The importance of the diurnal cycle of Aerosol Optical Depth in West Africa

NASA Astrophysics Data System (ADS)

Kocha, Cécile; Tulet, Pierre; Lafore, Jean-Philippe; Flamant, Cyrille; Banks, Jamie; Marnas, Fabien; Brindley, Helen; Marsham, Jonh

2013-04-01

High resolution atmospheric simulations with the AROME model coupled with a dust module over West Africa for the whole of June 2006 and 2011 were used to calculate Aerosol Optical Depth (AOD). But the simulations showed a significant diurnal cycle of 0.2 in the dust AOD that could not be inferred from the MODIS Deep Blue satellite retrievals due to their time of overpass. The AROME AOD diurnal cycle have been compared to the new SEVIRI AOD retrievals in June 2011 and shows simlar AOD diurnal cycle. In fact, dust sources are mainly driven by the breakdown of the early morning low-level jet and by moist convection in the afternoon, leading to opposite diurnal cycles. The contribution in dust production is calculated for each processes. Moreover, simulations show that cloud cover significantly prevents the observation of AOD in convective areas. The under-sampling of the diurnal cycle by satellites like MODIS plus the impact of cloud masks on the space-borne AOD retrievals induce an underestimation of 0.28 (~40%) over the convective regions and an overestimation of 0.1 (17%) over morning source areas like Bodélé. Finally, the vertical dust distribution is explored via CALIPSO monthly mean from 2006 to 2011. The vertical dust distribution is a clue element to determine the dust raciative impact. Over the June month, the dust radiative impact affect the atmospheric energetic budget by an absorption of the short wave of 58W/m²/AOD into the atmosphere and a reduction of 50W/m²/AOD at the surface.

Covariability in the Monthly Mean Convective and Radiative Diurnal Cycles in the Amazon

NASA Technical Reports Server (NTRS)

Dodson, Jason B.; Taylor, Patrick C.

2015-01-01

The diurnal cycle of convective clouds greatly influences the radiative energy balance in convectively active regions of Earth, through both direct presence, and the production of anvil and stratiform clouds. Previous studies show that the frequency and properties of convective clouds can vary on monthly timescales as a result of variability in the monthly mean atmospheric state. Furthermore, the radiative budget in convectively active regions also varies by up to 7 Wm-2 in convectively active regions. These facts suggest that convective clouds connect atmospheric state variability and radiation variability beyond clear sky effects alone. Previous research has identified monthly covariability between the diurnal cycle of CERES-observed top-of-atmosphere radiative fluxes and multiple atmospheric state variables from reanalysis over the Amazon region. ASVs that enhance (reduce) deep convection, such as CAPE (LTS), tend to shift the daily OLR and cloud albedo maxima earlier (later) in the day by 2-3 hr. We first test the analysis method using multiple reanalysis products for both the dry and wet seasons to further investigate the robustness of the preliminary results. We then use CloudSat data as an independent cloud observing system to further evaluate the relationships of cloud properties to variability in radiation and atmospheric states. While CERES can decompose OLR variability into clear sky and cloud effects, it cannot determine what variability in cloud properties lead to variability in the radiative cloud effects. Cloud frequency, cloud top height, and cloud microphysics all contribute to the cloud radiative effect, all of which are observable by CloudSat. In addition, CloudSat can also observe the presence and variability of deep convective cores responsible for the production of anvil clouds. We use these capabilities to determine the covariability of convective cloud properties and the radiative diurnal cycle.

Diurnal Cycle of Convection and Air-Sea-Land Interaction Associated with MJO over the Maritime Continent

NASA Astrophysics Data System (ADS)

Savarin, A.; Chen, S. S.

