGD and PHSRN sequences of fibronectin to bind α5β1 integrins and triggers signalling for cell adhesion, spreading and differentiation. We used L. lactis strain to colonize material surfaces and produce stable biofilms presenting the FNIII7-10 fragment readily available to cells. Biofilm density is easily tunable and remains stable for several days. Murine C2C12 myoblasts seeded over mature biofilms undergo bipolar alignment and form differentiated myotubes, a process triggered by the FNIII7-10 fragment. This biointerface based on living bacteria can be further modified to express any desired biochemical signal, establishing a new paradigm in biomaterial surface functionalisation for biomedical applications.

  7. Molecular-based approach to the differentiation of mealybug (Hemiptera: Pseudococcidae) species.

    PubMed

    Beuning, L L; Murphy, P; Wu, E; Batchelor, T A; Morris, B A

    1999-04-01

    The rDNA internal transcribed spacer (ITS) region of 4 mealybug species, Pseudococcus viburni (Signoret), P. longispinus (Targiono-Tozzetti), P. calceolariae (Maskell), and P. similans (Lidgett), was isolated by polymerase chain reaction (PCR) amplification, cloned, and sequenced. In this region of the genome there were numerous differences, including nucleotide substitutions, insertions, or deletions between P. viburni, P. longispinus, and P. calceolariae, whereas P. calceolariae and P. similans were very similar. Based on sequence differences between the ITS regions, we designed PCR primers that were able to differentiate the 4 mealybug species and that correlated with morphological differences found between adult females of these species. The PCR amplification by using the species-specific primers enabled the differentiation of not only adult females but also eggs, juveniles, and adult males, which was not previously possible by using conventional identification methods.

  8. A robust random number generator based on differential comparison of chaotic laser signals.

    PubMed

    Zhang, Jianzhong; Wang, Yuncai; Liu, Ming; Xue, Lugang; Li, Pu; Wang, Anbang; Zhang, Mingjiang

    2012-03-26

    We experimentally realize a robust real-time random number generator by differentially comparing the signal from a chaotic semiconductor laser and its delayed signal through a 1-bit analog-to-digital converter. The probability density distribution of the output chaotic signal based on the differential comparison method possesses an extremely small coefficient of Pearson's median skewness (1.5 × 10⁻⁶), which can yield a balanced random sequence much easily than the previously reported method that compares the signal from the chaotic laser with a certain threshold value. Moveover, we experimently demonstrate that our method can stably generate good random numbers at rates of 1.44 Gbit/s with excellent immunity from external perturbations while the previously reported method fails.

  9. Living biointerfaces based on non-pathogenic bacteria to direct cell differentiation

    PubMed Central

    Rodrigo-Navarro, Aleixandre; Rico, Patricia; Saadeddin, Anas; Garcia, Andres J.; Salmeron-Sanchez, Manuel

    2014-01-01

    Genetically modified Lactococcus lactis, non-pathogenic bacteria expressing the FNIII7-10 fibronectin fragment as a protein membrane have been used to create a living biointerface between synthetic materials and mammalian cells. This FNIII7-10 fragment comprises the RGD and PHSRN sequences of fibronectin to bind α5β1 integrins and triggers signalling for cell adhesion, spreading and differentiation. We used L. lactis strain to colonize material surfaces and produce stable biofilms presenting the FNIII7-10 fragment readily available to cells. Biofilm density is easily tunable and remains stable for several days. Murine C2C12 myoblasts seeded over mature biofilms undergo bipolar alignment and form differentiated myotubes, a process triggered by the FNIII7-10 fragment. This biointerface based on living bacteria can be further modified to express any desired biochemical signal, establishing a new paradigm in biomaterial surface functionalisation for biomedical applications. PMID:25068919

  10. Partial differential equation-based localization of a monopole source from a circular array.

    PubMed

    Ando, Shigeru; Nara, Takaaki; Levy, Tsukassa

    2013-10-01

    Wave source localization from a sensor array has long been the most active research topics in both theory and application. In this paper, an explicit and time-domain inversion method for the direction and distance of a monopole source from a circular array is proposed. The approach is based on a mathematical technique, the weighted integral method, for signal/source parameter estimation. It begins with an exact form of the source-constraint partial differential equation that describes the unilateral propagation of wide-band waves from a single source, and leads to exact algebraic equations that include circular Fourier coefficients (phase mode measurements) as their coefficients. From them, nearly closed-form, single-shot and multishot algorithms are obtained that is suitable for use with band-pass/differential filter banks. Numerical evaluation and several experimental results obtained using a 16-element circular microphone array are presented to verify the validity of the proposed method.

  11. NF1 loss induces senescence during human melanocyte differentiation in an iPSC-based model.

    PubMed

    Larribere, Lionel; Wu, Huizi; Novak, Daniel; Galach, Marta; Bernhardt, Mathias; Orouji, Elias; Weina, Kasia; Knappe, Nathalie; Sachpekidis, Christos; Umansky, Ludmila; Beckhove, Philipp; Umansky, Viktor; De Schepper, Sofie; Kaufmann, Dieter; Ballotti, Robert; Bertolotto, Corine; Utikal, Jochen

    2015-07-01

    Neurofibromatosis type 1 (NF1) is a frequent genetic disease leading to the development of Schwann cell-derived neurofibromas or melanocytic lesions called café-au-lait macules (CALMs). The molecular mechanisms involved in CALMs formation remain largely unknown. In this report, we show for the first time pathophysiological mechanisms of abnormal melanocyte differentiation in a human NF1(+/-) -induced pluripotent stem cell (iPSC)-based model. We demonstrate that NF1 patient-derived fibroblasts can be successfully reprogrammed in NF1(+/-) iPSCs with active RAS signaling and that NF1 loss induces senescence during melanocyte differentiation as well as in patient's-derived CALMs, revealing a new role for NF1 in the melanocyte lineage.

  12. [A new retrieval method for ozone concentration at the troposphere based on differential absorption lidar].

    PubMed

    Fan, Guang-Qiang; Liu, Jian-Guo; Liu, Wen-Qing; Lu, Yi-Huai; Zhang, Tian-Shu; Dong, Yun-Sheng; Zhao, Xue-Song

    2012-12-01

    Aerosols interfere with differential absorption lidar ozone concentration measurement and can introduce significant errors. A new retrieval method was introduced, and ozone concentration and aerosol extinction coefficient were gained simultaneously based on the retrieval method. The variables were analyzed by experiment including aerosol lidar ratio, aerosol wavelength exponent, and aerosol-molecular ratio at the reference point. The results show that these parameters introduce error less than 8% below 1 km. The measurement error derives chiefly from signal noise and the parameters introduce error less than 3% above 1 km. Finally the vertical profile of tropospheric ozone concentration and aerosol extinction coefficient were derived by using this algorithm. The retrieval results of the algorithm and traditional dual-wavelength difference algorithm are compared and analyzed. Experimental results indicate that the algorithm is feasible, and the algorithm can reduce differential absorption lidar measurement error introduced by aerosol.

