Large eddy simulation of incompressible turbulent channel flow

NASA Technical Reports Server (NTRS)

Moin, P.; Reynolds, W. C.; Ferziger, J. H.

1978-01-01

The three-dimensional, time-dependent primitive equations of motion were numerically integrated for the case of turbulent channel flow. A partially implicit numerical method was developed. An important feature of this scheme is that the equation of continuity is solved directly. The residual field motions were simulated through an eddy viscosity model, while the large-scale field was obtained directly from the solution of the governing equations. An important portion of the initial velocity field was obtained from the solution of the linearized Navier-Stokes equations. The pseudospectral method was used for numerical differentiation in the horizontal directions, and second-order finite-difference schemes were used in the direction normal to the walls. The large eddy simulation technique is capable of reproducing some of the important features of wall-bounded turbulent flows. The resolvable portions of the root-mean square wall pressure fluctuations, pressure velocity-gradient correlations, and velocity pressure-gradient correlations are documented.

Topographic Effects on Geologic Mass Movements

NASA Technical Reports Server (NTRS)

Baloga, Stephen M.; Frey, Herbert (Technical Monitor)

2000-01-01

This report describes research directed toward understanding the response of volcanic lahars and lava flows to changes in the topography along the path of the flow. We have used a variety of steady-state and time-dependent models of lahars and lava flows to calculate the changes in flow dynamics due to variable topography. These models are based on first-order partial differential equations for the local conservation of volume. A global volume conservation requirement is also imposed to determine the extent of the flow as a function of time and the advance rate. Simulated DEMs have been used in this report.

Turbine blade tip flow discouragers

DOEpatents

Bunker, Ronald Scott

2000-01-01

A turbine assembly comprises a plurality of rotating blade portions in a spaced relation with a stationery shroud. The rotating blade portions comprise a root section, a tip portion and an airfoil. The tip portion has a pressure side wall and a suction side wall. A number of flow discouragers are disposed on the blade tip portion. In one embodiment, the flow discouragers extend circumferentially from the pressure side wall to the suction side wall so as to be aligned generally parallel to the direction of rotation. In an alternative embodiment, the flow discouragers extend circumferentially from the pressure side wall to the suction side wall so as to be aligned at an angle in the range between about 0.degree. to about 60.degree. with respect to a reference axis aligned generally parallel to the direction of rotation. The flow discouragers increase the flow resistance and thus reduce the flow of hot gas flow leakage for a given pressure differential across the blade tip portion so as to improve overall turbine efficiency.

Instability and associated roll structure of Marangoni convection in high Prandtl number liquid bridge with large aspect ratio

NASA Astrophysics Data System (ADS)

Yano, T.; Nishino, K.; Kawamura, H.; Ueno, I.; Matsumoto, S.

2015-02-01

This paper reports the experimental results on the instability and associated roll structures (RSs) of Marangoni convection in liquid bridges formed under the microgravity environment on the International Space Station. The geometry of interest is high aspect ratio (AR = height/diameter ≥ 1.0) liquid bridges of high Prandtl number fluids (Pr = 67 and 207) suspended between coaxial disks heated differentially. The unsteady flow field and associated RSs were revealed with the three-dimensional particle tracking velocimetry. It is found that the flow field after the onset of instability exhibits oscillations with azimuthal mode number m = 1 and associated RSs traveling in the axial direction. The RSs travel in the same direction as the surface flow (co-flow direction) for 1.00 ≤ AR ≤ 1.25 while they travel in the opposite direction (counter-flow direction) for AR ≥ 1.50, thus showing the change of traveling directions with AR. This traveling direction for AR ≥ 1.50 is reversed to the co-flow direction when the temperature difference between the disks is increased to the condition far beyond the critical one. This change of traveling directions is accompanied by the increase of the oscillation frequency. The characteristics of the RSs for AR ≥ 1.50, such as the azimuthal mode of oscillation, the dimensionless oscillation frequency, and the traveling direction, are in reasonable agreement with those of the previous sounding rocket experiment for AR = 2.50 and those of the linear stability analysis of an infinite liquid bridge.

Unsteady boundary layer rotating flow and heat transfer in a copper-water nanofluid over a shrinking sheet

NASA Astrophysics Data System (ADS)

Dzulkifli, Nor Fadhilah; Bachok, Norfifah; Yacob, Nor Azizah; Arifin, Norihan Md; Rosali, Haliza

2017-04-01

The study of unsteady three-dimensional boundary layer rotating flow with heat transfer in Copper-water nanofluid over a shrinking sheet is discussed. The governing equations in terms of partial differential equations are transformed to ordinary differential equations by introducing the appropriate similarity variables which are then solved numerically by a shooting method with Maple software. The numerical results of velocity gradient in x and y directions, skin friction coefficient and local Nusselt number as well as dual velocity and temperature profiles are shown graphically. The study revealed that dual solutions exist in certain range of s > 0.

Dual solutions of three-dimensional flow and heat transfer over a non-linearly stretching/shrinking sheet

NASA Astrophysics Data System (ADS)

Naganthran, Kohilavani; Nazar, Roslinda; Pop, Ioan

2018-05-01

This study investigated the influence of the non-linearly stretching/shrinking sheet on the boundary layer flow and heat transfer. A proper similarity transformation simplified the system of partial differential equations into a system of ordinary differential equations. This system of similarity equations is then solved numerically by using the bvp4c function in the MATLAB software. The generated numerical results presented graphically and discussed in the relevance of the governing parameters. Dual solutions found as the sheet stretched and shrunk in the horizontal direction. Stability analysis showed that the first solution is physically realizable whereas the second solution is not practicable.

Apparatus for removal of particulate matter from gas streams

DOEpatents

Smith, Peyton L.; Morse, John C.

2000-01-01

An apparatus for the removal of particulate matter from the gaseous product stream of an entrained flow coal gasifier which apparatus includes an initial screen, an intermediate screen which is aligned with the direction of flow of the gaseous product stream and a final screen transversely disposed to the flow of gaseous product and which apparatus is capable of withstanding at least a pressure differential of about 10 psi (68.95 kPa) or greater at the temperatures of the gaseous product stream.

Unsteady density-current equations for highly curved terrain

NASA Technical Reports Server (NTRS)

Sivakumaran, N. S.; Dressler, R. F.

1989-01-01

New nonlinear partial differential equations containing terrain curvature and its rate of change are derived that describe the flow of an atmospheric density current. Unlike the classical hydraulic-type equations for density currents, the new equations are valid for two-dimensional, gradually varied flow over highly curved terrain, hence suitable for computing unsteady (or steady) flows over arbitrary mountain/valley profiles. The model assumes the atmosphere above the density current exerts a known arbitrary variable pressure upon the unknown interface. Later this is specialized to the varying hydrostatic pressure of the atmosphere above. The new equations yield the variable velocity distribution, the interface position, and the pressure distribution that contains a centrifugal component, often significantly larger than its hydrostatic component. These partial differential equations are hyperbolic, and the characteristic equations and characteristic directions are derived. Using these to form a characteristic mesh, a hypothetical unsteady curved-flow problem is calculated, not based upon observed data, merely as an example to illustrate the simplicity of their application to unsteady flows over mountains.

Rapid Identification of OXA-48 and OXA-163 Subfamilies in Carbapenem-Resistant Gram-Negative Bacilli with a Novel Immunochromatographic Lateral Flow Assay.

PubMed

Pasteran, Fernando; Denorme, Laurence; Ote, Isabelle; Gomez, Sonia; De Belder, Denise; Glupczynski, Youri; Bogaerts, Pierre; Ghiglione, Barbara; Power, Pablo; Mertens, Pascal; Corso, Alejandra

2016-11-01

We assessed a novel immunochromatographic lateral flow assay for direct identification of OXA-48-like carbapenemases and accurate differentiation of allele variants with distinct substrate profiles (OXA-48 or OXA-163 subfamilies). The assay allowed rapid (less than 4 min) and reliable direct confirmation of OXA-163- and/or OXA-48-like enzymes (with 100% sensitivity and 100% specificity) from cultured colonies that were recovered from both solid medium and spiked blood culture bottles. Copyright © 2016, American Society for Microbiology. All Rights Reserved.

Comparison of different notation for equations of motion of a body in a medium flow

NASA Astrophysics Data System (ADS)

Samsonov, V. A.; Selyutskii, Yu. D.

2008-02-01

In [1-6], a model of a nonstationary action of a medium flow on a body moving in this flow was constructed in the form of an associated dynamical system of second order. In the literature, the representation of the aerodynamic force in integral form with a Duhamel type integral is often used (e.g., see [7, 8]). In the present paper, we pay attention to the fact that a system of ODE is equivalent not to a single integro-differential equation but to a family of such equations. Therefore, it is necessary to discuss the problem of the correspondence between their solutions. The integro-differential representation of the aerodynamic force is reduced to a form convenient to realize the procedure of separation of motions. In this case, we single out the first two approximations with respect to a small parameter. It turns out that in the case of actual airfoils one can speak of "detached" rather than "attached" mass. In the problem on the forced drag of an airfoil in a flow, it is shown that for a sufficiently large acceleration the aerodynamic force can change its direction and turn from a drag force into an "accelerating" force for some time. At the same time, in the case of free drag of a sufficiently light plate, the "acceleration" effect is not observed, but in the course of deceleration the plate moves from it original position in the direction opposite to the initial direction of motion.

Differential rotation in solar-like stars from global simulations

DOE Office of Scientific and Technical Information (OSTI.GOV)

Guerrero, G.; Kosovichev, A. G.; Smolarkiewicz, P. K.

2013-12-20

To explore the physics of large-scale flows in solar-like stars, we perform three-dimensional anelastic simulations of rotating convection for global models with stratification resembling the solar interior. The numerical method is based on an implicit large-eddy simulation approach designed to capture effects from non-resolved small scales. We obtain two regimes of differential rotation, with equatorial zonal flows accelerated either in the direction of rotation (solar-like) or in the opposite direction (anti-solar). While the models with the solar-like differential rotation tend to produce multiple cells of meridional circulation, the models with anti-solar differential rotation result in only one or two meridionalmore » cells. Our simulations indicate that the rotation and large-scale flow patterns critically depend on the ratio between buoyancy and Coriolis forces. By including a sub-adiabatic layer at the bottom of the domain, corresponding to the stratification of a radiative zone, we reproduce a layer of strong radial shear similar to the solar tachocline. Similarly, enhanced super-adiabaticity at the top results in a near-surface shear layer located mainly at lower latitudes. The models reveal a latitudinal entropy gradient localized at the base of the convection zone and in the stable region, which, however, does not propagate across the convection zone. In consequence, baroclinicity effects remain small, and the rotation isocontours align in cylinders along the rotation axis. Our results confirm the alignment of large convective cells along the rotation axis in the deep convection zone and suggest that such 'banana-cell' pattern can be hidden beneath the supergranulation layer.« less

Method and apparatus for high-efficiency direct contact condensation

DOEpatents

Bharathan, D.; Parent, Y.; Hassani, A.V.

1999-07-20

A direct contact condenser having a downward vapor flow chamber and an upward vapor flow chamber, wherein each of the vapor flow chambers includes a plurality of cooling liquid supplying pipes and a vapor-liquid contact medium disposed thereunder to facilitate contact and direct heat exchange between the vapor and cooling liquid. The contact medium includes a plurality of sheets arranged to form vertical interleaved channels or passageways for the vapor and cooling liquid streams. The upward vapor flow chamber also includes a second set of cooling liquid supplying pipes disposed beneath the vapor-liquid contact medium which operate intermittently in response to a pressure differential within the upward vapor flow chamber. The condenser further includes separate wells for collecting condensate and cooling liquid from each of the vapor flow chambers. In alternate embodiments, the condenser includes a cross-current flow chamber and an upward flow chamber, a plurality of upward flow chambers, or a single upward flow chamber. The method of use of the direct contact condenser of this invention includes passing a vapor stream sequentially through the downward and upward vapor flow chambers, where the vapor is condensed as a result of heat exchange with the cooling liquid in the contact medium. The concentration of noncondensable gases in the resulting condensate-liquid mixtures can be minimized by controlling the partial pressure of the vapor, which depends in part upon the geometry of the vapor-liquid contact medium. In another aspect of this invention, the physical and chemical performance of a direct contact condenser can be predicted based on the vapor and coolant compositions, the condensation conditions, and the geometric properties of the contact medium. 39 figs.

Method and apparatus for high-efficiency direct contact condensation

DOEpatents

Bharathan, Desikan; Parent, Yves; Hassani, A. Vahab

1999-01-01

A direct contact condenser having a downward vapor flow chamber and an upward vapor flow chamber, wherein each of the vapor flow chambers includes a plurality of cooling liquid supplying pipes and a vapor-liquid contact medium disposed thereunder to facilitate contact and direct heat exchange between the vapor and cooling liquid. The contact medium includes a plurality of sheets arranged to form vertical interleaved channels or passageways for the vapor and cooling liquid streams. The upward vapor flow chamber also includes a second set of cooling liquid supplying pipes disposed beneath the vapor-liquid contact medium which operate intermittently in response to a pressure differential within the upward vapor flow chamber. The condenser further includes separate wells for collecting condensate and cooling liquid from each of the vapor flow chambers. In alternate embodiments, the condenser includes a cross-current flow chamber and an upward flow chamber, a plurality of upward flow chambers, or a single upward flow chamber. The method of use of the direct contact condenser of this invention includes passing a vapor stream sequentially through the downward and upward vapor flow chambers, where the vapor is condensed as a result of heat exchange with the cooling liquid in the contact medium. The concentration of noncondensable gases in the resulting condensate-liquid mixtures can be minimized by controlling the partial pressure of the vapor, which depends in part upon the geometry of the vapor-liquid contact medium. In another aspect of this invention, the physical and chemical performance of a direct contact condenser can be predicted based on the vapor and coolant compositions, the condensation conditions. and the geometric properties of the contact medium.

Neuronal differentiation is associated with a redox-regulated increase of copper flow to the secretory pathway

PubMed Central

Hatori, Yuta; Yan, Ye; Schmidt, Katharina; Furukawa, Eri; Hasan, Nesrin M.; Yang, Nan; Liu, Chin-Nung; Sockanathan, Shanthini; Lutsenko, Svetlana

2016-01-01

Brain development requires a fine-tuned copper homoeostasis. Copper deficiency or excess results in severe neuro-pathologies. We demonstrate that upon neuronal differentiation, cellular demand for copper increases, especially within the secretory pathway. Copper flow to this compartment is facilitated through transcriptional and metabolic regulation. Quantitative real-time imaging revealed a gradual change in the oxidation state of cytosolic glutathione upon neuronal differentiation. Transition from a broad range of redox states to a uniformly reducing cytosol facilitates reduction of the copper chaperone Atox1, liberating its metal-binding site. Concomitantly, expression of Atox1 and its partner, a copper transporter ATP7A, is upregulated. These events produce a higher flux of copper through the secretory pathway that balances copper in the cytosol and increases supply of the cofactor to copper-dependent enzymes, expression of which is elevated in differentiated neurons. Direct link between glutathione oxidation and copper compartmentalization allows for rapid metabolic adjustments essential for normal neuronal function. PMID:26879543

Neuronal differentiation is associated with a redox-regulated increase of copper flow to the secretory pathway.

PubMed

Hatori, Yuta; Yan, Ye; Schmidt, Katharina; Furukawa, Eri; Hasan, Nesrin M; Yang, Nan; Liu, Chin-Nung; Sockanathan, Shanthini; Lutsenko, Svetlana

2016-02-16

Brain development requires a fine-tuned copper homoeostasis. Copper deficiency or excess results in severe neuro-pathologies. We demonstrate that upon neuronal differentiation, cellular demand for copper increases, especially within the secretory pathway. Copper flow to this compartment is facilitated through transcriptional and metabolic regulation. Quantitative real-time imaging revealed a gradual change in the oxidation state of cytosolic glutathione upon neuronal differentiation. Transition from a broad range of redox states to a uniformly reducing cytosol facilitates reduction of the copper chaperone Atox1, liberating its metal-binding site. Concomitantly, expression of Atox1 and its partner, a copper transporter ATP7A, is upregulated. These events produce a higher flux of copper through the secretory pathway that balances copper in the cytosol and increases supply of the cofactor to copper-dependent enzymes, expression of which is elevated in differentiated neurons. Direct link between glutathione oxidation and copper compartmentalization allows for rapid metabolic adjustments essential for normal neuronal function.

Boundary layers at the interface of two different shear flows

NASA Astrophysics Data System (ADS)

Weidman, Patrick D.; Wang, C. Y.

2018-05-01

We present solutions for the boundary layer between two uniform shear flows flowing in the same direction. In the upper layer, the flow has shear strength a, fluid density ρ1, and kinematic viscosity ν1, while the lower layer has shear strength b, fluid density ρ2, and kinematic viscosity ν2. Similarity transformations reduce the boundary-layer equations to a pair of ordinary differential equations governed by three dimensionless parameters: the shear strength ratio γ = b/a, the density ratio ρ = ρ2/ρ1, and the viscosity ratio ν = ν2/ν1. Further analysis shows that an affine transformation reduces this multi-parameter problem to a single ordinary differential equation which may be efficiently integrated as an initial-value problem. Solutions of the original boundary-value problem are shown to agree with the initial-value integrations, but additional dual and quadruple solutions are found using this method. We argue on physical grounds and through bifurcation analysis that these additional solutions are not tenable. The present problem is applicable to the trailing edge flow over a thin airfoil with camber.

Supercritical flow past a symmetrical bicircular arc airfoil

NASA Technical Reports Server (NTRS)

Holt, Maurice; Yew, Khoy Chuah

1989-01-01

A numerical scheme is developed for computing steady supercritical flow about symmetrical airfoils, applying it to an ellipse for zero angle of attack. An algorithmic description of this new scheme is presented. Application to a symmetrical bicircular arc airfoil is also proposed. The flow field before the shock is region 1. For transonic flow, singularity can be avoided by integrating the resulting ordinary differential equations away from the body. Region 2 contains the shock which will be located by shock fitting techniques. The shock divides region 2 into supersonic and subsonic regions and there is no singularity problem in this case. The Method of Lines is used in this region and it is advantageous to integrate the resulting ordinary differential equation along the body for shock fitting. Coaxial coordinates have to be used for the bicircular arc airfoil so that boundary values on the airfoil body can be taken with one direction of the coaxial coordinates fixed. To avoid taking boundary values at + or - infinity in the coaxial co-ordinary system, approximate analytical representation of the flow field near the tips of the airfoil is proposed.

Development and applications of algorithms for calculating the transonic flow about harmonically oscillating wings

NASA Technical Reports Server (NTRS)

Ehlers, F. E.; Weatherill, W. H.; Yip, E. L.

1984-01-01

A finite difference method to solve the unsteady transonic flow about harmonically oscillating wings was investigated. The procedure is based on separating the velocity potential into steady and unsteady parts and linearizing the resulting unsteady differential equation for small disturbances. The differential equation for the unsteady velocity potential is linear with spatially varying coefficients and with the time variable eliminated by assuming harmonic motion. An alternating direction implicit procedure was investigated, and a pilot program was developed for both two and three dimensional wings. This program provides a relatively efficient relaxation solution without previously encountered solution instability problems. Pressure distributions for two rectangular wings are calculated. Conjugate gradient techniques were developed for the asymmetric, indefinite problem. The conjugate gradient procedure is evaluated for applications to the unsteady transonic problem. Different equations for the alternating direction procedure are derived using a coordinate transformation for swept and tapered wing planforms. Pressure distributions for swept, untaped wings of vanishing thickness are correlated with linear results for sweep angles up to 45 degrees.

Thalamocortical and corticothalamic pathways differentially contribute to goal-directed behaviors in the rat

PubMed Central

Alcaraz, Fabien; Fresno, Virginie; Marchand, Alain R; Kremer, Eric J; Coutureau, Etienne

2018-01-01

Highly distributed neural circuits are thought to support adaptive decision-making in volatile and complex environments. Notably, the functional interactions between prefrontal and reciprocally connected thalamic nuclei areas may be important when choices are guided by current goal value or action-outcome contingency. We examined the functional involvement of selected thalamocortical and corticothalamic pathways connecting the dorsomedial prefrontal cortex (dmPFC) and the mediodorsal thalamus (MD) in the behaving rat. Using a chemogenetic approach to inhibit projection-defined dmPFC and MD neurons during an instrumental learning task, we show that thalamocortical and corticothalamic pathways differentially support goal attributes. Both pathways participate in adaptation to the current goal value, but only thalamocortical neurons are required to integrate current causal relationships. These data indicate that antiparallel flow of information within thalamocortical circuits may convey qualitatively distinct aspects of adaptive decision-making and highlight the importance of the direction of information flow within neural circuits. PMID:29405119

Differential standard deviation of log-scale intensity based optical coherence tomography angiography.

PubMed

Shi, Weisong; Gao, Wanrong; Chen, Chaoliang; Yang, Victor X D

2017-12-01

In this paper, a differential standard deviation of log-scale intensity (DSDLI) based optical coherence tomography angiography (OCTA) is presented for calculating microvascular images of human skin. The DSDLI algorithm calculates the variance in difference images of two consecutive log-scale intensity based structural images from the same position along depth direction to contrast blood flow. The en face microvascular images were then generated by calculating the standard deviation of the differential log-scale intensities within the specific depth range, resulting in an improvement in spatial resolution and SNR in microvascular images compared to speckle variance OCT and power intensity differential method. The performance of DSDLI was testified by both phantom and in vivo experiments. In in vivo experiments, a self-adaptive sub-pixel image registration algorithm was performed to remove the bulk motion noise, where 2D Fourier transform was utilized to generate new images with spatial interval equal to half of the distance between two pixels in both fast-scanning and depth directions. The SNRs of signals of flowing particles are improved by 7.3 dB and 6.8 dB on average in phantom and in vivo experiments, respectively, while the average spatial resolution of images of in vivo blood vessels is increased by 21%. © 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Self-actuating reactor shutdown system

DOEpatents

Barrus, Donald M.; Brummond, Willian A; Peterson, Leslie F.

1988-01-01

A control system for the automatic or self-actuated shutdown or "scram" of a nuclear reactor. The system is capable of initiating scram insertion by a signal from the plant protection system or by independent action directly sensing reactor conditions of low-flow or over-power. Self-actuation due to a loss of reactor coolant flow results from a decrease of pressure differential between the upper and lower ends of an absorber element. When the force due to this differential falls below the weight of the element, the element will fall by gravitational force to scram the reactor. Self-actuation due to high neutron flux is accomplished via a valve controlled by an electromagnet and a thermionic diode. In a reactor over-power, the diode will be heated to a change of state causing the electromagnet to be shorted thereby actuating the valve which provides the changed flow and pressure conditions required for scramming the absorber element.

Differential Interaction of Platelet-Derived Extracellular Vesicles with Leukocyte Subsets in Human Whole Blood.

PubMed

Weiss, René; Gröger, Marion; Rauscher, Sabine; Fendl, Birgit; Eichhorn, Tanja; Fischer, Michael B; Spittler, Andreas; Weber, Viktoria

2018-04-26

Secretion and exchange of biomolecules via extracellular vesicles (EVs) are crucial mechanisms in intercellular communication, and the roles of EVs in infection, inflammation, or thrombosis have been increasingly recognized. EVs have emerged as central players in immune regulation and can enhance or suppress the immune response, depending on the state of donor and recipient cells. We investigated the interaction of blood cell-derived EVs with leukocyte subpopulations (monocytes and their subsets, granulocytes, B cells, T cells, and NK cells) directly in whole blood using a combination of flow cytometry, imaging flow cytometry, cell sorting, and high resolution confocal microscopy. Platelet-derived EVs constituted the majority of circulating EVs and were preferentially associated with granulocytes and monocytes, while they scarcely interacted with lymphocytes. Further flow cytometric differentiation of monocyte subsets provided clear indications for a preferential association of platelet-derived EVs with intermediate (CD14 ++ CD16 + ) monocytes in whole blood.

Three dimensional rotating flow of Powell-Eyring nanofluid with non-Fourier's heat flux and non-Fick's mass flux theory

NASA Astrophysics Data System (ADS)

Ibrahim, Wubshet

2018-03-01

This article numerically examines three dimensional boundary layer flow of a rotating Powell-Eyring nanofluid. In modeling heat transfer processes, non-Fourier heat flux theory and for mass transfer non-Fick's mass flux theory are employed. This theory is recently re-initiated and it becomes the active research area to resolves some drawback associated with the famous Fourier heat flux and mass flux theory. The mathematical model of the flow problem is a system of non-linear partial differential equations which are obtained using the boundary layer analysis. The non-linear partial differential equations have been transformed into non-linear high order ordinary differential equations using similarity transformation. Employing bvp4c algorithm from matlab software routine, the numerical solution of the transformed ordinary differential equations is obtained. The governing equations are constrained by parameters such as rotation parameter λ , the non-Newtonian parameter N, dimensionless thermal relaxation and concentration relaxation parameters δt and δc . The impacts of these parameters have been discussed thoroughly and illustrated using graphs and tables. The findings show that thermal relaxation time δt reduces the thermal and concentration boundary layer thickness. Further, the results reveal that the rotational parameter λ has the effect of decreasing the velocity boundary layer thickness in both x and y directions. Further examination pinpoints that the skin friction coefficient along x-axis is an increasing and skin friction coefficient along y-axis is a decreasing function of rotation parameter λ . Furthermore, the non-Newtonian fluid parameter N has the characteristic of reducing the amount of local Nusselt numbers -f″ (0) and -g″ (0) both in x and y -directions.

Large-scale photospheric motions determined from granule tracking and helioseismology from SDO/HMI data

NASA Astrophysics Data System (ADS)

Roudier, Th.; Švanda, M.; Ballot, J.; Malherbe, J. M.; Rieutord, M.

2018-04-01

Context. Large-scale flows in the Sun play an important role in the dynamo process linked to the solar cycle. The important large-scale flows are the differential rotation and the meridional circulation with an amplitude of km s-1 and few m s-1, respectively. These flows also have a cycle-related components, namely the torsional oscillations. Aim. Our attempt is to determine large-scale plasma flows on the solar surface by deriving horizontal flow velocities using the techniques of solar granule tracking, dopplergrams, and time-distance helioseismology. Methods: Coherent structure tracking (CST) and time-distance helioseismology were used to investigate the solar differential rotation and meridional circulation at the solar surface on a 30-day HMI/SDO sequence. The influence of a large sunspot on these large-scale flows with a specific 7-day HMI/SDO sequence has been also studied. Results: The large-scale flows measured by the CST on the solar surface and the same flow determined from the same data with the helioseismology in the first 1 Mm below the surface are in good agreement in amplitude and direction. The torsional waves are also located at the same latitudes with amplitude of the same order. We are able to measure the meridional circulation correctly using the CST method with only 3 days of data and after averaging between ± 15° in longitude. Conclusions: We conclude that the combination of CST and Doppler velocities allows us to detect properly the differential solar rotation and also smaller amplitude flows such as the meridional circulation and torsional waves. The results of our methods are in good agreement with helioseismic measurements.

Steady Flow Generated by a Core Oscillating in a Rotating Spherical Cavity

NASA Astrophysics Data System (ADS)

Kozlov, V. G.; Subbotin, S. V.

2018-01-01

Steady flow generated by oscillations of an inner solid core in a fluid-filled rotating spherical cavity is experimentally studied. The core with density less than the fluid density is located near the center of the cavity and is acted upon by a centrifugal force. The gravity field directed perpendicular to the rotation axis leads to a stationary displacement of the core from the rotation axis. As a result, in the frame of reference attached to the cavity, the core performs circular oscillation with frequency equal to the rotation frequency, and its center moves along a circular trajectory in the equatorial plane around the center of the cavity. For the differential rotation of the core to be absent, one of the poles of the core is connected to the nearest pole of the cavity with a torsionally elastic, flexible fishing line. It is found that the oscillation of the core generates axisymmetric azimuthal fluid flow in the cavity which has the form of nested liquid columns rotating with different angular velocities. Comparison with the case of a free oscillating core which performs mean differential rotation suggests the existence of two mechanisms of flow generation (due to the differential rotation of the core in the Ekman layer and due to the oscillation of the core in the oscillating boundary layers).

Microscopic and low Reynolds number flows between two intersecting permeable walls

NASA Astrophysics Data System (ADS)

Egashira, R.; Fujikawa, T.; Yaguchi, H.; Fujikawa, S.

2018-06-01

Two-dimensional Navier–Stokes equations are solved in an analytical way to clarify characteristics of low-Re flows in a microscopic channel consisting of two intersecting permeable walls, the intersection of which is supposed to be a sink or a source. Such flows are, therefore, considered to be an extension of the so-called Jeffery–Hamel flow to the permeable wall case. A set of nonlinear forth-order ordinary differential equations are obtained, and their solutions are sought for the small permeable velocity compared with the main flow one by a perturbation method. The solutions contain the solutions found in the past, such as the flow between two parallel permeable walls studied by Berman and the Jeffery–Hamel flow between the impermeable walls as special cases. Velocity distribution and friction loss in pressure along the main stream are represented in the explicit manner and compared with those of the Jeffery–Hamel flow. Numerical examples show that the wall permeability has a great influence on the friction loss. Furthermore, it is shown that the convergent main flow accompanied with the fluid addition through the walls is inversely directed away from the origin due to the balance of the main flow and the permeable one, while the flow accompanied with fluid suction is just directed toward the origin regardless of conditions.

An analysis of laminar free-convection flow and heat transfer about a flat plate paralled to the direction of the generating body force

NASA Technical Reports Server (NTRS)

Ostrach, Simon

1953-01-01

The free-convection flow and heat transfer (generated by a body force) about a flat plate parallel to the direction of the body force are formally analyzed and the type of flow is found to be dependent on the Grashof number alone. For large Grashof numbers (which are of interest in aeronautics), the flow is of the boundary-layer type and the problem is reduced in a formal manner, which is analogous to Prandtl's forced-flow boundary-layer theory, to the simultaneous solution of two ordinary differential equations subject to the proper boundary conditions. Velocity and temperature distributions for Prandtl numbers of 0.01, 0.72, 0.733, 1, 1, 10, 100, and 1000 are computed, and it is shown that velocities and Nusselt numbers of the order of magnitude of those encountered in forced-convection flows may be obtained in free-convection flows. The theoretical and experimental velocity and temperature distributions are in good agreement. A flow and a heat-transfer parameter, from which the important physical quantities such as shear stress and heat-transfer rate can be computed, are derived as functions of Prandtl number alone.

Method for treating reactive metals in a vacuum furnace

DOEpatents

Hulsey, W.J.

1975-10-28

The invention is directed to a method for reducing the contamination of reactive metal melts in vacuum furnaces due to the presence of residual gaseous contaminants in the furnace atmosphere. This reduction is achieved by injecting a stream of inert gas directly over the metal confined in a substantially closed crucible with the flow of the gas being sufficient to establish a pressure differential between the interior of the crucible and the furnace atmosphere.

Solar Wind Deflection by Mass Loading in the Martian Magnetosheath Based on MAVEN Observations

NASA Astrophysics Data System (ADS)

Dubinin, E.; Fraenz, M.; Pätzold, M.; Halekas, J. S.; Mcfadden, J.; Connerney, J. E. P.; Jakosky, B. M.; Vaisberg, O.; Zelenyi, L.

2018-03-01

Mars Atmosphere and Volatile EvolutioN observations at Mars show clear signatures of the shocked solar wind interaction with the extended oxygen atmosphere and hot corona displayed in a lateral deflection of the magnetosheath flow in the direction opposite to the direction of the solar wind motional electric field. The value of the velocity deflection reaches ˜50 km/s. The occurrence of such deflection is caused by the "Lorentz-type" force due to a differential streaming of the solar wind protons and oxygen ions originating from the extended oxygen corona. The value of the total deceleration of the magnetosheath flow due to mass loading is estimated as ˜40 km/s.

Output characteristics of a series three-port axial piston pump

NASA Astrophysics Data System (ADS)

Zhang, Xiaogang; Quan, Long; Yang, Yang; Wang, Chengbin; Yao, Liwei

2012-05-01

Driving a hydraulic cylinder directly by a closed-loop hydraulic pump is currently a key research area in the field of electro-hydraulic control technology, and it is the most direct means to improve the energy efficiency of an electro-hydraulic control system. So far, this technology has been well applied to the pump-controlled symmetric hydraulic cylinder. However, for the differential cylinder that is widely used in hydraulic technology, satisfactory results have not yet been achieved, due to the asymmetric flow constraint. Therefore, based on the principle of the asymmetric valve controlled asymmetric cylinder in valve controlled cylinder technology, an innovative idea for an asymmetric pump controlled asymmetric cylinder is put forward to address this problem. The scheme proposes to transform the oil suction window of the existing axial piston pump into two series windows. When in use, one window is connected to the rod chamber of the hydraulic cylinder and the other is linked with a low-pressure oil tank. This allows the differential cylinders to be directly controlled by changing the displacement or rotation speed of the pumps. Compared with the loop principle of offsetting the area difference of the differential cylinder through hydraulic valve using existing technology, this method may simplify the circuits and increase the energy efficiency of the system. With the software SimulationX, a hydraulic pump simulation model is set up, which examines the movement characteristics of an individual piston and the compressibility of oil, as well as the flow distribution area as it changes with the rotation angle. The pump structure parameters, especially the size of the unloading groove of the valve plate, are determined through digital simulation. All of the components of the series arranged three distribution-window axial piston pump are designed, based on the simulation analysis of the flow pulse characteristics of the pump, and then the prototype pump is made. The basic characteristics, such as the pressure, flow and noise of the pumps under different rotation speeds, are measured on the test bench. The test results verify the correctness of the principle. The proposed research lays a theoretical foundation for the further development of a new pump-controlled cylinder system.

Application of acoustic doppler current profilers for measuring three-dimensional flow fields and as a surrogate measurement of bedload transport

USGS Publications Warehouse

Conaway, Jeffrey S.

2005-01-01

Acoustic Doppler current profilers (ADCPs) have been in use in the riverine environment for nearly 20 years. Their application primarily has been focused on the measurement of streamflow discharge. ADCPs emit high-frequency sound pulses and receive reflected sound echoes from sediment particles in the water column. The Doppler shift between transmitted and return signals is resolved into a velocity component that is measured in three dimensions by simultaneously transmitting four independent acoustical pulses. To measure the absolute velocity magnitude and direction in the water column, the velocity magnitude and direction of the instrument must also be computed. Typically this is accomplished by ensonifying the streambed with an acoustical pulse that also provides a depth measurement for each of the four acoustic beams. Sediment transport on or near the streambed will bias these measurements and requires external positioning such as a differentially corrected Global Positioning Systems (GPS). Although the influence of hydraulic structures such as spur dikes and bridge piers is typically only measured and described in one or two dimensions, the use of differentially corrected GPS with ADCPs provides a fully three-dimensional measurement of the magnitude and direction of the water column at such structures. The measurement of these flow disturbances in a field setting also captures the natural pulsations of river flow that cannot be easily quantified or modeled by numerical simulations or flumes. Several examples of measured three-dimensional flow conditions at bridge sites throughout Alaska are presented. The bias introduced to the bottom-track measurement is being investigated as a surrogate measurement of bedload transport. By fixing the position of the ADCP for a known period of time the apparent velocity of the streambed at that position can be determined. Initial results and comparison to traditionally measured bedload values are presented. These initial results and those by other researchers are helping to determine a direction for further research of noncontact measurements of sediment transport. Copyright ASCE 2005.

Planar laser imaging of differential molecular diffusion in gas-phase turbulent jets

NASA Astrophysics Data System (ADS)

Brownell, C. J.; Su, L. K.

2008-03-01

Planar laser Rayleigh scattering yields quantitative, two-dimensional measurements of differential diffusion in a turbulent propane-helium jet issuing into air. The jet exit Reynolds number ranges from 1000 to 3000, corresponding to estimated outer-scale Reynolds numbers from 4300 to 13 000. Using a technique originally proposed by Bilger and Dibble [Combust. Sci. Technol. 28, 161 (1982)], the imaging measurements allow direct determination of a normalized scalar difference quantity ξ. For the lower Re, significant differential diffusion develops in the pretransitional portion of the flow. Downstream of the turbulent transition, radial profiles of mean ξ take on a characteristic form, with an excess of the less-diffusive propane on the jet boundary. This characteristic form is independent of Reynolds number, and is thus apparently independent of the degree of differential diffusion in the pretransition range. Evolution of the ξ fields in the turbulent part of the flow is surprisingly consistent with the mixing of conventional scalar quantities. Fluctuation profiles of ξ have a self-similar, bimodal shape for each Re, and power spectra of ξ are monotonically decreasing, with a distinct k-5/3 inertial range. This spectral form is at odds with prior analytical and computational results in isotropic turbulence, which predicted that the spectrum would show a peak intermediate between the diffusive cutoffs of the individual scalars. The discrepancy appears to be due to the forcing applied in the simulations; the differential diffusion in the experiments preferentially develops in the jet near field, so the resulting evolution is more akin to a decay process. This is further emphasized by the observation that the thickness of ξ structures in the jet decreases with downstream distance. The present results indicate that consideration of differential diffusion must account for the details of the flow configuration, particularly the uniformity of turbulence levels. This has important implications for reacting flows, where local laminarization by heat release can be significant.

Numerical simulation of rarefied gas flow through a slit

NASA Technical Reports Server (NTRS)

Keith, Theo G., Jr.; Jeng, Duen-Ren; De Witt, Kenneth J.; Chung, Chan-Hong

1990-01-01

Two different approaches, the finite-difference method coupled with the discrete-ordinate method (FDDO), and the direct-simulation Monte Carlo (DSMC) method, are used in the analysis of the flow of a rarefied gas from one reservoir to another through a two-dimensional slit. The cases considered are for hard vacuum downstream pressure, finite pressure ratios, and isobaric pressure with thermal diffusion, which are not well established in spite of the simplicity of the flow field. In the FDDO analysis, by employing the discrete-ordinate method, the Boltzmann equation simplified by a model collision integral is transformed to a set of partial differential equations which are continuous in physical space but are point functions in molecular velocity space. The set of partial differential equations are solved by means of a finite-difference approximation. In the DSMC analysis, three kinds of collision sampling techniques, the time counter (TC) method, the null collision (NC) method, and the no time counter (NTC) method, are used.

Impact of generalized Fourier's and Fick's laws on MHD 3D second grade nanofluid flow with variable thermal conductivity and convective heat and mass conditions

NASA Astrophysics Data System (ADS)

Ramzan, M.; Bilal, M.; Chung, Jae Dong; Lu, Dian Chen; Farooq, Umer

2017-09-01

A mathematical model has been established to study the magnetohydrodynamic second grade nanofluid flow past a bidirectional stretched surface. The flow is induced by Cattaneo-Christov thermal and concentration diffusion fluxes. Novel characteristics of Brownian motion and thermophoresis are accompanied by temperature dependent thermal conductivity and convective heat and mass boundary conditions. Apposite transformations are betrothed to transform a system of nonlinear partial differential equations to nonlinear ordinary differential equations. Analytic solutions of the obtained nonlinear system are obtained via a convergent method. Graphs are plotted to examine how velocity, temperature, and concentration distributions are affected by varied physical involved parameters. Effects of skin friction coefficients along the x- and y-direction versus various parameters are also shown through graphs and are well debated. Our findings show that velocities along both the x and y axes exhibit a decreasing trend for the Hartmann number. Moreover, temperature and concentration distributions are decreasing functions of thermal and concentration relaxation parameters.

Damage Response in Fluid Flow Networks

NASA Astrophysics Data System (ADS)

Gavrilchenko, Tatyana; Katifori, Eleni

The networks found in biological fluid flow systems such as leaf venation and animal vasculature are characterized by hierarchically nested loops. This structure allows the system to be resilient against fluctuations in the flow of fluid and to be robust against damage. We analytically and computationally investigate how this loopy hierarchy determines the extent of disruption in fluid flow in the vicinity of a damage site. Perturbing the network with the removal of a single edge results in the differential flow as a function of distance from the perturbation decaying as a power law. The power law exponent is generally around -2 in 2D, but we find that it varies due to edge effects, initial edge conductivity, and local topology. We expect that these network flow findings, directly applicable to plant and animal veins, will have analogues in electrical grids, traffic flow and other transport networks.

Mixed Convection Opposing Flow in a Vertical Porous Annulus-Two Temperature Model

NASA Astrophysics Data System (ADS)

Al-Rashed, Abdullah A. AA; J, Salman Ahmed N.; Khaleed, H. M. T.; Yunus Khan, T. M.; NazimAhamed, K. S.

2016-09-01

The opposing flow in a porous medium refers to a condition when the forcing velocity flows in opposite direction to thermal buoyancy obstructing the buoyant force. The present research refers to the effect of opposing flow in a vertical porous annulus embedded with fluid saturated porous medium. The thermal non-equilibrium approach with Darcy modal is considered. The boundary conditions are such that the inner radius is heated with constant temperature Tw the outer radius is maintained at constant temperature Tc. The coupled nonlinear partial differential equations such as momentum equation, energy equation for fluid and energy equation for solid are solved using the finite element method. The opposing flow variation of average Nusselt number with respect to radius ratio Rr, Aspect ratioAr and Radiation parameter Rd for different values of Peclet number Pe are investigated. It is found that the flow behavior is quite different from that of aiding flow.

Research on MEMS sensor in hydraulic system flow detection

NASA Astrophysics Data System (ADS)

Zhang, Hongpeng; Zhang, Yindong; Liu, Dong; Ji, Yulong; Jiang, Jihai; Sun, Yuqing

2011-05-01

With the development of mechatronics technology and fault diagnosis theory, people regard flow information much more than before. Cheap, fast and accurate flow sensors are urgently needed by hydraulic industry. So MEMS sensor, which is small, low cost, well performed and easy to integrate, will surely play an important role in this field. Based on the new method of flow measurement which was put forward by our research group, this paper completed the measurement of flow rate in hydraulic system by setting up the mathematical model, using numerical simulation method and doing physical experiment. Based on viscous fluid flow equations we deduced differential pressure-velocity model of this new sensor and did optimization on parameters. Then, we designed and manufactured the throttle and studied the velocity and pressure field inside the sensor by FLUENT. Also in simulation we get the differential pressure-velocity curve .The model machine was simulated too to direct experiment. In the static experiments we calibrated the MEMS sensing element and built some sample sensors. Then in a hydraulic testing system we compared the sensor signal with a turbine meter. It presented good linearity and could meet general hydraulic system use. Based on the CFD curves, we analyzed the error reasons and made some suggestion to improve. In the dynamic test, we confirmed this sensor can realize high frequency flow detection by a 7 piston-pump.

Research on MEMS sensor in hydraulic system flow detection

NASA Astrophysics Data System (ADS)

Zhang, Hongpeng; Zhang, Yindong; Liu, Dong; Ji, Yulong; Jiang, Jihai; Sun, Yuqing

2010-12-01

With the development of mechatronics technology and fault diagnosis theory, people regard flow information much more than before. Cheap, fast and accurate flow sensors are urgently needed by hydraulic industry. So MEMS sensor, which is small, low cost, well performed and easy to integrate, will surely play an important role in this field. Based on the new method of flow measurement which was put forward by our research group, this paper completed the measurement of flow rate in hydraulic system by setting up the mathematical model, using numerical simulation method and doing physical experiment. Based on viscous fluid flow equations we deduced differential pressure-velocity model of this new sensor and did optimization on parameters. Then, we designed and manufactured the throttle and studied the velocity and pressure field inside the sensor by FLUENT. Also in simulation we get the differential pressure-velocity curve .The model machine was simulated too to direct experiment. In the static experiments we calibrated the MEMS sensing element and built some sample sensors. Then in a hydraulic testing system we compared the sensor signal with a turbine meter. It presented good linearity and could meet general hydraulic system use. Based on the CFD curves, we analyzed the error reasons and made some suggestion to improve. In the dynamic test, we confirmed this sensor can realize high frequency flow detection by a 7 piston-pump.

Steady flow in a rotating sphere with strong precession

NASA Astrophysics Data System (ADS)

Kida, Shigeo

2018-04-01

The steady flow in a rotating sphere is investigated by asymptotic analysis in the limit of strong precession. The whole spherical body is divided into three regions in terms of the flow characteristics: the critical band, which is the close vicinity surrounding the great circle perpendicular to the precession axis, the boundary layer, which is attached to the whole sphere surface and the inviscid region that occupies the majority of the sphere. The analytic expressions, in the leading order of the asymptotic expansion, of the velocity field are obtained in the former two, whereas partial differential equations for the velocity field are derived in the latter, which are solved numerically. This steady flow structure is confirmed by the corresponding direct numerical simulation.

Study of viscous flow about airfoils by the integro-differential method

NASA Technical Reports Server (NTRS)

Wu, J. C.; Sampath, S.

1975-01-01

An integro-differential method was used for numerically solving unsteady incompressible viscous flow problems. A computer program was prepared to solve the problem of an impulsively started 9% thick symmetric Joukowski airfoil at an angle of attack of 15 deg and a Reynolds number of 1000. Some of the results obtained for this problem were discussed and compared with related work completed previously. Two numerical procedures were used, an Alternating Direction Implicit (ADI) method and a Successive Line Relaxation (SLR) method. Generally, the ADI solution agrees well with the SLR solution and with previous results are stations away from the trailing edge. At the trailing edge station, the ADI solution differs substantially from previous results, while the vorticity profiles obtained from the SLR method there are in good qualitative agreement with previous results.

C1-Continuous relative permeability and hybrid upwind discretization of three phase flow in porous media

NASA Astrophysics Data System (ADS)

Lee, S. H.; Efendiev, Y.

2016-10-01

Three-phase flow in a reservoir model has been a major challenge in simulation studies due to slowly convergent iterations in Newton solution of nonlinear transport equations. In this paper, we examine the numerical characteristics of three-phase flow and propose a consistent, "C1-continuous discretization" (to be clarified later) of transport equations that ensures a convergent solution in finite difference approximation. First, we examine three-phase relative permeabilities that are critical in solving nonlinear transport equations. Three-phase relative permeabilities are difficult to measure in the laboratory, and they are often correlated with two-phase relative permeabilities (e.g., oil-gas and water-oil systems). Numerical convergence of non-linear transport equations entails that three-phase relative permeability correlations are a monotonically increasing function of the phase saturation and the consistency conditions of phase transitions are satisfied. The Modified Stone's Method II and the Linear Interpolation Method for three-phase relative permeability are closely examined for their mathematical properties. We show that the Linear Interpolation Method yields C1-continuous three-phase relative permeabilities for smooth solutions if the two phase relative permeabilities are monotonic and continuously differentiable. In the second part of the paper, we extend a Hybrid-Upwinding (HU) method of two-phase flow (Lee, Efendiev and Tchelepi, ADWR 82 (2015) 27-38) to three phase flow. In the HU method, the phase flux is divided into two parts based on the driving forces (in general, it can be divided into several parts): viscous and buoyancy. The viscous-driven and buoyancy-driven fluxes are upwinded differently. Specifically, the viscous flux, which is always co-current, is upwinded based on the direction of the total velocity. The pure buoyancy-induced flux is shown to be only dependent on saturation distributions and counter-current. In three-phase flow, the buoyancy effect can be expressed as a sum of two buoyancy effects from two-phase flows, i.e., oil-water and oil-gas systems. We propose an upwind scheme for the buoyancy flux term from three-phase flow as a sum of two buoyancy terms from two-phase flows. The upwind direction of the buoyancy flux in two phase flow is always fixed such that the heavier fluid goes downward and the lighter fluid goes upward. It is shown that the Implicit Hybrid-Upwinding (IHU) scheme for three-phase flow is locally conservative and produces physically-consistent numerical solutions. As in two phase flow, the primary advantage of the IHU scheme is that the flux of a fluid phase remains continuous and differentiable as the flow regime changes between co-current and counter-current conditions as a function of time, or (Newton) iterations. This is in contrast to the standard phase-potential-based upwinding scheme, in which the overall fractional-flow (flux) function is non-differentiable across the transition between co-current and counter-current flows.

Towards Direct Simulations of Counterflow Flames with Consistent Numerical Differential-Algebraic Boundary Conditions

DTIC Science & Technology

2015-05-18

First, the gov - erning equations of the problem are presented. A detailed discussion on the construction of the initial profile of the flow follows...time from the DoD HPCMP Open Research Systems and JPL/ NASA is gratefully acknowledged. References [1] H. Tsuji, Prog. Energ. Combust.8(2) (1982) 93-119

Direct Determination of the Dependence of the Surface Shear and Dilatational Viscosities on the Thermodynamic State of the Interface: Theoretical Foundations.

PubMed

Lopez; Hirsa

1998-10-01

Recent developments in nonlinear optical techniques for noninvasive probing of a surfactant influenced gas/liquid interface allow for the measurement of the surfactant surface concentration, c, and thus provide new opportunities for the direct determination of its intrinsic viscosities. Here, we present the theoretical foundations, based on the Boussinesq-Scriven surface model without the usual simplification of constant viscosities, for an experimental technique to directly measure the surface shear (µs) and dilatational (kappas) viscosities of a Newtonian interface as functions of the surfactant surface concentration. This ability to directly measure the surfactant concentration permits the use of a simple surface flow for the measurement of the surface viscosities. The requirements are that the interface must be nearly flat, and the flow steady, axisymmetric, and swirling; these flow conditions can be achieved in the deep-channel viscometer driven at relatively fast rates. The tangential stress balance on such an interface leads to two equations; the balance in the azimuthal direction involves only µs and its gradients, and the balance in the radial direction involves both µs and kappas and their gradients. By further exploiting recent developments in laser-based flow measuring techniques, the surface velocities and their gradients which appear in the two equations can be measured directly. The surface tension gradient, which appears in the radial balance equation, is incorporated from the equation of state for the surfactant system and direct measurements of the surfactant surface concentration distribution. The stress balance equations are then ordinary differential equations in the surface viscosities as functions of radial position, which can be readily integrated. Since c is measured as a function of radial position, we then have a direct measurement of µs and kappas as functions of c. Numerical computations of the Navier-Stokes equations are performed to determine the appropriate conditions to achieve the requisite secondary flow. Copyright 1998 Academic Press.

Biomechanical factors contributing to self-organization in seagrass landscapes

USGS Publications Warehouse

Fonseca, M.S.; Koehl, M.A.R.; Kopp, B.S.

2007-01-01

Field observations have revealed that when water flow is consistently from one direction, seagrass shoots align in rows perpendicular to the primary axis of flow direction. In this study, live Zostera marina shoots were arranged either randomly or in rows perpendicular to the flow direction and tested in a seawater flume under unidirectional flow and waves to determine if shoot arrangement: a) influenced flow-induced force on individual shoots, b) differentially altered water flow through the canopy, and c) influenced light interception by the canopy. In addition, blade breaking strength was compared with flow-induced force to determine if changes in shoot arrangement might reduce the potential for damage to shoots. Under unidirectional flow, both current velocity in the canopy and force on shoots were significantly decreased when shoots were arranged in rows as compared to randomly. However, force on shoots was nearly constant with downstream distance, arising from the trade-off of shoot bending and in-canopy flow reduction. The coefficient of drag was higher for randomly-arranged shoots at low velocities (< 30 cm s- 1) but converged rapidly among the two shoot arrangements at higher velocities. Shoots arranged in rows tended to intercept slightly more light than those arranged randomly. Effects of shoot arrangement under waves were less clear, potentially because we did not achieve the proper plant size?row spacing ratio. At this point, we may only suggest that water motion, as opposed to light capture, is the dominant physical mechanism responsible for these shoot arrangements. Following a computation of the Environmental Stress Factor, we concluded that even photosynthetically active blades may be damaged or broken under frequently encountered storm conditions, irrespective of shoot arrangement. We hypothesize that when flow is generally from one direction, seagrass bed patterns over multiple scales of consideration may arise as a cumulative effect of individual shoot self-organization driven by reduced force and drag on the shoots and somewhat improved light capture.

Flow compensating pressure regulator

NASA Technical Reports Server (NTRS)

Baehr, E. F. (Inventor)

1978-01-01

An apparatus for regulating pressure of treatment fluid during ophthalmic procedures is described. Flow sensing and pressure regulating diaphragms are used to modulate a flow control valve. The pressure regulating diaphragm is connected to the flow control valve to urge the valve to an open position due to pressure being applied to the diaphragm by bias means such as a spring. The flow sensing diaphragm is mechanically connected to the flow control valve and urges it to an opened position because of the differential pressure on the diaphragm generated by a flow of incoming treatment fluid through an orifice in the diaphragm. A bypass connection with a variable restriction is connected in parallel relationship to the orifice to provide for adjusting the sensitivity of the flow sensing diaphragm. A multiple lever linkage system is utilized between the center of the second diaphragm and the flow control valve to multiply the force applied to the valve by the other diaphragm and reverse the direction of the force.

Algorithm for Stabilizing a POD-Based Dynamical System

NASA Technical Reports Server (NTRS)

Kalb, Virginia L.

2010-01-01

This algorithm provides a new way to improve the accuracy and asymptotic behavior of a low-dimensional system based on the proper orthogonal decomposition (POD). Given a data set representing the evolution of a system of partial differential equations (PDEs), such as the Navier-Stokes equations for incompressible flow, one may obtain a low-dimensional model in the form of ordinary differential equations (ODEs) that should model the dynamics of the flow. Temporal sampling of the direct numerical simulation of the PDEs produces a spatial time series. The POD extracts the temporal and spatial eigenfunctions of this data set. Truncated to retain only the most energetic modes followed by Galerkin projection of these modes onto the PDEs obtains a dynamical system of ordinary differential equations for the time-dependent behavior of the flow. In practice, the steps leading to this system of ODEs entail numerically computing first-order derivatives of the mean data field and the eigenfunctions, and the computation of many inner products. This is far from a perfect process, and often results in the lack of long-term stability of the system and incorrect asymptotic behavior of the model. This algorithm describes a new stabilization method that utilizes the temporal eigenfunctions to derive correction terms for the coefficients of the dynamical system to significantly reduce these errors.

Flows around bacterial swarms

NASA Astrophysics Data System (ADS)

Dauparas, Justas; Lauga, Eric

2015-11-01

Flagellated bacteria on nutrient-rich substrates can differentiate into a swarming state and move in dense swarms across surfaces. A recent experiment (HC Berg, Harvard University) measured the flow in the fluid around the swarm. A systematic chiral flow was observed in the clockwise direction (when viewed from above) ahead of a E.coli swarm with flow speeds of about 10 μm/s, about 3 times greater than the radial velocity at the edge of the swarm. The working hypothesis is that this flow is due to the flagella of cells stalled at the edge of a colony which extend their flagellar filaments outwards, moving fluid over the virgin agar. In this talk we quantitatively test his hypothesis. We first build an analytical model of the flow induced by a single flagellum in a thin film and then use the model, and its extension to multiple flagella, to compare with experimental measurements.

A Capillary Flow Dynamics-Based Sensing Modality for Direct Environmental Pathogen Monitoring.

PubMed

Klug, Katherine E; Reynolds, Kelly A; Yoon, Jeong-Yeol

2018-04-20

Toward ultra-simple and field-ready biosensors, we demonstrate a novel assay transducer mechanism based on interfacial property changes and capillary flow dynamics in antibody-conjugated submicron particle suspensions. Differential capillary flow is tunable, allowing pathogen quantification as a function of flow rate through a paper-based microfluidic device. Flow models based on interfacial and rheological properties indicate a significant relationship between the flow rate and the interfacial effects caused by target-particle aggregation. This mechanism is demonstrated for assays of Escherichia coli K12 in water samples and Zika virus (ZIKV) in blood serum. These assays achieved very low limits of detection compared with other demonstrated methods (1 log CFU/mL E. coli and 20 pg/mL ZIKV whole virus) with an operating time of 30 s, showing promise for environmental and health monitoring. © 2018 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Unsteady Magnetized Flow and Heat Transfer of a Viscoelastic fluid over a Stretching Surface

NASA Astrophysics Data System (ADS)

Ghosh, Sushil Kumar

2017-12-01

This paper is to study the flow of heated ferro-fluid over a stretching sheet under the influence of magnetic field. The fluid considered in the present investigation is a mixture of blood as well as fluid-dispersed magnetic nano particles and under this context blood is found to be the appropriate choice of viscoelastic, Walter's B fluid. The objective of the present work is to study the effect of various parameters found in the mathematical analysis. Taking into account the blood has zero electrical conductivity, magnetization effect has been considered in the governing equation of the present study with the use of ferro-fluid dynamics principle. By introducing appropriate non-dimensional variables into the governing equations of unsteady two-dimensional flow of viscoelastic fluid with heat transfer are converted to a set of ordinary differential equations with appropriate boundary conditions. Newton's linearization technique has been employed for the solution of non-linear ordinary differential equations. Important results found in the present investigation are the substantial influence of ferro-magnetic parameter, Prandlt number and the parameter associated with the thermal conductivity on the flow and heat transfer. It is observed that the presence of magnetic dipole essentially reduces the flow velocity in the vertical direction and that helps to damage the cancer cells in the tumor region.

Field-effect Flow Control in Polymer Microchannel Networks

NASA Technical Reports Server (NTRS)

Sniadecki, Nathan; Lee, Cheng S.; Beamesderfer, Mike; DeVoe, Don L.

2003-01-01

A new Bio-MEMS electroosmotic flow (EOF) modulator for plastic microchannel networks has been developed. The EOF modulator uses field-effect flow control (FEFC) to adjust the zeta potential at the Parylene C microchannel wall. By setting a differential EOF pumping rate in two of the three microchannels at a T-intersection with EOF modulators, the induced pressure at the intersection generated pumping in the third, field-free microchannel. The EOF modulators are able to change the magnitude and direction of the pressure pumping by inducing either a negative or positive pressure at the intersection. The flow velocity is tracked by neutralized fluorescent microbeads in the microchannels. The proof-of-concept of the EOF modulator described here may be applied to complex plastic ,microchannel networks where individual microchannel flow rates are addressable by localized induced-pressure pumping.

Topology optimization of natural convection: Flow in a differentially heated cavity

NASA Astrophysics Data System (ADS)

Saglietti, Clio; Schlatter, Philipp; Berggren, Martin; Henningson, Dan

2017-11-01

The goal of the present work is to develop methods for optimization of the design of natural convection cooled heat sinks, using resolved simulation of both fluid flow and heat transfer. We rely on mathematical programming techniques combined with direct numerical simulations in order to iteratively update the topology of a solid structure towards optimality, i.e. until the design yielding the best performance is found, while satisfying a specific set of constraints. The investigated test case is a two-dimensional differentially heated cavity, in which the two vertical walls are held at different temperatures. The buoyancy force induces a swirling convective flow around a solid structure, whose topology is optimized to maximize the heat flux through the cavity. We rely on the spectral-element code Nek5000 to compute a high-order accurate solution of the natural convection flow arising from the conjugate heat transfer in the cavity. The laminar, steady-state solution of the problem is evaluated with a time-marching scheme that has an increased convergence rate; the actual iterative optimization is obtained using a steepest-decent algorithm, and the gradients are conveniently computed using the continuous adjoint equations for convective heat transfer.

Transition to chaos of natural convection between two infinite differentially heated vertical plates

NASA Astrophysics Data System (ADS)

Gao, Zhenlan; Sergent, Anne; Podvin, Berengere; Xin, Shihe; Le Quéré, Patrick; Tuckerman, Laurette S.

2013-08-01

Natural convection of air between two infinite vertical differentially heated plates is studied analytically in two dimensions (2D) and numerically in two and three dimensions (3D) for Rayleigh numbers Ra up to 3 times the critical value Rac=5708. The first instability is a supercritical circle pitchfork bifurcation leading to steady 2D corotating rolls. A Ginzburg-Landau equation is derived analytically for the flow around this first bifurcation and compared with results from direct numerical simulation (DNS). In two dimensions, DNS shows that the rolls become unstable via a Hopf bifurcation. As Ra is further increased, the flow becomes quasiperiodic, and then temporally chaotic for a limited range of Rayleigh numbers, beyond which the flow returns to a steady state through a spatial modulation instability. In three dimensions, the rolls instead undergo another pitchfork bifurcation to 3D structures, which consist of transverse rolls connected by counter-rotating vorticity braids. The flow then becomes time dependent through a Hopf bifurcation, as exchanges of energy occur between the rolls and the braids. Chaotic behavior subsequently occurs through two competing mechanisms: a sequence of period-doubling bifurcations leading to intermittency or a spatial pattern modulation reminiscent of the Eckhaus instability.

Role of selection and gene flow in population differentiation at the edge vs. interior of the species range differing in climatic conditions.

PubMed

Volis, S; Ormanbekova, D; Shulgina, I

2016-04-01

Evaluating the relative importance of neutral and adaptive processes as determinants of population differentiation across environments is a central theme of evolutionary biology. We applied the QST-FST comparison flanked by a direct test for local adaptation to infer the role of climate-driven selection and gene flow in population differentiation of an annual grass Avena sterilis in two distinct parts of the species range, edge and interior, which represent two globally different climates, desert and Mediterranean. In a multiyear reciprocal transplant experiment, the plants of desert and Mediterranean origin demonstrated home advantage, and population differentiation in several phenotypic traits related to reproduction exceeded neutral predictions, as determined by comparisons of QST values with theoretical FST distributions. Thus, variation in these traits likely resulted from local adaptation to desert and Mediterranean environments. The two separate common garden experiments conducted with different experimental design revealed that two population comparisons, in contrast to multi-population comparisons, are likely to detect population differences in virtually every trait, but many of these differences reflect effects of local rather than regional environment. We detected a general reduction in neutral (SSR) genetic variation but not in adaptive quantitative trait variation in peripheral desert as compared with Mediterranean core populations. On the other hand, the molecular data indicated intensive gene flow from the Mediterranean core towards desert periphery. Although species range position in our study (edge vs. interior) was confounded with climate (desert vs. Mediterranean), the results suggest that the gene flow from the species core does not have negative consequences for either performance of the peripheral plants or their adaptive potential. © 2016 John Wiley & Sons Ltd.

Isolated populations of a rare alpine plant show high genetic diversity and considerable population differentiation.

PubMed

Aegisdóttir, Hafdís Hanna; Kuss, Patrick; Stöcklin, Jürg

2009-12-01

Gene flow and genetic variability within and among alpine plant populations can be greatly influenced by the steep environmental gradients and heterogeneous topography of alpine landscapes. In this study, the effects are examined of natural isolation of alpine habitats on genetic diversity and geographic structure in populations of C. thyrsoides, a rare and isolated European Alpine monocarpic perennial with limited seed dispersal capacity. Molecular diversity was analysed for 736 individuals from 32 populations in the Swiss Alps and adjacent Jura mountains using five polymorphic microsatellite loci. Pollen flow was estimated using pollen grain-sized fluorescent powder. In addition, individual-based Bayesian approaches were applied to examine population structure. High within-population genetic diversity (H(E) = 0.76) and a relatively low inbreeding coefficient (F(IS) = 0.022) were found. Genetic differentiation among populations measured with a standardized measure was considerable (G'(ST) = 0.53). A significant isolation-by-distance relationship was found (r = 0.62, P < 0.001) and a significant geographic sub-structure, coinciding with proposed postglacial migration patterns. Altitudinal location and size of populations did not influence molecular variation. Direct measures of pollen flow revealed that insect-mediated pollen dispersal was restricted to short distances within a population. The natural isolation of suitable habitats for C. thyrsoides restricts gene flow among the populations as expected for a monocarpic species with very limited seed dispersal capacities. The observed high within-population genetic diversity in this rare monocarpic perennial is best explained by its outcrossing behaviour, long-lived individuals and overlapping generations. Despite the high within-population genetic diversity, the considerable genetic differentiation and the clear western-eastern differentiation in this species merits consideration in future conservation efforts.

Direct modeling for computational fluid dynamics

NASA Astrophysics Data System (ADS)

Xu, Kun

2015-06-01

All fluid dynamic equations are valid under their modeling scales, such as the particle mean free path and mean collision time scale of the Boltzmann equation and the hydrodynamic scale of the Navier-Stokes (NS) equations. The current computational fluid dynamics (CFD) focuses on the numerical solution of partial differential equations (PDEs), and its aim is to get the accurate solution of these governing equations. Under such a CFD practice, it is hard to develop a unified scheme that covers flow physics from kinetic to hydrodynamic scales continuously because there is no such governing equation which could make a smooth transition from the Boltzmann to the NS modeling. The study of fluid dynamics needs to go beyond the traditional numerical partial differential equations. The emerging engineering applications, such as air-vehicle design for near-space flight and flow and heat transfer in micro-devices, do require further expansion of the concept of gas dynamics to a larger domain of physical reality, rather than the traditional distinguishable governing equations. At the current stage, the non-equilibrium flow physics has not yet been well explored or clearly understood due to the lack of appropriate tools. Unfortunately, under the current numerical PDE approach, it is hard to develop such a meaningful tool due to the absence of valid PDEs. In order to construct multiscale and multiphysics simulation methods similar to the modeling process of constructing the Boltzmann or the NS governing equations, the development of a numerical algorithm should be based on the first principle of physical modeling. In this paper, instead of following the traditional numerical PDE path, we introduce direct modeling as a principle for CFD algorithm development. Since all computations are conducted in a discretized space with limited cell resolution, the flow physics to be modeled has to be done in the mesh size and time step scales. Here, the CFD is more or less a direct construction of discrete numerical evolution equations, where the mesh size and time step will play dynamic roles in the modeling process. With the variation of the ratio between mesh size and local particle mean free path, the scheme will capture flow physics from the kinetic particle transport and collision to the hydrodynamic wave propagation. Based on the direct modeling, a continuous dynamics of flow motion will be captured in the unified gas-kinetic scheme. This scheme can be faithfully used to study the unexplored non-equilibrium flow physics in the transition regime.

[Venous Doppler color echography: importance and inconveniences].

PubMed

Laroche, J P; Dauzat, M; Muller, G; Janbon, C

1993-01-01

Color Doppler is a technique which performs a real-time opacification of the vascular system with blue indicating reverse flow and red indicating forward flow (directional color coding). In venous pathology, the use of color Doppler improves significantly the anatomical evaluation of the inferior vena cava, the iliac vein, the deep femoral vein, and the sural system. Color Doppler facilitates the study of deep venous thrombosis (providing useful information to differentiate ancient from most recent thrombus) and also the study of post-thrombotic conditions (assessment of reverse flow, repermeation phenomena). Finally, color Doppler produces a better insight for the study of varicose veins, especially with regard to mapping, identification of communicante veins, and study of the external saphenous vein.

Surface-acoustic-wave (SAW) flow sensor

NASA Astrophysics Data System (ADS)

Joshi, Shrinivas G.

1991-03-01

The use of a surface-acoustic-wave (SAW) device to measure the rate of gas flow is described. A SAW oscillator heated to a suitable temperature above ambient is placed in the path of a flowing gas. Convective cooling caused by the gas flow results in a change in the oscillator frequency. A 73-MHz oscillator fabricated on 128 deg rotated Y-cut lithium niobate substrate and heated to 55 C above ambient shows a frequency variation greater than 142 kHz for flow-rate variation from 0 to 1000 cu cm/min. The output of the sensor can be calibrated to provide a measurement of volume flow rate, pressure differential across channel ports, or mass flow rate. High sensitivity, wide dynamic range, and direct digital output are among the attractive features of this sensor. Theoretical expressions for the sensitivity and response time of the sensor are derived. It is shown that by using ultrasonic Lamb waves propagating in thin membranes, a flow sensor with faster response than a SAW sensor can be realized.

Surface-acoustic-wave (SAW) flow sensor.

PubMed

Joshi, S G

1991-01-01

The use of a surface-acoustic-wave (SAW) device to measure the rate of gas flow is described. A SAW oscillator heated to a suitable temperature above ambient is placed in the path of a flowing gas. Convective cooling caused by the gas flow results in a change in the oscillator frequency. A 73-MHz oscillator fabricated on 128 degrees rotated Y-cut lithium niobate substrate and heated to 55 degrees C above ambient shows a frequency variation greater than 142 kHz for flow-rate variation from 0 to 1000 cm(3)/min. The output of the sensor can be calibrated to provide a measurement of volume flow rate, pressure differential across channel ports, or mass flow rate. High sensitivity, wide dynamic range, and direct digital output are among the attractive features of this sensor. Theoretical expressions for the sensitivity and response time of the sensor are derived. It is shown that by using ultrasonic Lamb waves, propagating in thin membranes, a flow sensor with faster response than a SAW sensor can be realized.

Mechanisms of Amplified Arteriogenesis in Collateral Artery Segments Exposed to Flow Direction Reversal

PubMed Central

Heuslein, Joshua L.; Meisner, Joshua K.; Li, Xuanyue; Song, Ji; Vincentelli, Helena; Leiphart, Ryan J.; Ames, Elizabeth G.; Price, Richard J.

2015-01-01

Objective Collateral arteriogenesis, the growth of existing arterial vessels to a larger diameter, is a fundamental adaptive response that is often critical for the perfusion and survival of tissues downstream of chronic arterial occlusion(s). Shear stress regulates arteriogenesis; however, the arteriogenic significance of flow direction reversal, occurring in numerous collateral artery segments after femoral artery ligation (FAL), is unknown. Our objective was to determine if flow direction reversal in collateral artery segments differentially regulates endothelial cell signaling and arteriogenesis. Approach and Results Collateral segments experiencing flow reversal after FAL in C57BL/6 mice exhibit increased pericollateral macrophage recruitment, amplified arteriogenesis (30% diameter and 2.8-fold conductance increases), and remarkably permanent (12 weeks post-FAL) remodeling. Genome-wide transcriptional analyses on HUVECs exposed to flow reversal conditions mimicking those occurring in-vivo yielded 10-fold more significantly regulated transcripts, as well as enhanced activation of upstream regulators (NFκB, VEGF, FGF2, TGFβ) and arteriogenic canonical pathways (PKA, PDE, MAPK). Augmented expression of key pro-arteriogenic molecules (KLF2, ICAM-1, eNOS) was also verified by qRT-PCR, leading us to test whether ICAM-1 and/or eNOS regulate amplified arteriogenesis in flow-reversed collateral segments in-vivo. Interestingly, enhanced pericollateral macrophage recruitment and amplified arteriogenesis was attenuated in flow-reversed collateral segments after FAL in ICAM-1−/− mice; however, eNOS−/− mice showed no such differences. Conclusions Flow reversal leads to a broad amplification of pro-arteriogenic endothelial signaling and a sustained ICAM-1-dependent augmentation of arteriogenesis. Further investigation of the endothelial mechanotransduction pathways activated by flow reversal may lead to more effective and durable therapeutic options for arterial occlusive diseases. PMID:26338297

Particle Streak Anemometry: A New Method for Proximal Flow Sensing from Aircraft

NASA Astrophysics Data System (ADS)

Nichols, T. W.

Accurate sensing of relative air flow direction from fixed-wing small unmanned aircraft (sUAS) is challenging with existing multi-hole pitot-static and vane systems. Sub-degree direction accuracy is generally not available on such systems and disturbances to the local flow field, induced by the airframe, introduce an additional error source. An optical imaging approach to make a relative air velocity measurement with high-directional accuracy is presented. Optical methods offer the capability to make a proximal measurement in undisturbed air outside of the local flow field without the need to place sensors on vulnerable probes extended ahead of the aircraft. Current imaging flow analysis techniques for laboratory use rely on relatively thin imaged volumes and sophisticated hardware and intensity thresholding in low-background conditions. A new method is derived and assessed using a particle streak imaging technique that can be implemented with low-cost commercial cameras and illumination systems, and can function in imaged volumes of arbitrary depth with complex background signal. The new technique, referred to as particle streak anemometry (PSA) (to differentiate from particle streak velocimetry which makes a field measurement rather than a single bulk flow measurement) utilizes a modified Canny Edge detection algorithm with a connected component analysis and principle component analysis to detect streak ends in complex imaging conditions. A linear solution for the air velocity direction is then implemented with a random sample consensus (RANSAC) solution approach. A single DOF non-linear, non-convex optimization problem is then solved for the air speed through an iterative approach. The technique was tested through simulation and wind tunnel tests yielding angular accuracies under 0.2 degrees, superior to the performance of existing commercial systems. Air speed error standard deviations varied from 1.6 to 2.2 m/s depending on the techniques of implementation. While air speed sensing is secondary to accurate flow direction measurement, the air speed results were in line with commercial pitot static systems at low speeds.

Noniterative three-dimensional grid generation using parabolic partial differential equations

NASA Technical Reports Server (NTRS)

Edwards, T. A.

1985-01-01

A new algorithm for generating three-dimensional grids has been developed and implemented which numerically solves a parabolic partial differential equation (PDE). The solution procedure marches outward in two coordinate directions, and requires inversion of a scalar tridiagonal system in the third. Source terms have been introduced to control the spacing and angle of grid lines near the grid boundaries, and to control the outer boundary point distribution. The method has been found to generate grids about 100 times faster than comparable grids generated via solution of elliptic PDEs, and produces smooth grids for finite-difference flow calculations.

Linear and nonlinear stability of the Blasius boundary layer

NASA Technical Reports Server (NTRS)

Bertolotti, F. P.; Herbert, TH.; Spalart, P. R.

1992-01-01

Two new techniques for the study of the linear and nonlinear instability in growing boundary layers are presented. The first technique employs partial differential equations of parabolic type exploiting the slow change of the mean flow, disturbance velocity profiles, wavelengths, and growth rates in the streamwise direction. The second technique solves the Navier-Stokes equation for spatially evolving disturbances using buffer zones adjacent to the inflow and outflow boundaries. Results of both techniques are in excellent agreement. The linear and nonlinear development of Tollmien-Schlichting (TS) waves in the Blasius boundary layer is investigated with both techniques and with a local procedure based on a system of ordinary differential equations. The results are compared with previous work and the effects of non-parallelism and nonlinearity are clarified. The effect of nonparallelism is confirmed to be weak and, consequently, not responsible for the discrepancies between measurements and theoretical results for parallel flow.

Numerical analysis of MHD Casson Navier's slip nanofluid flow yield by rigid rotating disk

NASA Astrophysics Data System (ADS)

Rehman, Khalil Ur; Malik, M. Y.; Zahri, Mostafa; Tahir, M.

2018-03-01

An exertion is perform to report analysis on Casson liquid equipped above the rigid disk for z bar > 0 as a semi-infinite region. The flow of Casson liquid is achieve through rotation of rigid disk with constant angular frequency Ω bar . Magnetic interaction is consider by applying uniform magnetic field normal to the axial direction. The nanosized particles are suspended in the Casson liquid and rotation of disk is manifested with Navier's slip condition, heat generation/absorption and chemical reaction effects. The obtain flow narrating differential equations subject to MHD Casson nanofluid are transformed into ordinary differential system. For this purpose the Von Karman way of scheme is executed. To achieve accurate trends a computational algorithm is develop rather than to go on with usual build-in scheme. The effects logs of involved parameters, namely magnetic field parameter, Casson fluid parameter, slip parameter, thermophoresis and Brownian motion parameters on radial, tangential velocities, temperature, nanoparticles concentration, Nusselt and Sherwood numbers are provided by means of graphical and tabular structures. It is observed that both tangential and radial velocities are decreasing function of Casson fluid parameter.

Electrical Polarization of Titanium Surfaces for the Enhancement of Osteoblast Differentiation

PubMed Central

Gittens, Rolando A.; Olivares-Navarrete, Rene; Rettew, Robert; Butera, Robert J.; Alamgir, Faisal M.; Boyan, Barbara D.; Schwartz, Zvi

2014-01-01

Electrical stimulation has been used clinically to promote bone regeneration in cases of fractures with delayed union or nonunion, with several in vitro and in vivo reports suggesting its beneficial effects on bone formation. However, the use of electrical stimulation of titanium (Ti) implants to enhance osseointegration is less understood, in part because of the few in vitro models that attempt to represent the in vivo environment. In this article, the design of a new in vitro system that allows direct electrical stimulation of osteoblasts through their Ti substrates without the flow of exogenous currents through the media is presented, and the effect of applied electrical polarization on osteoblast differentiation and local factor production was evaluated. A custom-made polycarbonate tissue culture plate was designed to allow electrical connections directly underneath Ti disks placed inside the wells, which were supplied with electrical polarization ranging from 100 to 500 mV to stimulate MG63 osteoblasts. Our results show that electrical polarization applied directly through Ti substrates on which the cells are growing in the absence of applied electrical currents may increase osteoblast differentiation and local factor production in a voltage-dependent manner. PMID:23996899

Directing adult human periodontal ligament-derived stem cells to retinal fate.

PubMed

Huang, Li; Liang, Jiajian; Geng, Yiqun; Tsang, Wai-Ming; Yao, Xiaowu; Jhanji, Vishal; Zhang, Mingzhi; Cheung, Herman S; Pang, Chi Pui; Yam, Gary Hin-Fai

2013-06-06

To investigate the retinal fate competence of human postnatal periodontal ligament (PDL)-derived stem cells (PDLSC) through a directed differentiation mimicking mammalian retinogenesis. Human teeth were collected from healthy subjects younger than 35 years old. Primary PDLSC were isolated by collagenase digestion and cultivated. PDLSC at passage 3 were cultured in the induction media containing Noggin (antagonist of bone morphogenic protein) and Dkk-1 (antagonist of Wnt/β-catenin signaling). Gene expression of neural crest cells, retinal progenitors, and retinal neurons, including photoreceptors, was revealed by RNA analyses, immunofluorescence, and flow cytometry. The neuronal-like property of differentiated cells in response to excitatory glutamate was examined by fluo-4-acetoxymethyl calcium imaging assay. Primary human PDLSC stably expressed marker genes for neural crest (Notch1, BMP2, Slug, Snail, nestin, and Tuj1), mesenchymal stem cell (CD44, CD90, and vimentin), and embryonic stem cell (c-Myc, Klf4, Nanog, and SSEA4). Under low attachment culture, PDLSC generated neurospheres expressing nestin, p75/NGFR, Pax6, and Tuj1 (markers of neural progenitors). When neurospheres were plated on Matrigel-coated surface, they exhibited rosette-like outgrowth. They expressed eye field transcription factors (Pax6, Rx, Lhx, Otx2). By flow cytometry, 94% of cells were Pax6(nuclear)Rx(+), indicative of retinal progenitors. At prolonged induction, they expressed photoreceptor markers (Nrl, rhodopsin and its kinase) and showed significant responsiveness to excitatory glutamate. Primary human PDLSC could be directed to retinal progenitors with competence for photoreceptor differentiation. Human neural crest-derived PDL is readily accessible and can be an ample autologous source of undifferentiated cells for retinal cell regeneration.