2016-12-01

The Madden-Julian Oscillation (MJO) is a dominant mode of intraseasonal variability in the tropics. Large-scale convection fueling the MJO is initiated over the tropical Indian Ocean and propagates eastward across the Maritime Continent (MC) and into the western Pacific as a pattern of alternating phases of active and suppressed convection. As an eastward-propagating MJO convective event encounters the MC, its nature is altered due to the complex interactions with the landmass and topography as well as the warm coastal ocean. In turn, the passage of a large-scale MJO event modulates local conditions over the MC. Previous studies have shown a strong and distinct diurnal cycle of convection over the land and nearby ocean, with an afternoon maximum over land, and a morning maximum over water. These complex interactions are still not well understood. This study aims to improve our understanding on how the resolution of distinct topographic features affects the diurnal cycle of convection in the active and suppressed MJO regimes. We use the Unified Wave Interface - a Coupled Model (UWIN-CM), a fully coupled atmosphere-ocean model to examine the effects that varying model resolution has on the representation of the MJO, the diurnal cycle of convection, and their interaction. Three model simulations of the November-December 2011 MJO event were carried out with resolutions of 12-, 4-, and 1.3-km in the fully coupled setting, and verified against TRMM and DYNAMO field campaign observations. Primary results indicate that increasing model resolution provides a better representation of the MC topography that not only improves the pattern of the diurnal cycle of convection over land. It also increases the amount of precipitation over water to values comparable to TRMM, possibly aiding the MJO's eastward propagation as shown in observational studies.

Evaluation of the sensitivity of the Amazonian diurnal cycle to convective intensity in reanalyses

NASA Astrophysics Data System (ADS)

Itterly, Kyle F.; Taylor, Patrick C.

2017-02-01

Model parameterizations of tropical deep convection are unable to reproduce the observed diurnal and spatial variability of convection in the Amazon, which contributes to climatological biases in the water cycle and energy budget. Convective intensity regimes are defined using percentiles of daily minimum 3-hourly averaged outgoing longwave radiation (OLR) from Clouds and the Earth's Radiant Energy System (CERES). This study compares the observed spatial variability of convective diurnal cycle statistics for each regime to MERRA-2 and ERA-Interim (ERA) reanalysis data sets. Composite diurnal cycle statistics are computed for daytime hours (06:00-21:00 local time) in the wet season (December-January-February). MERRA-2 matches observations more closely than ERA for domain averaged composite diurnal statistics—specifically precipitation. However, ERA reproduces mesoscale features of OLR and precipitation phase associated with topography and the propagation of the coastal squall line. Both reanalysis models are shown to underestimate extreme convection.

Evaluation of the Sensitivity of the Amazonian Diurnal Cycle to Convective Intensity in Reanalyses

NASA Technical Reports Server (NTRS)

Itterly, Kyle F.; Taylor, Patrick C.

2016-01-01

Model parameterizations of tropical deep convection are unable to reproduce the observed diurnal and spatial variability of convection in the Amazon, which contributes to climatological biases in the water cycle and energy budget. Convective intensity regimes are defined using percentiles of daily minimum 3-hourly averaged outgoing longwave radiation (OLR) from Clouds and the Earth's Radiant Energy System (CERES). This study compares the observed spatial variability of convective diurnal cycle statistics for each regime to MERRA-2 and ERA-Interim (ERA) reanalysis data sets. Composite diurnal cycle statistics are computed for daytime hours (06:00-21:00 local time) in the wet season (December-January-February). MERRA-2 matches observations more closely than ERA for domain averaged composite diurnal statistics-specifically precipitation. However, ERA reproduces mesoscale features of OLR and precipitation phase associated with topography and the propagation of the coastal squall line. Both reanalysis models are shown to underestimate extreme convection.

On the sensitivity of the diurnal cycle in the Amazon to convective intensity

PubMed Central

Taylor, Patrick C.; Dodson, Jason B.; Tawfik, Ahmed B.

2016-01-01

Abstract Climate and reanalysis models contain large water and energy budget errors over tropical land related to the misrepresentation of diurnally forced moist convection. Motivated by recent work suggesting that the water and energy budget is influenced by the sensitivity of the convective diurnal cycle to atmospheric state, this study investigates the relationship between convective intensity, the convective diurnal cycle, and atmospheric state in a region of frequent convection—the Amazon. Daily, 3‐hourly satellite observations of top of atmosphere (TOA) fluxes from Clouds and the Earth's Radiant Energy System Ed3a SYN1DEG and precipitation from Tropical Rainfall Measuring Mission 3B42 data sets are collocated with twice daily Integrated Global Radiosonde Archive observations from 2002 to 2012 and hourly flux tower observations. Percentiles of daily minimum outgoing longwave radiation are used to define convective intensity regimes. The results indicate a significant increase in the convective diurnal cycle amplitude with increased convective intensity. The TOA flux diurnal phase exhibits 1–3 h shifts with convective intensity, and precipitation phase is less sensitive. However, the timing of precipitation onset occurs 2–3 h earlier and the duration lasts 3–5 h longer on very convective compared to stable days. While statistically significant changes are found between morning atmospheric state and convective intensity, variations in upper and lower tropospheric humidity exhibit the strongest relationships with convective intensity and diurnal cycle characteristics. Lastly, convective available potential energy (CAPE) is found to vary with convective intensity but does not explain the variations in Amazonian convection, suggesting that a CAPE‐based convective parameterization will not capture the observed behavior without incorporating the sensitivity of convection to column humidity. PMID:27867784