  13. An evaluation of parallel optimization for OpenSolaris Network Stack

    SciTech Connect

    Zou, Hongbo; Wu, Wenji; Sun, Xian-He; DeMar, Phil; Crawford, Matt; /Fermilab

    2010-10-01

    Computing is now shifting towards multiprocessing. The fundamental goal of multiprocessing is improved performance through the introduction of additional hardware threads or cores (referred to as 'cores' for simplicity). Modern network stacks can exploit parallel cores to allow either message-based parallelism or connection-based parallelism as a means to enhance performance. OpenSolaris has redesigned and parallelized to better utilize additional cores. Three special technologies, named Softring Set, Soft ring and Squeue are introduced in OpenSolaris for stack parallelization. In this paper, we study the OpenSolaris packet receiving process and its core parallelism optimization techniques. Experiment results show that these techniques allow OpenSolaris to achieve better network I/O performance in multiprocessing environments; however, network stack parallelization has also brought extra overheads for system. An effective and efficient network I/O optimization in multiprocessing environments is required to cross all levers of the network stack from network interface to application.

  14. Identification of differentially methylated loci using wavelet-based functional mixed models

    PubMed Central

    Lee, Wonyul; Morris, Jeffrey S.

    2016-01-01

    Motivation: DNA methylation is a key epigenetic modification that can modulate gene expression. Over the past decade, a lot of studies have focused on profiling DNA methylation and investigating its alterations in complex diseases such as cancer. While early studies were mostly restricted to CpG islands or promoter regions, recent findings indicate that many of important DNA methylation changes can occur in other regions and DNA methylation needs to be examined on a genome-wide scale. In this article, we apply the wavelet-based functional mixed model methodology to analyze the high-throughput methylation data for identifying differentially methylated loci across the genome. Contrary to many commonly-used methods that model probes independently, this framework accommodates spatial correlations across the genome through basis function modeling as well as correlations between samples through functional random effects, which allows it to be applied to many different settings and potentially leads to more power in detection of differential methylation. Results: We applied this framework to three different high-dimensional methylation data sets (CpG Shore data, THREE data and NIH Roadmap Epigenomics data), studied previously in other works. A simulation study based on CpG Shore data suggested that in terms of detection of differentially methylated loci, this modeling approach using wavelets outperforms analogous approaches modeling the loci as independent. For the THREE data, the method suggests newly detected regions of differential methylation, which were not reported in the original study. Availability and implementation: Automated software called WFMM is available at https://biostatistics.mdanderson.org/SoftwareDownload. CpG Shore data is available at http://rafalab.dfci.harvard.edu. NIH Roadmap Epigenomics data is available at http://compbio.mit.edu/roadmap. Supplementary information: Supplementary data are available at Bioinformatics online. Contact: jefmorris

  15. Studies on the π-π stacking features of imidazole units present in a series of 5-amino-1-alkylimidazole-4-carboxamides

    NASA Astrophysics Data System (ADS)

    Ray, Sibdas; Das, Aniruddha

    2015-06-01

    Reaction of 2-ethoxymethyleneamino-2-cyanoacetamide with primary alkyl amines in acetonitrile solvent affords 1-substituted-5-aminoimidazole-4-carboxamides. Single crystal X-ray diffraction studies of these imidazole compounds show that there are both anti-parallel and syn-parallel π-π stackings between two imidazole units in parallel-displaced (PD) conformations and the distance between two π-π stacked imidazole units depends mainly on the anti/ syn-parallel nature and to some extent on the alkyl group attached to N-1 of imidazole; molecules with anti-parallel PD-stacking arrangements of the imidazole units have got vertical π-π stacking distance short enough to impart stabilization whereas the imidazole unit having syn-parallel stacking arrangement have got much larger π-π stacking distances. DFT studies on a pair of anti-parallel imidazole units of such an AICA lead to curves for 'π-π stacking stabilization energy vs. π-π stacking distance' which have got similarity with the 'Morse potential energy diagram for a diatomic molecule' and this affords to find out a minimum π-π stacking distance corresponding to the maximum stacking stabilization energy between the pair of imidazole units. On the other hand, a DFT calculation based curve for 'π-π stacking stabilization energy vs. π-π stacking distance' of a pair of syn-parallel imidazole units is shown to have an exponential nature.

  16. TESTING FOR CPT VIOLATION IN Bstack">0stack">s SEMILEPTONIC DECAYS

    NASA Astrophysics Data System (ADS)

    Kooten, R. Van

    2014-01-01

    A DØ analysis measuring the charge asymmetry Astack">bstack">sl of like-sign dimuon events due to semileptonic b-hadron decays at the Fermilab Tevatron Collider has shown indications of possible anomalous CP violation in the mixing of neutral B mesons. This result has been used to extract the first senstivity to CPT violation in the Bstack">0stack">s system. An analysis to explore further this anomaly by specifically measuring the semileptonic charge asymmetry, astack">sstack">sl, in Bstack">0stack">s decays is described, as well as how a variant of this analysis can be used to explore a larger set of CPT-violating parameters in the Bstack">0stack">s system for the first time.

  17. Differential evolution algorithm-based kernel parameter selection for Fukunaga-Koontz Transform subspaces construction

    NASA Astrophysics Data System (ADS)

    Binol, Hamidullah; Bal, Abdullah; Cukur, Huseyin

    2015-10-01

    The performance of the kernel based techniques depends on the selection of kernel parameters. That's why; suitable parameter selection is an important problem for many kernel based techniques. This article presents a novel technique to learn the kernel parameters in kernel Fukunaga-Koontz Transform based (KFKT) classifier. The proposed approach determines the appropriate values of kernel parameters through optimizing an objective function constructed based on discrimination ability of KFKT. For this purpose we have utilized differential evolution algorithm (DEA). The new technique overcomes some disadvantages such as high time consumption existing in the traditional cross-validation method, and it can be utilized in any type of data. The experiments for target detection applications on the hyperspectral images verify the effectiveness of the proposed method.

  18. Progress of MCFC stack technology at Toshiba

    SciTech Connect

    Hori, M.; Hayashi, T.; Shimizu, Y.