Active heat pulse sensing of 3-D-flow fields in streambeds

NASA Astrophysics Data System (ADS)

Banks, Eddie W.; Shanafield, Margaret A.; Noorduijn, Saskia; McCallum, James; Lewandowski, Jörg; Batelaan, Okke

2018-03-01

Profiles of temperature time series are commonly used to determine hyporheic flow patterns and hydraulic dynamics in the streambed sediments. Although hyporheic flows are 3-D, past research has focused on determining the magnitude of the vertical flow component and how this varies spatially. This study used a portable 56-sensor, 3-D temperature array with three heat pulse sources to measure the flow direction and magnitude up to 200 mm below the water-sediment interface. Short, 1 min heat pulses were injected at one of the three heat sources and the temperature response was monitored over a period of 30 min. Breakthrough curves from each of the sensors were analysed using a heat transport equation. Parameter estimation and uncertainty analysis was undertaken using the differential evolution adaptive metropolis (DREAM) algorithm, an adaption of the Markov chain Monte Carlo method, to estimate the flux and its orientation. Measurements were conducted in the field and in a sand tank under an extensive range of controlled hydraulic conditions to validate the method. The use of short-duration heat pulses provided a rapid, accurate assessment technique for determining dynamic and multi-directional flow patterns in the hyporheic zone and is a basis for improved understanding of biogeochemical processes at the water-streambed interface.

Partial-depth lock-release flows

NASA Astrophysics Data System (ADS)

Khodkar, M. A.; Nasr-Azadani, M. M.; Meiburg, E.

2017-06-01

We extend the vorticity-based modeling concept for stratified flows introduced by Borden and Meiburg [Z. Borden and E. Meiburg, J. Fluid Mech. 726, R1 (2013), 10.1017/jfm.2013.239] to unsteady flow fields that cannot be rendered quasisteady by a change of reference frames. Towards this end, we formulate a differential control volume balance for the conservation of mass and vorticity in the fully unsteady parts of the flow, which we refer to as the differential vorticity model. We furthermore show that with the additional assumptions of locally uniform parallel flow within each layer, the unsteady vorticity modeling approach reproduces the familiar two-layer shallow-water equations. To evaluate its accuracy, we then apply the vorticity model approach to partial-depth lock-release flows. Consistent with the shallow water analysis of Rottman and Simpson [J. W. Rottman and J. E. Simpson, J. Fluid Mech. 135, 95 (1983), 10.1017/S0022112083002979], the vorticity model demonstrates the formation of a quasisteady gravity current front, a fully unsteady expansion wave, and a propagating bore that is present only if the lock depth exceeds half the channel height. When this bore forms, it travels with a velocity that does not depend on the lock height and the interface behind it is always at half the channel depth. We demonstrate that such a bore is energy conserving. The differential vorticity model gives predictions for the height and velocity of the gravity current and the bore, as well as for the propagation velocities of the edges of the expansion fan, as a function of the lock height. All of these predictions are seen to be in good agreement with the direct numerical simulation data and, where available, with experimental results. An energy analysis shows lock-release flows to be energy conserving only for the case of a full lock, whereas they are always dissipative for partial-depth locks.

The bridge permeameter; An alternative method for single-phase, steady-state permeability measurements

DOE Office of Scientific and Technical Information (OSTI.GOV)

Graf, D.C.; Warpinski, N.R.

Laboratory measurements of single-phase, steady-state permeability of porous rock are important for a number of different applications. The oil and gas industry uses permeability data as a key indicator of the producability of a hydrocarbon reservoir; effective containment of large volumes of oil in underground salt caverns is directly dependent upon the permeability of the adjacent cavern walls; and safe, long term underground isolation of radioactive and hazardous waste is contingent upon the flow and transport characteristics of the surrounding geologic formations. An alternative method for measuring single-phase, steady-state permeability of porous rock is presented. The use of troublesome andmore » expensive mass flow meters is eliminated and replaced with a bridge configuration of flow resistors. Permeability values can be determined directly from differential pressures across the bridge network, resulting in potentially significant cost savings and simplification for conducting these types of measurements. Results from the bridge permeameter are compared with results obtained using conventional methods.« less

Calculation of the flow field including boundary layer effects for supersonic mixed compression inlets at angles of attack

NASA Technical Reports Server (NTRS)

Vadyak, J.; Hoffman, J. D.

1982-01-01

The flow field in supersonic mixed compression aircraft inlets at angle of attack is calculated. A zonal modeling technique is employed to obtain the solution which divides the flow field into different computational regions. The computational regions consist of a supersonic core flow, boundary layer flows adjacent to both the forebody/centerbody and cowl contours, and flow in the shock wave boundary layer interaction regions. The zonal modeling analysis is described and some computational results are presented. The governing equations for the supersonic core flow form a hyperbolic system of partial differential equations. The equations for the characteristic surfaces and the compatibility equations applicable along these surfaces are derived. The characteristic surfaces are the stream surfaces, which are surfaces composed of streamlines, and the wave surfaces, which are surfaces tangent to a Mach conoid. The compatibility equations are expressed as directional derivatives along streamlines and bicharacteristics, which are the lines of tangency between a wave surface and a Mach conoid.

Numerical study of magnetohydrodynamic pulsatile flow of Sutterby fluid through an inclined overlapping arterial stenosis in the presence of periodic body acceleration

NASA Astrophysics Data System (ADS)

Abbas, Z.; Shabbir, M. S.; Ali, N.

2018-06-01

In the present theoretical investigation, we have numerically simulated the problem of blood flow through an overlapping stenosed arterial blood vessel under the action of externally applied body acceleration and the periodic pressure gradient. The rheology of blood is characterized by the Sutterby fluid model. The blood is considered as an electrically conducting fluid. A steady uniform magnetic field is applied in the radial direction of the blood vessel. The governing nonlinear partial differential equations of the present flow together with prescribed boundary conditions are solved by employing explicit finite difference scheme. Results concerning the temporal distribution of velocity, flow rate, shear stress and resistance to the flow are displayed through graphs. The effects of various emerging parameters on the flow variables are analyzed and discussed in detail. The analysis reveals that the applied magnetic field and periodic body acceleration have considerable effects on the flow field.

Unraveling the Complexity of the Evolution of the Sun's Photospheric Magnetic Field

NASA Astrophysics Data System (ADS)

Hathaway, David H.

2016-10-01

Given the emergence of tilted, bipolar active regions, surface flux transport has been shown to reproduce much of the complex evolution of the Sun's photospheric magnetic field. Surface flux is transported by flows in the surface shear layer - the axisymmetric differential rotation and meridional flow and the non-axisymmetric convective motions (granules, supergranules, and giant cells). We have measured these flows by correlation tracking of the magnetic elements themselves, correlation tracking of the Doppler features (supergranules), and by direct Doppler measurements using SDO/HMI data. These measurements fully constrain (with no free parameters) the flows used in our surface flux transport code - the Advective Flux Transport or AFT code. Here we show the up-to-date evolution of these flows, their impact on the detailed evolution of the Sun's photospheric magnetic field, and predictions for what the polar fields will be at the next minimum in 2020.

High-definition flow Doppler ultrasonographic technique to assess hepatic vasculature compared with color or power Doppler ultrasonography: preliminary experience.

PubMed

Kim, Se Hyung; Lee, Jeong Min; Kim, Young Jun; Lee, Jae Young; Han, Joon Koo; Choi, Byung Ihn

2008-10-01

The purpose of this study was to introduce a new high-definition flow (HDF) Doppler technique and to compare its performance with those of color Doppler ultrasonography (CDU) and power Doppler ultrasonography (PDU) for assessment of hepatic vasculature in native and transplanted livers. High-definition flow was invented as a high-resolution bidirectional PDU technique. We obtained CDU, PDU, and HDF images of the hepatic artery (HA), portal vein (PV), and hepatic vein from 60 patients. They were divided into 2 groups: a liver transplantation group (group 1, n = 10) and a native liver group (group 2, n = 50). Two radiologists independently reviewed the cine images and graded them using a 4-point scale in terms of the clarity of the vessel margin and degree of depiction of the HA, flow filling, and flash artifacts. The degree of differentiation between the HA and PV was also evaluated. Flow directionality was recorded, and interobserver agreement was finally analyzed. Moderate to almost perfect agreement was achieved between radiologists for all parameters of each ultrasonographic technique. High-definition flow was significantly superior to both CDU and PDU with respect to all analyzed items except the degree of flash artifacts (P < .05). With regard to flash artifacts, CDU was significantly better than either PDU or HDF. High-definition flow provided directional information, as did CDU. The HDF technique provides better resolution for depicting hepatic vessels as well as their margins with less blooming compared with conventional Doppler ultrasonography in both native and transplanted liver. It also provides solid directional flow information. One point of concern, however, is the frequency of flash artifacts compared with that on CDU.

The differentiation of hepatocyte-like cells from monkey embryonic stem cells.

PubMed

Ma, Xiaocui; Duan, Yuyou; Jung, Christine J; Wu, Jian; VandeVoort, Catherine A; Zern, Mark A

2008-12-01

Embryonic stem cells (ESC) hold great potential for the treatment of liver diseases. Here, we report the differentiation of rhesus macaque ESC along a hepatocyte lineage. The undifferentiated monkey ESC line, ORMES-6, was cultured in an optimal culture condition in an effort to differentiate them into hepatocyte-like cells in vitro. The functional efficacy of the differentiated hepatic cells was evaluated using RT-PCR for the expression of hepatocyte specific genes, and Western blot analysis and immunocytochemistry for hepatic proteins such as alpha-fetoprotein (AFP), albumin and alpha1-antitrypsin (alpha1-AT). Functional assays were performed using the periodic acid schiff (PAS) reaction and ELISA. The final yield of ESC-derived hepatocyte-like cells was measured by flow cytometry for cells that were transduced with a liver-specific lentivirus vector containing the alpha1-AT promoter driving the expression of green fluorescence protein (GFP). The treatment of monkey ESC with an optimal culture condition yielded hepatocyte-like cells that expressed albumin, alpha1-AT, AFP, hepatocyte nuclear factor 3beta, glucose-6-phophatase, and cytochrome P450 genes and proteins as determined by RT-PCR and Western blot analysis. Immunofluorescent staining showed the cells positive for albumin, AFP, and alpha1-AT. PAS staining demonstrated that the differentiated cells showed hepatocyte functional activity. Albumin could be detected in the medium after 20 days of differentiation. Flow cytometry data showed that 6.5 +/- 1.0% of the total differentiated cells were positive for GFP. These results suggest that by using a specific, empirically determined, culture condition, we were able to direct monkey ESC toward a hepatocyte lineage.

System for measuring multiphase flow using multiple pressure differentials

DOEpatents

Fincke, James R.

2003-01-01

An improved method and system for measuring a multi-phase flow in a pressure flow meter. An extended throat venturi is used and pressure of the multi-phase flow is measured at three or more positions in the venturi, which define two or more pressure differentials in the flow conduit. The differential pressures are then used to calculate the mass flow of the gas phase, the total mass flow, and the liquid phase. The system for determining the mass flow of the high void fraction fluid flow and the gas flow includes taking into account a pressure drop experienced by the gas phase due to work performed by the gas phase in accelerating the liquid phase.

Direct evidence of macrophage differentiation from bone marrow cells in the liver: a possible origin of Kupffer cells.

PubMed

Takezawa, R; Watanabe, Y; Akaike, T

1995-12-01

Controversy has surrounded origin and differentiation of tissue macrophages. We directly demonstrate the differentiation of bone marrow cells into macrophages in the liver in vivo using a cell-labeling fluorescence dye, PKH-26. Bone marrow cells labeled with PKH26 were intravenously injected into syngenic mice, and these cells were tracked by flow cytometric analysis. The majority of the labeled cells were detected only in the liver after 4 days. Interestingly, antigens specific for macrophage lineage cells (F4/80, Fc gamma RII, and CD14) were detected on the liver-accumulated cells only 4 h after the injection. The pattern of the antigen expression changed to that of Kupffer cells (F4/80+, Fc gamma RII+, Mac-1-) after 4 days and remained so thereafter. These labeled cells in the liver were esterase staining-positive and showed phagocytic activity at day 7. The number of labeled cells among the Kupffer cells in the liver increased with days after injection. This indicates that bone marrow cells accumulate in the liver and differentiate into liver macrophages on site. Roles of factors secreted from hepatocytes are also discussed.

Batch Scheduling for Hybrid Assembly Differentiation Flow Shop to Minimize Total Actual Flow Time

NASA Astrophysics Data System (ADS)

Maulidya, R.; Suprayogi; Wangsaputra, R.; Halim, A. H.

2018-03-01

A hybrid assembly differentiation flow shop is a three-stage flow shop consisting of Machining, Assembly and Differentiation Stages and producing different types of products. In the machining stage, parts are processed in batches on different (unrelated) machines. In the assembly stage, each part of the different parts is assembled into an assembly product. Finally, the assembled products will further be processed into different types of final products in the differentiation stage. In this paper, we develop a batch scheduling model for a hybrid assembly differentiation flow shop to minimize the total actual flow time defined as the total times part spent in the shop floor from the arrival times until its due date. We also proposed a heuristic algorithm for solving the problems. The proposed algorithm is tested using a set of hypothetic data. The solution shows that the algorithm can solve the problems effectively.

Flow Field Measurements Using Hotwire Anemometry.

DTIC Science & Technology

1987-09-01

is connected to the differential pressure transducer, the other is connected to an absolute pressure transducer. Static pressure from the absolute ...and intercept data. The seventh variable contains the calibration tunnel temperature in degrees Farenheit . This is0* . used for hotwire compensation...output is then directed to channel five of the Relay Multiplexer. Voltage output from the signal amplifier is zeroed at 0 degrees AOA and is positive for

Interfacing of differential-capacitive biomimetic hair flow-sensors for optimal sensitivity

NASA Astrophysics Data System (ADS)

Dagamseh, A. M. K.; Bruinink, C. M.; Wiegerink, R. J.; Lammerink, T. S. J.; Droogendijk, H.; Krijnen, G. J. M.

2013-03-01

Biologically inspired sensor-designs are investigated as a possible path to surpass the performance of more traditionally engineered designs. Inspired by crickets, artificial hair sensors have shown the ability to detect minute flow signals. This paper addresses developments in the design, fabrication, interfacing and characterization of biomimetic hair flow-sensors towards sensitive high-density arrays. Improvement of the electrode design of the hair sensors has resulted in a reduction of the smallest hair movements that can be measured. In comparison to the arrayed hairs-sensor design, the detection-limit was arguably improved at least twelve-fold, down to 1 mm s-1 airflow amplitude at 250 Hz as measured in a bandwidth of 3 kHz. The directivity pattern closely resembles a figure-of-eight. These sensitive hair-sensors open possibilities for high-resolution spatio-temporal flow pattern observations.

Accurate population genetic measurements require cryptic species identification in corals

NASA Astrophysics Data System (ADS)

Sheets, Elizabeth A.; Warner, Patricia A.; Palumbi, Stephen R.

2018-06-01

Correct identification of closely related species is important for reliable measures of gene flow. Incorrectly lumping individuals of different species together has been shown to over- or underestimate population differentiation, but examples highlighting when these different results are observed in empirical datasets are rare. Using 199 single nucleotide polymorphisms, we assigned 768 individuals in the Acropora hyacinthus and A. cytherea morphospecies complexes to each of eight previously identified cryptic genetic species and measured intraspecific genetic differentiation across three geographic scales (within reefs, among reefs within an archipelago, and among Pacific archipelagos). We then compared these calculations to estimated genetic differentiation at each scale with all cryptic genetic species mixed as if we could not tell them apart. At the reef scale, correct genetic species identification yielded lower F ST estimates and fewer significant comparisons than when species were mixed, raising estimates of short-scale gene flow. In contrast, correct genetic species identification at large spatial scales yielded higher F ST measurements than mixed-species comparisons, lowering estimates of long-term gene flow among archipelagos. A meta-analysis of published population genetic studies in corals found similar results: F ST estimates at small spatial scales were lower and significance was found less often in studies that controlled for cryptic species. Our results and these prior datasets controlling for cryptic species suggest that genetic differentiation among local reefs may be lower than what has generally been reported in the literature. Not properly controlling for cryptic species structure can bias population genetic analyses in different directions across spatial scales, and this has important implications for conservation strategies that rely on these estimates.

Surprisingly little population genetic structure in a fungus-associated beetle despite its exploitation of multiple hosts

PubMed Central

Wood, Corlett W; Donald, Hannah M; Formica, Vincent A; Brodie, Edmund D

2013-01-01

In heterogeneous environments, landscape features directly affect the structure of genetic variation among populations by functioning as barriers to gene flow. Resource-associated population genetic structure, in which populations that use different resources (e.g., host plants) are genetically distinct, is a well-studied example of how environmental heterogeneity structures populations. However, the pattern that emerges in a given landscape should depend on its particular combination of resources. If resources constitute barriers to gene flow, population differentiation should be lowest in homogeneous landscapes, and highest where resources exist in equal proportions. In this study, we tested whether host community diversity affects population genetic structure in a beetle (Bolitotherus cornutus) that exploits three sympatric host fungi. We collected B. cornutus from plots containing the three host fungi in different proportions and quantified population genetic structure in each plot using a panel of microsatellite loci. We found no relationship between host community diversity and population differentiation in this species; however, we also found no evidence of resource-associated differentiation, suggesting that host fungi are not substantial barriers to gene flow. Moreover, we detected no genetic differentiation among B. cornutus populations separated by several kilometers, even though a previous study demonstrated moderate genetic structure on the scale of a few hundred meters. Although we found no effect of community diversity on population genetic structure in this study, the role of host communities in the structuring of genetic variation in heterogeneous landscapes should be further explored in a species that exhibits resource-associated population genetic structure. PMID:23789061

Biophysical regulation of stem cell differentiation.

PubMed

Govey, Peter M; Loiselle, Alayna E; Donahue, Henry J

2013-06-01

Bone adaptation to its mechanical environment, from embryonic through adult life, is thought to be the product of increased osteoblastic differentiation from mesenchymal stem cells. In parallel with tissue-scale loading, these heterogeneous populations of multipotent stem cells are subject to a variety of biophysical cues within their native microenvironments. Bone marrow-derived mesenchymal stem cells-the most broadly studied source of osteoblastic progenitors-undergo osteoblastic differentiation in vitro in response to biophysical signals, including hydrostatic pressure, fluid flow and accompanying shear stress, substrate strain and stiffness, substrate topography, and electromagnetic fields. Furthermore, stem cells may be subject to indirect regulation by mechano-sensing osteocytes positioned to more readily detect these same loading-induced signals within the bone matrix. Such paracrine and juxtacrine regulation of differentiation by osteocytes occurs in vitro. Further studies are needed to confirm both direct and indirect mechanisms of biophysical regulation within the in vivo stem cell niche.

An algorithmic approach to the brain biopsy--part I.

PubMed

Kleinschmidt-DeMasters, B K; Prayson, Richard A

2006-11-01

The formulation of appropriate differential diagnoses for a slide is essential to the practice of surgical pathology but can be particularly challenging for residents and fellows. Algorithmic flow charts can help the less experienced pathologist to systematically consider all possible choices and eliminate incorrect diagnoses. They can assist pathologists-in-training in developing orderly, sequential, and logical thinking skills when confronting difficult cases. To present an algorithmic flow chart as an approach to formulating differential diagnoses for lesions seen in surgical neuropathology. An algorithmic flow chart to be used in teaching residents. Algorithms are not intended to be final diagnostic answers on any given case. Algorithms do not substitute for training received from experienced mentors nor do they substitute for comprehensive reading by trainees of reference textbooks. Algorithmic flow diagrams can, however, direct the viewer to the correct spot in reference texts for further in-depth reading once they hone down their diagnostic choices to a smaller number of entities. The best feature of algorithms is that they remind the user to consider all possibilities on each case, even if they can be quickly eliminated from further consideration. In Part I, we assist the resident in learning how to handle brain biopsies in general and how to distinguish nonneoplastic lesions that mimic tumors from true neoplasms.

An algorithmic approach to the brain biopsy--part II.

PubMed

Prayson, Richard A; Kleinschmidt-DeMasters, B K

2006-11-01

The formulation of appropriate differential diagnoses for a slide is essential to the practice of surgical pathology but can be particularly challenging for residents and fellows. Algorithmic flow charts can help the less experienced pathologist to systematically consider all possible choices and eliminate incorrect diagnoses. They can assist pathologists-in-training in developing orderly, sequential, and logical thinking skills when confronting difficult cases. To present an algorithmic flow chart as an approach to formulating differential diagnoses for lesions seen in surgical neuropathology. An algorithmic flow chart to be used in teaching residents. Algorithms are not intended to be final diagnostic answers on any given case. Algorithms do not substitute for training received from experienced mentors nor do they substitute for comprehensive reading by trainees of reference textbooks. Algorithmic flow diagrams can, however, direct the viewer to the correct spot in reference texts for further in-depth reading once they hone down their diagnostic choices to a smaller number of entities. The best feature of algorithms is that they remind the user to consider all possibilities on each case, even if they can be quickly eliminated from further consideration. In Part II, we assist the resident in arriving at the correct diagnosis for neuropathologic lesions containing granulomatous inflammation, macrophages, or abnormal blood vessels.

MAINTENANCE OF ECOLOGICALLY SIGNIFICANT GENETIC VARIATION IN THE TIGER SWALLOWTAIL BUTTERFLY THROUGH DIFFERENTIAL SELECTION AND GENE FLOW.

PubMed

Bossart, J L; Scriber, J M

1995-12-01

Differential selection in a heterogeneous environment is thought to promote the maintenance of ecologically significant genetic variation. Variation is maintained when selection is counterbalanced by the homogenizing effects of gene flow and random mating. In this study, we examine the relative importance of differential selection and gene flow in maintaining genetic variation in Papilio glaucus. Differential selection on traits contributing to successful use of host plants (oviposition preference and larval performance) was assessed by comparing the responses of southern Ohio, north central Georgia, and southern Florida populations of P. glaucus to three hosts: Liriodendron tulipifera, Magnolia virginiana, and Prunus serotina. Gene flow among populations was estimated using allozyme frequencies from nine polymorphic loci. Significant genetic differentiation was observed among populations for both oviposition preference and larval performance. This differentiation was interpreted to be the result of selection acting on Florida P. glaucus for enhanced use of Magnolia, the prevalent host in Florida. In contrast, no evidence of population differentiation was revealed by allozyme frequencies. F ST -values were very small and Nm, an estimate of the relative strengths of gene flow and genetic drift, was large, indicating that genetic exchange among P. glaucus populations is relatively unrestricted. The contrasting patterns of spatial differentiation for host-use traits and lack of differentiation for electrophoretically detectable variation implies that differential selection among populations will be counterbalanced by gene flow, thereby maintaining genetic variation for host-use traits. © 1995 The Society for the Study of Evolution.

Fish and invertebrate flow-biology relationships to support the determination of ecological flows for North Carolina

USGS Publications Warehouse

Phelan, Jennifer; Cuffney, Thomas F.; Patterson, Lauren A.; Eddy, Michele; Dykes, Robert; Pearsall, Sam; Goudreau, Chris; Mead, Jim; Tarver, Fred

2017-01-01

A method was developed to characterize fish and invertebrate responses to flow alteration in the state of North Carolina. This method involved using 80th percentile linear quantile regressions to relate six flow metrics to the diversity of riffle-run fish and benthic Ephemeroptera, Plecoptera, and Trichoptera (EPT) richness. All twelve flow-biology relationships were found to be significant, with both benthos and fish showing negative responses to ecodeficits and reductions in flow. The responses of benthic richness to reduced flows were consistent and generally greater than that of fish diversity. However, the riffle-run fish guild showed the greatest reductions in diversity in response to summer ecodeficits. The directional consistency and differential seasonal sensitivities of fish and invertebrates to reductions in flow highlight the need to consider seasonality when managing flows. In addition, all relationships were linear, and therefore do not provide clear thresholds to support ecological flow determinations and flow prescriptions to prevent the degradation of fish and invertebrate communities in North Carolina rivers and streams. A method of setting ecological flows based on the magnitude of change in biological condition that is acceptable to society is explored.

Effects of mountain resort development - a case study in Vermont USA

NASA Astrophysics Data System (ADS)

Shanley, J.; Wemple, B.

2012-04-01

The mountainous landscape of northern New England, USA, faces intense development pressure from recreational and tourism use. In 2000 we began a paired-watershed study in northern Vermont to examine the effects of alpine resort development on stream flow and water quality. To our knowledge this is the only gaged watershed study at a mountain resort. The adjacent paired watersheds have similar topography, relief, geology and forest type, and differ primarily in land use. Ranch Brook watershed (9.6 km2) is the undeveloped, nearly 100% forested control basin. West Branch watershed (11.7 km2) is the developed basin, encompassing a pre-existing alpine ski resort and state highway, with approximately 17% of the basin occupied by ski trails and impervious surfaces. Measurements during 2000-2003 showed suspended sediment yield was >2.5 times greater and concentrations of nitrate and chloride were significantly elevated at West Branch. From 2004 through 2007 the resort expanded with more ski trails, roads, parking areas, and vacation home development and now has 24% cleared land, with storm sewers draining lower developed areas of the alpine watershed. For the 11-year period of study, water yield in the developed basin exceeded that in the control by an average of nearly 21%. The higher runoff at West Branch occurred primarily as result of higher sustained base flow, driven by a more prolonged snowmelt period, and greater runoff during small events. The annual flow differential had a strong positive correlation to maximum snow water equivalent, suggesting that differences in snow accumulation may explain the flow differential. We are investigating whether these differences are a direct consequence of management activities and resulting vegetation shifts and land clearing on snow capture. Several of the highest peak flows in both watersheds have occurred in the last 2 years of the 11-yr study. Our analysis is aimed at determining whether absolute peak flows have increased disproportionately at West Branch relative to the overall flow differential. As actual pre- and post-expansion flows differ markedly from design projections, our study also bears out the need for science-based management decisions.

Analysis of factors affecting gas exchange in intravascular blood gas exchanger.

PubMed

Niranjan, S C; Clark, J W; San, K Y; Zwischenberger, J B; Bidani, A

1994-10-01

A mathematical model of an intravascular hollow-fiber gas-exchange device, called IVOX, has been developed using a Krogh cylinder-like approach with a repeating unit structure comprised of a single fiber with gas flowing through its lumen surrounded by a coaxial cylinder of blood flowing in the opposite direction. Species mass balances on O2 and CO2 result in a nonlinear coupled set of convective-diffusion parabolic partial differential equations that are solved numerically using an alternating-direction implicit finite-difference method. Computed results indicated the presence of a large resistance to gas transport on the external (blood) side of the hollow-fiber exchanger. Increasing gas flow through the device favored CO2 removal from but not O2 addition to blood. Increasing blood flow over the device favored both CO2 removal as well as O2 addition. The rate of CO2 removal increased linearly with the transmural PCO2 gradient imposed across the device. The effect of fiber crimping on blood phase mass transfer resistance was evaluated indirectly by varying species blood diffusivity. Computed results indicated that CO2 excretion by IVOX can be significantly enhanced with improved bulk mixing of vena caval blood around the IVOX fibers.

Direct computation of stochastic flow in reservoirs with uncertain parameters

DOE Office of Scientific and Technical Information (OSTI.GOV)

Dainton, M.P.; Nichols, N.K.; Goldwater, M.H.

1997-01-15

A direct method is presented for determining the uncertainty in reservoir pressure, flow, and net present value (NPV) using the time-dependent, one phase, two- or three-dimensional equations of flow through a porous medium. The uncertainty in the solution is modelled as a probability distribution function and is computed from given statistical data for input parameters such as permeability. The method generates an expansion for the mean of the pressure about a deterministic solution to the system equations using a perturbation to the mean of the input parameters. Hierarchical equations that define approximations to the mean solution at each point andmore » to the field convariance of the pressure are developed and solved numerically. The procedure is then used to find the statistics of the flow and the risked value of the field, defined by the NPV, for a given development scenario. This method involves only one (albeit complicated) solution of the equations and contrasts with the more usual Monte-Carlo approach where many such solutions are required. The procedure is applied easily to other physical systems modelled by linear or nonlinear partial differential equations with uncertain data. 14 refs., 14 figs., 3 tabs.« less

Kinematics and dynamics of salt movement driven by sub-salt normal faulting and supra-salt sediment accumulation - combined analogue experiments and analytical calculations

NASA Astrophysics Data System (ADS)

Warsitzka, Michael; Kukowski, Nina; Kley, Jonas

2017-04-01

In extensional sedimentary basins, the movement of ductile salt is mainly controlled by the vertical displacement of the salt layer, differential loading due to syn-kinematic deposition, and tectonic shearing at the top and the base of the salt layer. During basement normal faulting, salt either tends to flow downward to the basin centre driven by its own weight or it is squeezed upward due to differential loading. In analogue experiments and analytical models, we address the interplay between normal faulting of the sub-salt basement, compaction and density inversion of the supra-salt cover and the kinematic response of the ductile salt layer. The analogue experiments consist of a ductile substratum (silicone putty) beneath a denser cover layer (sand mixture). Both layers are displaced by normal faults mimicked through a downward moving block within the rigid base of the experimental apparatus and the resulting flow patterns in the ductile layer are monitored and analysed. In the computational models using an analytical approximative solution of the Navier-Stokes equation, the steady-state flow velocity in an idealized natural salt layer is calculated in order to evaluate how flow patterns observed in the analogue experiments can be translated to nature. The analytical calculations provide estimations of the prevailing direction and velocity of salt flow above a sub-salt normal fault. The results of both modelling approaches show that under most geological conditions salt moves downwards to the hanging wall side as long as vertical offset and compaction of the cover layer are small. As soon as an effective average density of the cover is exceeded, the direction of the flow velocity reverses and the viscous material is squeezed towards the elevated footwall side. The analytical models reveal that upward flow occurs even if the average density of the overburden does not exceed the density of salt. By testing various scenarios with different layer thicknesses, displacement rate or lithological parameters of the cover, our models suggest that the reversal of material flow usually requires vertical displacements between 700 and 2000 m. The transition from downward to upward flow occurs at smaller fault displacements, if the initial overburden thickness and the overburden density are high and if sedimentation rate keeps pace with the displacement rate of the sub-salt normal fault.

Adjoint optimization of natural convection problems: differentially heated cavity

NASA Astrophysics Data System (ADS)

Saglietti, Clio; Schlatter, Philipp; Monokrousos, Antonios; Henningson, Dan S.

2017-12-01

Optimization of natural convection-driven flows may provide significant improvements to the performance of cooling devices, but a theoretical investigation of such flows has been rarely done. The present paper illustrates an efficient gradient-based optimization method for analyzing such systems. We consider numerically the natural convection-driven flow in a differentially heated cavity with three Prandtl numbers (Pr=0.15{-}7) at super-critical conditions. All results and implementations were done with the spectral element code Nek5000. The flow is analyzed using linear direct and adjoint computations about a nonlinear base flow, extracting in particular optimal initial conditions using power iteration and the solution of the full adjoint direct eigenproblem. The cost function for both temperature and velocity is based on the kinetic energy and the concept of entransy, which yields a quadratic functional. Results are presented as a function of Prandtl number, time horizons and weights between kinetic energy and entransy. In particular, it is shown that the maximum transient growth is achieved at time horizons on the order of 5 time units for all cases, whereas for larger time horizons the adjoint mode is recovered as optimal initial condition. For smaller time horizons, the influence of the weights leads either to a concentric temperature distribution or to an initial condition pattern that opposes the mean shear and grows according to the Orr mechanism. For specific cases, it could also been shown that the computation of optimal initial conditions leads to a degenerate problem, with a potential loss of symmetry. In these situations, it turns out that any initial condition lying in a specific span of the eigenfunctions will yield exactly the same transient amplification. As a consequence, the power iteration converges very slowly and fails to extract all possible optimal initial conditions. According to the authors' knowledge, this behavior is illustrated here for the first time.

Geodesic Monte Carlo on Embedded Manifolds

PubMed Central

Byrne, Simon; Girolami, Mark

2013-01-01

Markov chain Monte Carlo methods explicitly defined on the manifold of probability distributions have recently been established. These methods are constructed from diffusions across the manifold and the solution of the equations describing geodesic flows in the Hamilton–Jacobi representation. This paper takes the differential geometric basis of Markov chain Monte Carlo further by considering methods to simulate from probability distributions that themselves are defined on a manifold, with common examples being classes of distributions describing directional statistics. Proposal mechanisms are developed based on the geodesic flows over the manifolds of support for the distributions, and illustrative examples are provided for the hypersphere and Stiefel manifold of orthonormal matrices. PMID:25309024

Flow cytometric analysis of normal and neoplastic mast cells: role in diagnosis and follow-up of mast cell disease.

PubMed

Escribano, Luis; Garcia Montero, Andres C; Núñez, Rosa; Orfao, Alberto

2006-08-01

Human mast cells (MCs) are directly derived from human pluripotent CD34+ stem and progenitor hematopoietic cells with stem cell factor being a critical growth factor supporting human MC proliferation, differentiation, and survival. Because of the advantages that flow cytometry offers (it allows rapid, objective, and sensitive multiparameter analysis of high numbers of cells from a sample, with information being provided on the basis of a single cell), it has become the method of choice in the past decade for immunophenotypic identification, enumeration, and characterization of human MCs in bone marrow and other tissue specimens.

Low-speed aerodynamic characteristics of a generic forward-swept-wing aircraft

NASA Technical Reports Server (NTRS)

Ross, J. C.; Matarazzo, A. D.

1982-01-01

Low-speed wind-tunnel tests were performed on a generic forward-swept-wing aircraft model in the 7- by 10-Foot Wind Tunnel (No. 2) at Ames Research Center. The effects of various configurational changes and control-surface deflections on the performance of the model were measured. Six-component force measurements were augmented by flow-visualization photographs, using both surface oil-flow and tufts. It was found that the tendency toward premature root separation on the forward-swept wing could be reduced by use of either canards or leading-edge wing strakes and that differential canard deflections can be used to produce a direct side-force control.

Influence of forming conditions on fiber tilt

Treesearch

David W. Vahey; John M. Considine; Michael A. and MacGregor

2013-01-01

Fiber tilt describes the projection of fiber length in the thickness direction of paper. The projection is described by the tilt angle of fibers with respect to the plane of the sheet. A simple model for fiber tilt is based on jet-to-wire velocity differential in combination with cross-flows on the wire. The tilt angle of a fiber is found to vary as the sine of its in-...

Body and brain temperature coupling: the critical role of cerebral blood flow.

PubMed

Zhu, Mingming; Ackerman, Joseph J H; Yablonskiy, Dmitriy A

2009-08-01

Direct measurements of deep-brain and body-core temperature were performed on rats to determine the influence of cerebral blood flow (CBF) on brain temperature regulation under static and dynamic conditions. Static changes of CBF were achieved using different anesthetics (chloral hydrate, CH; alpha-chloralose, alphaCS; and isoflurane, IF) with alphaCS causing larger decreases in CBF than CH and IF; dynamic changes were achieved by inducing transient hypercapnia (5% CO(2) in 40% O(2) and 55% N(2)). Initial deep-brain/body-core temperature differentials were anesthetic-type dependent with the largest differential observed with rats under alphaCS anesthesia (ca. 2 degrees C). Hypercapnia induction raised rat brain temperature under all three anesthesia regimes, but by different anesthetic-dependent amounts correlated with the initial differentials--alphaCS anesthesia resulted in the largest brain temperature increase (0.32 +/- 0.08 degrees C), while CH and IF anesthesia lead to smaller increases (0.12 +/- 0.03 and 0.16 +/- 0.05 degrees C, respectively). The characteristic temperature transition time for the hypercapnia-induced temperature increase was 2-3 min under CH and IF anesthesia and approximately 4 min under alphaCS anesthesia. We conclude that both, the deep-brain/body-core temperature differential and the characteristic temperature transition time correlate with CBF: a lower CBF promotes higher deep-brain/body-core temperature differentials and, upon hypercapnia challenge, longer characteristic transition times to increased temperatures.

Adaptive genetic markers discriminate migratory runs of Chinook salmon (Oncorhynchus tshawytscha) amid continued gene flow

PubMed Central

O'Malley, Kathleen G; Jacobson, Dave P; Kurth, Ryon; Dill, Allen J; Banks, Michael A

2013-01-01

Neutral genetic markers are routinely used to define distinct units within species that warrant discrete management. Human-induced changes to gene flow however may reduce the power of such an approach. We tested the efficiency of adaptive versus neutral genetic markers in differentiating temporally divergent migratory runs of Chinook salmon (Oncorhynchus tshawytscha) amid high gene flow owing to artificial propagation and habitat alteration. We compared seven putative migration timing genes to ten microsatellite loci in delineating three migratory groups of Chinook in the Feather River, CA: offspring of fall-run hatchery broodstock that returned as adults to freshwater in fall (fall run), spring-run offspring that returned in spring (spring run), and fall-run offspring that returned in spring (FRS). We found evidence for significant differentiation between the fall and federally listed threatened spring groups based on divergence at three circadian clock genes (OtsClock1b, OmyFbxw11, and Omy1009UW), but not neutral markers. We thus demonstrate the importance of genetic marker choice in resolving complex life history types. These findings directly impact conservation management strategies and add to previous evidence from Pacific and Atlantic salmon indicating that circadian clock genes influence migration timing. PMID:24478800

The Geophysical Fluid Flow Cell Experiment

NASA Technical Reports Server (NTRS)

Hart, J. E.; Ohlsen, D.; Kittleman, S.; Borhani, N.; Leslie, F.; Miller, T.

1999-01-01

The Geophysical Fluid Flow Cell (GFFC) experiment performed visualizations of thermal convection in a rotating differentially heated spherical shell of fluid. In these experiments dielectric polarization forces are used to generate a radially directed buoyancy force. This enables the laboratory simulation of a number of geophysically and astrophysically important situations in which sphericity and rotation both impose strong constraints on global scale fluid motions. During USML-2 a large set of experiments with spherically symmetric heating were carried out. These enabled the determination of critical points for the transition to various forms of nonaxisymmetric convection and, for highly turbulent flows, the transition latitudes separating the different modes of motion. This paper presents a first analysis of these experiments as well as data on the general performance of the instrument during the USML-2 flight.

Numerical studies of convective heat transfer in an inclined semiannular enclosure

NASA Technical Reports Server (NTRS)

Wang, Lin-Wen; Yung, Chain-Nan; Chai, An-Ti; Rashidnia, Nasser

1989-01-01

Natural convection heat transfer in a two-dimensional differentially heated semiannular enclosure is studied. The enclosure is isothermally heated and cooled at the inner and outer walls, respectively. A commercial software based on the SIMPLER algorithm was used to simulate the velocity and temperature profiles. Various parameters that affect the momentum and heat transfer processes were examined. These parameters include the Rayleigh number, Prandtl number, radius ratio, and the angle of inclination. A flow regime extending from conduction-dominated to convection-dominated flow was examined. The computed results of heat transfer are presented as a function of flow parameter and geometric factors. It is found that the heat transfer rate attains a minimum when the enclosure is tilted about +50 deg with respect to the gravitational direction.

Paleomagnetism of the Miocene Columbia River Basalt Group in Oregon and Washington from the Pacific Coast to the Columbia Plateau: Magnetostratigraphy, Vertical-Axis Rotations, Paleosecular Variation, and Remagnetization

NASA Astrophysics Data System (ADS)

Hagstrum, J. T.; Wells, R. E.; Evarts, R. C.; Niem, A. R.; Sawlan, M. G.; Blakely, R. J.

2008-12-01

Identification of individual flows within the Columbia River Basalt Group (CRBG) has mostly relied on minor differences in geochemistry, but magnetic polarity has also proved useful in differentiating flows and establishing a temporal framework. Within the thick, rapidly erupted Grande Ronde Basalt four major polarity chrons (R1 to N2) have been identified. Because cooling times of CRBG flows are brief compared to rates of paleosecular variation (PSV), within-flow paleomagnetic directions are expected to be constant across the extensive east-west reaches of these flows. Vertical-axis rotations in OR and WA, driven by northward-oblique subduction of the Juan de Fuca plate, thus can be measured by comparing directions for western sampling localities to directions for the same flow units on the relatively stable Columbia Plateau. Clockwise rotations calculated for outcrop locations within the Coast Range (CR) block are uniformly about 30° (N=102 sites). East of the northwest-trending en échelon Mt. Angel-Gales Creek, Portland Hills, and northern unnamed fault zones, as well as north of the CR block's northern boundary (~Columbia River), clockwise rotations abruptly drop to about 15° (N=39 sites), with offsets in these bounding fault zones corresponding to the Portland and Willamette pull-apart basins. The general agreement of vertical- axis rotation rates estimated from CRBG magnetizations with those determined from modern GPS velocities indicates a relatively steady rate over the last 10 to 15 Myr. Unusual directions due to PSV, field excursions, or polarity transitions could provide useful stratigraphic markers. Individual flow directions, however, have not been routinely used to identify flows. One reason this has been difficult is that remagnetization is prevalent, particularly in the Coast Ranges, coupled with earlier demagnetization techniques that did not completely remove overprint components. Except for the Ginkgo and Pomona flows of the Wanapum and Saddle Mountains Basalts, reference Plateau directions for the CRBG are poorly known. Moreover, field and drill- core relations indicate that flows with different chemistries were erupted at the same time. Renewed sampling, therefore, has been undertaken eastward from the Portland area into the Columbia River Gorge and out onto the Plateau. Resampling of the Patrick Grade section (23 flows) in southeastern WA has shown that overprint magnetizations were not successfully removed in many flows at this locality in an earlier study [1]. This brings into question blanket demagnetization studies of the CRBG as well as polarity measurements routinely made in the field with hand-held fluxgate magnetometers. [1] Choiniere and Swanson, 1979, Am. J. Sci., 279, p. 755

Free Convection Nanofluid Flow in the Stagnation-Point Region of a Three-Dimensional Body

PubMed Central

Farooq, Umer

2014-01-01

Analytical results are presented for a steady three-dimensional free convection flow in the stagnation point region over a general curved isothermal surface placed in a nanofluid. The momentum equations in x- and y-directions, energy balance equation, and nanoparticle concentration equation are reduced to a set of four fully coupled nonlinear differential equations under appropriate similarity transformations. The well known technique optimal homotopy analysis method (OHAM) is used to obtain the exact solution explicitly, whose convergence is then checked in detail. Besides, the effects of the physical parameters, such as the Lewis number, the Brownian motion parameter, the thermophoresis parameter, and the buoyancy ratio on the profiles of velocities, temperature, and concentration, are studied and discussed. Furthermore the local skin friction coefficients in x- and y-directions, the local Nusselt number, and the local Sherwood number are examined for various values of the physical parameters. PMID:25114954

Some Advanced Concepts in Discrete Aerodynamic Sensitivity Analysis

NASA Technical Reports Server (NTRS)

Taylor, Arthur C., III; Green, Lawrence L.; Newman, Perry A.; Putko, Michele M.

2003-01-01

An efficient incremental iterative approach for differentiating advanced flow codes is successfully demonstrated on a two-dimensional inviscid model problem. The method employs the reverse-mode capability of the automatic differentiation software tool ADIFOR 3.0 and is proven to yield accurate first-order aerodynamic sensitivity derivatives. A substantial reduction in CPU time and computer memory is demonstrated in comparison with results from a straightforward, black-box reverse-mode applicaiton of ADIFOR 3.0 to the same flow code. An ADIFOR-assisted procedure for accurate second-rder aerodynamic sensitivity derivatives is successfully verified on an inviscid transonic lifting airfoil example problem. The method requires that first-order derivatives are calculated first using both the forward (direct) and reverse (adjoinct) procedures; then, a very efficient noniterative calculation of all second-order derivatives can be accomplished. Accurate second derivatives (i.e., the complete Hesian matrices) of lift, wave drag, and pitching-moment coefficients are calculated with respect to geometric shape, angle of attack, and freestream Mach number.

Some Advanced Concepts in Discrete Aerodynamic Sensitivity Analysis

NASA Technical Reports Server (NTRS)

Taylor, Arthur C., III; Green, Lawrence L.; Newman, Perry A.; Putko, Michele M.

2001-01-01

An efficient incremental-iterative approach for differentiating advanced flow codes is successfully demonstrated on a 2D inviscid model problem. The method employs the reverse-mode capability of the automatic- differentiation software tool ADIFOR 3.0, and is proven to yield accurate first-order aerodynamic sensitivity derivatives. A substantial reduction in CPU time and computer memory is demonstrated in comparison with results from a straight-forward, black-box reverse- mode application of ADIFOR 3.0 to the same flow code. An ADIFOR-assisted procedure for accurate second-order aerodynamic sensitivity derivatives is successfully verified on an inviscid transonic lifting airfoil example problem. The method requires that first-order derivatives are calculated first using both the forward (direct) and reverse (adjoint) procedures; then, a very efficient non-iterative calculation of all second-order derivatives can be accomplished. Accurate second derivatives (i.e., the complete Hessian matrices) of lift, wave-drag, and pitching-moment coefficients are calculated with respect to geometric- shape, angle-of-attack, and freestream Mach number

FDDO and DSMC analyses of rarefied gas flow through 2D nozzles

NASA Technical Reports Server (NTRS)

Chung, Chan-Hong; De Witt, Kenneth J.; Jeng, Duen-Ren; Penko, Paul F.

1992-01-01

Two different approaches, the finite-difference method coupled with the discrete-ordinate method (FDDO), and the direct-simulation Monte Carlo (DSMC) method, are used in the analysis of the flow of a rarefied gas expanding through a two-dimensional nozzle and into a surrounding low-density environment. In the FDDO analysis, by employing the discrete-ordinate method, the Boltzmann equation simplified by a model collision integral is transformed to a set of partial differential equations which are continuous in physical space but are point functions in molecular velocity space. The set of partial differential equations are solved by means of a finite-difference approximation. In the DSMC analysis, the variable hard sphere model is used as a molecular model and the no time counter method is employed as a collision sampling technique. The results of both the FDDO and the DSMC methods show good agreement. The FDDO method requires less computational effort than the DSMC method by factors of 10 to 40 in CPU time, depending on the degree of rarefaction.

Advances in the analysis and prediction of turbulent viscoelastic flows

NASA Astrophysics Data System (ADS)

Gatski, T. B.; Thais, L.; Mompean, G.

2014-08-01

It has been well-known for over six decades that the addition of minute amounts of long polymer chains to organic solvents, or water, can lead to significant turbulent drag reduction. This discovery has had many practical applications such as in pipeline fluid transport, oil well operations, vehicle design and submersible vehicle projectiles, and more recently arteriosclerosis treatment. However, it has only been the last twenty-five years that the full utilization of direct numerical simulation of such turbulent viscoelastic flows has been achieved. The unique characteristics of viscoelastic fluid flow are dictated by the nonlinear differential relationship between the flow strain rate field and the extra-stress induced by the additive polymer. A primary motivation for the analysis of these turbulent fluid flows is the understanding of the effect on the dynamic transfer of energy in the turbulent flow due to the presence of the extra-stress field induced by the presence of the viscoelastic polymer chain. Such analyses now utilize direct numerical simulation data of fully developed channel flow for the FENE-P (Finite Extendable Nonlinear Elastic - Peterlin) fluid model. Such multi-scale dynamics suggests an analysis of the transfer of energy between the various component motions that include the turbulent kinetic energy, and the mean polymeric and elastic potential energies. It is shown that the primary effect of the interaction between the turbulent and polymeric fields is to transfer energy from the turbulence to the polymer.

Hydrological simulation of Sperchios River basin in Central Greece using the MIKE SHE model and geographic information systems

NASA Astrophysics Data System (ADS)

Paparrizos, Spyridon; Maris, Fotios

2017-05-01

The MIKE SHE model is able to simulate the entire stream flow which includes direct and basic flow. Many models either do not simulate or use simplistic methods to determine the basic flow. The MIKE SHE model takes into account many hydrological data. Since this study was directed towards the simulation of surface runoff and infiltration into saturated and unsaturated zone, the MIKE SHE is an appropriate model for reliable conclusions. In the current research, the MIKE SHE model was used to simulate runoff in the area of Sperchios River basin. Meteorological data from eight rainfall stations within the Sperchios River basin were used as inputs. Vegetation as well as geological data was used to perform the calibration and validation of the physical processes of the model. Additionally, ArcGIS program was used. The results indicated that the model was able to simulate the surface runoff satisfactorily, representing all the hydrological data adequately. Some minor differentiations appeared which can be eliminated with the appropriate adjustments that can be decided by the researcher's experience.

Surface configuration as an explanation for lithology-related cross-polarized radar image anomalies

NASA Technical Reports Server (NTRS)

Mccauley, J. R.

1973-01-01

One problem that has persisted since the development of multipolarized radar is the cause or causes of differential depolarization which is expressed as tonal reversals between like- and cross-polarized images of certain outcrops. Rocks producing anomalously low returns on the cross-polarized image could be classed into three general types: (1) certain geologically recent lava flows (late Pleistocene and Holocene), (2) some tertiary volcanics and (3) certain massive sandstones. Differential depolarization has been produced by volcanic rocks of various compositions including rhyolite, rhyodacite, dacite, andesite, and basalt. This has led to the conclusion that differential depolarization is not directly caused by any compositional factor. However, the study of aerial photos and subsequent field observation have led to the conclusion that the weathering and other surface characteristics of the outcrops are responsible for their appearance on multipolarized imagery.

Secondary contact and asymmetrical gene flow in a cosmopolitan marine fish across the Benguela upwelling zone

PubMed Central

Reid, K; Hoareau, T B; Graves, J E; Potts, W M; dos Santos, S M R; Klopper, A W; Bloomer, P

2016-01-01

The combination of oceanographic barriers and habitat heterogeneity are known to reduce connectivity and leave specific genetic signatures in the demographic history of marine species. However, barriers to gene flow in the marine environment are almost never impermeable which inevitably allows secondary contact to occur. In this study, eight sampling sites (five along the South African coastline, one each in Angola, Senegal and Portugal) were chosen to examine the population genetic structure and phylogeographic history of the cosmopolitan bluefish (Pomatomus saltatrix), distributed across a large South-east Atlantic upwelling zone. Molecular analyses were applied to mtDNA cytochrome b, intron AM2B1 and 15 microsatellite loci. We detected uncharacteristically high genetic differentiation (FST 0.15–0.20; P<0.001) between the fish sampled from South Africa and the other sites, strongly influenced by five outlier microsatellite loci located in conserved intergenic regions. In addition, differentiation among the remaining East Atlantic sites was detected, although mtDNA indicated past isolation with subsequent secondary contact between these East Atlantic populations. We further identified secondary contact, with unidirectional gene flow from South Africa to Angola. The directional contact is likely explained by a combination of the northward flowing offshore current and endogenous incompatibilities restricting integration of certain regions of the genome and limiting gene flow to the south. The results confirm that the dynamic system associated with the Benguela current upwelling zone influences species distributions and population processes in the South-east Atlantic. PMID:27436525

Secondary contact and asymmetrical gene flow in a cosmopolitan marine fish across the Benguela upwelling zone.

PubMed

Reid, K; Hoareau, T B; Graves, J E; Potts, W M; Dos Santos, S M R; Klopper, A W; Bloomer, P

2016-11-01

The combination of oceanographic barriers and habitat heterogeneity are known to reduce connectivity and leave specific genetic signatures in the demographic history of marine species. However, barriers to gene flow in the marine environment are almost never impermeable which inevitably allows secondary contact to occur. In this study, eight sampling sites (five along the South African coastline, one each in Angola, Senegal and Portugal) were chosen to examine the population genetic structure and phylogeographic history of the cosmopolitan bluefish (Pomatomus saltatrix), distributed across a large South-east Atlantic upwelling zone. Molecular analyses were applied to mtDNA cytochrome b, intron AM2B1 and 15 microsatellite loci. We detected uncharacteristically high genetic differentiation (F ST 0.15-0.20; P<0.001) between the fish sampled from South Africa and the other sites, strongly influenced by five outlier microsatellite loci located in conserved intergenic regions. In addition, differentiation among the remaining East Atlantic sites was detected, although mtDNA indicated past isolation with subsequent secondary contact between these East Atlantic populations. We further identified secondary contact, with unidirectional gene flow from South Africa to Angola. The directional contact is likely explained by a combination of the northward flowing offshore current and endogenous incompatibilities restricting integration of certain regions of the genome and limiting gene flow to the south. The results confirm that the dynamic system associated with the Benguela current upwelling zone influences species distributions and population processes in the South-east Atlantic.

The Effect of Hemodynamics on Cerebral Aneurysm Morphology

NASA Astrophysics Data System (ADS)

Metcalfe, Ralph; Mantha, Aishwarya; Karmonik, Christof; Strother, Charles

2004-11-01

One of the difficulties in applying principles of hemodynamics to the study of blood flow in aneurysms are the drastic variations in possible shape of both the aneurysms and the parent arteries in the region of interest. We have taken data from three para-opthalmic internal carotid artery aneurysms using 3D-digital subtraction angiography (3D-DSA) and performed CFD simulations of steady and unsteady flows through the three different cases using the same pressure gradients and pulsatile flow waveforms (based on the Ku model for flow through the Carotid bifurcation). We have found that the total pressure differential within the aneurysms is consistent with the direction of flow, and that the dynamic pressure gradient within the aneurysm is very small compared with the static pressure variations. Wall shear stresses were highest near regions of sharp arterial curvature, but always remained low inside the aneurysm. These results suggest a more complex role for hemodynamics in aneurysm generation, growth and rupture.

Application of PDF methods to compressible turbulent flows

NASA Astrophysics Data System (ADS)

Delarue, B. J.; Pope, S. B.

1997-09-01

A particle method applying the probability density function (PDF) approach to turbulent compressible flows is presented. The method is applied to several turbulent flows, including the compressible mixing layer, and good agreement is obtained with experimental data. The PDF equation is solved using a Lagrangian/Monte Carlo method. To accurately account for the effects of compressibility on the flow, the velocity PDF formulation is extended to include thermodynamic variables such as the pressure and the internal energy. The mean pressure, the determination of which has been the object of active research over the last few years, is obtained directly from the particle properties. It is therefore not necessary to link the PDF solver with a finite-volume type solver. The stochastic differential equations (SDE) which model the evolution of particle properties are based on existing second-order closures for compressible turbulence, limited in application to low turbulent Mach number flows. Tests are conducted in decaying isotropic turbulence to compare the performances of the PDF method with the Reynolds-stress closures from which it is derived, and in homogeneous shear flows, at which stage comparison with direct numerical simulation (DNS) data is conducted. The model is then applied to the plane compressible mixing layer, reproducing the well-known decrease in the spreading rate with increasing compressibility. It must be emphasized that the goal of this paper is not as much to assess the performance of models of compressibility effects, as it is to present an innovative and consistent PDF formulation designed for turbulent inhomogeneous compressible flows, with the aim of extending it further to deal with supersonic reacting flows.

A theoretical study of the acoustic impedance of orifices in the presence of a steady grazing flow

NASA Technical Reports Server (NTRS)

Rice, E. J.

1976-01-01

An analysis of the oscillatory fluid flow in the vicinity of a circular orifice with a steady grazing flow is presented. The study is similar to that of Hersh and Rogers but with the addition of the grazing flow. Starting from the momentum and continuity equations, a considerably simplified system of partial differential equations is developed with the assumption that the flow can be described by an oscillatory motion superimposed upon the known steady flow. The equations are seen to be linear in the region where the grazing flow effects are dominant, and a solution and the resulting orifice impedance are presented for this region. The nonlinearity appears to be unimportant for the usual conditions found in aircraft noise suppressors. Some preliminary conclusions of the study are that orifice resistance is directly proportional to grazing flow velocity (known previously from experimental data) and that the orifice inductive (mass reactance) end correction is not a function of grazing flow. This latter conclusion is contrary to the widely held notion that grazing flow removes the effect of the orifice inductive end correction. This conclusion also implies that the experimentally observed total inductance reduction with grazing flow might be in the flow within the orifice rather than in the end correction.

A paradigm for modeling and computation of gas dynamics

NASA Astrophysics Data System (ADS)

Xu, Kun; Liu, Chang

2017-02-01

In the continuum flow regime, the Navier-Stokes (NS) equations are usually used for the description of gas dynamics. On the other hand, the Boltzmann equation is applied for the rarefied flow. These two equations are based on distinguishable modeling scales for flow physics. Fortunately, due to the scale separation, i.e., the hydrodynamic and kinetic ones, both the Navier-Stokes equations and the Boltzmann equation are applicable in their respective domains. However, in real science and engineering applications, they may not have such a distinctive scale separation. For example, around a hypersonic flying vehicle, the flow physics at different regions may correspond to different regimes, where the local Knudsen number can be changed significantly in several orders of magnitude. With a variation of flow physics, theoretically a continuous governing equation from the kinetic Boltzmann modeling to the hydrodynamic Navier-Stokes dynamics should be used for its efficient description. However, due to the difficulties of a direct modeling of flow physics in the scale between the kinetic and hydrodynamic ones, there is basically no reliable theory or valid governing equations to cover the whole transition regime, except resolving flow physics always down to the mean free path scale, such as the direct Boltzmann solver and the Direct Simulation Monte Carlo (DSMC) method. In fact, it is an unresolved problem about the exact scale for the validity of the NS equations, especially in the small Reynolds number cases. The computational fluid dynamics (CFD) is usually based on the numerical solution of partial differential equations (PDEs), and it targets on the recovering of the exact solution of the PDEs as mesh size and time step converging to zero. This methodology can be hardly applied to solve the multiple scale problem efficiently because there is no such a complete PDE for flow physics through a continuous variation of scales. For the non-equilibrium flow study, the direct modeling methods, such as DSMC, particle in cell, and smooth particle hydrodynamics, play a dominant role to incorporate the flow physics into the algorithm construction directly. It is fully legitimate to combine the modeling and computation together without going through the process of constructing PDEs. In other words, the CFD research is not only to obtain the numerical solution of governing equations but to model flow dynamics as well. This methodology leads to the unified gas-kinetic scheme (UGKS) for flow simulation in all flow regimes. Based on UGKS, the boundary for the validation of the Navier-Stokes equations can be quantitatively evaluated. The combination of modeling and computation provides a paradigm for the description of multiscale transport process.

Magnetorheological rotational flow with viscous dissipation

NASA Astrophysics Data System (ADS)

Ashrafi, Nariman

2017-11-01

Effects of a magnetic field and fluid nonlinearity are investigated for the rotational flow of the Carreau-type fluid while viscous dissipation is taken into account. The governing motion and energy balance equations are coupled, adding complexity to the already highly correlated set of differential equations. The numerical solution is obtained for the narrow-gap limit and steady-state base flow. Magnetic field effect on local entropy generation due to steady two-dimensional laminar forced convection flow was investigated. This study was focused on the entropy generation characteristics and its dependency on various dimensionless parameters. The effects of the Hartmann number, the Brinkman number, and the Deborah number on the stability of the flow were investigated. The introduction of the magnetic field induces a resistive force acting in the opposite direction of the flow, thus causing its deceleration. Moreover, the study shows that the presence of magnetic field tends to slow down the fluid motion. It, however, increases the fluid temperature. Moreover, the total entropy generation number decreases as the Hartmann number and fluid elasticity increase and increases with increasing Brinkman number.

Photospheric Magnetic Flux Transport - Supergranules Rule

NASA Technical Reports Server (NTRS)

Hathaway, David H.; Rightmire-Upton, Lisa

2012-01-01

Observations of the transport of magnetic flux in the Sun's photosphere show that active region magnetic flux is carried far from its origin by a combination of flows. These flows have previously been identified and modeled as separate axisymmetric processes: differential rotation, meridional flow, and supergranule diffusion. Experiments with a surface convective flow model reveal that the true nature of this transport is advection by the non-axisymmetric cellular flows themselves - supergranules. Magnetic elements are transported to the boundaries of the cells and then follow the evolving boundaries. The convective flows in supergranules have peak velocities near 500 m/s. These flows completely overpower the superimposed 20 m/s meridional flow and 100 m/s differential rotation. The magnetic elements remain pinned at the supergranule boundaries. Experiments with and without the superimposed axisymmetric photospheric flows show that the axisymmetric transport of magnetic flux is controlled by the advection of the cellular pattern by underlying flows representative of deeper layers. The magnetic elements follow the differential rotation and meridional flow associated with the convection cells themselves -- supergranules rule!

Differentiating flow, melt, or fossil seismic anisotropy beneath Ethiopia

NASA Astrophysics Data System (ADS)

Hammond, J. O. S.; Kendall, J.-M.; Wookey, J.; Stuart, G. W.; Keir, D.; Ayele, A.

2014-05-01

Ethiopia is a region where continental rifting gives way to oceanic spreading. Yet the role that pre-existing lithospheric structure, melt, mantle flow, or active upwellings may play in this process is debated. Measurements of seismic anisotropy are often used to attempt to understand the contribution that these mechanisms may play. In this study, we use new data in Afar, Ethiopia along with legacy data across Ethiopia, Djibouti, and Yemen to obtain estimates of mantle anisotropy using SKS-wave splitting. We show that two layers of anisotropy exist, and we directly invert for these. We show that fossil anisotropy with fast directions oriented northeast-southwest may be preserved in the lithosphere away from the rift. Beneath the Main Ethiopian Rift and parts of Afar, anisotropy due to shear segregated melt along sharp changes in lithospheric thickness dominates the shear-wave splitting signal in the mantle. Beneath Afar, away from regions with significant lithospheric topography, melt pockets associated with the crustal and uppermost mantle magma storage dominate the signal in localized regions. In general, little anisotropy is seen in the uppermost mantle beneath Afar suggesting melt retains no preferential alignment. These results show the important role melt plays in weakening the lithosphere and imply that as rifting evolves passive upwelling sustains extension. A dominant northeast-southwest anisotropic fast direction is observed in a deeper layer across all of Ethiopia. This suggests that a conduit like plume is lacking beneath Afar today, rather a broad flow from the southwest dominates flow in the upper mantle.

A users guide for A344: A program using a finite difference method to analyze transonic flow over oscillating airfoils

NASA Technical Reports Server (NTRS)

Weatherill, W. H.; Ehlers, F. E.

1979-01-01

The design and usage of a pilot program for calculating the pressure distributions over harmonically oscillating airfoils in transonic flow are described. The procedure used is based on separating the velocity potential into steady and unsteady parts and linearizing the resulting unsteady differential equations for small disturbances. The steady velocity potential which must be obtained from some other program, was required for input. The unsteady equation, as solved, is linear with spatially varying coefficients. Since sinusoidal motion was assumed, time was not a variable. The numerical solution was obtained through a finite difference formulation and either a line relaxation or an out of core direct solution method.

Further investigation of a finite difference procedure for analyzing the transonic flow about harmonically oscillating airfoils and wings

NASA Technical Reports Server (NTRS)

Weatherill, W. H.; Ehlers, F. E.; Yip, E.; Sebastian, J. D.

1980-01-01

Analytical and empirical studies of a finite difference method for the solution of the transonic flow about harmonically oscillating wings and airfoils are presented. The procedure is based on separating the velocity potential into steady and unsteady parts and linearizing the resulting unsteady equations for small disturbances. The steady velocity potential is obtained first from the well-known nonlinear equation for steady transonic flow. The unsteady velocity potential is then obtained from a linear differential equation in complex form with spatially varying coefficients. Since sinusoidal motion is assumed, the unsteady equation is independent of time. An out-of-core direct solution procedure was developed and applied to two-dimensional sections. Results are presented for a section of vanishing thickness in subsonic flow and an NACA 64A006 airfoil in supersonic flow. Good correlation is obtained in the first case at values of Mach number and reduced frequency of direct interest in flutter analyses. Reasonable results are obtained in the second case. Comparisons of two-dimensional finite difference solutions with exact analytic solutions indicate that the accuracy of the difference solution is dependent on the boundary conditions used on the outer boundaries. Homogeneous boundary conditions on the mesh edges that yield complex eigenvalues give the most accurate finite difference solutions. The plane outgoing wave boundary conditions meet these requirements.

Thermocouple Boundary Layer Rake

NASA Technical Reports Server (NTRS)

Hwang, Danny P. (Inventor); Will, Herbert A. (Inventor); Fralick, Gustave C. (Inventor)

2002-01-01

Apparatus and method for providing a velocity flow profile near a reference surface. A measuring device utilizes a plurality of thermojunction pairs to provide the velocity flow profile in accordance with behavior of a gas relative to a constant thickness strut which stands vertically from the reference surface such that the span is normal to the surface, and the chord is parallel to the surface along the initial flow direction. Each thermojunction is carried on either side of a heater formed on a measuring surface in a constant thickness portion of a strut. Additionally, each thermojunction of a given pair is located at a predetermined height from the reference surface. Gas velocity data obtained from temperature differentials from one side of the heater to the other at each successive height is utilized to generate the velocity and turbulence level profiles.

Simulating rotating fluid bodies: When is vorticity generation via density-stratification important?

NASA Astrophysics Data System (ADS)

Evonuk, M.; Samuel, H.

2012-04-01

Differential rotation is one of the key components needed to maintain a magnetic dynamo, therefore it is important to understand the processes that generate differential rotation in rotating bodies. In a rotating density-stratified fluid, local vorticity generation occurs as fluid parcels move radially, expanding or contracting with respect to the background density stratification. The convergence of this vorticity forms zonal flow structures as a function of the radius and the slope of the background density profile. While this effect is thought to be of importance in bodies that are quickly rotating and highly turbulent with large density stratifications such as Jupiter, it is generally neglected in bodies such as the Earth's outer core, where the density change is small. Simulations of thermal convection in the 2D rotating equatorial plane are conducted to determine the parameter regime where local vorticity generation plays a significant role in organizing the fluid flow. Three regimes are found: a dipolar flow regime, where the flow is not organized by the rotation, a transitional flow regime, and a differential flow regime, where the flow is strongly organized into differential rotation with multiple jets. A scaling law is determined based on the convective Rossby number and the density contrast across the equatorial plane, providing a simple way to determine in which regime a given body lies. While a giant planet such as Jupiter lies firmly in the differential flow regime as expected, the Earth's outer core is also found to lie in the differential flow regime indicating that, even in the Earth's outer core, where the density contrast is small, vorticity contributions via fluid movement through the density stratification may be non-negligible.

Simulating rotating fluid bodies: When is vorticity generation via density-stratification important?

NASA Astrophysics Data System (ADS)

Evonuk, M.; Samuel, H.

2012-12-01

Differential rotation is one of the key components needed to maintain a magnetic dynamo, therefore it is important to understand the processes that generate differential rotation in rotating bodies. In a rotating density-stratified fluid, local vorticity generation occurs as fluid parcels move radially, expanding or contracting with respect to the background density stratification. The convergence of this vorticity forms zonal flow structures as a function of the radius and the slope of the background density profile. While this effect is thought to be of importance in bodies that are quickly rotating and highly turbulent with large density stratifications such as Jupiter, it is generally neglected in bodies such as the Earth's outer core, where the density change is small. Simulations of thermal convection in the 2D rotating equatorial plane are conducted to determine the parameter regime where local vorticity generation plays a significant role in organizing the fluid flow. Three regimes are found: a dipolar flow regime, where the flow is not organized by the rotation, a transitional flow regime, and a differential flow regime, where the flow is strongly organized into differential rotation with multiple jets. A scaling law is determined based on the convective Rossby number and the density contrast across the equatorial plane, providing a simple way to determine in which regime a given body lies. While a giant planet such as Jupiter lies firmly in the differential flow regime as expected, the Earth's outer core is also found to lie in the differential flow regime indicating that, even in the Earth's outer core, where the density contrast is small, vorticity contributions via fluid movement through the density stratification may be non-negligible.

Simulating rotating fluid bodies: When is vorticity generation via density-stratification important?

NASA Astrophysics Data System (ADS)

Evonuk, M.; Samuel, H.

2012-02-01

Differential rotation is one of the key components needed to maintain a magnetic dynamo, therefore it is important to understand the processes that generate differential rotation in rotating bodies. In a rotating density-stratified fluid, local vorticity generation occurs as fluid parcels move radially, expanding or contracting with respect to the background density stratification. The convergence of this vorticity forms zonal flow structures as a function of the radius and the slope of the background density profile. While this effect is thought to be of importance in bodies that are quickly rotating and highly turbulent with large density stratifications such as Jupiter, it is generally neglected in bodies such as the Earth's outer core, where the density change is small. Simulations of thermal convection in the 2D rotating equatorial plane are conducted to determine the parameter regime where local vorticity generation plays a significant role in organizing the fluid flow. Three regimes are found: a dipolar flow regime, where the flow is not organized by the rotation, a transitional flow regime, and a differential flow regime, where the flow is strongly organized into differential rotation with multiple jets. A scaling law is determined based on the convective Rossby number and the density contrast across the equatorial plane, providing a simple way to determine in which regime a given body lies. While a giant planet such as Jupiter lies firmly in the differential flow regime as expected, the Earth's outer core is also found to lie in the differential flow regime indicating that, even in the Earth's outer core, where the density contrast is small, vorticity contributions via fluid movement through the density stratificationmay be non-negligible.

Conservation laws and conserved quantities for (1+1)D linearized Boussinesq equations

NASA Astrophysics Data System (ADS)

Carvalho, Cindy; Harley, Charis

2017-05-01

Conservation laws and physical conserved quantities for the (1+1)D linearized Boussinesq equations at a constant water depth are presented. These equations describe incompressible, inviscid, irrotational fluid flow in the form of a non steady solitary wave. A systematic multiplier approach is used to obtain the conservation laws of the system of third order partial differential equations (PDEs) in dimensional form. Physical conserved quantities are derived by integrating the conservation laws in the direction of wave propagation and imposing decaying boundary conditions in the horizontal direction. One of these is a newly discovered conserved quantity which relates to an energy flux density.

Latitudinal Transport of Angular Momentum by Cellular Flows Observed with MDI

NASA Technical Reports Server (NTRS)

Hathaway, David H.; Gilman, Peter A.; Beck, John G.; Rose, M. Franklin (Technical Monitor)

2001-01-01

We have analyzed Doppler velocity images from the MDI instrument on SOHO to determine the latitudinal transport of angular momentum by the cellular photospheric flows. Doppler velocity images from 60-days in May to July of 1996 were processed to remove the p-mode oscillations, the convective blue shift, the axisymmetric flows, and any instrumental artifacts. The remaining cellular flows were examined for evidence of latitudinal angular momentum transport. Small cells show no evidence of any such transport. Cells the size of supergranules (30,000 km in diameter) show strong evidence for a poleward transport of angular momentum. This would be expected if supergranules are influenced by the Coriolis force, and if the cells are elongated in an east-west direction. We find good evidence for just such an east-west elongation of the supergranules. This elongation may be the result of differential rotation shearing the cellular structures. Data simulations of this effect support the conclusion that elongated supergranules transport angular momentum from the equator toward the poles, Cells somewhat larger than supergranules do not show evidence for this poleward transport. Further analysis of the data is planned to determine if the direction of angular momentum transport reverses for even larger cellular structures. The Sun's rapidly rotating equator must be maintained by such transport somewhere within the convection zone.

An In-Well Point Velocity Probe for the rapid determination of groundwater velocity at the centimeter-scale

NASA Astrophysics Data System (ADS)

Osorno, Trevor C.; Devlin, J. F.; Firdous, Rubina

2018-02-01

The In-Well Point Velocity Probe (IWPVP) is a novel device designed for obtaining rapid, initial measurements of groundwater velocity at the centimeter-scale using a standard monitoring well to access the subsurface. IWPVP measurements of groundwater speed are quantified on the basis of a mini-tracer test that is conducted within the body of the probe. Information regarding horizontal flow directions is obtained from differential responses at detectors placed in the four quadrants of the probe. The viability of the IWPVP design was confirmed by (1) numerical modeling that accounted for laminar flow in the porous medium outside the well and turbulent flow inside the well (and probe), and (2) a series of laboratory tank experiments in which the probe was calibrated to quantify seepage rates in a medium-grain sand. Laboratory tests were completed in less than 20 min in all cases, when seepage velocity was between 50 and 400 cm/day. The magnitude of the groundwater velocity was determined with a precision of ±7% on average, and accuracy of ±11% for seepage velocities up to 400 cm/day. The flow direction was determined within ±15°. The IWPVP appears to be a viable tool for rapid assessment of groundwater velocity.

Quantification of Focal Outflow Enhancement Using Differential Canalograms

PubMed Central

Loewen, Ralitsa T.; Brown, Eric N.; Scott, Gordon; Parikh, Hardik; Schuman, Joel S.; Loewen, Nils A.

2016-01-01

Purpose To quantify regional changes of conventional outflow caused by ab interno trabeculectomy (AIT). Methods Gonioscopic, plasma-mediated AIT was established in enucleated pig eyes. We developed a program to automatically quantify outflow changes (R, package eye-canalogram, github.com) using a fluorescent tracer reperfusion technique. Trabecular meshwork (TM) ablation was demonstrated with fluorescent spheres in six eyes before formal outflow quantification with two-dye reperfusion canalograms in six additional eyes. Eyes were perfused with a central, intracameral needle at 15 mm Hg. Canalograms and histology were correlated for each eye. Results The pig eye provided a model with high similarity to AIT in human patients. Histology indicated ablation of TM and unroofing of most Schlemm's canal segments. Spheres highlighted additional circumferential and radial outflow beyond the immediate area of ablation. Differential canalograms showed that AIT caused an increase of outflow of 17 ± 5-fold inferonasally, 14 ± 3-fold superonasally, and also an increase in the opposite quadrants with a 2 ± 1-fold increase superotemporally, and 3 ± 3 inferotemporally. Perilimbal specific flow image analysis showed an accelerated nasal filling with an additional perilimbal flow direction into adjacent quadrants. Conclusions A quantitative, differential canalography technique was developed that allows us to quantify supraphysiological outflow enhancement by AIT. PMID:27227352

Multiphase flow calculation software

DOEpatents

Fincke, James R.

2003-04-15

Multiphase flow calculation software and computer-readable media carrying computer executable instructions for calculating liquid and gas phase mass flow rates of high void fraction multiphase flows. The multiphase flow calculation software employs various given, or experimentally determined, parameters in conjunction with a plurality of pressure differentials of a multiphase flow, preferably supplied by a differential pressure flowmeter or the like, to determine liquid and gas phase mass flow rates of the high void fraction multiphase flows. Embodiments of the multiphase flow calculation software are suitable for use in a variety of applications, including real-time management and control of an object system.

Beta-hydroxy-beta-methylbutyrate (HMB) stimulates myogenic cell proliferation, differentiation and survival via the MAPK/ERK and PI3K/Akt pathways.

PubMed

Kornasio, Reut; Riederer, Ingo; Butler-Browne, Gillian; Mouly, Vincent; Uni, Zehava; Halevy, Orna

2009-05-01

Beta-hydroxy-beta-methylbutyrate (HMB), a leucine catabolite, has been shown to prevent exercise-induced protein degradation and muscle damage. We hypothesized that HMB would directly regulate muscle-cell proliferation and differentiation and would attenuate apoptosis, the latter presumably underlying satellite-cell depletion during muscle degradation or atrophy. Adding various concentrations of HMB to serum-starved myoblasts induced cell proliferation and MyoD expression as well as the phosphorylation of MAPK/ERK. HMB induced differentiation-specific markers, increased IGF-I mRNA levels and accelerated cell fusion. Its inhibition of serum-starvation- or staurosporine-induced apoptosis was reflected by less apoptotic cells, reduced BAX expression and increased levels of Bcl-2 and Bcl-X. Annexin V staining and flow cytometry analysis showed reduced staurosporine-induced apoptosis in human myoblasts in response to HMB. HMB enhanced the association of the p85 subunit of PI3K with tyrosine-phosphorylated proteins. HMB elevated Akt phosphorylation on Thr308 and Ser473 and this was inhibited by Wortmannin, suggesting that HMB acts via Class I PI3K. Blocking of the PI3K/Akt pathway with specific inhibitors revealed its requirement in mediating the promotive effects of HMB on muscle cell differentiation and fusion. These direct effects of HMB on myoblast differentiation and survival resembling those of IGF-I, at least in culture, suggest its positive influence in preventing muscle wasting.

High degree of genetic differentiation in marine three-spined sticklebacks (Gasterosteus aculeatus).

PubMed

Defaveri, Jacquelin; Shikano, Takahito; Shimada, Yukinori; Merilä, Juha

2013-09-01

Populations of widespread marine organisms are typically characterized by a low degree of genetic differentiation in neutral genetic markers, but much less is known about differentiation in genes whose functional roles are associated with specific selection regimes. To uncover possible adaptive population divergence and heterogeneous genomic differentiation in marine three-spined sticklebacks (Gasterosteus aculeatus), we used a candidate gene-based genome-scan approach to analyse variability in 138 microsatellite loci located within/close to (<6 kb) functionally important genes in samples collected from ten geographic locations. The degree of genetic differentiation in markers classified as neutral or under balancing selection-as determined with several outlier detection methods-was low (F(ST) = 0.033 or 0.011, respectively), whereas average FST for directionally selected markers was significantly higher (F(ST) = 0.097). Clustering analyses provided support for genomic and geographic heterogeneity in selection: six genetic clusters were identified based on allele frequency differences in the directionally selected loci, whereas four were identified with the neutral loci. Allelic variation in several loci exhibited significant associations with environmental variables, supporting the conjecture that temperature and salinity, but not optic conditions, are important drivers of adaptive divergence among populations. In general, these results suggest that in spite of the high degree of physical connectivity and gene flow as inferred from neutral marker genes, marine stickleback populations are strongly genetically structured in loci associated with functionally relevant genes. © 2013 John Wiley & Sons Ltd.