Target Detection over the Diurnal Cycle Using a Multispectral Infrared Sensor.

PubMed

Zhao, Huijie; Ji, Zheng; Li, Na; Gu, Jianrong; Li, Yansong

2016-12-29

When detecting a target over the diurnal cycle, a conventional infrared thermal sensor might lose the target due to the thermal crossover, which could happen at any time throughout the day when the infrared image contrast between target and background in a scene is indistinguishable due to the temperature variation. In this paper, the benefits of using a multispectral-based infrared sensor over the diurnal cycle have been shown. Firstly, a brief theoretical analysis on how the thermal crossover influences a conventional thermal sensor, within the conditions where the thermal crossover would happen and why the mid-infrared (3~5 μm) multispectral technology is effective, is presented. Furthermore, the effectiveness of this technology is also described and we describe how the prototype design and multispectral technology is employed to help solve the thermal crossover detection problem. Thirdly, several targets are set up outside and imaged in the field experiment over a 24-h period. The experimental results show that the multispectral infrared imaging system can enhance the contrast of the detected images and effectively solve the failure of the conventional infrared sensor during the diurnal cycle, which is of great significance for infrared surveillance applications.

Target Detection over the Diurnal Cycle Using a Multispectral Infrared Sensor

PubMed Central

Zhao, Huijie; Ji, Zheng; Li, Na; Gu, Jianrong; Li, Yansong

2016-01-01

When detecting a target over the diurnal cycle, a conventional infrared thermal sensor might lose the target due to the thermal crossover, which could happen at any time throughout the day when the infrared image contrast between target and background in a scene is indistinguishable due to the temperature variation. In this paper, the benefits of using a multispectral-based infrared sensor over the diurnal cycle have been shown. Firstly, a brief theoretical analysis on how the thermal crossover influences a conventional thermal sensor, within the conditions where the thermal crossover would happen and why the mid-infrared (3~5 μm) multispectral technology is effective, is presented. Furthermore, the effectiveness of this technology is also described and we describe how the prototype design and multispectral technology is employed to help solve the thermal crossover detection problem. Thirdly, several targets are set up outside and imaged in the field experiment over a 24-h period. The experimental results show that the multispectral infrared imaging system can enhance the contrast of the detected images and effectively solve the failure of the conventional infrared sensor during the diurnal cycle, which is of great significance for infrared surveillance applications. PMID:28036073

Analysis of the Diurnal Cycle of Precipitation and its Relation to Cloud Radiative Forcing Using TRMM Products

NASA Technical Reports Server (NTRS)

Randall, David A.; Fowler, Laura D.; Lin, Xin

1998-01-01

In order to improve our understanding of the interactions between clouds, radiation, and the hydrological cycle simulated in the Colorado State University General Circulation Model (CSU GCM), we focused our research on the analysis of the diurnal cycle of precipitation, top-of-the-atmosphere and surface radiation budgets, and cloudiness using 10-year long Atmospheric Model Intercomparison Project (AMIP) simulations. Comparisons the simulated diurnal cycle were made against the diurnal cycle of Earth Radiation Budget Experiment (ERBE) radiation budget and International Satellite Cloud Climatology Project (ISCCP) cloud products. This report summarizes our major findings over the Amazon Basin.

Seasonal and spatial patterns in diurnal cycles in streamflow in the western United States

USGS Publications Warehouse

Lundquist, J.D.; Cayan, D.R.