    1996-12-31

    Toshiba is working on the development of MCFC stack technology; improvement of cell characteristics, and establishment of separator technology. For the cell technology, Toshiba has concentrated on both the restraints of NiO cathode dissolution and electrolyte loss from cells, which are the critical issues to extend cell life in MCFC, and great progress has been made. On the other hand, recognizing that the separator is one of key elements in accomplishing reliable and cost-competitive MCFC stacks, Toshiba has been accelerating the technology establishment and verification of an advanced type separator. A sub-scale stack with such a separator was provided for an electric generating test, and has been operated for more than 10,000 hours. This paper presents several topics obtained through the technical activities in the MCFC field at Toshiba.

  19. High frequency model of stacked film capacitors

    NASA Astrophysics Data System (ADS)

    Talbert, T.; Joubert, C.; Daude, N.; Glaize, C.

    2001-11-01

    Polypropylene metallized capacitors are of general use in power electronics because of their reliability, their self-healing capabilities, and their low price. Though the behavior of metallized coiled capacitors has been discussed, no work has been carried out on stacked and flattened metallized capacitors. The purpose of this article is to suggest an analytical model of resonance frequency, stray inductance and impedance of stacked capacitors. We first solve the equation of propagation of the magnetic potential vector (A) in the dielectric of an homogeneous material. Then, we suggest an original method of resolution, like the one used for resonant cavities, in order to present an analytical solution of the problem. Finally, we give some experimental results proving that the physical knowledge of the parameters of the capacitor (dimension of the component, and material constants), enables us to calculate an analytical model of resonance frequency, stray inductance and impedance of stacked capacitors.

  20. Research of differentiated QoS routing in GMPLS-based IP/WDM networks

    NASA Astrophysics Data System (ADS)

    Wang, YiYun; Zeng, QingJi; Cao, JunWen

    2004-04-01

    At this point in technology's evolution, the simplicity, elegance, extensibility, and broad compatibility of the Internet protocol suite has made it the automatic choice for most forms of communication. The attempts at resolution of this apparent dichotomy consist of a collection of technologies and philosophies known as Quality of Service. In an IP network, QoS defines the ability to compensate for traffic characteristics without compromising average throughput. Clearly, optimizing QoS performance for all traffic types on an IP network presents a daunting challenge. To partially address this challenge, several Internet Engineering Task Force groups have been working on standardized approaches for IP-based QoS technologies. The IETF"s approaches fall into four categories: prioritization using differentiated services, reservation using integrated services, label switching using multi-protocol label switching, bandwidth management using the subnet bandwidth manager. Differentiated services classify per-hop behaviors on the basis of a Diffserv code point attached to the type of service byte in each packet"s IP header. This DSCP approach represents a form of soft QoS that rather coarsely classifies services through packet marking. The differentiated QoS routing in GMPLS-based IP/WDM Networks are a promising candidate for the next generation optical Internet networks. By using a unified control plane, such networks make more efficient usage of network resources both at the IP layer and the WDM optical layer. In this paper, we consider prioritized routing of bandwidth-guaranteed Label Switched paths (LSPs) providing service differentiation between classes of high and normal priority traffic. The QoS delay requirements are assumed to be translated into bandwidth and O-E-O conversion requirements. We present a graphical representation of the integrated network state which is different from other conventional graphical representations in that it models the cost of usage of

  1. Three wafer stacking for 3D integration.

    SciTech Connect

    Greth, K. Douglas; Ford, Christine L.; Lantz, Jeffrey W.; Shinde, Subhash L.; Timon, Robert P.; Bauer, Todd M.; Hetherington, Dale Laird; Sanchez, Carlos Anthony

    2011-11-01

    Vertical wafer stacking will enable a wide variety of new system architectures by enabling the integration of dissimilar technologies in one small form factor package. With this LDRD, we explored the combination of processes and integration techniques required to achieve stacking of three or more layers. The specific topics that we investigated include design and layout of a reticle set for use as a process development vehicle, through silicon via formation, bonding media, wafer thinning, dielectric deposition for via isolation on the wafer backside, and pad formation.

  2. Fuel cell stack monitoring and system control

    DOEpatents

    Keskula, Donald H.; Doan, Tien M.; Clingerman, Bruce J.

    2004-02-17

    A control method for monitoring a fuel cell stack in a fuel cell system in which the actual voltage and actual current from the fuel cell stack are monitored. A preestablished relationship between voltage and current over the operating range of the fuel cell is established. A variance value between the actual measured voltage and the expected voltage magnitude for a given actual measured current is calculated and compared with a predetermined allowable variance. An output is generated if the calculated variance value exceeds the predetermined variance. The predetermined voltage-current for the fuel cell is symbolized as a polarization curve at given operating conditions of the fuel cell.

  3. The effect of pi-stacking, h-bonding, and electrostatic interactions on the ionization energies of nucleic acid bases: adenine-adenine, thymine-thymine and adenine-thymine dimers

    SciTech Connect

    Bravaya, Ksenia B.; Kostko, Oleg; Ahmed, Musahid; Krylov, Anna I.

    2009-09-02

    A combined theoretical and experimental study of the ionized dimers of thymine and adenine, TT, AA, and AT, is presented. Adiabatic and vertical ionization energies(IEs) for monomers and dimers as well as thresholds for the appearance of the protonated species are reported and analyzed. Non-covalent interactions stronglyaffect the observed IEs. The magnitude and the nature of the effect is different for different isomers of the dimers. The computations reveal that for TT, the largestchanges in vertical IEs (0.4 eV) occur in asymmetric h-bonded and symmetric pi- stacked isomers, whereas in the lowest-energy symmetric h-bonded dimer the shiftin IEs is much smaller (0.1 eV). The origin of the shift and the character of the ionized states is different in asymmetric h-bonded and symmetric stacked isomers. Inthe former, the initial hole is localized on one of the fragments, and the shift is due to the electrostatic stabilization of the positive charge of the ionized fragment by thedipole moment of the neutral fragment. In the latter, the hole is delocalized, and the change in IE is proportional to the overlap of the fragments' MOs. The shifts in AAare much smaller due to a less effcient overlap and a smaller dipole moment. The ionization of the h-bonded dimers results in barrierless (or nearly barrierless) protontransfer, whereas the pi-stacked dimers relax to structures with the hole stabilized by the delocalization or electrostatic interactions.