DNS of High Pressure Supercritical Combustion

NASA Astrophysics Data System (ADS)

Chong, Shao Teng; Raman, Venkatramanan

2016-11-01

Supercritical flows have always been important to rocket motors, and more recently to aircraft engines and stationary gas turbines. The purpose of the present study is to understand effects of differential diffusion on reacting scalars using supercritical isotropic turbulence. Focus is on fuel and oxidant reacting in the transcritical region where density, heat capacity and transport properties are highly sensitive to variations in temperature and pressure. Reynolds and Damkohler number vary as a result and although it is common to neglect differential diffusion effects if Re is sufficiently large, this large variation in temperature with heat release can accentuate molecular transport differences. Direct numerical simulations (DNS) for one step chemistry reaction between fuel and oxidizer are used to examine the differential diffusion effects. A key issue investigated in this paper is if the flamelet progress variable approach, where the Lewis number is usually assumed to be unity and constant for all species, can be accurately applied to simulate supercritical combustion.

Large field-of-view and depth-specific cortical microvascular imaging underlies regional differences in ischemic brain

NASA Astrophysics Data System (ADS)

Qin, Jia; Shi, Lei; Dziennis, Suzan; Wang, Ruikang K.

2014-02-01

Ability to non-invasively monitor and quantify of blood flow, blood vessel morphology, oxygenation and tissue morphology is important for improved diagnosis, treatment and management of various neurovascular disorders, e.g., stroke. Currently, no imaging technique is available that can satisfactorily extract these parameters from in vivo microcirculatory tissue beds, with large field of view and sufficient resolution at defined depth without any harm to the tissue. In order for more effective therapeutics, we need to determine the area of brain that is damaged but not yet dead after focal ischemia. Here we develop an integrated multi-functional imaging system, in which SDW-LSCI (synchronized dual wavelength laser speckle imaging) is used as a guiding tool for OMAG (optical microangiography) to investigate the fine detail of tissue hemodynamics, such as vessel flow, profile, and flow direction. We determine the utility of the integrated system for serial monitoring afore mentioned parameters in experimental stroke, middle cerebral artery occlusion (MCAO) in mice. For 90 min MCAO, onsite and 24 hours following reperfusion, we use SDW-LSCI to determine distinct flow and oxygenation variations for differentiation of the infarction, peri-infarct, reduced flow and contralateral regions. The blood volumes are quantifiable and distinct in afore mentioned regions. We also demonstrate the behaviors of flow and flow direction in the arterials connected to MCA play important role in the time course of MCAO. These achievements may improve our understanding of vascular involvement under pathologic and physiological conditions, and ultimately facilitate clinical diagnosis, monitoring and therapeutic interventions of neurovascular diseases, such as ischemic stroke.

Misconceptions regarding basic thermodynamics and enzyme kinetics have led to erroneous conclusions regarding the metabolic importance of lactate dehydrogenase isoenzyme expression.

PubMed

Bak, Lasse K; Schousboe, Arne

2017-11-01

Lactate dehydrogenase (LDH) catalyzes the interconversion of pyruvate and lactate involving the coenzyme NAD + . Part of the foundation for the proposed shuttling of lactate from astrocytes to neurons during brain activation is the differential distribution of LDH isoenzymes between the two cell types. In this short review, we outline the basic kinetic properties of the LDH isoenzymes expressed in neurons and astrocytes, and argue that the distribution of LDH isoenzymes does not in any way govern directional flow of lactate between the two cellular compartments. The two main points are as follows. First, in line with the general concept of chemical catalysis, enzymes do not influence the thermodynamic equilibrium of a chemical reaction but merely the speed at which equilibrium is obtained. Thus, differential distribution of LDH isoenzymes with different kinetic parameters does not predict which cells are producing and which are consuming lactate. Second, the thermodynamic equilibrium of the reaction is toward the reduced substrate (i.e., lactate), which is reflected in the concentrations measured in brain tissue, suggesting that the reaction is at near-equilibrium at steady state. To conclude, the cellular distribution of LDH isoenzymes is of little if any consequence in determining any directional flow of lactate between neurons and astrocytes. © 2017 Wiley Periodicals, Inc. © 2017 Wiley Periodicals, Inc.

Differential determination of chromium(VI) and total chromium in natural waters using flow injection on-line separation and preconcentration electrothermal atomic absorption spectrometry.

PubMed

Sperling, M; Yin, X; Welz, B

1992-03-01

A rapid, sensitive and selective method for the differential determination of CrIII and CrVI in natural waters is described. Chromium(vi) can be determined directly by flow injection on-line sorbent extraction preconcentration coupled with electrothermal atomic absorption spectrometry using sodium diethyldithiocarbamate as the complexing agent and C18 bonded silica reversed-phase sorbent as the column material. Total Cr can be determined after oxidation of CrIII to CrVI by potassium peroxydisulfate. Chromium(III) can be calculated by difference. The optimum conditions for sorbent extraction of CrVI and oxidation of CrIII to CrVI are evaluated. A 12-fold enhancement in sensitivity compared with direct introduction of 40 microliters samples was achieved after preconcentration for 60 s, giving detection limits of 16 ng l-1 for CrVI and 18 ng l-1 for total Cr (based on 3 sigma). Results obtained for sea-water and river water reference materials were all within the certified range for total Cr with a precision of better than 10% relative standard deviation in the range 100-200 ng l-1. The selectivity of the determination of CrVI was evaluated by analysing spiked reference materials in the presence of CrIII, resulting in quantitative recovery of CrVI.

Solution of transonic flows by an integro-differential equation method

NASA Technical Reports Server (NTRS)

Ogana, W.

1978-01-01

Solutions of steady transonic flow past a two-dimensional airfoil are obtained from a singular integro-differential equation which involves a tangential derivative of the perturbation velocity potential. Subcritical flows are solved by taking central differences everywhere. For supercritical flows with shocks, central differences are taken in subsonic flow regions and backward differences in supersonic flow regions. The method is applied to a nonlifting parabolic-arc airfoil and to a lifting NACA 0012 airfoil. Results compare favorably with those of finite-difference schemes.

Numerical investigation of magnetohydrodynamic slip flow of power-law nanofluid with temperature dependent viscosity and thermal conductivity over a permeable surface

NASA Astrophysics Data System (ADS)

Hussain, Sajid; Aziz, Asim; Khalique, Chaudhry Masood; Aziz, Taha

2017-12-01

In this paper, a numerical investigation is carried out to study the effect of temperature dependent viscosity and thermal conductivity on heat transfer and slip flow of electrically conducting non-Newtonian nanofluids. The power-law model is considered for water based nanofluids and a magnetic field is applied in the transverse direction to the flow. The governing partial differential equations(PDEs) along with the slip boundary conditions are transformed into ordinary differential equations(ODEs) using a similarity technique. The resulting ODEs are numerically solved by using fourth order Runge-Kutta and shooting methods. Numerical computations for the velocity and temperature profiles, the skin friction coefficient and the Nusselt number are presented in the form of graphs and tables. The velocity gradient at the boundary is highest for pseudoplastic fluids followed by Newtonian and then dilatant fluids. Increasing the viscosity of the nanofluid and the volume of nanoparticles reduces the rate of heat transfer and enhances the thickness of the momentum boundary layer. The increase in strength of the applied transverse magnetic field and suction velocity increases fluid motion and decreases the temperature distribution within the boundary layer. Increase in the slip velocity enhances the rate of heat transfer whereas thermal slip reduces the rate of heat transfer.

Fourier Transform Mass Spectrometry and Nuclear Magnetic Resonance Analysis for the Rapid and Accurate Characterization of Hexacosanoylceramide.

PubMed

Ross, Charles W; Simonsick, William J; Bogusky, Michael J; Celikay, Recep W; Guare, James P; Newton, Randall C

2016-06-28

Ceramides are a central unit of all sphingolipids which have been identified as sites of biological recognition on cellular membranes mediating cell growth and differentiation. Several glycosphingolipids have been isolated, displaying immunomodulatory and anti-tumor activities. These molecules have generated considerable interest as potential vaccine adjuvants in humans. Accurate analyses of these and related sphingosine analogues are important for the characterization of structure, biological function, and metabolism. We report the complementary use of direct laser desorption ionization (DLDI), sheath flow electrospray ionization (ESI) Fourier transform ion cyclotron resonance mass spectrometry (FTICR MS) and high-field nuclear magnetic resonance (NMR) analysis for the rapid, accurate identification of hexacosanoylceramide and starting materials. DLDI does not require stringent sample preparation and yields representative ions. Sheath-flow ESI yields ions of the product and byproducts and was significantly better than monospray ESI due to improved compound solubility. Negative ion sheath flow ESI provided data of starting materials and products all in one acquisition as hexacosanoic acid does not ionize efficiently when ceramides are present. NMR provided characterization of these lipid molecules complementing the results obtained from MS analyses. NMR data was able to differentiate straight chain versus branched chain alkyl groups not easily obtained from mass spectrometry.

Body and brain temperature coupling: the critical role of cerebral blood flow

PubMed Central

Ackerman, Joseph J. H.; Yablonskiy, Dmitriy A.

2010-01-01

Direct measurements of deep-brain and body-core temperature were performed on rats to determine the influence of cerebral blood flow (CBF) on brain temperature regulation under static and dynamic conditions. Static changes of CBF were achieved using different anesthetics (chloral hydrate, CH; α-chloralose, αCS; and isoflurane, IF) with αCS causing larger decreases in CBF than CH and IF; dynamic changes were achieved by inducing transient hypercapnia (5% CO2 in 40% O2 and 55% N2). Initial deep-brain/body-core temperature differentials were anesthetic-type dependent with the largest differential observed with rats under αCS anesthesia (ca. 2°C). Hypercapnia induction raised rat brain temperature under all three anesthesia regimes, but by different anesthetic-dependent amounts correlated with the initial differentials—αCS anesthesia resulted in the largest brain temperature increase (0.32 ± 0.08°C), while CH and IF anesthesia lead to smaller increases (0.12 ± 0.03 and 0.16 ± 0.05°C, respectively). The characteristic temperature transition time for the hypercapnia-induced temperature increase was 2–3 min under CH and IF anesthesia and ~4 min under αCS anesthesia. We conclude that both, the deep-brain/body-core temperature differential and the characteristic temperature transition time correlate with CBF: a lower CBF promotes higher deep-brain/body-core temperature differentials and, upon hypercapnia challenge, longer characteristic transition times to increased temperatures. PMID:19277681

Hydrothermal Circulation Within and Between Basement Outcrops on a Young Ridge Flank: Numerical Models and Thermal Constraints

NASA Astrophysics Data System (ADS)

Hutnak, M.; Fisher, A. T.; Stauffer, P.; Gable, C. W.

2005-12-01

We use two-dimensional, finite-element models of coupled heat and fluid flow to investigate local and large-scale heat and fluid transport around and between basement outcrops on a young ridge flank. System geometries and properties are based on observations and measurements on the 3.4-3.6 Ma eastern flank of the Juan de Fuca Ridge. A small area of basement exposure (Baby Bare outcrop) experiences focused hydrothermal discharge, whereas a much larger feature (Grizzly Bare outcrop) 50 km to the south is a site of hydrothermal recharge. Observations of seafloor heat flow, subseafloor pressures, and basement fluid geochemistry at and near these outcrops constrain acceptable model results. Single-outcrop simulations suggest that local convection alone (represented by a high Nusselt number proxy) cannot explain the near-outcrop heat flow patterns; rapid through-flow is required. Venting of at least 5 L/s through the smaller outcrop, a volumetric flow rate consistent with earlier estimates based on plume and outcrop measurements, is needed to match seafloor heat flow patterns. Heat flow patterns are more variable and complex near the larger, recharging outcrop. Simulations that include 5-20 L/s of recharge through this feature can replicate first-order trends in the data, but small-scale variations are likely to result from heterogeneous flow paths and vigorous, local convection. Two-outcrop simulations started with a warm hydrostatic initial condition, based on a conductive model, result in rapid fluid flow from the smaller outcrop to the larger outcrop, inconsistent with observations. Flow can be sustained in the opposite (correct) direction if it is initially forced, which generates a hydrothermal siphon between the two features. Free flow simulations maintain rapid circulation at rates consistent with observations (specific discharge of m/yr to tens of m/yr), provided basement permeability is on the order of 10-10 m2 or greater. Lateral flow rates scale inversely with the thickness of the permeable basement layer. The differential pressure needed to drive this circulation, created by the siphon, is on the order of tens to hundreds of kPa, with greater differential pressure needed when basement permeability is lower.

Quaking Is a Key Regulator of Endothelial Cell Differentiation, Neovascularization, and Angiogenesis

PubMed Central

Cochrane, Amy; Kelaini, Sophia; Tsifaki, Marianna; Bojdo, James; Vilà‐González, Marta; Drehmer, Daiana; Caines, Rachel; Magee, Corey; Eleftheriadou, Magdalini; Hu, Yanhua; Grieve, David; Stitt, Alan W.; Zeng, Lingfang; Xu, Qingbo

2017-01-01

Abstract The capability to derive endothelial cell (ECs) from induced pluripotent stem cells (iPSCs) holds huge therapeutic potential for cardiovascular disease. This study elucidates the precise role of the RNA‐binding protein Quaking isoform 5 (QKI‐5) during EC differentiation from both mouse and human iPSCs (hiPSCs) and dissects how RNA‐binding proteins can improve differentiation efficiency toward cell therapy for important vascular diseases. iPSCs represent an attractive cellular approach for regenerative medicine today as they can be used to generate patient‐specific therapeutic cells toward autologous cell therapy. In this study, using the model of iPSCs differentiation toward ECs, the QKI‐5 was found to be an important regulator of STAT3 stabilization and vascular endothelial growth factor receptor 2 (VEGFR2) activation during the EC differentiation process. QKI‐5 was induced during EC differentiation, resulting in stabilization of STAT3 expression and modulation of VEGFR2 transcriptional activation as well as VEGF secretion through direct binding to the 3′ UTR of STAT3. Importantly, mouse iPS‐ECs overexpressing QKI‐5 significantly improved angiogenesis and neovascularization and blood flow recovery in experimental hind limb ischemia. Notably, hiPSCs overexpressing QKI‐5, induced angiogenesis on Matrigel plug assays in vivo only 7 days after subcutaneous injection in SCID mice. These results highlight a clear functional benefit of QKI‐5 in neovascularization, blood flow recovery, and angiogenesis. Thus, they provide support to the growing consensus that elucidation of the molecular mechanisms underlying EC differentiation will ultimately advance stem cell regenerative therapy and eventually make the treatment of cardiovascular disease a reality. The RNA binding protein QKI‐5 is induced during EC differentiation from iPSCs. RNA binding protein QKI‐5 was induced during EC differentiation in parallel with the EC marker CD144. Immunofluorescence staining showing that QKI‐5 is localized in the nucleus and stained in parallel with CD144 in differentiated ECs (scale bar = 50 µm). stem cells 2017 Stem Cells 2017;35:952–966 PMID:28207177

Learning partial differential equations via data discovery and sparse optimization

NASA Astrophysics Data System (ADS)

Schaeffer, Hayden

2017-01-01

We investigate the problem of learning an evolution equation directly from some given data. This work develops a learning algorithm to identify the terms in the underlying partial differential equations and to approximate the coefficients of the terms only using data. The algorithm uses sparse optimization in order to perform feature selection and parameter estimation. The features are data driven in the sense that they are constructed using nonlinear algebraic equations on the spatial derivatives of the data. Several numerical experiments show the proposed method's robustness to data noise and size, its ability to capture the true features of the data, and its capability of performing additional analytics. Examples include shock equations, pattern formation, fluid flow and turbulence, and oscillatory convection.

Preliminary Test Results of a Non-Contacting Finger Seal on a Herringbone-Grooved Rotor

NASA Technical Reports Server (NTRS)

Proctor, Margaret P.; Degado, Irebert R.

2008-01-01

Low leakage, non-contacting finger seals have potential to reduce gas turbine engine specific fuel consumption by 2 to 3 percent and to reduce direct operating costs by increasing the time between engine overhauls. A non-contacting finger seal with concentric lift-pads operating adjacent to a test rotor with herringbone grooves was statically tested at 300, 533, and 700 K inlet air temperatures at pressure differentials up to 576 kPa. Leakage flow factors were approximately 70 percent less than state-of-the-art labyrinth seals. Leakage rates are compared to first order predictions. Initial spin tests at 5000 rpm, 300 K inlet air temperature and pressure differentials to 241 kPa produced no measurable wear.

Learning partial differential equations via data discovery and sparse optimization.

PubMed

Schaeffer, Hayden

2017-01-01

We investigate the problem of learning an evolution equation directly from some given data. This work develops a learning algorithm to identify the terms in the underlying partial differential equations and to approximate the coefficients of the terms only using data. The algorithm uses sparse optimization in order to perform feature selection and parameter estimation. The features are data driven in the sense that they are constructed using nonlinear algebraic equations on the spatial derivatives of the data. Several numerical experiments show the proposed method's robustness to data noise and size, its ability to capture the true features of the data, and its capability of performing additional analytics. Examples include shock equations, pattern formation, fluid flow and turbulence, and oscillatory convection.

Learning partial differential equations via data discovery and sparse optimization

PubMed Central

2017-01-01

We investigate the problem of learning an evolution equation directly from some given data. This work develops a learning algorithm to identify the terms in the underlying partial differential equations and to approximate the coefficients of the terms only using data. The algorithm uses sparse optimization in order to perform feature selection and parameter estimation. The features are data driven in the sense that they are constructed using nonlinear algebraic equations on the spatial derivatives of the data. Several numerical experiments show the proposed method's robustness to data noise and size, its ability to capture the true features of the data, and its capability of performing additional analytics. Examples include shock equations, pattern formation, fluid flow and turbulence, and oscillatory convection. PMID:28265183

Extensive massive basal-ice structures in West Antarctica relate to ice-sheet anisotropy and ice-flow

NASA Astrophysics Data System (ADS)

Ross, N.; Bingham, R. G.; Corr, H. F. J.; Siegert, M. J.

2016-12-01

Complex structures identified within both the East Antarctic and Greenland ice sheets are thought to be generated by the action of basal water freezing to the ice-sheet base, evolving under ice flow. Here, we use ice-penetrating radar to image an extensive series of similarly complex basal ice facies in West Antarctica, revealing a thick (>500 m) tectonised unit in an area of cold-based and relatively slow-flowing ice. We show that major folding and overturning of the unit perpendicular to ice flow elevates deep, warm ice into the mid ice-sheet column. Fold axes align with present ice flow, and axis amplitudes increase down-ice, suggesting long-term consistency in the direction and convergence of flow. In the absence of basal water, and the draping of the tectonised unit over major subglacial mountain ranges, the formation of the unit must be solely through the deformation of meteoric ice. Internal layer radar reflectivity is consistently greater parallel to flow compared with the perpendicular direction, revealing ice-sheet crystal anisotropy is associated with the folding. By linking layers to the Byrd ice-core site, we show the basal ice dates to at least the last glacial cycle and may be as old as the last interglacial. Deformation of deep-ice in this sector of WAIS, and potentially elsewhere in Antarctica, may be caused by differential shearing at interglacial-glacial boundaries, in a process analogous to that proposed for interior Greenland. The scale and heterogeneity of the englacial structures, and their subsequent impact on ice sheet rheology, means that the nature of ice flow across the bulk of West Antarctica must be far more complex that is currently accounted for by any numerical ice sheet model.

Estimating zero-g flow rates in open channels having capillary pumping vanes

NASA Astrophysics Data System (ADS)

Srinivasan, Radhakrishnan

2003-02-01

In vane-type surface tension propellant management devices (PMD) commonly used in satellite fuel tanks, the propellant is transported along guiding vanes from a reservoir at the inlet of the device to a sump at the outlet from where it is pumped to the satellite engine. The pressure gradient driving this free-surface flow under zero-gravity (zero-g) conditions is generated by surface tension and is related to the differential curvatures of the propellant-gas interface at the inlet and outlet of the PMD. A new semi-analytical procedure is prescribed for accurately calculating the extremely small fuel flow rates under reasonably idealized conditions. Convergence of the algorithm is demonstrated by detailed numerical calculations. Owing to the substantial cost and the technical hurdles involved in accurately estimating these minuscule flow rates by either direct numerical simulation or by experimental methods which simulate zero-g conditions in the lab, it is expected that the proposed method will be an indispensable tool in the design and operation of satellite fuel tanks.

PEVC-FMDF for Large Eddy Simulation of Compressible Turbulent Flows

NASA Astrophysics Data System (ADS)

Nouri Gheimassi, Arash; Nik, Mehdi; Givi, Peyman; Livescu, Daniel; Pope, Stephen

2017-11-01

The filtered density function (FDF) closure is extended to a ``self-contained'' format to include the subgrid scale (SGS) statistics of all of the hydro-thermo-chemical variables in turbulent flows. These are the thermodynamic pressure, the specific internal energy, the velocity vector, and the composition field. In this format, the model is comprehensive and facilitates large eddy simulation (LES) of flows at both low and high compressibility levels. A transport equation is developed for the joint ``pressure-energy-velocity-composition filtered mass density function (PEVC-FMDF).'' In this equation, the effect of convection appears in closed form. The coupling of the hydrodynamics and thermochemistry is modeled via a set of stochastic differential equation (SDE) for each of the transport variables. This yields a self-contained SGS closure. For demonstration, LES is conducted of a turbulent shear flow with transport of a passive scalar. The consistency of the PEVC-FMDF formulation is established, and its overall predictive capability is appraised via comparison with direct numerical simulation (DNS) data.

EDDA: integrated simulation of debris flow erosion, deposition and property changes

NASA Astrophysics Data System (ADS)

Chen, H. X.; Zhang, L. M.

2014-11-01

Debris flow material properties change during the initiation, transportation and deposition processes, which influences the runout characteristics of the debris flow. A quasi-three-dimensional depth-integrated numerical model, EDDA, is presented in this paper to simulate debris flow erosion, deposition and induced material property changes. The model considers changes in debris flow density, yield stress and dynamic viscosity during the flow process. The yield stress of debris flow mixture is determined at limit equilibrium using the Mohr-Coulomb equation, which is applicable to clear water flow, hyper-concentrated flow and fully developed debris flow. To assure numerical stability and computational efficiency at the same time, a variable time stepping algorithm is developed to solve the governing differential equations. Four numerical tests are conducted to validate the model. The first two tests involve a one-dimensional dam-break water flow and a one-dimensional debris flow with constant properties. The last two tests involve erosion and deposition, and the movement of multi-directional debris flows. The changes in debris flow mass and properties due to either erosion or deposition are shown to affect the runout characteristics significantly. The model is also applied to simulate a large-scale debris flow in Xiaojiagou Ravine to test the performance of the model in catchment-scale simulations. The results suggest that the model estimates well the volume, inundated area, and runout distance of the debris flow. The model is intended for use as a module in a real-time debris flow warning system.

Fluidic angular velocity sensor

NASA Technical Reports Server (NTRS)

Berdahl, C. M. (Inventor)

1986-01-01

A fluidic sensor providing a differential pressure signal proportional to the angular velocity of a rotary input is described. In one embodiment the sensor includes a fluid pump having an impeller coupled to a rotary input. A housing forming a constricting fluid flow chamber is connected to the fluid input of the pump. The housing is provided with a fluid flow restrictive input to the flow chamber and a port communicating with the interior of the flow chamber. The differential pressure signal measured across the flow restrictive input is relatively noise free and proportional to the square of the angular velocity of the impeller. In an alternative embodiment, the flow chamber has a generally cylindrical configuration and plates having flow restrictive apertures are disposed within the chamber downstream from the housing port. In this embodiment, the differential pressure signal is found to be approximately linear with the angular velocity of the impeller.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Isa, Sharena Mohamad; Ali, Anati

In this paper, the hydromagnetic flow of dusty fluid over a vertical stretching sheet with thermal radiation is investigated. The governing partial differential equations are reduced to nonlinear ordinary differential equations using similarity transformation. These nonlinear ordinary differential equations are solved numerically using Runge-Kutta Fehlberg fourth-fifth order method (RKF45 Method). The behavior of velocity and temperature profiles of hydromagnetic fluid flow of dusty fluid is analyzed and discussed for different parameters of interest such as unsteady parameter, fluid-particle interaction parameter, the magnetic parameter, radiation parameter and Prandtl number on the flow.

Energy measurement using flow computers and chromatography

DOE Office of Scientific and Technical Information (OSTI.GOV)

Beeson, J.

1995-12-01

Arkla Pipeline Group (APG), along with most transmission companies, went to electronic flow measurement (EFM) to: (1) Increase resolution and accuracy; (2) Real time correction of flow variables; (3) Increase speed in data retrieval; (4) Reduce capital expenditures; and (5) Reduce operation and maintenance expenditures Prior to EFM, mechanical seven day charts were used which yielded 800 pressure and differential pressure readings. EFM yields 1.2-million readings, a 1500 time improvement in resolution and additional flow representation. The total system accuracy of the EFM system is 0.25 % compared with 2 % for the chart system which gives APG improved accuracy.more » A typical APG electronic measurement system includes a microprocessor-based flow computer, a telemetry communications package, and a gas chromatograph. Live relative density (specific gravity), BTU, CO{sub 2}, and N{sub 2} are updated from the chromatograph to the flow computer every six minutes which provides accurate MMBTU computations. Because the gas contract length has changed from years to monthly and from a majority of direct sales to transports both Arkla and its customers wanted access to actual volumes on a much more timely basis than is allowed with charts. The new electronic system allows volumes and other system data to be retrieved continuously, if EFM is on Supervisory Control and Data Acquisition (SCADA) or daily if on dial up telephone. Previously because of chart integration, information was not available for four to six weeks. EFM costs much less than the combined costs of telemetry transmitters, pressure and differential pressure chart recorders, and temperature chart recorder which it replaces. APG will install this equipment on smaller volume stations at a customers expense. APG requires backup measurement on metering facilities this size. It could be another APG flow computer or chart recorder, or the other companies flow computer or chart recorder.« less

Viscosity-adjusted estimation of pressure head and pump flow with quasi-pulsatile modulation of rotary blood pump for a total artificial heart.

PubMed

Yurimoto, Terumi; Hara, Shintaro; Isoyama, Takashi; Saito, Itsuro; Ono, Toshiya; Abe, Yusuke

2016-09-01

Estimation of pressure and flow has been an important subject for developing implantable artificial hearts. To realize real-time viscosity-adjusted estimation of pressure head and pump flow for a total artificial heart, we propose the table estimation method with quasi-pulsatile modulation of rotary blood pump in which systolic high flow and diastolic low flow phased are generated. The table estimation method utilizes three kinds of tables: viscosity, pressure and flow tables. Viscosity is estimated from the characteristic that differential value in motor speed between systolic and diastolic phases varies depending on viscosity. Potential of this estimation method was investigated using mock circulation system. Glycerin solution diluted with salty water was used to adjust viscosity of fluid. In verification of this method using continuous flow data, fairly good estimation could be possible when differential pulse width modulation (PWM) value of the motor between systolic and diastolic phases was high. In estimation under quasi-pulsatile condition, inertia correction was provided and fairly good estimation was possible when the differential PWM value was high, which was not different from the verification results using continuous flow data. In the experiment of real-time estimation applying moving average method to the estimated viscosity, fair estimation could be possible when the differential PWM value was high, showing that real-time viscosity-adjusted estimation of pressure head and pump flow would be possible with this novel estimation method when the differential PWM value would be set high.

Optimizing the longitudinal and transverse electroosmotic pumping in a rectangular channel with horizontal baffle plates

NASA Astrophysics Data System (ADS)

Lai, Anison K. R.; Chang, Chien-Cheng; Wang, Chang-Yi

2018-04-01

This paper presents a continued study to our previous work on electroosmotic (EO) flow in a channel with vertical baffle plates by further investigating EO flow through an array of baffle plates arranged in parallel to the channel walls. The flow may be driven either in the direction along or in the direction transverse to the plates, thus distinguishing the longitudinal EO pumping (LEOP) and the transverse EO pumping (TEOP). In both types of EO pumping, it is more interesting to examine the cases when the baffle plates develop a higher zeta potential (denoted by α) than that on the channel walls (β). This semi-analytical study enables us to compare between LEOP and TEOP in the pumping efficiency under similar conditions. The TEOP case is more difficult to solve due to the higher order governing partial differential equations caused by the induced non-uniform pressure gradient distribution. In particular, we examine how the EO pumping rates deviate from those predicted by the Helmholtz-Smoluchowski velocity and illustrate the general trend of optimizing the EO pumping rates with respect to the physical and geometric parameters involved.

Water flows in the Spanish economy: agri-food sectors, trade and households diets in an input-output framework.

PubMed

Cazcarro, Ignacio; Duarte, Rosa; Sánchez-Chóliz, Julio

2012-06-19

Seeking to advance our knowledge of water flows and footprints and the factors underlying them, we apply, on the basis of an extended 2004 Social Accounting Matrix for Spain, an open Leontief model in which households and foreign trade are the exogenous accounts. The model shows the water embodied in products bought by consumers (which we identify with the Water Footprint) and in trade (identified with virtual water trade). Activities with relevant water inflows and outflows such as the agrarian sector, textiles, and the agri-food industry are examined in detail using breakdowns of the relevant accounts. The data reflect only physical consumption, differentiating between green and blue water. The results reveal that Spain is a net importer of water. Flows are then related to key trading partners to show the large quantities involved. The focus on embodied (or virtual) water by activity is helpful to distinguish indirect from direct consumption as embodied water can be more than 300 times direct consumption in some food industry activities. Finally, a sensitivity analysis applied to changes in diets shows the possibility of reducing water uses by modifying households' behavior to encourage healthier eating.

An Exact Dual Adjoint Solution Method for Turbulent Flows on Unstructured Grids

NASA Technical Reports Server (NTRS)

Nielsen, Eric J.; Lu, James; Park, Michael A.; Darmofal, David L.

2003-01-01

An algorithm for solving the discrete adjoint system based on an unstructured-grid discretization of the Navier-Stokes equations is presented. The method is constructed such that an adjoint solution exactly dual to a direct differentiation approach is recovered at each time step, yielding a convergence rate which is asymptotically equivalent to that of the primal system. The new approach is implemented within a three-dimensional unstructured-grid framework and results are presented for inviscid, laminar, and turbulent flows. Improvements to the baseline solution algorithm, such as line-implicit relaxation and a tight coupling of the turbulence model, are also presented. By storing nearest-neighbor terms in the residual computation, the dual scheme is computationally efficient, while requiring twice the memory of the flow solution. The scheme is expected to have a broad impact on computational problems related to design optimization as well as error estimation and grid adaptation efforts.

Mixed convective stagnation point flow of nanofluid with Darcy-Fochheimer relation and partial slip

NASA Astrophysics Data System (ADS)

Hayat, Tasawar; Ijaz, Misbah; Qayyum, Sumaira; Ayub, Muhammad; Alsaedi, Ahmed

2018-06-01

Here axisymmetric mixed convective, stagnation point flow of electrically conducting nanofluid by a permeable cylinder is examined. Magnetic field in transverse direction is applied. The Darcy-Forchheimer relation is accounted to specify the flow nature in porous medium. Formulation of mathematical model is given by using Tiwari-Das nanofluid model. The velocity and thermal slip conditions.are taken. This whole communication comprises water as a base fluid with nano-sized particles (Aluminum oxide, Copper and Titanium Oxide). The nonlinear coupled ordinary differential equations are obtained after using appropriate transformations. The convergent series solution of nonlinear system is accomplished by homotopic approach. The nondimensional velocity and temperature curve are examined under the impact of physical parameters like the nanoparticle volume fraction, permeability parameter, curvature parameter, the magnetic parameter and the mixed convection parameter. Numeric values of coefficient of skin friction and Nusselt number are analyzed.

Cattaneo-Christov Heat Flux Model for MHD Three-Dimensional Flow of Maxwell Fluid over a Stretching Sheet.

PubMed

Rubab, Khansa; Mustafa, M

2016-01-01

This letter investigates the MHD three-dimensional flow of upper-convected Maxwell (UCM) fluid over a bi-directional stretching surface by considering the Cattaneo-Christov heat flux model. This model has tendency to capture the characteristics of thermal relaxation time. The governing partial differential equations even after employing the boundary layer approximations are non linear. Accurate analytic solutions for velocity and temperature distributions are computed through well-known homotopy analysis method (HAM). It is noticed that velocity decreases and temperature rises when stronger magnetic field strength is accounted. Penetration depth of temperature is a decreasing function of thermal relaxation time. The analysis for classical Fourier heat conduction law can be obtained as a special case of the present work. To our knowledge, the Cattaneo-Christov heat flux model law for three-dimensional viscoelastic flow problem is just introduced here.

A study of high alpha dynamics and flow visualization for a 2.5-percent model of the F-18 HARV undergoing wing rock

NASA Technical Reports Server (NTRS)

Quast, Thomas; Nelson, Robert C.; Fisher, David F.

1991-01-01

Free-to-roll experiments and flow visualization studies have been conducted for a 2.5-percent model of the F-18 undergoing unsteady wing rock oscillations. Data have been acquired in the form of roll angle time histories as well as video recordings and 35 mm photography of the forebody and leading edge extension vortices. The time histories were differentiated to produce angular velocity and angular acceleration. From this the roll moment as a function of time and/or roll angle could be estimated. A thorough analysis of the data has revealed a genuine wing-rock phenomenon. Off-surface flow visualization was used to identiify the forebody and LEX vortex core positions and their interaction in both static and dynamic configurations. A direct correlation between the dynamic data and visualized vortex activity during the wing-rock motion has been made.

Toward a generalized equation for the Reynolds stress: Turbulence momentum balance in non-canonical flows

NASA Astrophysics Data System (ADS)

Lee, T.-W.

2017-11-01

Recently, we developed a theoretical basis for determination of the Reynolds stress in canonical flows. Writing momentum balance for a control volume moving at the local mean velocity, along with a differential transform ∂/∂x =C1 U∂/∂y , a turbulence momentum balance is discovered which includes the Reynolds stress as a function of root turbulence parameters: ∂(u'v')/∂y = -C1 U∂u'2/∂y +νm∂2urms'/∂y2 . Then, the Reynolds stress can simply be computed by integrating in the y-direction using the right-hand side (RHS). This is obviously a far simplification of complex modeling of the Reynolds stress, but contains the correct physics, as borne out by comparisons with experimental and DNS data in canonical flows in our earlier works (e.g. in APS 2016). The RHS contains only two parameters, U and u'. In this work, we seek extensions of this solution to non-canonical flows such as wakes, flow over a step, and mixing layers. Comparisons with experimental and DNS data will be presented.

Measuring Viscosities of Gases at Atmospheric Pressure

NASA Technical Reports Server (NTRS)

Singh, Jag J.; Mall, Gerald H.; Hoshang, Chegini

1987-01-01

Variant of general capillary method for measuring viscosities of unknown gases based on use of thermal mass-flowmeter section for direct measurement of pressure drops. In technique, flowmeter serves dual role, providing data for determining volume flow rates and serving as well-characterized capillary-tube section for measurement of differential pressures across it. New method simple, sensitive, and adaptable for absolute or relative viscosity measurements of low-pressure gases. Suited for very complex hydrocarbon mixtures where limitations of classical theory and compositional errors make theoretical calculations less reliable.

Investigation of compressible vortex flow characteristics

NASA Technical Reports Server (NTRS)

Muirhead, V. U.

1977-01-01

The nature of intense air vortices was studied and the factors which determine the intensity and rate of decay of both single and pairs of vortices were investigated. Vortex parameters of axial pressure differential, circulation, outflow rates, separation distance and directions of rotation were varied. Unconfined vortices, generated by a single rotating cage, were intensified by an increasing axial pressure gradient. Breakdown occurred when the axial gradient became negligible. The core radius was a function of the axial gradient. Dual vortices, generated by two counterrotating cages, rotated opposite to the attached cages. With minimum spacing only one vortex was formed which rotated in a direction opposite to the attached cage. When one cage rotated at half the speed of the other cage, one vortex formed at the higher speed cage rotating in the cage direction.

Thermal analysis of a reactive generalized Couette flow of power law fluids between concentric cylindrical pipes

NASA Astrophysics Data System (ADS)

Makinde, O. D.

2014-12-01

In this paper, the steady generalized axial Couette flow of Ostwald-de Waele power law reactive fluids between concentric cylindrical pipes is investigated. It is assumed that the outer cylinder is stationary and exchanges heat with the ambient surrounding following Newton's law of cooling, while the inner cylinder with isothermal surface is set in motion in the axial direction. The model nonlinear differential equations for the momentum and energy balance are obtained and tackled numerically using the shooting method coupled with the Runge-Kutta-Fehlberg integration technique. The effects of various embedded thermophysical parameters on the velocity and temperature fields including skin friction, Nusselt number and thermal criticality conditions are presented graphically and discussed quantitatively.

Cosmic-ray streaming and anisotropies

NASA Technical Reports Server (NTRS)

Forman, M. A.; Gleeson, L. J.

1975-01-01

The paper is concerned with the differential current densities and anisotropies that exist in the interplanetary cosmic-ray gas, and in particular with a correct formulation and simple interpretation of the momentum equation that describes these on a local basis. Two examples of the use of this equation in the interpretation of previous data are given. It is demonstrated that in interplanetary space, the electric-field drifts and convective flow parallel to the magnetic field of cosmic-ray particles combine as a simple convective flow with the solar wind, and that there exist diffusive currents and transverse gradient drift currents. Thus direct reference to the interplanetary electric-field drifts is eliminated, and the study of steady-state and transient cosmic-ray anisotropies is both more systematic and simpler.

Water-Rock Differentiation of Icy Bodies by Darcy law, Stokes law, and Two-Phase Flow

NASA Astrophysics Data System (ADS)

Neumann, Wladimir; Breuer, Doris; Spohn, Tilman

2016-10-01

The early Solar system produced a variety of bodies with different properties. Among the small bodies, objects that contain notable amounts of water ice are of particular interest. Water-rock separation on such worlds is probable and has been confirmed in some cases. We couple accretion and water-rock separation in a numerical model. The model is applicable to Ceres, icy satellites, and Kuiper belt objects, and is suited to assess the thermal metamorphism of the interior and the present-day internal structures. The relative amount of ice determines the differentiation regime according to porous flow or Stokes flow. Porous flow considers differentiation in a rock matrix with a small degree of ice melting and is typically modelled either with the Darcy law or two-phase flow. We find that for small icy bodies two-phase flow differs from the Darcy law. Velocities derived from two-phase flow are at least one order of magnitude smaller than Darcy velocities. The latter do not account for the matrix resistance against the deformation and overestimate the separation velocity. In the Stokes regime that should be used for large ice fractions, differentiation is at least four orders of magnitude faster than porous flow with the parameters used here.

[An attempt to explain fertility differentials in Upper Volta and in Ghana].

PubMed

Coulibaly, S P; Pool, I

1975-01-01

This study examines fertility differentials in Western Africa, notably in Upper Volta and in Ghana. The relationship between social and cultural transformation and fertility rate is usually seen as a matter of cause and effect. Direct variables caused by social transformation would be education, migration, and urbanization. This is not necessarily so, at least according to the Davis-Blake paradigm, which says that there are intermediate variables which intervene between fertility rate and the social system. For West Africa such variables are of 3 distinct types: 1) those which upset the normal flow of the family, such as separation due to migration, divorce, and marriage age; 2) those which influence conception itself, such as birth control, lactation and sexual abstinence; and, 3) cultural factors, such as poligamy and monogamy, type of conjugal union, and postpartum sexual abstinence. The central point of this study is that direct variables, i.e. migration, education and urbanization, do not directly influence fertility, but they influence the so-called intermediate variables, which, in turn, cause a change in fertility patterns. It must be remembered that birth control is still practically unknown in Western Africa.

Inferring functional connectivity in MRI using Bayesian network structure learning with a modified PC algorithm

PubMed Central

Iyer, Swathi; Shafran, Izhak; Grayson, David; Gates, Kathleen; Nigg, Joel; Fair, Damien

2013-01-01

Resting state functional connectivity MRI (rs-fcMRI) is a popular technique used to gauge the functional relatedness between regions in the brain for typical and special populations. Most of the work to date determines this relationship by using Pearson's correlation on BOLD fMRI timeseries. However, it has been recognized that there are at least two key limitations to this method. First, it is not possible to resolve the direct and indirect connections/influences. Second, the direction of information flow between the regions cannot be differentiated. In the current paper, we follow-up on recent work by Smith et al (2011), and apply a Bayesian approach called the PC algorithm to both simulated data and empirical data to determine whether these two factors can be discerned with group average, as opposed to single subject, functional connectivity data. When applied on simulated individual subjects, the algorithm performs well determining indirect and direct connection but fails in determining directionality. However, when applied at group level, PC algorithm gives strong results for both indirect and direct connections and the direction of information flow. Applying the algorithm on empirical data, using a diffusion-weighted imaging (DWI) structural connectivity matrix as the baseline, the PC algorithm outperformed the direct correlations. We conclude that, under certain conditions, the PC algorithm leads to an improved estimate of brain network structure compared to the traditional connectivity analysis based on correlations. PMID:23501054

Microbioreactor Arrays for Full Factorial Screening of Exogenous and Paracrine Factors in Human Embryonic Stem Cell Differentiation

PubMed Central

Titmarsh, Drew M.; Hudson, James E.; Hidalgo, Alejandro; Elefanty, Andrew G.; Stanley, Edouard G.; Wolvetang, Ernst J.; Cooper-White, Justin J.

2012-01-01

Timed exposure of pluripotent stem cell cultures to exogenous molecules is widely used to drive differentiation towards desired cell lineages. However, screening differentiation conditions in conventional static cultures can become impractical in large parameter spaces, and is intrinsically limited by poor spatiotemporal control of the microenvironment that also makes it impossible to determine whether exogenous factors act directly or through paracrine-dependent mechanisms. We detail here the development of a continuous flow microbioreactor array platform that combines full-factorial multiplexing of input factors with progressive accumulation of paracrine factors through serially-connected culture chambers, and further, the use of this system to explore the combinatorial parameter space of both exogenous and paracrine factors involved in human embryonic stem cell (hESC) differentiation to a MIXL1-GFP+ primitive streak-like population. We show that well known inducers of primitive streak (BMP, Activin and Wnt signals) do not simply act directly on hESC to induce MIXL1 expression, but that this requires accumulation of surplus, endogenous factors; and, that conditioned medium or FGF-2 supplementation is able to offset this. Our approach further reveals the presence of a paracrine, negative feedback loop to the MIXL1-GFP+ population, which can be overcome with GSK-3β inhibitors (BIO or CHIR99021), implicating secreted Wnt inhibitory signals such as DKKs and sFRPs as candidate effectors. Importantly, modulating paracrine effects identified in microbioreactor arrays by supplementing FGF-2 and CHIR in conventional static culture vessels resulted in improved differentiation outcomes. We therefore demonstrate that this microbioreactor array platform uniquely enables the identification and decoding of complex soluble factor signalling hierarchies, and that this not only challenges prevailing strategies for extrinsic control of hESC differentiation, but also is translatable to conventional culture systems. PMID:23300662

X-ray Microtomography of Intermittency in Multiphase Flow at Steady State Using a Differential Imaging Method

NASA Astrophysics Data System (ADS)

Gao, Ying; Lin, Qingyang; Bijeljic, Branko; Blunt, Martin J.

2017-12-01

We imaged the steady state flow of brine and decane in Bentheimer sandstone. We devised an experimental method based on differential imaging to examine how flow rate impacts impact the pore-scale distribution of fluids during coinjection. This allows us to elucidate flow regimes (connected, or breakup of the nonwetting phase pathways) for a range of fractional flows at two capillary numbers, Ca, namely 3.0 × 10-7 and 7.5 × 10-6. At the lower Ca, for a fixed fractional flow, the two phases appear to flow in connected unchanging subnetworks of the pore space, consistent with conventional theory. At the higher Ca, we observed that a significant fraction of the pore space contained sometimes oil and sometimes brine during the 1 h scan: this intermittent occupancy, which was interpreted as regions of the pore space that contained both fluid phases for some time, is necessary to explain the flow and dynamic connectivity of the oil phase; pathways of always oil-filled portions of the void space did not span the core. This phase was segmented from the differential image between the 30 wt % KI brine image and the scans taken at each fractional flow. Using the grey scale histogram distribution of the raw images, the oil proportion in the intermittent phase was calculated. The pressure drops at each fractional flow at low and high flow rates were measured by high-precision differential pressure sensors. The relative permeabilities and fractional flow obtained by our experiment at the mm-scale compare well with data from the literature on cm-scale samples.

Resilience of bacterial quorum sensing against fluid flow

NASA Astrophysics Data System (ADS)

Emge, Philippe; Moeller, Jens; Jang, Hongchul; Rusconi, Roberto; Yawata, Yutaka; Stocker, Roman; Vogel, Viola

2016-09-01

Quorum sensing (QS) is a population-density dependent chemical process that enables bacteria to communicate based on the production, secretion and sensing of small inducer molecules. While recombinant constructs have been widely used to decipher the molecular details of QS, how those findings translate to natural QS systems has remained an open question. Here, we compare the activation of natural and synthetic Pseudomonas aeruginosa LasI/R QS systems in bacteria exposed to quiescent conditions and controlled flows. Quantification of QS-dependent GFP expression in suspended cultures and in surface-attached microcolonies revealed that QS onset in both systems was similar under quiescent conditions but markedly differed under flow. Moderate flow (Pe > 25) was sufficient to suppress LasI/R QS recombinantly expressed in Escherichia coli, whereas only high flow (Pe > 102) suppressed QS in wild-type P. aeruginosa. We suggest that this difference stems from the differential production of extracellular matrix and that the matrix confers resilience against moderate flow to QS in wild-type organisms. These results suggest that the expression of a biofilm matrix extends the environmental conditions under which QS-based cell-cell communication is effective and that findings from synthetic QS circuits cannot be directly translated to natural systems.

Effect of slip on existence, uniqueness, and behavior of similarity solutions for steady incompressible laminar flow in porous tubes and channels

NASA Astrophysics Data System (ADS)

Chellam, Shankararaman; Liu, Mei

2006-08-01

The existence and multiplicity of similarity solutions for steady, fully developed, incompressible laminar flow in uniformly porous tubes and channels with one or two permeable walls is investigated from first principles. A fourth-order ordinary differential equation obtained by simplifying the Navier-Stokes equations by introducing Berman's stream function [A. S. Berman, J. Appl. Phys. 24, 1232 (1953)] and Terrill's transformation [R. M. Terrill, Aeronaut. Q. 15, 299 (1964)] is probed analytically. In this work that considers only symmetric flows for symmetric ducts; the no-slip boundary condition at porous walls is relaxed to account for momentum transfer within the porous walls. By employing the Saffman [P. G. Saffman, Stud. Appl. Math. 50, 93 (1971)] form of the slip boundary condition, the uniqueness of similarity solutions is investigated theoretically in terms of the signs of the guesses for the missing initial conditions. Solutions were obtained for all wall Reynolds numbers for channel flows whereas no solutions existed for intermediate values for tube flows. Introducing slip did not fundamentally change the number or the character of solutions corresponding to different sections. However, the range of wall Reynolds numbers for which similarity solutions are theoretically impossible in tube flows was found to be a weak function of the slip coefficient. Slip also weakly influenced the transition wall Reynolds number corresponding to flow in the direction of a favorable axial pressure gradient to one in the direction of an adverse pressure gradient. Momentum transfer from the longitudinal axis to the walls appears to occur more efficiently in porous channels compared to porous tubes even in the presence of slip.

Use of direct gradient analysis to uncover biological hypotheses in 16s survey data and beyond.

PubMed

Erb-Downward, John R; Sadighi Akha, Amir A; Wang, Juan; Shen, Ning; He, Bei; Martinez, Fernando J; Gyetko, Margaret R; Curtis, Jeffrey L; Huffnagle, Gary B

2012-01-01

This study investigated the use of direct gradient analysis of bacterial 16S pyrosequencing surveys to identify relevant bacterial community signals in the midst of a "noisy" background, and to facilitate hypothesis-testing both within and beyond the realm of ecological surveys. The results, utilizing 3 different real world data sets, demonstrate the utility of adding direct gradient analysis to any analysis that draws conclusions from indirect methods such as Principal Component Analysis (PCA) and Principal Coordinates Analysis (PCoA). Direct gradient analysis produces testable models, and can identify significant patterns in the midst of noisy data. Additionally, we demonstrate that direct gradient analysis can be used with other kinds of multivariate data sets, such as flow cytometric data, to identify differentially expressed populations. The results of this study demonstrate the utility of direct gradient analysis in microbial ecology and in other areas of research where large multivariate data sets are involved.

Numerical modeling of multidimensional flow in seals and bearings used in rotating machinery

NASA Technical Reports Server (NTRS)

Hendricks, R. C.; Tam, L. T.; Przekwas, A.; Muszynska, A.; Braun, M. J.; Mullen, R. L.

1988-01-01

The rotordynamic behavior of turbomachinery is critically dependent on fluid dynamic rotor forces developed by various types of seals and bearings. The occurrence of self-excited vibrations often depends on the rotor speed and load. Misalignment and rotor wobbling motion associated with differential clearance were often attributed to stability problems. In general, the rotative character of the flowfield is a complex three dimensional system with secondary flow patterns that significantly alter the average fluid circumferential velocity. A multidimensional, nonorthogonal, body-fitted-grid fluid flow model is presented that describes the fluid dynamic forces and the secondary flow pattern development in seals and bearings. Several numerical experiments were carried out to demonstrate the characteristics of this complex flowfield. Analyses were performed by solving a conservation form of the three dimensional Navier-Stokes equations transformed to those for a rotating observer and using the general-purpose computer code PHOENICS with the assumptions that the rotor orbit is circular and that static eccentricity is zero. These assumptions have enabled a precise steady-state analysis to be used. Fluid injection from ports near the seal or bearing center increased fluid-film direct dynamic stiffness and, in some cases, significantly increased quadrature dynamic stiffness. Injection angle and velocity could be used for active rotordynamic control; for example, injection, when compared with no injection, increased direct dynamic stiffness, which is an important factor for hydrostatic bearings.

An Initial Investigation of the Effects of Turbulence Models on the Convergence of the RK/Implicit Scheme

NASA Technical Reports Server (NTRS)

Swanson, R. C.; Rossow, C.-C.

2008-01-01

A three-stage Runge-Kutta (RK) scheme with multigrid and an implicit preconditioner has been shown to be an effective solver for the fluid dynamic equations. This scheme has been applied to both the compressible and essentially incompressible Reynolds-averaged Navier-Stokes (RANS) equations using the algebraic turbulence model of Baldwin and Lomax (BL). In this paper we focus on the convergence of the RK/implicit scheme when the effects of turbulence are represented by either the Spalart-Allmaras model or the Wilcox k-! model, which are frequently used models in practical fluid dynamic applications. Convergence behavior of the scheme with these turbulence models and the BL model are directly compared. For this initial investigation we solve the flow equations and the partial differential equations of the turbulence models indirectly coupled. With this approach we examine the convergence behavior of each system. Both point and line symmetric Gauss-Seidel are considered for approximating the inverse of the implicit operator of the flow solver. To solve the turbulence equations we use a diagonally dominant alternating direction implicit (DDADI) scheme. Computational results are presented for three airfoil flow cases and comparisons are made with experimental data. We demonstrate that the two-dimensional RANS equations and transport-type equations for turbulence modeling can be efficiently solved with an indirectly coupled algorithm that uses the RK/implicit scheme for the flow equations.

The initial-value problem for viscous channel flows

NASA Technical Reports Server (NTRS)

Criminale, W. O.; Jackson, T. L.; Lasseigne, D. G.

1995-01-01

Plane viscous channel flows are perturbed and the ensuing initial-value problems are investigated in detail. Unlike traditional methods where traveling wave normal modes are assumed for solution, this works offers a means whereby completely arbitrary initial input can be specified without having to resort to eigenfunction expansions. The full temporal behavior, including both early time transients and the long time asymptotics, can be determined for any initial disturbance. Effects of three-dimensionality can be assessed. The bases for the analysis are: (a) linearization of the governing equations; (b) Fourier decomposition in the spanwise and streamwise directions of the flow; and (c) direct numerical integration of the resulting partial differential equations. All of the stability data that are known for such flows can be reproduced. Also, the optimal initial condition can be determined in a straight forward manner and such optimal conditions clearly reflect transient growth data that is easily determined by a rational choice of a basis for the initial conditions. Although there can be significant transient growth for subcritical values of the Reynolds number using this approach it does not appear possible that arbitrary initial conditions will lead to the exceptionally large transient amplitudes that have been determined by optimization of normal modes. The approach is general and can be applied to other classes of problems where only a finite discrete spectrum exists, such as the boundary layer for example.

Derivation of Skeletal Myogenic Precursors from Human Pluripotent Stem Cells Using Conditional Expression of PAX7.

PubMed

Darabi, Radbod; Perlingeiro, Rita C R

2016-01-01

Cell-based therapies are considered as one of the most promising approaches for the treatment of degenerating pathologies including muscle disorders and dystrophies. Advances in the approach of reprogramming somatic cells into induced pluripotent stem (iPS) cells allow for the possibility of using the patient's own pluripotent cells to generate specific tissues for autologous transplantation. In addition, patient-specific tissue derivatives have been shown to represent valuable material for disease modeling and drug discovery. Nevertheless, directed differentiation of pluripotent stem cells into a specific lineage is not a trivial task especially in the case of skeletal myogenesis, which is generally poorly recapitulated during the in vitro differentiation of pluripotent stem cells.Here, we describe a practical and efficient method for the derivation of skeletal myogenic precursors from differentiating human pluripotent stem cells using controlled expression of PAX7. Flow cytometry (FACS) purified myogenic precursors can be expanded exponentially and differentiated in vitro into myotubes, enabling researchers to use these cells for disease modeling as well as therapeutic purposes.

Nonmodal phenomena in differentially rotating dusty plasmas

NASA Astrophysics Data System (ADS)

Poedts, Stefaan; Rogava, Andria D.

2000-10-01

In this paper the foundation is layed for the nonmodal investigation of velocity shear induced phenomena in a differentially rotating flow of a dusty plasma. The simplest case of nonmagnetized flow is considered. It is shown that, together with the innate properties of the dusty plasma, the presence of differential rotation, Coriolis forces, and self-gravity casts a considerable richness on the nonmodal dynamics of linear perturbations in the flow. In particular: (i) dust-acoustic waves acquire the ability to extract energy from the mean flow and (ii) shear-induced, nonperiodic modes of collective plasma behavior-shear-dust-acoustic vortices-are generated. The presence of self-gravity and the nonzero Coriolis parameter (``epicyclic shaking'') makes these collective modes transiently unstable. .

EDDA 1.0: integrated simulation of debris flow erosion, deposition and property changes

NASA Astrophysics Data System (ADS)

Chen, H. X.; Zhang, L. M.

2015-03-01

Debris flow material properties change during the initiation, transportation and deposition processes, which influences the runout characteristics of the debris flow. A quasi-three-dimensional depth-integrated numerical model, EDDA (Erosion-Deposition Debris flow Analysis), is presented in this paper to simulate debris flow erosion, deposition and induced material property changes. The model considers changes in debris flow density, yield stress and dynamic viscosity during the flow process. The yield stress of the debris flow mixture determined at limit equilibrium using the Mohr-Coulomb equation is applicable to clear water flow, hyper-concentrated flow and fully developed debris flow. To assure numerical stability and computational efficiency at the same time, an adaptive time stepping algorithm is developed to solve the governing differential equations. Four numerical tests are conducted to validate the model. The first two tests involve a one-dimensional debris flow with constant properties and a two-dimensional dam-break water flow. The last two tests involve erosion and deposition, and the movement of multi-directional debris flows. The changes in debris flow mass and properties due to either erosion or deposition are shown to affect the runout characteristics significantly. The model is also applied to simulate a large-scale debris flow in Xiaojiagou Ravine to test the performance of the model in catchment-scale simulations. The results suggest that the model estimates well the volume, inundated area, and runout distance of the debris flow. The model is intended for use as a module in a real-time debris flow warning system.

Diversity and genetic structure of the Mexican endemic epiphyte Tillandsia achyrostachys E. Morr. ex Baker var. achyrostachys (Bromeliaceae).

PubMed

González-Astorga, Jorge; Cruz-Angón, Andrea; Flores-Palacios, Alejandro; Vovides, Andrew P

2004-10-01

The monoecious, bird-pollinated epiphytic Tillandsia achyrostachys E. Morr. ex Baker var. achyrostachys is an endemic bromeliad of the tropical dry forests of Mexico with clonal growth. In the Sierra de Huautla Natural Reserve this species shows a host preference for Bursera copallifera (Sessé & Moc ex. DC) Bullock. As a result of deforestation in the study area, B. copallifera has become a rare tree species in the remaining forest patches. This human-induced disturbance has directly affected the population densities of T. achyrostachys. In this study the genetic consequences of habitat fragmentation were assessed by comparing the genetic diversity, gene flow and genetic differentiation in six populations of T. achyrostachys in the Sierra de Huautla Natural Reserve, Mexico. Allozyme electrophoresis of sixteen loci (eleven polymorphic and five monomorphic) were used. The data were analysed with standard statistical approximations for obtaining diversity, genetic structure and gene flow. Genetic diversity and allelic richness were: HE = 0.21 +/- 0.02, A = 1.86 +/- 0.08, respectively. F-statistics revealed a deficiency of heterozygous plants in all populations (Fit = 0.65 +/- 0.02 and Fis = 0.43 +/- 0.06). Significant genetic differentiation between populations was detected (Fst = 0.39 +/- 0.07). Average gene flow between pairs of populations was relatively low and had high variation (Nm = 0.46 +/- 0.21), which denotes a pattern of isolation by distance. The genetic structure of populations of T. achyrostachys suggests that habitat fragmentation has reduced allelic richness and genetic diversity, and increased significant genetic differentiation (by approx. 40 %) between populations. The F-statistic values (>0) and the level of gene flow found suggest that habitat fragmentation has broken up the former population structure. In this context, it is proposed that the host trees of T. achyrostachys should be considered as a conservation priority, since they represent the limiting factor to bromeliad population growth and connectivity.

Multiciliated Cells in Animals.

PubMed

Meunier, Alice; Azimzadeh, Juliette

2016-12-01

Many animal cells assemble single cilia involved in motile and/or sensory functions. In contrast, multiciliated cells (MCCs) assemble up to 300 motile cilia that beat in a coordinate fashion to generate a directional fluid flow. In the human airways, the brain, and the oviduct, MCCs allow mucus clearance, cerebrospinal fluid circulation, and egg transportation, respectively. Impairment of MCC function leads to chronic respiratory infections and increased risks of hydrocephalus and female infertility. MCC differentiation during development or repair involves the activation of a regulatory cascade triggered by the inhibition of Notch activity in MCC progenitors. The downstream events include the simultaneous assembly of a large number of basal bodies (BBs)-from which cilia are nucleated-in the cytoplasm of the differentiating MCCs, their migration and docking at the plasma membrane associated to an important remodeling of the actin cytoskeleton, and the assembly and polarization of motile cilia. The direction of ciliary beating is coordinated both within cells and at the tissue level by a combination of planar polarity cues affecting BB position and hydrodynamic forces that are both generated and sensed by the cilia. Herein, we review the mechanisms controlling the specification and differentiation of MCCs and BB assembly and organization at the apical surface, as well as ciliary assembly and coordination in MCCs. Copyright © 2016 Cold Spring Harbor Laboratory Press; all rights reserved.

Flow cytometric analysis of cell-surface and intracellular antigens in leukemia diagnosis.

PubMed

Knapp, W; Strobl, H; Majdic, O

1994-12-15

New technology allows highly sensitive flow cytometric detection and quantitative analysis of intracellular antigens in normal and malignant hemopoietic cells. With this technology, the earliest stages of myeloid and lymphoid differentiation can easily and reliably be identified using antibodies directed against (pro-)myeloperoxidase/MPO, CD22 and CD3 antigens, respectively. Particularly for the analysis of undifferentiated acute myeloblastic leukemia (AML) cells, the immunological demonstration of intracellular MPO or its enzymatically inactive proforms is highly relevant, since other myeloid marker molecules such as CD33, CD13, or CDw65 are either not restricted to the granulomonocytic lineage or appear later in differentiation. By combining MPO staining with staining for lactoferrin (LF), undifferentiated cells can be distinguished from the granulomonocytic maturation compartment in bone marrow, since LF is selectively expressed from the myelocyte stage of differentiation onward. The list of informative intracellular antigens to be used in leukemia cell analysis will certainly expand in the near future. One candidate, intracellular CD68, has already been tested by us, and results are presented. Also dealt within this article are surface marker molecules not (as yet) widely used in leukemia cell analysis but with the potential to provide important additional information. Among them are the surface structures CD15, CD15s, CDw65, CD79a (MB-1), CD79b (B29), CD87 (uPA-R), and CD117 (c-kit).

Modified Beer-Lambert law for blood flow

NASA Astrophysics Data System (ADS)

Baker, Wesley B.; Parthasarathy, Ashwin B.; Busch, David R.; Mesquita, Rickson C.; Greenberg, Joel H.; Yodh, A. G.

2015-03-01

The modified Beer-Lambert law is among the most widely used approaches for analysis of near-infrared spectroscopy (NIRS) reflectance signals for measurements of tissue blood volume and oxygenation. Briefly, the modified Beer-Lambert paradigm is a scheme to derive changes in tissue optical properties based on continuous-wave (CW) diffuse optical intensity measurements. In its simplest form, the scheme relates differential changes in light transmission (in any geometry) to differential changes in tissue absorption. Here we extend this paradigm to the measurement of tissue blood flow by diffuse correlation spectroscopy (DCS). In the new approach, differential changes of the intensity temporal auto-correlation function at a single delay-time are related to differential changes in blood flow. The key theoretical results for measurement of blood flow changes in any tissue geometry are derived, and we demonstrate the new method to monitor cerebral blood flow in a pig under conditions wherein the semi-infinite geometry approximation is fairly good. Specifically, the drug dinitrophenol was injected in the pig to induce a gradual 200% increase in cerebral blood flow, as measured with MRI velocity flow mapping and by DCS. The modified Beer-Lambert law for flow accurately recovered these flow changes using only a single delay-time in the intensity auto-correlation function curve. The scheme offers increased DCS measurement speed of blood flow. Further, the same techniques using the modified Beer-Lambert law to filter out superficial tissue effects in NIRS measurements of deep tissues can be applied to the DCS modified Beer-Lambert law for blood flow monitoring of deep tissues.

Numerical Method for Darcy Flow Derived Using Discrete Exterior Calculus

NASA Astrophysics Data System (ADS)

Hirani, A. N.; Nakshatrala, K. B.; Chaudhry, J. H.

2015-05-01

We derive a numerical method for Darcy flow, and also for Poisson's equation in mixed (first order) form, based on discrete exterior calculus (DEC). Exterior calculus is a generalization of vector calculus to smooth manifolds and DEC is one of its discretizations on simplicial complexes such as triangle and tetrahedral meshes. DEC is a coordinate invariant discretization, in that it does not depend on the embedding of the simplices or the whole mesh. We start by rewriting the governing equations of Darcy flow using the language of exterior calculus. This yields a formulation in terms of flux differential form and pressure. The numerical method is then derived by using the framework provided by DEC for discretizing differential forms and operators that act on forms. We also develop a discretization for a spatially dependent Hodge star that varies with the permeability of the medium. This also allows us to address discontinuous permeability. The matrix representation for our discrete non-homogeneous Hodge star is diagonal, with positive diagonal entries. The resulting linear system of equations for flux and pressure are saddle type, with a diagonal matrix as the top left block. The performance of the proposed numerical method is illustrated on many standard test problems. These include patch tests in two and three dimensions, comparison with analytically known solutions in two dimensions, layered medium with alternating permeability values, and a test with a change in permeability along the flow direction. We also show numerical evidence of convergence of the flux and the pressure. A convergence experiment is included for Darcy flow on a surface. A short introduction to the relevant parts of smooth and discrete exterior calculus is included in this article. We also include a discussion of the boundary condition in terms of exterior calculus.

Isolation and Characterization of Human Mesenchymal Stem Cells From Facet Joints and Interspinous Ligaments.

PubMed

Kristjánsson, Baldur; Limthongkul, Worawat; Yingsakmongkol, Wicharn; Thantiworasit, Pattarawat; Jirathanathornnukul, Napaphat; Honsawek, Sittisak

2016-01-01

A descriptive in vitro study on isolation and differentiation of human mesenchymal stem cells (MSCs) derived from the facet joints and interspinous ligaments. To isolate cells from the facet joints and interspinous ligaments and investigate their surface marker profile and differentiation potentials. Lumbar spinal canal stenosis and ossification of the posterior longitudinal ligament are progressive conditions characterized by the hypertrophy and ossification of ligaments and joints within the spinal canal. MSCs are believed to play a role in the advancement of these diseases and the existence of MSCs has been demonstrated within the ligamentum flavum and posterior longitudinal ligament. The aim of this study was to investigate whether these cells could also be found within facet joints and interspinous ligaments. Samples were harvested from 10 patients undergoing spinal surgery. The MSCs from facet joints and interspinous ligaments were isolated using direct tissue explant technique. Cell surface antigen profilings were performed via flow cytometry. Their lineage differentiation potentials were analyzed. The facet joints and interspinous ligaments-derived MSCs have the tri-lineage potential to be differentiated into osteogenic, adipogenic, and chondrogenic cells under appropriate inductions. Flow cytometry analysis revealed both cell lines expressed MSCs markers. Both facet joints and interspinous ligaments-derived MSCs expressed marker genes for osteoblasts, adipocytes, and chondrocytes. The facet joints and interspinous ligaments may provide alternative sources of MSCs for tissue engineering applications. The facet joints and interspinous ligaments-derived MSCs are part of the microenvironment of the human ligaments of the spinal column and might play a crucial role in the development and progression of degenerative spine conditions.

Network analysis of patient flow in two UK acute care hospitals identifies key sub-networks for A&E performance

PubMed Central

Stringer, Clive; Beeknoo, Neeraj

2017-01-01

The topology of the patient flow network in a hospital is complex, comprising hundreds of overlapping patient journeys, and is a determinant of operational efficiency. To understand the network architecture of patient flow, we performed a data-driven network analysis of patient flow through two acute hospital sites of King’s College Hospital NHS Foundation Trust. Administration databases were queried for all intra-hospital patient transfers in an 18-month period and modelled as a dynamic weighted directed graph. A ‘core’ subnetwork containing only 13–17% of all edges channelled 83–90% of the patient flow, while an ‘ephemeral’ network constituted the remainder. Unsupervised cluster analysis and differential network analysis identified sub-networks where traffic is most associated with A&E performance. Increased flow to clinical decision units was associated with the best A&E performance in both sites. The component analysis also detected a weekend effect on patient transfers which was not associated with performance. We have performed the first data-driven hypothesis-free analysis of patient flow which can enhance understanding of whole healthcare systems. Such analysis can drive transformation in healthcare as it has in industries such as manufacturing. PMID:28968472

Wavelets solution of MHD 3-D fluid flow in the presence of slip and thermal radiation effects

NASA Astrophysics Data System (ADS)

Usman, M.; Zubair, T.; Hamid, M.; Haq, Rizwan Ul; Wang, Wei

2018-02-01

This article is devoted to analyze the magnetic field, slip, and thermal radiations effects on generalized three-dimensional flow, heat, and mass transfer in a channel of lower stretching wall. We supposed two various lateral direction rates for the lower stretching surface of the wall while the upper wall of the channel is subjected to constant injection. Moreover, influence of thermal slip on the temperature profile beside the viscous dissipation and Joule heating is also taken into account. The governing set of partial differential equations of the heat transfer and flow are transformed to nonlinear set of ordinary differential equations (ODEs) by using the compatible similarity transformations. The obtained nonlinear ODE set tackled by means of a new wavelet algorithm. The outcomes obtained via modified Chebyshev wavelet method are compared with Runge-Kutta (order-4). The worthy comparison, error, and convergence analysis shows an excellent agreement. Additionally, the graphical representation for various physical parameters including the skin friction coefficient, velocity, the temperature gradient, and the temperature profiles are plotted and discussed. It is observed that for a fixed value of velocity slip parameter a suitable selection of stretching ratio parameter can be helpful in hastening the heat transfer rate and in reducing the viscous drag over the stretching sheet. Finally, the convergence analysis is performed which endorsing that this proposed method is well efficient.

Unsteady flow over a decelerating rotating sphere

NASA Astrophysics Data System (ADS)

Turkyilmazoglu, M.

2018-03-01

Unsteady flow analysis induced by a decelerating rotating sphere is the main concern of this paper. A revolving sphere in a still fluid is supposed to slow down at an angular velocity rate that is inversely proportional to time. The governing partial differential equations of motion are scaled in accordance with the literature, reducing to the well-documented von Kármán equations in the special circumstance near the pole. Both numerical and perturbation approaches are pursued to identify the velocity fields, shear stresses, and suction velocity far above the sphere. It is detected that an induced flow surrounding the sphere acts accordingly to adapt to the motion of the sphere up to some critical unsteadiness parameters at certain latitudes. Afterward, the decay rate of rotation ceases such that the flow at the remaining azimuths starts revolving freely. At a critical unsteadiness parameter corresponding to s = -0.681, the decelerating sphere rotates freely and requires no more torque. At a value of s exactly matching the rotating disk flow at the pole identified in the literature, the entire flow field around the sphere starts revolving faster than the disk itself. Increasing values of -s almost diminish the radial outflow. This results in jet flows in both the latitudinal and meridional directions, concentrated near the wall region. The presented mean flow results will be useful for analyzing the instability features of the flow, whether of a convective or absolute nature.

Erythro-myeloid progenitors can differentiate from endothelial cells and modulate embryonic vascular remodeling

PubMed Central

Kasaai, Bahar; Caolo, Vincenza; Peacock, Hanna M.; Lehoux, Stephanie; Gomez-Perdiguero, Elisa; Luttun, Aernout; Jones, Elizabeth A. V.

2017-01-01

Erythro-myeloid progenitors (EMPs) were recently described to arise from the yolk sac endothelium, just prior to vascular remodeling, and are the source of adult/post-natal tissue resident macrophages. Questions remain, however, concerning whether EMPs differentiate directly from the endothelium or merely pass through. We provide the first evidence in vivo that EMPs can emerge directly from endothelial cells (ECs) and demonstrate a role for these cells in vascular development. We find that EMPs express most EC markers but late EMPs and EMP-derived cells do not take up acetylated low-density lipoprotein (AcLDL), as ECs do. When the endothelium is labelled with AcLDL before EMPs differentiate, EMPs and EMP-derived cells arise that are AcLDL+. If AcLDL is injected after the onset of EMP differentiation, however, the majority of EMP-derived cells are not double labelled. We find that cell division precedes entry of EMPs into circulation, and that blood flow facilitates the transition of EMPs from the endothelium into circulation in a nitric oxide-dependent manner. In gain-of-function studies, we inject the CSF1-Fc ligand in embryos and found that this increases the number of CSF1R+ cells, which localize to the venous plexus and significantly disrupt venous remodeling. This is the first study to definitively establish that EMPs arise from the endothelium in vivo and show a role for early myeloid cells in vascular development. PMID:28272478

Dynamic Network-Based Relevance Score Reveals Essential Proteins and Functional Modules in Directed Differentiation

PubMed Central

Wu, Chia-Chou; Lin, Che

2015-01-01

The induction of stem cells toward a desired differentiation direction is required for the advancement of stem cell-based therapies. Despite successful demonstrations of the control of differentiation direction, the effective use of stem cell-based therapies suffers from a lack of systematic knowledge regarding the mechanisms underlying directed differentiation. Using dynamic modeling and the temporal microarray data of three differentiation stages, three dynamic protein-protein interaction networks were constructed. The interaction difference networks derived from the constructed networks systematically delineated the evolution of interaction variations and the underlying mechanisms. A proposed relevance score identified the essential components in the directed differentiation. Inspection of well-known proteins and functional modules in the directed differentiation showed the plausibility of the proposed relevance score, with the higher scores of several proteins and function modules indicating their essential roles in the directed differentiation. During the differentiation process, the proteins and functional modules with higher relevance scores also became more specific to the neuronal identity. Ultimately, the essential components revealed by the relevance scores may play a role in controlling the direction of differentiation. In addition, these components may serve as a starting point for understanding the systematic mechanisms of directed differentiation and for increasing the efficiency of stem cell-based therapies. PMID:25977693

Elliptic flow of charged pions, protons and strange particles emitted in Pb + Au collisions at top SPS energy

NASA Astrophysics Data System (ADS)

Adamová, D.; Agakichiev, G.; Andronic, A.; Antończyk, D.; Appelshäuser, H.; Belaga, V.; Bielčíková, J.; Braun-Munzinger, P.; Busch, O.; Cherlin, A.; Damjanović, S.; Dietel, T.; Dietrich, L.; Drees, A.; Dubitzky, W.; Esumi, S. I.; Filimonov, K.; Fomenko, K.; Fraenkel, Z.; Garabatos, C.; Glässel, P.; Hering, G.; Holeczek, J.; Kalisky, M.; Krobath, G.; Kushpil, V.; Maas, A.; Marín, A.; Milošević, J.; Miśkowiec, D.; Panebrattsev, Y.; Petchenova, O.; Petráček, V.; Radomski, S.; Rak, J.; Ravinovich, I.; Rehak, P.; Sako, H.; Schmitz, W.; Schuchmann, S.; Sedykh, S.; Shimansky, S.; Stachel, J.; Šumbera, M.; Tilsner, H.; Tserruya, I.; Tsiledakis, G.; Wessels, J. P.; Wienold, T.; Wurm, J. P.; Yurevich, S.; Yurevich, V.; Ceres Collaboration

Differential elliptic flow spectra v2(pT) of π-, KS0, p, Λ have been measured at √{sNN}=17.3 GeV around midrapidity by the CERN-CERES/NA45 experiment in mid-central Pb + Au collisions (10% of σgeo). The pT range extends from about 0.1 GeV/c (0.55 GeV/c for Λ) to more than 2 GeV/c. Protons below 0.4 GeV/c are directly identified by dE/dx. At higher pT, proton elliptic flow is derived as a constituent, besides π+ and K+, of the elliptic flow of positive pion candidates. This retrieval requires additional inputs: (i) of the particle composition, and (ii) of v2(pT) of positive pions. For (i), particle ratios obtained by NA49 are adapted to CERES conditions; for (ii), the measured v2(pT) of negative pions is substituted, assuming π+ and π- elliptic flow magnitudes to be sufficiently close. The v2(pT) spectra are compared to ideal-hydrodynamics calculations. In synopsis of the series π--KS0-p-Λ, flow magnitudes are seen to fall with decreasing pT progressively even below hydro calculations with early kinetic freeze-out (Tf=160 MeV) leaving not much time for hadronic evolution. The proton v2(pT) data show a downward swing towards low pT with excursions into negative v2 values. The pion-flow isospin asymmetry observed recently by STAR at RHIC, invalidating in principle our working assumption, is found in its impact on proton flow bracketed from above by the direct proton flow data, and not to alter any of our conclusions. Results are discussed in perspective of recent viscous hydrodynamics studies which focus on late hadronic stages.

Bioreactor strategy in bone tissue engineering: pre-culture and osteogenic differentiation under two flow configurations.

PubMed

Kim, Junho; Ma, Teng

2012-11-01

Since robust osteogenic differentiation and mineralization are integral to the engineering of bone constructs, understanding the impact of the cellular microenvironments on human mesenchymal stem cell (hMSCs) osteogenic differentiation is crucial to optimize bioreactor strategy. Two perfusion flow conditions were utilized in order to understand the impact of the flow configuration on hMSC construct development during both pre-culture (PC) in growth media and its subsequent osteogenic induction (OI). The media in the in-house perfusion bioreactor was controlled to perfuse either around (termed parallel flow [PF]) the construct surfaces or penetrate through the construct (termed transverse flow [TF]) for 7 days of the PC followed by 7 days of the OI. The flow configuration during the PC not only changed growth kinetics but also influenced cell distribution and potency of osteogenic differentiation and mineralization during the subsequent OI. While shear stress resulted from the TF stimulated cell proliferation during PC, the convective removal of de novo extracellular matrix (ECM) proteins and growth factors (GFs) reduced cell proliferation on OI. In contrast, the effective retention of de novo ECM proteins and GFs in the PC constructs under the PF maintained cell proliferation under the OI but resulted in localized cell aggregations, which influenced their osteogenic differentiation. The results revealed the contrasting roles of the convective flow as a mechanical stimulus, the redistribution of the cells and macromolecules in 3D constructs, and their divergent impacts on cellular events, leading to bone construct formation. The results suggest that the modulation of the flow configuration in the perfusion bioreactor is an effective strategy that regulates the construct properties and maximizes the functional outcome.

Real Time Ferrograph Development.

DTIC Science & Technology

1979-11-01

differential temperature of 65 0 C. Since opteo- electronic devices (photodiodes, photoresistors, etc.) have a maximum operating temperature around 85 0 C, it is...flow during the precipitation cycle. This regulator must keep the flow rate constant at any given temperature regardless of the differential pressure...across the sensing head. The pressure regulator achieved this by using the differential pressure across a fixed re;7trictor to move a bellows diaphragm

Effect of permeable flow on cyclic layering in solidifying magma bodies: Insights from an analog experiment of diffusion-precipitation systems

NASA Astrophysics Data System (ADS)

Toramaru, A.; Yamauchi, S.