2002-01-01

The diurnal cycle in streamflow constitutes a significant part of the variability in many rivers in the western United States and can be used to understand some of the dominant processes affecting the water balance of a given river basin. Rivers in which water is added diurnally, as in snowmelt, and rivers in which water is removed diurnally, as in evapotranspiration and infiltration, exhibit substantial differences in the timing, relative magnitude, and shape of their diurnal flow variations. Snowmelt-dominated rivers achieve their highest sustained flow and largest diurnal fluctuations during the spring melt season. These fluctuations are characterized by sharp rises and gradual declines in discharge each day. In large snowmelt-dominated basins, at the end of the melt season, the hour of maximum discharge shifts to later in the day as the snow line retreats to higher elevations. Many evapotranspiration/infiltration-dominated rivers in the western states achieve their highest sustained flows during the winter rainy season but exhibit their strongest diurnal cycles during summer months, when discharge is low, and the diurnal fluctuations compose a large percentage of the total flow. In contrast to snowmelt-dominated rivers, the maximum discharge in evapotranspiration/infiltration-dominated rivers occurs consistently in the morning throughout the summer. In these rivers, diurnal changes are characterized by a gradual rise and sharp decline each day.

Diurnal Thermal Cycling Effects on Backscatter of Thin Sea Ice

NASA Technical Reports Server (NTRS)

Nghiem, S. V.; Kwok, R.; Yueh, S. H.; Gow, A. J.; Perovich, D. K.; Hsu, C. C.; Ding, K. H.; Kong, J. A.; Grenfell, T. C.

1996-01-01

To invesigate effects on polarimetric backscatter of sea ice grown under diurnal cycling conditions, we carried out an experiment inJanuary 1994 at the outdoor Geophysical Research Facility in the Cold Regions Research and Engineering Laboratory.

Contemporary Model Fidelity over the Maritime Continent: Examination of the Diurnal Cycle, Synoptic, Intraseasonal and Seasonal Variability

NASA Astrophysics Data System (ADS)

Baranowski, D.; Waliser, D. E.; Jiang, X.

2016-12-01

One of the key challenges in subseasonal weather forecasting is the fidelity in representing the propagation of the Madden-Julian Oscillation (MJO) across the Maritime Continent (MC). In reality both propagating and non-propagating MJO events are observed, but in numerical forecast the latter group largely dominates. For this study, comprehensive model performances are evaluated using metrics that utilize the mean precipitation pattern and the amplitude and phase of the diurnal cycle, with a particular focus on the linkage between a model's local MC variability and its fidelity in representing propagation of the MJO and equatorial Kelvin waves across the MC. Subseasonal to seasonal variability of mean precipitation and its diurnal cycle in 20 year long climate simulations from over 20 general circulation models (GCMs) is examined to benchmark model performance. Our results show that many models struggle to represent the precipitation pattern over complex Maritime Continent terrain. Many models show negative biases of mean precipitation and amplitude of its diurnal cycle; these biases are often larger over land than over ocean. Furthermore, only a handful of models realistically represent the spatial variability of the phase of the diurnal cycle of precipitation. Models tend to correctly simulate the timing of the diurnal maximum of precipitation over ocean during local solar time morning, but fail to acknowledge influence of the land, with the timing of the maximum of precipitation there occurring, unrealistically, at the same time as over ocean. The day-to-day and seasonal variability of the mean precipitation follows observed patterns, but is often unrealistic for the diurnal cycle amplitude. The intraseasonal variability of the amplitude of the diurnal cycle of precipitation is mainly driven by model's ability (or lack of) to produce eastward propagating MJO-like signal. Our results show that many models tend to decrease apparent air-sea contrast in the mean

The impact of the diurnal cycle on the propagation of Madden-Julian Oscillation convection across the Maritime Continent

DOE PAGES

Hagos, Samson M.; Zhang, Chidong; Feng, Zhe; ...