  4. Managing multiple image stacks from confocal laser scanning microscopy

    NASA Astrophysics Data System (ADS)

    Zerbe, Joerg; Goetze, Christian H.; Zuschratter, Werner

    1999-05-01

    A major goal in neuroanatomy is to obtain precise information about the functional organization of neuronal assemblies and their interconnections. Therefore, the analysis of histological sections frequently requires high resolution images in combination with an overview about the structure. To overcome this conflict we have previously introduced a software for the automatic acquisition of multiple image stacks (3D-MISA) in confocal laser scanning microscopy. Here, we describe a Windows NT based software for fast and easy navigation through the multiple images stacks (MIS-browser), the visualization of individual channels and layers and the selection of user defined subregions. In addition, the MIS browser provides useful tools for the visualization and evaluation of the datavolume, as for instance brightness and contrast corrections of individual layers and channels. Moreover, it includes a maximum intensity projection, panning and zoom in/out functions within selected channels or focal planes (x/y) and tracking along the z-axis. The import module accepts any tiff-format and reconstructs the original image arrangement after the user has defined the sequence of images in x/y and z and the number of channels. The implemented export module allows storage of user defined subregions (new single image stacks) for further 3D-reconstruction and evaluation.

  5. Oxidative unzipping of stacked nitrogen-doped carbon nanotube cups.

    PubMed

    Dong, Haifeng; Zhao, Yong; Tang, Yifan; Burkert, Seth C; Star, Alexander

    2015-05-27

    We demonstrate a facile synthesis of different nanostructures by oxidative unzipping of stacked nitrogen-doped carbon nanotube cups (NCNCs). Depending on the initial number of stacked-cup segments, this method can yield graphene nanosheets (GNSs) or hybrid nanostructures comprised of graphene nanoribbons partially unzipped from a central nanotube core. Due to the stacked-cup structure of as-synthesized NCNCs, preventing complete exposure of graphitic planes, the unzipping mechanism is hindered, resulting in incomplete unzipping; however, individual, separated NCNCs are completely unzipped, yielding individual nitrogen-doped GNSs. Graphene-based materials have been employed as electrocatalysts for many important chemical reactions, and it has been proposed that increasing the reactive edges results in more efficient electrocatalysis. In this paper, we apply these graphene conjugates as electrocatalysts for the oxygen reduction reaction (ORR) to determine how the increase in reactive edges affects the electrocatalytic activity. This investigation introduces a new method for the improvement of ORR electrocatalysts by using nitrogen dopants more effectively, allowing for enhanced ORR performance with lower overall nitrogen content. Additionally, the GNSs were functionalized with gold nanoparticles (GNPs), resulting in a GNS/GNP hybrid, which shows efficient surface-enhanced Raman scattering and expands the scope of its application in advanced device fabrication and biosensing.

  6. Investigation into the Influence of Physician for Treatment Based on Syndrome Differentiation

    PubMed Central

    Jiang, Lijie; Liu, Baoyan; Xie, Qi; Yang, Shuhong; He, Liyun; Yan, Shiyan; Liu, Jia

    2013-01-01

    Background. The characteristics of treatment based on syndrome differentiation (TBSD) cause great challenges to evaluate the effectiveness of the clinical methods. Objectives. This paper aims to evaluate the influence of physician to personalized medicine in the process of TBSD. Methods. We performed a randomized, triple-blind trial involving patients of primary insomnia treated by 3 physicians individually and independently. The patients (n = 30) were randomly assigned to receive treatments by the 3 physicians for every visit. However, they always received the treatment, respectively, prescribed by the physician at the first visit. The primary outcome was evaluated, respectively, by the Pittsburgh Sleep Quality Index (PSQI) and the TCM symptoms measuring scale. The clinical practices of the physicians were recorded at every visit including diagnostic information, syndrome differentiation, treating principles, and prescriptions. Results. All patients in the 3 groups (30 patients) showed significant improvements (>66%) according to the PSQI and TCM symptoms measuring scale. Conclusion. The results indicate that although with comparable effectiveness, there exist significant differences in syndrome differentiation, the treating principles, and the prescriptions of the approaches used by the 3 physicians. This means that the physician should be considered as an important factor for individualized medicine and the related TCM clinical research. PMID:24288563

  7. Differential-pressure-based fiber-optic temperature sensor using Fabry-Perot interferometry.

    PubMed

    Liu, Tiegen; Yin, Jinde; Jiang, Junfeng; Liu, Kun; Wang, Shuang; Zou, Shengliang

    2015-03-15

    We propose a novel fiber-optic Fabry-Perot interferometric (FFPI) temperature sensor based on differential pressure resulting from thermal expansion of sealed air. A thin silicon diaphragm is sandwiched between two micro-circular cavity-structured Pyrex plates to construct a FP and an air cavity. The thermal expansion of sealed air induces differential pressure variation between cavities and thus the deformation of thin diaphragm, which transfers temperature change into cavity length shift of FP interferometer. Theory analysis results indicate that the temperature-sensitivity can be designed flexibly by choosing the parameters of radius and thickness of silicon diaphragm, and the differential pressure between two cavities. Experimental results demonstrate that the temperature sensitivity of 6.07 nm/°C is achieved with the resolution of 0.10°C under the range of -50°C to 100°C, and the response time is around 1.3 s with temperature change from 28°C to 100°C.

  8. Characteristics and mechanisms of the two types of photoelectric differential response of bacteriorhodopsin-based photocell.

    PubMed

    Yao, Baoli; Wang, Yingli; Lei, Ming; Zheng, Yuan

    2003-12-15

    Bacteriorhodopsin (BR)-based photocells have been assigned possessing differential photoelectric response. But recently we found that the differential response described before, which occurred in milliseconds to seconds, outputting a positive pulse when light was on and a negative pulse when light was off, was not the intrinsic property of the BR molecule. It was partially caused by the measuring circuit. By measuring the photoelectric response signal of the BR film photocell to a short laser pulse, the impulse response function of the BR film photocell was obtained by data fitting with MATLAB software. A simulation system was accordingly developed. The output response signals of the BR film photocell under different stepping incident light were calculated. By simulation and analysis, it was concluded that the differential response caused by the intrinsic property of the BR molecule happened in microseconds time scale, and it produced a negative pulse when light was on and a positive pulse when light was off. It was much faster but much weaker than that described before.