2012-04-01

Characteristic structures such as rhythmic layering, cress cumulate, cross bedding, perpendicular feldspar rock etc, are commonly observed in layered intrusion or shallow magmatic intrusions. These structures result from complex processes including thermal and compositional diffusions, crystallization, crystal settling, convection and interaction among three phases (crystals, bubble, melt). In order to understand how the differentiation proceeds in solidifying magma bodies from each characteristic structure together with chemical signatures, it is necessary to evaluate the relative importance among these elemental processes on structures. As an attempt to evaluate the effect of advection on a diffusion-related structure, we carried out an analog experiment of Liesegang system using lead-iodide (PbI2) crystallization in agar media which have been normally used to prohibit convection. In the ordinary Liesegang band formation experiments including only diffusion and crystallization kinetics without any advection and convection, the precipitation bands develop with regular spacing following a geometric progression due to two-component diffusion and reaction with supersaturation. This type of banding structure has been advocated as the same type of cyclic layering or vesicle layering (a sort of rhythmic layering) in dykes or sills. In order to see the effect of one-directional advection on Liesegang band, we apply the electric field (5 V to 25 V for a distance 15 cm) along the concentration gradient in agar media, thereby counteracting flows of lead anion Pb2+ and iodide ion I- are driven at constant velocities. The flows of anions and ions are equivalent to the permeable flows in porous media of crystal mush. The resultant precipitation structures exhibit very curious banding structure in which band spacings do not change with distance, are nearly constant and quite narrow, depending on the voltage, unlike those in ordinary Liesegang bands in which band spacings increase with distance following geometric progression. Further interestingly each band consists of a lot of very tiny irregular-shaped crystal aggregates. From experimental results and scaling arguments, with regard to the effect of one directional permeable flow on band spacing of cyclic layering, we propose a hypothesis of constant Peclet number that Peclet number (ratio of flow velocity to diffusive velocity) is nearly unity. By applying the hypothesis to natural examples, we can estimate a value of permeable flow velocity of interstitial melts in differentiating magma bodies from values of a band spacing and diffusivity data.

[Differentiation of mesenchymal stem cells into cardiomyocytes induced by cardiomyocytes].

PubMed

Wang, Ting-Zhong; Ma, Ai-Qun; Xu, Zheng-Yun; Jiang, Wen-Hui; Du, Yuan

2005-06-01

To investigate the role of adult cardiomyocytes in the differentiation of mesenchymal stem cells (MSCs) into cardiomyocytes. Rat MSCs were isolated by a Percoll's gradient solution and cultured in low-glucose Dulbecco' s modified Eagle' s medium (DMEM). After 2 passages, cell-surface antigen CD34, CD71 and CD90 for rat MSCs were determined by flow cytometry, and these MSCs were transfected with pEGFP-N3 by Lipofectamine2000. Then those MSCs labeled with GFP, were cultured in contacted, nocontacted and conditioned with adult rat myocardiocytes. Immunofluorescence staining against alpha-actin, desmin, and troponin-T were performed after 1 week. Immunofluorescence staining was positive against alpha-actin, desmin, and troponin-T on MSCs in contacted culture group. In contrast, no alpha-actin, desmin, and troponin-T expression on MSCs were observed in the noncontacted culture group and the conditioned culture group. Direct cell-to-cell contact between MSCs and adult cardiomyocytes may induce differentiation of MSCs into cardiomyocytes.

ELECTRICAL PROTECTIVE DEVICE

DOEpatents

Baker, W.R.

1958-05-01

A protective system for high-energy resonant cavities is described. It is particularly directed to the discharging of resonant cavities for preventing energy back flow through associated equipment as a result of faults. The invention in general provides means defining a spark gap communicating with the interior of a cavity or waveguide adapted for high-power energization or an evacuated chamber containing an electrode having a large power differential from the wall or other electrode. A control or trigger circuit is connected between a power supply energizing the cavity and the spark gap whereby reverse current flow in the power supply circuit instantaneously triggers the spark gap to initiate discharge within the cavity, whereupon cavity energy discharges across the gap, or with an electrode present the electrode discharges to one of the spark gap elements.

On a solution of the nonlinear differential equation for transonic flow past a wave-shaped wall

NASA Technical Reports Server (NTRS)

Kaplan, Carl

1952-01-01

The Prandtl-Busemann small-perturbation method is utilized to obtain the flow of a compressible fluid past an infinitely long wave-shaped wall. When the essential assumption for transonic flow (that all Mach numbers in the region of flow are nearly unity) is introduced, the expression for the velocity potential takes the form of a power series in the transonic similarity parameter. On the basis of this form of the solution, an attempt is made to solve the nonlinear differential equation for transonic flow past the wavy wall. The analysis utilized exhibits clearly the difficulties inherent in nonlinear-flow problems.

Direct differentiation of the quasi-incompressible fluid formulation of fluid-structure interaction using the PFEM

NASA Astrophysics Data System (ADS)

Zhu, Minjie; Scott, Michael H.

2017-07-01

Accurate and efficient response sensitivities for fluid-structure interaction (FSI) simulations are important for assessing the uncertain response of coastal and off-shore structures to hydrodynamic loading. To compute gradients efficiently via the direct differentiation method (DDM) for the fully incompressible fluid formulation, approximations of the sensitivity equations are necessary, leading to inaccuracies of the computed gradients when the geometry of the fluid mesh changes rapidly between successive time steps or the fluid viscosity is nonzero. To maintain accuracy of the sensitivity computations, a quasi-incompressible fluid is assumed for the response analysis of FSI using the particle finite element method and DDM is applied to this formulation, resulting in linearized equations for the response sensitivity that are consistent with those used to compute the response. Both the response and the response sensitivity can be solved using the same unified fractional step method. FSI simulations show that although the response using the quasi-incompressible and incompressible fluid formulations is similar, only the quasi-incompressible approach gives accurate response sensitivity for viscous, turbulent flows regardless of time step size.

Assessment of Mitigation Systems on Vapor Intrusion ...

EPA Pesticide Factsheets

Vapor intrusion is the migration of subsurface vapors, including radon and volatile organic compounds (VOCs), in soil gas from the subsurface to indoor air. Vapor intrusion happens because there are pressure and concentration differentials between indoor air and soil gas. Indoor environments are often negatively pressurized with respect to outdoor air and soil gas (for example, from exhaust fans or the stack effect), and this pressure difference allows soil gas containing subsurface vapors to flow into indoor air through advection. In addition, concentration differentials cause VOCs and radon to migrate from areas of higher to lower concentrations through diffusion, which is another cause of vapor intrusion. Current practice for evaluating the vapor intrusion pathway involves a multiple line of evidence approach based on direct measurements in groundwater, external soil gas, subslab soil gas, and/or indoor air. No single line of evidence is considered definitive, and direct measurements of vapor intrusion can be costly, especially where significant spatial and temporal variability require repeated measurements at multiple locations to accurately assess the chronic risks of long-term exposure to volatile organic compounds (VOCs) like chloroform, perchloroethylene (PCE), and trichloroethylene (TCE).

A novel fiber-optic measurement system for the evaluation of performances of neonatal pulmonary ventilators

NASA Astrophysics Data System (ADS)

Battista, L.; Scorza, A.; Botta, F.; Sciuto, S. A.

2016-02-01

Published standards for the performance evaluation of pulmonary ventilators are mainly directed to manufacturers rather than to end-users and often considered inadequate or not comprehensive. In order to contribute to overcome the problems above, a novel measurement system was proposed and tested with waveforms of mechanical ventilation by means of experimental trials carried out with infant ventilators typically used in neonatal intensive care units: the main quantities of mechanical ventilation in newborns are monitored, i.e. air flow rate, differential pressure and volume from infant ventilator are measured by means of two novel fiber-optic sensors (OFSs) developed and characterized by the authors, while temperature and relative humidity of air mass are obtained by two commercial transducers. The proposed fiber-optic sensors (flow sensor Q-OFS, pressure sensor P-OFS) showed measurement ranges of air flow and pressure typically encountered in neonatal mechanical ventilation, i.e. the air flow rate Q ranged from 3 l min-1 to 18 l min-1 (inspiratory) and from  -3 l min-1 to  -18 l min-1 (expiratory), the differential pressure ΔP ranged from  -15 cmH2O to 15 cmH2O. In each experimental trial carried out with different settings of the ventilator, outputs of the OFSs are compared with data from two reference sensors (reference flow sensor RF, reference pressure sensor RP) and results are found consistent: flow rate Q showed a maximum error between Q-OFS and RF up to 13 percent, with an output ratio Q RF/Q OFS of not more than 1.06  ±  0.09 (least square estimation, 95 percent confidence level, R 2 between 0.9822 and 0.9931). On the other hand the maximum error between P-OFS and RP on differential pressure ΔP was lower than 10 percent, with an output ratio ΔP RP/ΔP OFS between 0.977  ±  0.022 and 1.0  ±  0.8 (least square estimation, 95 percent confidence level, R 2 between 0.9864 and 0.9876). Despite the possible improvements, results were encouraging and suggested the proposed measurement system can be considered suitable for performances evaluation of neonatal ventilators and useful for both end-users and manufacturers.

Differentiating organic and conventional sage by chromatographic and mass spectrometry flow-injection fingerprints

USDA-ARS?s Scientific Manuscript database

High performance liquid chromatography (UPLC) and flow injection electrospray ionization with ion trap mass spectrometry (FIMS) fingerprints combined with the principal component analysis (PCA) were examined for their potential in differentiating commercial organic and conventional sage samples. The...

Reduction of noise radiated from open pipe terminations

NASA Astrophysics Data System (ADS)

Davis, M. R.

1989-07-01

A modified Quincke tube has been tested to determine the extent to which sound radiation from an open tube end can be reduced by conversion of the monopole source into a dipole form. It has been found that directivity patterns of the dipole with approximately 20 dB variation can be achieved provided that the out-of-phase tube ends are not too closely spaced. Very large spacings also reduce the effectiveness of the arrangement in reducing radiated power since the source system does not then approximate a simple dipole. Consideration has been given to compact designs which achieve path length differentials by the use of four concentric tubes. The relative size of the two acoustic paths has to be adjusted to allow for the size effect on radiation, requiring a somewhat larger area for the smaller tube. Through flow would require an opposite adjustment of the smaller tube area in this case if the smaller tube presented a smaller resistance to flow, as is likely since it involves straight-through flow. Flow through the system would increase the tuned operating frequency.

Detecting the existence of gene flow between Spanish and North African goats through a coalescent approach.

PubMed

Martínez, Amparo; Manunza, Arianna; Delgado, Juan Vicente; Landi, Vincenzo; Adebambo, Ayotunde; Ismaila, Muritala; Capote, Juan; El Ouni, Mabrouk; Elbeltagy, Ahmed; Abushady, Asmaa M; Galal, Salah; Ferrando, Ainhoa; Gómez, Mariano; Pons, Agueda; Badaoui, Bouabid; Jordana, Jordi; Vidal, Oriol; Amills, Marcel

2016-12-14

Human-driven migrations are one of the main processes shaping the genetic diversity and population structure of domestic species. However, their magnitude and direction have been rarely analysed in a statistical framework. We aimed to estimate the impact of migration on the population structure of Spanish and African goats. To achieve this goal, we analysed a dataset of 1,472 individuals typed with 23 microsatellites. Population structure of African and Spanish goats was moderate (mean F ST  = 0.07), with the exception of the Canarian and South African breeds that displayed a significant differentiation when compared to goats from North Africa and Nigeria. Measurement of gene flow with Migrate-n and IMa coalescent genealogy samplers supported the existence of a bidirectional gene flow between African and Spanish goats. Moreover, IMa estimates of the effective number of migrants were remarkably lower than those calculated with Migrate-n and classical approaches. Such discrepancies suggest that recent divergence, rather than extensive gene flow, is the main cause of the weak population structure observed in caprine breeds.

Detecting the existence of gene flow between Spanish and North African goats through a coalescent approach

PubMed Central

Martínez, Amparo; Manunza, Arianna; Delgado, Juan Vicente; Landi, Vincenzo; Adebambo, Ayotunde; Ismaila, Muritala; Capote, Juan; El Ouni, Mabrouk; Elbeltagy, Ahmed; Abushady, Asmaa M.; Galal, Salah; Ferrando, Ainhoa; Gómez, Mariano; Pons, Agueda; Badaoui, Bouabid; Jordana, Jordi; Vidal, Oriol; Amills, Marcel

2016-01-01

Human-driven migrations are one of the main processes shaping the genetic diversity and population structure of domestic species. However, their magnitude and direction have been rarely analysed in a statistical framework. We aimed to estimate the impact of migration on the population structure of Spanish and African goats. To achieve this goal, we analysed a dataset of 1,472 individuals typed with 23 microsatellites. Population structure of African and Spanish goats was moderate (mean FST = 0.07), with the exception of the Canarian and South African breeds that displayed a significant differentiation when compared to goats from North Africa and Nigeria. Measurement of gene flow with Migrate-n and IMa coalescent genealogy samplers supported the existence of a bidirectional gene flow between African and Spanish goats. Moreover, IMa estimates of the effective number of migrants were remarkably lower than those calculated with Migrate-n and classical approaches. Such discrepancies suggest that recent divergence, rather than extensive gene flow, is the main cause of the weak population structure observed in caprine breeds. PMID:27966592

Substorm-related plasma sheet motions as determined from differential timing of plasma changes at the ISEE satellites

NASA Technical Reports Server (NTRS)

Forbes, T. G.; Hones, E. W., Jr.; Bame, S. J.; Asbridge, J. R.; Paschmann, G.; Sckopke, N.; Russell, C. T.

1981-01-01

From an ISEE survey of substorm dropouts and recoveries during the period February 5 to May 25, 1978, 66 timing events observed by the Los Alamos Scientific Laboratory/Max-Planck-Institut Fast Plasma Experiments were studied in detail. Near substorm onset, both the average timing velocity and the bulk flow velocity at the edge of the plasma sheet are inward, toward the center. Measured normal to the surface of the plasma sheet, the timing velocity is 23 + or - 18 km/s and the proton flow velocity is 20 + or - 8 km/s. During substorm recovery, the plasma sheet reappears moving outward with an average timing velocity of 133 + or - 31 km/s; however, the corresponding proton flow velocity is only 3 + or - 7 km/s in the same direction. It is suggested that the difference between the average timing velocity for the expansion of the plasma sheet and the plasma bulk flow perpendicular to the surface of the sheet during substorm recovery is most likely the result of surface waves moving past the position of the satellites.

Analytical study of magnetohydrodynamic propulsion stability

NASA Astrophysics Data System (ADS)

Abdollahzadeh Jamalabadi, M. Y.

2014-09-01

In this paper an analytical solution for the stability of the fully developed flow drive in a magneto-hydro-dynamic pump with pulsating transverse Eletro-magnetic fields is presented. To do this, a theoretical model of the flow is developed and the analytical results are obtained for both the cylindrical and Cartesian configurations that are proper to use in the propulsion of marine vessels. The governing parabolic momentum PDEs are transformed into an ordinary differential equation using approximate velocity distribution. The numerical results are obtained and asymptotic analyses are built to discover the mathematical behavior of the solutions. The maximum velocity in a magneto-hydro-dynamic pump versus time for various values of the Stuart number, electro-magnetic interaction number, Reynolds number, aspect ratio, as well as the magnetic and electrical angular frequency and the shift of the phase angle is presented. Results show that for a high Stuart number there is a frequency limit for stability of the fluid flow in a certain direction of the flow. This stability frequency is dependent on the geometric parameters of a channel.

Solar receiver protection means and method for loss of coolant flow

DOEpatents

Glasgow, L.E.

1980-11-24

An apparatus and method are disclosed for preventing a solar receiver utilizing a flowing coolant liquid for removing heat energy therefrom from overheating after a loss of coolant flow. Solar energy is directed to the solar receiver by a plurality of reflectors which rotate so that they direct solar energy to the receiver as the earth rotates. The apparatus disclosed includes a first storage tank for containing a first predetermined volume of the coolant and a first predetermined volume of gas at a first predetermined pressure. The first storage tank includes an inlet and outlet through which the coolant can enter and exit. The apparatus also includes a second storage tank for containing a second predetermined volume of the coolant and a second predetermined volume of the gas at a second predetermined pressure, the second storage tank having an inlet through which the coolant can enter. The first and second storage tanks are in fluid communication with each other through the solar receiver. The first and second predetermined coolant volumes, the first and second gas volumes, and the first and second predetermined pressures are chosen so that a predetermined volume of the coolant liquid at a predetermined rate profile will flow from the first storage tank through the solar receiver and into the second storage tank. Thus, in the event of a power failure so that coolant flow ceases and the solar reflectors stop rotating, a flow rate maintained by the pressure differential between the first and second storage tanks will be sufficient to maintain the coolant in the receiver below a predetermined upper temperature until the solar reflectors become defocused with respect to the solar receiver due to the earth's rotation.

Laser Doppler imaging of genital blood flow: a direct measure of female sexual arousal.

PubMed

Waxman, Samantha E; Pukall, Caroline F

2009-08-01

Female sexual arousal is a challenging construct to measure, partly because of the subtle nature of its indicators, vaginal lubrication and genital swelling. As a result, many instruments have been used in an attempt to accurately measure it; however, problems are associated with each. Furthermore, the relationship between subjective and physiological indicators of arousal appears to be influenced by the instrument used to measure physiological arousal. Specifically, instruments measuring physiological arousal internally yield lower correlations between measures of physiological and subjective arousal than instruments examining the external genitals. Laser Doppler imaging (LDI) is a direct measure of external genital blood flow. The purpose of this study was to investigate the usefulness of LDI for measuring genital blood flow in women in response to erotic visual stimuli, and to explore the relationship between physiological and subjective sexual arousal. Sixty-five participants watched three 15-minute films during LDI scanning. Two nature films (measuring acclimatization and baseline blood flow levels) and one randomly assigned experimental film (erotic, anxiety, humor, or neutral) were used. Participants rated their level of subjective arousal following the third film. Results indicated a significant effect of film condition on genital blood flow, P < 0.001, with the erotic condition differing significantly from the other three conditions. In terms of the relationship between physiological and subjective sexual arousal, physiological arousal was significantly predicted by subjective ratings of sexual arousal (P < 0.001). LDI appears to be able to differentiate blood flow during erotic and nonerotic conditions. In addition, physiological sexual arousal was significantly predicted by women's reported subjective sexual arousal. These findings suggest that LDI is a useful instrument for measuring female sexual arousal, and that women may be more aware of their level of physiological arousal than previously assumed.

Topographic and Stochastic Influences on Pahoehoe Lava Lobe Emplacement

NASA Technical Reports Server (NTRS)

Hamilton, Christopher W.; Glaze, Lori S.; James, Mike R.; Baloga, Stephen M.

2013-01-01

A detailed understanding of pahoehoe emplacement is necessary for developing accurate models of flow field development, assessing hazards, and interpreting the significance of lava morphology on Earth and other planetary surfaces. Active pahoehoe lobes on Kilauea Volcano, Hawaii, were examined on 21-26 February 2006 using oblique time-series stereo-photogrammetry and differential global positioning system (DGPS) measurements. During this time, the local discharge rate for peripheral lava lobes was generally constant at 0.0061 +/- 0.0019 m3/s, but the areal coverage rate of the lobes exhibited a periodic increase every 4.13 +/- 0.64 minutes. This periodicity is attributed to the time required for the pressure within the liquid lava core to exceed the cooling induced strength of its margins. The pahoehoe flow advanced through a series of down slope and cross-slope breakouts, which began as approximately 0.2 m-thick units (i.e., toes) that coalesced and inflated to become approximately meter-thick lobes. The lobes were thickest above the lowest points of the initial topography and above shallow to reverse facing slopes, defined relative to the local flow direction. The flow path was typically controlled by high-standing topography, with the zone directly adjacent to the final lobe margin having an average relief that was a few centimeters higher than the lava inundated region. This suggests that toe-scale topography can, at least temporarily, exert strong controls on pahoehoe flow paths by impeding the lateral spreading of the lobe. Observed cycles of enhanced areal spreading and inflated lobe morphology are also explored using a model that considers the statistical likelihood of sequential breakouts from active flow margins and the effects of topographic barriers.

Ex vivo detection of apoptotic trophoblast cells applying flow cytofluorometry and immunocytochemistry using M30 antibody directed to the cytokeratin 18 neo-epitope.

PubMed

Krol, Janna; Mengele, Karin; Ottl-Mantchenko, Irina; Welk, Anita; Wasilewitsch, Irina; von Steinburg, Stephanie Pildner; Schneider, Karl-Theodor M; Schmitt, Manfred

2005-09-01

Apoptosis of placental trophoblast cells has become the subject of intensive research. Recently, a monoclonal antibody (M30) directed against a neo-epitope of cytokeratin 18, that is formed after cleavage of this cytoskeletal protein by caspases, was shown to be of advantage over other tests for the detection of trophoblast cell apoptosis. In the present study, we describe a method for the enrichment of highly pure villous trophoblast cells based on the proteolytic digestion of placental tissue, density gradient separation of dissected cells, and immunoelimination of contaminating, non-trophoblast cells employing an antibody to the HLA class I antigen. The high purity (94-99%) of the trophoblast cell preparation was shown by antibody staining for cytokeratin 7 and absence of vimentin. Furthermore, we demonstrate that after a simple permeabilization and fixation step with 90% methanol and using the M30 CytoDeath, FITC-conjugated antibody, apoptotic trophoblast cells could be distinguished from non-apoptotic cells by flow cytofluorometry in a highly quantitative and sensitive fashion. Our protocol is an improvement over previously used methods such as immunocytochemistry as it allows to differentiate rapidly between competent and apoptotic trophoblast cells by the quantitative method of flow cytofluorometry.

Elliptic Relaxation of a Tensor Representation for the Redistribution Terms in a Reynolds Stress Turbulence Model

NASA Technical Reports Server (NTRS)

Carlson, J. R.; Gatski, T. B.

2002-01-01

A formulation to include the effects of wall proximity in a second-moment closure model that utilizes a tensor representation for the redistribution terms in the Reynolds stress equations is presented. The wall-proximity effects are modeled through an elliptic relaxation process of the tensor expansion coefficients that properly accounts for both correlation length and time scales as the wall is approached. Direct numerical simulation data and Reynolds stress solutions using a full differential approach are compared for the case of fully developed channel flow.

Numerical study of unsteady Williamson fluid flow and heat transfer in the presence of MHD through a permeable stretching surface

NASA Astrophysics Data System (ADS)

Bibi, Madiha; Khalil-Ur-Rehman; Malik, M. Y.; Tahir, M.

2018-04-01

In the present article, unsteady flow field characteristics of the Williamson fluid model are explored. The nanosized particles are suspended in the flow regime having the interaction of a magnetic field. The fluid flow is induced due to a stretching permeable surface. The flow model is controlled through coupled partial differential equations to the used shooting method for a numerical solution. The obtained partial differential equations are converted into ordinary differential equations as an initial value problem. The shooting method is used to find a numerical solution. The mathematical modeling yields physical parameters, namely the Weissenberg number, the Prandtl number, the unsteadiness parameter, the magnetic parameter, the mass transfer parameter, the Lewis number, the thermophoresis parameter and Brownian parameters. It is found that the Williamson fluid velocity, temperature and nanoparticles concentration are a decreasing function of the unsteadiness parameter.

Bi-directional exchange of membrane components occurs during co-culture of mesenchymal stem cells and nucleus pulposus cells.

PubMed

Strassburg, Sandra; Hodson, Nigel W; Hill, Patrick I; Richardson, Stephen M; Hoyland, Judith A

2012-01-01

Mesenchymal stem cell (MSC)-based therapies have been proposed as novel treatments for intervertebral disc (IVD) degeneration. We have previously demonstrated that when MSCs are co-cultured with nucleus pulposus (NP) cells with direct cell-cell contact, they differentiate along the NP lineage and simultaneously stimulate the degenerate NP cell population to regain a normal (non-degenerate) phenotype, an effect which requires cell-cell communication. However, the mechanisms by which NP cells and MSCs interact in this system are currently unclear. Thus, in this study we investigated a range of potential mechanisms for exchange of cellular components or information that may direct these changes, including cell fusion, gap-junctional communication and exchange of membrane components by direct transfer or via microvesicle formation. Flow cytometry of fluorescently labeled MSCs and NP cells revealed evidence of some cell fusion and formation of gapjunctions, although at the three timepoints studied these phenomena were detectable only in a small proportion of cells. While these mechanisms may play a role in cell-cell communication, the data suggests they are not the predominant mechanism of interaction. However, flow cytometry of fluorescently dual-labeled cells showed that extensive bi-directional transfer of membrane components is operational during direct co-culture of MSCs and NP cells. Furthermore, there was also evidence for secretion and internalization of membrane-bound microvesicles by both cell types. Thus, this study highlights bi-directional intercellular transfer of membrane components as a possible mechanism of cellular communication between MSC and NP cells.

Three-dimensional modelling of thin liquid films over spinning disks

NASA Astrophysics Data System (ADS)

Zhao, Kun; Wray, Alex; Yang, Junfeng; Matar, Omar

2016-11-01

In this research the dynamics of a thin film flowing over a rapidly spinning, horizontal disk is considered. A set of non-axisymmetric evolution equations for the film thickness, radial and azimuthal flow rates are derived using a boundary-layer approximation in conjunction with the Karman-Polhausen approximation for the velocity distribution in the film. These highly nonlinear partial differential equations are then solved numerically in order to reveal the formation of two and three-dimensional large-amplitude waves that travel from the disk inlet to its periphery. The spatio-temporal profile of film thickness provides us with visualization of flow structures over the entire disk and by varying system parameters(volumetric flow rate of fluid and rotational speed of disk) different wave patterns can be observed, including spiral, concentric, smooth waves and wave break-up in exceptional conditions. Similar types of waves can be found by experimentalists in literature and CFD simulation and our results show good agreement with both experimental and CFD results. Furthermore, the semi-parabolic velocity profile assumed in our model under the waves is directly compared with CFD data in various flow regimes in order to validate our model. EPSRC UK Programme Grant EP/K003976/1.

Analysis of high-speed rotating flow inside gas centrifuge casing

NASA Astrophysics Data System (ADS)

Pradhan, Sahadev, , Dr.

2017-10-01

The generalized analytical model for the radial boundary layer inside the gas centrifuge casing in which the inner cylinder is rotating at a constant angular velocity Ω_i while the outer one is stationary, is formulated for studying the secondary gas flow field due to wall thermal forcing, inflow/outflow of light gas along the boundaries, as well as due to the combination of the above two external forcing. The analytical model includes the sixth order differential equation for the radial boundary layer at the cylindrical curved surface in terms of master potential (χ) , which is derived from the equations of motion in an axisymmetric (r - z) plane. The linearization approximation is used, where the equations of motion are truncated at linear order in the velocity and pressure disturbances to the base flow, which is a solid-body rotation. Additional approximations in the analytical model include constant temperature in the base state (isothermal compressible Couette flow), high aspect ratio (length is large compared to the annular gap), high Reynolds number, but there is no limitation on the Mach number. The discrete eigenvalues and eigenfunctions of the linear operators (sixth-order in the radial direction for the generalized analytical equation) are obtained. The solutions for the secondary flow is determined in terms of these eigenvalues and eigenfunctions. These solutions are compared with direct simulation Monte Carlo (DSMC) simulations and found excellent agreement (with a difference of less than 15%) between the predictions of the analytical model and the DSMC simulations, provided the boundary conditions in the analytical model are accurately specified.

Analysis of high-speed rotating flow inside gas centrifuge casing

NASA Astrophysics Data System (ADS)

Pradhan, Sahadev, , Dr.

2017-09-01

The generalized analytical model for the radial boundary layer inside the gas centrifuge casing in which the inner cylinder is rotating at a constant angular velocity Ωi while the outer one is stationary, is formulated for studying the secondary gas flow field due to wall thermal forcing, inflow/outflow of light gas along the boundaries, as well as due to the combination of the above two external forcing. The analytical model includes the sixth order differential equation for the radial boundary layer at the cylindrical curved surface in terms of master potential (χ) , which is derived from the equations of motion in an axisymmetric (r - z) plane. The linearization approximation is used, where the equations of motion are truncated at linear order in the velocity and pressure disturbances to the base flow, which is a solid-body rotation. Additional approximations in the analytical model include constant temperature in the base state (isothermal compressible Couette flow), high aspect ratio (length is large compared to the annular gap), high Reynolds number, but there is no limitation on the Mach number. The discrete eigenvalues and eigenfunctions of the linear operators (sixth-order in the radial direction for the generalized analytical equation) are obtained. The solutions for the secondary flow is determined in terms of these eigenvalues and eigenfunctions. These solutions are compared with direct simulation Monte Carlo (DSMC) simulations and found excellent agreement (with a difference of less than 15%) between the predictions of the analytical model and the DSMC simulations, provided the boundary conditions in the analytical model are accurately specified.

Analysis of high-speed rotating flow inside gas centrifuge casing

NASA Astrophysics Data System (ADS)

Pradhan, Sahadev

2017-11-01

The generalized analytical model for the radial boundary layer inside the gas centrifuge casing in which the inner cylinder is rotating at a constant angular velocity Ωi while the outer one is stationary, is formulated for studying the secondary gas flow field due to wall thermal forcing, inflow/outflow of light gas along the boundaries, as well as due to the combination of the above two external forcing. The analytical model includes the sixth order differential equation for the radial boundary layer at the cylindrical curved surface in terms of master potential (χ) , which is derived from the equations of motion in an axisymmetric (r - z) plane. The linearization approximation is used, where the equations of motion are truncated at linear order in the velocity and pressure disturbances to the base flow, which is a solid-body rotation. Additional approximations in the analytical model include constant temperature in the base state (isothermal compressible Couette flow), high aspect ratio (length is large compared to the annular gap), high Reynolds number, but there is no limitation on the Mach number. The discrete eigenvalues and eigenfunctions of the linear operators (sixth-order in the radial direction for the generalized analytical equation) are obtained. The solutions for the secondary flow is determined in terms of these eigenvalues and eigenfunctions. These solutions are compared with direct simulation Monte Carlo (DSMC) simulations and found excellent agreement (with a difference of less than 15%) between the predictions of the analytical model and the DSMC simulations, provided the boundary conditions in the analytical model are accurately specified.

Comparing cerebral perfusion in Alzheimer's disease and Parkinson's disease dementia: an ASL-MRI study.

PubMed

Le Heron, Campbell J; Wright, Sarah L; Melzer, Tracy R; Myall, Daniel J; MacAskill, Michael R; Livingston, Leslie; Keenan, Ross J; Watts, Richard; Dalrymple-Alford, John C; Anderson, Tim J

2014-06-01

Emerging evidence suggests that Alzheimer's disease (AD) and Parkinson's disease dementia (PDD) share neurodegenerative mechanisms. We sought to directly compare cerebral perfusion in these two conditions using arterial spin labeling magnetic resonance imaging (ASL-MRI). In total, 17 AD, 20 PDD, and 37 matched healthy controls completed ASL and structural MRI, and comprehensive neuropsychological testing. Alzheimer's disease and PDD perfusion was analyzed by whole-brain voxel-based analysis (to assess absolute blood flow), a priori specified region of interest analysis, and principal component analysis (to generate a network differentiating the two groups). Corrections were made for cerebral atrophy, age, sex, education, and MRI scanner software version. Analysis of absolute blood flow showed no significant differences between AD and PDD. Comparing each group with controls revealed an overlapping, posterior pattern of hypoperfusion, including posterior cingulate gyrus, precuneus, and occipital regions. The perfusion network that differentiated AD and PDD groups identified relative differences in medial temporal lobes (AD

Toxic hydrogen sulfide and dark caves: phenotypic and genetic divergence across two abiotic environmental gradients in Poecilia mexicana.

PubMed

Tobler, Michael; Dewitt, Thomas J; Schlupp, Ingo; García de León, Francisco J; Herrmann, Roger; Feulner, Philine G D; Tiedemann, Ralph; Plath, Martin

2008-10-01

Divergent natural selection drives evolutionary diversification. It creates phenotypic diversity by favoring developmental plasticity within populations or genetic differentiation and local adaptation among populations. We investigated phenotypic and genetic divergence in the livebearing fish Poecilia mexicana along two abiotic environmental gradients. These fish typically inhabit nonsulfidic surface rivers, but also colonized sulfidic and cave habitats. We assessed phenotypic variation among a factorial combination of habitat types using geometric and traditional morphometrics, and genetic divergence using quantitative and molecular genetic analyses. Fish in caves (sulfidic or not) exhibited reduced eyes and slender bodies. Fish from sulfidic habitats (surface or cave) exhibited larger heads and longer gill filaments. Common-garden rearing suggested that these morphological differences are partly heritable. Population genetic analyses using microsatellites as well as cytochrome b gene sequences indicate high population differentiation over small spatial scale and very low rates of gene flow, especially among different habitat types. This suggests that divergent environmental conditions constitute barriers to gene flow. Strong molecular divergence over short distances as well as phenotypic and quantitative genetic divergence across habitats in directions classic to fish ecomorphology suggest that divergent selection is structuring phenotypic variation in this system.

Characteristics of melting heat transfer during flow of Carreau fluid induced by a stretching cylinder.

PubMed

Hashim; Khan, Masood; Saleh Alshomrani, Ali

2017-01-01

This article provides a comprehensive analysis of the energy transportation by virtue of the melting process of high-temperature phase change materials. We have developed a two-dimensional model for the boundary layer flow of non-Newtonian Carreau fluid. It is assumed that flow is caused by stretching of a cylinder in the axial direction by means of a linear velocity. Adequate local similarity transformations are employed to determine a set of non-linear ordinary differential equations which govern the flow problem. Numerical solutions to the resultant non-dimensional boundary value problem are computed via the fifth-order Runge-Kutta Fehlberg integration scheme. The solutions are captured for both zero and non-zero curvature parameters, i.e., for flow over a flat plate or flow over a cylinder. The flow and heat transfer attributes are witnessed to be prompted in an intricate manner by the melting parameter, the curvature parameter, the Weissenberg number, the power law index and the Prandtl number. We determined that one of the possible ways to boost the fluid velocity is to increase the melting parameter. Additionally, both the velocity of the fluid and the momentum boundary layer thickness are higher in the case of flow over a stretching cylinder. As expected, the magnitude of the skin friction and the rate of heat transfer decrease by raising the values of the melting parameter and the Weissenberg number.

Electric analog of three-dimensional flow to wells and its application to unconfined aquifers

USGS Publications Warehouse

Stallman, Robert W.

1963-01-01

Electric-analog design criteria are established from the differential equations of ground-water flow for analyzing pumping-test data. A convenient analog design was obtained by transforming the cylindrical equation of flow to a rectilinear form. The design criteria were applied in the construction of an electric analog, which was used for studying pumping-test data collected near Grand Island, Nebr. Data analysis indicated (1) vertical flow components near pumping wells in unconfined aquifers may be much more significant in the control of water-table decline than radial flow components for as much as a day of pumping; (2) the specific yield during the first few minutes of pumping appears to be a very small fraction of that observed after pumping for more than 1 day; and (3) estimates of specific yield made from model studies seem much more sensitive to variations in assumed flow conditions than are estimates of permeability. Analysis of pumping-test data where vertical flow components are important requires that the degree of anisotropy be known. A procedure for computing anisotropy directly from drawdowns observed at five points was developed. Results obtained in the analog study emphasize the futility of calculating unconfined aquifer properties from pumping tests of short duration by means of equations based on the assumptions that vertical flow components are negligible and specific yield is constant.

Differentiating organic from conventional peppermints using chromatographic and flow-injection mass spectrometric (FIMS) fingerprints

USDA-ARS?s Scientific Manuscript database

High performance liquid chromatography (HPLC) and flow-injection mass spectrometric (FIMS) fingerprinting techniques were tested for their potential in differentiating organic and conventional peppermint samples. Ten organic and ten conventional peppermint samples were examined using HPLC-UV and FI...

Identification of p63+ keratinocyte progenitor cells in circulation and their matrix-directed differentiation to epithelial cells.

PubMed

Nair, Renjith P; Krishnan, Lissy K

2013-04-11

In the event of chronic diabetes or burn wounds, accomplishing skin regeneration is a major concern. Autologous skin grafting is the most effective remedy, but the tissue harvest may create more nonhealing wounds. Currently available skin substitutes have a limited clinical outcome because of immune reactions arising from the xenobiotic scaffold or allogenous cells. Autologous stem cells that can be collected without an additional injury may be a viable option for skin-tissue engineering. Presence of a low number of keratinocyte progenitor cells (KPCs) within the peripheral blood mononuclear cell (PBMNC) population has been indicated. Identification, isolation, expansion, and differentiation of KPCs is necessary before they are considered for skin regeneration, which is the focus of this study. Culture of isolated human PBMNCs on a cell-specific matrix was carried out to induce differentiation of KPCs. Flow cytometry and reverse transcriptase polymerase chain reaction were done for epithelial stem cell marker p63 and lineage markers cytokeratin 5 and cytokeratin 14, to track differentiation. Proliferation was confirmed by quantifying the proliferating cell nuclear antigen-expressing cells. Immunostaining with epithelial cell markers, involucrin and filaggrin, was carried out to establish terminal differentiation. Microscopic analysis confirmed growth and survival of KPCs on the dermal fibroblast monolayer and on a transplantable fibrin sheet. We demonstrated that KPCs are p63(+) and CD34-. The specifically designed composition of the extracellular matrix was found to support selective adhesion, proliferation, and differentiation of p63(+) KPCs. The PBMNC culture for 12 days under controlled conditions resulted in a homogenous population that expressed cytokeratins, and >90% of the cells were found to proliferate. Subculture for 5 days resulted in expression of filaggrin and involucrin, suggesting terminal differentiation. Transfer of matrix-selected KPCs to a dermal fibroblast monolayer or fibrin supported cell proliferation and showed typical hexagonal morphology of keratinocytes within 15 days. Circulating KPCs were identified with p63, which differentiated into keratinocytes with expression of the cytokeratins, involucrin and filaggrin. Components of the specifically designed matrix favored KPC attachment, directed differentiation, and may turn out to be a potential vehicle for cell transplantation.

Identification of p63+ keratinocyte progenitor cells in circulation and their matrix-directed differentiation to epithelial cells

PubMed Central

2013-01-01

Introduction In the event of chronic diabetes or burn wounds, accomplishing skin regeneration is a major concern. Autologous skin grafting is the most effective remedy, but the tissue harvest may create more nonhealing wounds. Currently available skin substitutes have a limited clinical outcome because of immune reactions arising from the xenobiotic scaffold or allogenous cells. Autologous stem cells that can be collected without an additional injury may be a viable option for skin-tissue engineering. Presence of a low number of keratinocyte progenitor cells (KPCs) within the peripheral blood mononuclear cell (PBMNC) population has been indicated. Identification, isolation, expansion, and differentiation of KPCs is necessary before they are considered for skin regeneration, which is the focus of this study. Methods Culture of isolated human PBMNCs on a cell-specific matrix was carried out to induce differentiation of KPCs. Flow cytometry and reverse transcriptase polymerase chain reaction were done for epithelial stem cell marker p63 and lineage markers cytokeratin 5 and cytokeratin 14, to track differentiation. Proliferation was confirmed by quantifying the proliferating cell nuclear antigen-expressing cells. Immunostaining with epithelial cell markers, involucrin and filaggrin, was carried out to establish terminal differentiation. Microscopic analysis confirmed growth and survival of KPCs on the dermal fibroblast monolayer and on a transplantable fibrin sheet. Results We demonstrated that KPCs are p63+ and CD34-. The specifically designed composition of the extracellular matrix was found to support selective adhesion, proliferation, and differentiation of p63+ KPCs. The PBMNC culture for 12 days under controlled conditions resulted in a homogenous population that expressed cytokeratins, and >90% of the cells were found to proliferate. Subculture for 5 days resulted in expression of filaggrin and involucrin, suggesting terminal differentiation. Transfer of matrix-selected KPCs to a dermal fibroblast monolayer or fibrin supported cell proliferation and showed typical hexagonal morphology of keratinocytes within 15 days. Conclusions Circulating KPCs were identified with p63, which differentiated into keratinocytes with expression of the cytokeratins, involucrin and filaggrin. Components of the specifically designed matrix favored KPC attachment, directed differentiation, and may turn out to be a potential vehicle for cell transplantation. PMID:23578397

Phosphatidylserine as an anchor for plasminogen and its plasminogen receptor, Histone H2B, to the macrophage surface

PubMed Central

DAS, R.; PLOW, E. F.

2013-01-01

Summary Background Plasminogen (Plg) binding to cell surface Plg receptors (Plg-Rs) on the surface of macrophages facilitates Plg activation and migration of these cells. Histone H2B (H2B) acts as a Plg-R and its cell surface expression is upregulated when monocytes are differentiated to macrophages via a pathway dependent on L-type Ca2+ channels and intracellular Ca2+. Objectives We sought to investigate the mechanism by which H2B, a protein without a transmembrane domain, is retained on themacrophage surface. Methods THP-1 monocytoid cells were induced to differentiate with interferon gamma + Vitamin D3 or to undergo apoptosis by treatment with camptothecin. Flow cytometry and cell surface biotinylation followed by Western blotting were used to measure the interrelationship between Plg binding, cell surface expression of H2B and outermembrane exposure of phosphatidylserine (PS). Results H2B interacted directly with PS via an electrostatic interaction. Anti-PS or PS binding proteins, annexin V and protein S, diminished H2B interaction with PS on the surface of differentiated or apoptotic cells and these same reagents inhibited Plg binding to these cells. L-type Ca2+ channels played a significant role in PS exposure, H2B surface expression and Plg binding induced either by differentiation or apoptosis. Conclusions These data suggest that H2B tethers to the surface of cells by interacting with PS on differentiated or apoptotic monocytoid cells. L-type Ca2+ channels regulate PS exposure on the surface of these cells. The exposed PS interacts directly with H2B and hence provides sites for Plg to bind to. PMID:21040449

Tunable osteogenic differentiation of hMPCs in tubular perfusion system bioreactor.

PubMed

Nguyen, Bao-Ngoc B; Ko, Henry; Fisher, John P

2016-08-01

The use of bioreactors for bone tissue engineering has been widely investigated. While the benefits of shear stress on osteogenic differentiation are well known, the underlying effects of dynamic culture on subpopulations within a bioreactor are less evident. In this work, we explore the influence of applied flow in the tubular perfusion system (TPS) bioreactor on the osteogenic differentiation of human mesenchymal progenitor cells (hMPCs), specifically analyzing the effects of axial position along the growth chamber. TPS bioreactor experiments conducted with unidirectional flow demonstrated enhanced expression of osteogenic markers in cells cultured downstream from the inlet flow. We utilized computational fluid dynamic modeling to confirm uniform shear stress distribution on the surface of the scaffolds and along the length of the growth chamber. The concept of paracrine signaling between cell populations was validated with the use of alternating flow, which diminished the differences in osteogenic differentiation between cells cultured at the inlet and outlet of the growth chamber. After the addition of controlled release of bone morphogenic protein-2 (BMP-2) into the system, osteogenic differentiation among subpopulations along the growth chamber was augmented, yet remained homogenous. These results allow for greater understanding of axial bioreactor cultures, their microenvironment, and how well-established parameters of osteogenic differentiation affect bone tissue development. With this work, we have demonstrated the capability of tuning osteogenic differentiation of hMPCs through the application of fluid flow and the addition of exogenous growth factors. Such precise control allows for the culture of distinct subpopulation within one dynamic system for the use of complex engineered tissue constructs. Biotechnol. Bioeng. 2016;113: 1805-1813. © 2016 Wiley Periodicals, Inc. © 2016 Wiley Periodicals, Inc.

Pressure compensated flow control valve

DOEpatents

Minteer, Daniel J.

1999-01-01

The invention is an air flow control valve which is capable of maintaining a constant flow at the outlet despite changes in the inlet or outlet pressure. The device consists of a shell assembly with an inlet chamber and outlet chamber separated by a separation plate. The chambers are connected by an orifice. Also located within the inlet chamber is a port controller assembly. The port controller assembly consists of a differential pressure plate and port cap affixed thereon. The cap is able to slide in and out of the orifice separating the inlet and outlet chambers. When the pressure differential is sufficient, the differential pressure plate rises or falls to maintain a constant air flow. Movement of the port controller assembly does not require the use of seals, diaphragms, tight tolerances, bushings, bearings, hinges, guides, or lubricants.

Numerical study of magnetohydrodynamic viscous plasma flow in rotating porous media with Hall currents and inclined magnetic field influence

NASA Astrophysics Data System (ADS)

Bég, O. Anwar; Sim, Lik; Zueco, J.; Bhargava, R.

2010-02-01

A numerical solution is developed for the viscous, incompressible, magnetohydrodynamic flow in a rotating channel comprising two infinite parallel plates and containing a Darcian porous medium, the plates lying in the x-z plane, under constant pressure gradient. The system is subjected to a strong, inclined magnetic field orientated to the positive direction of the y-axis (rotational axis, normal to the x-z plane). The Navier-Stokes flow equations for a general rotating hydromagnetic flow are reduced to a pair of linear, viscous partial differential equations neglecting convective acceleration terms, for primary velocity (u‧) and secondary velocity (v‧) where these velocities are directed along the x and y axes. Only viscous terms are retained in the momenta equations. The model is non-dimensionalized and shown to be controlled by a number of dimensionless parameters. The resulting dimensionless ordinary differential equations are solved using a robust numerical method, Network Simulation Methodology. Full details of the numerics are provided. The present solutions are also benchmarked against the analytical solutions presented recently by Ghosh and Pop [Ghosh SK, Pop I. An analytical approach to MHD plasma behaviour of a rotating environment in the presence of an inclined magnetic field as compared to excitation frequency. Int J Appl Mech Eng 2006;11(4):845-856] for the case of a purely fluid medium (infinite permeability). We study graphically the influence of Hartmann number (Ha, magnetic field parameter), Ekman number (Ek, rotation parameter), Hall current parameter (Nh), Darcy number (Da, permeability parameter), pressure gradient (Np) and also magnetic field inclination (θ) on primary and secondary velocity fields. Additionally we investigate the effects of these multiphysical parameters on the dimensionless shear stresses at the plates. Both primary and secondary velocity are seen to be increased with a rise in Darcy number, owing to a simultaneous reduction in Darcian drag force. Primary velocity is seen to decrease with an increase in Hall current parameter (Nh) but there is a decrease in secondary velocity. The study finds important applications in magnetic materials processing, hydromagnetic plasma energy generators, magneto-geophysics and planetary astrophysics.

Computational Diffusion Magnetic Resonance Imaging Based on Time-Dependent Bloch NMR Flow Equation and Bessel Functions.

PubMed

Awojoyogbe, Bamidele O; Dada, Michael O; Onwu, Samuel O; Ige, Taofeeq A; Akinwande, Ninuola I

2016-04-01

Magnetic resonance imaging (MRI) uses a powerful magnetic field along with radio waves and a computer to produce highly detailed "slice-by-slice" pictures of virtually all internal structures of matter. The results enable physicians to examine parts of the body in minute detail and identify diseases in ways that are not possible with other techniques. For example, MRI is one of the few imaging tools that can see through bones, making it an excellent tool for examining the brain and other soft tissues. Pulsed-field gradient experiments provide a straightforward means of obtaining information on the translational motion of nuclear spins. However, the interpretation of the data is complicated by the effects of restricting geometries as in the case of most cancerous tissues and the mathematical concept required to account for this becomes very difficult. Most diffusion magnetic resonance techniques are based on the Stejskal-Tanner formulation usually derived from the Bloch-Torrey partial differential equation by including additional terms to accommodate the diffusion effect. Despite the early success of this technique, it has been shown that it has important limitations, the most of which occurs when there is orientation heterogeneity of the fibers in the voxel of interest (VOI). Overcoming this difficulty requires the specification of diffusion coefficients as function of spatial coordinate(s) and such a phenomenon is an indication of non-uniform compartmental conditions which can be analyzed accurately by solving the time-dependent Bloch NMR flow equation analytically. In this study, a mathematical formulation of magnetic resonance flow sequence in restricted geometry is developed based on a general second order partial differential equation derived directly from the fundamental Bloch NMR flow equations. The NMR signal is obtained completely in terms of NMR experimental parameters. The process is described based on Bessel functions and properties that can make it possible to distinguish cancerous cells from normal cells. A typical example of liver distinguished from gray matter, white matter and kidney is demonstrated. Bessel functions and properties are specifically needed to show the direct effect of the instantaneous velocity on the NMR signal originating from normal and abnormal tissues.

Method and system for measuring multiphase flow using multiple pressure differentials

DOEpatents

Fincke, James R.

2001-01-01

An improved method and system for measuring a multiphase flow in a pressure flow meter. An extended throat venturi is used and pressure of the multiphase flow is measured at three or more positions in the venturi, which define two or more pressure differentials in the flow conduit. The differential pressures are then used to calculate the mass flow of the gas phase, the total mass flow, and the liquid phase. The method for determining the mass flow of the high void fraction fluid flow and the gas flow includes certain steps. The first step is calculating a gas density for the gas flow. The next two steps are finding a normalized gas mass flow rate through the venturi and computing a gas mass flow rate. The following step is estimating the gas velocity in the venturi tube throat. The next step is calculating the pressure drop experienced by the gas-phase due to work performed by the gas phase in accelerating the liquid phase between the upstream pressure measuring point and the pressure measuring point in the venturi throat. Another step is estimating the liquid velocity in the venturi throat using the calculated pressure drop experienced by the gas-phase due to work performed by the gas phase. Then the friction is computed between the liquid phase and a wall in the venturi tube. Finally, the total mass flow rate based on measured pressure in the venturi throat is calculated, and the mass flow rate of the liquid phase is calculated from the difference of the total mass flow rate and the gas mass flow rate.

Thermophysical effects of carbon nanotubes on MHD flow over a stretching surface

NASA Astrophysics Data System (ADS)

Ul Haq, Rizwan; Khan, Zafar Hayat; Khan, Waqar Ahmed

2014-09-01

This article is intended for investigating the effects of magnetohydrodynamics (MHD) and volume fraction of carbon nanotubes (CNTs) on the flow and heat transfer in two lateral directions over a stretching sheet. For this purpose, three types of base fluids specifically water, ethylene glycol and engine oil with single and multi-walled carbon nanotubes are used in the analysis. The convective boundary condition in the presence of CNTs is presented first time and not been explored so far. The transformed nonlinear differential equations are solved by the Runge-Kutta-Fehlberg method with a shooting technique. The dimensionless velocity and shear stress are obtained in both directions. The dimensionless heat transfer is determined on the surface. Three different models of thermal conductivity are comparable for both CNTs and it is found that the Xue [1] model gives the best approach to guess the superb thermal conductivity in comparison with the Maxwell [2] and Hamilton and Crosser [3] models. And finally, another finding suggests the engine oil provides the highest skin friction and heat transfer rates.

Vacuum vapor deposition

NASA Technical Reports Server (NTRS)

Poorman, Richard M. (Inventor); Weeks, Jack L. (Inventor)

1995-01-01

A method and apparatus is described for vapor deposition of a thin metallic film utilizing an ionized gas arc directed onto a source material spaced from a substrate to be coated in a substantial vacuum while providing a pressure differential between the source and the substrate so that, as a portion of the source is vaporized, the vapors are carried to the substrate. The apparatus includes a modified tungsten arc welding torch having a hollow electrode through which a gas, preferably inert, flows and an arc is struck between the electrode and the source. The torch, source, and substrate are confined within a chamber within which a vacuum is drawn. When the arc is struck, a portion of the source is vaporized and the vapors flow rapidly toward the substrate. A reflecting shield is positioned about the torch above the electrode and the source to ensure that the arc is struck between the electrode and the source at startup. The electrode and the source may be confined within a vapor guide housing having a duct opening toward the substrate for directing the vapors onto the substrate.

Oil field management system

DOEpatents

Fincke, James R.

2003-09-23

Oil field management systems and methods for managing operation of one or more wells producing a high void fraction multiphase flow. The system includes a differential pressure flow meter which samples pressure readings at various points of interest throughout the system and uses pressure differentials derived from the pressure readings to determine gas and liquid phase mass flow rates of the high void fraction multiphase flow. One or both of the gas and liquid phase mass flow rates are then compared with predetermined criteria. In the event such mass flow rates satisfy the predetermined criteria, a well control system implements a correlating adjustment action respecting the multiphase flow. In this way, various parameters regarding the high void fraction multiphase flow are used as control inputs to the well control system and thus facilitate management of well operations.

Group solution for unsteady free-convection flow from a vertical moving plate subjected to constant heat flux

NASA Astrophysics Data System (ADS)

Kassem, M.

2006-03-01

The problem of heat and mass transfer in an unsteady free-convection flow over a continuous moving vertical sheet in an ambient fluid is investigated for constant heat flux using the group theoretical method. The nonlinear coupled partial differential equation governing the flow and the boundary conditions are transformed to a system of ordinary differential equations with appropriate boundary conditions. The obtained ordinary differential equations are solved numerically using the shooting method. The effect of Prandlt number on the velocity and temperature of the boundary-layer is plotted in curves. A comparison with previous work is presented.

Flagellar flows around bacterial swarms

NASA Astrophysics Data System (ADS)

Dauparas, Justas; Lauga, Eric

2016-08-01

Flagellated bacteria on nutrient-rich substrates can differentiate into a swarming state and move in dense swarms across surfaces. A recent experiment measured the flow in the fluid around an Escherichia coli swarm [Wu, Hosu, and Berg, Proc. Natl. Acad. Sci. USA 108, 4147 (2011)], 10.1073/pnas.1016693108. A systematic chiral flow was observed in the clockwise direction (when viewed from above) ahead of the swarm with flow speeds of about 10 μ m /s , about 3 times greater than the radial velocity at the edge of the swarm. The working hypothesis is that this flow is due to the action of cells stalled at the edge of a colony that extend their flagellar filaments outward, moving fluid over the virgin agar. In this work we quantitatively test this hypothesis. We first build an analytical model of the flow induced by a single flagellum in a thin film and then use the model, and its extension to multiple flagella, to compare with experimental measurements. The results we obtain are in agreement with the flagellar hypothesis. The model provides further quantitative insight into the flagella orientations and their spatial distributions as well as the tangential speed profile. In particular, the model suggests that flagella are on average pointing radially out of the swarm and are not wrapped tangentially.

Measuring flows in the solar interior: current developments, results, and outstanding problems

NASA Astrophysics Data System (ADS)

Schad, Ariane

2016-10-01

I will present an overview of the current developments to determine flows in the solar interior and recent results from helioseismology. I will lay special focus on the inference of the deep structure of the meridional flow, which is one of the most challenging problems in helioseismology. In recent times, promising approaches have been developed for solving this problem. The time-distance analysis made large improvements in this after becoming aware of and compensating for a systematic effect in the analysis, the origin of which is not clear yet. In addition to this, a different approach is now available, which directly exploits the distortion of mode eigenfunctions by the meridional flow as well as rotation. These methods have presented us partly surprisingly complex meridional flow patterns, which, however, do not provide a consistent picture of the flow. Resolving this puzzle is part of current research since this has important consequences on our understanding of the solar dynamo. Another interesting discrepancy was found in recent studies between the amplitudes of the large- and small-scale dynamics in the convection zone estimated from helioseismology and those predicted from theoretical models. This raises fundamental questions how the Sun, and in general a star, maintains its heat transport and redistributes its angular momentum that lead, e.g., to the observed differential rotation.

Multicomponent-flow analyses by multimode method of characteristics

USGS Publications Warehouse

Lai, Chintu

1994-01-01

For unsteady open-channel flows having N interacting unknown variables, a system of N mutually independent, partial differential equations can be used to describe the flow-field. The system generally belongs to marching-type problems and permits transformation into characteristic equations that are associated with N distinct characteristics directions. Because characteristics can be considered 'wave' or 'disturbance' propagation, a fluvial system so described can be viewed as adequately definable using these N component waves. A numerical algorithm to solve the N families of characteristics can then be introduced for formulation of an N-component flow-simulation model. The multimode method of characteristics (MMOC), a new numerical scheme that has a combined capacity of several specified-time-interval (STI) schemes of the method of characteristics, makes numerical modeling of such N-component riverine flows feasible and attainable. Merging different STI schemes yields different kinds of MMOC schemes, for which two kinds are displayed herein. With the MMOC, each characteristics is dynamically treated by an appropriate numerical mode, which should lead to an effective and suitable global simulation, covering various types of unsteady flow. The scheme is always linearly stable and its numerical accuracy can be systematically analyzed. By increasing the N value, one can develop a progressively sophisticated model that addresses increasingly complex river-mechanics problems.

Precise nanoliter fluid handling system with integrated high-speed flow sensor.

PubMed

Haber, Carsten; Boillat, Marc; van der Schoot, Bart

2005-04-01

A system for accurate low-volume delivery of liquids in the micro- to nanoliter range makes use of an integrated miniature flow sensor as part of an intelligent feedback control loop driving a micro-solenoid valve. The flow sensor is hydraulically connected with the pressurized system liquid in the dispensing channel and located downstream from the pressure source, above the solenoid valve. The sensor operates in a differential mode and responds in real-time to the internal flow-pulse resulting from the brief opening interval of the solenoid valve leading to a rapid ejection of a fluid droplet. The integral of the flow-pulse delivered by the sensor is directly proportional to the volume of the ejected droplet from the nozzle. The quantitative information is utilized to provide active control of the effectively dispensed or aspirated volume by adjusting the solenoid valve accordingly. This process significantly enhances the precision of the fluid delivery. The system furthermore compensates automatically for any changes in the viscosity of the dispensed liquid. The data delivered by the flow sensor can be saved and backtracked in order to confirm and validate the aspiration and dispensing process in its entirety. The collected dispense information can be used for quality control assessments and automatically be made part of an electronic record.

Self-contained filtered density function

DOE PAGES

Nouri, Arash G.; Nik, Mehdi B.; Givi, Pope; ...

2017-09-18

The filtered density function (FDF) closure is extended to a “self-contained” format to include the subgrid-scale (SGS) statistics of all of the hydro-thermo-chemical variables in turbulent flows. These are the thermodynamic pressure, the specific internal energy, the velocity vector, and the composition field. In this format, the model is comprehensive and facilitates large-eddy simulation (LES) of flows at both low and high compressibility levels. A transport equation is developed for the joint pressure-energy-velocity-composition filtered mass density function (PEVC-FMDF). In this equation, the effect of convection appears in closed form. The coupling of the hydrodynamics and thermochemistry is modeled via amore » set of stochastic differential equation for each of the transport variables. This yields a self-contained SGS closure. We demonstrated how LES is conducted of a turbulent shear flow with transport of a passive scalar. Finally, the consistency of the PEVC-FMDF formulation is established, and its overall predictive capability is appraised via comparison with direct numerical simulation (DNS) data.« less

Nonlinear Evolution of Azimuthally Compact Crossflow-Vortex Packet over a Yawed Cone

NASA Astrophysics Data System (ADS)

Choudhari, Meelan; Li, Fei; Paredes, Pedro; Duan, Lian; NASA Langley Research Center Team; Missouri Univ of Sci; Tech Team

2017-11-01

Hypersonic boundary-layer flows over a circular cone at moderate incidence angle can support strong crossflow instability and, therefore, a likely scenario for laminar-turbulent transition in such flows corresponds to rapid amplification of high-frequency secondary instabilities sustained by finite amplitude stationary crossflow vortices. Direct numerical simulations (DNS) are used to investigate the nonlinear evolution of azimuthally compact crossflow vortex packets over a 7-degree half-angle, yawed circular cone in a Mach 6 free stream. Simulation results indicate that the azimuthal distribution of forcing has a strong influence on the stationary crossflow amplitudes; however, the vortex trajectories are nearly the same for both periodic and localized roughness height distributions. The frequency range, mode shapes, and amplification characteristics of strongly amplified secondary instabilities in the DNS are found to overlap with the predictions of secondary instability theory. The DNS computations also provide valuable insights toward the application of planar, partial-differential-equation based eigenvalue analysis to spanwise inhomogeneous, fully three-dimensional, crossflow-dominated flow configurations.

Three-dimensional instabilities of natural convection between two differentially heated vertical plates: Linear and nonlinear complementary approaches

NASA Astrophysics Data System (ADS)

Gao, Zhenlan; Podvin, Berengere; Sergent, Anne; Xin, Shihe; Chergui, Jalel

2018-05-01

The transition to the chaos of the air flow between two vertical plates maintained at different temperatures is studied in the Boussinesq approximation. After the first bifurcation at critical Rayleigh number Rac, the flow consists of two-dimensional (2D) corotating rolls. The stability of the 2D rolls is examined, confronting linear predictions with nonlinear integration. In all cases the 2D rolls are destabilized in the spanwise direction. Efficient linear stability analysis based on an Arnoldi method shows competition between two eigenmodes, corresponding to different spanwise wavelengths and different types of roll distortion. Nonlinear integration shows that the lower-wave-number mode is always dominant. A partial route to chaos is established through the nonlinear simulations. The flow becomes temporally chaotic for Ra =1.05 Rac , but remains characterized by the spatial patterns identified by linear stability analysis. This highlights the complementary role of linear stability analysis and nonlinear simulation.

The solution of three-variable duct-flow equations

NASA Technical Reports Server (NTRS)

Stuart, A. R.; Hetherington, R.

1974-01-01

This paper establishes a numerical method for the solution of three-variable problems and is applied here to rotational flows through ducts of various cross sections. An iterative scheme is developed, the main feature of which is the addition of a duplicate variable to the forward component of velocity. Two forward components of velocity result from integrating two sets of first order ordinary differential equations for the streamline curvatures, in intersecting directions across the duct. Two pseudo-continuity equations are introduced with source/sink terms, whose strengths are dependent on the difference between the forward components of velocity. When convergence is obtained, the two forward components of velocity are identical, the source/sink terms are zero, and the original equations are satisfied. A computer program solves the exact equations and boundary conditions numerically. The method is economical and compares successfully with experiments on bent ducts of circular and rectangular cross section where secondary flows are caused by gradients of total pressure upstream.

Computation of three-dimensional nozzle-exhaust flow fields with the GIM code

NASA Technical Reports Server (NTRS)

Spradley, L. W.; Anderson, P. G.

1978-01-01

A methodology is introduced for constructing numerical analogs of the partial differential equations of continuum mechanics. A general formulation is provided which permits classical finite element and many of the finite difference methods to be derived directly. The approach, termed the General Interpolants Method (GIM), can combined the best features of finite element and finite difference methods. A quasi-variational procedure is used to formulate the element equations, to introduce boundary conditions into the method and to provide a natural assembly sequence. A derivation is given in terms of general interpolation functions from this procedure. Example computations for transonic and supersonic flows in two and three dimensions are given to illustrate the utility of GIM. A three-dimensional nozzle-exhaust flow field is solved including interaction with the freestream and a coupled treatment of the shear layer. Potential applications of the GIM code to a variety of computational fluid dynamics problems is then discussed in terms of existing capability or by extension of the methodology.

Genetic characterization of Common Eiders breeding in the Yukon-Kuskokwim Delta, Alaska

USGS Publications Warehouse

Sonsthagen, Sarah A.; Talbot, Sandra L.; McCracken, Kevin G.

2007-01-01

We assessed population genetic subdivision among four colonies of Common Eiders (Somateria mollissima v-nigrum) breeding in the Yukon-Kuskokwim Delta (YKD), Alaska, using microsatellite genotypes and DNA sequences with differing modes of inheritance. Significant, albeit low, levels of genetic differentiation were observed between mainland populations and Kigigak Island for nuclear intron lamin A and mitochondrial DNA (mtDNA) control region. Intercolony variation in haplotypic frequencies also was observed at mtDNA. Positive growth signatures assayed from microsatellites, nuclear introns, and mtDNA indicate recent colonization of the YKD, and may explain the low levels of structuring observed. Gene flow estimates based on microsatellites, nuclear introns, and mtDNA suggest asymmetrical gene flow between mainland colonies and Kigigak Island, with more individuals on average dispersing from mainland populations to Kigigak Island than vice versa. The directionality of gene flow observed may be explained by the colonization of the YKD from northern glacial refugia or by YKD metapopulation dynamics.

Self-contained filtered density function

DOE Office of Scientific and Technical Information (OSTI.GOV)

Nouri, Arash G.; Nik, Mehdi B.; Givi, Pope

The filtered density function (FDF) closure is extended to a “self-contained” format to include the subgrid-scale (SGS) statistics of all of the hydro-thermo-chemical variables in turbulent flows. These are the thermodynamic pressure, the specific internal energy, the velocity vector, and the composition field. In this format, the model is comprehensive and facilitates large-eddy simulation (LES) of flows at both low and high compressibility levels. A transport equation is developed for the joint pressure-energy-velocity-composition filtered mass density function (PEVC-FMDF). In this equation, the effect of convection appears in closed form. The coupling of the hydrodynamics and thermochemistry is modeled via amore » set of stochastic differential equation for each of the transport variables. This yields a self-contained SGS closure. We demonstrated how LES is conducted of a turbulent shear flow with transport of a passive scalar. Finally, the consistency of the PEVC-FMDF formulation is established, and its overall predictive capability is appraised via comparison with direct numerical simulation (DNS) data.« less

Self-contained filtered density function

NASA Astrophysics Data System (ADS)

Nouri, A. G.; Nik, M. B.; Givi, P.; Livescu, D.; Pope, S. B.

2017-09-01

The filtered density function (FDF) closure is extended to a "self-contained" format to include the subgrid-scale (SGS) statistics of all of the hydro-thermo-chemical variables in turbulent flows. These are the thermodynamic pressure, the specific internal energy, the velocity vector, and the composition field. In this format, the model is comprehensive and facilitates large-eddy simulation (LES) of flows at both low and high compressibility levels. A transport equation is developed for the joint pressure-energy-velocity-composition filtered mass density function (PEVC-FMDF). In this equation, the effect of convection appears in closed form. The coupling of the hydrodynamics and thermochemistry is modeled via a set of stochastic differential equation for each of the transport variables. This yields a self-contained SGS closure. For demonstration, LES is conducted of a turbulent shear flow with transport of a passive scalar. The consistency of the PEVC-FMDF formulation is established, and its overall predictive capability is appraised via comparison with direct numerical simulation (DNS) data.

Unsteady three-dimensional marginal separation caused by surface-mounted obstacles and/or local suction

NASA Astrophysics Data System (ADS)

Braun, Stefan; Kluwick, Alfred

2004-09-01

Earlier investigations of steady two-dimensional marginally separated laminar boundary layers have shown that the non-dimensional wall shear (or equivalently the negative non-dimensional perturbation displacement thickness) is governed by a nonlinear integro-differential equation. This equation contains a single controlling parameter Gamma characterizing, for example, the angle of attack of a slender airfoil and has the important property that (real) solutions exist up to a critical value Gamma_c of Gamma only. Here we investigate three-dimensional unsteady perturbations of an incompressible steady two-dimensional marginally separated laminar boundary layer with special emphasis on the flow behaviour near Gamma_c. Specifically, it is shown that the integro differential equation which governs these disturbances if Gamma_c {-} Gamma {=} O(1) reduces to a nonlinear partial differential equation known as the Fisher equation as Gamma approaches the critical value Gamma_c. This in turn leads to a significant simplification of the problem allowing, among other things, a systematic study of devices used in boundary-layer control and an analytical investigation of the conditions leading to the formation of finite-time singularities which have been observed in earlier numerical studies of unsteady two-dimensional and three-dimensional flows in the vicinity of a line of symmetry. Also, it is found that it is possible to construct exact solutions which describe waves of constant form travelling in the spanwise direction. These waves may contain singularities which can be interpreted as vortex sheets. The existence of these solutions strongly suggests that solutions of the Fisher equation which lead to finite-time blow-up may be extended beyond the blow-up time, thereby generating moving singularities which can be interpreted as vortical structures qualitatively similar to those emerging in direct numerical simulations of near critical (i.e. transitional) laminar separation bubbles. This is supported by asymptotic analysis.

Dynamic interaction of two-phase debris flow with pyramidal defense structures: An optimal strategy to efficiently protecting the desired area

NASA Astrophysics Data System (ADS)

Kattel, Parameshwari; Kafle, Jeevan; Fischer, Jan-Thomas; Mergili, Martin; Tuladhar, Bhadra Man; Pudasaini, Shiva P.

2017-04-01

In this work we analyze the dynamic interaction of two phase debris flows with pyramidal obstacles. To simulate the dynamic interaction of two-phase debris flow (a mixture of solid particles and viscous fluid) with obstacles of different dimensions and orientations, we employ the general two-phase mass flow model (Pudasaini, 2012). The model consists of highly non-linear partial differential equations representing the mass and momentum conservations for both solid and fluid. Besides buoyancy, the model includes some dominant physical aspects of the debris flows such as generalized drag, virtual mass and non-Newtonian viscous stress as induced by the gradient of solid-volume-fraction. Simulations are performed with high-resolution numerical schemes to capture essential dynamics, including the strongly re-directed flow with multiple stream lines, mass arrest and debris-vacuum generation when the rapidly cascading debris mass suddenly encounters the obstacle. The solid and fluid phases show fundamentally different interactions with obstacles, flow spreading and dispersions, run-out dynamics, and deposition morphology. A forward-facing pyramid deflects the mass wider, and a rearward-facing pyramid arrests a portion of solid-mass at its front. Our basic study reveals that appropriately installed obstacles, their dimensions and orientations have a significant influence on the flow dynamics, material redistribution and redirection. The precise knowledge of the change in dynamics is of great importance for the optimal and effective protection of designated areas along the mountain slopes and the runout zones. Further important results are, that specific installations lead to redirect either solid, or fluid, or both, in the desired amounts and directions. The present method of the complex interactions of real two-phase mass flows with the obstacles may help us to construct defense structures and to design advanced and physics-based engineering solutions for the prevention and mitigation of natural hazards caused by geophysical mass flows. References: Pudasaini, S. P. (2012): A general two-phase debris flow model. J. Geophys. Res. 117, F03010, doi: 10.1029/ 2011JF002186.

Multi-phase imaging of intermittency at steady state using differential imaging method by X-ray micro-tomography

NASA Astrophysics Data System (ADS)

Gao, Y.; Lin, Q.; Bijeljic, B.; Blunt, M. J.

2017-12-01

To observe intermittency in consolidated rock, we image a steady state flow of brine and decane in Bentheimer sandstone. We devise an experimental method based on X-ray differential imaging method to examine how changes in flow rate impact the pore-scale distribution of fluids during co-injection flow under dynamic flow conditions at steady state. This helps us elucidate the diverse flow regimes (connected, intermittent break-up, or continual break-up of the non-wetting phase pathways) for two capillary numbers. Also, relative permeability curves under both capillary and viscous limited conditions could be measured. We have performed imbibition sample floods using oil-brine and measured steady state relative permeability on a sandstone rock core in order to fully characterize the flow behaviour at low and high Ca. Two sets of experiments at high and low flow rates are provided to explore the time-evolution of the non-wetting phase clusters distribution under different flow conditions. The high flow rate is 0.5 mL/min, whose corresponding capillary number is 7.7×10-6. The low flow rate is 0.02 mL/min, whose capillary number is 3.1×10-7. A procedure based on using high-salinity brine as the contrast phase and applying differential imaging between the dry scan and that of the sample saturation with a 30 wt% Potassium iodide (KI) doped brine help to make sure there is no non-wetting phase in micro-pores. Then the intermittent phase in multiphase flow image at high Ca can be quantified by obtaining the differential image between the 30 wt% KI brine image and the scans that taken at each fixed fractional flow. By using the grey scale histogram distribution of the raw images at each condition, the oil proportion in the intermittent phase can be calculated. The pressure drops at each fractional flow at low and high Ca can be measured by high-precision pressure differential sensors and utilized to calculate to the relative permeability at pore scale. The relative permeability data and fw-Sw relationship obtained by our experiment at pore scale are compared with the data collected from experiments which were conducted at core scale, and they match well.

Numerical simulation of hydrogen-air reacting flows in rectangular channels with catalytic surface reactions

NASA Astrophysics Data System (ADS)

Amano, Ryoichi S.; Abou-Ellail, Mohsen M.; Elhaw, Samer; Saeed Ibrahim, Mohamed

2013-09-01

In this work a prediction was numerically modeled for a catalytically stabilized thermal combustion of a lean homogeneous mixture of air and hydrogen. The mixture flows in a narrow rectangular channel lined with a thin coating of platinum catalyst. The solution using an in-house code is based on the steady state partial differential continuity, momentum and energy conservation equations for the mixture and species involved in the reactions. A marching technique is used along the streamwise direction to solve the 2-D plane-symmetric laminar flow of the gas. Two chemical kinetic reaction mechanisms were included; one for the gas phase reactions consisting of 17 elementary reactions; of which 7 are forward-backward reactions while the other mechanism is for the surface reactions—which are the prime mover of the combustion under a lean mixture condition—consisting of 16 elementary reactions. The results were compared with a former congruent experimental work where temperature was measured using thermocouples, while using PLIF laser for measuring water and hydrogen mole fractions. The comparison showed good agreement. More results for the velocities, mole fractions of other species were carried out across the transverse and along the streamwise directions providing a complete picture of overall mechanism—gas and surface—and on the production, consumptions and travel of the different species. The variations of the average OH mole fraction with the streamwise direction showed a sudden increase in the region where the ignition occurred. Also the rate of reactions of the entire surface species were calculated along the streamwise direction and a surface water production flux equation was derived by calculating the law of mass action's constants from the concentrations of hydrogen, oxygen and the rate of formation of water near the surface.

Population connectivity and larval dispersal of the exploited mangrove crab Ucides cordatus along the Brazilian coast.

PubMed

Britto, Fábio B; Schmidt, Anders J; Carvalho, Adriana M F; Vasconcelos, Carolina C M P; Farias, Antonia M; Bentzen, Paul; Diniz, Fábio M

2018-01-01

The mangrove crab Ucides cordatus is considered a key species for the ecological balance of mangrove forests and a major source of employment and income for traditional crab collectors in Brazil. Several studies evidenced weak genetic variation among populations due to an efficient larval transport. However, gene flow patterns of the species is poorly understood, with no information about migration rates. The influence of the two main Brazilian currents in larval dispersion is also not clear. In order to provide baseline information for conservation, planning and management of this important fishery resource, the present study aimed to estimate and evaluate spatial distribution of genetic diversity, migration rates and gene flow directivity among populations of U. cordatus in Brazil. Nine microsatellites were used to resolve population structure of 319 crabs collected from six sites located along the Brazilian coast. The degree of geographical differentiation included estimates of genetic diversity, population structure and gene flow models, with spatial analysis of shared alleles (SAShA), isolation by distance tests, AMOVA, discriminant analysis of principal components (DAPC) and Bayesian clustering. We estimated the amount of ongoing gene flow between clusters using the coalescent-based method implemented in Migrate-N. Loci were highly polymorphic (average of 12.4 alleles per locus) evidencing high genetic variability. There was significant differentiation among localities, despite of the low value of F ST (= 0.019; P < 0.001). F ST and Jost's D indexes were also estimated in pairwise comparisons and showed significant differences between most of the surveyed site pairs ( P < 0.05). Structure evidenced a single genetic group among samples, however SAShA pointed to a non-panmictic condition ( P = 0.011). AMOVA detected four statistical significant clusters with low level of differentiation ( F CT = 0.037; P = 0.023). The gene flow model that best described the population connectivity was the island model, with ∼24 crabs being exchanged among localities per generation. The high migration rates found among localities seem to be the main force acting to sustain the distribution of the genetic diversity of U. cordatus . Despite the high gene flow and the weak population structure among samples, the significant genetic differences found suggest that gene flow alone does not bypass the effects of genetic drift, natural selection and/or human exploitation. These findings are vital for the establishment of a database to be used in the development of conservation programs.

Population connectivity and larval dispersal of the exploited mangrove crab Ucides cordatus along the Brazilian coast

PubMed Central

Schmidt, Anders J.; Carvalho, Adriana M.F.; Vasconcelos, Carolina C.M.P.; Farias, Antonia M.; Bentzen, Paul

2018-01-01

Background The mangrove crab Ucides cordatus is considered a key species for the ecological balance of mangrove forests and a major source of employment and income for traditional crab collectors in Brazil. Several studies evidenced weak genetic variation among populations due to an efficient larval transport. However, gene flow patterns of the species is poorly understood, with no information about migration rates. The influence of the two main Brazilian currents in larval dispersion is also not clear. In order to provide baseline information for conservation, planning and management of this important fishery resource, the present study aimed to estimate and evaluate spatial distribution of genetic diversity, migration rates and gene flow directivity among populations of U. cordatus in Brazil. Methods Nine microsatellites were used to resolve population structure of 319 crabs collected from six sites located along the Brazilian coast. The degree of geographical differentiation included estimates of genetic diversity, population structure and gene flow models, with spatial analysis of shared alleles (SAShA), isolation by distance tests, AMOVA, discriminant analysis of principal components (DAPC) and Bayesian clustering. We estimated the amount of ongoing gene flow between clusters using the coalescent-based method implemented in Migrate-N. Results Loci were highly polymorphic (average of 12.4 alleles per locus) evidencing high genetic variability. There was significant differentiation among localities, despite of the low value of FST (= 0.019; P < 0.001). FST and Jost’s D indexes were also estimated in pairwise comparisons and showed significant differences between most of the surveyed site pairs (P < 0.05). Structure evidenced a single genetic group among samples, however SAShA pointed to a non-panmictic condition (P = 0.011). AMOVA detected four statistical significant clusters with low level of differentiation (FCT = 0.037; P = 0.023). The gene flow model that best described the population connectivity was the island model, with ∼24 crabs being exchanged among localities per generation. Discussion The high migration rates found among localities seem to be the main force acting to sustain the distribution of the genetic diversity of U. cordatus. Despite the high gene flow and the weak population structure among samples, the significant genetic differences found suggest that gene flow alone does not bypass the effects of genetic drift, natural selection and/or human exploitation. These findings are vital for the establishment of a database to be used in the development of conservation programs. PMID:29736340

Self-Contained Compressed-Flow Generation Device for Use in Making Differential Measurements

NASA Technical Reports Server (NTRS)

England, John Dwight (Inventor); Kelley, Anthony R. (Inventor); Cronise, Raymond J. (Inventor)

2014-01-01

A device used in making differential measurements of a flow includes a flow obstruction and a support arm. The flow obstruction's forward portion is a nose cone. The flow obstruction's aft portion is coupled to the nose cone. The support arm's first end is coupled to an exterior wall of a conduit, and its second end is coupled to the forward portion of the flow obstruction. The support arm positions the flow obstruction in the conduit such that a flow region is defined around its nose cone, and such that the support arm's first and second end are separated from one another with respect to a length dimension of the conduit. Measurement ports are provided in the support arm and flow obstruction. Manifolds extending through the flow obstruction and support arm couple the ports to points at the exterior wall of the conduit.