2016-09-19

Influences of the diurnal cycle of convection on the propagation of the Madden-Julian Oscillation (MJO) across the Maritime Continent (MC) are examined using cloud-permitting regional model simulations and observations. A pair of ensembles of control (CONTROL) and no-diurnal cycle (NODC) simulations of the November 2011 MJO episode are performed. In the CONTROL simulations, the MJO signal is weakened as it propagates across the MC, with much of the convection stalling over the large islands of Sumatra and Borneo. In the NODC simulations, where the incoming shortwave radiation at the top of the atmosphere is maintained at its daily mean value,more » the MJO signal propagating across the MC is enhanced. Examination of the surface energy fluxes in the simulations indicates that in the presence of the diurnal cycle, surface downwelling shortwave radiation in CONTROL simulations is larger because clouds preferentially form in the afternoon. Furthermore, the diurnal co-variability of surface wind speed and skin temperature results in a larger sensible heat flux and a cooler land surface in CONTROL compared to NODC simulations. Here, an analysis of observations indicates that the modulation of the downwelling shortwave radiation at the surface by the diurnal cycle of cloudiness negatively projects on the MJO intraseasonal cycle and therefore disrupts the propagation of the MJO across the MC.« less

Metrics for the Diurnal Cycle of Precipitation: Toward Routine Benchmarks for Climate Models

DOE PAGES

Covey, Curt; Gleckler, Peter J.; Doutriaux, Charles; ...

2016-06-08

In this paper, metrics are proposed—that is, a few summary statistics that condense large amounts of data from observations or model simulations—encapsulating the diurnal cycle of precipitation. Vector area averaging of Fourier amplitude and phase produces useful information in a reasonably small number of harmonic dial plots, a procedure familiar from atmospheric tide research. The metrics cover most of the globe but down-weight high-latitude wintertime ocean areas where baroclinic waves are most prominent. This enables intercomparison of a large number of climate models with observations and with each other. The diurnal cycle of precipitation has features not encountered in typicalmore » climate model intercomparisons, notably the absence of meaningful “average model” results that can be displayed in a single two-dimensional map. Displaying one map per model guides development of the metrics proposed here by making it clear that land and ocean areas must be averaged separately, but interpreting maps from all models becomes problematic as the size of a multimodel ensemble increases. Global diurnal metrics provide quick comparisons with observations and among models, using the most recent version of the Coupled Model Intercomparison Project (CMIP). This includes, for the first time in CMIP, spatial resolutions comparable to global satellite observations. Finally, consistent with earlier studies of resolution versus parameterization of the diurnal cycle, the longstanding tendency of models to produce rainfall too early in the day persists in the high-resolution simulations, as expected if the error is due to subgrid-scale physics.« less

Metrics for the Diurnal Cycle of Precipitation: Toward Routine Benchmarks for Climate Models

DOE Office of Scientific and Technical Information (OSTI.GOV)

Covey, Curt; Gleckler, Peter J.; Doutriaux, Charles

In this paper, metrics are proposed—that is, a few summary statistics that condense large amounts of data from observations or model simulations—encapsulating the diurnal cycle of precipitation. Vector area averaging of Fourier amplitude and phase produces useful information in a reasonably small number of harmonic dial plots, a procedure familiar from atmospheric tide research. The metrics cover most of the globe but down-weight high-latitude wintertime ocean areas where baroclinic waves are most prominent. This enables intercomparison of a large number of climate models with observations and with each other. The diurnal cycle of precipitation has features not encountered in typicalmore » climate model intercomparisons, notably the absence of meaningful “average model” results that can be displayed in a single two-dimensional map. Displaying one map per model guides development of the metrics proposed here by making it clear that land and ocean areas must be averaged separately, but interpreting maps from all models becomes problematic as the size of a multimodel ensemble increases. Global diurnal metrics provide quick comparisons with observations and among models, using the most recent version of the Coupled Model Intercomparison Project (CMIP). This includes, for the first time in CMIP, spatial resolutions comparable to global satellite observations. Finally, consistent with earlier studies of resolution versus parameterization of the diurnal cycle, the longstanding tendency of models to produce rainfall too early in the day persists in the high-resolution simulations, as expected if the error is due to subgrid-scale physics.« less

Deep greedy learning under thermal variability in full diurnal cycles

NASA Astrophysics Data System (ADS)

Rauss, Patrick; Rosario, Dalton

2017-08-01

We study the generalization and scalability behavior of a deep belief network (DBN) applied to a challenging long-wave infrared hyperspectral dataset, consisting of radiance from several manmade and natural materials within a fixed site located 500 m from an observation tower. The collections cover multiple full diurnal cycles and include different atmospheric conditions. Using complementary priors, a DBN uses a greedy algorithm that can learn deep, directed belief networks one layer at a time and has two layers form to provide undirected associative memory. The greedy algorithm initializes a slower learning procedure, which fine-tunes the weights, using a contrastive version of the wake-sleep algorithm. After fine-tuning, a network with three hidden layers forms a very good generative model of the joint distribution of spectral data and their labels, despite significant data variability between and within classes due to environmental and temperature variation occurring within and between full diurnal cycles. We argue, however, that more questions than answers are raised regarding the generalization capacity of these deep nets through experiments aimed at investigating their training and augmented learning behavior.