  9. The differentiation of camel breeds based on meat measurements using discriminant analysis.

    PubMed

    Al-Atiyat, Raed Mahmoud; Suliman, Gamal; AlSuhaibani, Entissar; El-Waziry, Ahmad; Al-Owaimer, Abdullah; Basmaeil, Saeid

    2016-06-01

    The meat productivity of camel in the tropics is still under investigation for identification of better meat breed or type. Therefore, four one-humped Saudi Arabian (SA) camel breeds, Majaheem, Maghateer, Hamrah, and Safrah were experimented in order to differentiate them from each other based on meat measurements. The measurements were biometrical meat traits measured on six intact males from each breed. The results showed higher values of the Majaheem breed than that obtained for the other breeds except few cases such dressing percentage and rib-eye area. In differentiation analysis, the most discriminating meat variables were myofibrillar protein index, meat color components (L* and a*, b*), and cooking loss. Consequently, the Safrah and the Majaheem breeds presented the largest dissimilarity as evidenced by their multivariate means. The canonical discriminant analysis allowed an additional understanding of the differentiation between breeds. Furthermore, two large clusters, one formed by Hamrah and Maghateer in one group along with Safrah. These classifications may assign each breed into one cluster considering they are better as meat producers. The Majaheem was clustered alone in another cluster that might be a result of being better as milk producers. Nevertheless, the productivity type of the camel breeds of SA needs further morphology and genetic descriptions.

  10. Differential diagnosis of ovarian tumors based primarily on their patterns and cell types.

    PubMed

    Young, R H; Scully, R E

    2001-08-01

    The differential diagnosis of ovarian tumors is reviewed based on their patterns and cell types. This approach, which differs from the standard textbook discussion of each neoplasm as an entity, has practical value as differential diagnosis depends largely on the pattern or patterns and cell type or types of tumors. Awareness of the broad range of lesions that may exhibit particular patterns or contain one or more cell types is crucial in formulating a differential diagnosis. The following patterns are considered: moderate-to-large-glandular and hollow-tubular; solid tubular and pseudotubular; cords and ribbons; insular; trabecular; slit-like and reticular spaces; microglandular and microfollicular; macrofollicular and pseudomacrofollicular; papillary; diffuse; fibromatous-thecomatous; and biphasic and pseudobiphasic. The following cell types are considered: small round cells; spindle cells; mucinous cells, comprising columnar, goblet cell and signet ring cell subtypes; clear cells; hobnail cells; oxyphil cells; and transitional cells. The morphologic diversity of ovarian tumors poses many challenges; knowledge of the occurrence and frequency of these patterns and cell types in various tumors and tumor-like lesions is of paramount diagnostic importance. A specific diagnosis can usually be made by evaluating routinely stained slides, but much less often, special staining, immunohistochemical staining or, very rarely, ultrastructural examination is also required. Finally, clinical data, operative findings, and gross features of the lesions may provide important, and at times decisive diagnostic clues.

  11. Dielectrophoresis based discrimination of human embryonic stem cells from differentiating derivatives

    PubMed Central

    Velugotla, Srinivas; Pells, Steve; Mjoseng, Heidi K.; Duffy, Cairnan R. E.; Smith, Stewart; De Sousa, Paul; Pethig, Ronald

    2012-01-01

    Assessment of the dielectrophoresis (DEP) cross-over frequency (fxo), cell diameter, and derivative membrane capacitance (Cm) values for a group of undifferentiated human embryonic stem cell (hESC) lines (H1, H9, RCM1, RH1), and for a transgenic subclone of H1 (T8) revealed that hESC lines could not be discriminated on their mean fxo and Cm values, the latter of which ranged from 14 to 20 mF/m2. Differentiation of H1 and H9 to a mesenchymal stem cell-like phenotype resulted in similar significant increases in mean Cm values to 41–49 mF/m2 in both lines (p < 0.0001). BMP4-induced differentiation of RCM1 to a trophoblast cell-like phenotype also resulted in a distinct and significant increase in mean Cm value to 28 mF/m2 (p < 0.0001). The progressive transition to a higher membrane capacitance was also evident after each passage of cell culture as H9 cells transitioned to a mesenchymal stem cell-like state induced by growth on a substrate of hyaluronan. These findings confirm the existence of distinctive parameters between undifferentiated and differentiating cells on which future application of dielectrophoresis in the context of hESC manufacturing can be based. PMID:24339846

  12. Magnetic resonance imaging-based volumetry differentiates progressive supranuclear palsy from corticobasal degeneration.

    PubMed

    Gröschel, Klaus; Hauser, Till-Karsten; Luft, Andreas; Patronas, Nicholas; Dichgans, Johannes; Litvan, Irene; Schulz, Jörg B

    2004-02-01

    Because there are no biological markers for the clinical diagnosis of progressive supranuclear palsy (PSP) and corticobasal degeneration (CBD), we established a mathematical model based on three-dimensional magnetic resonance (MR) imaging to differentiate between these parkinsonian disorders. Using MR imaging-based volumetry we studied the pattern of atrophic changes in patients with probable, possible or definite PSP (n = 33) or CBD (n = 18). Patients were compared with 22 controls with similar age. To establish a mathematical model that would allow for differentiation of PSP, CBD and controls we performed a discriminant analysis. We found a significant reduction in average brain, brainstem, midbrain and frontal gray matter volumes in patients with PSP, whereas patients with CBD showed atrophy of parietal cortex and corpus callosum. With the exception of reduced midbrain volumes in PSP, the measured volumes of anatomical structures showed an extensive overlap with the normal range on an individual basis. Using only post mortem confirmed cases of PSP (n = 8) and CBD (n = 7) as well as all controls, the volumes of midbrain, parietal white matter, temporal gray matter, brainstem, frontal white matter and pons were identified to separate best between groups and were used to construct a model with two canonical variables. This model allowed to correctly predict the diagnosis in 95% of controls as well as in 76% of all PSP and 83% of all CBD patients. Similar results were obtained only when patients with a possible and probable diagnosis of PSP and CBD, who were not involved in the development of the discriminant analysis, were classified. 3D-MR imaging-based volumetry may help to differentiate PSP from CBD ante mortem.

  13. Differential geometry-based solvation and electrolyte transport models for biomolecular modeling: a review

    SciTech Connect

    Wei, Guowei; Baker, Nathan A.