Sensory trait variation in an echolocating bat suggests roles for both selection and plasticity.

PubMed

Odendaal, Lizelle J; Jacobs, David S; Bishop, Jacqueline M

2014-03-27

Across heterogeneous environments selection and gene flow interact to influence the rate and extent of adaptive trait evolution. This complex relationship is further influenced by the rarely considered role of phenotypic plasticity in the evolution of adaptive population variation. Plasticity can be adaptive if it promotes colonization and survival in novel environments and in doing so may increase the potential for future population differentiation via selection. Gene flow between selectively divergent environments may favour the evolution of phenotypic plasticity or conversely, plasticity itself may promote gene flow, leading to a pattern of trait differentiation in the presence of gene flow. Variation in sensory traits is particularly informative in testing the role of environment in trait and population differentiation. Here we test the hypothesis of 'adaptive differentiation with minimal gene flow' in resting echolocation frequencies (RF) of Cape horseshoe bats (Rhinolophus capensis) across a gradient of increasingly cluttered habitats. Our analysis reveals a geographically structured pattern of increasing RF from open to highly cluttered habitats in R. capensis; however genetic drift appears to be a minor player in the processes influencing this pattern. Although Bayesian analysis of population structure uncovered a number of spatially defined mitochondrial groups and coalescent methods revealed regional-scale gene flow, phylogenetic analysis of mitochondrial sequences did not correlate with RF differentiation. Instead, habitat discontinuities between biomes, and not genetic and geographic distances, best explained echolocation variation in this species. We argue that both selection for increased detection distance in relatively less cluttered habitats and adaptive phenotypic plasticity may have influenced the evolution of matched echolocation frequencies and habitats across different populations. Our study reveals significant sensory trait differentiation in the presence of historical gene flow and suggests roles for both selection and plasticity in the evolution of echolocation variation in R. capensis. These results highlight the importance of population level analyses to i) illuminate the subtle interplay between selection, plasticity and gene flow in the evolution of adaptive traits and ii) demonstrate that evolutionary processes may act simultaneously and that their relative influence may vary across different environments.

Accuracy improvement of the ice flow rate measurements on Antarctic ice sheet by DInSAR method

NASA Astrophysics Data System (ADS)

Shiramizu, Kaoru; Doi, Koichiro; Aoyama, Yuichi

2015-04-01

DInSAR (Differential Interferometric Synthetic Aperture Radar) is an effective tool to measure the flow rate of slow flowing ice streams on Antarctic ice sheet with high resolution. In the flow rate measurement by DInSAR method, we use Digital Elevation Model (DEM) at two times in the estimating process. At first, we use it to remove topographic fringes from InSAR images. And then, it is used to project obtained displacements along Line-Of-Sight (LOS) direction to the actual flow direction. ASTER-GDEM widely-used for InSAR prosessing of the data of polar region has a lot of errors especially in the inland ice sheet area. Thus the errors yield irregular flow rates and directions. Therefore, quality of DEM has a substantial influence on the ice flow rate measurement. In this study, we created a new DEM (resolution 10m; hereinafter referred to as PRISM-DEM) based on ALOS/PRISM images, and compared PRISM-DEM and ASTER-GDEM. The study area is around Skallen, 90km south from Syowa Station, in the southern part of Sôya Coast, East Antarctica. For making DInSAR images, we used ALOS/PALSAR data of 13 pairs (Path633, Row 571-572), observed during the period from November 23, 2007 through January 16, 2011. PRISM-DEM covering the PALSAR scene was created from nadir and backward view images of ALOS/PRISM (Observation date: 2009/1/18) by applying stereo processing with a digital mapping equipment, and then the automatically created a primary DEM was corrected manually to make a final DEM. The number of irregular values of actual ice flow rate was reduced by applying PRISM-DEM compared with that by applying ASTER-GDEM. Additionally, an averaged displacement of approximately 0.5cm was obtained by applying PRISM-DEM over outcrop area, where no crustal displacement considered to occur during the recurrence period of ALOS/PALSAR (46days), while an averaged displacement of approximately 1.65 cm was observed by applying ASTER-GDEM. Since displacements over outcrop area are considered to be apparent ones, the average could be a measure of flow rate estimation accuracy by DInSAR. Therefore, it is concluded that the accuracy of the ice flow rate measurement can be improved by using PRISM-DEM. In this presentation, we will show the results of the estimated flow rate of ice streams in the region of interest, and discuss the additional accuracy improvement of this method.

Soluble human leukocyte antigen G5 polarizes differentiation of macrophages toward a decidual macrophage-like phenotype.

PubMed

Lee, Cheuk-Lun; Guo, YiFan; So, Kam-Hei; Vijayan, Madhavi; Guo, Yue; Wong, Vera H H; Yao, YuanQing; Lee, Kai-Fai; Chiu, Philip C N; Yeung, William S B

2015-10-01

What are the actions of soluble human leukocyte antigen G5 (sHLAG5) on macrophage differentiation? sHLAG5 polarizes the differentiation of macrophages toward a decidual macrophage-like phenotype, which could regulate fetomaternal tolerance and placental development. sHLAG5 is a full-length soluble isoform of human leukocyte antigen implicated in immune tolerance during pregnancy. Low or undetectable circulating level of sHLAG5 in first trimester of pregnancy is associated with pregnancy complications such as pre-eclampsia and spontaneous abortion. Decidual macrophages are located in close proximity to invasive trophoblasts, and are involved in regulating fetomaternal tolerance and placental development. Human peripheral blood monocytes were differentiated into macrophages by treatment with granulocyte macrophage colony-stimulating factor in the presence or absence of recombinant sHLAG5 during the differentiation process. The phenotypes and the biological activities of the resulting macrophages were compared. Recombinant sHLAG5 was produced in Escherichia coli BL21 and the protein identity was verified by tandem mass spectrometry. The expression of macrophage markers were analyzed by flow cytometry and quantitative PCR. Phagocytosis was determined by flow cytometry. Indoleamine 2,3-dioxygenase 1 expression and activity were measured by western blot analysis and kynurenine assay, respectively. Cell proliferation and cell cycling were determined by fluorometric cell proliferation assay and flow cytometry, respectively. Cytokine secretion was determined by cytokine array and ELISA kits. Intracellular cytokine expression was measured by flow cytometry. Cell invasion and migration were determined by trans-well invasion and migration assay, respectively. sHLAG5 drove the differentiation of macrophages with 'immuno-modulatory' characteristics, including reduced expression of M1 macrophage marker CD86 and increased expression of M2 macrophage marker CD163. sHLAG5-polarized macrophages showed enhanced phagocytic activity. They also had higher expression and activity of indoleamine 2,3-dioxygenase 1, a phenotypic marker of decidual macrophages, which inhibited proliferation of autologous T-cells via induction of G0/G1 cell cycle arrest. In addition, sHLAG5-polarized macrophages had an increased secretion of interleukin-6 and C-X-C motif ligand 1, which inhibited interferon-γ production in T-cells and induction of trophoblast invasion, respectively. Most information on the phenotypes and biological activities of human decidual macrophages are based on past literatures. A direct comparison between sHLAG5-polarized macrophages and primary decidual macrophages is required to verify the present observations. This is the first study on the role of sHLAG5 in macrophage differentiation. Further study on the mechanism that regulates the differentiation process of macrophages would enhance our understanding on the physiology of early pregnancy. This work was supported in part by the Hong Kong Research Grant Council Grant HKU774212 and the University of Hong Kong Grant 201309176126. The authors have no competing interests to declare. Nil. © The Author 2015. Published by Oxford University Press on behalf of the European Society of Human Reproduction and Embryology. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

High accuracy differential pressure measurements using fluid-filled catheters - A feasibility study in compliant tubes.

PubMed

Rotman, Oren Moshe; Weiss, Dar; Zaretsky, Uri; Shitzer, Avraham; Einav, Shmuel

2015-09-18

High accuracy differential pressure measurements are required in various biomedical and medical applications, such as in fluid-dynamic test systems, or in the cath-lab. Differential pressure measurements using fluid-filled catheters are relatively inexpensive, yet may be subjected to common mode pressure errors (CMP), which can significantly reduce the measurement accuracy. Recently, a novel correction method for high accuracy differential pressure measurements was presented, and was shown to effectively remove CMP distortions from measurements acquired in rigid tubes. The purpose of the present study was to test the feasibility of this correction method inside compliant tubes, which effectively simulate arteries. Two tubes with varying compliance were tested under dynamic flow and pressure conditions to cover the physiological range of radial distensibility in coronary arteries. A third, compliant model, with a 70% stenosis severity was additionally tested. Differential pressure measurements were acquired over a 3 cm tube length using a fluid-filled double-lumen catheter, and were corrected using the proposed CMP correction method. Validation of the corrected differential pressure signals was performed by comparison to differential pressure recordings taken via a direct connection to the compliant tubes, and by comparison to predicted differential pressure readings of matching fluid-structure interaction (FSI) computational simulations. The results show excellent agreement between the experimentally acquired and computationally determined differential pressure signals. This validates the application of the CMP correction method in compliant tubes of the physiological range for up to intermediate size stenosis severity of 70%. Copyright © 2015 Elsevier Ltd. All rights reserved.

Fluid flow increases mineralized matrix deposition in 3D perfusion culture of marrow stromal osteoblasts in a dose-dependent manner

NASA Technical Reports Server (NTRS)

Bancroft, Gregory N.; Sikavitsas, Vassilios I.; van den Dolder, Juliette; Sheffield, Tiffany L.; Ambrose, Catherine G.; Jansen, John A.; Mikos, Antonios G.; McIntire, L. V. (Principal Investigator)

2002-01-01

Bone is a complex highly structured mechanically active 3D tissue composed of cellular and matrix elements. The true biological environment of a bone cell is thus derived from a dynamic interaction between responsively active cells experiencing mechanical forces and a continuously changing 3D matrix architecture. To investigate this phenomenon in vitro, marrow stromal osteoblasts were cultured on 3D scaffolds under flow perfusion with different rates of flow for an extended period to permit osteoblast differentiation and significant matrix production and mineralization. With all flow conditions, mineralized matrix production was dramatically increased over statically cultured constructs with the total calcium content of the cultured scaffolds increasing with increasing flow rate. Flow perfusion induced de novo tissue modeling with the formation of pore-like structures in the scaffolds and enhanced the distribution of cells and matrix throughout the scaffolds. These results represent reporting of the long-term effects of fluid flow on primary differentiating osteoblasts and indicate that fluid flow has far-reaching effects on osteoblast differentiation and phenotypic expression in vitro. Flow perfusion culture permits the generation and study of a 3D, actively modeled, mineralized matrix and can therefore be a valuable tool for both bone biology and tissue engineering.

Differential and directional effects of perfusion on electrical and thermal conductivities in liver.

PubMed

Podhajsky, Ronald J; Yi, Ming; Mahajan, Roop L

2009-01-01

Two different measurement probes--an electrical probe and a thermal conductivity probe--were designed, fabricated, calibrated, and used in experimental studies on a pig liver model that was designed to control perfusion rates. These probes were fabricated by photolithography and mounted in 1.5-mm diameter catheters. We measured the local impedance and thermal conductivity, respectively, of the artificially perfused liver at different flow rates and, by rotating the probes, in different directions. The results show that both the local electrical conductivity and the thermal conductivity varied location to location, that thermal conductivity increased with decreased distance to large blood vessels, and that significant directional differences exist in both electrical and thermal conductivities. Measurements at different perfusion rates demonstrated that both the local electrical and local thermal conductivities increased linearly with the square root of perfusion rate. These correlations may be of great value to many energy-based biomedical applications.

Dynamic characteristics of a two-stage variable-mass flexible missile with internal flow

NASA Technical Reports Server (NTRS)

Meirovitch, L.; Bankovskis, J.

1972-01-01

A general formulation of the dynamical problems associated with powered flight of a two stage flexible, variable-mass missile with internal flow, discrete masses, and aerodynamic forces is presented. The formulation comprises six ordinary differential equations for the rigid body motion, 3n ordinary differential equations for the n discrete masses and three partial differential equations with the appropriate boundary conditions for the elastic motion. This set of equations is modified to represent a single stage flexible, variable-mass missile with internal flow and aerodynamic forces. The rigid-body motion consists then of three translations and three rotations, whereas the elastic motion is defined by one longitudinal and two flexural displacements, the latter about two orthogonal transverse axes. The differential equations are nonlinear and, in addition, they possess time-dependent coefficients due to the mass variation.

Measurement of the differential pressure of liquid metals

DOEpatents

Metz, H.J.

1975-09-01

This patent relates to an improved means for measuring the differential pressure between any two points in a process liquid metal coolant loop, wherein the flow of liquid metal in a pipe is opposed by a permanent magnet liquid metal pump until there is almost zero flow shown by a magnetic type flowmeter. The pressure producing the liquid metal flow is inferred from the rate of rotation of the permanent magnet pump. In an alternate embodiment, a differential pressure transducer is coupled to a process pipeline by means of high-temperature bellows or diaphragm seals, and a permanent magnet liquid metal pump in the high-pressure transmission line to the pressure transducer can be utilized either for calibration of the transducer or for determining the process differential pressure as a function of the magnet pump speed. (auth)

Regional genetic differentiation in the blue mussel from the Baltic Sea area

NASA Astrophysics Data System (ADS)

Larsson, J.; Lind, E. E.; Corell, H.; Grahn, M.; Smolarz, K.; Lönn, M.

2017-08-01

Connectivity plays an important role in shaping the genetic structure and in evolution of local adaptation. In the marine environment barriers to gene flow are in most cases caused by gradients in environmental factors, ocean circulation and/or larval behavior. Despite the long pelagic larval stages, with high potential for dispersal many marine organisms have been shown to have a fine scale genetic structuring. In this study, by using a combination of high-resolution genetic markers, species hybridization data and biophysical modeling we can present a comprehensive picture of the evolutionary landscape for a keystone species in the Baltic Sea, the blue mussel. We identified distinct genetic differentiation between the West Coast, Baltic Proper and Bothnian Sea regions, with lower gene diversity in the Bothnian Sea. Oceanographic connectivity together with salinity and to some extent species identity provides explanations for the genetic differentiation between the West Coast and the Baltic Sea (Baltic Proper and Bothnian Sea). The genetic differentiation between the Baltic Proper and Bothnian Sea cannot be directly explained by oceanographic connectivity, species identity or salinity, while the lower connectivity to the Bothnian Sea may explain the lower gene diversity.

Stability of the electroosmotic flow of a two-layer electrolyte-dielectric system with external pressure gradient⋆.

PubMed

Gorbacheva, E V; Ganchenko, G S; Demekhin, E A

2018-03-27

The stability of the electroosmotic flow of electrolyte-dielectric viscous liquids under the influence of the DC and AC electric fields along with the external pressure gradient is studied theoretically. Liquids are bounded by two infinite parallel plates. The lower wall bordering the electrolyte is assumed to be a charged surface, and the upper wall is electrically isolated. The charge at the lower boundary is assumed to be immobile, while the surface charge at the free surface is assumed to be mobile. In this paper, we study the micro- and nanosized liquid layers. The mathematical model is described by a nonlinear system of the Nernst-Planck-Poisson-Stokes partial differential equations with the appropriate boundary conditions on the solid surface, the electrolyte/dielectric interface, and on the upper wall. The pressure gradient is highly important for the stability of the flow. For the DC case, the external pressure could either stabilize and destabilize the flow depending on the relative directions of the electroosmotic flow and the pressure-driven flow. For the AC case, the dependence on the value of the external pressure is not monotonous for different wave numbers of perturbations, but, as a rule, the external pressure destabilizes the flow. As the frequency of the electric field increases, the one-dimensional solution of the problem becomes stable.

In vitro induction effect of 1,25(OH)2D3 on differentiation of hair follicle stem cell into keratinocyte.

PubMed

Joulai Veijouyeh, Sanaz; Mashayekhi, Farhad; Yari, Abazar; Heidari, Fatemeh; Sajedi, Nayereh; Moghani Ghoroghi, Fatemeh; Nobakht, Maliheh

2017-02-01

Stem cells are characterized by self-renewal and differentiation capabilities. The bulge hair follicle stem cells (HFSCs) are able to convert to epithelial components. The active metabolite of vitamin D, 1,25(OH) 2 D 3 , plays important roles in this differentiation process. In the present study has found that 1,25(OH) 2 D 3 induces the HFSCs differentiation into keratinocyte. HFSCs are isolated from rat whiskers and cultivated in DMEM medium. To isolate bulge stem cell population, flow cytometry and immunocytochemistry using K15, CD34 and nestin biomarkers were performed. In order to accelerate the HFSCs differentiation into eratinocyte, HFSCs were treated with 10 -12 M, 1,25(OH) 2 D 3 every 48 h for a week. Immunocytochemistry results showed that bulge stem cells are nestin and CD34 positive but K15 negative before differentiation. Subsequently flow cytometry results, showed that the expression of nestin, CD34 and K15 were 70.96%, 93.03% and 6.88% respectively. After differentiation, the immunocytochemical and flow cytometry results indicated that differentiated cells have positive reaction to K15 with 68.94% expression level. It was concluded that 10 -12 M, 1,25(OH) 2 D 3 could induce the HFSCs differentiation into keratinocytes. Copyright © 2017 Chang Gung University. Published by Elsevier B.V. All rights reserved.

A common neural network differentially mediates direct and social fear learning.

PubMed

Lindström, Björn; Haaker, Jan; Olsson, Andreas

2018-02-15

Across species, fears often spread between individuals through social learning. Yet, little is known about the neural and computational mechanisms underlying social learning. Addressing this question, we compared social and direct (Pavlovian) fear learning showing that they showed indistinguishable behavioral effects, and involved the same cross-modal (self/other) aversive learning network, centered on the amygdala, the anterior insula (AI), and the anterior cingulate cortex (ACC). Crucially, the information flow within this network differed between social and direct fear learning. Dynamic causal modeling combined with reinforcement learning modeling revealed that the amygdala and AI provided input to this network during direct and social learning, respectively. Furthermore, the AI gated learning signals based on surprise (associability), which were conveyed to the ACC, in both learning modalities. Our findings provide insights into the mechanisms underlying social fear learning, with implications for understanding common psychological dysfunctions, such as phobias and other anxiety disorders. Copyright © 2017 Elsevier Inc. All rights reserved.

Magnetic shear-flow instability in thin accretion discs

NASA Astrophysics Data System (ADS)

Rüdiger, G.; Primavera, L.; Arlt, R.; Elstner, D.

1999-07-01

The possibility that the magnetic shear-flow instability (also known as the `Balbus-Hawley' instability) might give rise to turbulence in a thin accretion disc is investigated through numerical simulations. The study is linear and the fluid disc is supposed to be incompressible and differentially rotating with a simple velocity profile with Omega~R^-q. The simplicity of the model is counterbalanced by the fact that the study is fully global in all three spatial directions with boundaries on each side; finite diffusivities are also allowed. The investigation is also carried out for several values of the azimuthal wavenumber of the perturbations in order to analyse whether non-axisymmetric modes might be preferred, which may produce, in a non-linear extension of the study, a self-sustained magnetic field. We find the final pattern steady, with similar kinetic and magnetic energies and the angular momentum always transported outwards. Despite the differential rotation, there are only small differences for the eigenvalues for various non-axisymmetric eigensolutions. Axisymmetric instabilities are by no means preferred; in fact for Prandtl numbers between 0.1 and 1, the azimuthal wavenumbers m=0,1,2(10^16gs^-1). All three quantities appear to be equally readily excited. The equatorial symmetry is quadrupolar for the magnetic field and dipolar for the flow field system. The maximal magnetic field strength required to cause the instability is almost independent of the magnetic Prandtl number. With typical white dwarf values, a magnetic amplitude of 10^5G is estimated.

Population Genetic Structure of a Widespread Bat-Pollinated Columnar Cactus

PubMed Central

Bustamante, Enriquena; Búrquez, Alberto; Scheinvar, Enrique; Eguiarte, Luis Enrique

2016-01-01

Bats are the main pollinators and seed dispersers of Stenocereus thurberi, a xenogamous columnar cactus of northwestern Mexico and a good model to illustrate spatial dynamics of gene flow in long-lived species. Previous studies in this cactus showed differences among populations in the type and abundance of pollinators, and in the timing of flowering and fruiting. In this study we analyzed genetic variability and population differentiation among populations. We used three primers of ISSR to analyze within and among populations genetic variation from eight widely separated populations of S. thurberi in Sonora, Mexico. Sixty-six out of 99 of the ISSR bands (P = 66.7%) were polymorphic. Total heterozygosity for all populations sampled revealed high genetic diversity (Hsp = 0.207, HBT = 0.224). The AMOVA showed that most of the genetic variation was within populations (80.5%). At the species level, estimates of population differentiation, θ = 0.175 and θB = 0.194, indicated moderate gene flow among populations. The absence of a significant correlation between genetic and geographic distances indicated little isolation by geographic distance. The large genetic variation and diversity found in S. thurberi is consistent with its open reproductive system and the high mobility of bats, a major pollinator. However, small changes in number or kind of pollinators and seed dispersal agents, in the directionality of migratory routes, and/or in the timing of flowering and fruiting among populations, can critically affect gene flow dynamics. PMID:27015281

Population Genetic Structure of a Widespread Bat-Pollinated Columnar Cactus.

PubMed

Bustamante, Enriquena; Búrquez, Alberto; Scheinvar, Enrique; Eguiarte, Luis Enrique

2016-01-01

Bats are the main pollinators and seed dispersers of Stenocereus thurberi, a xenogamous columnar cactus of northwestern Mexico and a good model to illustrate spatial dynamics of gene flow in long-lived species. Previous studies in this cactus showed differences among populations in the type and abundance of pollinators, and in the timing of flowering and fruiting. In this study we analyzed genetic variability and population differentiation among populations. We used three primers of ISSR to analyze within and among populations genetic variation from eight widely separated populations of S. thurberi in Sonora, Mexico. Sixty-six out of 99 of the ISSR bands (P = 66.7%) were polymorphic. Total heterozygosity for all populations sampled revealed high genetic diversity (Hsp = 0.207, HBT = 0.224). The AMOVA showed that most of the genetic variation was within populations (80.5%). At the species level, estimates of population differentiation, θ = 0.175 and θB = 0.194, indicated moderate gene flow among populations. The absence of a significant correlation between genetic and geographic distances indicated little isolation by geographic distance. The large genetic variation and diversity found in S. thurberi is consistent with its open reproductive system and the high mobility of bats, a major pollinator. However, small changes in number or kind of pollinators and seed dispersal agents, in the directionality of migratory routes, and/or in the timing of flowering and fruiting among populations, can critically affect gene flow dynamics.

Factors Released from Endothelial Cells Exposed to Flow Impact Adhesion, Proliferation, and Fate Choice in the Adult Neural Stem Cell Lineage.

PubMed

Dumont, Courtney M; Piselli, Jennifer M; Kazi, Nadeem; Bowman, Evan; Li, Guoyun; Linhardt, Robert J; Temple, Sally; Dai, Guohao; Thompson, Deanna M

2017-08-15

The microvasculature within the neural stem cell (NSC) niche promotes self-renewal and regulates lineage progression. Previous work identified endothelial-produced soluble factors as key regulators of neural progenitor cell (NPC) fate and proliferation; however, endothelial cells (ECs) are sensitive to local hemodynamics, and the effect of this key physiological process has not been defined. In this study, we evaluated adult mouse NPC response to soluble factors isolated from static or dynamic (flow) EC cultures. Endothelial factors generated under dynamic conditions significantly increased neuronal differentiation, while those released under static conditions stimulated oligodendrocyte differentiation. Flow increases EC release of neurogenic factors and of heparin sulfate glycosaminoglycans that increase their bioactivity, likely underlying the enhanced neuronal differentiation. Additionally, endothelial factors, especially from static conditions, promoted adherent growth. Together, our data suggest that blood flow may impact proliferation, adhesion, and the neuron-glial fate choice of adult NPCs, with implications for diseases and aging that reduce flow.

Does sex-biased dispersal account for the lack of geographic and host-associated differentiation in introduced populations of an aphid parasitoid?

PubMed Central

Zepeda-Paulo, Francisca; Lavandero, Blas; Mahéo, Frédérique; Dion, Emilie; Outreman, Yannick; Simon, Jean-Christophe; Figueroa, Christian C

2015-01-01

Host recognition and use in female parasitoids strongly relies on host fidelity, a plastic behavior which can significantly restrict the host preferences of parasitoids, thus reducing the gene flow between parasitoid populations attacking different insect hosts. However, the effect of migrant males on the genetic differentiation of populations has been frequently ignored in parasitoids, despite its known impact on gene flow between populations. Hence, we studied the extent of gene flow mediated by female and male parasitoids by assessing sibship relationships among parasitoids within and between populations, and its impact on geographic and host-associated differentiation in the aphid parasitoid Aphidius ervi. We report evidences of a high gene flow among parasitoid populations on different aphid hosts and geographic locations. The high gene flow among parasitoid populations was found to be largely male mediated, suggested by significant differences in the distribution of full-sib and paternal half-sib dyads of parasitoid populations. PMID:26078852

Turbulent Compressible Convection with Rotation. 2; Mean Flows and Differential Rotation

NASA Technical Reports Server (NTRS)

Brummell, Nicholas H.; Hurlburt, Neal E.; Toomre, Juri

1998-01-01

The effects of rotation on turbulent, compressible convection within stellar envelopes are studied through three-dimensional numerical simulations conducted within a local f-plane model. This work seeks to understand the types of differential rotation that can be established in convective envelopes of stars like the Sun, for which recent helioseismic observations suggest an angular velocity profile with depth and latitude at variance with many theoretical predictions. This paper analyzes the mechanisms that are responsible for the mean (horizontally averaged) zonal and meridional flows that are produced by convection influenced by Coriolis forces. The compressible convection is considered for a range of Rayleigh, Taylor, and Prandtl (and thus Rossby) numbers encompassing both laminar and turbulent flow conditions under weak and strong rotational constraints. When the nonlinearities are moderate, the effects of rotation on the resulting laminar cellular convection leads to distinctive tilts of the cell boundaries away from the vertical. These yield correlations between vertical and horizontal motions that generate Reynolds stresses that can drive mean flows, interpretable as differential rotation and meridional circulations. Under more vigorous forcing, the resulting turbulent convection involves complicated and contorted fluid particle trajectories, with few clear correlations between vertical and horizontal motions, punctuated by an evolving and intricate downflow network that can extend over much of the depth of the layer. Within such networks are some coherent structures of vortical downflow that tend to align with the rotation axis. These yield a novel turbulent alignment mechanism, distinct from the laminar tilting of cellular boundaries, that can provide the principal correlated motions and thus Reynolds stresses and subsequently mean flows. The emergence of such coherent structures that can persist amidst more random motions is a characteristic of turbulence with symmetries broken by rotation and stratification. Such structure is here found to play a crucial role in defining the mean zonal and meridional flows that coexist with the convection. Though they are subject to strong inertial oscillations, the strength and type of the mean flows are determined by a combination of the laminar tilting and the turbulent alignment mechanisms. Varying the parameters produces a wide range of mean motions. Among these, some turbulent solutions exhibit a mean zonal velocity profile that is nearly constant with depth, much as deduced by helioseismology at midlatitudes within the Sun. The solutions exhibit a definite handedness, with the direction of the persistent mean flows often prescribing a spiral with depth near the boundaries, also in accord with helioseismic deductions. The mean helicity has a profile that is positive in the upper portion of the domain and negative in the lower portion, a property bearing on magnetic dynamo processes that may be realized within such rotating layers of turbulent convection.

Simulation of Oxygen Disintegration and Mixing With Hydrogen or Helium at Supercritical Pressure

NASA Technical Reports Server (NTRS)

Bellan, Josette; Taskinoglu, Ezgi

2012-01-01

The simulation of high-pressure turbulent flows, where the pressure, p, is larger than the critical value, p(sub c), for the species under consideration, is relevant to a wide array of propulsion systems, e.g. gas turbine, diesel, and liquid rocket engines. Most turbulence models, however, have been developed for atmospheric-p turbulent flows. The difference between atmospheric-p and supercritical-p turbulence is that, in the former situation, the coupling between dynamics and thermodynamics is moderate to negligible, but for the latter it is very significant, and can dominate the flow characteristics. The reason for this stems from the mathematical form of the equation of state (EOS), which is the perfect-gas EOS in the former case, and the real-gas EOS in the latter case. For flows at supercritical pressure, p, the large eddy simulation (LES) equations consist of the differential conservation equations coupled with a real-gas EOS. The equations use transport properties that depend on the thermodynamic variables. Compared to previous LES models, the differential equations contain not only the subgrid scale (SGS) fluxes, but also new SGS terms, each denoted as a correction. These additional terms, typically assumed null for atmospheric pressure flows, stem from filtering the differential governing equations, and represent differences between a filtered term and the same term computed as a function of the filtered flow field. In particular, the energy equation contains a heat-flux correction (q-correction) that is the difference between the filtered divergence of the heat flux and the divergence of the heat flux computed as a function of the filtered flow field. In a previous study, there was only partial success in modeling the q-correction term, but in this innovation, success has been achieved by using a different modeling approach. This analysis, based on a temporal mixing layer Direct Numerical Simulation database, shows that the focus in modeling the q-correction should be on reconstructing the primitive variable gradients rather than their coefficients, and proposes the approximate deconvolution model (ADM) as an effective means of flow field reconstruction for LES heat flux calculation. Further, results for a study conducted for temporal mixing layers initially containing oxygen in the lower stream, and hydrogen or helium in the upper stream, show that, for any LES, including SGS-flux models (constant-coefficient Gradient or Scale-Similarity models, dynamic-coefficient Smagorinsky/Yoshizawa or mixed Smagorinsky/Yoshizawa/Gradient models), the inclusion of the q-correction in the LES leads to the theoretical maximum reduction of the SGS heat-flux difference. The remaining error in modeling this new subgrid term is thus irreducible.

Spatial and intertemporal arbitrage in the California natural gas transportation and storage network

NASA Astrophysics Data System (ADS)

Uria Martinez, Rocio

Intertemporal and spatial price differentials should provide the necessary signals to allocate a commodity efficiently inside a network. This dissertation investigates the extent to which decisions in the California natural gas transportation and storage system are taken with an eye on arbitrage opportunities. Daily data about flows into and out of storage facilities in California over 2002-2006 and daily spreads on the NYMEX futures market are used to investigate whether the injection profile is consistent with the "supply-of-storage" curve first observed by Working for wheat. Spatial price differentials between California and producing regions fluctuate throughout the year, even though spot prices at trading hubs across North America are highly correlated. In an analysis of "residual supply", gas volumes directed to California are examined for the influence of those fluctuations in locational differentials. Daily storage decisions in California do seem to be influenced by a daily price signal that combines the intertemporal spread and the locational basis between California and the Henry Hub, in addition to strong seasonal and weekly cycles. The timing and magnitude of the response differs across storage facilities depending on the regulatory requirements they face and the type of customers they serve. In contrast, deviations in spatial price differentials from the levels dictated by relative seasonality in California versus competing regions do not trigger significant reallocations of flows into California. Available data for estimation of both the supply-of-storage and residual-supply curves aggregate the behavior of many individuals whose motivations and attentiveness to prices vary. The resulting inventory and flow profiles differ from those that a social planner would choose to minimize operating costs throughout the network. Such optimal allocation is deduced from a quadratic programming model, calibrated to 2004-2005, that acknowledges relative seasonality in demand, trade-offs between transportation and storage costs, infrastructure configuration and regulatory requirements. A comparison of the simulated equilibrium with observed behavior identifies where the arbitrage opportunities lie. Moreover, scenario analysis of such as a LNG terminal or additional storage capacity in California reveals the considerable indirect network effects brought about by changes at any node or arc.

Self-Similar Compressible Free Vortices

NASA Technical Reports Server (NTRS)

vonEllenrieder, Karl

1998-01-01

Lie group methods are used to find both exact and numerical similarity solutions for compressible perturbations to all incompressible, two-dimensional, axisymmetric vortex reference flow. The reference flow vorticity satisfies an eigenvalue problem for which the solutions are a set of two-dimensional, self-similar, incompressible vortices. These solutions are augmented by deriving a conserved quantity for each eigenvalue, and identifying a Lie group which leaves the reference flow equations invariant. The partial differential equations governing the compressible perturbations to these reference flows are also invariant under the action of the same group. The similarity variables found with this group are used to determine the decay rates of the velocities and thermodynamic variables in the self-similar flows, and to reduce the governing partial differential equations to a set of ordinary differential equations. The ODE's are solved analytically and numerically for a Taylor vortex reference flow, and numerically for an Oseen vortex reference flow. The solutions are used to examine the dependencies of the temperature, density, entropy, dissipation and radial velocity on the Prandtl number. Also, experimental data on compressible free vortex flow are compared to the analytical results, the evolution of vortices from initial states which are not self-similar is discussed, and the energy transfer in a slightly-compressible vortex is considered.

Differential Responses of Post-Exercise Recovery of Leg Blood Flow and Oxygen Uptake Kinetics in HFpEF versus HFrEF.

PubMed

Thompson, Richard B; Pagano, Joseph J; Mathewson, Kory W; Paterson, Ian; Dyck, Jason R; Kitzman, Dalane W; Haykowsky, Mark J

2016-01-01

The goals of the current study were to compare leg blood flow, oxygen extraction and oxygen uptake (VO2) after constant load sub-maximal unilateral knee extension (ULKE) exercise in patients with heart failure with reduced ejection fraction (HFrEF) compared to those with preserved ejection fraction (HFpEF). Previously, it has been shown that prolonged whole body VO2 recovery kinetics are directly related to disease severity and all-cause mortality in HFrEF patients. To date, no study has simultaneously measured muscle-specific blood flow and oxygen extraction post exercise recovery kinetics in HFrEF or HFpEF patients; therefore it is unknown if muscle VO2 recovery kinetics, and more specifically, the recovery kinetics of blood flow and oxygen extraction at the level of the muscle, differ between HF phenotypes. Ten older (68±10yrs) HFrEF (n = 5) and HFpEF (n = 5) patients performed sub-maximal (85% of maximal weight lifted during an incremental test) ULKE exercise for 4 minutes. Femoral venous blood flow and venous O2 saturation were measured continuously from the onset of end-exercise, using a novel MRI method, to determine off-kinetics (mean response times, MRT) for leg VO2 and its determinants. HFpEF and HFrEF patients had similar end-exercise leg blood flow (1.1±0.6 vs. 1.2±0.6 L/min, p>0.05), venous saturation (42±12 vs. 41±11%, p>0.05) and VO2 (0.13±0.08 vs. 0.11±0.05 L/min, p>0.05); however HFrEF had significantly delayed recovery MRT for flow (292±135sec. vs 105±63sec., p = 0.004) and VO2 (95±37sec. vs. 47±15sec., p = 0.005) compared to HFpEF. Impaired muscle VO2 recovery kinetics following ULKE exercise differentiated HFrEF from HFpEF patients and suggests distinct underlying pathology and potential therapeutic approaches in these populations.

Investigation of electrophoretic exclusion method for the concentration and differentiation of proteins.

PubMed

Meighan, Michelle M; Vasquez, Jared; Dziubcynski, Luke; Hews, Sarah; Hayes, Mark A

2011-01-01

This work presents a technique termed as "electrophoretic exclusion" that is capable of differentiation and concentration of proteins in bulk solution. In this method, a hydrodynamic flow is countered by the electrophoretic velocity to prevent a species from entering into a channel. The separation can be controlled by changing the flow rate or applied electric potential in order to exclude a certain species selectively while allowing others to pass through the capillary. The exclusion of various proteins is investigated using a flow-injection regime of the method. Concentration of myoglobin of up to 1200 times the background concentration in 60 s was demonstrated. Additionally, negatively charged myoglobin was separated from a solution containing negatively charged allophycocyanin. Cationic cytochrome c was also differentiated from a solution with allophycocyanin. The ability to differentially transport species in bulk solution enables parallel and serial separation modes not available with other separations schemes.

Diversity and Genetic Structure of the Mexican Endemic Epiphyte Tillandsia achyrostachys E. Morr. ex Baker var. achyrostachys (Bromeliaceae)

PubMed Central

GONZÁLEZ-ASTORGA, JORGE; CRUZ-ANGÓN, ANDREA; FLORES-PALACIOS, ALEJANDRO; VOVIDES, ANDREW P.

2004-01-01

• Background and Aims The monoecious, bird-pollinated epiphytic Tillandsia achyrostachys E. Morr. ex Baker var. achyrostachys is an endemic bromeliad of the tropical dry forests of Mexico with clonal growth. In the Sierra de Huautla Natural Reserve this species shows a host preference for Bursera copallifera (Sessé & Moc ex. DC) Bullock. As a result of deforestation in the study area, B. copallifera has become a rare tree species in the remaining forest patches. This human-induced disturbance has directly affected the population densities of T. achyrostachys. In this study the genetic consequences of habitat fragmentation were assessed by comparing the genetic diversity, gene flow and genetic differentiation in six populations of T. achyrostachys in the Sierra de Huautla Natural Reserve, Mexico. • Methods Allozyme electrophoresis of sixteen loci (eleven polymorphic and five monomorphic) were used. The data were analysed with standard statistical approximations for obtaining diversity, genetic structure and gene flow. • Key Results Genetic diversity and allelic richness were: HE = 0·21 ± 0·02, A = 1·86 ± 0·08, respectively. F-statistics revealed a deficiency of heterozygous plants in all populations (Fit = 0·65 ± 0·02 and Fis = 0·43 ± 0·06). Significant genetic differentiation between populations was detected (Fst = 0·39 ± 0·07). Average gene flow between pairs of populations was relatively low and had high variation (Nm = 0·46 ± 0·21), which denotes a pattern of isolation by distance. The genetic structure of populations of T. achyrostachys suggests that habitat fragmentation has reduced allelic richness and genetic diversity, and increased significant genetic differentiation (by approx. 40 %) between populations. • Conclusions The F-statistic values (>0) and the level of gene flow found suggest that habitat fragmentation has broken up the former population structure. In this context, it is proposed that the host trees of T. achyrostachys should be considered as a conservation priority, since they represent the limiting factor to bromeliad population growth and connectivity. PMID:15319228

A Naturally-Calibrated Flow Law for Quartz

NASA Astrophysics Data System (ADS)

Lusk, A. D.; Platt, J. P.

2017-12-01

Flow laws for power-law behavior of quartz deforming by crystal-plastic processes with grain size sensitive creep included take the general form: ė = A σn f(H2O) exp(-Q/RT) dmWhere A - prefactor; σ - differential stress; n - stress exponent; f(H2O) - water fugacity; Q - activation energy; R - gas constant; T - temperature (K); d - grain size sensitivity raised to power m. Assuming the dynamically recrystallized grain size for quartz follows the peizometric relationship, substitute dm = (K σ-p)m, where K - piezometric constant; σ - differential stress; p - piezometric exponent. Rearranging the above flow law: ė = A K σ(n-pm) f(H2O) exp(-Q/RT)We use deformation temperatures, paleo-stresses, and strain rates calculated from rocks deformed in the Caledonian Orogeny, NW Scotland, along with existing experimental data, to compare naturally-calibrated values of stress exponent (n-pm) and activation energy (Q) to those determined experimentally. Microstructures preserved in the naturally-strained rocks closely resemble those produced by experimental work, indicating that quartz was deformed by the same mechanism(s). These observations validate the use of predetermined values for A as well as the addition of experimental data to calculate Q. Values for f(H2O) are based on calculated pressure and temperature conditions. Using the abovementioned constraints, we compare results, discuss challenges, and explore implications of naturally- vs. experimentally-derived flow laws for dislocation creep in quartz. Rocks used for this study include quartzite and quartz-rich psammite of the Cambrian-Ordovician shelf sequence and tectonically overlying Moine Supergroup. In both cases, quartz is likely the primary phase that controlled rheological behavior. We use the empirically derived piezometer for the dynamically recrystallized grain size of quartz to calculate the magnitude of differential stress, along with the Ti-in-quartz thermobarometer and the c-axis opening angle thermometer to determine temperatures of deformation. Tensor strain rates are calculated from plate convergence rate, based on total displacement and duration of thrusting within the Moine thrust zone, and shear zone thickness calculated from four detailed structural and microstructural transects taken parallel to the direction of displacement.

Effect of fuel composition and differential diffusion on flame stabilization in reacting syngas jets in turbulent cross-flow

DOE PAGES

Minamoto, Yuki; Kolla, Hemanth; Grout, Ray W.; ...

2015-07-24

Here, three-dimensional direct numerical simulation results of a transverse syngas fuel jet in turbulent cross-flow of air are analyzed to study the influence of varying volume fractions of CO relative to H 2 in the fuel composition on the near field flame stabilization. The mean flame stabilizes at a similar location for CO-lean and CO-rich cases despite the trend suggested by their laminar flame speed, which is higher for the CO-lean condition. To identify local mixtures having favorable mixture conditions for flame stabilization, explosive zones are defined using a chemical explosive mode timescale. The explosive zones related to flame stabilizationmore » are located in relatively low velocity regions. The explosive zones are characterized by excess hydrogen transported solely by differential diffusion, in the absence of intense turbulent mixing or scalar dissipation rate. The conditional averages show that differential diffusion is negatively correlated with turbulent mixing. Moreover, the local turbulent Reynolds number is insufficient to estimate the magnitude of the differential diffusion effect. Alternatively, the Karlovitz number provides a better indicator of the importance of differential diffusion. A comparison of the variations of differential diffusion, turbulent mixing, heat release rate and probability of encountering explosive zones demonstrates that differential diffusion predominantly plays an important role for mixture preparation and initiation of chemical reactions, closely followed by intense chemical reactions sustained by sufficient downstream turbulent mixing. The mechanism by which differential diffusion contributes to mixture preparation is investigated using the Takeno Flame Index. The mean Flame Index, based on the combined fuel species, shows that the overall extent of premixing is not intense in the upstream regions. However, the Flame Index computed based on individual contribution of H 2 or CO species reveals that hydrogen contributes significantly to premixing, particularly in explosive zones in the upstream leeward region, i.e. at the preferred flame stabilization location. Therefore, a small amount of H 2 diffuses much faster than CO, creating relatively homogeneous mixture pockets depending on the competition with turbulent mixing. These pockets, together with high H 2 reactivity, contribute to stabilizing the flame at a consistent location regardless of the CO concentration in the fuel for the present range of DNS conditions.« less

Solution of weakly compressible isothermal flow in landfill gas collection networks

NASA Astrophysics Data System (ADS)

Nec, Y.; Huculak, G.

2017-12-01

Pipe networks collecting gas in sanitary landfills operate under the regime of a weakly compressible isothermal flow of ideal gas. The effect of compressibility has been traditionally neglected in this application in favour of simplicity, thereby creating a conceptual incongruity between the flow equations and thermodynamic equation of state. Here the flow is solved by generalisation of the classic Darcy-Weisbach equation for an incompressible steady flow in a pipe to an ordinary differential equation, permitting continuous variation of density, viscosity and related fluid parameters, as well as head loss or gain due to gravity, in isothermal flow. The differential equation is solved analytically in the case of ideal gas for a single edge in the network. Thereafter the solution is used in an algorithm developed to construct the flow equations automatically for a network characterised by an incidence matrix, and determine pressure distribution, flow rates and all associated parameters therein.

The effects of differential flow between rational surfaces on toroidal resistive MHD modes

NASA Astrophysics Data System (ADS)

Brennan, Dylan; Halfmoon, Michael; Rhodes, Dov; Cole, Andrew; Okabayashi, Michio; Paz-Soldan, Carlos; Finn, John

2016-10-01

Differential flow between resonant surfaces can strongly affect the coupling and penetration of resonant components of resistive modes, and yet this mechanism is not yet fully understood. This study focuses on the evolution of tearing instabilities and the penetration of imposed resonant magnetic perturbations (RMPs) in tokamak configurations relevant to DIII-D and ITER, including equilibrium flow shear. It has been observed on DIII-D that the onset of tearing instabilities leading to disruption is often coincident with a loss of differential rotation between a higher m/n tearing surface (normally the 4/3 or 3/2) and a lower m/n tearing surface (normally the 2/1). Imposing RMPs can strongly affect this coupling and the torques between the modes. We apply the nonlinear 3-D resistive magnetohydrodynamic (MHD) code NIMROD to study the mechanisms by which these couplings occur. Reduced MHD analyses are applied to study the effects of differential flow between resonant surfaces in the simulations. Interaction between resonant modes can cause significant energy transfer between them, effectively stabilizing one mode while the other grows. The flow mitigates this transfer, but also affects the individual modes. The combination of these effects determines the nonlinear outcome. Supported by US DOE Grants DE-SC0014005 and DE-SC0014119.

The infantile psychic trauma from us to Freud: pure trauma, retroactivity and reconstruction.

PubMed

Baranger, M; Baranger, W; Mom, J M

1988-01-01

In the works of Freud, the concept of childhood psychic trauma evolves in the direction of increasing complexity. The authors maintain that this expansion corresponds to a new conception of retroactive temporality (Nachträglich), which is precisely the one we use in the analytic process of reconstruction and historicization from the present toward the past. We are thus led to differentiate the extreme form of the unassimilable 'pure' Trauma, nearly pure death drive, from the retroactively historicized forms which are reintegrated into the continuity of a vital flow of time that we 'invent' in analytic work.

[The rural-urban nature and geographical nature of patterns of internal migration].

PubMed

Raczynski, D

1981-07-01

The rural-urban nature and geographical patterns of internal migration in Chile are studied. The magnitude, nature, and relative importance of rural-urban, interurban, inter-rural, and urban-rural movements in the country are examined, with a focus on the impact of internal migration on urbanization and on the demographic growth of cities and rural areas. Rural and urban differentials in propensity to migrate and in the capacity to attract and retain population are investigated using 1970 census data on migratory flows to and from the Santiago metropolitan area and those directed to other parts of the country.

Observation of current reversal in the scanning tunneling spectra of fullerene-like WS2 nanoparticles.

PubMed

Azulay, Doron; Kopnov, Frieda; Tenne, Reshef; Balberg, Isaac; Millo, Oded

2006-04-01

Current-voltage characteristics measured using STM on fullerene-like WS2 nanoparticles show zero-bias current and contain segments in which the tunneling current flows opposite to the applied bias voltage. In addition, negative differential conductance peaks emerge in these reversed current segments, and the characteristics are hysteretic with respect to the change in the voltage sweep direction. Such unusual features resemble those appearing in cyclic voltammograms, but are uniquely observed here in tunneling spectra measured in vacuum, as well as in ambient and dry atmosphere conditions. This behavior is attributed to tunneling-driven electrochemical processes.

Imaging of vascular lesions of the head and neck.

PubMed

Griauzde, Julius; Srinivasan, Ashok

2015-01-01

The diagnosis of vascular lesions of the head and neck should be directed by classifying the lesions as tumors or malformations and by determining their flow characteristics. Location of the lesion is key when differentiating between vascular neoplasms. Ultrasonography is an appropriate screening tool; MRI is often used to confirm the diagnosis. Computed tomography can be used for further characterization of the lesion, particularly when there is bony involvement. In many cases, vascular lesions grow to be extensive. In these cases, percutaneous sclerotherapy or embolization therapy can be employed to aid in surgical resection. Copyright © 2015 Elsevier Inc. All rights reserved.

Nuclear collective flow and charged-pion emission in Ne-nucleus collisions at E/A = 800 MeV

NASA Technical Reports Server (NTRS)

Gosset, J.; Valette, O.; Babinet, R.; Alard, J. P.; Augerat, J.

1989-01-01

Triple-differential cross sections of charged pions were measured for collisions of Ne projectiles at E/A = 800 MeV with NaF, Nb, and Pb targets. The reaction plane was estimated event by event from the light-baryon momentum distribution. For heavy targets, preferential emission of charged pions away from the interaction zone toward the projectile side was observed in the transverse direction. Such a preferential emission, which is not predicted by cascade calculations, may be attributed to a stronger pion absorption by the heavier spectator remnant.

Nuclear collective flow and charged-pion emission in Ne-nucleus collisions at E/A = 800 MeV

NASA Technical Reports Server (NTRS)

Gosset, J.; Valette, O.; Alard, J. P.; Augerat, J.; Babinet, R.; Bastid, N.; Brochard, F.; De Marco, N.; Dupieux, P.; Fodor, Z.;

Absorbing boundary conditions for second-order hyperbolic equations

NASA Technical Reports Server (NTRS)

Jiang, Hong; Wong, Yau Shu

1989-01-01

A uniform approach to construct absorbing artificial boundary conditions for second-order linear hyperbolic equations is proposed. The nonlocal boundary condition is given by a pseudodifferential operator that annihilates travelling waves. It is obtained through the dispersion relation of the differential equation by requiring that the initial-boundary value problem admits the wave solutions travelling in one direction only. Local approximation of this global boundary condition yields an nth-order differential operator. It is shown that the best approximations must be in the canonical forms which can be factorized into first-order operators. These boundary conditions are perfectly absorbing for wave packets propagating at certain group velocities. A hierarchy of absorbing boundary conditions is derived for transonic small perturbation equations of unsteady flows. These examples illustrate that the absorbing boundary conditions are easy to derive, and the effectiveness is demonstrated by the numerical experiments.

A comparison of the Method of Lines to finite difference techniques in solving time-dependent partial differential equations. [with applications to Burger equation and stream function-vorticity problem

NASA Technical Reports Server (NTRS)

Kurtz, L. A.; Smith, R. E.; Parks, C. L.; Boney, L. R.

1978-01-01

Steady state solutions to two time dependent partial differential systems have been obtained by the Method of Lines (MOL) and compared to those obtained by efficient standard finite difference methods: (1) Burger's equation over a finite space domain by a forward time central space explicit method, and (2) the stream function - vorticity form of viscous incompressible fluid flow in a square cavity by an alternating direction implicit (ADI) method. The standard techniques were far more computationally efficient when applicable. In the second example, converged solutions at very high Reynolds numbers were obtained by MOL, whereas solution by ADI was either unattainable or impractical. With regard to 'set up' time, solution by MOL is an attractive alternative to techniques with complicated algorithms, as much of the programming difficulty is eliminated.

Bio-medical flow sensor. [intrvenous procedures

NASA Technical Reports Server (NTRS)

Winkler, H. E. (Inventor)

1981-01-01

A bio-medical flow sensor including a packageable unit of a bottle, tubing and hypodermic needle which can be pre-sterilized and is disposable. The tubing has spaced apart tubular metal segments. The temperature of the metal segments and fluid flow therein is sensed by thermistors and at a downstream location heat is input by a resistor to the metal segment by a control electronics. The fluids flow and the electrical power required for the resisto to maintain a constant temperature differential between the tubular metal segments is a measurable function of fluid flow through the tubing. The differential temperature measurement is made in a control electronics and also can be used to control a flow control valve or pump on the tubing to maintain a constant flow in the tubing and to shut off the tubing when air is present in the tubing.

DISCHARGE AND DEPTH BEHIND A PARTIALLY BREACHED DAM.

USGS Publications Warehouse

Chen, Cheng-lung

1987-01-01

The role that the velocity-distribution correction factor plays in the determination of the flood discharge and corresponding flow depth behind a partially breached dam is investigated. Assumption of a uniformly progressive flow for an established dam-break flood in a rectangular channel of infinite extent leads to the formulation of a theoretical relation between the depth and velocity of flow expressed in differential form. Integrating this ordinary differential equation, one can express the velocity in terms of the depth.

Sensory trait variation in an echolocating bat suggests roles for both selection and plasticity

PubMed Central

2014-01-01

Background Across heterogeneous environments selection and gene flow interact to influence the rate and extent of adaptive trait evolution. This complex relationship is further influenced by the rarely considered role of phenotypic plasticity in the evolution of adaptive population variation. Plasticity can be adaptive if it promotes colonization and survival in novel environments and in doing so may increase the potential for future population differentiation via selection. Gene flow between selectively divergent environments may favour the evolution of phenotypic plasticity or conversely, plasticity itself may promote gene flow, leading to a pattern of trait differentiation in the presence of gene flow. Variation in sensory traits is particularly informative in testing the role of environment in trait and population differentiation. Here we test the hypothesis of ‘adaptive differentiation with minimal gene flow’ in resting echolocation frequencies (RF) of Cape horseshoe bats (Rhinolophus capensis) across a gradient of increasingly cluttered habitats. Results Our analysis reveals a geographically structured pattern of increasing RF from open to highly cluttered habitats in R. capensis; however genetic drift appears to be a minor player in the processes influencing this pattern. Although Bayesian analysis of population structure uncovered a number of spatially defined mitochondrial groups and coalescent methods revealed regional-scale gene flow, phylogenetic analysis of mitochondrial sequences did not correlate with RF differentiation. Instead, habitat discontinuities between biomes, and not genetic and geographic distances, best explained echolocation variation in this species. We argue that both selection for increased detection distance in relatively less cluttered habitats and adaptive phenotypic plasticity may have influenced the evolution of matched echolocation frequencies and habitats across different populations. Conclusions Our study reveals significant sensory trait differentiation in the presence of historical gene flow and suggests roles for both selection and plasticity in the evolution of echolocation variation in R. capensis. These results highlight the importance of population level analyses to i) illuminate the subtle interplay between selection, plasticity and gene flow in the evolution of adaptive traits and ii) demonstrate that evolutionary processes may act simultaneously and that their relative influence may vary across different environments. PMID:24674227

Derivation of vascular endothelial cells from human embryonic stem cells under GMP-compliant conditions: towards clinical studies in ischaemic disease.

PubMed

Kaupisch, A; Kennedy, L; Stelmanis, V; Tye, B; Kane, N M; Mountford, J C; Courtney, A; Baker, A H

2012-10-01

Revascularisation of ischaemic tissue remains an area of substantial unmet clinical need in cardiovascular disease. Strategies to induce therapeutic angiogenesis are therefore attractive. Our recent focus has been on human embryonic stem cell (hESC) strategies since hESC can be maintained in a pluripotent state or differentiated into any desired cell type, including endothelial cells (EC), under defined differentiation culture conditions. We recently published a protocol for non-good manufacturing practice (GMP) feeder- and serum-free hESC-EC-directed monolayer differentiation to vascular EC demonstrating the potential to generate hESC-derived EC in a GMP-compliant manner suitable for use in clinical trials. In this study we modified that laboratory protocol to GMP compliance. EC production was confirmed by flow cytometry, qRT-PCR and production of vascular structures in Matrigel®, yielding approximately 30 % mature VE-cadherin(+)/PECAM-1(+) cells using the GMP-compliant hESC line RC13. In conclusion, we have successfully demonstrated the production of vascular EC under GMP-compliant conditions suitable for clinical evaluation.

Phenotypic divergence despite low genetic differentiation in house sparrow populations.

PubMed

Ben Cohen, Shachar; Dor, Roi

2018-01-10

Studying patterns of phenotypic variation among populations can shed light on the drivers of evolutionary processes. The house sparrow (Passer domesticus) is one of the world's most ubiquitous bird species, as well as a successful invader. We investigated phenotypic variation in house sparrow populations across a climatic gradient and in relation to a possible scenario of an invasion. We measured variation in morphological, coloration, and behavioral traits (exploratory behavior and neophobia) and compared it to the neutral genetic variation. We found that sparrows were larger and darker in northern latitudes, in accordance with Bergmann's and Gloger's biogeographic rules. Morphology and behavior mostly differed between the southernmost populations and the other regions, supporting the possibility of an invasion. Genetic differentiation was low and diversity levels were similar across populations, indicating high gene flow. Nevertheless, the southernmost and northern populations differed genetically to some extent. Furthermore, genetic differentiation (F ST ) was lower in comparison to phenotypic variation (P ST ), indicating that the phenotypic variation is shaped by directional selection or by phenotypic plasticity. This study expands our knowledge on evolutionary mechanisms and biological invasions.

Investigation of Micro- and Nanosized Particle Erosion in a 90° Pipe Bend Using a Two-Phase Discrete Phase Model

PubMed Central

Safaei, M. R.; Mahian, O.; Garoosi, F.; Hooman, K.; Karimipour, A.; Kazi, S. N.; Gharehkhani, S.

2014-01-01

This paper addresses erosion prediction in 3-D, 90° elbow for two-phase (solid and liquid) turbulent flow with low volume fraction of copper. For a range of particle sizes from 10 nm to 100 microns and particle volume fractions from 0.00 to 0.04, the simulations were performed for the velocity range of 5–20 m/s. The 3-D governing differential equations were discretized using finite volume method. The influences of size and concentration of micro- and nanoparticles, shear forces, and turbulence on erosion behavior of fluid flow were studied. The model predictions are compared with the earlier studies and a good agreement is found. The results indicate that the erosion rate is directly dependent on particles' size and volume fraction as well as flow velocity. It has been observed that the maximum pressure has direct relationship with the particle volume fraction and velocity but has a reverse relationship with the particle diameter. It also has been noted that there is a threshold velocity as well as a threshold particle size, beyond which significant erosion effects kick in. The average friction factor is independent of the particle size and volume fraction at a given fluid velocity but increases with the increase of inlet velocities. PMID:25379542

Transspinal direct current stimulation modulates migration and proliferation of adult newly born spinal cells in mice.

PubMed

Samaddar, Sreyashi; Vazquez, Kizzy; Ponkia, Dipen; Toruno, Pedro; Sahbani, Karim; Begum, Sultana; Abouelela, Ahmed; Mekhael, Wagdy; Ahmed, Zaghloul

2017-02-01

Direct current electrical fields have been shown to be a major factor in the regulation of cell proliferation, differentiation, migration, and survival, as well as in the maturation of dividing cells during development. During adulthood, spinal cord cells are continuously produced in both animals and humans, and they hold great potential for neural restoration following spinal cord injury. While the effects of direct current electrical fields on adult-born spinal cells cultured ex vivo have recently been reported, the effects of direct current electrical fields on adult-born spinal cells in vivo have not been characterized. Here, we provide convincing findings that a therapeutic form of transspinal direct current stimulation (tsDCS) affects the migration and proliferation of adult-born spinal cells in mice. Specifically, cathodal tsDCS attracted the adult-born spinal cells, while anodal tsDCS repulsed them. In addition, both tsDCS polarities caused a significant increase in cell number. Regarding the potential mechanisms involved, both cathodal and anodal tsDCS caused significant increases in expression of brain-derived neurotrophic factor, while expression of nerve growth factor increased and decreased, respectively. In the spinal cord, both anodal and cathodal tsDCS increased blood flow. Since blood flow and angiogenesis are associated with the proliferation of neural stem cells, increased blood flow may represent a major factor in the modulation of newly born spinal cells by tsDCS. Consequently, we propose that the method and novel findings presented in the current study have the potential to facilitate cellular, molecular, and/or bioengineering strategies to repair injured spinal cords. NEW & NOTEWORTHY Our results indicate that transspinal direct current stimulation (tsDCS) affects the migratory pattern and proliferation of adult newly born spinal cells, a cell population which has been implicated in learning and memory. In addition, our results suggest a potential mechanism of action regarding the functional effects of applying direct current. Thus tsDCS may represent a novel method by which to manipulate the migration and cell number of adult newly born cells and restore functions following brain or spinal cord injury. Copyright © 2017 the American Physiological Society.

Aerodynamic tip desensitization in axial flow turbines

NASA Astrophysics Data System (ADS)

Dey, Debashis

The leakage flow near the tip of unshrouded rotor blades in axial turbines imposes significant thermal loads on the blade. It is also responsible for up to a third of aerodynamic losses in a turbine stage. The leakage flow, mainly induced by the pressure differential across the rotor tip section, usually rolls into a stream-wise vertical structure near the suction side part of the blade tip. The current study uses several concepts to reduce the severity of losses introduced by the leakage vortex. Three tip desensitization techniques, both active and passive, are examined. Coolant flow from a tip trench is used to counter the momentum of the leakage jet. Next, a very short winglet obtained by slightly extending the tip platform in the tangential direction is investigated. Lastly, the widely used concept of squealer tip is studied. The current investigation is performed in the Axial Flow Turbine Research Facility (AFTRF) of the Pennsylvania State University. Rotating frame five hole probe measurements as well as stationary frame phase averaged total pressure measurements downstream of a single stage turbine facility were taken. The study enables one to draw conclusions about the nature of the flowfield in the rotor tip region. It also shows that significant efficiency gains could be obtained by using some of these techniques.

Cytoplasmic flows as signatures for the mechanics of mitotic positioning

PubMed Central

Nazockdast, Ehssan; Rahimian, Abtin; Needleman, Daniel; Shelley, Michael

2017-01-01

The proper positioning of mitotic spindle in the single-cell Caenorhabditis elegans embryo is achieved initially by the migration and rotation of the pronuclear complex (PNC) and its two associated astral microtubules (MTs). Pronuclear migration produces global cytoplasmic flows that couple the mechanics of all MTs, the PNC, and the cell periphery with each other through their hydrodynamic interactions (HIs). We present the first computational study that explicitly accounts for detailed HIs between the cytoskeletal components and demonstrate the key consequences of HIs for the mechanics of pronuclear migration. First, we show that, because of HIs between the MTs, the cytoplasm-filled astral MTs behave like a porous medium, with its permeability decreasing with increasing the number of MTs. We then directly study the dynamics of PNC migration under various force-transduction models, including the pushing or pulling of MTs at the cortex and the pulling of MTs by cytoplasmically bound force generators. Although achieving proper position and orientation on reasonable time scales does not uniquely choose a model, we find that each model produces a different signature in its induced cytoplasmic flow. We suggest that cytoplasmic flows can be used to differentiate between mechanisms. PMID:28331070

The stability of the contact interface of cylindrical and spherical shock tubes

NASA Astrophysics Data System (ADS)

Crittenden, Paul E.; Balachandar, S.

2018-06-01

The stability of the contact interface for radial shock tubes is investigated as a model for explosive dispersal. The advection upstream splitting method with velocity and pressure diffusion (AUSM+-up) is used to solve for the radial base flow. To investigate the stability of the resulting contact interface, perturbed governing equations are derived assuming harmonic modes in the transverse directions. The perturbed harmonic flow is solved by assuming an initial disturbance and using a perturbed version of AUSM+-up derived in this paper. The intensity of the perturbation near the contact interface is computed and compared to theoretical results obtained by others. Despite the simplifying assumptions of the theoretical analysis, very good agreement is observed. Not only can the magnitude of the instability be predicted during the initial expansion, but also remarkably the agreement between the numerical and theoretical results can be maintained through the collision between the secondary shock and the contact interface. Since the theoretical results only depend upon the time evolution of the base flow, the stability of various modes could be quickly investigated without explicitly solving a system of partial differential equations for the perturbed flow.

Clonal populations of amniotic cells by dilution and direct plating: evidence for hidden diversity.

PubMed

Wilson, Patricia G; Devkota, Lorna; Payne, Tiffany; Crisp, Laddie; Winter, Allison; Wang, Zhan

2012-01-01

Fetal cells are widely considered a superior cell source for regenerative medicine; fetal cells show higher proliferative capacity and have undergone fewer replicative cycles that could generate spontaneous mutations. Fetal cells in amniotic fluid were among the first normal primary cells to be cultured ex vivo, but the undefined composition of amniotic fluid has hindered advance for regenerative applications. We first developed a highly efficient method to generate clonal populations by dilution of amniocentesis samples in media and direct plating without intervening refrigeration, centrifugation, or exposure of cells to the paracrine effects in mixed cell cultures. More than 40 clonal populations were recovered from 4 amniocentesis samples and representative clones were characterized by flow cytometry, conventional assays for differentiation potential, immunofluorescence imaging, and transcript analysis. The results revealed previously unreported diversity among stromal and epithelial cell types and identified unique cell types that could be lost or undetected in mixed cell populations. The differentiation potential of amniotic cells proved to be uncoupled from expression of definitive cell surface or cytoplasmic markers for stromal and epithelial cells. Evidence for diversity among stromal and epithelial cells in amniotic fluid bears on interpretations applied to molecular and functional tests of amniotic cell populations.

High-Throughput Screening Assay for Embryoid Body Differentiation of Human Embryonic Stem Cells

PubMed Central

Outten, Joel T.; Gadue, Paul; French, Deborah L.; Diamond, Scott L.

2012-01-01

Serum-free human pluripotent stem cell media offer the potential to develop reproducible clinically applicable differentiation strategies and protocols. The vast array of possible growth factor and cytokine combinations for media formulations makes differentiation protocol optimization both labor and cost-intensive. This unit describes a 96-well plate, 4-color flow cytometry-based screening assay to optimize pluripotent stem cell differentiation protocols. We provide conditions both to differentiate human embryonic stem cells (hESCs) to the three primary germ layers, ectoderm, endoderm, and mesoderm, and to utilize flow cytometry to distinguish between them. This assay exhibits low inter-well variability and can be utilized to efficiently screen a variety of media formulations, reducing cost, incubator space, and labor. Protocols can be adapted to a variety of differentiation stages and lineages. PMID:22415836

Hybrid Upwinding for Two-Phase Flow in Heterogeneous Porous Media with Buoyancy and Capillarity

NASA Astrophysics Data System (ADS)

Hamon, F. P.; Mallison, B.; Tchelepi, H.

2016-12-01

In subsurface flow simulation, efficient discretization schemes for the partial differential equations governing multiphase flow and transport are critical. For highly heterogeneous porous media, the temporal discretization of choice is often the unconditionally stable fully implicit (backward-Euler) method. In this scheme, the simultaneous update of all the degrees of freedom requires solving large algebraic nonlinear systems at each time step using Newton's method. This is computationally expensive, especially in the presence of strong capillary effects driven by abrupt changes in porosity and permeability between different rock types. Therefore, discretization schemes that reduce the simulation cost by improving the nonlinear convergence rate are highly desirable. To speed up nonlinear convergence, we present an efficient fully implicit finite-volume scheme for immiscible two-phase flow in the presence of strong capillary forces. In this scheme, the discrete viscous, buoyancy, and capillary spatial terms are evaluated separately based on physical considerations. We build on previous work on Implicit Hybrid Upwinding (IHU) by using the upstream saturations with respect to the total velocity to compute the relative permeabilities in the viscous term, and by determining the directionality of the buoyancy term based on the phase density differences. The capillary numerical flux is decomposed into a rock- and geometry-dependent transmissibility factor, a nonlinear capillary diffusion coefficient, and an approximation of the saturation gradient. Combining the viscous, buoyancy, and capillary terms, we obtain a numerical flux that is consistent, bounded, differentiable, and monotone for homogeneous one-dimensional flow. The proposed scheme also accounts for spatially discontinuous capillary pressure functions. Specifically, at the interface between two rock types, the numerical scheme accurately honors the entry pressure condition by solving a local nonlinear problem to compute the numerical flux. Heterogeneous numerical tests demonstrate that this extended IHU scheme is non-oscillatory and convergent upon refinement. They also illustrate the superior accuracy and nonlinear convergence rate of the IHU scheme compared with the standard phase-based upstream weighting approach.

Flow Diode and Method for Controlling Fluid Flow Origin of the Invention

NASA Technical Reports Server (NTRS)

Dyson, Rodger W (Inventor)

2015-01-01

A flow diode configured to permit fluid flow in a first direction while preventing fluid flow in a second direction opposite the first direction is disclosed. The flow diode prevents fluid flow without use of mechanical closures or moving parts. The flow diode utilizes a bypass flowline whereby all fluid flow in the second direction moves into the bypass flowline having a plurality of tortuous portions providing high fluidic resistance. The portions decrease in diameter such that debris in the fluid is trapped. As fluid only travels in one direction through the portions, the debris remains trapped in the portions.

Effects of retarded electrical fields on observables sensitive to the high-density behavior of the nuclear symmetry energy in heavy-ion collisions at intermediate energies

NASA Astrophysics Data System (ADS)

Wei, Gao-Feng; Li, Bao-An; Yong, Gao-Chan; Ou, Li; Cao, Xin-Wei; Liu, Xu-Yang

2018-03-01

Within the isospin- and momentum-dependent transport model IBUU11, we examine the relativistic retardation effects of electrical fields on the π-/π+ ratio and neutron-proton differential transverse flow in heavy-ion collisions at intermediate energies. Compared to the static Coulomb fields, the retarded electric fields of fast-moving charges are known to be anisotropic and the associated relativistic corrections can be significant. They are found to increase the number of energetic protons in the participant region at the maximum compression by as much as 25% but that of energetic neutrons by less than 10% in 197Au+197Au reactions at a beam energy of 400 MeV/nucleon. Consequently, more π+ and relatively fewer π- mesons are produced, leading to an appreciable reduction of the π-/π+ ratio compared to calculations with the static Coulomb fields. Also, the neutron-proton differential transverse flow, as another sensitive probe of high-density symmetry energy, is also decreased appreciably due to the stronger retarded electrical fields in directions perpendicular to the velocities of fast-moving charges compared to calculations using the isotropic static electrical fields. Moreover, the retardation effects on these observables are found to be approximately independent of the reaction impact parameter.

Revealing metabolic storage processes in electrode respiring bacteria by differential electrochemical mass spectrometry.

PubMed

Kubannek, F; Schröder, U; Krewer, U

2018-06-01

In this work we employ differential electrochemical mass spectrometry (DEMS) in combination with static and dynamic electrochemical techniques for the study of metabolic processes of electrochemically active bacteria. CO 2 production during acetate oxidation by electrode respiring bacteria was measured, in-vivo and online with a sensitivity of 6.5 ⋅ 10 -13 mol/s. The correlation of ion current and electrical current provides insight into the interaction of metabolic processes and extra-cellular electron transfer. In low-turnover CVs, two competing potential dependent electron transfer mechanisms were observed and formal potentials of two redox systems that are involved in complete oxidation of acetate to CO 2 were determined. By balancing charge and carbon flows during dynamic measurements, two significant storage mechanisms in electrochemically active bacteria were identified: 1) a charge storage mechanism that allows substrate oxidation to proceed at a constant rate despite of external current flowing in cathodic direction. 2) a carbon storage mechanism that allows the biofilm to take up acetate at an unchanged rate at very low potentials even though the oxidation to CO 2 stops. These storage capabilities allow a limited decoupling of electrical current and CO 2 production rate. Copyright © 2018 Elsevier B.V. All rights reserved.

On a new method for calculating the potential flow past a body of revolution

NASA Technical Reports Server (NTRS)

Kaplan, Carl

1943-01-01

A new method is presented for obtaining the velocity potential of the flow about a body of revolution moving uniformly in the direction of its axis of symmetry in a fluid otherwise at rest. This method is based essentially on the fact that the form of the differential equation for the velocity potential is invariant with regard to conformal transformation of the meridian plane. By means of the conformal transformation of the meridian profile into a circle a system of orthogonal curvilinear coordinates is obtained, the main feature of which is that one of the coordinate lines is the meridian profile itself. The use of this type of coordinate system yields a simple expression of the boundary condition at the surface of the solid and leads to a rational process of iteration for the solution of the differential equation for the velocity potential. It is shown that the velocity potential for an arbitrary body of revolution may be expressed in terms of universal functions which, although not normal, are obtainable by means of simple quadratures. The general results are applied to a body of revolution obtained by revolving a symmetrical Joukowski profile about its axis of symmetry. A numerical example further serves to illustrate the theory.

Experimental characterization of wingtip vortices in the near field using smoke flow visualizations

NASA Astrophysics Data System (ADS)

Serrano-Aguilera, J. J.; García-Ortiz, J. Hermenegildo; Gallardo-Claros, A.; Parras, L.; del Pino, C.

2016-08-01

In order to predict the axial development of the wingtip vortices strength, an accurate theoretical model is required. Several experimental techniques have been used to that end, e.g. PIV or hot-wire anemometry, but they imply a significant cost and effort. For this reason, we have performed experiments using the smoke-wire technique to visualize smoke streaks in six planes perpendicular to the main stream flow direction. Using this visualization technique, we obtained quantitative information regarding the vortex velocity field by means of Batchelor's model for two chord-based Reynolds numbers, Re_c=3.33× 10^4 and 10^5. Therefore, this theoretical vortex model has been introduced in the integration of ordinary differential equations which describe the temporal evolution of streak lines as function of two parameters: the swirl number, S, and the virtual axial origin, overline{z_0}. We have applied two different procedures to minimize the distance between experimental and theoretical flow patterns: individual curve fitting at six different control planes in the streamwise direction and the global curve fitting which corresponds to all the control planes simultaneously. Both sets of results have been compared with those provided by del Pino et al. (Phys Fluids 23(013):602, 2011b. doi: 10.1063/1.3537791), finding good agreement. Finally, we have observed a weak influence of the Reynolds number on the values S and overline{z_0} at low-to-moderate Re_c. This experimental technique is proposed as a low cost alternative to characterize wingtip vortices based on flow visualizations.

Tank depletion flow controller

DOEpatents

Georgeson, Melvin A.

1976-10-26

A flow control system includes two bubbler tubes installed at different levels within a tank containing such as radioactive liquid. As the tank is depleted, a differential pressure transmitter monitors pressure differences imparted by the two bubbler tubes at a remote, shielded location during uniform time intervals. At the end of each uniform interval, balance pots containing a dense liquid are valved together to equalize the pressures. The resulting sawtooth-shaped signal generated by the differential pressure transmitter is compared with a second sawtooth signal representing the desired flow rate during each time interval. Variations in the two signals are employed by a control instrument to regulate flow rate.

System and method for bidirectional flow and controlling fluid flow in a conduit

DOEpatents

Ortiz, Marcos German

1999-01-01

A system for measuring bidirectional flow, including backflow, of fluid in a conduit. The system utilizes a structural mechanism to create a pressure differential in the conduit. Pressure sensors are positioned upstream from the mechanism, at the mechanism, and downstream from the mechanism. Data from the pressure sensors are transmitted to a microprocessor or computer, and pressure differential detected between the pressure sensors is then used to calculate the backflow. Control signals may then be generated by the microprocessor or computer to shut off valves located in the conduit, upon the occurrence of backflow, or to control flow, total material dispersed, etc. in the conduit.

Overview of Sensitivity Analysis and Shape Optimization for Complex Aerodynamic Configurations

NASA Technical Reports Server (NTRS)

Newman, Perry A.; Newman, James C., III; Barnwell, Richard W.; Taylor, Arthur C., III; Hou, Gene J.-W.

1998-01-01

This paper presents a brief overview of some of the more recent advances in steady aerodynamic shape-design sensitivity analysis and optimization, based on advanced computational fluid dynamics. The focus here is on those methods particularly well- suited to the study of geometrically complex configurations and their potentially complex associated flow physics. When nonlinear state equations are considered in the optimization process, difficulties are found in the application of sensitivity analysis. Some techniques for circumventing such difficulties are currently being explored and are included here. Attention is directed to methods that utilize automatic differentiation to obtain aerodynamic sensitivity derivatives for both complex configurations and complex flow physics. Various examples of shape-design sensitivity analysis for unstructured-grid computational fluid dynamics algorithms are demonstrated for different formulations of the sensitivity equations. Finally, the use of advanced, unstructured-grid computational fluid dynamics in multidisciplinary analyses and multidisciplinary sensitivity analyses within future optimization processes is recommended and encouraged.

Heat Transfer in MHD Mixed Convection Flow of a Ferrofluid along a Vertical Channel.

PubMed

Gul, Aaiza; Khan, Ilyas; Shafie, Sharidan; Khalid, Asma; Khan, Arshad

2015-01-01

This study investigated heat transfer in magnetohydrodynamic (MHD) mixed convection flow of ferrofluid along a vertical channel. The channel with non-uniform wall temperatures was taken in a vertical direction with transverse magnetic field. Water with nanoparticles of magnetite (Fe3O4) was selected as a conventional base fluid. In addition, non-magnetic (Al2O3) aluminium oxide nanoparticles were also used. Comparison between magnetic and magnetite nanoparticles were also conducted. Fluid motion was originated due to buoyancy force together with applied pressure gradient. The problem was modelled in terms of partial differential equations with physical boundary conditions. Analytical solutions were obtained for velocity and temperature. Graphical results were plotted and discussed. It was found that temperature and velocity of ferrofluids depend strongly on viscosity and thermal conductivity together with magnetic field. The results of the present study when compared concurred with published work.

A simple dynamic subgrid-scale model for LES of particle-laden turbulence

NASA Astrophysics Data System (ADS)

Park, George Ilhwan; Bassenne, Maxime; Urzay, Javier; Moin, Parviz

2017-04-01

In this study, a dynamic model for large-eddy simulations is proposed in order to describe the motion of small inertial particles in turbulent flows. The model is simple, involves no significant computational overhead, contains no adjustable parameters, and is flexible enough to be deployed in any type of flow solvers and grids, including unstructured setups. The approach is based on the use of elliptic differential filters to model the subgrid-scale velocity. The only model parameter, which is related to the nominal filter width, is determined dynamically by imposing consistency constraints on the estimated subgrid energetics. The performance of the model is tested in large-eddy simulations of homogeneous-isotropic turbulence laden with particles, where improved agreement with direct numerical simulation results is observed in the dispersed-phase statistics, including particle acceleration, local carrier-phase velocity, and preferential-concentration metrics.

Heat Transfer in MHD Mixed Convection Flow of a Ferrofluid along a Vertical Channel

PubMed Central

Gul, Aaiza; Khan, Ilyas; Shafie, Sharidan; Khalid, Asma; Khan, Arshad

2015-01-01

This study investigated heat transfer in magnetohydrodynamic (MHD) mixed convection flow of ferrofluid along a vertical channel. The channel with non-uniform wall temperatures was taken in a vertical direction with transverse magnetic field. Water with nanoparticles of magnetite (Fe 3 O 4) was selected as a conventional base fluid. In addition, non-magnetic (Al 2 O 3) aluminium oxide nanoparticles were also used. Comparison between magnetic and magnetite nanoparticles were also conducted. Fluid motion was originated due to buoyancy force together with applied pressure gradient. The problem was modelled in terms of partial differential equations with physical boundary conditions. Analytical solutions were obtained for velocity and temperature. Graphical results were plotted and discussed. It was found that temperature and velocity of ferrofluids depend strongly on viscosity and thermal conductivity together with magnetic field. The results of the present study when compared concurred with published work. PMID:26550837

Application of a new multiphase multicomponent volcanic conduit model with magma degassing and crystallization to Stromboli volcano.

NASA Astrophysics Data System (ADS)

La Spina, Giuseppe; Burton, Mike; de'Michieli Vitturi, Mattia

2014-05-01

Volcanoes exhibit a wide range of eruption styles, from relatively slow effusive eruptions, generating lava flows and lava domes, to explosive eruptions, in which very large volumes of fragmented magma and volcanic gas are ejected high into the atmosphere. During an eruption, much information regarding the magma ascent dynamics can be gathered: melt and exsolved gas composition, crystal content, mass flow rate and ballistic velocities, to name just a few. Due to the lack of direct observations of the conduit itself, mathematical models for magma ascent provide invaluable tools for a better comprehension of the system. The complexity of the multiphase multicomponent gas-magma-solid system is reflected in the corresponding mathematical model; a set of non-linear hyperbolic partial differential and constitutive equations, which describe the physical system, has to be formulated and solved. The standard approach to derive governing equations for two-phase flow is based on averaging procedures, which leads to a system of governing equations in the form of mass, momentum and energy balance laws for each phase coupled with algebraic and differential source terms which represent phase interactions. For this work, we used the model presented by de' Michieli Vitturi et al. (EGU General Assembly Conference Abstracts, 2013), where a different approach based on the theory of thermodynamically compatible systems has been adopted to write the governing multiphase equations for two-phase compressible flow (with two velocities and two pressures) in the form of a conservative hyperbolic system of partial differential equations, coupled with non-differential source terms. Here, in order to better describe the multicomponent nature of the system, we extended the model adding several transport equations to the system for different crystal components and different gas species, and implementing appropriate equations of state. The constitutive equations of the model are chosen to reproduce both effusive and explosive eruptive activities at Stromboli volcano. Three different crystal components (olivine, pyroxene and feldspar) and two different gas species (water and carbon dioxide) are taken into account. The equilibrium profiles of crystallization as function of pressure, temperature and water content are modeled using the numerical codes AlphaMELTS and DAKOTA. The equilibrium of dissolved gas content, instead, is obtained using a non-linear fitting of data computed using VolatileCALC. With these data, we simulate numerically the lava effusion that occurred at Stromboli between 27 February and 2 April 2007, and find good agreement with the observed data (vesicularity, exsolved gas composition, crystal content and mass flow rate) at the vent. We find that the model is highly sensitive to input magma temperature, going from effusive to explosive eruption with temperature changes by just 20 °C. We thoroughly investigated through a sensitivity analysis the control of the temperature of magma chamber and of the radius of the conduit on the mass flow rate, obtaining also a set of admissible temperatures and conduit radii that produce results in agreement with the real observations.

Hybrid upwind discretization of nonlinear two-phase flow with gravity

NASA Astrophysics Data System (ADS)

Lee, S. H.; Efendiev, Y.; Tchelepi, H. A.

2015-08-01

Multiphase flow in porous media is described by coupled nonlinear mass conservation laws. For immiscible Darcy flow of multiple fluid phases, whereby capillary effects are negligible, the transport equations in the presence of viscous and buoyancy forces are highly nonlinear and hyperbolic. Numerical simulation of multiphase flow processes in heterogeneous formations requires the development of discretization and solution schemes that are able to handle the complex nonlinear dynamics, especially of the saturation evolution, in a reliable and computationally efficient manner. In reservoir simulation practice, single-point upwinding of the flux across an interface between two control volumes (cells) is performed for each fluid phase, whereby the upstream direction is based on the gradient of the phase-potential (pressure plus gravity head). This upwinding scheme, which we refer to as Phase-Potential Upwinding (PPU), is combined with implicit (backward-Euler) time discretization to obtain a Fully Implicit Method (FIM). Even though FIM suffers from numerical dispersion effects, it is widely used in practice. This is because of its unconditional stability and because it yields conservative, monotone numerical solutions. However, FIM is not unconditionally convergent. The convergence difficulties are particularly pronounced when the different immiscible fluid phases switch between co-current and counter-current states as a function of time, or (Newton) iteration. Whether the multiphase flow across an interface (between two control-volumes) is co-current, or counter-current, depends on the local balance between the viscous and buoyancy forces, and how the balance evolves in time. The sensitivity of PPU to small changes in the (local) pressure distribution exacerbates the problem. The common strategy to deal with these difficulties is to cut the timestep and try again. Here, we propose a Hybrid-Upwinding (HU) scheme for the phase fluxes, then HU is combined with implicit time discretization to yield a fully implicit method. In the HU scheme, the phase flux is divided into two parts based on the driving force. The viscous-driven and buoyancy-driven phase fluxes are upwinded differently. Specifically, the viscous flux, which is always co-current, is upwinded based on the direction of the total-velocity. The buoyancy-driven flux across an interface is always counter-current and is upwinded such that the heavier fluid goes downward and the lighter fluid goes upward. We analyze the properties of the Implicit Hybrid Upwinding (IHU) scheme. It is shown that IHU is locally conservative and produces monotone, physically-consistent numerical solutions. The IHU solutions show numerical diffusion levels that are slightly higher than those for standard FIM (i.e., implicit PPU). The primary advantage of the IHU scheme is that the numerical overall-flux of a fluid phase remains continuous and differentiable as the flow regime changes between co-current and counter-current conditions. This is in contrast to the standard phase-potential upwinding scheme, in which the overall fractional-flow (flux) function is non-differentiable across the boundary between co-current and counter-current flows.

Measuring flow velocity and flow direction by spatial and temporal analysis of flow fluctuations.

PubMed

Chagnaud, Boris P; Brücker, Christoph; Hofmann, Michael H; Bleckmann, Horst

2008-04-23

If exposed to bulk water flow, fish lateral line afferents respond only to flow fluctuations (AC) and not to the steady (DC) component of the flow. Consequently, a single lateral line afferent can encode neither bulk flow direction nor velocity. It is possible, however, for a fish to obtain bulk flow information using multiple afferents that respond only to flow fluctuations. We show by means of particle image velocimetry that, if a flow contains fluctuations, these fluctuations propagate with the flow. A cross-correlation of water motion measured at an upstream point with that at a downstream point can then provide information about flow velocity and flow direction. In this study, we recorded from pairs of primary lateral line afferents while a fish was exposed to either bulk water flow, or to the water motion caused by a moving object. We confirm that lateral line afferents responded to the flow fluctuations and not to the DC component of the flow, and that responses of many fiber pairs were highly correlated, if they were time-shifted to correct for gross flow velocity and gross flow direction. To prove that a cross-correlation mechanism can be used to retrieve the information about gross flow velocity and direction, we measured the flow-induced bending motions of two flexible micropillars separated in a downstream direction. A cross-correlation of the bending motions of these micropillars did indeed produce an accurate estimate of the velocity vector along the direction of the micropillars.

A Riparian Approach to Dendrochronological Flow Reconstruction, Yellowstone River, Montana

NASA Astrophysics Data System (ADS)

Schook, D. M.; Rathburn, S. L.; Friedman, J. M.

2015-12-01

Tree ring-based flow reconstructions can reveal river discharge variability over durations far exceeding the gauged record, building perspective for both the measured record and future flows. We use plains cottonwood (Populus deltoides subsp. monilifera) tree rings collected from four rivers to reconstruct flow history of the Yellowstone River near its confluence with the Missouri River. Upland trees in dry regions are typically used in flow reconstruction because their annual growth is controlled by the same precipitation that drives downstream flow, but our study improves flow reconstruction by including floodplain trees that are directly affected by the river. Cores from over 1000 cottonwoods along the Yellowstone, Powder, Little Missouri, and Redwater Rivers were collected from within a 170 km radius to reconstruct flows using the Age Curve Standardization technique in a multiple regression analysis. The large sample from trees spanning many age classes allows us to use only the rings that were produced when each tree was less than 50 years old and growth was most strongly correlated to river discharge. Using trees from a range of rivers improves our ability to differentiate between growth resulting from local precipitation and river flow, and we show that cottonwood growth differs across these neighboring rivers having different watersheds. Using the program Seascorr, tree growth is found to better correlated to seasonal river discharge (R = 0.69) than to local precipitation (R = 0.45). Our flow reconstruction reveals that the most extreme multi-year or multi-decade drought periods of the last 250 years on either the Yellowstone (1817-1821) or Powder (1846-1865) Rivers are missed by the gauged discharge record. Across all sites, we document increased growth in the 20th century compared to the 19th, a finding unattainable with conventional methods but having important implications for flow management.

Application of Phasor Measurement Units for Protection of Distribution Networks with High Penetration of Photovoltaic Sources

NASA Astrophysics Data System (ADS)

Meskin, Matin

The rate of the integration of distributed generation (DG) units to the distribution level to meet the growth in demand increases as a reasonable replacement for costly network expansion. This integration brings many advantages to the consumers and power grids, as well as giving rise to more challenges in relation to protection and control. Recent research has brought to light the negative effects of DG units on short circuit currents and overcurrent (OC) protection systems in distribution networks. Change in the direction of fault current flow, increment or decrement of fault current magnitude, blindness of protection, feeder sympathy trip, nuisance trip of interrupting devices, and the disruption of coordination between protective devices are some potential impacts of DG unit integration. Among other types of DG units, the integration of renewable energy resources into the electric grid has seen a vast improvement in recent years. In particular, the interconnection of photovoltaic (PV) sources to the medium voltage (MV) distribution networks has experienced a rapid increase in the last decade. In this work, the effect of PV source on conventional OC relays in MV distribution networks is shown. It is indicated that the PV output fluctuation, due to changes in solar radiation, causes the magnitude and direction of the current to change haphazardly. These variations may result in the poor operation of OC relays as the main protective devices in the MV distribution networks. In other words, due to the bi-directional power flow characteristic and the fluctuation of current magnitude occurring in the presence of PV sources, a specific setting of OC relays is difficult to realize. Therefore, OC relays may operate in normal conditions. To improve the OC relay operation, a voltage-dependent-overcurrent protection is proposed. Although, this new method prevents the OC relay from maloperation, its ability to detect earth faults and high impedance faults is poor. Thus, a comprehensive protective system is suggested at the end of the dissertation. The proposed method is based on the application of the phasor measurement unit (PMU) and the differential protection method. All of the current magnitudes and angles are collected by PMU and are sent to the phasor data concentrator (PDC), where a differential protection algorithm is applied to these data. If any fault is detected, the trip will be sent back to the corresponding circuit breakers across the network. Higher selectivity, sensitivity, and faster operation in the differential protection are superior to those of other protection schemes. Differential protection operates as unit protection, which means that it operates only when there is a fault in the protection zone. It does not function for faults occurring out of zone. Therefore, no coordination is required between differential protections across the power system. Moreover, the misoperation of this protective scheme is less likely as compared to other protection methods.

Small-scale collisions with big-scale effects: Direct numerical simulations of crystal interactions in dense suspensions and ramifications for magmatic differentiation

NASA Astrophysics Data System (ADS)

Sethian, J.; Suckale, J.; Yu, J.; Elkins-Tanton, L. T.

2011-12-01

Numerous problems in the Earth sciences involve the dynamic interaction between solid bodies and viscous flow. The goal of this contribution is to develop and validate a computational methodology for modeling complex solid-fluid interactions with minimal simplifying assumptions. The approach we develop is general enough to be applicable in a wide range of geophysical systems ranging from crystal-bearing lava flows to sediment-rich rivers and aerosol transport. Our algorithm relies on a two-step projection scheme: In the first step, we solve the multiple-phase Navier-Stokes or Stokes equation, respectively, in both domains. In the second step, we project the velocity field in the solid domain onto a rigid-body motion by enforcing that the deformation tensor in the respective domain is zero. An important component of the numerical scheme is the accurate treatment of collisions between an arbitrary number of suspended solid bodies based on the impact Stokes number and the elasticity parameters of the solid phase. We perform several benchmark computations to validate our computations including wake formation behind fixed and mobile cylinders and cuboids, the settling speed of particles, and laboratory experiments of collision modes. Finally, we apply our method to investigate the competing effect of entrainment and fractionation in crystalline suspensions - an important question in the context of magma differentiation processes in magma chambers and magma oceans. We find that the properties and volume fraction of the crystalline phase play an important role for evaluating differentiation efficiency.

The 2D dynamics of radiative zones of low-mass stars

NASA Astrophysics Data System (ADS)

Hypolite, D.; Mathis, S.; Rieutord, M.

2018-02-01

Context. Helioseismology and asteroseismology allow us to probe the differential rotation deep within low-mass stars. In the solar convective envelope, the rotation varies with latitude with an equator rotating faster than the pole, which results in a shear applied on the radiative zone below. However, a polar acceleration of the convective envelope can be obtained through 3D numerical simulations in other low-mass stars and the dynamical interaction of the surface convective envelope with the radiative core needs to be investigated in the general case. Aim. In the context of secular evolution, we aim to describe the dynamics of the radiative core of low-mass stars to get a deeper understanding of the internal transport of angular momentum in such stars, which results in a solid rotation in the Sun from 0.7R⊙ to 0.2R⊙ and a weak radial core-envelope differential rotation in solar-type stars. This study requires at least a 2D description to capture the latitudinal variations of the differential rotation. Methods: We build 2D numerical models of a radiative core on the top of which we impose a latitudinal shear so as to reproduce a conical or cylindrical differential rotation in a convective envelope. We perform a systematic study over the Rossby number ℛo = ΔΩ/2Ω0 measuring the latitudinal differential rotation at the radiative-convective interface. We provide a 2D description of the differential rotation and the associated meridional circulation in the incompressible and stably stratified cases using the Boussinesq approximation. Results: The imposed shear generates a geostrophic flow implying a cylindrical differential rotation in the case of an isotropic viscosity. When compared to the baroclinic flow that arises from the stable stratification, we find that the geostrophic flow is dominant when the Rossby number is high enough (ℛo ≥ 1) with a cylindrical rotation profile. For low Rossby numbers (ℛo < 1), the baroclinic solution dominates with a quasi-shellular rotation profile. Using scaling laws from 3D simulations, we show that slow rotators (Ω0 < 30Ω⊙) are expected to have a cylindrical rotation profile. Fast rotators (Ω0 > 30Ω⊙) may have a shellular profile at the beginning of the main sequence in stellar radiative zones. Conclusions: This study enables us to predict different types of differential rotation and emphasizes the need for a new generation of 2D rotating stellar models developed in synergy with 3D numerical simulations. The shear induced by a surface convective zone has a strong impact on the dynamics of the underlying radiative zone in low-mass stars. However, it cannot produce a flat internal rotation profile in a solar configuration calling for additional processes for the transport of angular momentum in both radial and latitudinal directions.

Characterizing the transplanar and in-plane water transport properties of fabrics under different sweat rate: Forced Flow Water Transport Tester

PubMed Central

Tang, K. P. M.; Chau, K. H.; Kan, C. W.; Fan, J. T.

2015-01-01

The water absorption and transport properties of fabrics are critical to wear comfort, especially for sportswear and protective clothing. A new testing apparatus, namely Forced Flow Water Transport Tester (FFWTT), was developed for characterizing the transplanar and in-plane wicking properties of fabrics based on gravimetric and image analysis technique. The uniqueness of this instrument is that the rate of water supply is adjustable to simulate varying sweat rates with reference to the specific end-use conditions ranging from sitting, walking, running to other strenuous activities. This instrument is versatile in terms of the types of fabrics that can be tested. Twenty four types of fabrics with varying constructions and surface finishes were tested. The results showed that FFWTT was highly sensitive and reproducible in differentiating these fabrics and it suggests that water absorption and transport properties of fabrics are sweat rate-dependent. Additionally, two graphic methods were proposed to map the direction of liquid transport and its relation to skin wetness, which provides easy and direct comparison among different fabrics. Correlation analysis showed that FFWTT results have strong correlation with subjective wetness sensation, implying validity and usefulness of the instrument. PMID:26593699

Bdellovibrio bacteriovorus directly attacks Pseudomonas aeruginosa and Staphylococcus aureus Cystic fibrosis isolates.

PubMed

Iebba, Valerio; Totino, Valentina; Santangelo, Floriana; Gagliardi, Antonella; Ciotoli, Luana; Virga, Alessandra; Ambrosi, Cecilia; Pompili, Monica; De Biase, Riccardo V; Selan, Laura; Artini, Marco; Pantanella, Fabrizio; Mura, Francesco; Passariello, Claudio; Nicoletti, Mauro; Nencioni, Lucia; Trancassini, Maria; Quattrucci, Serena; Schippa, Serena

2014-01-01

Bdellovibrio bacteriovorus is a predator bacterial species found in the environment and within the human gut, able to attack Gram-negative prey. Cystic fibrosis (CF) is a genetic disease which usually presents lung colonization by Pseudomonas aeruginosa or Staphylococcus aureus biofilms. Here, we investigated the predatory behavior of B. bacteriovorus against these two pathogenic species with: (1) broth culture; (2) "static" biofilms; (3) field emission scanning electron microscope (FESEM); (4) "flow" biofilms; (5) zymographic technique. We had the first evidence of B. bacteriovorus survival with a Gram-positive prey, revealing a direct cell-to-cell contact with S. aureus and a new "epibiotic" foraging strategy imaged with FESEM. Mean attaching time of HD100 to S. aureus cells was 185 s, while "static" and "flow" S. aureus biofilms were reduced by 74 (at 24 h) and 46% (at 20 h), respectively. Furthermore, zymograms showed a differential bacteriolytic activity exerted by the B. bacteriovorus lysates on P. aeruginosa and S. aureus. The dual foraging system against Gram-negative (periplasmic) and Gram-positive (epibiotic) prey could suggest the use of B. bacteriovorus as a "living antibiotic" in CF, even if further studies are required to simulate its in vivo predatory behavior.

Characterizing the transplanar and in-plane water transport properties of fabrics under different sweat rate: Forced Flow Water Transport Tester

NASA Astrophysics Data System (ADS)

Tang, K. P. M.; Chau, K. H.; Kan, C. W.; Fan, J. T.

2015-11-01

The water absorption and transport properties of fabrics are critical to wear comfort, especially for sportswear and protective clothing. A new testing apparatus, namely Forced Flow Water Transport Tester (FFWTT), was developed for characterizing the transplanar and in-plane wicking properties of fabrics based on gravimetric and image analysis technique. The uniqueness of this instrument is that the rate of water supply is adjustable to simulate varying sweat rates with reference to the specific end-use conditions ranging from sitting, walking, running to other strenuous activities. This instrument is versatile in terms of the types of fabrics that can be tested. Twenty four types of fabrics with varying constructions and surface finishes were tested. The results showed that FFWTT was highly sensitive and reproducible in differentiating these fabrics and it suggests that water absorption and transport properties of fabrics are sweat rate-dependent. Additionally, two graphic methods were proposed to map the direction of liquid transport and its relation to skin wetness, which provides easy and direct comparison among different fabrics. Correlation analysis showed that FFWTT results have strong correlation with subjective wetness sensation, implying validity and usefulness of the instrument.

pCO2 and pH regulation of cerebral blood flow

PubMed Central

Yoon, SeongHun; Zuccarello, Mario; Rapoport, Robert M.

2012-01-01

CO2 serves as one of the fundamental regulators of cerebral blood flow (CBF). It is widely considered that this regulation occurs through pCO2-driven changes in pH of the cerebral spinal fluid (CSF), with elevated and lowered pH causing direct relaxation and contraction of the smooth muscle, respectively. However, some findings also suggest that pCO2 acts independently of and/or in conjunction with altered pH. This action may be due to a direct effect of CSF pCO2 on the smooth muscle as well as on the endothelium, nerves, and astrocytes. Findings may also point to an action of arterial pCO2 on the endothelium to regulate smooth muscle contractility. Thus, the effects of pH and pCO2 may be influenced by the absence/presence of different cell types in the various experimental preparations. Results may also be influenced by experimental parameters including myogenic tone as well as solutions containing significantly altered HCO3− concentrations, i.e., solutions routinely employed to differentiate the effects of pH from pCO2. In sum, it appears that pCO2, independently and in conjunction with pH, may regulate CBF. PMID:23049512

Characterizing the transplanar and in-plane water transport properties of fabrics under different sweat rate: Forced Flow Water Transport Tester.

PubMed

Tang, K P M; Chau, K H; Kan, C W; Fan, J T

2015-11-23

The water absorption and transport properties of fabrics are critical to wear comfort, especially for sportswear and protective clothing. A new testing apparatus, namely Forced Flow Water Transport Tester (FFWTT), was developed for characterizing the transplanar and in-plane wicking properties of fabrics based on gravimetric and image analysis technique. The uniqueness of this instrument is that the rate of water supply is adjustable to simulate varying sweat rates with reference to the specific end-use conditions ranging from sitting, walking, running to other strenuous activities. This instrument is versatile in terms of the types of fabrics that can be tested. Twenty four types of fabrics with varying constructions and surface finishes were tested. The results showed that FFWTT was highly sensitive and reproducible in differentiating these fabrics and it suggests that water absorption and transport properties of fabrics are sweat rate-dependent. Additionally, two graphic methods were proposed to map the direction of liquid transport and its relation to skin wetness, which provides easy and direct comparison among different fabrics. Correlation analysis showed that FFWTT results have strong correlation with subjective wetness sensation, implying validity and usefulness of the instrument.

Differentiation of the four major types (C. Burmannii, C. Verum, C. cassia, And C. Loureiroi) of cinnamons using a flow-injection mass spectrometric (FIMS) fingerprinting method

USDA-ARS?s Scientific Manuscript database

A simple and efficient flow-injection mass spectrometric (FIMS) method was developed to differentiate cinnamon (Cinnamomum) bark (CB) samples of the four major species (C. burmannii, C. verum, C. aromaticum, and C. loureiroi) of cinnamon. Fifty cinnamon samples collected from China, Vietnam, Indon...

Differentiation of debris-flow and flash-flood deposits: implications for paleoflood investigations

USGS Publications Warehouse

Waythomas, Christopher F.; Jarrett, Robert D.; ,

1993-01-01

Debris flows and flash floods are common geomorphic processes in the Colorado Rocky Mountain Front Range and foothills. Usually, debris flows and flash floods are associated with excess summer rainfall or snowmelt, in areas were unconsolidated surficial deposits are relatively thick and slopes are steep. In the Front Range and foothills, flash flooding is limited to areas below about 2300m whereas, debris flow activity is common throughout the foothill and alpine zones and is not necessarily elevation limited. Because flash floods and debris flows transport large quantities of bouldery sediment, the resulting deposits appear somewhat similar even though such deposits were produced by different processes. Discharge estimates based on debris-flow deposits interpreted as flash-flood deposits have large errors because techniques for discharge retrodiction were developed for water floods with negligible sediment concentrations. Criteria for differentiating between debris-flow and flash-flood deposits are most useful for deposits that are fresh and well-exposed. However, with the passage of time, both debris-flow and flash-flood deposits become modified by the combined effects of weathering, colluviation, changes in surface morphology, and in some instances removal of interstitial sediment. As a result, some of the physical characteristics of the deposits become more alike. Criteria especially applicable to older deposits are needed. We differentiate flash-flood from debris-flow and other deposits using clast fabric measurements and other morphologic and sedimentologic techniques (e.g., deposit morphology, clast lithology, particle size and shape, geomorphic setting).

Dynamics of magnetic flux tubes in an advective flow around a black hole

NASA Astrophysics Data System (ADS)

Deb, Arnab; Giri, Kinsuk; Chakrabarti, Sandip K.

2017-12-01

Entangled magnetic fields entering into an accretion flow would very soon be stretched into a dominant toroidal component due to strong differentially rotating motion inside the accretion disc. This is particularly true for weakly viscous, low angular momentum transonic or advective discs. We study the trajectories of toroidal flux tubes inside a geometrically thick flow that undergoes a centrifugal force supported shock. We also study effects of these flux tubes on the dynamics of the inflow and the outflow. We use a finite difference method (total variation diminishing) for this purpose and specifically focused on whether these flux tubes significantly affect the properties of the outflows such as its collimation and the rate. It is seen that depending upon the cross-sectional radius of the flux tubes that control the drag force, these field lines may move towards the central object or oscillate vertically before eventually escaping out of the funnel wall (pressure zero surfaces) along the vertical direction. A comparison of results obtained with and without flux tubes show these flux tubes could play a pivotal role in collimation and acceleration of jets and outflows.

Asymptotic theory of neutral stability of the Couette flow of a vibrationally excited gas

NASA Astrophysics Data System (ADS)

Grigor'ev, Yu. N.; Ershov, I. V.

2017-01-01

An asymptotic theory of the neutral stability curve for a supersonic plane Couette flow of a vibrationally excited gas is developed. The initial mathematical model consists of equations of two-temperature viscous gas dynamics, which are used to derive a spectral problem for a linear system of eighth-order ordinary differential equations within the framework of the classical linear stability theory. Unified transformations of the system for all shear flows are performed in accordance with the classical Lin scheme. The problem is reduced to an algebraic secular equation with separation into the "inviscid" and "viscous" parts, which is solved numerically. It is shown that the thus-calculated neutral stability curves agree well with the previously obtained results of the direct numerical solution of the original spectral problem. In particular, the critical Reynolds number increases with excitation enhancement, and the neutral stability curve is shifted toward the domain of higher wave numbers. This is also confirmed by means of solving an asymptotic equation for the critical Reynolds number at the Mach number M ≤ 4.

Numerical study focusing on the entropy analysis of MHD squeezing flow of a nanofluid model using Cattaneo–Christov theory

NASA Astrophysics Data System (ADS)

Akmal, N.; Sagheer, M.; Hussain, S.

2018-05-01

The present study gives an account of the heat transfer characteristics of the squeezing flow of a nanofluid between two flat plates with upper plate moving vertically and the lower in the horizontal direction. Tiwari and Das nanofluid model has been utilized to give a comparative analysis of the heat transfer in the Cu-water and Al2O3-water nanofluids with entropy generation. The modeling is carried out with the consideration of Lorentz forces to observe the effect of magnetic field on the flow. The Joule heating effect is included to discuss the heat dissipation in the fluid and its effect on the entropy of the system. The nondimensional ordinary differential equations are solved using the Keller box method to assess the numerical results which are presented by the graphs and tables. An interesting observation is that the entropy is generated more near the lower plate as compared with that at the upper plate. Also, the heat transfer rate is found to be higher for the Cu nanoparticles in comparison with the Al2O3 nanoparticles.

Uncertainty Quantification in Scale-Dependent Models of Flow in Porous Media: SCALE-DEPENDENT UQ

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tartakovsky, A. M.; Panzeri, M.; Tartakovsky, G. D.

Equations governing flow and transport in heterogeneous porous media are scale-dependent. We demonstrate that it is possible to identify a support scalemore » $$\\eta^*$$, such that the typically employed approximate formulations of Moment Equations (ME) yield accurate (statistical) moments of a target environmental state variable. Under these circumstances, the ME approach can be used as an alternative to the Monte Carlo (MC) method for Uncertainty Quantification in diverse fields of Earth and environmental sciences. MEs are directly satisfied by the leading moments of the quantities of interest and are defined on the same support scale as the governing stochastic partial differential equations (PDEs). Computable approximations of the otherwise exact MEs can be obtained through perturbation expansion of moments of the state variables in orders of the standard deviation of the random model parameters. As such, their convergence is guaranteed only for the standard deviation smaller than one. We demonstrate our approach in the context of steady-state groundwater flow in a porous medium with a spatially random hydraulic conductivity.« less

TRPV4 channels: physiological and pathological role in cardiovascular system.

PubMed

Randhawa, Puneet Kaur; Jaggi, Amteshwar Singh

2015-11-01

TRPV4 channels are non-selective cation channels permeable to Ca(2+), Na(+), and Mg(2+) ions. Recently, TRPV4 channels have received considerable attention as these channels are widely expressed in the cardiovascular system including endothelial cells, cardiac fibroblasts, vascular smooth muscles, and peri-vascular nerves. Therefore, these channels possibly play a pivotal role in the maintenance of cardiovascular homeostasis. TRPV4 channels critically regulate flow-induced arteriogenesis, TGF-β1-induced differentiation of cardiac fibroblasts into myofibroblasts, and heart failure-induced pulmonary edema. These channels also mediate hypoxia-induced increase in proliferation and migration of pulmonary artery smooth muscle cells and progression of pulmonary hypertension. These channels also maintain flow-induced vasodilation and preserve vascular function by directly activating Ca(2+)-dependent KCa channels. Furthermore, these may also induce vasodilation and maintain blood pressure indirectly by evoking the release of NO, CGRP, and substance P. The present review discusses the evidences and the potential mechanisms implicated in diverse responses including arteriogenesis, cardiac remodeling, congestive heart failure-induced pulmonary edema, pulmonary hypertension, flow-induced dilation, regulation of blood pressure, and hypoxic preconditioning.

A simple, analytic 3-dimensional downburst model based on boundary layer stagnation flow

NASA Technical Reports Server (NTRS)

Oseguera, Rosa M.; Bowles, Roland L.

1988-01-01

A simple downburst model is developed for use in batch and real-time piloted simulation studies of guidance strategies for terminal area transport aircraft operations in wind shear conditions. The model represents an axisymmetric stagnation point flow, based on velocity profiles from the Terminal Area Simulation System (TASS) model developed by Proctor and satisfies the mass continuity equation in cylindrical coordinates. Altitude dependence, including boundary layer effects near the ground, closely matches real-world measurements, as do the increase, peak, and decay of outflow and downflow with increasing distance from the downburst center. Equations for horizontal and vertical winds were derived, and found to be infinitely differentiable, with no singular points existent in the flow field. In addition, a simple relationship exists among the ratio of maximum horizontal to vertical velocities, the downdraft radius, depth of outflow, and altitude of maximum outflow. In use, a microburst can be modeled by specifying four characteristic parameters, velocity components in the x, y and z directions, and the corresponding nine partial derivatives are obtained easily from the velocity equations.

Cardiovascular function, compliance, and connective tissue remodeling in the turtle, Trachemys scripta, following thermal acclimation

PubMed Central

Keen, Adam N.; Crossley, Dane A.

2016-01-01

Low temperature directly alters cardiovascular physiology in freshwater turtles, causing bradycardia, arterial hypotension, and a reduction in systemic blood pressure. At the same time, blood viscosity and systemic resistance increase, as does sensitivity to cardiac preload (e.g., via the Frank-Starling response). However, the long-term effects of these seasonal responses on the cardiovascular system are unclear. We acclimated red-eared slider turtles to a control temperature (25°C) or to chronic cold (5°C). To differentiate the direct effects of temperature from a cold-induced remodeling response, all measurements were conducted at the control temperature (25°C). In anesthetized turtles, cold acclimation reduced systemic resistance by 1.8-fold and increased systemic blood flow by 1.4-fold, resulting in a 2.3-fold higher right to left (R-L; net systemic) cardiac shunt flow and a 1.8-fold greater shunt fraction. Following a volume load by bolus injection of saline (calculated to increase stroke volume by 5-fold, ∼2.2% of total blood volume), systemic resistance was reduced while pulmonary blood flow and systemic pressure increased. An increased systemic blood flow meant the R-L cardiac shunt was further pronounced. In the isolated ventricle, passive stiffness was increased following cold acclimation with 4.2-fold greater collagen deposition in the myocardium. Histological sections of the major outflow arteries revealed a 1.4-fold higher elastin content in cold-acclimated animals. These results suggest that cold acclimation alters cardiac shunting patterns with an increased R-L shunt flow, achieved through reducing systemic resistance and increasing systemic blood flow. Furthermore, our data suggests that cold-induced cardiac remodeling may reduce the stress of high cardiac preload by increasing compliance of the vasculature and decreasing compliance of the ventricle. Together, these responses could compensate for reduced systolic function at low temperatures in the slider turtle. PMID:27101300

RAXBOD- INVISCID TRANSONIC FLOW OVER AXISYMMETRIC BODIES

NASA Technical Reports Server (NTRS)

Keller, J. D.

1994-01-01

The problem of axisymmetric transonic flow is of interest not only because of the practical application to missile and launch vehicle aerodynamics, but also because of its relation to fully three-dimensional flow in terms of the area rule. The RAXBOD computer program was developed for the analysis of steady, inviscid, irrotational, transonic flow over axisymmetric bodies in free air. RAXBOD uses a finite-difference relaxation method to numerically solve the exact formulation of the disturbance velocity potential with exact surface boundary conditions. Agreement with available experimental results has been good in cases where viscous effects and wind-tunnel wall interference are not important. The governing second-order partial differential equation describing the flow potential is replaced by a system of finite difference equations, including Jameson's "rotated" difference scheme at supersonic points. A stretching is applied to both the normal and tangential coordinates such that the infinite physical space is mapped onto a finite computational space. The boundary condition at infinity can be applied directly and there is no need for an asymptotic far-field solution. The system of finite difference equations is solved by a column relaxation method. In order to obtain both rapid convergence and any desired resolution, the relaxation is performed iteratively on successively refined grids. Input to RAXBOD consists of a description of the body geometry, the free stream conditions, and the desired resolution control parameters. Output from RAXBOD includes computed geometric parameters in the normal and tangential directions, iteration history information, drag coefficients, flow field data in the computational plane, and coordinates of the sonic line. This program is written in FORTRAN IV for batch execution and has been implemented on a CDC 6600 computer with an overlayed central memory requirement of approximately 40K (octal) of 60 bit words. Optional plotted output can be generated for the Calcomp plotting system. The RAXBOD program was developed in 1976.

Solar receiver protection means and method for loss of coolant flow

DOEpatents

Glasgow, Lyle E.

1983-01-01

An apparatus and method for preventing a solar receiver (12) utilizing a flowing coolant liquid for removing heat energy therefrom from overheating after a loss of coolant flow. Solar energy is directed to the solar receiver (12) by a plurality of reflectors (16) which rotate so that they direct solar energy to the receiver (12) as the earth rotates. The apparatus disclosed includes a first storage tank (30) for containing a first predetermined volume of the coolant and a first predetermined volume of gas at a first predetermined pressure. The first storage tank (30) includes an inlet and outlet through which the coolant can enter and exit. The apparatus also includes a second storage tank (34) for containing a second predetermined volume of the coolant and a second predetermined volume of the gas at a second predetermined pressure, the second storage tank (34) having an inlet through which the coolant can enter. The first and second storage tanks (30) and (34) are in fluid communication with each other through the solar receiver (12). The first and second predetermined coolant volumes, the first and second gas volumes, and the first and second predetermined pressures are chosen so that a predetermined volume of the coolant liquid at a predetermined rate profile will flow from the first storage tank (30) through the solar receiver (12) and into the second storage tank (34). Thus, in the event of a power failure so that coolant flow ceases and the solar reflectors (16) stop rotating, a flow rate maintained by the pressure differential between the first and second storage tanks (30) and (34) will be sufficient to maintain the coolant in the receiver (12) below a predetermined upper temperature until the solar reflectors (16) become defocused with respect to the solar receiver (12) due to the earth's rotation.

Partial slip effect in the flow of MHD micropolar nanofluid flow due to a rotating disk - A numerical approach

NASA Astrophysics Data System (ADS)

Ramzan, Muhammad; Chung, Jae Dong; Ullah, Naeem

The aim of present exploration is to study the flow of micropolar nanofluid due to a rotating disk in the presence of magnetic field and partial slip condition. The governing coupled partial differential equations are reduced to nonlinear ordinary differential equations using appropriate transformations. The differential equations are solved numerically by using Maple dsolve command with option numeric which utilize Runge-Kutta fourth-fifth order Fehlberg technique. A comparison to previous study is also added to validate the present results. Moreover, behavior of different parameters on velocity, microrotation, temperature and concentration of nanofluid are presented via graphs and tables. It is noted that the slip effect and magnetic field decay the velocity and microrotation or spin component.

Differentiation of Aurantii Fructus Immaturus from Poniciri Trifoliatae Fructus Immaturus using Flow- injection Mass spectrometric (FIMS) Metabolic Fingerprinting Method Combined with Chemometrics

PubMed Central

Zhao, Yang; Chang, Yuan-Shiun; Chen, Pei

2015-01-01

A flow-injection mass spectrometric metabolic fingerprinting method in combination with chemometrics was used to differentiate Aurantii Fructus Immaturus from its counterfeit Poniciri Trifoliatae Fructus Immaturus. Flow-injection mass spectrometric (FIMS) fingerprints of 9 Aurantii Fructus Immaturus samples and 12 Poniciri Trifoliatae Fructus Immaturus samples were acquired and analyzed using principal component analysis (PCA) and soft independent modeling of class analogy (SIMCA). The authentic herbs were differentiated from their counterfeits easily. Eight characteristic components which were responsible for the difference between the samples were tentatively identified. Furthermore, three out of the eight components, naringin, hesperidin, and neohesperidin, were quantified. The results are useful to help identify the authenticity of Aurantii Fructus Immaturus. PMID:25622204

Flow direction measurement criteria and techniques planned for the 40- by 80-/80- x 120-foot wind tunnel integrated systems tests

NASA Technical Reports Server (NTRS)

Zell, P. T.; Hoffmann, J.; Sandlin, D. R.

1985-01-01

A study was performed in order to develop the criteria for the selection of flow direction indicators for use in the Integrated Systems Tests (ISTs) of the 40 by 80/80 by 120 Foot Wind Tunnel System. The problems, requirements, and limitations of flow direction measurement in the wind tunnel were investigated. The locations and types of flow direction measurements planned in the facility were discussed. A review of current methods of flow direction measurement was made and the most suitable technique for each location was chosen. A flow direction vane for each location was chosen. A flow direction vane that employs a Hall Effect Transducer was then developed and evaluated for application during the ISTs.

Microfluidic device to control interstitial flow-mediated homotypic and heterotypic cellular communication.

PubMed

Alonzo, Luis F; Moya, Monica L; Shirure, Venktesh S; George, Steven C

2015-09-07

Tissue engineering can potentially recreate in vivo cellular microenvironments in vitro for an array of applications such as biological inquiry and drug discovery. However, the majority of current in vitro systems still neglect many biological, chemical, and mechanical cues that are known to impact cellular functions such as proliferation, migration, and differentiation. To address this gap, we have developed a novel microfluidic device that precisely controls the spatial and temporal interactions between adjacent three-dimensional cellular environments. The device consists of four interconnected microtissue compartments (~0.1 mm(3)) arranged in a square. The top and bottom pairs of compartments can be sequentially loaded with discrete cellularized hydrogels creating the opportunity to investigate homotypic (left to right or x-direction) and heterotypic (top to bottom or y-direction) cell-cell communication. A controlled hydrostatic pressure difference across the tissue compartments in both x and y direction induces interstitial flow and modulates communication via soluble factors. To validate the biological significance of this novel platform, we examined the role of stromal cells in the process of vasculogenesis. Our device confirms previous observations that soluble mediators derived from normal human lung fibroblasts (NHLFs) are necessary to form a vascular network derived from endothelial colony forming cell-derived endothelial cells (ECFC-ECs). We conclude that this platform could be used to study important physiological and pathological processes that rely on homotypic and heterotypic cell-cell communication.

Concomitant differentiation of a population of mouse embryonic stem cells into neuron-like cells and Schwann cell-like cells in a slow-flow microfluidic device

PubMed Central

Ramamurthy, Poornapriya; White, Joshua B.; Park, Joong Yull; Hume, Richard I.; Ebisu, Fumi; Mendez, Flor; Takayama, Shuichi; Barald, Kate F

2016-01-01

Background To send meaningful information to the brain, an inner ear cochlear implant (CI) must become closely coupled to as large and healthy a population of remaining Spiral Ganglion Neurons (SGN) as possible. Inner ear gangliogenesis depends on macrophage migration inhibitory factor (MIF), a directionally attractant neurotrophic cytokine made by both Schwann and supporting cells (Bank et al., 2012). MIF-induced mouse embryonic stem cell (mESC)-derived “neurons” could potentially substitute for lost or damaged SGN. mESC-derived “Schwann cells” produce MIF as do all Schwann cells (Huang et al., 2002; Roth et al., 2007, 2008) and could attract SGN to “ cell coated” implant. Results Neuron- and Schwann cell-like cells were produced from a common population of mESC in an ultra-slow flow microfluidic device. As the populations interacted; “neurons” grew over the “Schwann cell” lawn and early events in myelination were documented. Blocking MIF on the Schwann cell side greatly reduced directional neurite outgrowth. MIF-expressing “Schwann cells” were used to “coat” a CI: mouse SGN and MIF-induced “neurons” grew directionally to the CI and to a wild type but not MIF-knock out Organ of Corti explant. Conclusions Two novel stem cell-based approaches for treating the problem of sensorineural hearing loss are described. PMID:27761977

Pleistocene land bridges act as semipermeable agents of avian gene flow in Wallacea.

PubMed

Garg, Kritika M; Chattopadhyay, Balaji; Wilton, Peter R; Malia Prawiradilaga, Dewi; Rheindt, Frank E

2018-08-01

Cyclical periods of global cooling have been important drivers of biotic differentiation throughout the Quaternary. Ice age-induced sea level fluctuations can lead to changing patterns of land connections, both facilitating and disrupting gene flow. In this study, we test if species with differing life histories are differentially affected by Quaternary land connections. We used genome-wide SNPs in combination with mitochondrial gene sequences to analyse levels of divergence and gene flow between two songbird complexes across two Wallacean islands that have been repeatedly connected during glaciations. Although the two bird complexes are similar in ecological attributes, the forest and edge-inhabiting golden whistler Pachycephala pectoralis is comparatively flexible in its diet and niche requirements as compared to the henna-tailed jungle-flycatcher Cyornis colonus, which is largely restricted to the forest interior. Using population-genomic and coalescent approaches, we estimated levels of gene flow, population differentiation and divergence time between the two island populations. We observed higher levels of differentiation, an approximately two to four times deeper divergence time and near-zero levels of gene flow between the two island populations of the more forest-dependent henna-tailed jungle-flycatcher as compared to the more generalist golden whistler. Our results suggest that Quaternary land bridges act as semipermeable agents of gene flow in Wallacea, allowing only certain taxa to connect between islands while others remain isolated. Quaternary land bridges do not accommodate all terrestrial species equally, differing in suitability according to life history and species biology. More generalist species are likely to use Quaternary land connections as a conduit for gene flow between islands whereas island populations of more specialist species may continue to be reproductively isolated even during periods of Quaternary land bridges. Copyright © 2018 Elsevier Inc. All rights reserved.

Influence of large-scale zonal flows on the evolution of stellar and planetary magnetic fields

NASA Astrophysics Data System (ADS)

Petitdemange, Ludovic; Schrinner, Martin; Dormy, Emmanuel; ENS Collaboration

2011-10-01

Zonal flows and magnetic field are present in various objects as accretion discs, stars and planets. Observations show a huge variety of stellar and planetary magnetic fields. Of particular interest is the understanding of cyclic field variations, as known from the sun. They are often explained by an important Ω-effect, i.e., by the stretching of field lines because of strong differential rotation. We computed the dynamo coefficients for an oscillatory dynamo model with the help of the test-field method. We argue that this model is of α2 Ω -type and here the Ω-effect alone is not responsible for its cyclic time variation. More general conditions which lead to dynamo waves in global direct numerical simulations are presented. Zonal flows driven by convection in planetary interiors may lead to secondary instabilities. We showed that a simple, modified version of the MagnetoRotational Instability, i.e., the MS-MRI can develop in planteray interiors. The weak shear yields an instability by its constructive interaction with the much larger rotation rate of planets. We present results from 3D simulations and show that 3D MS-MRI modes can generate wave pattern at the surface of the spherical numerical domain. Zonal flows and magnetic field are present in various objects as accretion discs, stars and planets. Observations show a huge variety of stellar and planetary magnetic fields. Of particular interest is the understanding of cyclic field variations, as known from the sun. They are often explained by an important Ω-effect, i.e., by the stretching of field lines because of strong differential rotation. We computed the dynamo coefficients for an oscillatory dynamo model with the help of the test-field method. We argue that this model is of α2 Ω -type and here the Ω-effect alone is not responsible for its cyclic time variation. More general conditions which lead to dynamo waves in global direct numerical simulations are presented. Zonal flows driven by convection in planetary interiors may lead to secondary instabilities. We showed that a simple, modified version of the MagnetoRotational Instability, i.e., the MS-MRI can develop in planteray interiors. The weak shear yields an instability by its constructive interaction with the much larger rotation rate of planets. We present results from 3D simulations and show that 3D MS-MRI modes can generate wave pattern at the surface of the spherical numerical domain. The first author thanks DFG and PlanetMag project for financial support.

Role of adipose tissue derived stem cells differentiated into insulin producing cells in the treatment of type I diabetes mellitus.

PubMed

Amer, Mona G; Embaby, Azza S; Karam, Rehab A; Amer, Marwa G

2018-05-15

Generation of new β cells is an important approach in the treatment of type 1 diabetes mellitus (type 1 DM). Adipose tissue-derived stem cells (ADSCs) might be one of the best sources for cell replacement therapy for diabetes. Therefore, this work aimed to test the possible role of transplanted insulin-producing cells (IPCs) differentiated from ADSCs in treatment of streptozotocin (STZ) induced type I DM in rats. Type 1 DM was induced by single intra peritoneal injection with STZ (50 mg/kg BW). Half of the diabetic rats were left without treatment and the other half were injected with differentiated IPCs directly into the pancreas. ADSCs were harvested, cultured and identified by testing their phenotypes through flow cytometry. They were further subjected to differentiation into IPCs using differentiation medium. mRNA expression of pancreatic transcription factors (pdx1), insulin and glucose transporter-2 genes by real time PCR was done to detect the cellular differentiation and confirmed by stimulated insulin secretion. The pancreatic tissues from all groups were examined 2 months after IPC transplantation and were subjected to histological, Immunohistochemical and morphometric study. The differentiated IPCs showed significant expression of pancreatic β cell markers and insulin secretion in glucose dependent manner. Treatment with IPCs induced apparent regeneration, diffused proliferated islet cells and significant increase in C-peptide immune reaction. We concluded that transplantation of differentiated IPCs improved function and morphology of Islet cells in diabetic rats. Consequently, this therapy option may be a promising therapeutic approach to patient with type 1 DM if proven to be effective and safe. Copyright © 2018 Elsevier B.V. All rights reserved.

A New Differential Pressure Flow Meter for Measurement of Human Breath Flow: Simulation and Experimental Investigation

PubMed Central

Bridgeman, Devon; Tsow, Francis; Xian, Xiaojun; Forzani, Erica

2016-01-01

The development and performance characterization of a new differential pressure-based flow meter for human breath measurements is presented in this article. The device, called a “Confined Pitot Tube,” is comprised of a pipe with an elliptically shaped expansion cavity located in the pipe center, and an elliptical disk inside the expansion cavity. The elliptical disk, named Pitot Tube, is exchangeable, and has different diameters, which are smaller than the diameter of the elliptical cavity. The gap between the disk and the cavity allows the flow of human breath to pass through. The disk causes an obstruction in the flow inside the pipe, but the elliptical cavity provides an expansion for the flow to circulate around the disk, decreasing the overall flow resistance. We characterize the new sensor flow experimentally and theoretically, using Comsol Multiphysics® software with laminar and turbulent models. We also validate the sensor, using inhalation and exhalation tests and a reference method. PMID:27818521

Eye wash water flow direction study: an evaluation of the effectiveness of eye wash devices with opposite directional water flow.

PubMed

Fogt, Jennifer S; Jones-Jordan, Lisa A; Barr, Joseph T

2018-01-01

New designs of eye wash stations have been developed in which the direction of water flow from the fountain has been reversed, with two water streams originating nasally in both eyes and flowing toward the temporal side of each eye. No study has been done to determine the ideal direction of water flow coming from the eye wash in relation to the eye. Ophthalmic eye examinations were conducted before and after the use of two eye wash stations with opposite water flow directionality. Fluorescein was instilled in both eyes before using an eye wash to measure the effectiveness of the water flow. Subjects were surveyed upon their experiences using the eye washes. Ophthalmic examination found no significant difference in the efficacy of the eye washes with nasal-to-temporal water flow when compared to temporal-to-nasal water flow direction.

Pneumatic Proboscis Heat-Flow Probe

NASA Technical Reports Server (NTRS)

Zacny, Kris; Hedlund, Magnus; Mumm, Eric; Shasho, Jeffrey; Chu, Philip; Kumar, Nishant

2013-01-01

Heat flow is a fundamental property of a planet, and provides significant constraints on the abundance of radiogenic isotopes, the thermal evolution and differentiation history, and the mechanical properties of the lithosphere. Heat-flow measurements are also essential in achieving at least four of the goals set out by the National Research Council for future lunar exploration. The heat-flow probe therefore directly addresses the goal of the Lunar Geophysical Network, which is to understand the interior structure and composition of the Moon. A key challenge for heat flow measurement is to install thermal sensors to the depths approximately equal to 3 m that are not influenced by the diurnal, annual, and longer-term fluctuations of the surface thermal environment. In addition, once deployed, the heat flow probe should cause little disturbance to the thermal regime of the surrounding regolith. A heat-flow probe system was developed that has two novel features: (1) it utilizes a pneumatic (gas) approach, excavates a hole by lofting the lunar soil out of the hole, and (2) deploys the heat flow probe, which utilizes a coiled up tape as a thermal probe to reach greater than 3-meter depth. The system is a game-changer for small lunar landers as it exhibits extremely low mass, volume, and simple deployment. The pneumatic system takes advantage of the helium gas used for pressurizing liquid propellant of the lander. Normally, helium is vented once the lander is on the surface, but it can be utilized for powering pneumatic systems. Should sufficient helium not be available, a simple gas delivery system may be taken specifically for the heat flow probe. Either way, the pneumatic heat flow probe system would be much lighter than other systems that entirely rely on the electrical power of the lander.

Solving Partial Differential Equations in a data-driven multiprocessor environment

DOE Office of Scientific and Technical Information (OSTI.GOV)

Gaudiot, J.L.; Lin, C.M.; Hosseiniyar, M.

1988-12-31

Partial differential equations can be found in a host of engineering and scientific problems. The emergence of new parallel architectures has spurred research in the definition of parallel PDE solvers. Concurrently, highly programmable systems such as data-how architectures have been proposed for the exploitation of large scale parallelism. The implementation of some Partial Differential Equation solvers (such as the Jacobi method) on a tagged token data-flow graph is demonstrated here. Asynchronous methods (chaotic relaxation) are studied and new scheduling approaches (the Token No-Labeling scheme) are introduced in order to support the implementation of the asychronous methods in a data-driven environment.more » New high-level data-flow language program constructs are introduced in order to handle chaotic operations. Finally, the performance of the program graphs is demonstrated by a deterministic simulation of a message passing data-flow multiprocessor. An analysis of the overhead in the data-flow graphs is undertaken to demonstrate the limits of parallel operations in dataflow PDE program graphs.« less

Mechanotransduction signaling in podocytes from fluid flow shear stress.

PubMed

Srivastava, Tarak; Dai, Hongying; Heruth, Daniel P; Alon, Uri S; Garola, Robert E; Zhou, Jianping; Duncan, R Scott; El-Meanawy, Ashraf; McCarthy, Ellen T; Sharma, Ram; Johnson, Mark L; Savin, Virginia J; Sharma, Mukut

2018-01-01

Recently, we and others have found that hyperfiltration-associated increase in biomechanical forces, namely, tensile stress and fluid flow shear stress (FFSS), can directly and distinctly alter podocyte structure and function. The ultrafiltrate flow over the major processes and cell body generates FFSS to podocytes. Our previous work suggests that the cyclooxygenase-2 (COX-2)-PGE 2 -PGE 2 receptor 2 (EP2) axis plays an important role in mechanoperception of FFSS in podocytes. To address mechanotransduction of the perceived stimulus through EP2, cultured podocytes were exposed to FFSS (2 dyn/cm 2 ) for 2 h. Total RNA from cells at the end of FFSS treatment, 2-h post-FFSS, and 24-h post-FFSS was used for whole exon array analysis. Differentially regulated genes ( P < 0.01) were analyzed using bioinformatics tools Enrichr and Ingenuity Pathway Analysis to predict pathways/molecules. Candidate pathways were validated using Western blot analysis and then further confirmed to be resulting from a direct effect of PGE 2 on podocytes. Results show that FFSS-induced mechanotransduction as well as exogenous PGE 2 activate the Akt-GSK3β-β-catenin (Ser552) and MAPK/ERK but not the cAMP-PKA signal transduction cascades. These pathways are reportedly associated with FFSS-induced and EP2-mediated signaling in other epithelial cells as well. The current regimen for treating hyperfiltration-mediated injury largely depends on targeting the renin-angiotensin-aldosterone system. The present study identifies specific transduction mechanisms and provides novel information on the direct effect of FFSS on podocytes. These results suggest that targeting EP2-mediated signaling pathways holds therapeutic significance for delaying progression of chronic kidney disease secondary to hyperfiltration.

Distribution and directional fabric of ash-flow sheets in the northwestern Mogollon Plateau, New Mexico.

NASA Technical Reports Server (NTRS)

Rhodes, R. C.; Smith, E. I.

1972-01-01

Individual ash-flow sheets distributed over wide areas in the Mogollon-Datil volcanic province can be delineated and related by flow direction techniques to specific source cauldrons. Two major mid-Tertiary ash flows in the Mogollon Plateau have measurable microscopic directional fabric indicative of primary flow direction imprinted in the ash-flow sheets during late-stage laminar flow. Regional stratigraphic relationships and flow patterns of the ash-flow sheets indicate a late Tertiary origin of the Mogollon Plateau depression. They also show that Basin-Range faulting in southwestern New Mexico was not initiated until after emplacement of the younger ash flow (23 m.y. B.P.). Directional fabric is an inherent property of many calc-alkalic ash-flow sheets and measurement of preferred orientation provides a powerful tool in unravelling the geologic history of complex volcanic terrane.

CD147 modulates the differentiation of T-helper 17 cells in patients with rheumatoid arthritis.

PubMed

Yang, Hui; Wang, Jian; Li, Yu; Yin, Zhen-Jie; Lv, Ting-Ting; Zhu, Ping; Zhang, Yan

2017-01-01

The role of CD147 in regulation of rheumatoid arthritis (RA) is not fully elucidated. The aim of this study was to investigate the effect of cell-to-cell contact of activated CD14 + monocytes with CD4 + T cells, and the modulatory role of CD147 on T-helper 17 (Th17) cells differentiation in patients with RA. Twenty confirmed active RA patients and twenty normal controls were enrolled. CD4 + T cells and CD14 + monocytes were purified by magnetic beads cell sorting. Cells were cultured under different conditions in CD4 + T cells alone, direct cell-to-cell contact co-culture of CD4 + and CD14 + cells, or indirect transwell co-culture of CD4 + /CD14 + cells in response to LPS and anti-CD3 stimulation with or without anti-CD147 antibody pretreatments. The proportion of IL-17-producing CD4 + T cells (defined as Th17 cells) was determined by flow cytometry. The levels of interleukin (IL)-17, IL-6, and IL-1β in the supernatants of cultured cells were measured by ELISA. The optimal condition for in vitro induction of Th17 cells differentiation was co-stimulation with 0.1 μg/mL of LPS and 100 ng/mL of anti-CD3 for 3 days under direct cell-to-cell contact co-culture of CD4 + and CD14 + cells. Anti-CD147 antibody reduced the proportion of Th17 cells, and also inhibited the productions of IL-17, IL-6, and IL-1β in PBMC culture from RA patients. The current results revealed that Th17 differentiation required cell-to-cell contact with activated monocytes. CD147 promoted the differentiation of Th17 cells by regulation of cytokine production, which provided the evidence for pathogenesis and potential therapeutic targets for RA. © 2016 APMIS. Published by John Wiley & Sons Ltd.

The Streaming Potential Generated by Flow of Wet Steam in Capillary Tubes

DOE Office of Scientific and Technical Information (OSTI.GOV)

Marsden, S.S. Jr.; Tyran, Craig K.

1986-01-21

For a constant pressure differential, the flow of wet steam generated electric potentials which increased with time and did not reach equilibrium values. These potentials were found to increase to values greater than 100 volts. The reason for this kind of potential build-up behavior was the presence of tiny flowing water slugs which were interspersed with electrically nonconductive steam vapor slugs. The measured electric potential for wet steam increased with pressure differential, but the relationship was not linear. The increase in potential with pressure drop was attributed both to an increase in fluid flow rate and changes in the wetmore » steam quality.« less

System and method for bidirectional flow and controlling fluid flow in a conduit

DOEpatents

Ortiz, M.G.

1999-03-23

A system for measuring bidirectional flow, including backflow, of fluid in a conduit is disclosed. The system utilizes a structural mechanism to create a pressure differential in the conduit. Pressure sensors are positioned upstream from the mechanism, at the mechanism, and downstream from the mechanism. Data from the pressure sensors are transmitted to a microprocessor or computer, and pressure differential detected between the pressure sensors is then used to calculate the backflow. Control signals may then be generated by the microprocessor or computer to shut off valves located in the conduit, upon the occurrence of backflow, or to control flow, total material dispersed, etc. in the conduit. 3 figs.

Study on low intensity aeration oxygenation model and optimization for shallow water

NASA Astrophysics Data System (ADS)

Chen, Xiao; Ding, Zhibin; Ding, Jian; Wang, Yi

2018-02-01

Aeration/oxygenation is an effective measure to improve self-purification capacity in shallow water treatment while high energy consumption, high noise and expensive management refrain the development and the application of this process. Based on two-film theory, the theoretical model of the three-dimensional partial differential equation of aeration in shallow water is established. In order to simplify the equation, the basic assumptions of gas-liquid mass transfer in vertical direction and concentration diffusion in horizontal direction are proposed based on engineering practice and are tested by the simulation results of gas holdup which are obtained by simulating the gas-liquid two-phase flow in aeration tank under low-intensity condition. Based on the basic assumptions and the theory of shallow permeability, the model of three-dimensional partial differential equations is simplified and the calculation model of low-intensity aeration oxygenation is obtained. The model is verified through comparing the aeration experiment. Conclusions as follows: (1)The calculation model of gas-liquid mass transfer in vertical direction and concentration diffusion in horizontal direction can reflect the process of aeration well; (2) Under low-intensity conditions, the long-term aeration and oxygenation is theoretically feasible to enhance the self-purification capacity of water bodies; (3) In the case of the same total aeration intensity, the effect of multipoint distributed aeration on the diffusion of oxygen concentration in the horizontal direction is obvious; (4) In the shallow water treatment, reducing the volume of aeration equipment with the methods of miniaturization, array, low-intensity, mobilization to overcome the high energy consumption, large size, noise and other problems can provide a good reference.

Role of color Doppler in differentiation of Graves' disease and thyroiditis in thyrotoxicosis

PubMed Central

Donkol, Ragab Hani; Nada, Aml Mohamed; Boughattas, Sami

2013-01-01

AIM: To evaluate the role of thyroid blood flow assessment by color-flow Doppler ultrasonography in the differential diagnosis of thyrotoxicosis and compare it to technetium pertechnetate thyroid scanning. METHODS: Twenty-six patients with thyrotoxicosis were included in the study. Clinical history was taken and physical examination and thyroid function tests were performed for all patients. Thyroid autoantibodies were measured. The thyroid glands of all patients were evaluated by gray scale ultrasonography for size, shape and echotexture. Color-flow Doppler ultrasonography of the thyroid tissue was performed and spectral flow analysis of both inferior thyroid arteries was assessed. Technetium99 pertechnetate scanning of the thyroid gland was done for all patients. According to thyroid scintigraphy, the patients were divided into two groups: 18 cases with Graves’ disease and 8 cases with Hashimoto’s thyroiditis. All patients had suppressed thyrotropin. The diagnosis of Graves’ disease and Hashimoto’s thyroiditis was supported by the clinical picture and follow up of patients. RESULTS: Peak systolic velocities of the inferior thyroid arteries were significantly higher in patients with Graves’ disease than in patients with thyroiditis (P = 0.004 in the right inferior thyroid artery and P = 0.001 in left inferior thyroid artery). Color-flow Doppler ultrasonography parameters demonstrated a sensitivity of 88.9% and a specificity of 87.5% in the differential diagnosis of thyrotoxicosis. CONCLUSION: Color Doppler flow of the inferior thyroid artery can be used in the differential diagnosis of thyrotoxicosis, especially when there is a contraindication of thyroid scintigraphy by radioactive material in some patients. PMID:23671754

Deep Learning Fluid Mechanics

NASA Astrophysics Data System (ADS)

Barati Farimani, Amir; Gomes, Joseph; Pande, Vijay

2017-11-01

We have developed a new data-driven model paradigm for the rapid inference and solution of the constitutive equations of fluid mechanic by deep learning models. Using generative adversarial networks (GAN), we train models for the direct generation of solutions to steady state heat conduction and incompressible fluid flow without knowledge of the underlying governing equations. Rather than using artificial neural networks to approximate the solution of the constitutive equations, GANs can directly generate the solutions to these equations conditional upon an arbitrary set of boundary conditions. Both models predict temperature, velocity and pressure fields with great test accuracy (>99.5%). The application of our framework for inferring and generating the solutions of partial differential equations can be applied to any physical phenomena and can be used to learn directly from experiments where the underlying physical model is complex or unknown. We also have shown that our framework can be used to couple multiple physics simultaneously, making it amenable to tackle multi-physics problems.

On the application of ENO scheme with subcell resolution to conservation laws with stiff source terms

NASA Technical Reports Server (NTRS)

Chang, Shih-Hung

1991-01-01

Two approaches are used to extend the essentially non-oscillatory (ENO) schemes to treat conservation laws with stiff source terms. One approach is the application of the Strang time-splitting method. Here the basic ENO scheme and the Harten modification using subcell resolution (SR), ENO/SR scheme, are extended this way. The other approach is a direct method and a modification of the ENO/SR. Here the technique of ENO reconstruction with subcell resolution is used to locate the discontinuity within a cell and the time evolution is then accomplished by solving the differential equation along characteristics locally and advancing in the characteristic direction. This scheme is denoted ENO/SRCD (subcell resolution - characteristic direction). All the schemes are tested on the equation of LeVeque and Yee (NASA-TM-100075, 1988) modeling reacting flow problems. Numerical results show that these schemes handle this intriguing model problem very well, especially with ENO/SRCD which produces perfect resolution at the discontinuity.

Development of resting membrane potentials in differentiating murine neuroblastoma cells (N1E-115) evaluated by flow cytometry.

PubMed

Kisaalita, W S; Bowen, J M

1997-09-01

With the aid of a voltage-sensitive oxonol dye, flow cytometry was used to measure relative changes in resting membrane potential (V(m)) and forward angle light scatter (FALS) profiles of a differentiating/differentiated murine neuroblastoma cell line (N1E-115). Electrophysiological differentiation was characterized by V(m) establishment. The (V(m))-time profile was found to be seed cell concentration-dependent for cell densities of less than 2 × 10(4) cells/cm(2). At higher initial cell densities, under differentiating culture conditions, V(m) development commenced on day 2 and reached a steady-state on day 12. The relative distribution of differentiated cells between low and high FALS has been proposed as a potential culture electrophysiological differentiation state index. These experiments offer a general methodology to characterize cultured excitable cells of nervous system origin, with respect to electrophysiological differentiation. This information is valuable in studies employing neuroblastoma cells as in vitro screening models for safety/hazard evaluation and/or risk assessment of therapeutical and industrial chemicals under development.

Directional Spread of Surface-Associated Retroviruses Regulated by Differential Virus-Cell Interactions▿ †

PubMed Central

Sherer, Nathan M.; Jin, Jing; Mothes, Walther

2010-01-01

The spread of viral infections involves the directional progression of virus particles from infected cells to uninfected target cells. Prior to entry, the binding of virus particles to specific cell surface receptors can trigger virus surfing, an actin-dependent lateral transport of viruses toward the cell body (M. J. Lehmann et al., J. Cell Biol. 170:317-325, 2005; M. Schelhaas, et al., PLoS Pathog. 4:e1000148, 2008; J. L. Smith, D. S. Lidke, and M. A. Ozbun, Virology 381:16-21, 2008). Here, we have used live-cell imaging to demonstrate that for cells chronically infected with the gammaretrovirus murine leukemia virus in which receptor has been downregulated, a significant portion of completely assembled virus particles are not immediately released into the supernatant but retain long-term association with the cell surface. Retention can be attributed, at least in part, to nonspecific particle attachment to cell surface glycosylaminoglycans. In contrast to virus surfing, viruses retained at the surface of infected cells undergo a lateral motility that is random and actin independent. This diffusive motility can be abruptly halted and converted into inward surfing after treatment with Polybrene, a soluble cation that increases virus-cell adsorption. In the absence of Polybrene, particle diffusion allows for an outward flow of viruses to the infected cell periphery. Peripheral particles are readily captured by and transmitted to neighboring uninfected target cells in a directional fashion. These data demonstrate a surface-based mechanism for the directional spread of viruses regulated by differential virus-cell interactions. PMID:20089647

Changes in migration mode of brine and supercritical CO2 in imbibition process under steady flow state of very slow fluid velocities

NASA Astrophysics Data System (ADS)

Kogure, Tetsuya; Zhang, Yi; Nishizawa, Osamu; Xue, Ziqiu

2018-05-01

Relative permeability curves and flow mechanisms of CO2 and brine in Berea sandstone were investigated during a two-phase flow imbibition process, where CO2 saturation in the rock decreased from 55 per cent to 9 per cent by stepwise decrease of CO2/brine injection ratios. Total fluid flow velocity was 4.25 × 10-6 m/s, corresponding to the capillary number of order ˜10-8 for CO2 flow. The relative permeability curves showed a slight hysteresis compared to those during the drainage process. Local CO2 saturation and the differential pressure showed temporal fluctuations when the average differential pressure showed constant values or very small trends. The fluctuations in local CO2 saturation correlate with local porosity distributions. The differential pressure between the inlet and outlet ends showed the largest fluctuation when the CO2/brine ratio equals to one. A final brine-only injection resulted in more CO2 trapped within low porosity zones. These results suggest important roles of ganglion dynamics in the low flow rate ranges, where fluid pathways undergo repetitive brine snap-off and coalescence of CO2 ganglia that causes morphological changes in distributions of CO2 pathways.

Programming for energy monitoring/display system in multicolor lidar system research

NASA Technical Reports Server (NTRS)

Alvarado, R. C., Jr.; Allen, R. J.

1982-01-01

The Z80 microprocessor based computer program that directs and controls the operation of the six channel energy monitoring/display system that is a part of the NASA Multipurpose Airborne Differential Absorption Lidar (DIAL) system is described. The program is written in the Z80 assembly language and is located on EPROM memories. All source and assembled listings of the main program, five subroutines, and two service routines along with flow charts and memory maps are included. A combinational block diagram shows the interfacing (including port addresses) between the six power sensors, displays, front panel controls, the main general purpose minicomputer, and this dedicated microcomputer system.

Exact Solutions for Stokes' Flow of a Non-Newtonian Nanofluid Model: A Lie Similarity Approach

NASA Astrophysics Data System (ADS)

Aziz, Taha; Aziz, A.; Khalique, C. M.

2016-07-01

The fully developed time-dependent flow of an incompressible, thermodynamically compatible non-Newtonian third-grade nanofluid is investigated. The classical Stokes model is considered in which the flow is generated due to the motion of the plate in its own plane with an impulsive velocity. The Lie symmetry approach is utilised to convert the governing nonlinear partial differential equation into different linear and nonlinear ordinary differential equations. The reduced ordinary differential equations are then solved by using the compatibility and generalised group method. Exact solutions for the model equation are deduced in the form of closed-form exponential functions which are not available in the literature before. In addition, we also derived the conservation laws associated with the governing model. Finally, the physical features of the pertinent parameters are discussed in detail through several graphs.

Heat Transfer Analysis for Stationary Boundary Layer Slip Flow of a Power-Law Fluid in a Darcy Porous Medium with Plate Suction/Injection

PubMed Central

Aziz, Asim; Ali, Yasir; Aziz, Taha; Siddique, J. I.

2015-01-01

In this paper, we investigate the slip effects on the boundary layer flow and heat transfer characteristics of a power-law fluid past a porous flat plate embedded in the Darcy type porous medium. The nonlinear coupled system of partial differential equations governing the flow and heat transfer of a power-law fluid is transformed into a system of nonlinear coupled ordinary differential equations by applying a suitable similarity transformation. The resulting system of ordinary differential equations is solved numerically using Matlab bvp4c solver. Numerical results are presented in the form of graphs and the effects of the power-law index, velocity and thermal slip parameters, permeability parameter, suction/injection parameter on the velocity and temperature profiles are examined. PMID:26407162

Economic method for measuring ultra-low flow rates of fluids

NASA Technical Reports Server (NTRS)

Bogdanovic, J. A.; Keller, W. F.

1970-01-01

Capillary tube flowmeter measures ultra-low flows of very corrosive fluids /such as chlorine trifluoride and liquid fluorine/ and other liquids with reasonable accuracy. Flowmeter utilizes differential pressure transducer and operates on the principle that for laminar flow in the tube, pressure drop is proportional to flow rate.

Direct Numerical Simulation of Transition in a Swept-Wing Boundary Layer

NASA Technical Reports Server (NTRS)

Duan, Lian; Choudhari, Meelan M.; Li, Fei

2013-01-01

Direct numerical simulation (DNS) is performed to examine laminar to turbulent transition due to high-frequency secondary instability of stationary crossflow vortices in a subsonic swept-wing boundary layer for a realistic natural-laminar-flow airfoil configuration. The secondary instability is introduced via inflow forcing derived from a two-dimensional, partial-differential-equation based eigenvalue computation; and the mode selected for forcing corresponds to the most amplified secondary instability mode which, in this case, derives a majority of its growth from energy production mechanisms associated with the wall-normal shear of the stationary basic state. Both the growth of the secondary instability wave and the resulting onset of laminar-turbulent transition are captured within the DNS computations. The growth of the secondary instability wave in the DNS solution compares well with linear secondary instability theory when the amplitude is small; the linear growth is followed by a region of reduced growth resulting from nonlinear effects before an explosive onset of laminar breakdown to turbulence. The peak fluctuations are concentrated near the boundary layer edge during the initial stage of transition, but rapidly propagates towards the surface during the process of laminar breakdown. Both time-averaged statistics and flow visualization based on the DNS reveal a sawtooth transition pattern that is analogous to previously documented surface flow visualizations of transition due to stationary crossflow instability. The memory of the stationary crossflow vortex is found to persist through the transition zone and well beyond the location of the maximum skin friction.

Understanding cell passage through constricted microfluidic channels

NASA Astrophysics Data System (ADS)

Cartas-Ayala, Marco A.; Karnik, Rohit

2012-11-01

Recently, several microfluidic platforms have been proposed to characterize cells based on their behaviour during cell passage through constricted channels. Variables like transit time have been analyzed in disease states like sickle cell anemia, malaria and sepsis. Nevertheless, it is hard to make direct comparisons between different platforms and cell types. We present experimental results of the relationship between solid deformable particle properties, i.e. stiffness and relative particle size, and flow properties, i.e. particle's velocity. We measured the hydrodynamic variables during the flow of HL-60 cells, a white myeloid cell type, in narrow microfluidic square channels using a microfluidic differential manometer. We measured the flow force required to move cells of different sizes through microchannels and quantified friction forces opposing cell passage. We determined the non-dimensional parameters that influence the flow of cells and we used them to obtain a non dimensional expression that can be used to predict the forces needed to drive cells through microchannels. We found that the friction force needed to flow HL-60 through a microfluidic channel is the sum of two parts. The first part is a static friction force that is proportional to the force needed to keep the force compressed. The second part is a factor that is proportional to the cell velocity, hence a dynamic term, and slightly sensitive to the compressive force. We thank CONACYT (Mexican Science and Technology Council) for supporting this project, grant 205899.

Pressure measurement in supersonic air flow by differential absorptive laser-induced thermal acoustics.

PubMed

Hart, Roger C; Herring, G C; Balla, R Jeffrey

2007-06-15

Nonintrusive, off-body flow barometry in Mach 2 airflow has been demonstrated in a large-scale supersonic wind tunnel using seedless laser-induced thermal acoustics (LITA). The static pressure of the gas flow is determined with a novel differential absorption measurement of the ultrasonic sound produced by the LITA pump process. Simultaneously, the streamwise velocity and static gas temperature of the same spatially resolved sample volume were measured with this nonresonant time-averaged LITA technique. Mach number, temperature, and pressure have 0.2%, 0.4%, and 4% rms agreement, respectively, in comparison with known free-stream conditions.

A note on the solutions of some nonlinear equations arising in third-grade fluid flows: an exact approach.

PubMed

Aziz, Taha; Mahomed, F M

2014-01-01

In this communication, we utilize some basic symmetry reductions to transform the governing nonlinear partial differential equations arising in the study of third-grade fluid flows into ordinary differential equations. We obtain some simple closed-form steady-state solutions of these reduced equations. Our solutions are valid for the whole domain [0,∞) and also satisfy the physical boundary conditions. We also present the numerical solutions for some of the underlying equations. The graphs corresponding to the essential physical parameters of the flow are presented and discussed.

Pressure Measurement in Supersonic Air Flow by Differential Absorptive Laser-Induced Thermal Acoustics

NASA Technical Reports Server (NTRS)

Hart, Roger C.; Herring, Gregory C.; Balla, Robert J.

2007-01-01

Nonintrusive, off-body flow barometry in Mach-2 airflow has been demonstrated in a large-scale supersonic wind tunnel using seedless laser-induced thermal acoustics (LITA). The static pressure of the gas flow is determined with a novel differential absorption measurement of the ultrasonic sound produced by the LITA pump process. Simultaneously, stream-wise velocity and static gas temperature of the same spatially-resolved sample volume were measured with this nonresonant time-averaged LITA technique. Mach number, temperature and pressure have 0.2%, 0.4%, and 4% rms agreement, respectively, in comparison with known free-stream conditions.

A Note on the Solutions of Some Nonlinear Equations Arising in Third-Grade Fluid Flows: An Exact Approach

PubMed Central

Mahomed, F. M.

2014-01-01

In this communication, we utilize some basic symmetry reductions to transform the governing nonlinear partial differential equations arising in the study of third-grade fluid flows into ordinary differential equations. We obtain some simple closed-form steady-state solutions of these reduced equations. Our solutions are valid for the whole domain [0,∞) and also satisfy the physical boundary conditions. We also present the numerical solutions for some of the underlying equations. The graphs corresponding to the essential physical parameters of the flow are presented and discussed. PMID:25143962

The role of Coulomb collisions in limiting differential flow and temperature differences in the solar wind

NASA Technical Reports Server (NTRS)

Neugebauer, M.

1976-01-01

Data obtained by OGO 5 are used to confirm IMP 6 observations of an inverse dependence of the helium-to-hydrogen temperature ratio in the solar wind on the ratio of solar-wind expansion time to the Coulomb-collision equipartition time. The analysis is then extended to determine the relation of the difference between the hydrogen and helium bulk velocities (the differential flow vector) with the ratio between the solar-wind expansion time and the time required for Coulomb collisions to slow down a beam of ions passing through a plasma. It is found that the magnitude of the differential flow vector varies inversely with the time ratio when the latter is small and approaches zero when it is large. These results are shown to suggest a model of continuous preferential heating and acceleration of helium (or cooling and deceleration of hydrogen), which is cancelled or limited by Coulomb collisions by the time the plasma has reached 1 AU. Since the average dependence of the differential flow vector on the time ratio cannot explain all the systematic variations of the vector observed in corotating high-velocity streams, it is concluded that additional helium acceleration probably occurs on the leading edge of such streams.

Redistribution of blood within the body is important for thermoregulation in an ectothermic vertebrate (Crocodylus porosus).

PubMed

Seebacher, Frank; Franklin, Craig E

2007-11-01

Changes in blood flow are a principal mechanism of thermoregulation in vertebrates. Changes in heart rate will alter blood flow, although multiple demands for limited cardiac output may compromise effective thermoregulation. We tested the hypothesis that regional differences in blood flow during heating and cooling can occur independently from changes in heart rate. We measured heart rate and blood pressure concurrently with blood flow in the crocodile, Crocodylus porosus. We measured changes in blood flow by laser Doppler flowmetry, and by injecting coloured microspheres. All measurements were made under different heat loads, with and without blocking cholinergic and beta-adrenergic receptors (autonomic blockade). Heart rates were significantly faster during heating than cooling in the control animals, but not when autonomic receptors were blocked. There were no significant differences in blood flow distribution between the control and autonomic blockade treatments. In both treatments, blood flow was directed to the dorsal skin and muscle and away from the tail and duodenum during heating. When the heat source was switched off, there was a redistribution of blood from the dorsal surface to the duodenum. Blood flow to the leg skin and muscle, and to the liver did not change significantly with thermal state. Blood pressure was significantly higher during the autonomic blockade than during the control. Thermal time constants of heating and cooling were unaffected by the blockade of autonomic receptors. We concluded that animals partially compensated for a lack of differential heart rates during heating and cooling by redistributing blood within the body, and by increasing blood pressure to increase flow. Hence, measures of heart rate alone are insufficient to assess physiological thermoregulation in reptiles.