    2016-11-11

    This chapter reviews the differential geometry-based solvation and electrolyte transport for biomolecular solvation that have been developed over the past decade. A key component of these methods is the differential geometry of surfaces theory, as applied to the solvent-solute boundary. In these approaches, the solvent-solute boundary is determined by a variational principle that determines the major physical observables of interest, for example, biomolecular surface area, enclosed volume, electrostatic potential, ion density, electron density, etc. Recently, differential geometry theory has been used to define the surfaces that separate the microscopic (solute) domains for biomolecules from the macroscopic (solvent) domains. In these approaches, the microscopic domains are modeled with atomistic or quantum mechanical descriptions, while continuum mechanics models (including fluid mechanics, elastic mechanics, and continuum electrostatics) are applied to the macroscopic domains. This multiphysics description is integrated through an energy functional formalism and the resulting Euler-Lagrange equation is employed to derive a variety of governing partial differential equations for different solvation and transport processes; e.g., the Laplace-Beltrami equation for the solvent-solute interface, Poisson or Poisson-Boltzmann equations for electrostatic potentials, the Nernst-Planck equation for ion densities, and the Kohn-Sham equation for solute electron density. Extensive validation of these models has been carried out over hundreds of molecules, including proteins and ion channels, and the experimental data have been compared in terms of solvation energies, voltage-current curves, and density distributions. We also propose a new quantum model for electrolyte transport.

  14. Analysis of stacking overlap in nucleic acid structures: algorithm and application

    NASA Astrophysics Data System (ADS)

    Pingali, Pavan Kumar; Halder, Sukanya; Mukherjee, Debasish; Basu, Sankar; Banerjee, Rahul; Choudhury, Devapriya; Bhattacharyya, Dhananjay

    2014-08-01

    RNA contains different secondary structural motifs like pseudo-helices, hairpin loops, internal loops, etc. in addition to anti-parallel double helices and random coils. The secondary structures are mainly stabilized by base-pairing and stacking interactions between the planar aromatic bases. The hydrogen bonding strength and geometries of base pairs are characterized by six intra-base pair parameters. Similarly, stacking can be represented by six local doublet parameters. These dinucleotide step parameters can describe the quality of stacking between Watson-Crick base pairs very effectively. However, it is quite difficult to understand the stacking pattern for dinucleotides consisting of non canonical base pairs from these parameters. Stacking interaction is a manifestation of the interaction between two aromatic bases or base pairs and thus can be estimated best by the overlap area between the planar aromatic moieties. We have calculated base pair overlap between two consecutive base pairs as the buried van der Waals surface between them. In general, overlap values show normal distribution for the Watson-Crick base pairs in most double helices within a range from 45 to 50 Å2 irrespective of base sequence. The dinucleotide steps with non-canonical base pairs also are seen to have high overlap value, although their twist and few other parameters are rather unusual. We have analyzed hairpin loops of different length, bulges within double helical structures and pseudo-continuous helices using our algorithm. The overlap area analyses indicate good stacking between few looped out bases especially in GNRA tetraloop, which was difficult to quantitatively characterise from analysis of the base pair or dinucleotide step parameters. This parameter is also seen to be capable to distinguish pseudo-continuous helices from kinked helix junctions.

  15. Operating range of a differential-absorption lidar based on a CO{sub 2} laser

    SciTech Connect

    Ivashchenko, M V; Sherstov, I V

    2000-08-31

    The echolocation range and the remote sensing of ethylene in the atmosphere are simulated for a differential-absorption lidar based on TEA CO{sub 2} lasers. The dependence of the lidar echolocation range on the energy and the peak power of probe pulses is shown to be close to logarithmic. It is demonstrated that the use of narrow-band spectral filters is justified only for low-noise detectors and viewing angles of the receiver exceeding 5 mrad. The relative measurement error of the ethylene concentration in the atmosphere is estimated for various detection modes. (laser applications and other topics in quantum electronics)

  16. Investigation of three-terminal organic-based devices with memory effect and negative differential resistance

    NASA Astrophysics Data System (ADS)

    Yu, Li-Zhen; Lee, Ching-Ting

    2009-09-01

    The current-voltage characteristics of the gate-controlled three-terminal organic-based devices with memory effect and negative differential resistances (NDR) were studied. Gold and 9,10-di(2-naphthyl)anthracene (ADN) were used as the metal electrode and active channel layer of the devices, respectively. By using various gate-source voltages, the memory and NDR characteristics of the devices can be modulated. The memory and NDR characteristics of the devices were attributed to the formation of trapping sites in the interface between Au electrode and ADN active layer caused by the defects, when Au metal deposited on the ADN active layer.

  17. Multiobjective Image Color Quantization Algorithm Based on Self-Adaptive Hybrid Differential Evolution

    PubMed Central

    Xia, Xuewen

    2016-01-01

    In recent years, some researchers considered image color quantization as a single-objective problem and applied heuristic algorithms to solve it. This paper establishes a multiobjective image color quantization model with intracluster distance and intercluster separation as its objectives. Inspired by a multipopulation idea, a multiobjective image color quantization algorithm based on self-adaptive hybrid differential evolution (MoDE-CIQ) is then proposed to solve this model. Two numerical experiments on four common test images are conducted to analyze the effectiveness and competitiveness of the multiobjective model and the proposed algorithm. PMID:27738423

  18. Adaptive Failure Compensation for Aircraft Tracking Control Using Engine Differential Based Model

    NASA Technical Reports Server (NTRS)

    Liu, Yu; Tang, Xidong; Tao, Gang; Joshi, Suresh M.

    2006-01-01

    An aircraft model that incorporates independently adjustable engine throttles and ailerons is employed to develop an adaptive control scheme in the presence of actuator failures. This model captures the key features of aircraft flight dynamics when in the engine differential mode. Based on this model an adaptive feedback control scheme for asymptotic state tracking is developed and applied to a transport aircraft model in the presence of two types of failures during operation, rudder failure and aileron failure. Simulation results are presented to demonstrate the adaptive failure compensation scheme.

  19. Differentiation of red wines using an electronic nose based on surface acoustic wave devices.

    PubMed

    García, M; Fernández, M J; Fontecha, J L; Lozano, J; Santos, J P; Aleixandre, M; Sayago, I; Gutiérrez, J; Horrillo, M C

    2006-02-15

    An electronic nose, utilizing the principle of surface acoustic waves (SAW), was used to differentiate among different wines of the same variety of grapes which come from the same cellar. The electronic nose is based on eight surface acoustic wave sensors, one is a reference sensor and the others are coated by different polymers by spray coating technique. Data analysis was performed by two pattern recognition methods; principal component analysis (PCA) and probabilistic neuronal network (PNN). The results showed that electronic nose was able to identify the tested wines.