Algebraic multigrid preconditioners for two-phase flow in porous media with phase transitions

NASA Astrophysics Data System (ADS)

Bui, Quan M.; Wang, Lu; Osei-Kuffuor, Daniel

2018-04-01

Multiphase flow is a critical process in a wide range of applications, including oil and gas recovery, carbon sequestration, and contaminant remediation. Numerical simulation of multiphase flow requires solving of a large, sparse linear system resulting from the discretization of the partial differential equations modeling the flow. In the case of multiphase multicomponent flow with miscible effect, this is a very challenging task. The problem becomes even more difficult if phase transitions are taken into account. A new approach to handle phase transitions is to formulate the system as a nonlinear complementarity problem (NCP). Unlike in the primary variable switching technique, the set of primary variables in this approach is fixed even when there is phase transition. Not only does this improve the robustness of the nonlinear solver, it opens up the possibility to use multigrid methods to solve the resulting linear system. The disadvantage of the complementarity approach, however, is that when a phase disappears, the linear system has the structure of a saddle point problem and becomes indefinite, and current algebraic multigrid (AMG) algorithms cannot be applied directly. In this study, we explore the effectiveness of a new multilevel strategy, based on the multigrid reduction technique, to deal with problems of this type. We demonstrate the effectiveness of the method through numerical results for the case of two-phase, two-component flow with phase appearance/disappearance. We also show that the strategy is efficient and scales optimally with problem size.

DEVELOPMENT OF PLASTICITY MODEL USING NON ASSOCIATED FLOW RULE FOR HCP MATERIALS INCLUDING ZIRCONIUM FOR NUCLEAR APPLICATIONS

DOE Office of Scientific and Technical Information (OSTI.GOV)

Michael V. Glazoff; Jeong-Whan Yoon

2013-08-01

In this report (prepared in collaboration with Prof. Jeong Whan Yoon, Deakin University, Melbourne, Australia) a research effort was made to develop a non associated flow rule for zirconium. Since Zr is a hexagonally close packed (hcp) material, it is impossible to describe its plastic response under arbitrary loading conditions with any associated flow rule (e.g. von Mises). As a result of strong tension compression asymmetry of the yield stress and anisotropy, zirconium displays plastic behavior that requires a more sophisticated approach. Consequently, a new general asymmetric yield function has been developed which accommodates mathematically the four directional anisotropies alongmore » 0 degrees, 45 degrees, 90 degrees, and biaxial, under tension and compression. Stress anisotropy has been completely decoupled from the r value by using non associated flow plasticity, where yield function and plastic potential have been treated separately to take care of stress and r value directionalities, respectively. This theoretical development has been verified using Zr alloys at room temperature as an example as these materials have very strong SD (Strength Differential) effect. The proposed yield function reasonably well models the evolution of yield surfaces for a zirconium clock rolled plate during in plane and through thickness compression. It has been found that this function can predict both tension and compression asymmetry mathematically without any numerical tolerance and shows the significant improvement compared to any reported functions. Finally, in the end of the report, a program of further research is outlined aimed at constructing tensorial relationships for the temperature and fluence dependent creep surfaces for Zr, Zircaloy 2, and Zircaloy 4.« less

[Expression of ICAT and Wnt signaling-related proteins in the monocytic differentiation of HL-60 cells induced by a new steroidal drug NSC67657].

PubMed

Wang, J S; Wang, W J; Wang, T; Zhang, Y

2016-04-01

To investigate the expression of mRNA and proteins of β-catenin, TCF-4 (ICAT) and Wnt signaling pathway-related genes in the monocytic differentiation of acute myeloid leukemia HL-60 cells induced by a new steroidal drug NSC67657. Wright's staining and α-NBE staining were used to observe the differentiation of HL-60 cells after 5 days of 10 μmol/L NSC67657 treatment. Flow cytometry (FCM) was used to detect the differentiation and cell cycles. The expressions of mRNA and proteins of ICAT and Wnt signaling pathway-related factors, including β-catenin, TCF-4, c-myc, cyclin D1 and TCF-1 before and after differentiation, were detected by RT-PCR and Western blot. Morphological observation showed that NSC67657 induced monocytic differentiation of HL-60 cells. At 5 days after 10 μmol/L NSC67657 treatment, the number of CD14(+) HL-60 cells was (94.37±2.84)%, significantly higher than the (1.31±0.09)% in control group (P<0.01). The flow cytometry assay revealed that NSC67657 induced (76.46±2.83)% of G1/G0 phase arrest, significantly higher than that of (59.40±5.42)% in the control group (P<0.05), while the S phase cells were of (18.76±0.98)%, significantly lower than that of (34.38±2.61) % in the control group (P<0.05). The NSC67657 treatment also up-regulated the expression of ICAT mRNA and protein, and down-regulated the expression of β-catenin mRNA and protin (P<0.01 for all). However, the nuclear expression of β-catenin was down-regulated (P<0.01). The NSC67657 treatment induced nonsignificant alterations of TCF-4 mRNA, total protein and nuclear protein in the HL-60 cells (P>0.05 for all). The target genes of Wnt signaling pathway, including c-myc, cyclinD1 and TCF-1 mRNA and proteins in the HL-60 cells were significantly down-regulated after NSC67657 treatment (P<0.05). The new steroidal drug NSC67657 induces monocytic differentiation of HL-60 cells, and down-regulates the expression of β-catenin and target genes of Wnt signaling pathway. These results indicate that Wnt signaling pathway may be directly or indirectly involved in the monocytic differentiation process of HL-60 cells.

Flow behaviour of supercritical CO2 and brine in Berea sandstone during drainage and imbibition revealed by medical X-ray CT images

NASA Astrophysics Data System (ADS)

Zhang, Yi; Nishizawa, Osamu; Kiyama, Tamotsu; Chiyonobu, Shun; Xue, Ziqiu

2014-06-01

We injected Berea sandstone with supercritical CO2 and imaged the results with a medical X-ray computed tomography (CT) scanner. The images were acquired by injecting CO2 into a core of brine-saturated sandstone (drainage), and additional images were acquired during reinjection of brine (imbibition) after drainage. We then analysed the temporal variations of CO2 saturation maps obtained from the CT images. The experiments were performed under a confining pressure of 12 MPa, a pore pressure of 10 MPa and a temperature of 40 °C. Porosity and CO2 saturation were calculated for each image voxel of the rock on the basis of the Hounsfield unit values (CT numbers) measured at three states of saturation: dry, full brine saturation and full CO2 saturation. The saturation maps indicated that the distributions of CO2 and brine were controlled by the sub-core-scale heterogeneities which consisted of a laminated structure (bedding) with high- and low-porosity layers. During drainage, CO2 preferentially flowed through the high-porosity layers where most of the CO2 was entrapped during low flow-rate imbibition. The entrapped CO2 was flushed out when high flow-rate imbibition commenced. Plots of the voxel's CT number against porosity revealed the relationship between fluid replacement and porosity. By reference to the CT numbers at the full brine-saturated stage, differential CT numbers were classified into three bins corresponding to voxel porosity: high, medium and low porosity. Distributions of the differential CT number for the three porosity bins were bimodal and in order with respect to the porosity bins during both drainage and imbibitions; however, the order differed between the two stages. This difference suggested that different replacement mechanisms operated for the two processes. Spatial autocorrelation of CO2 saturation maps on sections perpendicular to the flow direction revealed remarkable changes during passage of the replacement fronts during both drainage and imbibition, changes reflecting the interfingering pattern across the replacement fronts. Although the permeability differences between high- and low-porosity layers were not sufficiently large to disturb the uniform flow of brine, the CO2 concentration in the high-porosity layers may have been caused by the differences of capillary pressure between wide and narrow pore throats, perhaps enhanced by an invasion percolation mechanism in flow-path networks.

Tracing back seed and pollen flow within the crop-wild Beta vulgaris complex: genetic distinctiveness vs. hot spots of hybridization over a regional scale.

PubMed

Viard, Frédérique; Arnaud, Jean-François; Delescluse, Maxime; Cuguen, Joël

2004-06-01

Hybrids between transgenic crops and wild relatives have been documented successfully in a wide range of cultivated species, having implications on conservation and biosafety management. Nonetheless, the magnitude and frequency of hybridization in the wild is still an open question, in particular when considering several populations at the landscape level. The Beta vulgaris complex provides an excellent biological model to tackle this issue. Weed beets contaminating sugar beet fields are expected to act as a relay between wild populations and crops and from crops-to-crops. In one major European sugar beet production area, nine wild populations and 12 weed populations were genetically characterized using cytoplasmic markers specific to the cultivated lines and nuclear microsatellite loci. A tremendous overall genetic differentiation between neighbouring wild and weed populations was depicted. However, genetic admixture analyses at the individual level revealed clear evidence for gene flow between wild and weed populations. In particular, one wild population displayed a high magnitude of nuclear genetic admixture, reinforced by direct seed flow as evidenced by cytoplasmic markers. Altogether, weed beets were shown to act as relay for gene flow between crops to wild populations and crops to crops by pollen and seeds at a landscape level.

Turbulent Flame Processes Via Diffusion Flame-Vortex Ring Interactions

NASA Technical Reports Server (NTRS)

Dahm, Werner J. A.; Chen, Shin-Juh; Silver, Joel A.; Piltch, Nancy D.; VanderWal, Randall L.

2001-01-01

Flame-vortex interactions are canonical configurations that can be used to study the underlying processes occurring in turbulent reacting flows. This configuration contains many of the fundamental aspects of the coupling between fluid dynamics and combustion that could be investigated with more controllable conditions than are possible under direct investigations of turbulent flames. Diffusion flame-vortex ring interaction contains many of the fundamental elements of flow, transport, combustion, and soot processes found in turbulent diffusion flames. Some of these elements include concentrated vorticity, entrainment and mixing, strain and nonequilibrium phenomena, diffusion and differential diffusion, partial premixing and diluent effects, soot formation and oxidation, and heat release effects. Such simplified flowfield allows the complex processes to be examined more closely and yet preserving the physical processes present in turbulent reacting flows. Furthermore, experimental results from the study of flame-vortex interactions are useful for the validation of numerical simulations and more importantly to deepen our understanding of the fundamental processes present in reacting flows. Experimental and numerical results obtained under microgravity conditions of the diffusion flame-vortex ring interaction are summarized in this paper. Results are obtained using techniques that include Flame Luminosity Imaging (FLI), Laser Soot-Mie Scattering (LSMS), Computational Fluid Dynamics and Combustion (CFDC), and Diode Laser Spectroscopy/Iterative Temperature with Assumed Chemistry (DLS/ITAC).

Monitoring the Erosion of Hydrolytically-Degradable Nanogels via Multiangle Light Scattering Coupled to Asymmetrical Flow Field-Flow Fractionation

PubMed Central

Smith, Michael H.; South, Antoinette B.; Gaulding, Jeffrey C.; Lyon, L. Andrew

2009-01-01

We describe the synthesis and characterization of degradable nanogels that display bulk erosion under physiologic conditions (pH = 7.4, 37 °C). Erodible poly(N-isopropylmethacrylamide) nanogels were synthesized by copolymerization with N,O-(dimethacryloyl)hydroxylamine, a cross-linker previously used in the preparation of non-toxic and biodegradable bulk hydrogels. To monitor particle degradation, we employed multiangle light scattering and differential refractometry detection following asymmetrical flow field-flow fractionation. This approach allowed the detection of changes in nanogel molar mass and topology as a function of both temperature and pH. Particle erosion was evident from both an increase in nanogel swelling and a decrease in scattering intensity as a function of time. Following these analyses, the samples were recovered for subsequent characterization by direct particle tracking, which yields hydrodynamic size measurements and enables number density determination. Additionally, we confirmed the conservation of nanogel stimuli-responsivity through turbidity measurements. Thus, we have demonstrated the synthesis of degradable nanogels that erode under conditions and on timescales that are relevant for many drug delivery applications. The combined separation and light scattering detection method is demonstrated to be a versatile means to monitor erosion and should also find applicability in the characterization of other degradable particle constructs. PMID:20000662

The Thin Oil Film Equation

NASA Technical Reports Server (NTRS)

Brown, James L.; Naughton, Jonathan W.

1999-01-01

A thin film of oil on a surface responds primarily to the wall shear stress generated on that surface by a three-dimensional flow. The oil film is also subject to wall pressure gradients, surface tension effects and gravity. The partial differential equation governing the oil film flow is shown to be related to Burgers' equation. Analytical and numerical methods for solving the thin oil film equation are presented. A direct numerical solver is developed where the wall shear stress variation on the surface is known and which solves for the oil film thickness spatial and time variation on the surface. An inverse numerical solver is also developed where the oil film thickness spatial variation over the surface at two discrete times is known and which solves for the wall shear stress variation over the test surface. A One-Time-Level inverse solver is also demonstrated. The inverse numerical solver provides a mathematically rigorous basis for an improved form of a wall shear stress instrument suitable for application to complex three-dimensional flows. To demonstrate the complexity of flows for which these oil film methods are now suitable, extensive examination is accomplished for these analytical and numerical methods as applied to a thin oil film in the vicinity of a three-dimensional saddle of separation.

Numerical investigation of the onset of centrifugal buoyancy in a rotating cavity

NASA Astrophysics Data System (ADS)

Pitz, Diogo B.; Marxen, Olaf; Chew, John

2016-11-01

Buoyancy-induced flows in a differentially heated rotating annulus present a multitude of dynamics when control parameters such as rotation rate, temperature difference and Prandtl number are varied. Whilst most of the work in this area has been motivated by applications involving geophysics, the problem of buoyancy-induced convection in rotating systems is also relevant in industrial applications such as the flow between rotating disks of turbomachinery internal air systems, in which buoyancy plays a major role and poses a challenge to accurately predict temperature distributions and heat transfer rates. In such applications the rotational speeds involved are very large, so that the centrifugal accelerations induced are much higher than gravity. In this work we perform direct numerical simulations and linear stability analysis of flow induced by centrifugal buoyancy in a sealed rotating annulus of finite gap with flat end-walls, using a canonical setup representative of an internal air system rotating cavity. The analysis focuses on the behaviour of small-amplitude disturbances added to the base flow, and how those affect the onset of Rossby waves and, ultimately, the transition to a fully turbulent state where convection columns no longer have a well-defined structure. Diogo B. Pitz acknowledges the financial support from the Capes foundation through the Science without Borders program.

Interaction of differentiated human adipocytes with macrophages leads to trogocytosis and selective IL-6 secretion

PubMed Central

Sárvári, A K; Doan-Xuan, Q-M; Bacsó, Z; Csomós, I; Balajthy, Z; Fésüs, L

2015-01-01

Obesity leads to adipose tissue inflammation that is characterized by increased release of proinflammatory molecules and the recruitment of activated immune cells. Although macrophages are present in the highest number among the immune cells in obese adipose tissue, not much is known about their direct interaction with adipocytes. We have introduced an ex vivo experimental system to characterize the cellular interactions and the profile of secreted cytokines in cocultures of macrophages and human adipocytes differentiated from either mesenchymal stem cells or a preadipocyte cell line. As observed by time-lapse microscopy, flow, and laser-scanning cytometry, macrophages phagocytosed bites of adipocytes (trogocytosis), which led to their de novo, phagocytosis and NF-κB-dependent synthesis, then release of interleukin (IL)-6 and monocyte chemoattractant protein (MCP)-1. IL-6 secretion was not accompanied by secretion of other proinflammatory cytokines, such as tumor necrosis factor (TNF)-α and IL-8, except MCP-1. LPS-induced release of TNF-α, IL-8 and MCP-1 was decreased in the presence of the differentiated adipocytes but the IL-6 level did not subside suggesting that phagocytosis-dependent IL-6 secretion may have significant regulatory function in the inflamed adipose tissue. PMID:25611388

Interaction of differentiated human adipocytes with macrophages leads to trogocytosis and selective IL-6 secretion.

PubMed

Sárvári, A K; Doan-Xuan, Q-M; Bacsó, Z; Csomós, I; Balajthy, Z; Fésüs, L

2015-01-22

Obesity leads to adipose tissue inflammation that is characterized by increased release of proinflammatory molecules and the recruitment of activated immune cells. Although macrophages are present in the highest number among the immune cells in obese adipose tissue, not much is known about their direct interaction with adipocytes. We have introduced an ex vivo experimental system to characterize the cellular interactions and the profile of secreted cytokines in cocultures of macrophages and human adipocytes differentiated from either mesenchymal stem cells or a preadipocyte cell line. As observed by time-lapse microscopy, flow, and laser-scanning cytometry, macrophages phagocytosed bites of adipocytes (trogocytosis), which led to their de novo, phagocytosis and NF-κB-dependent synthesis, then release of interleukin (IL)-6 and monocyte chemoattractant protein (MCP)-1. IL-6 secretion was not accompanied by secretion of other proinflammatory cytokines, such as tumor necrosis factor (TNF)-α and IL-8, except MCP-1. LPS-induced release of TNF-α, IL-8 and MCP-1 was decreased in the presence of the differentiated adipocytes but the IL-6 level did not subside suggesting that phagocytosis-dependent IL-6 secretion may have significant regulatory function in the inflamed adipose tissue.

Temperature gradient affects differentiation of gene expression and SNP allele frequencies in the dominant Lake Baikal zooplankton species.

PubMed

Bowman, Larry L; Kondrateva, Elizaveta S; Timofeyev, Maxim A; Yampolsky, Lev Y

2018-06-01

Local adaptation and phenotypic plasticity are main mechanisms of organisms' resilience in changing environments. Both are affected by gene flow and are expected to be weak in zooplankton populations inhabiting large continuous water bodies and strongly affected by currents. Lake Baikal, the deepest and one of the coldest lakes on Earth, experienced epilimnion temperature increase during the last 100 years, exposing Baikal's zooplankton to novel selective pressures. We obtained a partial transcriptome of Epischura baikalensis (Copepoda: Calanoida), the dominant component of Baikal's zooplankton, and estimated SNP allele frequencies and transcript abundances in samples from regions of Baikal that differ in multiyear average surface temperatures. The strongest signal in both SNP and transcript abundance differentiation is the SW-NE gradient along the 600+ km long axis of the lake, suggesting isolation by distance. SNP differentiation is stronger for nonsynonymous than synonymous SNPs and is paralleled by differential survival during a laboratory exposure to increased temperature, indicating directional selection operating on the temperature gradient. Transcript abundance, generally collinear with the SNP differentiation, shows samples from the warmest, less deep location clustering together with the southernmost samples. Differential expression is more frequent among transcripts orthologous to candidate thermal response genes previously identified in model arthropods, including genes encoding cytoskeleton proteins, heat-shock proteins, proteases, enzymes of central energy metabolism, lipid and antioxidant pathways. We conclude that the pivotal endemic zooplankton species in Lake Baikal exists under temperature-mediated selection and possesses both genetic variation and plasticity to respond to novel temperature-related environmental pressures. © 2018 John Wiley & Sons Ltd.

Nature of fluid flows in differentially heated cylindrical container filled with a stratified solution

NASA Technical Reports Server (NTRS)

Wang, Jai-Ching

1992-01-01

Semiconductor crystals such as Hg(1-x)Cd(x)Te grown by unidirectional solidification Bridgmann method have shown compositional segregations in both the axial and radial directions. Due to the wide separation between the liquidus and the solidus of its pseudobinary phase diagram, there is a diffusion layer of higher HgTe content built up in the melt near the melt-solid interface which gives a solute concentration gradient in the axial direction. Because of the higher thermal conductivity in the melt than that in the crystal there is a thermal leakage through the fused silica crucible wall near the melt-solid interface. This gives a thermal gradient in the radial direction. Hart (1971), Thorpe, Hutt and Soulsby (1969) have shown that under such condition a fluid will become convectively unstable as a result of different diffusivities of temperature and solute. It is quite important to understand the effects of this thermosolute convection on the compositional segregation in the unidirectionally solidified crystals. To reach this goal, we start with a simplified problem. We study the nature of fluid flows of a stratified solution in a cylindrical container with a radial temperature gradient. The cylindrical container wall is considered to be maintained at a higher temperature than that at the center of the solution and the solution in the lower gravitational direction has higher solute concentration which decrease linearly to a lower concentration and then remain constant to the top of the solution. The sample solution is taken to be salt water.

Mixed convection flow of viscoelastic fluid by a stretching cylinder with heat transfer.

PubMed

Hayat, Tasawar; Anwar, Muhammad Shoaib; Farooq, Muhammad; Alsaedi, Ahmad

2015-01-01

Flow of viscoelastic fluid due to an impermeable stretching cylinder is discussed. Effects of mixed convection and variable thermal conductivity are present. Thermal conductivity is taken temperature dependent. Nonlinear partial differential system is reduced into the nonlinear ordinary differential system. Resulting nonlinear system is computed for the convergent series solutions. Numerical values of skin friction coefficient and Nusselt number are computed and discussed. The results obtained with the current method are in agreement with previous studies using other methods as well as theoretical ideas. Physical interpretation reflecting the contribution of influential parameters in the present flow is presented. It is hoped that present study serves as a stimulus for modeling further stretching flows especially in polymeric and paper production processes.

Mixed Convection Flow of Viscoelastic Fluid by a Stretching Cylinder with Heat Transfer

PubMed Central

Hayat, Tasawar; Anwar, Muhammad Shoaib; Farooq, Muhammad; Alsaedi, Ahmad

2015-01-01

Flow of viscoelastic fluid due to an impermeable stretching cylinder is discussed. Effects of mixed convection and variable thermal conductivity are present. Thermal conductivity is taken temperature dependent. Nonlinear partial differential system is reduced into the nonlinear ordinary differential system. Resulting nonlinear system is computed for the convergent series solutions. Numerical values of skin friction coefficient and Nusselt number are computed and discussed. The results obtained with the current method are in agreement with previous studies using other methods as well as theoretical ideas. Physical interpretation reflecting the contribution of influential parameters in the present flow is presented. It is hoped that present study serves as a stimulus for modeling further stretching flows especially in polymeric and paper production processes. PMID:25775032

A large deviations principle for stochastic flows of viscous fluids

NASA Astrophysics Data System (ADS)

Cipriano, Fernanda; Costa, Tiago

2018-04-01

We study the well-posedness of a stochastic differential equation on the two dimensional torus T2, driven by an infinite dimensional Wiener process with drift in the Sobolev space L2 (0 , T ;H1 (T2)) . The solution corresponds to a stochastic Lagrangian flow in the sense of DiPerna Lions. By taking into account that the motion of a viscous incompressible fluid on the torus can be described through a suitable stochastic differential equation of the previous type, we study the inviscid limit. By establishing a large deviations principle, we show that, as the viscosity goes to zero, the Lagrangian stochastic Navier-Stokes flow approaches the Euler deterministic Lagrangian flow with an exponential rate function.

Apparent dispersion in transient groundwater flow

USGS Publications Warehouse

Goode, Daniel J.; Konikow, Leonard F.

1990-01-01

This paper investigates the effects of large-scale temporal velocity fluctuations, particularly changes in the direction of flow, on solute spreading in a two-dimensional aquifer. Relations for apparent longitudinal and transverse dispersivity are developed through an analytical solution for dispersion in a fluctuating, quasi-steady uniform flow field, in which storativity is zero. For transient flow, spatial moments are evaluated from numerical solutions. Ignored or unknown transients in the direction of flow primarily act to increase the apparent transverse dispersivity because the longitudinal dispersivity is acting in a direction that is not the assumed flow direction. This increase is a function of the angle between the transient flow vector and the assumed steady state flow direction and the ratio of transverse to longitudinal dispersivity. The maximum effect on transverse dispersivity occurs if storativity is assumed to be zero, such that the flow field responds instantly to boundary condition changes.

Long noncoding RNA H19 mediates LCoR to impact the osteogenic and adipogenic differentiation of mBMSCs in mice through sponging miR-188.

PubMed

Wang, Yijun; Liu, Wentao; Liu, Yadong; Cui, Jianli; Zhao, Zhiwei; Cao, Hui; Fu, Zhuo; Liu, Bin

2018-04-16

The research aimed to examine the expression of lncRNA H19, miR-188, and LCoR in mouse bone marrow stromal stem cells (mBMSCs), and to investigate the regulatory mechanism of lncRNA H19/miR-188/LCoR in osteogenic and adipogenic differentiation of mBMSCs. The expression of miR-188 in mBMSCs and osteogenesis induced mBMSCs was detected by stem-loop RT-PCR, while the expression of H19 and LCoR in mBMSCs and adipogenesis induced mBMSCs was examined by qRT-PCR. Luciferase reporter assay verified the targeted relationship between miR-188 and H19 or LCoR. Cell proliferation ability was determined by MTT assay, while cell surface markers of mBMSCs were analyzed via flow cytometry. Alkaline phosphatase staining and Alizarin red staining was utilized to detect the osteogenic differentiation capability of mBMSCs, whereas Oil red O staining was applied to examine the ability of adipogenic differentiation of mBMSCs. The expression of miR-188 was lower in osteogenesis induced mBMSCs compared with normal mBMSCs, while H19 and LCoR were downregulated in adipogenic induced mBMSCs. Si-H19 could significantly increase the mRNA level of miR-188. Meanwhile, miR-188 directly regulated LCoR in mBMSCs. Overexpression of miR-188 and knockdown of LCoR suppressed osteogenic differentiation and induced adipogenic differentiation in mBMSCs. Long noncoding RNA H19 mediates LCoR to regulate the balance between osteogenic and adipogenic differentiation of mBMSCs in mice through sponging miR-188. © 2018 Wiley Periodicals, Inc.

Icariin promotes expression of junctophilin 2 and Ca2+ related function during cardiomyocyte differentiation of murine embryonic stem cells.

PubMed

Liang, Xingguang; Hong, Dongsheng; Huang, Yujie; Rao, Yuefeng; Ma, Kuifen; Huang, Mingzhu; Zhang, Xingguo; Lou, Yijia; Zhao, Qingwei

2015-12-01

Junctophilin2 (JP2) is a critical protein associated with cardiogenesis. Icariin (ICA) facilitated the directional differentiation of murine embryonic stem (ES) cells into cardiomyocytes. However, little is known about the effects of ICA on JP2 during cardiac differentiation. Here, we explored whether ICA has effects on the expression and Ca2+ related function of JP2 during cardiomyocyte differentiation of ES cells in vitro. Embryonid bodies (EBs) formed by hanging drop were treated with 10(-7) mol/L ICA from day 5 to promote the cardiac differentiation. Percentage of beating EBs and number of beating area within EBs were monitored. Cardiomyocytes were purified by discontinuous percoll gradient centrifugation from EBs. The expression of JP2, α-actinin and troponin-T within EBs or isolated cardiomyocytes were analyzed by immunocytochemistry, western blot and flow cytometry. The transient Ca2+ release was characterized in cardiomyocytes treated with/without 10 mmol/L caffeine and 8 mmol/L Ca2+. Our results showed that ES cell-derived cardiomyocytes were well characterized with JP2 proteins. ICA promoted cardiomyocyte differentiation as indicated by an increased percentage of beating EBs and number of beating area within EBs. The expression of JP2, α-actinin and troponin-T were up-regulated both in EBs and isolated cardiomyocytes from EBs. Furthermore, ICA-induced JP2 expression was accompanied by a remarkable increase of the amplitude of Ca2+ transients in cardiomyocytes before/after caffeine and Ca2+ stimulating. In conclusion, ICA promotes in cardiac differentiation partly through regulating JP2 and improved the Ca2+ modulatory function of cardiomyocytes.

Clonal Populations of Amniotic Cells by Dilution and Direct Plating: Evidence for Hidden Diversity

PubMed Central

Wilson, Patricia G.; Devkota, Lorna; Payne, Tiffany; Crisp, Laddie; Winter, Allison; Wang, Zhan

2012-01-01

Fetal cells are widely considered a superior cell source for regenerative medicine; fetal cells show higher proliferative capacity and have undergone fewer replicative cycles that could generate spontaneous mutations. Fetal cells in amniotic fluid were among the first normal primary cells to be cultured ex vivo, but the undefined composition of amniotic fluid has hindered advance for regenerative applications. We first developed a highly efficient method to generate clonal populations by dilution of amniocentesis samples in media and direct plating without intervening refrigeration, centrifugation, or exposure of cells to the paracrine effects in mixed cell cultures. More than 40 clonal populations were recovered from 4 amniocentesis samples and representative clones were characterized by flow cytometry, conventional assays for differentiation potential, immunofluorescence imaging, and transcript analysis. The results revealed previously unreported diversity among stromal and epithelial cell types and identified unique cell types that could be lost or undetected in mixed cell populations. The differentiation potential of amniotic cells proved to be uncoupled from expression of definitive cell surface or cytoplasmic markers for stromal and epithelial cells. Evidence for diversity among stromal and epithelial cells in amniotic fluid bears on interpretations applied to molecular and functional tests of amniotic cell populations. PMID:23024659

Light-mediated polarization of the PIN3 auxin transporter for the phototropic response in Arabidopsis.

PubMed

Ding, Zhaojun; Galván-Ampudia, Carlos S; Demarsy, Emilie; Łangowski, Łukasz; Kleine-Vehn, Jürgen; Fan, Yuanwei; Morita, Miyo T; Tasaka, Masao; Fankhauser, Christian; Offringa, Remko; Friml, Jiří

2011-04-01

Phototropism is an adaptation response, through which plants grow towards the light. It involves light perception and asymmetric distribution of the plant hormone auxin. Here we identify a crucial part of the mechanism for phototropism, revealing how light perception initiates auxin redistribution that leads to directional growth. We show that light polarizes the cellular localization of the auxin efflux carrier PIN3 in hypocotyl endodermis cells, resulting in changes in auxin distribution and differential growth. In the dark, high expression and activity of the PINOID (PID) kinase correlates with apolar targeting of PIN3 to all cell sides. Following illumination, light represses PINOID transcription and PIN3 is polarized specifically to the inner cell sides by GNOM ARF GTPase GEF (guanine nucleotide exchange factor)-dependent trafficking. Thus, differential trafficking at the shaded and illuminated hypocotyl side aligns PIN3 polarity with the light direction, and presumably redirects auxin flow towards the shaded side, where auxin promotes growth, causing hypocotyls to bend towards the light. Our results imply that PID phosphorylation-dependent recruitment of PIN proteins into distinct trafficking pathways is a mechanism to polarize auxin fluxes in response to different environmental and endogenous cues. © 2011 Macmillan Publishers Limited. All rights reserved

Bed particle entrainment and motion in turbulent open-channel flows: a high-resolution experimental study

NASA Astrophysics Data System (ADS)

Nikora, Vladimir; Cameron, Stuart; Amir, Mohammad; Stewart, Mark; Witz, Matthew

2015-04-01

In spite of significant efforts of geoscientists and engineers, the exact mechanics of sediment entrainment and transport by turbulent flows remains unclear and continues to be the focus of many research groups worldwide. The talk outlines current developments in this direction at the University of Aberdeen, where an extensive experimental programme has recently been completed. The experiments were conducted in the Aberdeen Open Channel Facility (AOCF, 20 m long, 1.18 m wide) over wide ranges of flow submergence (1.9-8.0), bulk Reynolds number (4400-83000), and channel aspect ratio (9-39). The flume bed was covered by hexagonally-packed glass beads 16 mm in diameter. For entrainment experiments, selected glass particles were replaced with lighter particles (nylon and delrin). Instantaneous velocity fields before, during, and after entrainment were measured with an advanced multi-mode Particle Image Velocimetry (PIV) system developed by S. Cameron. This system was also used for 3D particle tracking in the entrainment experiments. The main types of experiments included: (1) multi-mode turbulence measurements with fixed-bed conditions to assess the background flow structure (10 min to 120 min duration of velocity records); (2) simultaneous measurements of fluctuating differential pressure acting on 23 fixed particles with in-built pressure sensors, synchronously with PIV; (3) measurements of waiting times for particle entrainment, employing a specially designed system (SMC-1) for automatic placement of the particles on the bed and subsequent measurement of the time before entrainment; (4) long-term direct measurements of the instantaneous drag force acting on a single particle (attached to the bed) at different protrusions, synchronously with PIV; and (5) synchronous measurements of the flow field around a particle before, at, and during entrainment, supplemented with 3D particle tracking. The key results include: (1) the refined turbulence structure of a rough-bed open-channel flow assessed with multiple-order bulk velocity statistics, spectra, correlations, and structure functions; (2) identification and quantification of coherent motions, with particular focus on 'superstructures' (or 'very large scale motions' up to 40 flow depths in length); (3) assessment of secondary current effects on the flow structure; (4) statistical characteristics of fluctuating pressure acting on multiple bed particles, including spatial pressure correlations and their relations to the coherent structures; (5) estimates and statistical tests of waiting time distributions; (6) statistics of particle trajectories with particular focus on the initial stages of motion; and (7) identification of typical flow features accompanying particle entrainment. Among other findings, it has been shown, for the first time, that particle entrainment is likely to be associated with interactions between flow superstructures. The 'collisions' of superstructures, 'meandering' across the flow, generate regions of a particular velocity pattern leading to the particle entrainment. This study was supported by an EPSRC (UK) Grant EP/G056404/1, which was directly linked to DFG (Germany) Grants FR 1593/5-1/2, focus of which was on direct numerical simulations of mobile-bed flows. The authors are grateful to M. Uhlmann and C. Chan-Braun (Karlsruhe Institute of Technology) and J. Frohlich and B. Vowinckel (Dresden Technical University) for their useful suggestions and insightful discussions throughout the course of this project.

What drives the Tibetan crust to the South East Asia? Role of upper mantle density discontinuities as inferred from the continental geoid anomalies

NASA Astrophysics Data System (ADS)

Rajesh, S.

2012-04-01

The Himalaya-Tibet orogen formed as a result of the northward convergence of India into the Asia over the past 55 Ma had caused the north south crustal shortening and Cenozoic upliftment of the Tibetan plateau, which significantly affected the tectonic and climatic framework of the Asia. Geodetic measurements have also shown eastward crustal extrusion of Tibet, especially along major east-southeast strike slip faults at a slip rate of 15-20 mm a-1 and around 40 mm a-1. Such continental scale deformations have been modeled as block rotation by fault boundary stresses developed due to the India-Eurasia collision. However, the Thin Sheet model explained the crustal deformation mechanism by considering varying gravitational potential energy arise out of varying crustal thickness of the viscous lithosphere. The Channel Flow model, which also suggests extrusion is a boundary fault guided flow along the shallow crustal brittle-ductile regime. Although many models have proposed, but no consensus in these models to explain the dynamics of measured surface geodetic deformation of the Tibetan plateau. But what remains conspicuous is the origin of driving forces that cause the observed Tibetan crustal flow towards the South East Asia. Is the crustal flow originated only because of the differential stresses that developed in the shallow crustal brittle-ductile regime? Or should the stress transfer to the shallow crustal layers as a result of gravitational potential energy gradient driven upper mantle flow also to be accounted. In this work, I examine the role of latter in the light of depth distribution of continental geoid anomalies beneath the Himalaya-Tibet across major upper mantle density discontinuities. These discontinuity surfaces in the upper mantle are susceptible to hold the plastic deformation that may occur as a result of the density gradient driven flow. The distribution of geoid anomalies across these density discontinuities at 220, 410 and 660 km depth in the upper mantle beneath the Himalaya-Tibet has been studied by analyzing the geoid undulation data obtained from various satellite geodetic missions along with the recent and old (EGM2008 and EGM2006) Earth Gravity models. Results show that the net geoid anomaly varies from -65 m to -20 m, which signify a density stratified upper mantle beneath the Himalaya-Tibet and the same has been confirmed from the results of regional seismic tomography studies. The density anomaly distribution beneath Tibet from 163 km depth to its upper mantle thickness of 1063 km show a strong NW-SE elliptically oriented positive geoid anomalies of magnitude around 40 meter. Asymmetric density anomaly gradient have been observed along the Himalayan arc from west to east as well as across the arc from north to south. This caused differential gravitational potential gradient and hence an elliptical flow structure of the Tibetan continental mantle along the resultant NW-SE direction, which is in concurrence with the observed present day direction of the Tibetan crustal flow. Thus the geoid anomalies distributed at various depth ranges show how the gradient in the upper mantle gravitational potential energy, especially across the deformed discontinuity surface, is significant in determining the transfer of deviatoric stresses and providing traction to the flow of crustal layers of the Tibetan Plateau. This suggests the viscous flow model could be a preferable choice, which could better accommodate the dynamics of the upper mantle, in explaining the crustal extrusion processes of the Tibetan Plateau.

Algebraic multigrid preconditioners for two-phase flow in porous media with phase transitions [Algebraic multigrid preconditioners for multiphase flow in porous media with phase transitions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bui, Quan M.; Wang, Lu; Osei-Kuffuor, Daniel

Multiphase flow is a critical process in a wide range of applications, including oil and gas recovery, carbon sequestration, and contaminant remediation. Numerical simulation of multiphase flow requires solving of a large, sparse linear system resulting from the discretization of the partial differential equations modeling the flow. In the case of multiphase multicomponent flow with miscible effect, this is a very challenging task. The problem becomes even more difficult if phase transitions are taken into account. A new approach to handle phase transitions is to formulate the system as a nonlinear complementarity problem (NCP). Unlike in the primary variable switchingmore » technique, the set of primary variables in this approach is fixed even when there is phase transition. Not only does this improve the robustness of the nonlinear solver, it opens up the possibility to use multigrid methods to solve the resulting linear system. The disadvantage of the complementarity approach, however, is that when a phase disappears, the linear system has the structure of a saddle point problem and becomes indefinite, and current algebraic multigrid (AMG) algorithms cannot be applied directly. In this study, we explore the effectiveness of a new multilevel strategy, based on the multigrid reduction technique, to deal with problems of this type. We demonstrate the effectiveness of the method through numerical results for the case of two-phase, two-component flow with phase appearance/disappearance. In conclusion, we also show that the strategy is efficient and scales optimally with problem size.« less

Algebraic multigrid preconditioners for two-phase flow in porous media with phase transitions [Algebraic multigrid preconditioners for multiphase flow in porous media with phase transitions

DOE PAGES

Bui, Quan M.; Wang, Lu; Osei-Kuffuor, Daniel

2018-02-06

Multiphase flow is a critical process in a wide range of applications, including oil and gas recovery, carbon sequestration, and contaminant remediation. Numerical simulation of multiphase flow requires solving of a large, sparse linear system resulting from the discretization of the partial differential equations modeling the flow. In the case of multiphase multicomponent flow with miscible effect, this is a very challenging task. The problem becomes even more difficult if phase transitions are taken into account. A new approach to handle phase transitions is to formulate the system as a nonlinear complementarity problem (NCP). Unlike in the primary variable switchingmore » technique, the set of primary variables in this approach is fixed even when there is phase transition. Not only does this improve the robustness of the nonlinear solver, it opens up the possibility to use multigrid methods to solve the resulting linear system. The disadvantage of the complementarity approach, however, is that when a phase disappears, the linear system has the structure of a saddle point problem and becomes indefinite, and current algebraic multigrid (AMG) algorithms cannot be applied directly. In this study, we explore the effectiveness of a new multilevel strategy, based on the multigrid reduction technique, to deal with problems of this type. We demonstrate the effectiveness of the method through numerical results for the case of two-phase, two-component flow with phase appearance/disappearance. In conclusion, we also show that the strategy is efficient and scales optimally with problem size.« less

Oestradiol and progesterone differentially alter cytoskeletal protein expression and flame cell morphology in Taenia crassiceps.

PubMed

Ambrosio, Javier R; Ostoa-Saloma, Pedro; Palacios-Arreola, M Isabel; Ruíz-Rosado, Azucena; Sánchez-Orellana, Pedro L; Reynoso-Ducoing, Olivia; Nava-Castro, Karen E; Martínez-Velázquez, Nancy; Escobedo, Galileo; Ibarra-Coronado, Elizabeth G; Valverde-Islas, Laura; Morales-Montor, Jorge

2014-09-01

We examined the effects of oestradiol (E2) and progesterone (P4) on cytoskeletal protein expression in the helminth Taenia crassiceps - specifically actin, tubulin and myosin. These proteins assemble into flame cells, which constitute the parasite excretory system. Total protein extracts were obtained from E2- and P4-treated T. crassiceps cysticerci and untreated controls, and analysed by one- and two-dimensional protein electrophoresis, flow cytometry, immunofluorescence and videomicroscopy. Exposure of T. crassiceps cysticerci to E2 and P4 induced differential protein expression patterns compared with untreated controls. Changes in actin, tubulin and myosin expression were confirmed by flow cytometry of parasite cells and immunofluorescence. In addition, parasite morphology was altered in response to E2 and P4 versus controls. Flame cells were primarily affected at the level of the ciliary tuft, in association with the changes in actin, tubulin and myosin. We conclude that oestradiol and progesterone act directly on T. crassiceps cysticerci, altering actin, tubulin and myosin expression and thus affecting the assembly and function of flame cells. Our results increase our understanding of several aspects of the molecular crosstalk between host and parasite, which might be useful in designing anthelmintic drugs that exclusively impair parasitic proteins which mediate cell signaling and pathogenic reproduction and establishment. Copyright © 2014 Australian Society for Parasitology Inc. Published by Elsevier Ltd. All rights reserved.

Connecting the large- and the small-scale magnetic fields of solar-like stars

NASA Astrophysics Data System (ADS)

Lehmann, L. T.; Jardine, M. M.; Mackay, D. H.; Vidotto, A. A.

2018-05-01

A key question in understanding the observed magnetic field topologies of cool stars is the link between the small- and the large-scale magnetic field and the influence of the stellar parameters on the magnetic field topology. We examine various simulated stars to connect the small-scale with the observable large-scale field. The highly resolved 3D simulations we used couple a flux transport model with a non-potential coronal model using a magnetofrictional technique. The surface magnetic field of these simulations is decomposed into spherical harmonics which enables us to analyse the magnetic field topologies on a wide range of length scales and to filter the large-scale magnetic field for a direct comparison with the observations. We show that the large-scale field of the self-consistent simulations fits the observed solar-like stars and is mainly set up by the global dipolar field and the large-scale properties of the flux pattern, e.g. the averaged latitudinal position of the emerging small-scale field and its global polarity pattern. The stellar parameters flux emergence rate, differential rotation and meridional flow affect the large-scale magnetic field topology. An increased flux emergence rate increases the magnetic flux in all field components and an increased differential rotation increases the toroidal field fraction by decreasing the poloidal field. The meridional flow affects the distribution of the magnetic energy across the spherical harmonic modes.

A numerical study of transient heat and mass transfer in crystal growth

NASA Technical Reports Server (NTRS)

Han, Samuel Bang-Moo

1987-01-01

A numerical analysis of transient heat and solute transport across a rectangular cavity is performed. Five nonlinear partial differential equations which govern the conservation of mass, momentum, energy and solute concentration related to crystal growth in solution, are simultaneously integrated by a numerical method based on the SIMPLE algorithm. Numerical results showed that the flow, temperature and solute fields are dependent on thermal and solutal Grashoff number, Prandtl number, Schmidt number and aspect ratio. The average Nusselt and Sherwood numbers evaluated at the center of the cavity decrease markedly when the solutal buoyancy force acts in the opposite direction to the thermal buoyancy force. When the solutal and thermal buoyancy forces act in the same direction, however, Sherwood number increases significantly and yet Nusselt number decreases. Overall effects of convection on the crystal growth are seen to be an enhancement of growth rate as expected but with highly nonuniform spatial growth variations.

Discrimination of Swiss cheese from 5 different factories by high impact volatile organic compound profiles determined by odor activity value using selected ion flow tube mass spectrometry and odor threshold.

PubMed

Taylor, Kaitlyn; Wick, Cheryl; Castada, Hardy; Kent, Kyle; Harper, W James

2013-10-01

Swiss cheese contains more than 200 volatile organic compounds (VOCs). Gas chromatography-mass spectrometry has been utilized for the analysis of volatile compounds in food products; however, it is not sensitive enough to measure VOCs directly in the headspace of a food at low concentrations. Selected ion flow tube mass spectrometry (SIFT-MS) provides a basis for determining the concentrations of VOCs in the head space of the sample in real time at low concentration levels of parts per billion/trillion by volume. Of the Swiss cheese VOCs, relatively few have a major impact on flavor quality. VOCs with odor activity values (OAVs) (concentration/odor threshold) greater than one are considered high-impact flavor compounds. The objective of this study was to utilize SIFT-MS concentrations in conjunction with odor threshold values to determine OAVs thereby identifying high-impact VOCs to use for differentiating Swiss cheese from five factories and identify the factory variability. Seventeen high-impact VOCs were identified for Swiss cheese based on an OAV greater than one in at least 1 of the 5 Swiss cheese factories. Of these, 2,3-butanedione was the only compound with significantly different OAVs in all factories; however, cheese from any pair of factories had multiple statistically different compounds based on OAV. Principal component analysis using soft independent modeling of class analogy statistical differentiation plots, with all of the OAVs, showed differentiation between the 5 factories. Overall, Swiss cheese from different factories was determined to have different OAV profiles utilizing SIFT-MS to determine OAVs of high impact compounds. © 2013 Institute of Food Technologists®

Exact self-similarity solution of the Navier-Stokes equations for a porous channel with orthogonally moving walls

NASA Astrophysics Data System (ADS)

Dauenhauer, Eric C.; Majdalani, Joseph

2003-06-01

This article describes a self-similarity solution of the Navier-Stokes equations for a laminar, incompressible, and time-dependent flow that develops within a channel possessing permeable, moving walls. The case considered here pertains to a channel that exhibits either injection or suction across two opposing porous walls while undergoing uniform expansion or contraction. Instances of direct application include the modeling of pulsating diaphragms, sweat cooling or heating, isotope separation, filtration, paper manufacturing, irrigation, and the grain regression during solid propellant combustion. To start, the stream function and the vorticity equation are used in concert to yield a partial differential equation that lends itself to a similarity transformation. Following this similarity transformation, the original problem is reduced to solving a fourth-order differential equation in one similarity variable η that combines both space and time dimensions. Since two of the four auxiliary conditions are of the boundary value type, a numerical solution becomes dependent upon two initial guesses. In order to achieve convergence, the governing equation is first transformed into a function of three variables: The two guesses and η. At the outset, a suitable numerical algorithm is applied by solving the resulting set of twelve first-order ordinary differential equations with two unspecified start-up conditions. In seeking the two unknown initial guesses, the rapidly converging inverse Jacobian method is applied in an iterative fashion. Numerical results are later used to ascertain a deeper understanding of the flow character. The numerical scheme enables us to extend the solution range to physical settings not considered in previous studies. Moreover, the numerical approach broadens the scope to cover both suction and injection cases occurring with simultaneous wall motion.

Role of Interaction between Magnetic Rossby Waves and Tachocline Differential Rotation in Producing Solar Seasons

NASA Astrophysics Data System (ADS)

Dikpati, Mausumi; McIntosh, Scott W.; Bothun, Gregory; Cally, Paul S.; Ghosh, Siddhartha S.; Gilman, Peter A.; Umurhan, Orkan M.

2018-02-01

We present a nonlinear magnetohydrodynamic shallow-water model for the solar tachocline (MHD-SWT) that generates quasi-periodic tachocline nonlinear oscillations (TNOs) that can be identified with the recently discovered solar “seasons.” We discuss the properties of the hydrodynamic and magnetohydrodynamic Rossby waves that interact with the differential rotation and toroidal fields to sustain these oscillations, which occur due to back-and-forth energy exchanges among potential, kinetic, and magnetic energies. We perform model simulations for a few years, for selected example cases, in both hydrodynamic and magnetohydrodynamic regimes and show that the TNOs are robust features of the MHD-SWT model, occurring with periods of 2–20 months. We find that in certain cases multiple unstable shallow-water modes govern the dynamics, and TNO periods vary with time. In hydrodynamically governed TNOs, the energy exchange mechanism is simple, occurring between the Rossby waves and differential rotation. But in MHD cases, energy exchange becomes much more complex, involving energy flow among six energy reservoirs by means of eight different energy conversion processes. For toroidal magnetic bands of 5 and 35 kG peak amplitudes, both placed at 45° latitude and oppositely directed in north and south hemispheres, we show that the energy transfers responsible for TNO, as well as westward phase propagation, are evident in synoptic maps of the flow, magnetic field, and tachocline top-surface deformations. Nonlinear mode–mode interaction is particularly dramatic in the strong-field case. We also find that the TNO period increases with a decrease in rotation rate, implying that the younger Sun had more frequent seasons.

Modelling groundwater fractal flow with fractional differentiation via Mittag-Leffler law

NASA Astrophysics Data System (ADS)

Ahokposi, D. P.; Atangana, Abdon; Vermeulen, D. P.

2017-04-01

Modelling the flow of groundwater within a network of fractures is perhaps one of the most difficult exercises within the field of geohydrology. This physical problem has attracted the attention of several scientists across the globe. Already two different types of differentiations have been used to attempt modelling this problem including the classical and the fractional differentiation. In this paper, we employed the most recent concept of differentiation based on the non-local and non-singular kernel called the generalized Mittag-Leffler function, to reshape the model of groundwater fractal flow. We presented the existence of positive solution of the new model. Using the fixed-point approach, we established the uniqueness of the positive solution. We solve the new model with three different numerical schemes including implicit, explicit and Crank-Nicholson numerical methods. Experimental data collected from four constant discharge tests conducted in a typical fractured crystalline rock aquifer of the Northern Limb (Bushveld Complex) in the Limpopo Province (South Africa) are compared with the numerical solutions. It is worth noting that the four boreholes (BPAC1, BPAC2, BPAC3, and BPAC4) are located on Faults.

Computer simulation of two-dimensional unsteady flows in estuaries and embayments by the method of characteristics : basic theory and the formulation of the numerical method

USGS Publications Warehouse

Lai, Chintu

1977-01-01

Two-dimensional unsteady flows of homogeneous density in estuaries and embayments can be described by hyperbolic, quasi-linear partial differential equations involving three dependent and three independent variables. A linear combination of these equations leads to a parametric equation of characteristic form, which consists of two parts: total differentiation along the bicharacteristics and partial differentiation in space. For its numerical solution, the specified-time-interval scheme has been used. The unknown, partial space-derivative terms can be eliminated first by suitable combinations of difference equations, converted from the corresponding differential forms and written along four selected bicharacteristics and a streamline. Other unknowns are thus made solvable from the known variables on the current time plane. The computation is carried to the second-order accuracy by using trapezoidal rule of integration. Means to handle complex boundary conditions are developed for practical application. Computer programs have been written and a mathematical model has been constructed for flow simulation. The favorable computer outputs suggest further exploration and development of model worthwhile. (Woodard-USGS)

Mechanical Strain Determines Cilia Length, Motility, and Planar Position in the Left-Right Organizer.

PubMed

Chien, Yuan-Hung; Srinivasan, Shyam; Keller, Ray; Kintner, Chris

2018-05-07

The Xenopus left-right organizer (LRO) breaks symmetry along the left-right axis of the early embryo by producing and sensing directed ciliary flow as a patterning cue. To carry out this process, the LRO contains different ciliated cell types that vary in cilia length, whether they are motile or sensory, and how they position their cilia along the anterior-posterior (A-P) planar axis. Here, we show that these different cilia features are specified in the prospective LRO during gastrulation, based on anisotropic mechanical strain that is oriented along the A-P axis, and graded in levels along the medial-lateral axis. Strain instructs ciliated cell differentiation by acting on a mesodermal prepattern present at blastula stages, involving foxj1. We propose that differential strain is a graded, developmental cue, linking the establishment of an A-P planar axis to cilia length, motility, and planar location during formation of the Xenopus LRO. Copyright © 2018 Elsevier Inc. All rights reserved.

MHD stagnation-point flow over a nonlinearly shrinking sheet with suction effect

NASA Astrophysics Data System (ADS)

Awaludin, Izyan Syazana; Ahmad, Rokiah; Ishak, Anuar

2018-04-01

The stagnation point flow over a shrinking permeable sheet in the existence of magnetic field is numerically investigated in this paper. The system of partial differential equations are transformed to a nonlinear ordinary differential equation using similarity transformation and is solved numerically using the boundary value problem solver, bvp4c, in Matlab software. It is found that dual solutions exist for a certain range of the shrinking strength.

Influence of nonlinear thermal radiation and viscous dissipation on three-dimensional flow of Jeffrey nano fluid over a stretching sheet in the presence of Joule heating

NASA Astrophysics Data System (ADS)

Ganesh Kumar, K.; Rudraswamy, N. G.; Gireesha, B. J.; Krishnamurthy, M. R.

2017-09-01

Present exploration discusses the combined effect of viscous dissipation and Joule heating on three dimensional flow and heat transfer of a Jeffrey nanofluid in the presence of nonlinear thermal radiation. Here the flow is generated over bidirectional stretching sheet in the presence of applied magnetic field by accounting thermophoresis and Brownian motion of nanoparticles. Suitable similarity transformations are employed to reduce the governing partial differential equations into coupled nonlinear ordinary differential equations. These nonlinear ordinary differential equations are solved numerically by using the Runge-Kutta-Fehlberg fourth-fifth order method with shooting technique. Graphically results are presented and discussed for various parameters. Validation of the current method is proved by comparing our results with the existing results under limiting situations. It can be concluded that combined effect of Joule and viscous heating increases the temperature profile and thermal boundary layer thickness.

Sensitivity derivatives for advanced CFD algorithm and viscous modelling parameters via automatic differentiation

NASA Technical Reports Server (NTRS)

Green, Lawrence L.; Newman, Perry A.; Haigler, Kara J.

1993-01-01

The computational technique of automatic differentiation (AD) is applied to a three-dimensional thin-layer Navier-Stokes multigrid flow solver to assess the feasibility and computational impact of obtaining exact sensitivity derivatives typical of those needed for sensitivity analyses. Calculations are performed for an ONERA M6 wing in transonic flow with both the Baldwin-Lomax and Johnson-King turbulence models. The wing lift, drag, and pitching moment coefficients are differentiated with respect to two different groups of input parameters. The first group consists of the second- and fourth-order damping coefficients of the computational algorithm, whereas the second group consists of two parameters in the viscous turbulent flow physics modelling. Results obtained via AD are compared, for both accuracy and computational efficiency with the results obtained with divided differences (DD). The AD results are accurate, extremely simple to obtain, and show significant computational advantage over those obtained by DD for some cases.

Regolith and Environment Science and Oxygen and Lunar Volatile Extraction (RESOLVE): Lunar Advanced Volatile Analysis (LAVA) Capillary Fluid Dynamic Restriction Effects on Gas Chromatography

NASA Technical Reports Server (NTRS)

Gonzalez, Marianne; Quinn, Jacqueline; Captain, Janine; Santiago-Bond, Josephine; Starr, Stanley

2015-01-01

The Resource Prospector (RP) mission with the Regolith and Environment Science and Oxygen Lunar Volatile Extraction (RESOLVE) payload aims to show the presence of water in lunar regolith, and establish a proving ground for NASAs mission to Mars. One of the analysis is performed by the Lunar Advanced Volatiles Analysis (LAVA) subsystem, which consists of a fluid network that facilitates the transport of volatile samples to a gas chromatograph and mass spectrometer (GC-MS) instrument. The understanding of fluid dynamics directed from the GC to the MS is important due to the influence of flow rates and pressures that affect the accuracy of and prevent the damage to the overall GC-MS instrument. The micro-scale capillary fluid network within the GC alone has various lengths and inner-diameters; therefore, determination of pressure differentials and flow rates are difficult to model computationally, with additional complexity from the vacuum conditions in space and lack of a lunar atmosphere. A series of tests were performed on an experimental set-up of the system where the inner diameters of the GC transfer line connecting to the MS were varied. The effect on chromatography readings were also studied by applying these lines onto a GC instrument. It was found that a smaller inner diameter transfer line resulted in a lower flow rate, as well as a lower pressure differential across the thermal conductivity detector (TCD) unit of the GC and a negligible pressure drop across the mock-up capillary column. The chromatography was affected with longer retention times and broader peak integrations. It was concluded that a 0.050 mm inner diameter line still proved most suitable for the systems flow rate preferences. In addition, it was evident that this small transfer line portrayed some expense to GC signal characteristics and the wait time for steady-state operation.

Signatures of inflammation and impending multiple organ dysfunction in the hyperacute phase of trauma: A prospective cohort study

PubMed Central

Longhi, M. Paula; Hoti, Mimoza; Patel, Minal B.; O’Dwyer, Michael; Nourshargh, Sussan; Barnes, Michael R.; Brohi, Karim

2017-01-01

Background Severe trauma induces a widespread response of the immune system. This “genomic storm” can lead to poor outcomes, including Multiple Organ Dysfunction Syndrome (MODS). MODS carries a high mortality and morbidity rate and adversely affects long-term health outcomes. Contemporary management of MODS is entirely supportive, and no specific therapeutics have been shown to be effective in reducing incidence or severity. The pathogenesis of MODS remains unclear, and several models are proposed, such as excessive inflammation, a second-hit insult, or an imbalance between pro- and anti-inflammatory pathways. We postulated that the hyperacute window after trauma may hold the key to understanding how the genomic storm is initiated and may lead to a new understanding of the pathogenesis of MODS. Methods and findings We performed whole blood transcriptome and flow cytometry analyses on a total of 70 critically injured patients (Injury Severity Score [ISS] ≥ 25) at The Royal London Hospital in the hyperacute time period within 2 hours of injury. We compared transcriptome findings in 36 critically injured patients with those of 6 patients with minor injuries (ISS ≤ 4). We then performed flow cytometry analyses in 34 critically injured patients and compared findings with those of 9 healthy volunteers. Immediately after injury, only 1,239 gene transcripts (4%) were differentially expressed in critically injured patients. By 24 hours after injury, 6,294 transcripts (21%) were differentially expressed compared to the hyperacute window. Only 202 (16%) genes differentially expressed in the hyperacute window were still expressed in the same direction at 24 hours postinjury. Pathway analysis showed principally up-regulation of pattern recognition and innate inflammatory pathways, with down-regulation of adaptive responses. Immune deconvolution, flow cytometry, and modular analysis suggested a central role for neutrophils and Natural Killer (NK) cells, with underexpression of T- and B cell responses. In the transcriptome cohort, 20 critically injured patients later developed MODS. Compared with the 16 patients who did not develop MODS (NoMODS), maximal differential expression was seen within the hyperacute window. In MODS versus NoMODS, 363 genes were differentially expressed on admission, compared to only 33 at 24 hours postinjury. MODS transcripts differentially expressed in the hyperacute window showed enrichment among diseases and biological functions associated with cell survival and organismal death rather than inflammatory pathways. There was differential up-regulation of NK cell signalling pathways and markers in patients who would later develop MODS, with down-regulation of neutrophil deconvolution markers. This study is limited by its sample size, precluding more detailed analyses of drivers of the hyperacute response and different MODS phenotypes, and requires validation in other critically injured cohorts. Conclusions In this study, we showed how the hyperacute postinjury time window contained a focused, specific signature of the response to critical injury that led to widespread genomic activation. A transcriptomic signature for later development of MODS was present in this hyperacute window; it showed a strong signal for cell death and survival pathways and implicated NK cells and neutrophil populations in this differential response. PMID:28715416

Effect of homogenous-heterogeneous reactions on MHD Prandtl fluid flow over a stretching sheet

NASA Astrophysics Data System (ADS)

Khan, Imad; Malik, M. Y.; Hussain, Arif; Salahuddin, T.

An analysis is performed to explore the effects of homogenous-heterogeneous reactions on two-dimensional flow of Prandtl fluid over a stretching sheet. In present analysis, we used the developed model of homogeneous-heterogeneous reactions in boundary layer flow. The mathematical configuration of presented flow phenomenon yields the nonlinear partial differential equations. Using scaling transformations, the governing partial differential equations (momentum equation and homogenous-heterogeneous reactions equations) are transformed into non-linear ordinary differential equations (ODE's). Then, resulting non-linear ODE's are solved by computational scheme known as shooting method. The quantitative and qualitative manners of concerned physical quantities (velocity, concentration and drag force coefficient) are examined under prescribed physical constrained through figures and tables. It is observed that velocity profile enhances verses fluid parameters α and β while Hartmann number reduced it. The homogeneous and heterogeneous reactions parameters have reverse effects on concentration profile. Concentration profile shows retarding behavior for large values of Schmidt number. Skin fraction coefficient enhances with increment in Hartmann number H and fluid parameter α .

Generating induced pluripotent stem cell derived endothelial cells and induced endothelial cells for cardiovascular disease modelling and therapeutic angiogenesis.

PubMed

Clayton, Z E; Sadeghipour, S; Patel, S

2015-10-15

Standard therapy for atherosclerotic coronary and peripheral arterial disease is insufficient in a significant number of patients because extensive disease often precludes effective revascularization. Stem cell therapy holds promise as a supplementary treatment for these patients, as pre-clinical and clinical research has shown transplanted cells can promote angiogenesis via direct and paracrine mechanisms. Induced pluripotent stem cells (iPSCs) are a novel cell type obtained by reprogramming somatic cells using exogenous transcription factor cocktails, which have been introduced to somatic cells via viral or plasmid constructs, modified mRNA or small molecules. IPSCs are now being used in disease modelling and drug testing and are undergoing their first clinical trial, but despite recent advances, the inefficiency of the reprogramming process remains a major limitation, as does the lack of consensus regarding the optimum transcription factor combination and delivery method and the uncertainty surrounding the genetic and epigenetic stability of iPSCs. IPSCs have been successfully differentiated into vascular endothelial cells (iPSC-ECs) and, more recently, induced endothelial cells (iECs) have also been generated by direct differentiation, which bypasses the pluripotent intermediate. IPSC-ECs and iECs demonstrate endothelial functionality in vitro and have been shown to promote neovessel growth and enhance blood flow recovery in animal models of myocardial infarction and peripheral arterial disease. Challenges remain in optimising the efficiency, safety and fidelity of the reprogramming and endothelial differentiation processes and establishing protocols for large-scale production of clinical-grade, patient-derived cells. Copyright © 2015 Elsevier Ireland Ltd. All rights reserved.

Evaluation of wind regimes and their impact on vertical mixing and coupling in a moderately dense forest

NASA Astrophysics Data System (ADS)

Wunder, Tobias; Ehrnsperger, Laura; Thomas, Christoph

2017-04-01

In the last decades much attention has been devoted to improving our understanding of organized motions in plant canopies. Particularly the impact of coherent structures on turbulent flows and vertical mixing in near-neutral conditions has been the focus of many experimental and modeling studies. Despite this progress, the weak-wind subcanopy airflow in concert with stable or weak-wind above-canopy conditions remains poorly understood. In these conditions, evidence is mounting that larger-scale motions, so called sub-meso motions which occupy time scales from minutes to hours and spatial scales from tens of meters to kilometers, dominate transport and turbulent mixing particularly in the subcanopy, because of generally weaker background flow as a result of the enhanced friction due to the plant material. We collected observations from a network of fast-response sensor across the vertical and horizontal dimensions during the INTRAMIX experiment at the Fluxnet site Waldstein/ Weidenbrunnen (DE-Bay) in a moderately dense Norway spruce (Picea Abies) forest over a period of ten weeks. Its main goal was to investigate the role of the submeso-structures on the turbulent wind field and the mixing mechanisms including coherent structures. In a first step, coupling regimes differentiating between weak and strong flows and day- and nighttime-conditions are determined. Subsequently, each of the regimes is analyzed for its dominant flow dynamics identified by wavelet analysis. It is hypothesized that strong vertical wind directional shear does not necessarily indicate a decoupling of vertical layers, but on the contrary may create situations of significant coupling of the sub-canopy with the canopy layers above. Moreover, rapid changes of wind direction or even reversals may generate substantial turbulence and induce intermittent coupling on a variety of time scales. The overarching goal is to improve diagnostics for vertical mixing in plant canopies incorporating turbulence and submeso-motions and to develop a classification of flow modes capable of representing the main driving mechanisms of mixing in forest canopies.

Multiphase flow experiments, mathematical modeling and numerical simulation of the water - gas - solute movement

NASA Astrophysics Data System (ADS)

Li, Y.; Ma, X.; Su, N.

2013-12-01

The movement of water and solute into and through the vadose zone is, in essence, an issue of immiscible displacement in pore-space network of a soil. Therefore, multiphase flow and transport in porous media, referring to three medium: air, water, and the solute, pose one of the largest unresolved challenges for porous medium fluid seepage. However, this phenomenon has always been largely neglected. It is expected that a reliable analysis model of the multi-phase flow in soil can truly reflect the process of natural movement about the infiltration, which is impossible to be observed directly. In such cases, geophysical applications of the nuclear magnetic resonance (NMR) provides the opportunity to measure the water movements into soils directly over a large scale from tiny pore to regional scale, accordingly enable it available both on the laboratory and on the field. In addition, the NMR provides useful information about the pore space properties. In this study, we proposed both laboratory and field experiments to measure the multi-phase flow parameters, together with optimize the model in computer programming based on the fractional partial differential equations (fPDE). In addition, we establish, for the first time, an infiltration model including solute flowing with water, which has huge influence on agriculture and soil environment pollution. Afterwards, with data collected from experiments, we simulate the model and analyze the spatial variability of parameters. Simulations are also conducted according to the model to evaluate the effects of airflow on water infiltration and other effects such as solute and absorption. It has significant meaning to oxygen irrigation aiming to higher crop yield, and shed more light into the dam slope stability. In summary, our framework is a first-time model added in solute to have a mathematic analysis with the fPDE and more instructive to agriculture activities.

Numerical solution of second order ODE directly by two point block backward differentiation formula

NASA Astrophysics Data System (ADS)

Zainuddin, Nooraini; Ibrahim, Zarina Bibi; Othman, Khairil Iskandar; Suleiman, Mohamed; Jamaludin, Noraini

2015-12-01

Direct Two Point Block Backward Differentiation Formula, (BBDF2) for solving second order ordinary differential equations (ODEs) will be presented throughout this paper. The method is derived by differentiating the interpolating polynomial using three back values. In BBDF2, two approximate solutions are produced simultaneously at each step of integration. The method derived is implemented by using fixed step size and the numerical results that follow demonstrate the advantage of the direct method as compared to the reduction method.

Spatial Genetic Structure and Mitochondrial DNA Phylogeography of Argentinean Populations of the Grasshopper Dichroplus elongatus

PubMed Central

Rosetti, Natalia; Remis, Maria Isabel

2012-01-01

Many grasshopper species are considered of agronomical importance because they cause damage to pastures and crops. Comprehension of pest population dynamics requires a clear understanding of the genetic diversity and spatial structure of populations. In this study we report on patterns of genetic variation in the South American grasshopper Dichroplus elongatus which is an agricultural pest of crops and forage grasses of great economic significance in Argentina. We use Direct Amplification of Minisatellite Regions (DAMD) and partial sequences of the cytochrome oxydase 1 (COI) mitochondrial gene to investigate intraspecific structure, demographic history and gene flow patterns in twenty Argentinean populations of this species belonging to different geographic and biogeographic regions. DAMD data suggest that, although genetic drift and migration occur within and between populations, measurable relatedness among neighbouring populations declines with distance and dispersal over distances greater than 200 km is not typical, whereas effective gene flow may occur for populations separated by less than 100 km. Landscape analysis was useful to detect genetic discontinuities associated with environmental heterogeneity reflecting the changing agroecosystem. The COI results indicate the existence of strong genetic differentiation between two groups of populations located at both margins of the Paraná River which became separated during climate oscillations of the Middle Pleistocene, suggesting a significant restriction in effective dispersion mediated by females and large scale geographic differentiation. The number of migrants between populations estimated through mitochondrial and DAMD markers suggest that gene flow is low prompting a non-homogeneous spatial structure and justifying the variation through space. Moreover, the genetic analysis of both markers allows us to conclude that males appear to disperse more than females, reducing the chance of the genetic loss associated with recent anthropogenic fragmentation of the D. elongatus studied range. PMID:22859953

AnalyzeHOLE - An Integrated Wellbore Flow Analysis Tool

USGS Publications Warehouse

Halford, Keith

2009-01-01

Conventional interpretation of flow logs assumes that hydraulic conductivity is directly proportional to flow change with depth. However, well construction can significantly alter the expected relation between changes in fluid velocity and hydraulic conductivity. Strong hydraulic conductivity contrasts between lithologic intervals can be masked in continuously screened wells. Alternating intervals of screen and blank casing also can greatly complicate the relation between flow and hydraulic properties. More permeable units are not necessarily associated with rapid fluid-velocity increases. Thin, highly permeable units can be misinterpreted as thick and less permeable intervals or not identified at all. These conditions compromise standard flow-log interpretation because vertical flow fields are induced near the wellbore. AnalyzeHOLE, an integrated wellbore analysis tool for simulating flow and transport in wells and aquifer systems, provides a better alternative for simulating and evaluating complex well-aquifer system interaction. A pumping well and adjacent aquifer system are simulated with an axisymmetric, radial geometry in a two-dimensional MODFLOW model. Hydraulic conductivities are distributed by depth and estimated with PEST by minimizing squared differences between simulated and measured flows and drawdowns. Hydraulic conductivity can vary within a lithology but variance is limited with regularization. Transmissivity of the simulated system also can be constrained to estimates from single-well, pumping tests. Water-quality changes in the pumping well are simulated with simple mixing models between zones of differing water quality. These zones are differentiated by backtracking thousands of particles from the well screens with MODPATH. An Excel spreadsheet is used to interface the various components of AnalyzeHOLE by (1) creating model input files, (2) executing MODFLOW, MODPATH, PEST, and supporting FORTRAN routines, and (3) importing and graphically displaying pertinent results.

Magmatic structures in the Krkonoše Jizera Plutonic Complex, Bohemian Massif: evidence for localized multiphase flow and small-scale thermal mechanical instabilities in a granitic magma chamber

NASA Astrophysics Data System (ADS)

Žák, Jiří; Klomínský, Josef

2007-08-01

The present paper examines magmatic structures in the Jizera and Liberec granites of the Krkonoše-Jizera Plutonic Complex, Bohemian Massif. The magmatic structures are here interpreted to preserve direct field evidence for highly localized magma flow and other processes in crystal-rich mushes, and to capture the evolution of physical processes in an ancient granitic magma chamber. We propose that after chamber-wide mixing and hybridization, as suggested by recent petrological studies, laminar magma flow became highly localized to weaker channel-like domains within the higher-strength crystal framework. Mafic schlieren formed at flow rims, and their formation presumably involved gravitational settling and velocity gradient flow sorting coupled with interstitial melt escape. Local thermal or compositional convection may have resulted in the formation of vertical schlieren tubes and ladder dikes whereas subhorizontal tubes or channels formed during flow driven by lateral gradients in magma pressure. After the cessation or deceleration of channel flow, gravity-driven processes (settling of crystals and enclaves, gravitational differentiation, development of downward dripping instabilities), accompanied by compaction, filter pressing and melt segregation, dominated in the crystal mush within the flow channels. Subsequently, magmatic folds developed in schlieren layers and the magma chamber recorded complex, late magmatic strains at high magma crystallinities. Late-stage magma pulsing into localized submagmatic cracks represents the latest events of magmatic history of the chamber prior to its final crystallization. We emphasize that the most favorable environments for the formation and preservation of magmatic structures, such as those hosted in the Jizera and Liberec granites, are slowly cooling crystal-rich mushes. Therefore, where preserved in plutons, these structures may lend strong support for a "mush model" of magmatic systems.

Morphometric Analysis and Delineation of Debris Flow Susceptible Alluvial Fans in the Philippines after the 2015 Koppu and Melor Typhoon Events

NASA Astrophysics Data System (ADS)

Llanes, F.; Rodolfo, K. S.; Lagmay, A. M. A.

2017-12-01

On 17 October 2015, Typhoon Koppu brought heavy rains that generated debris flows in the municipalities of Bongabon, Laur, and Gabaldon in Nueva Ecija province. Roughly two months later on 15 December, Typhoon Melor made landfall in the province of Oriental Mindoro, bringing heavy rains that also generated debris flows in multiple watersheds in the municipality of Baco. Despite not being in the direct path of the typhoon, debris flows were triggered in Bongabon, Gabaldon, and Laur, whereas old debris-flow deposits were remobilized in Dingalan, a coastal town in Aurora province adjacent to Gabaldon. During the onslaught of Typhoons Koppu and Melor, landslides of rock, soil, and debris converged in the mountain stream networks where they were remobilized into debris flows that destroyed numerous houses and structures situated on alluvial fans. Satellite images before and after the two typhoons were compared to calculate the deposit extents on the fans and to determine the number and extent of landslides on each watershed. The affected alluvial fans were investigated in the field to determine whether they are debris flow or flood-prone, using a set of established geomorphic and sedimentary characteristics that differentiate deposits of the two processes. Melton ratio, watershed length, and other significant morphometric indices were calculated and analyzed for the affected watersheds using geographic information system (GIS) and high-resolution digital terrain models. A GIS model that can delineate debris flow susceptible alluvial fans in the Philippines was derived and developed from the analysis. Limitations of the model are discussed, as well as recommendations to improve and refine it.

Flowing water affects fish fast-starts: escape performance of the Hawaiian stream goby, Sicyopterus stimpsoni.

PubMed

Diamond, Kelly M; Schoenfuss, Heiko L; Walker, Jeffrey A; Blob, Richard W

2016-10-01

Experimental measurements of escape performance in fishes have typically been conducted in still water; however, many fishes inhabit environments with flow that could impact escape behavior. We examined the influences of flow and predator attack direction on the escape behavior of fish, using juveniles of the amphidromous Hawaiian goby Sicyopterus stimpsoni In nature, these fish must escape ambush predation while moving through streams with high-velocity flow. We measured the escape performance of juvenile gobies while exposing them to a range of water velocities encountered in natural streams and stimulating fish from three different directions. Frequency of response across treatments indicated strong effects of flow conditions and attack direction. Juvenile S. stimpsoni had uniformly high response rates for attacks from a caudal direction (opposite flow); however, response rates for attacks from a cranial direction (matching flow) decreased dramatically as flow speed increased. Mechanical stimuli produced by predators attacking in the same direction as flow might be masked by the flow environment, impairing the ability of prey to detect attacks. Thus, the likelihood of successful escape performance in fishes can depend critically on environmental context. © 2016. Published by The Company of Biologists Ltd.

The mutual causality analysis between the stock and futures markets

NASA Astrophysics Data System (ADS)

Yao, Can-Zhong; Lin, Qing-Wen

2017-07-01

In this paper we employ the conditional Granger causality model to estimate the information flow, and find that the improved model outperforms the Granger causality model in revealing the asymmetric correlation between stocks and futures in the Chinese market. First, we find that information flows estimated by Granger causality tests from futures to stocks are greater than those from stocks to futures. Additionally, average correlation coefficients capture some important characteristics between stock prices and information flows over time. Further, we find that direct information flows estimated by conditional Granger causality tests from stocks to futures are greater than those from futures to stocks. Besides, the substantial increases of information flows and direct information flows exhibit a certain degree of synchronism with the occurrences of important events. Finally, the comparative analysis with the asymmetric ratio and the bootstrap technique demonstrates the slight asymmetry of information flows and the significant asymmetry of direct information flows. It reveals that the information flows from futures to stocks are slightly greater than those in the reverse direction, while the direct information flows from stocks to futures are significantly greater than those in the reverse direction.

Transient versus long-term strength of the "dry" lower continental crust (Musgrave Ranges, Central Australia)

NASA Astrophysics Data System (ADS)

Mancktelow, Neil; Hawemann, Friedrich; Wex, Sebastian; Pennacchioni, Giorgio; Camacho, Alfredo

2017-04-01

One-dimensional yield strength envelope or "Christmas tree" models for the strength of the continental lithosphere assume homogeneous deformation at constant strain-rate and generally predict that felsic lower crust should be viscous and relatively weak. Over the longer term, distributed flow of this supposedly weak lower crust should tend to flatten any irregularities in the Moho. However, these model predictions are in direct contradiction to observations from the well-exposed lower-crustal Fregon Subdomain in the Musgrave Ranges, Central Australia. This unit underwent dehydrating granulite facies metamorphism during the ca. 1200 Ma Musgravian Orogeny. During the subsequent Petermann Orogeny (ca. 550 Ma), these effectively "dry" rocks were very heterogeneously deformed under sub-eclogitic, lower-crustal conditions (ca. 650°C, 1.2 GPa). Shear zones localized over a wide range of thickness and length scales, from mm to km. Widespread and repeated fracturing and pseudotachylyte generation also occurred during the same deformation event, providing weak and approximately planar precursors on which viscous shear zones subsequently localized. On the lithospheric scale, the present day Moho still preserves an offset on the order of 20 km that was caused by the Petermann Orogeny. Brittle fracturing of dry rocks and related pseudotachylyte formation at pressures of ca. 1.2 GPa imply high differential stresses on the order of 1 GPa, if the Mohr-Coulomb yield criterion is still approximately correct at such high confining pressure. High stresses, at least transiently, are also implied by the observed local fracturing of granulite-facies garnets in the vicinity of pseudotachylytes. However, the stress associated with slower crystal-plastic flow appears to be much less, on the order of 10's of MPa, as indicated by the dynamically recrystallized grain size of quartz. Several other observations also indicate that the long-term viscous strength could not have been maintained at GPa levels: (1) viscous reactivation of fractures that are highly misoriented, with planes at a large angle to the shortening direction; (2) the lack of any discernible pressure difference between doleritic dykes oriented at varying angles to the shortening direction (i.e. no tectonic overpressure or underpressure effects); and (3) the lack of evident long-term shear heating on major shear zones. The implication is that the high differential stress must have occurred as transient pulses, causing repeated seismic fracturing of lower crustal rocks that on the longer term were deforming by crystal-plastic viscous creep at much lower differential stress.

Conference on Complex Turbulent Flows: Comparison of Computation and Experiment, Stanford University, Stanford, CA, September 14-18, 1981, Proceedings. Volume 2 - Taxonomies, reporters' summaries, evaluation, and conclusions

NASA Technical Reports Server (NTRS)

Kline, S. J. (Editor); Cantwell, B. J. (Editor); Lilley, G. M.

1982-01-01

Computational techniques for simulating turbulent flows were explored, together with the results of experimental investigations. Particular attention was devoted to the possibility of defining a universal closure model, applicable for all turbulence situations; however, conclusions were drawn that zonal models, describing localized structures, were the most promising techniques to date. The taxonomy of turbulent flows was summarized, as were algebraic, differential, integral, and partial differential methods for numerical depiction of turbulent flows. Numerous comparisons of theoretically predicted and experimentally obtained data for wall pressure distributions, velocity profiles, turbulent kinetic energy profiles, Reynolds shear stress profiles, and flows around transonic airfoils were presented. Simplifying techniques for reducing the necessary computational time for modeling complex flowfields were surveyed, together with the industrial requirements and applications of computational fluid dynamics techniques.

Extending Human Hematopoietic Stem Cell Survival In Vitro with Adipocytes

PubMed Central

Glettig, Dean Liang

2013-01-01

Abstract Human hematopoietic stem cells (hHSCs) cannot be maintained in vitro for extended time periods because they rapidly differentiate or die. To extend in vitro culture time, researchers have made attempts to use human mesenchymal stem cells (hMSCs) to create feeder layers that mimic the stem cell niche. We have conducted an array of experiments including adipocytes in these feeder layers that inhibit hHSC differentiation and by that prolong stem cell survival in vitro. The amount of CD34+ cells was quantified using flow cytometry. In a first experiment, feeder layers of undifferentiated hMSCs were compared with feeder layers differentiated toward osteoblasts or adipocytes using minimal medium, showing the highest survival rate where adipocytes were included. The same conclusion was drawn in a second experiment in comparing hMSCs with adipogenic feeder cells, using a culture medium supplemented with a cocktail of hHSC growth factors. In a third experiment, it was shown that direct cell–cell contact is necessary for the supportive effect of the feeder layers. In a fourth and fifth experiment the amount of adipocytes in the feeder layers were varied, and in all experiments a higher amount of adipocytes in the feeder layers showed a less rapid decay of CD34+ cells at later time points. We therefore concluded that adipocytes assist in suppressing hHSC differentiation and aid in prolonging their survival in vitro. PMID:23741628

Neuropeptides and epitheliopeptides: structural and functional diversity in an ancestral metazoan Hydra.

PubMed

Takahashi, Toshio

2013-06-01

Peptides are known to play important developmental and physiological roles in signaling. The rich diversity of peptides, with functions as diverse as intercellular communication, neurotransmission and signaling that spatially and temporally controls axis formation and cell differentiation, hints at the wealth of information passed between interacting cells. Little is known about peptides that control developmental processes such as cell differentiation and pattern formation in metazoans. The cnidarian Hydra is one of the most basic metazoans and is a key model system for study of the peptides involved in these processes. We developed a novel peptidomic approach for the isolation and identification of functional peptide signaling molecules from Hydra (the Hydra Peptide Project). Over the course of this project, a wide variety of novel neuropeptides were identified. Most of these peptides act directly on muscle cells and their functions include induction of contraction and relaxation. Some peptides are involved in cell differentiation and morphogenesis. Moreover, epitheliopeptides that are produced by epithelial cells were originally identified in Hydra. Some of these epitheliopeptides exhibit morphogen-like activities, whereas others are involved in regulating neuron differentiation, possibly through neuron-epithelial cell interactions. We also describe below our high-throughput reverse-phase nano-flow LCMALDI- TOF-MS/MS approach, which has proved a powerful tool for the discovery of novel peptide signaling molecules in Hydra.

In vitro differentiation of human umbilical cord blood-derived mesenchymal stem cells into hepatocyte-like cells.

PubMed

Hong, Seung Hyun; Gang, Eun Ji; Jeong, Ju Ah; Ahn, Chiyoung; Hwang, Soo Han; Yang, Il Ho; Park, Hwon Kyum; Han, Hoon; Kim, Hoeon

2005-05-20

In addition to long-term self-renewal capability, human mesenchymal stem cells (MSCs) possess versatile differentiation potential ranging from mesenchyme-related multipotency to neuroectodermal and endodermal competency. Of particular concern is hepatogenic potential that can be used for liver-directed stem cell therapy and transplantation. In this study, we have investigated whether human umbilical cord blood (UCB)-derived MSCs are also able to differentiate into hepatocyte-like cells. MSCs isolated from UCB were cultured under the pro-hepatogenic condition similar to that for bone marrow (BM)-derived MSCs. Expression of a variety of hepatic lineage markers was analyzed by flow cytometry, RT-PCR, Western blot, and immunofluorescence. The functionality of differentiated cells was assessed by their ability to incorporate DiI-acetylated low-density lipoprotein (DiI-Ac-LDL). As the cells were morphologically transformed into hepatocyte-like cells, they expressed Thy-1, c-Kit, and Flt-3 at the cell surface, as well as albumin, alpha-fetoprotein, and cytokeratin-18 and 19 in the interior. Moreover, about a half of the cells were found to acquire the capability to transport DiI-Ac-LDL. Based on these observations, and taking into account immense advantages of UCB over other stem cell sources, we conclude that UCB-derived MSCs retain hepatogenic potential suitable for cell therapy and transplantation against intractable liver diseases.

Numerical study for Darcy-Forchheimer flow of nanofluid due to an exponentially stretching curved surface

NASA Astrophysics Data System (ADS)

Hayat, Tasawar; Haider, Farwa; Muhammad, Taseer; Alsaedi, Ahmed

2018-03-01

Here Darcy-Forchheimer flow of viscous nanofluid with Brownian motion and thermophoresis is addressed. An incompressible viscous liquid saturates the porous space through Darcy-Forchheimer relation. Flow is generated by an exponentially stretching curved surface. System of partial differential equations is converted into ordinary differential system. Nonlinear systems are solved numerically by NDSolve technique. Graphs are plotted for the outcomes of various pertinent variables. Skin friction coefficient and local Nusselt and Sherwood numbers have been physically interpreted. Our results indicate that the local Nusselt and Sherwood numbers are reduced for larger values of local porosity parameter and Forchheimer number.

Unsteady boundary layer flow over a sphere in a porous medium

NASA Astrophysics Data System (ADS)

Mohammad, Nurul Farahain; Waini, Iskandar; Kasim, Abdul Rahman Mohd; Majid, Nurazleen Abdul

2017-08-01

This study focuses on the problem of unsteady boundary layer flow over a sphere in a porous medium. The governing equations which consists of a system of dimensional partial differential equations is applied with dimensionless parameter in order to attain non-dimensional partial differential equations. Later, the similarity transformation is performed in order to attain nonsimilar governing equations. Afterwards, the nonsimilar governing equations are solved numerically by using the Keller-Box method in Octave programme. The effect of porosity parameter is examined on separation time, velocity profile and skin friction of the unsteady flow. The results attained are presented in the form of table and graph.

Thermal Imagery of Groundwater Seeps: Possibilities and Limitations.

PubMed

Mundy, Erin; Gleeson, Tom; Roberts, Mark; Baraer, Michel; McKenzie, Jeffrey M

2017-03-01

Quantifying groundwater flow at seepage faces is crucial because seepage faces influence the hydroecology and water budgets of watersheds, lakes, rivers and oceans, and because measuring groundwater fluxes directly in aquifers is extremely difficult. Seepage faces provide a direct and measurable groundwater flux but there is no existing method to quantitatively image groundwater processes at this boundary. Our objective is to determine the possibilities and limitations of thermal imagery in quantifying groundwater discharge from discrete seeps. We developed a conceptual model of temperature below discrete seeps, observed 20 seeps spectacularly exposed in three dimensions at an unused limestone quarry and conducted field experiments to examine the role of diurnal changes and rock face heterogeneity on thermal imagery. The conceptual model suggests that convective air-water heat exchange driven by temperature differences is the dominant heat transfer mechanism. Thermal imagery is effective at locating and characterizing the flux of groundwater seeps. Areas of active groundwater flow and ice growth can be identified from thermal images in the winter, and seepage rates can be differentiated in the summer. However, the application of thermal imagery is limited by diverse factors including technical issues of image acquisition, diurnal changes in radiation and temperature, and rock face heterogeneity. Groundwater discharge rates could not be directly quantified from thermal imagery using our observations but our conceptual model and experiments suggest that thermal imagery could quantify groundwater discharge when there are large temperature differences, simple cliff faces, non-freezing conditions, and no solar radiation. © 2016, National Ground Water Association.

Actinobacillus pleuropneumoniae genes expression in biofilms cultured under static conditions and in a drip-flow apparatus

PubMed Central

2013-01-01

Background Actinobacillus pleuropneumoniae is the Gram-negative bacterium responsible for porcine pleuropneumonia. This respiratory infection is highly contagious and characterized by high morbidity and mortality. The objectives of our study were to study the transcriptome of A. pleuropneumoniae biofilms at different stages and to develop a protocol to grow an A. pleuropneumoniae biofilm in a drip-flow apparatus. This biofilm reactor is a system with an air-liquid interface modeling lung-like environment. Bacteria attached to a surface (biofilm) and free floating bacteria (plankton) were harvested for RNA isolation. Labelled cDNA was hybridized to a microarray to compare the expression profiles of planktonic cells and biofilm cells. Results It was observed that 47 genes were differentially expressed (22 up, 25 down) in a 4 h-static growing/maturing biofilm and 117 genes were differentially expressed (49 up, 68 down) in a 6h-static dispersing biofilm. The transcriptomes of a 4 h biofilm and a 6 h biofilm were also compared and 456 genes (235 up, 221 down) were identified as differently expressed. Among the genes identified in the 4 h vs 6h biofilm experiment, several regulators of stress response were down-regulated and energy metabolism associated genes were up-regulated. Biofilm bacteria cultured using the drip-flow apparatus differentially expressed 161 genes (68 up, 93 down) compared to the effluent bacteria. Cross-referencing of differentially transcribed genes in the different assays revealed that drip-flow biofilms shared few differentially expressed genes with static biofilms (4 h or 6 h) but shared several differentially expressed genes with natural or experimental infections in pigs. Conclusion The formation of a static biofilm by A. pleuropneumoniae strain S4074 is a rapid process and transcriptional analysis indicated that dispersal observed at 6 h is driven by nutritional stresses. Furthermore, A. pleuropneumoniae can form a biofilm under low-shear force in a drip-flow apparatus and analyses indicated that the formation of a biofilm under low-shear force requires a different sub-set of genes than a biofilm grown under static conditions. The drip-flow apparatus may represent the better in vitro model to investigate biofilm formation of A. pleuropneumoniae. PMID:23725589

Investigation of the required length for fully developed pipe flow with drag-reducing polymer solutions

NASA Astrophysics Data System (ADS)

Farsiani, Yasaman; Elbing, Brian

2015-11-01

Adding trace amounts of long chain polymers into a liquid flow is known to reduce skin friction drag by up to 80%. While polymer drag reduction (PDR) has been successfully implemented in internal flows, diffusion and degradation have limited its external flow applications. A weakness in many previous PDR studies is that there was no characterization of the polymer being injected into the turbulent boundary layer, which can be accomplished by testing a sample in a pressure-drop tube. An implicit assumption in polymer characterization is that the flow is fully developed at the differential pressure measurement. While available data in the literature shows that the entry length to achieve fully developed flow increases with polymeric solutions, it is unclear how long is required to achieve fully developed flow for non-Newtonian turbulent flows. In the present study, the pressure-drop is measured across a 1.05 meter length section of a 1.04 cm inner diameter pipe. Differential pressure is measured with a pressure transducer for different entry lengths, flow and polymer solution properties. This presentation will present preliminary data on the required entrance length as well as characterization of polymer solution an estimate of the mean molecular weight.

Mathematical modeling of the flow field and particle motion in a rotating bioreactor at unit gravity and microgravity

NASA Technical Reports Server (NTRS)

Boyd, Ernest J.

1990-01-01

The biotechnology group at NASA Johnson Space Center is developing systems for culturing mammalian cells that stimulate some aspect of microgravity and provide a low shear environment for microgravity-based studies on suspension and anchorage dependent cells. The design of these vessels for culturing cells is based on the need to suspend cells and aggregates of cells and microcarrier beads continually in the culturing medium. The design must also provide sufficient circulation for adequate mass transfer of nutrients to the cells and minimize the total force on the cells. Forces, resulting from sources such as hydrodynamic fluid shear and collisions of cells and walls of the vessels, may damage delicate cells and degrade the formation of three dimensional structures. This study examines one particular design in both unit gravity and microgravity based on two concentric cylinders rotating in the same direction at different speeds to create a Couette flow between them. A numerical simulation for the flow field and the trajectories of particles in the vessel. The flow field for the circulation of the culturing medium is modeled by the Navier-Stokes equations. The forces on a particle are assumed to be drag from the fluid's circulation, buoyancy from the gravitational force and centrifugal force from the rotation of the vessel. The problem requires first solving the system of partial differential equations for the fluid flow by a finite difference method and then solving the system of ordinary differential equations for the trajectories by Gear's stiff method. Results of the study indicate that the trajectories in unit gravity and microgravity are very similar except for small spatial deviations on the fast time scale in unit gravity. The total force per unit cross sectional area on a particle in microgravity, however, is significantly smaller than the corresponding value in unit gravity, which is also smaller than anticipated. Hence, this study indicates that this design for a bioreactor with optimal rates of rotation can provide a good environment for culturing cells in microgravity with adequate circulation and minimal force on the cells.

Heat transfer at microscopic level in a MHD fractional inertial flow confined between non-isothermal boundaries

NASA Astrophysics Data System (ADS)

Shoaib Anwar, Muhammad; Rasheed, Amer

2017-07-01

Heat transfer through a Forchheimer medium in an unsteady magnetohydrodynamic (MHD) developed differential-type fluid flow is analyzed numerically in this study. The boundary layer flow is modeled with the help of the fractional calculus approach. The fluid is confined between infinite parallel plates and flows by motion of the plates in their own plane. Both the plates have variable surface temperature. Governing partial differential equations with appropriate initial and boundary conditions are solved by employing a finite-difference scheme to discretize the fractional time derivative and finite-element discretization for spatial variables. Coefficients of skin friction and local Nusselt numbers are computed for the fractional model. The flow behavior is presented for various values of the involved parameters. The influence of different dimensionless numbers on skin friction and Nusselt number is discussed by tabular results. Forchheimer medium flows that involve catalytic converters and gas turbines can be modeled in a similar manner.

On the Flow of a Compressible Fluid by the Hodograph Method. II - Fundamental Set of Particular Flow Solutions of the Chaplygin Differential Equation

NASA Technical Reports Server (NTRS)

Garrick, I. E.; Kaplan, Carl

1944-01-01

The differential equation of Chaplygin's jet problem is utilized to give a systematic development of particular solutions of the hodograph flow equations, which extends the treatment of Chaplygin into the supersonic range and completes the set of particular solutions. The particular solutions serve to place on a reasonable basis the use of velocity correction formulas for the comparison of incompressible and compressible flows. It is shown that the geometric-mean type of velocity correction formula introduced in part I has significance as an over-all type of approximation in the subsonic range. A brief review of general conditions limiting the potential flow of an adiabatic compressible fluid is given and application is made to the particular solutions, yielding conditions for the existence of singular loci in the supersonic range. The combining of particular solutions in accordance with prescribed boundary flow conditions is not treated in the present paper.

Insights into asthenospheric anisotropy and deformation in Mainland China

NASA Astrophysics Data System (ADS)

Zhu, Tao

2018-03-01

Seismic anisotropy can provide direct constraints on asthenospheric deformation which also can be induced by the inherent mantle flow within our planet. Mantle flow calculations thus have been an effective tool to probe asthenospheric anisotropy. To explore the source of seismic anisotropy, asthenospheric deformation and the effects of mantle flow on seismic anisotropy in Mainland China, mantle flow models driven by plate motion (plate-driven) and by a combination of plate motion and mantle density heterogeneity (plate-density-driven) are used to predict the fast polarization direction of shear wave splitting. Our results indicate that: (1) plate-driven or plate-density-driven mantle flow significantly affects the predicted fast polarization direction when compared with simple asthenospheric flow commonly used in interpreting the asthenospheric source of seismic anisotropy, and thus new insights are presented; (2) plate-driven flow controls the fast polarization direction while thermal mantle flow affects asthenospheric deformation rate and local deformation direction significantly; (3) asthenospheric flow is an assignable contributor to seismic anisotropy, and the asthenosphere is undergoing low, large or moderate shear deformation controlled by the strain model, the flow plane/flow direction model or both in most regions of central and eastern China; and (4) the asthenosphere is under more rapid extension deformation in eastern China than in western China.

Anomalous Diffusion of Particles Dispersed in Xanthan Solutions Subjected to Shear Flow

NASA Astrophysics Data System (ADS)

Takikawa, Yoshinori; Yasuta, Muneharu; Fujii, Shuji; Orihara, Hiroshi; Tanaka, Yoshimi; Nishinari, Katsuyoshi

2018-05-01

Xanthan gum exhibits viscoelastic and shear-thinning properties. We investigate the Brownian motion of particles dispersed in xanthan gum solutions that are subjected to simple shear flow. The mean square displacements (MSDs) are obtained in both the flow and vorticity directions. In the absence of shear flow, subdiffusion is observed, MSD ∝ tα with α < 1, where t is time. In the presence of shear flow, however, the exponent α becomes larger together with the MSD itself in both the flow and vorticity directions. We show that the diffusion is enhanced by Taylor dispersion in the flow direction, whereas in the vorticity direction it is enhanced by nonthermal self-diffusion.

Discharge and nutrient transport between lakes in a hydrologically complex area of Voyageurs National Park, Minnesota, 2010-2012

USGS Publications Warehouse

Christensen, Victoria G.; Wakeman, Eric; Maki, Ryan P.

2016-01-01

An acoustic Doppler velocity meter (ADVM) was deployed in the narrows between Namakan and Kabetogama Lakes in Voyageurs National Park, Minnesota, from November 3, 2010, through October 3, 2012. The ADVM can account for wind, seiche, and changing flow direction in hydrologically complex areas. The objectives were to (1) estimate discharge and document the direction of water flow, (2) assess whether specific conductance can be used to determine flow direction, and (3) document nutrient and chlorophyll a concentrations at the narrows. The discharge direction through the narrows was seasonal. Water generally flowed out of Kabetogama Lake and into Namakan Lake throughout the ice-covered season. During spring, water flow was generally from Namakan Lake to Kabetogama Lake. During the summer and fall, the water flowed in both directions, affected in part by wind. Water flowed into Namakan Lake 70% of water year 2011 and 56% of water year 2012. Nutrient and chlorophyll a concentrations were highest during the summer months when water-flow direction was unpredictable. The use of an ADVM was effective for assessing flow direction and provided flow direction under ice. The results indicated the eutrophic Kabetogama Lake may have a negative effect on the more pristine Namakan Lake. The results also provide data on the effects of the current water-level management plan and may help determine if adjustments are necessary to help protect the aquatic ecosystem of Voyageurs National Park.

Differential effects of lower body negative pressure and upright tilt on splanchnic blood volume

PubMed Central

Taneja, Indu; Moran, Christopher; Medow, Marvin S.; Glover, June L.; Montgomery, Leslie D.; Stewart, Julian M.

2015-01-01

Upright posture and lower body negative pressure (LBNP) both induce reductions in central blood volume. However, regional circulatory responses to postural changes and LBNP may differ. Therefore, we studied regional blood flow and blood volume changes in 10 healthy subjects undergoing graded lower-body negative pressure (−10 to −50 mmHg) and 8 subjects undergoing incremental head-up tilt (HUT; 20°, 40°, and 70°) on separate days. We continuously measured blood pressure (BP), heart rate, and regional blood volumes and blood flows in the thoracic, splanchnic, pelvic, and leg segments by impedance plethysmography and calculated regional arterial resistances. Neither LBNP nor HUT altered systolic BP, whereas pulse pressure decreased significantly. Blood flow decreased in all segments, whereas peripheral resistances uniformly and significantly increased with both HUT and LBNP. Thoracic volume decreased while pelvic and leg volumes increased with HUT and LBNP. However, splanchnic volume changes were directionally opposite with stepwise decreases in splanchnic volume with LBNP and stepwise increases in splanchnic volume during HUT. Splanchnic emptying in LBNP models regional vascular changes during hemorrhage. Splanchnic filling may limit the ability of the splanchnic bed to respond to thoracic hypovolemia during upright posture. PMID:17085534

Second moment closure analysis of the backstep flow database

NASA Technical Reports Server (NTRS)

Parneix, S.; Laurence, D.; Durbin, P.

1996-01-01

A Second Moment Closure computation (SMC) is compared in detail with the Direct Numerical Simulation (DNS) data of Le and Moin for the backstep flow at Re = 5,000 in an attempt to understand why the intensity of the backflow and, consequently, the friction coefficient in the recirculation bubble are severely underestimated. The data show that this recirculation bubble is far from being laminar except in the very near wall layer. A novel 'differential a priori' procedure was used, in which the full transport equation for one isolated component of the Reynolds stress tensor was solved using DNS data as input. Conclusions are then different from what would have been deduced by comparing a full simulation to a DNS. One cause of discrepancy was traced back to insufficient transfer of energy to the normal stress by pressure strain, but was not cured. A significant finding, confirmed by the DNS data in the core region of a channel flow, is that the coefficient that controls destruction of dissipation, C epsilon(sub 2), should be decreased by a factor of 2 when production is vanishing. This is also the case in the recirculation bubble, and a new formulation has cured 25% of the backflow discrepancy.

High-Fidelity Thermal Radiation Models and Measurements for High-Pressure Reacting Laminar and Turbulent Flows

DTIC Science & Technology

2013-06-26

flow code used ( OpenFOAM ) to include differential diffusion and cell-based stochastic RTE solvers. The models were validated by simulation of laminar...wavenumber selection is improved about by a factor of 10. (5) OpenFOAM Improvements for Laminar Flames A laminar-diffusion combustion solver, taking into...account the effects of differential diffusion, was developed within the open source CFD package OpenFOAM [18]. In addition, OpenFOAM was augmented to take

New technologies for advanced three-dimensional optimum shape design in aeronautics

NASA Astrophysics Data System (ADS)

Dervieux, Alain; Lanteri, Stéphane; Malé, Jean-Michel; Marco, Nathalie; Rostaing-Schmidt, Nicole; Stoufflet, Bruno

1999-05-01

The analysis of complex flows around realistic aircraft geometries is becoming more and more predictive. In order to obtain this result, the complexity of flow analysis codes has been constantly increasing, involving more refined fluid models and sophisticated numerical methods. These codes can only run on top computers, exhausting their memory and CPU capabilities. It is, therefore, difficult to introduce best analysis codes in a shape optimization loop: most previous works in the optimum shape design field used only simplified analysis codes. Moreover, as the most popular optimization methods are the gradient-based ones, the more complex the flow solver, the more difficult it is to compute the sensitivity code. However, emerging technologies are contributing to make such an ambitious project, of including a state-of-the-art flow analysis code into an optimisation loop, feasible. Among those technologies, there are three important issues that this paper wishes to address: shape parametrization, automated differentiation and parallel computing. Shape parametrization allows faster optimization by reducing the number of design variable; in this work, it relies on a hierarchical multilevel approach. The sensitivity code can be obtained using automated differentiation. The automated approach is based on software manipulation tools, which allow the differentiation to be quick and the resulting differentiated code to be rather fast and reliable. In addition, the parallel algorithms implemented in this work allow the resulting optimization software to run on increasingly larger geometries. Copyright

The extended leukocyte differential count using the Cytodiff flow cytometric system reveals that higher CD16+ cytotoxic NK+T lymphocyte levels predict superior survival outcomes in patients with metastatic carcinoma.

PubMed

Park, Borae G; Park, Chan-Jeoung; Yoon, Chan-Hee; Jang, Seongsoo; Chi, Hyun-Sook; Ryu, Min-Hee; Kim, Sang-We

2013-05-01

The recently developed Cytodiff flow cytometric system (Beckman Coulter, Miami, FL) enables leukocyte analysis using a single immunophenotyping panel tube composed of six markers and five colors and that can detect 16 leukocyte subpopulations. We performed a preliminary investigation of whether changes in any of 16 leukocyte differentials were associated with survival and treatment outcomes in patients with metastatic carcinoma or not. We measured 16 leukocyte differential counts using the Cytodiff flow cytometric system in peripheral blood samples from 40 patients with metastatic malignancy (27 stomach cancer and 13 lung cancer) before chemotherapy and at 15 day intervals after chemotherapy for 2 months. A higher percentage of CD16+ cytotoxic NK+T lymphocytes was found to be the only significant prognostic factor among by Cox regression analysis and a higher percentage of CD16+ cytotoxic NK+T lymphocytes (>5.0%) showed significantly longer survival outcomes by Kaplan-Meier analysis (P = 0.003). The Cytodiff system enables 16 leukocyte subpopulations in a one tube assay and also can operate with only small amounts of sample, although it cannot differentiate NK cells from T lymphocytes. Hence, the monitoring of all leukocyte subpopulations using Cytodiff flow cytometry may be a helpful prognostic tool for patients with metastatic carcinoma. Copyright © 2012 International Clinical Cytometry Society.

Fluid pressure waves trigger earthquakes

NASA Astrophysics Data System (ADS)

Mulargia, Francesco; Bizzarri, Andrea

2015-03-01

Fluids-essentially meteoric water-are present everywhere in the Earth's crust, occasionally also with pressures higher than hydrostatic due to the tectonic strain imposed on impermeable undrained layers, to the impoundment of artificial lakes or to the forced injections required by oil and gas exploration and production. Experimental evidence suggests that such fluids flow along preferred paths of high diffusivity, provided by rock joints and faults. Studying the coupled poroelastic problem, we find that such flow is ruled by a nonlinear partial differential equation amenable to a Barenblatt-type solution, implying that it takes place in form of solitary pressure waves propagating at a velocity which decreases with time as v ∝ t [1/(n - 1) - 1] with n ≳ 7. According to Tresca-Von Mises criterion, these waves appear to play a major role in earthquake triggering, being also capable to account for aftershock delay without any further assumption. The measure of stress and fluid pressure inside active faults may therefore provide direct information about fault potential instability.

Droplet Digital Enzyme-Linked Oligonucleotide Hybridization Assay for Absolute RNA Quantification.

PubMed

Guan, Weihua; Chen, Liben; Rane, Tushar D; Wang, Tza-Huei

2015-09-03

We present a continuous-flow droplet-based digital Enzyme-Linked Oligonucleotide Hybridization Assay (droplet digital ELOHA) for sensitive detection and absolute quantification of RNA molecules. Droplet digital ELOHA incorporates direct hybridization and single enzyme reaction via the formation of single probe-RNA-probe (enzyme) complex on magnetic beads. It enables RNA detection without reverse transcription and PCR amplification processes. The magnetic beads are subsequently encapsulated into a large number of picoliter-sized droplets with enzyme substrates in a continuous-flow device. This device is capable of generating droplets at high-throughput. It also integrates in-line enzymatic incubation and detection of fluorescent products. Our droplet digital ELOHA is able to accurately quantify (differentiate 40% difference) as few as ~600 RNA molecules in a 1 mL sample (equivalent to 1 aM or lower) without molecular replication. The absolute quantification ability of droplet digital ELOHA is demonstrated with the analysis of clinical Neisseria gonorrhoeae 16S rRNA to show its potential value in real complex samples.

Droplet Digital Enzyme-Linked Oligonucleotide Hybridization Assay for Absolute RNA Quantification

PubMed Central

Guan, Weihua; Chen, Liben; Rane, Tushar D.; Wang, Tza-Huei

2015-01-01

We present a continuous-flow droplet-based digital Enzyme-Linked Oligonucleotide Hybridization Assay (droplet digital ELOHA) for sensitive detection and absolute quantification of RNA molecules. Droplet digital ELOHA incorporates direct hybridization and single enzyme reaction via the formation of single probe-RNA-probe (enzyme) complex on magnetic beads. It enables RNA detection without reverse transcription and PCR amplification processes. The magnetic beads are subsequently encapsulated into a large number of picoliter-sized droplets with enzyme substrates in a continuous-flow device. This device is capable of generating droplets at high-throughput. It also integrates in-line enzymatic incubation and detection of fluorescent products. Our droplet digital ELOHA is able to accurately quantify (differentiate 40% difference) as few as ~600 RNA molecules in a 1 mL sample (equivalent to 1 aM or lower) without molecular replication. The absolute quantification ability of droplet digital ELOHA is demonstrated with the analysis of clinical Neisseria gonorrhoeae 16S rRNA to show its potential value in real complex samples. PMID:26333806

Numerical study of MHD nanofluid flow and heat transfer past a bidirectional exponentially stretching sheet

NASA Astrophysics Data System (ADS)

Ahmad, Rida; Mustafa, M.; Hayat, T.; Alsaedi, A.

2016-06-01

Recent advancements in nanotechnology have led to the discovery of new generation coolants known as nanofluids. Nanofluids possess novel and unique characteristics which are fruitful in numerous cooling applications. Current work is undertaken to address the heat transfer in MHD three-dimensional flow of magnetic nanofluid (ferrofluid) over a bidirectional exponentially stretching sheet. The base fluid is considered as water which consists of magnetite-Fe3O4 nanoparticles. Exponentially varying surface temperature distribution is accounted. Problem formulation is presented through the Maxwell models for effective electrical conductivity and effective thermal conductivity of nanofluid. Similarity transformations give rise to a coupled non-linear differential system which is solved numerically. Appreciable growth in the convective heat transfer coefficient is observed when nanoparticle volume fraction is augmented. Temperature exponent parameter serves to enhance the heat transfer from the surface. Moreover the skin friction coefficient is directly proportional to both magnetic field strength and nanoparticle volume fraction.

The continuous adjoint approach to the k-ε turbulence model for shape optimization and optimal active control of turbulent flows

NASA Astrophysics Data System (ADS)

Papoutsis-Kiachagias, E. M.; Zymaris, A. S.; Kavvadias, I. S.; Papadimitriou, D. I.; Giannakoglou, K. C.

2015-03-01

The continuous adjoint to the incompressible Reynolds-averaged Navier-Stokes equations coupled with the low Reynolds number Launder-Sharma k-ε turbulence model is presented. Both shape and active flow control optimization problems in fluid mechanics are considered, aiming at minimum viscous losses. In contrast to the frequently used assumption of frozen turbulence, the adjoint to the turbulence model equations together with appropriate boundary conditions are derived, discretized and solved. This is the first time that the adjoint equations to the Launder-Sharma k-ε model have been derived. Compared to the formulation that neglects turbulence variations, the impact of additional terms and equations is evaluated. Sensitivities computed using direct differentiation and/or finite differences are used for comparative purposes. To demonstrate the need for formulating and solving the adjoint to the turbulence model equations, instead of merely relying upon the 'frozen turbulence assumption', the gain in the optimization turnaround time offered by the proposed method is quantified.

Droplet Digital Enzyme-Linked Oligonucleotide Hybridization Assay for Absolute RNA Quantification

NASA Astrophysics Data System (ADS)

Guan, Weihua; Chen, Liben; Rane, Tushar D.; Wang, Tza-Huei

2015-09-01

We present a continuous-flow droplet-based digital Enzyme-Linked Oligonucleotide Hybridization Assay (droplet digital ELOHA) for sensitive detection and absolute quantification of RNA molecules. Droplet digital ELOHA incorporates direct hybridization and single enzyme reaction via the formation of single probe-RNA-probe (enzyme) complex on magnetic beads. It enables RNA detection without reverse transcription and PCR amplification processes. The magnetic beads are subsequently encapsulated into a large number of picoliter-sized droplets with enzyme substrates in a continuous-flow device. This device is capable of generating droplets at high-throughput. It also integrates in-line enzymatic incubation and detection of fluorescent products. Our droplet digital ELOHA is able to accurately quantify (differentiate 40% difference) as few as ~600 RNA molecules in a 1 mL sample (equivalent to 1 aM or lower) without molecular replication. The absolute quantification ability of droplet digital ELOHA is demonstrated with the analysis of clinical Neisseria gonorrhoeae 16S rRNA to show its potential value in real complex samples.

Charging and Transport Dynamics of a Flow-Through Electrode Capacitive Deionization System.

PubMed

Qu, Yatian; Campbell, Patrick G; Hemmatifar, Ali; Knipe, Jennifer M; Loeb, Colin K; Reidy, John J; Hubert, Mckenzie A; Stadermann, Michael; Santiago, Juan G

2018-01-11

We present a study of the interplay among electric charging rate, capacitance, salt removal, and mass transport in "flow-through electrode" capacitive deionization (CDI) systems. We develop two models describing coupled transport and electro-adsorption/desorption which capture salt removal dynamics. The first model is a simplified, unsteady zero-dimensional volume-averaged model which identifies dimensionless parameters and figures of merits associated with cell performance. The second model is a higher fidelity area-averaged model which captures both spatial and temporal responses of charging. We further conducted an experimental study of these dynamics and considered two salt transport regimes: (1) advection-limited regime and (2) dispersion-limited regime. We use these data to validate models. The study shows that, in the advection-limited regime, differential charge efficiency determines the salt adsorption at the early stage of the deionization process. Subsequently, charging transitions to a quasi-steady state where salt removal rate is proportional to applied current scaled by the inlet flow rate. In the dispersion-dominated regime, differential charge efficiency, cell volume, and diffusion rates govern adsorption dynamics and flow rate has little effect. In both regimes, the interplay among mass transport rate, differential charge efficiency, cell capacitance, and (electric) charging current governs salt removal in flow-through electrode CDI.

Design and Assessment of a Dynamic Perfusion Bioreactor for Large Bone Tissue Engineering Scaffolds.

PubMed

Bhaskar, Birru; Owen, Robert; Bahmaee, Hossein; Rao, Parcha Sreenivasa; Reilly, Gwendolen C

2018-06-01

Bioreactors can be used to apply fluid flow in vitro to scaffolds to improve mass transport of media and apply mechanical forces to cells. In this study, we developed and tested an autoclavable, modular perfusion bioreactor suitable for large scaffolds. We investigated the effects of fluid flow induced shear stress (FFSS) on osteogenic differentiation of human embryonic stem cell-derived mesenchymal progenitors (hES-MP cells) cultured on large polyurethane (PU) scaffolds (30 mm diameter × 5 mm thickness) in osteogenesis induction media (OIM). After seeding, scaffolds were either maintained in static conditions or transferred to the bioreactor 3 days post-seeding and a continuous flow rate of 3.47 mL/min was applied. Alkaline phosphatase activity (ALP) was used to evaluate osteogenic differentiation and resazurin salt reduction (RR) to measure metabolic activity after 10 days. Cultures subjected to flow contained significantly more metabolically active cells and higher total DNA content, as well as significantly higher ALP activity compared to scaffolds grown in static culture. These results confirm the responsiveness of hES-MP cells to fluid flow stimuli, and present a cost-effective, user-friendly bioreactor capable of supporting the growth and differentiation of mesenchymal progenitor cells within scaffolds capable of filling large bone defects.

Miniature Flow-Direction/Pitot-Static Pressure Probes

NASA Technical Reports Server (NTRS)

Ashby, George C., Jr.; Coombs, David S.; Eves, John W.; Price, Howard E.; Vasquez, Peter

1989-01-01

Precision flow-direction/pitot-static pressure probes, ranging from 0.035 to 0.090 inch (0.89 to 2.29 mm) in outside diameter, successfully fabricated and calibrated for use in Langley 20-inch Mach 6 Tunnel. Probes simultaneously measure flow direction and static and pitot pressures in flow fields about configurations in hypersonic flow at temperatures up to 500 degree F (260 degree C).

Lagrangian chaos in three- dimensional steady buoyancy-driven flows

NASA Astrophysics Data System (ADS)

Contreras, Sebastian; Speetjens, Michel; Clercx, Herman

2016-11-01

Natural convection plays a key role in fluid dynamics owing to its ubiquitous presence in nature and industry. Buoyancy-driven flows are prototypical systems in the study of thermal instabilities and pattern formation. The differentially heated cavity problem has been widely studied for the investigation of buoyancy-induced oscillatory flow. However, far less attention has been devoted to the three-dimensional Lagrangian transport properties in such flows. This study seeks to address this by investigating Lagrangian transport in the steady flow inside a cubic cavity differentially-heated from the side. The theoretical and numerical analysis expands on previously reported similarities between the current flow and lid-driven flows. The Lagrangian dynamics are controlled by the Péclet number (Pe) and the Prandtl number (Pr). Pe controls the behaviour qualitatively in that growing Pe progressively perturbs the integable state (Pe =0), thus paving the way to chaotic dynamics. Pr plays an entirely quantitative role in that Pr<1 and Pr>1 amplifies and diminishes, respectively, the perturbative effect of non-zero Pe. S.C. acknowledges financial support from Consejo Nacional de Ciencia y Tecnología (CONACYT).

Which Way Is the Flow?

NASA Technical Reports Server (NTRS)

Kao, David

1999-01-01

The line integral convolution (LIC) technique has been known to be an effective tool for depicting flow patterns in a given vector field. There have been many extensions to make it run faster and reveal useful flow information such as velocity magnitude, motion, and direction. There are also extensions to unsteady flows and 3D vector fields. Surprisingly, none of these extensions automatically highlight flow features, which often represent the most important and interesting physical flow phenomena. In this sketch, a method for highlighting flow direction in LIC images is presented. The method gives an intuitive impression of flow direction in the given vector field and automatically reveals saddle points in the flow.

Parametric resonant triad interactions in a free shear layer

NASA Technical Reports Server (NTRS)

Mallier, R.; Maslowe, S. A.

1993-01-01

We investigate the weakly nonlinear evolution of a triad of nearly-neutral modes superimposed on a mixing layer with velocity profile u bar equals Um + tanh y. The perturbation consists of a plane wave and a pair of oblique waves each inclined at approximately 60 degrees to the mean flow direction. Because the evolution occurs on a relatively fast time scale, the critical layer dynamics dominate the process and the amplitude evolution of the oblique waves is governed by an integro-differential equation. The long-time solution of this equation predicts very rapid (exponential of an exponential) amplification and we discuss the pertinence of this result to vortex pairing phenomena in mixing layers.

A granular flow model for dense planetary rings

NASA Technical Reports Server (NTRS)

Borderies, N.; Goldreich, P.; Tremaine, S.

1985-01-01

In the present study of the viscosity of a differentially rotating particle disk, in the limiting case where the particles are densely packed and their collective behavior resembles that of a liquid, the pressure tensor is derived from both the equations of hydrodynamics and a simple kinetic model of collisions due to Haff (1983). Density waves and narrow circular rings are unstable if the liquid approximation applies, and the consequent nonlinear perturbations may generate 'splashing' of the ring material in the vertical direction. These results are pertinent to the origin of the ellipticities of ringlets, the nonaxisymmetric features near the outer edge of the Saturn B ring, and unexplained residuals in kinematic models of the Saturn and Uranus rings.

On the Rayleigh-Taylor Instability in Presence of a Background Shear

NASA Astrophysics Data System (ADS)

Shvydkoy, Roman

2018-01-01

In this note we revisit the classical subject of the Rayleigh-Taylor instability in presence of an incompressible background shear flow. We derive a formula for the essential spectral radius of the evolution group generated by the linearization near the steady state and reveal that the velocity variations neutralize shortwave instabilities. The formula is a direct generalization of the result of Hwang and Guo (Arch Ration Mech Anal 167(3):235-253, (2003). Furthermore, we construct a class of steady states which posses unstable discrete spectrum with neutral essential spectrum. The technique involves the WKB analysis of the evolution equation and contains novel compactness criterion for pseudo-differential operators on unbounded domains.

An axial distribution of seeding, proliferation, and osteogenic differentiation of MC3T3-E1 cells and rat bone marrow-derived mesenchymal stem cells across a 3D Thai silk fibroin/gelatin/hydroxyapatite scaffold in a perfusion bioreactor.

PubMed

Sinlapabodin, Salita; Amornsudthiwat, Phakdee; Damrongsakkul, Siriporn; Kanokpanont, Sorada

2016-01-01

In cell culture, a perfusion bioreactor provides effective transportation of nutrients, oxygen, and waste removal to and from the core of the scaffold. In addition, it provides mechanical stimuli for enhancing osteogenic differentiation. In this study, we used an axial distribution of cell numbers, alkaline phosphatase (ALP) enzyme activity, and calcium content across 4 cross-sections of 10mm thick scaffold, made of Thai silk fibroin (SF)/gelatin (G)/hydroxyapatite (HA), as a tool to evaluate the suitable perfusion flow rate. These evaluations cover all cellular developmental phases starting from seeding, to proliferation, and later osteogenic differentiation. Mouse pre-osteoblastic MC3T3-E1 cell lines were used as a cell model during seeding and proliferation. The bioreactor seeded scaffold provided more uniform cell distribution across the scaffold compared to centrifugal and agitation seeding, while the overall number of adhered cells from bioreactor seeding was slightly lower than agitation seeding. The dynamic culture using 1 ml/min perfusion flow rate (initial shear stress of 0.1 dyn/cm(2)) enabled statistically higher MC3T3-E1 proliferation, ALP activity, and calcium deposition than those observed in the static-culturing condition. However, the perfusion flow rate of 1 ml/min seemed not to be enough for enhancing ALP expression across all sections of the scaffold. Rat bone marrow derived stromal cells (rMSC) were used in the detachment test and osteogenic differentiation. It was found that perfusion flow rate of 5 ml/min caused statistically higher cell detachment than that of 1 and 3 ml/min. The perfusion flow rate of 3 ml/min gave the highest rMSC osteogenic differentiation on a SF/G/HA scaffold than other flow rates, as observed from the significantly highest number of ALP enzyme activity and the calcium content without any significant cell growth. In addition, all of these parameters were evenly distributed across all scaffold sections. Copyright © 2015 Elsevier B.V. All rights reserved.

Global Qualitative Flow-Path Modeling for Local State Determination in Simulation and Analysis

NASA Technical Reports Server (NTRS)

Malin, Jane T. (Inventor); Fleming, Land D. (Inventor)

1998-01-01

For qualitative modeling and analysis, a general qualitative abstraction of power transmission variables (flow and effort) for elements of flow paths includes information on resistance, net flow, permissible directions of flow, and qualitative potential is discussed. Each type of component model has flow-related variables and an associated internal flow map, connected into an overall flow network of the system. For storage devices, the implicit power transfer to the environment is represented by "virtual" circuits that include an environmental junction. A heterogeneous aggregation method simplifies the path structure. A method determines global flow-path changes during dynamic simulation and analysis, and identifies corresponding local flow state changes that are effects of global configuration changes. Flow-path determination is triggered by any change in a flow-related device variable in a simulation or analysis. Components (path elements) that may be affected are identified, and flow-related attributes favoring flow in the two possible directions are collected for each of them. Next, flow-related attributes are determined for each affected path element, based on possibly conflicting indications of flow direction. Spurious qualitative ambiguities are minimized by using relative magnitudes and permissible directions of flow, and by favoring flow sources over effort sources when comparing flow tendencies. The results are output to local flow states of affected components.

Spatial pattern of severe acute respiratory syndrome in-out flow in 2003 in Mainland China.

PubMed

Xu, Chengdong; Wang, Jinfeng; Wang, Li; Cao, Chunxiang

2014-12-31

Severe acute respiratory syndrome (SARS) spread to 32 countries and regions within a few months in 2003. There were 5327 SARS cases from November 2002 to May 2003 in Mainland China, which involved 29 provinces, resulted in 349 deaths, and directly caused economic losses of $18.3 billion. This study used an in-out flow model and flow mapping to visualize and explore the spatial pattern of SARS transmission in different regions. In-out flow is measured by the in-out degree and clustering coefficient of SARS. Flow mapping is an exploratory method of spatial visualization for interaction data. The findings were as follows. (1) SARS in-out flow had a clear hierarchy. It formed two main centers, Guangdong in South China and Beijing in North China, and two secondary centers, Shanxi and Inner Mongolia, both connected to Beijing. (2) "Spring Festival travel" strengthened external flow, but "SARS panic effect" played a more significant role and pushed the external flow to the peak. (3) External flow and its three typical kinds showed obvious spatial heterogeneity, such as self-spreading flow (spatial displacement of SARS cases only within the province or municipality of onset and medical locations); hospitalized flow (spatial displacement of SARS cases that had been seen by a hospital doctor); and migrant flow (spatial displacement of SARS cases among migrant workers). (4) Internal and external flow tended to occur in younger groups, and occupational differentiation was particularly evident. Low-income groups of male migrants aged 19-35 years were the main routes of external flow. During 2002-2003, SARS in-out flow played an important role in countrywide transmission of the disease in Mainland China. The flow had obvious spatial heterogeneity, which was influenced by migrants' behavior characteristics. In addition, the Chinese holiday effect led to irregular spread of SARS, but the panic effect was more apparent in the middle and late stages of the epidemic. These findings constitute valuable input to prevent and control future serious infectious diseases like SARS.

The Combination of Micro Diaphragm Pumps and Flow Sensors for Single Stroke Based Liquid Flow Control

PubMed Central

Jenke, Christoph; Pallejà Rubio, Jaume; Kibler, Sebastian; Häfner, Johannes; Richter, Martin; Kutter, Christoph

2017-01-01

With the combination of micropumps and flow sensors, highly accurate and secure closed-loop controlled micro dosing systems for liquids are possible. Implementing a single stroke based control mode with piezoelectrically driven micro diaphragm pumps can provide a solution for dosing of volumes down to nanoliters or variable average flow rates in the range of nL/min to μL/min. However, sensor technologies feature a yet undetermined accuracy for measuring highly pulsatile micropump flow. Two miniaturizable in-line sensor types providing electrical readout—differential pressure based flow sensors and thermal calorimetric flow sensors—are evaluated for their suitability of combining them with mircopumps. Single stroke based calibration of the sensors was carried out with a new method, comparing displacement volumes and sensor flow volumes. Limitations of accuracy and performance for single stroke based flow control are described. Results showed that besides particle robustness of sensors, controlling resistive and capacitive damping are key aspects for setting up reproducible and reliable liquid dosing systems. Depending on the required average flow or defined volume, dosing systems with an accuracy of better than 5% for the differential pressure based sensor and better than 6.5% for the thermal calorimeter were achieved. PMID:28368344

Exponentially varying viscosity of magnetohydrodynamic mixed convection Eyring-Powell nanofluid flow over an inclined surface

NASA Astrophysics Data System (ADS)

Khan, Imad; Fatima, Sumreen; Malik, M. Y.; Salahuddin, T.

2018-03-01

This paper explores the theoretical study of the steady incompressible two dimensional MHD boundary layer flow of Eyring-Powell nanofluid over an inclined surface. The fluid is considered to be electrically conducting and the viscosity of the fluid is assumed to be varying exponentially. The governing partial differential equations (PDE's) are reduced into ordinary differential equations (ODE's) by applying similarity approach. The resulting ordinary differential equations are solved successfully by using Homotopy analysis method. The impact of pertinent parameters on velocity, concentration and temperature profiles are examined through graphs and tables. Also coefficient of skin friction, Sherwood and Nusselt numbers are illustrated in tabular and graphical form.

Application of the Green's function method for 2- and 3-dimensional steady transonic flows

NASA Technical Reports Server (NTRS)

Tseng, K.

1984-01-01

A Time-Domain Green's function method for the nonlinear time-dependent three-dimensional aerodynamic potential equation is presented. The Green's theorem is being used to transform the partial differential equation into an integro-differential-delay equation. Finite-element and finite-difference methods are employed for the spatial and time discretizations to approximate the integral equation by a system of differential-delay equations. Solution may be obtained by solving for this nonlinear simultaneous system of equations in time. This paper discusses the application of the method to the Transonic Small Disturbance Equation and numerical results for lifting and nonlifting airfoils and wings in steady flows are presented.

Magmatic Flow Record From AMS Data La Gloria Pluton, Central Chile

NASA Astrophysics Data System (ADS)

Gutierrez, F.; Payacan, I. J.; Calderon, S.

2011-12-01

La Gloria Pluton (LGP) is a 10 Ma epizonal intrusion in the Southern Andes, located 40 km east of Santiago, in central Chile. 20 km long and 5 km wide LPG has a thickness of 2.5 km, in the form of a NW elongating inverted canoe. LGP intrudes Miocene volcanics as NS extending cluster of Miocene granitoids. LGP was emplaced at the west of an inverse fault system without exhibiting significant post-intrusion deformation. The fault system includes the Laguna Negra Fault and the El Coironal Fault, at its southern and northern ends respectively. LGP has been interpreted to have had a short cooling time, where subsolidus reequilibration was not pervasive, allowing identification of early and late magmatic conditions and suggesting it to be a single closed chamber. LGP is zoned vertically from granodiorite/quartz monzodiorite to quartz monzonite towards the roof, where hornblende and biotite and minor magnetite-ilmenite are omnipresent. AMS samples were collected at 39 sites to determine of the magnetic anisotropy susceptibility tensor. Magnetic fabric is generally oblate and anisotropy values range from 1.3 to 13.9%, consistent with the prescience magnetite and ilmenite. Magnetic lineation (ML) has a NNW trend, a subhorizontal dip and values between 0.4 and 5.3%. Magnetic foliation (MF) has a NW trend and dip varying from vertical at the walls of the intrusive to subhorizontal inside and under the roof. MF values ranges between 0.8 and 13.3%. Since linear trend of MF is restricted to the LGP interior only and can not be caused by a simple inverse fault system, we interpret the AMS results as a consequence of magmatic flow. ML represents the main flow direction, where several shallow plutons intrude at 10Ma in NW direction. MF is consequence of convection, related to cooling and differentiation, and is comparable to numerical simulations of magma fluid-dynamics during differentiation (R4). Two profiles (EW and NS) indicate that MF linear trend is from 29°/km to 50°/km, where the width of the pluton is 6 and 3.5 km respectively. Vertical MF represents vertical magma flows at the walls, whereas horizontal MF represents horizontal magma flow at the interior and under the roof the chamber. This suggests that a generalization of the MF trend allows determining the subsurface width of a pluton. Acknowledgments This research has been developed by the PBCT-PDA07 project and the FONDECYT (National Fund for Scientific & Technological Development) 11100241 project, both granted by CONICYT (Chilean National Commission for Science and Technology). We thank 4ea for logistic support in field activities in an area difficult to access.

Modeling the purging of dense fluid from a street canyon driven by an interfacial mixing flow and skimming flow

NASA Astrophysics Data System (ADS)

Baratian-Ghorghi, Z.; Kaye, N. B.

2013-07-01

An experimental study is presented to investigate the mechanism of flushing a trapped dense contaminant from a canyon by turbulent boundary layer flow. The results of a series of steady-state experiments are used to parameterize the flushing mechanisms. The steady-state experimental results for a canyon with aspect ratio one indicate that dense fluid is removed from the canyon by two different processes, skimming of dense fluid from the top of the dense layer; and by an interfacial mixing flow that mixes fresh fluid down into the dense lower layer (entrainment) while mixing dense fluid into the flow above the canyon (detrainment). A model is developed for the time varying buoyancy profile within the canyon as a function of the Richardson number which parameterizes both the interfacial mixing and skimming processes observed. The continuous release steady-state experiments allowed for the direct measurement of the skimming and interfacial mixing flow rates for any layer depth and Richardson number. Both the skimming rate and the interfacial mixing rate were found to be power-law functions of the Richardson number of the layer. The model results were compared to the results of previously published finite release experiments [Z. Baratian-Ghorghi and N. B. Kaye, Atmos. Environ. 60, 392-402 (2012)], 10.1016/j.atmosenv.2012.06.077. A high degree of consistency was found between the finite release data and the continuous release data. This agreement acts as an excellent check on the measurement techniques used, as the finite release data was based on curve fitting through buoyancy versus time data, while the continuous release data was calculated directly by measuring the rate of addition of volume and buoyancy once a steady-state was established. Finally, a system of ordinary differential equations is presented to model the removal of dense fluid from the canyon based on empirical correlations of the skimming and interfacial mixing taken form the steady-state experiments. The ODE model predicts well the time taken for a finite volume of dense fluid to be flushed from a canyon.

Experimental Techniques Verified for Determining Yield and Flow Surfaces

NASA Technical Reports Server (NTRS)

Lerch, Brad A.; Ellis, Rod; Lissenden, Cliff J.

1998-01-01

Structural components in aircraft engines are subjected to multiaxial loads when in service. For such components, life prediction methodologies are dependent on the accuracy of the constitutive models that determine the elastic and inelastic portions of a loading cycle. A threshold surface (such as a yield surface) is customarily used to differentiate between reversible and irreversible flow. For elastoplastic materials, a yield surface can be used to delimit the elastic region in a given stress space. The concept of a yield surface is central to the mathematical formulation of a classical plasticity theory, but at elevated temperatures, material response can be highly time dependent. Thus, viscoplastic theories have been developed to account for this time dependency. Since the key to many of these theories is experimental validation, the objective of this work (refs. 1 and 2) at the NASA Lewis Research Center was to verify that current laboratory techniques and equipment are sufficient to determine flow surfaces at elevated temperatures. By probing many times in the axial-torsional stress space, we could define the yield and flow surfaces. A small offset definition of yield (10 me) was used to delineate the boundary between reversible and irreversible behavior so that the material state remained essentially unchanged and multiple probes could be done on the same specimen. The strain was measured with an off-the-shelf multiaxial extensometer that could measure the axial and torsional strains over a wide range of temperatures. The accuracy and resolution of this extensometer was verified by comparing its data with strain gauge data at room temperature. The extensometer was found to have sufficient resolution for these experiments. In addition, the amount of crosstalk (i.e., the accumulation of apparent strain in one direction when strain in the other direction is applied) was found to be negligible. Tubular specimens were induction heated to determine the flow surfaces at elevated temperatures. The heating system induced a large amount of noise in the data. By reducing thermal fluctuations and using appropriate data averaging schemes, we could render the noise inconsequential. Thus, accurate and reproducible flow surfaces (see the figure) could be obtained.

A tutorial on dynamical systems concepts applied to Lagrangian transport in oceanic flows defined as finite time data sets: Theoretical and computational issues

NASA Astrophysics Data System (ADS)

Mancho, Ana M.; Small, Des; Wiggins, Stephen

2006-12-01

In the past 15 years the framework and ideas from dynamical systems theory have been applied to a variety of transport and mixing problems in oceanic flows. The motivation for this approach comes directly from advances in observational capabilities in oceanography (e.g., drifter deployments, remote sensing capabilities, satellite imagery, etc.) which reveal space-time structures that are highly suggestive of the structures one visualizes in the global, geometrical study of dynamical systems theory. In this tutorial, we motivate this approach by showing the relationship between fluid transport in two-dimensional time-periodic incompressible flows and the geometrical structures that exist for two-dimensional area-preserving maps, such as hyperbolic periodic orbits, their stable and unstable manifolds and KAM (Kolmogorov-Arnold-Moser) tori. This serves to set the stage for the attempt to “transfer” this approach to more realistic flows modelling the ocean. However, in order to accomplish this several difficulties must be overcome. The first difficulty that confronts us that any attempt to carry out a dynamical systems approach to transport requires us to obtain the appropriate “dynamical system”, which is the velocity field describing the fluid flow. In general, adequate model velocity fields are obtained by numerical solution of appropriate partial differential equations describing the dynamical evolution of the velocity field. Numerical solution of the partial differential equations can only be done for a finite time interval, and since the ocean is generally not time-periodic, this leads to a new type of dynamical system: a finite-time, aperiodically time-dependent velocity field defined as a data set on a space-time grid. The global, geometrical analysis of transport in such dynamical systems requires both new concepts and new analytical and computational tools, as well as the necessity to discard some of the standard ideas and results from dynamical systems theory. The purpose of this tutorial is to describe these new concepts and analytical tools first using simple dynamical systems where quantities can be computed exactly. We then discuss their computational implications and implementation in the context of a model geophysical flow: a turbulent wind-driven double-gyre in the quasigeostrophic approximation.

The combustion program at CTR

NASA Technical Reports Server (NTRS)

Poinsot, Thierry J.

1993-01-01

Understanding and modeling of turbulent combustion are key problems in the computation of numerous practical systems. Because of the lack of analytical theories in this field and of the difficulty of performing precise experiments, direct numerical simulation (DNS) appears to be one of the most attractive tools to use in addressing this problem. The general objective of DNS of reacting flows is to improve our knowledge of turbulent combustion but also to use this information for turbulent combustion models. For the foreseeable future, numerical simulation of the full three-dimensional governing partial differential equations with variable density and transport properties as well as complex chemistry will remain intractable; thus, various levels of simplification will remain necessary. On one hand, the requirement to simplify is not necessarily a handicap: numerical simulations allow the researcher a degree of control in isolating specific physical phenomena that is inaccessible in experiments. CTR has pursued an intensive research program in the field of DNS for turbulent reacting flows since 1987. DNS of reacting flows is quite different from DNS of non-reacting flows: without reaction, the equations to solve are clearly the five conservation equations of the Navier Stokes system for compressible situations (four for incompressible cases), and the limitation of the approach is the Reynolds number (or in other words the number of points in the computation). For reacting flows, the choice of the equations, the species (each species will require one additional conservation equation), the chemical scheme, and the configuration itself is more complex.

Detecting biological responses to flow management: Missed opportunities; future directions

USGS Publications Warehouse

Souchon, Y.; Sabaton, C.; Deibel, R.; Reiser, D.; Kershner, J.; Gard, M.; Katopodis, C.; Leonard, P.; Poff, N.L.; Miller, W.J.; Lamb, B.L.

2008-01-01

The conclusions of numerous stream restoration assessments all around the world are extremely clear and convergent: there has been insufficient appropriate monitoring to improve general knowledge and expertise. In the specialized field of instream flow alterations, we consider that there are several opportunities comparable to full-size experiments. Hundreds of water management decisions related to instream flow releases have been made by government agencies, native peoples, and non-governmental organizations around the world. These decisions are based on different methods and assumptions and many flow regimes have been adopted by formal or informal rules and regulations. Although, there have been significant advances in analytical capabilities, there has been very little validation monitoring of actual outcomes or research related to the response of aquatic dependent species to new flow regimes. In order to be able to detect these kinds of responses and to better guide decision, a general design template is proposed. The main steps of this template are described and discussed, in terms of objectives, hypotheses, variables, time scale, data management, and information, in the spirit of adaptive management. The adoption of such a framework is not always easy, due to differing interests of actors for the results, regarding the duration of monitoring, nature of funding and differential timetables between facilities managers and technicians. Nevertheless, implementation of such a framework could help researchers and practitioners to coordinate and federate their efforts to improve the general knowledge of the links between the habitat dynamics and biological aquatic responses. Copyright ?? 2008 John Wiley & Sons, Ltd.

Middle Miocene reworked turbidites in the Baiyun Sag of the Pearl River Mouth Basin, northern South China Sea margin: Processes, genesis, and implications

NASA Astrophysics Data System (ADS)

Gong, Chenglin; Wang, Yingmin; Zheng, Rongcai; Hernández-Molina, F. Javier; Li, Yun; Stow, Dorrik; Xu, Qiang; Brackenridge, Rachel E.

2016-10-01

Our understanding of reworked turbidites is still in its infancy, and their flow processes and genesis still remain understudied. Core data from the middle Miocene Zhujiang Formation in the Pearl River Mouth Basin allow us to differentiate reworked turbidites, yielding two main contributions. Firstly, reworked turbidites are distinguished from turbidites by the association of traction structures and tidal signatures, which occur in discrete units rather than forming a classic ;Bouma Sequence; for turbidites. Sedimentological characteristics of reworked turbidites proposed here will help to obtain a robust set of diagnostic criteria for the recognition of deep-water non-turbidite deepwater units as reservoirs. Secondly, our results suggest that, in the down-slope direction, classic detritus carried in turbidity flows would synchronously be bidirectionally reworked by internal tides and waves, resulting in tidal signatures seen in the interpreted reworked turbidites. In the along-slope direction, upper parts of dilute turbidity currents would mix vertically with seawater, and muddy fines would be winnowed away by contour currents, whereas lower parts of dilute turbidity currents would probably drop their coarse particles, resulting in traction structures recognized in the documented reworked turbidites. Our work highlights the influence of bottom currents on the development and modification of turbidites and suggests that reworked turbidites were created by the combined action of down-slope transport and reworking and along-slope winnowing and sorting, helping to better understand flow processes and genesis of non-turbidite reservoirs with a great economic interest.

Ionization based multi-directional flow sensor

DOEpatents

Chorpening, Benjamin T [Morgantown, WV; Casleton, Kent H [Morgantown, WV

2009-04-28

A method, system, and apparatus for conducting real-time monitoring of flow (airflow for example) in a system (a hybrid power generation system for example) is disclosed. The method, system and apparatus measure at least flow direction and velocity with minimal pressure drop and fast response. The apparatus comprises an ion source and a multi-directional collection device proximate the ion source. The ion source is configured to generate charged species (electrons and ions for example). The multi-directional collection source is configured to determine the direction and velocity of the flow in real-time.

Local adaptation and pronounced genetic differentiation in an extremophile fish, Poecilia mexicana, inhabiting a Mexican cave with toxic hydrogen sulphide.

PubMed

Plath, M; Hauswaldt, J S; Moll, K; Tobler, M; García De León, F J; Schlupp, I; Tiedemann, R

2007-03-01

We investigated genetic differentiation and migration patterns in a small livebearing fish, Poecilia mexicana, inhabiting a sulfidic Mexican limestone cave (Cueva del Azufre). We examined fish from three different cave chambers, the sulfidic surface creek draining the cave (El Azufre) and a nearby surface creek without the toxic hydrogen sulphide (Arroyo Cristal). Using microsatellite analysis of 10 unlinked loci, we found pronounced genetic differentiation among the three major habitats: Arroyo Cristal, El Azufre and the cave. Genetic differentiation was also found within the cave between different pools. An estimation of first-generation migrants suggests that (i) migration is unidirectional, out of the cave, and (ii) migration among different cave chambers occurs to some extent. We investigated if the pattern of genetic differentiation is also reflected in a morphological trait, eye size. Relatively large eyes were found in surface habitats, small eyes in the anterior cave chambers, and the smallest eyes were detected in the innermost cave chamber (XIII). This pattern shows some congruence with a previously proposed morphocline in eye size. However, our data do not support the proposed mechanism for this morphocline, namely that it would be maintained by migration from both directions into the middle cave chambers. This would have led to an increased variance in eye size in the middle cave chambers, which we did not find. Restricted gene flow between the cave and the surface can be explained by local adaptations to extreme environmental conditions, namely H2S and absence of light. Within the cave system, habitat properties are patchy, and genetic differentiation between cave chambers despite migration could indicate local adaptation at an even smaller scale.

In vitro myotoxic effects of bupivacaine on rhabdomyosarcoma cells, immortalized and primary muscle cells.

PubMed

Metterlein, Thomas; Hoffmann, Petra; Späth, Ruth; Gruber, Michael; Graf, Bernhard M; Zink, Wolfgang

2015-01-01

Rhabdomyosarcoma is a rare malignant skeletal muscle tumor. It mainly occurs in children and young adults and has an unsatisfactory prognosis. Prior studies showed a direct myotoxic effect of bupivacaine on differentiated muscle cells in vitro and in vivo. Exact mechanisms of this myotoxicity are still not fully understood, but a myotoxic effect on malignant muscle tumor cells has not been examined so far. Thus, the aim of this study was to examine if bupivacaine has cytotoxic effects on rhabdomyosarcoma cells, immortalized muscle cells and differentiated muscle cells. Cell lines of rhabdomyosarcoma cells, immortalized muscle cells and differentiated muscle cells were established. After microscopic identification, cells were exposed to various concentrations of bupivacaine (500, 1,000, 1,750, 2,500 and 5,000 ppm) for 1 and 2 h, respectively. 24 and 28 h after incubation the cultures were stained with propidium iodid and analyzed by flow cytometry. The fraction of dead cells was calculated for each experiment and the concentration with 50% cell survival (IC50) was computed. Cell groups as well as incubation and recovery time were compared (ANOVA/Bonferroni p < 0.01). The total number of cultured cells was similar for the different local anesthetics and examined concentrations. Increasing concentrations of bupivacaine led to a decrease in survival of muscle cells. IC50 was highest for immortalized cells, followed by rhabdomyosarcoma cells and differentiated cells. Exposure time, but not recovery time, had an influence on survival. Bupivacaine has clear but different cytotoxic effects on various muscle cell types in vitro. Differentiated primary cells seem to be more vulnerable than tumor cells possibly because of more differentiated intracellular structures.

Forced expression of Hnf4a induces hepatic gene activation through directed differentiation.

PubMed

Yahoo, Neda; Pournasr, Behshad; Rostamzadeh, Jalal; Fathi, Fardin

2016-08-05

Embryonic stem (ES) cells are capable of unlimited self-renewal and have a diverse differentiation potential. These unique features make ES cells as an attractive source for developmental biology studies. Having the mature hepatocyte in the lab with functional activities is valuable in drug discovery studies. Overexpression of hepatocyte lineage-specific transcription factors (TFs) becomes a promising approach in pluripotent cell differentiation toward liver cells. Many studies generate transgenic ES cell lines to examine the effects of specific TFs overexpression in cell differentiation. In the present report, we have addressed whether a suspension or adherent model of differentiation is an appropriate way to study the role of Hnf4a overexpression. We generated ES cells that carried a doxycycline (Dox)-inducible Hnf4a using lentiviral vectors. The transduced cells were subjected to induced Hnf4a overexpression through both spontaneous and directed differentiation methods. Gene expression analysis showed substantially increased expression of hepatic gene markers, particularly Ttr and endogenous Hnf4a, in transduced cells differentiated by the directed approach. These results demonstrated that forced expression of TFs during directed differentiation would be an appropriate way to study relevant gene activation and the effects of overexpression in the context of hepatic differentiation. Copyright © 2016 Elsevier Inc. All rights reserved.

Differential invariants for spherical flows of a viscid fluid

NASA Astrophysics Data System (ADS)

Duyunova, Anna; Lychagin, Valentin; Tychkov, Sergey

2018-01-01

Symmetries and the corresponding algebras of differential invariants of viscid fluids on a sphere are given. Their dependence on thermodynamical states of media is studied, and a classification of thermodynamical states is given.

Buoyancy effects on the radiative magneto Micropolar nanofluid flow with double stratification, activation energy and binary chemical reaction.

PubMed

Ramzan, M; Ullah, Naeem; Chung, Jae Dong; Lu, Dianchen; Farooq, Umer

2017-10-10

A mathematical model has been developed to examine the magneto hydrodynamic micropolar nanofluid flow with buoyancy effects. Flow analysis is carried out in the presence of nonlinear thermal radiation and dual stratification. The impact of binary chemical reaction with Arrhenius activation energy is also considered. Apposite transformations are engaged to transform nonlinear partial differential equations to differential equations with high nonlinearity. Resulting nonlinear system of differential equations is solved by differential solver method in Maple software which uses Runge-Kutta fourth and fifth order technique (RK45). To authenticate the obtained results, a comparison with the preceding article is also made. The evaluations are executed graphically for numerous prominent parameters versus velocity, micro rotation component, temperature, and concentration distributions. Tabulated numerical calculations of Nusselt and Sherwood numbers with respective well-argued discussions are also presented. Our findings illustrate that the angular velocity component declines for opposing buoyancy forces and enhances for aiding buoyancy forces by changing the micropolar parameter. It is also found that concentration profile increases for higher values of chemical reaction parameter, whereas it diminishes for growing values of solutal stratification parameter.

The application of satellite differential SAR interferometry-derived ground displacements in hydrogeology

USGS Publications Warehouse

Galloway, D.L.; Hoffmann, J.

2007-01-01

The application of satellite differential synthetic aperture radar (SAR) interferometry, principally coherent (InSAR) and to a lesser extent, persistent-scatterer (PSI) techniques to hydrogeologic studies has improved capabilities to map, monitor, analyze, and simulate groundwater flow, aquifer-system compaction and land subsidence. A number of investigations over the previous decade show how the spatially detailed images of ground displacements measured with InSAR have advanced hydrogeologic understanding, especially when a time series of images is used in conjunction with histories of changes in water levels and management practices. Important advances include: (1) identifying structural or lithostratigraphic boundaries (e.g. faults or transitional facies) of groundwater flow and deformation; (2) defining the material and hydraulic heterogeneity of deforming aquifer-systems; (3) estimating system properties (e.g. storage coefficients and hydraulic conductivities); and (4) constraining numerical models of groundwater flow, aquifer-system compaction, and land subsidence. As a component of an integrated approach to hydrogeologic monitoring and characterization of unconsolidated alluvial groundwater basins differential SAR interferometry contributes unique information that can facilitate improved management of groundwater resources. Future satellite SAR missions specifically designed for differential interferometry will enhance these contributions. ?? Springer-Verlag 2006.

On new scaling group of transformation for Prandtl-Eyring fluid model with both heat and mass transfer

NASA Astrophysics Data System (ADS)

Rehman, Khalil Ur; Malik, Aneeqa Ashfaq; Malik, M. Y.; Tahir, M.; Zehra, Iffat

2018-03-01

A short communication is structured to offer a set of scaling group of transformation for Prandtl-Eyring fluid flow yields by stretching flat porous surface. The fluid flow regime is carried with both heat and mass transfer characteristics. To seek solution of flow problem a set of scaling group of transformation is proposed by adopting Lie approach. These transformations are used to step down the partial differential equations into ordinary differential equations. The reduced system is solved by numerical method termed as shooting method. A self-coded algorithm is executed in this regard. The obtain results are elaborated by means of figures and tables.

Rotating flow of a nanofluid due to an exponentially stretching surface with suction

NASA Astrophysics Data System (ADS)

Salleh, Siti Nur Alwani; Bachok, Norfifah; Arifin, Norihan Md

2017-08-01

An analysis of the rotating nanofluid flow past an exponentially stretched surface with the presence of suction is studied in this work. Three different types of nanoparticles, namely, copper, titania and alumina are considered. The system of ordinary differential equations is computed numerically using a shooting method in Maple software after being transformed from the partial differential equations. This transformation has considered the similarity transformations in exponential form. The physical effect of the rotation, suction and nanoparticle volume fraction parameters on the rotating flow and heat transfer phenomena is investigated and has been described in detail through graphs. The dual solutions are found to appear when the governing parameters reach a certain range.

Direct Validation of Differential Prediction.

ERIC Educational Resources Information Center

Lunneborg, Clifford E.

Using academic achievement data for 655 University students, direct validation of differential predictions based on a battery of aptitude/achievement measures selected for their differential prediction efficiency was attempted. In the cross-validation of the prediction of actual differences among five academic area GPA's, this set of differential…

Conceptual model and numerical simulation of the groundwater-flow system of Bainbridge Island, Washington

USGS Publications Warehouse

Frans, Lonna M.; Bachmann, Matthew P.; Sumioka, Steve S.; Olsen, Theresa D.

2011-01-01

Groundwater is the sole source of drinking water for the population of Bainbridge Island. Increased use of groundwater supplies on Bainbridge Island as the population has grown over time has created concern about the quantity of water available and whether saltwater intrusion will occur as groundwater usage increases. A groundwater-flow model was developed to aid in the understanding of the groundwater system and the effects of groundwater development alternatives on the water resources of Bainbridge Island. Bainbridge Island is underlain by unconsolidated deposits of glacial and nonglacial origin. The surficial geologic units and the deposits at depth were differentiated into aquifers and confining units on the basis of areal extent and general water-bearing characteristics. Eleven principal hydrogeologic units are recognized in the study area and form the basis of the groundwater-flow model. A transient variable-density groundwater-flow model of Bainbridge Island and the surrounding area was developed to simulate current (2008) groundwater conditions. The model was calibrated to water levels measured during 2007 and 2008 using parameter estimation (PEST) to minimize the weighted differences or residuals between simulated and measured hydraulic head. The calibrated model was used to make some general observations of the groundwater system in 2008. Total flow through the groundwater system was about 31,000 acre-ft/ yr. The recharge to the groundwater system was from precipitation and septic-system returns. Groundwater flow to Bainbridge Island accounted for about 1,000 acre-ft/ yr or slightly more than 5 percent of the recharge amounts. Groundwater discharge was predominately to streams, lakes, springs, and seepage faces (16,000 acre-ft/yr) and directly to marine waters (10,000 acre-ft/yr). Total groundwater withdrawals in 2008 were slightly more than 6 percent (2,000 acre-ft/yr) of the total flow. The calibrated model was used to simulate predevelopment conditions, during which no groundwater pumping or secondary recharge occurred and currently developed land was covered by conifer forests. Simulated water levels in the uppermost aquifer generally were slightly higher at the end of 2008 than under predevelopment conditions, likely due to increased recharge from septic returns and reduced evapotranspiration losses due to conversion of land cover from forests to current conditions. Simulated changes in water levels for the extensively used sea-level aquifer were variable, although areas with declines between zero and 10 feet were common and generally can be traced to withdrawals from public-supply drinking wells. Simulated water-level declines in the deep (Fletcher Bay) aquifer between predevelopment and 2008 conditions ranged from about 10 feet in the northeast to about 25 feet on the western edge of the Island. These declines are related to groundwater withdrawals for public-supply purposes. The calibrated model also was used to simulate the possible effects of increased groundwater pumping and changes to recharge due to changes in land use and climactic conditions between 2008 and 2035 under minimal, expected, and maximum impact conditions. Drawdowns generally were small for most of the Island (less than 10 ft) for the minimal and expected impact scenarios, and were larger for the maximum impact scenario. No saltwater intrusion was evident in any scenario by the year 2035. The direction of flow in the deep Fletcher Bay aquifer was simulated to reverse direction from its predevelopment west to east direction to an east to west direction under the maximum impact scenario.

Analysis of antigen-specific B-cell memory directly ex vivo.

PubMed

McHeyzer-Williams, Louise J; McHeyzer-Williams, Michael G

2004-01-01

Helper T-cell-regulated B-cell memory develops in response to initial antigen priming as a cellular product of the germinal center (GC) reaction. On antigen recall, memory response precursors expand rapidly with exaggerated differentiation into plasma cells to produce the high-titer, high-affinity antibody(Ab) that typifies the memory B-cell response in vivo. We have devised a high-resolution flow cytometric strategy to quantify the emergence and maintenance of antigen-specific memory B cells directly ex vivo. Extended cell surface phenotype establishes a level of cellular diversity not previously appreciated for the memory B-cell compartment. Using an "exclusion transfer" strategy, we ascertain the capacity of two distinct memory B-cell populations to transfer antigen-specific memory into naive adoptive hosts. Finally, we sequence expressed messenger ribonucleic acid (mRNA) from single cells within the population to estimate the level of somatic hypermutation as the best molecular indicator of B-cell memory. In this chapter, we describe the methods used in each of these four sections that serve to provide high-resolution quantification of antigen-specific B-cell memory responses directly ex vivo.

Comparison of forearm blood flow responses to incremental handgrip and cycle ergometer exercise: relative contribution of nitric oxide

PubMed Central

Green, Daniel J; Bilsborough, William; Naylor, Louise H; Reed, Chris; Wright, Jeremy; O'Driscoll, Gerry; Walsh, Jennifer H

2005-01-01

The contribution of endothelium-derived nitric oxide (NO) to exercise hyperaemia remains controversial. Disparate findings may, in part, be explained by different shear stress stimuli as a result of different types of exercise. We have directly compared forearm blood flow (FBF) responses to incremental handgrip and cycle ergometer exercise in 14 subjects (age ± s.e.m.) using a novel software system which calculates conduit artery blood flow continuously across the cardiac cycle by synchronising automated edge-detection and wall tracking of high resolution B-mode arterial ultrasound images and Doppler waveform envelope analysis. Monomethyl arginine (l-NMMA) was infused during repeat bouts of each incremental exercise test to assess the contribution of NO to hyperaemic responses. During handgrip, mean FBF increased with workload (P < 0.01) whereas FBF decreased at lower cycle workloads (P < 0.05), before increasing at 120 W (P < 0.001). Differences in these patterns of mean FBF response to different exercise modalities were due to the influence of retrograde diastolic flow during cycling, which had a relatively larger impact on mean flows at lower workloads. Retrograde diastolic flow was negligible during handgrip. Although mean FBF was lower in response to cycling than handgrip exercise, the impact of l–NMMA was significant during the cycle modality only (P < 0.05), possibly reflecting the importance of an oscillatory antegrade/retrograde flow pattern on shear stress-mediated release of NO from the endothelium. In conclusion, different types of exercise present different haemodynamic stimuli to the endothelium, which may result in differential effects of shear stress on the vasculature. PMID:15513940

Isolating causal pathways between flow and fish in the regulated river hierarchy

DOE Office of Scientific and Technical Information (OSTI.GOV)

McManamay, Ryan A.; Peoples, Brandon K.; Orth, Donald J.

Unregulated river systems are organized in a hierarchy in which large-scale factors (i.e., landscape and segment scales) influence local habitats (i.e., reach, meso-, and microhabitat scales), and both differentially exert selective pressures on biota. Dams, however, create discontinua in these processes and change the hierarchical structure. We examined the relative roles of hydrology and other instream factors, within a hierarchical landscape context, in organizing fish communities in regulated and unregulated tributaries to the Upper Tennessee River, USA. We also used multivariate regression trees to identify factors that partition fish assemblages based on trait similarities, irrespective of spatial scale. Then, wemore » used classical path analysis and structural equation modeling to evaluate the most plausible hierarchical causal structure of specific trait-based community components, given the data. Both statistical approaches suggested that river regulation affects stream fishes through a variety of reach-scale variables, not always through hydrology itself. Though we observed different changes in flow, temperature, and biotic responses according to regulation types, the most predominant path in which dam regulation affected biota was via temperature alterations. Diversion dams had the strongest effects on fish assemblages. Diversion dams reduced flow magnitudes, leading to declines in fish richness but increased temperatures, leading to lower abundances in equilibrium species and nest guarders. Peaking and run-of-river dams increased flow variability, leading to lower abundances in nest-guarding fishes. Flow displayed direct relationships with biotic responses; however, results indicated that changes in temperature and substrate had equal, if not stronger, effects on fish assemblage composition. The strength and nature of relationships depended on whether flow metrics were standardized for river size. Here, we suggest that restoration efforts in regulated rivers focus on improving flow conditions in conjunction with temperature and substrate restoration.« less