  20. Structural and quantum chemical analysis of exciton coupling in homo- and heteroaggregate stacks of merocyanines

    PubMed Central

    Bialas, David; Zitzler-Kunkel, André; Kirchner, Eva; Schmidt, David; Würthner, Frank

    2016-01-01

    Exciton coupling is of fundamental importance and determines functional properties of organic dyes in (opto-)electronic and photovoltaic devices. Here we show that strong exciton coupling is not limited to the situation of equal chromophores as often assumed. Quadruple dye stacks were obtained from two bis(merocyanine) dyes with same or different chromophores, respectively, which dimerize in less-polar solvents resulting in the respective homo- and heteroaggregates. The structures of the quadruple dye stacks were assigned by NMR techniques and unambiguously confirmed by single-crystal X-ray analysis. The heteroaggregate stack formed from the bis(merocyanine) bearing two different chromophores exhibits remarkably different ultraviolet/vis absorption bands compared with those of the homoaggregate of the bis(merocyanine) comprising two identical chromophores. Quantum chemical analysis based on an extension of Kasha's exciton theory appropriately describes the absorption properties of both types of stacks revealing strong exciton coupling also between different chromophores within the heteroaggregate. PMID:27680284

  1. Structural and quantum chemical analysis of exciton coupling in homo- and heteroaggregate stacks of merocyanines

    NASA Astrophysics Data System (ADS)

    Bialas, David; Zitzler-Kunkel, André; Kirchner, Eva; Schmidt, David; Würthner, Frank

    2016-09-01

    Exciton coupling is of fundamental importance and determines functional properties of organic dyes in (opto-)electronic and photovoltaic devices. Here we show that strong exciton coupling is not limited to the situation of equal chromophores as often assumed. Quadruple dye stacks were obtained from two bis(merocyanine) dyes with same or different chromophores, respectively, which dimerize in less-polar solvents resulting in the respective homo- and heteroaggregates. The structures of the quadruple dye stacks were assigned by NMR techniques and unambiguously confirmed by single-crystal X-ray analysis. The heteroaggregate stack formed from the bis(merocyanine) bearing two different chromophores exhibits remarkably different ultraviolet/vis absorption bands compared with those of the homoaggregate of the bis(merocyanine) comprising two identical chromophores. Quantum chemical analysis based on an extension of Kasha's exciton theory appropriately describes the absorption properties of both types of stacks revealing strong exciton coupling also between different chromophores within the heteroaggregate.

  2. A numerical study of cell-to-cell variations in a SOFC stack

    NASA Astrophysics Data System (ADS)

    Burt, A. C.; Celik, I. B.; Gemmen, R. S.; Smirnov, A. V.

    A numerical investigation of cell-to-cell voltage variation is performed by considering the impact of flow distribution and heat transfer on a SOFC stack. The stack model used is based on a one-dimensional co-flow cell model developed in prior work. The influence of radiative heat transfer between the PEN (positive electrode, electrolyte, negative electrode body) and the neighboring separator plates on the temperature distribution is also considered. Variations in cell voltage are attributed to asymmetries in stack geometry (boundary effects) and non-uniformity in flow rates, more particularly, flow thermal capacity. Simulations were done in a parallel computing environment with each cell computed in a separate (CPU) process. This natural decomposition of the fuel cell stack reduced the number of communicated variables thereby improving computational performance. The parallelization scheme implemented utilized a message passing interface (MPI) protocol where cell-to-cell communication is achieved via exchange of temperature and thermal fluxes between neighboring cells.

  3. Assessing differential expression in two-color microarrays: a resampling-based empirical Bayes approach.

    PubMed

    Li, Dongmei; Le Pape, Marc A; Parikh, Nisha I; Chen, Will X; Dye, Timothy D

    2013-01-01

    Microarrays are widely used for examining differential gene expression, identifying single nucleotide polymorphisms, and detecting methylation loci. Multiple testing methods in microarray data analysis aim at controlling both Type I and Type II error rates; however, real microarray data do not always fit their distribution assumptions. Smyth's ubiquitous parametric method, for example, inadequately accommodates violations of normality assumptions, resulting in inflated Type I error rates. The Significance Analysis of Microarrays, another widely used microarray data analysis method, is based on a permutation test and is robust to non-normally distributed data; however, the Significance Analysis of Microarrays method fold change criteria are problematic, and can critically alter the conclusion of a study, as a result of compositional changes of the control data set in the analysis. We propose a novel approach, combining resampling with empirical Bayes methods: the Resampling-based empirical Bayes Methods. This approach not only reduces false discovery rates for non-normally distributed microarray data, but it is also impervious to fold change threshold since no control data set selection is needed. Through simulation studies, sensitivities, specificities, total rejections, and false discovery rates are compared across the Smyth's parametric method, the Significance Analysis of Microarrays, and the Resampling-based empirical Bayes Methods. Differences in false discovery rates controls between each approach are illustrated through a preterm delivery methylation study. The results show that the Resampling-based empirical Bayes Methods offer significantly higher specificity and lower false discovery rates compared to Smyth's parametric method when data are not normally distributed. The Resampling-based empirical Bayes Methods also offers higher statistical power than the Significance Analysis of Microarrays method when the proportion of significantly differentially

  4. The evaluation of fatigue caused by plane-bending stress on stainless steel using the stacked-coil type magnetic sensor

    NASA Astrophysics Data System (ADS)

    Oka, Mohachiro; Yakushiji, Terutoshi; Enokizono, Masato

    2017-02-01

    To prevent injury from metal degradation of structural metallic material such as stainless steel, we have previously proposed fatigue evaluation methods such as the remnant magnetization method and the inductance method. These fatigue evaluation methods showed a positive correlation between the magnetic sensor output signal and the amount of the plane-bending fatigue damage in stainless steel. In this study, a stacked-coil type magnetic sensor was used to evaluate the accuracy of the plane-bending fatigue damage of austenite stainless steel such as SUS304 (ANSI304). The principle of the stacked-coil type magnetic sensor is based on an eddy-current test method. This magnetic sensor was composed of a pick-up coil, an excitation coil, and a Mn-Zn ferrite core. The pick-up coil was composed of two bobbin type coils that were connected differentially. Moreover, the amplitude and the phase angle of the output voltage of the pick-up coil were used to evaluate the amount of the plane-bending fatigue damage of SUS304. Results demonstrated a close correlation between the amplitude and the phase angle of the stacked-coil type magnetic sensor output voltage and the plane-bending fatigue damage of SUS304.

  5. Segmental and local dynamics of stacked thin films of poly(methyl methacrylate)

    NASA Astrophysics Data System (ADS)

    Hayashi, Tatsuhiko; Fukao, Koji

    2014-02-01

    The glass transition temperature and the dynamics of the α and β processes have been investigated using differential scanning calorimetry and dielectric relaxation spectroscopy during successive annealing processes above the glass transition temperature for stacked thin films of poly(methyl methacrylate) (PMMA) of various thicknesses. The glass transition temperature and the dynamics of the α process (segmental motion) of as-stacked PMMA thin films exhibit thin-film-like behavior, insofar as the glass transition temperature is depressed and the dynamics of the α process are faster than those of the bulk system. Annealing at high temperature causes the glass transition temperature to increase from the reduced value and causes the dynamics of the α process to become slower approaching those of the bulk. Contrary to the segmental motion, the relaxation time of the β process (local motion) of the stacked PMMA thin films is almost equal to that of the bulk PMMA and is unaffected by the annealing process. However, the relaxation strengths of both the α process and β process show a strong correlation between each other. The sum of the relaxation strengths remains almost unchanged, while the individual relaxation strengths change during the annealing process. The fragility index of the stacked PMMA thin films increases with annealing, which suggests that the glassy state of the stacked thin films changes from strong to fragile.

  6. Arrays of stacked metal coordination compounds

    DOEpatents

    Bulkowski, John E.

    1986-01-01

    A process is disclosed for preparing novel arrays of metal coordination compounds characterized by arrangement of the metal ions, separated by a linking agent, in stacked order one above the other. The process permits great flexibility in the design of the array. For example, layers of different composition can be added to the array at will.

  7. 49 CFR 178.606 - Stacking test.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... converts the static load of the stacking test into a load suitable for dynamic compression testing. 2.2 is...)(1) of this subpart; or (ii) The packaging may be tested using a dynamic compression testing machine... transportation. For the dynamic compression test, a container passes the test if, after application of...

  8. 49 CFR 178.606 - Stacking test.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... converts the static load of the stacking test into a load suitable for dynamic compression testing. 2.2 is...)(1) of this subpart; or (ii) The packaging may be tested using a dynamic compression testing machine... transportation. For the dynamic compression test, a container passes the test if, after application of...

  9. Explosive demolition of K East Reactor Stack

    SciTech Connect

    2010-07-26

    Using $420,000 in Recovery Act funds, the Department of Energy and contractor CH2M HILL Plateau Remediation Company topped off four months of preparations when they safely demolished the exhaust stack at the K East Reactor and equipment inside the reactor building on July 23, 2010.

  10. 49 CFR 178.980 - Stacking test.

    Code of Federal Regulations, 2014 CFR

    2014-10-01

    ... of their capacity and to their maximum net mass, with the load being evenly distributed. (c) Test... uniformly distributed superimposed test load for a period of at least five minutes (see paragraph (c)(5) of.... (3) Rigid plastic Large Packagings which bear the stacking load must be subjected to the test for...

  11. 49 CFR 178.980 - Stacking test.

    Code of Federal Regulations, 2012 CFR

    2012-10-01

    ... of their capacity and to their maximum net mass, with the load being evenly distributed. (c) Test... uniformly distributed superimposed test load for a period of at least five minutes (see paragraph (c)(5) of.... (3) Rigid plastic Large Packagings which bear the stacking load must be subjected to the test for...

  12. 49 CFR 178.980 - Stacking test.

    Code of Federal Regulations, 2011 CFR

    2011-10-01

    ... of their capacity and to their maximum net mass, with the load being evenly distributed. (c) Test... uniformly distributed superimposed test load for a period of at least five minutes (see paragraph (c)(5) of.... (3) Rigid plastic Large Packagings which bear the stacking load must be subjected to the test for...

  13. 49 CFR 178.980 - Stacking test.

    Code of Federal Regulations, 2010 CFR

    2010-10-01

    ... subjected to a uniformly distributed superimposed test load for a period of at least five minutes (see... test for 28 days at 40 °C (104 °F). (4) For all Large Packagings, the load must be applied by one of... permissible gross mass and stacked on the test Large Packaging; (ii) The calculated superimposed test...

  14. 40 CFR 61.53 - Stack sampling.

    Code of Federal Regulations, 2011 CFR

    2011-07-01

    ... EMISSION STANDARDS FOR HAZARDOUS AIR POLLUTANTS National Emission Standard for Mercury § 61.53 Stack sampling. (a) Mercury ore processing facility. (1) Unless a waiver of emission testing is obtained under § 61.13, each owner or operator processing mercury ore shall test emissions from the source...

  15. 40 CFR 61.53 - Stack sampling.

    Code of Federal Regulations, 2010 CFR

    2010-07-01

    ... EMISSION STANDARDS FOR HAZARDOUS AIR POLLUTANTS National Emission Standard for Mercury § 61.53 Stack sampling. (a) Mercury ore processing facility. (1) Unless a waiver of emission testing is obtained under § 61.13, each owner or operator processing mercury ore shall test emissions from the source...

  16. Explosive demolition of K East Reactor Stack

    ScienceCinema

    None

    2016-07-12

    Using $420,000 in Recovery Act funds, the Department of Energy and contractor CH2M HILL Plateau Remediation Company topped off four months of preparations when they safely demolished the exhaust stack at the K East Reactor and equipment inside the reactor building on July 23, 2010.

  17. Average Transmission Probability of a Random Stack

    ERIC Educational Resources Information Center

    Lu, Yin; Miniatura, Christian; Englert, Berthold-Georg

    2010-01-01

    The transmission through a stack of identical slabs that are separated by gaps with random widths is usually treated by calculating the average of the logarithm of the transmission probability. We show how to calculate the average of the transmission probability itself with the aid of a recurrence relation and derive analytical upper and lower…

  18. Arrays of stacked metal coordination compounds

    DOEpatents

    Bulkowski, J.E.

    1986-10-21

    A process is disclosed for preparing novel arrays of metal coordination compounds characterized by arrangement of the metal ions, separated by a linking agent, in stacked order one above the other. The process permits great flexibility in the design of the array. For example, layers of different composition can be added to the array at will. 3 figs.

  19. Removing Sulphur Dioxide From Stack Gases

    ERIC Educational Resources Information Center

    Slack, A. V.

    1973-01-01

    Process types, process concepts, claims and counterclaims, cost factors, and the level of developed technology for sulfur dioxide control in stack gases are focused upon and evaluated. Wet and dry processes as well as recovery and throwaway processes are compared. (BL)

  20. Stack Gas Scrubber Makes the Grade

    ERIC Educational Resources Information Center

    Chemical and Engineering News, 1975

    1975-01-01

    Describes a year long test of successful sulfur dioxide removal from stack gas with a calcium oxide slurry. Sludge disposal problems are discussed. Cost is estimated at 0.6 mill per kwh not including sludge removal. A flow diagram and equations are included. (GH)