Sampling of the Diurnal Cycle of Precipitation using TRMM

NASA Technical Reports Server (NTRS)

Negri, Andrew J.; Bell, Thomas L.; Xu, Li-Ming; Starr, David OC. (Technical Monitor)

2001-01-01

We examine the temporal sampling of tropical regions using observations from the Tropical Rainfall Measuring Mission (TRMM) Microwave Imager (TMI) and Precipitation Radar (PR). We conclude that PR estimates at any one hour, even using three years of data, are inadequate to describe the diurnal cycle of precipitation over regions smaller than 12 degrees, due to high spatial variability in sampling. We show that the optimum period of accumulation is four hours. Diurnal signatures display half as much sampling error when averaged over four hours of local time. A similar pattern of sampling variability is found in the TMI data, despite the TMI's wider swath and increased sampling. These results are verified using an orbital model. The sensitivity of the sampling to satellite altitude is presented, as well as sampling patterns at the new TRMM altitude of 402.5 km.

Simulated precipitation diurnal cycles over East Asia using different CAPE-based convective closure schemes in WRF model

NASA Astrophysics Data System (ADS)

Yang, Ben; Zhou, Yang; Zhang, Yaocun; Huang, Anning; Qian, Yun; Zhang, Lujun

2018-03-01

Closure assumption in convection parameterization is critical for reasonably modeling the precipitation diurnal variation in climate models. This study evaluates the precipitation diurnal cycles over East Asia during the summer of 2008 simulated with three convective available potential energy (CAPE) based closure assumptions, i.e. CAPE-relaxing (CR), quasi-equilibrium (QE), and free-troposphere QE (FTQE) and investigates the impacts of planetary boundary layer (PBL) mixing, advection, and radiation on the simulation by using the weather research and forecasting model. The sensitivity of precipitation diurnal cycle to PBL vertical resolution is also examined. Results show that the precipitation diurnal cycles simulated with different closures all exhibit large biases over land and the simulation with FTQE closure agrees best with observation. In the simulation with QE closure, the intensified PBL mixing after sunrise is responsible for the late-morning peak of convective precipitation, while in the simulation with FTQE closure, convective precipitation is mainly controlled by advection cooling. The relative contributions of different processes to precipitation formation are functions of rainfall intensity. In the simulation with CR closure, the dynamical equilibrium in the free troposphere still can be reached, implying the complex cause-effect relationship between atmospheric motion and convection. For simulations in which total CAPE is consumed for the closures, daytime precipitation decreases with increased PBL resolution because thinner model layer produces lower convection starting layer, leading to stronger downdraft cooling and CAPE consumption. The sensitivity of the diurnal peak time of precipitation to closure assumption can also be modulated by changes in PBL vertical resolution. The results of this study help us better understand the impacts of various processes on the precipitation diurnal cycle simulation.

A One-Year Study of the Diurnal Cycle of Meteorology, Clouds, and Radiation in the West African Sahel Region

DOE Office of Scientific and Technical Information (OSTI.GOV)

Marquardt-Collow, Allison; Ghate, Virendra P.; Miller, Mark A.

The diurnal cycles of meteorological and radiation variables are analyzed during the wet and dry seasons over the Sahel region of West Africa during 2006 using surface data collected by the Atmospheric Radiation Measurement (ARM) program’s Mobile Facility, satellite radiation measurements from the Geostationary Earth Radiation Budget (GERB) instrument aboard Meteosat 8, and reanalysis products from the National Center for Environmental Prediction (NCEP). The meteorological analysis builds upon past studies of the diurnal cycle in the region by incorporating diurnal cycles of lower tropospheric wind profiles, thermodynamic profiles, integrated water vapor and liquid water measurements, and cloud radar measurements ofmore » frequency and location. These meteorological measurements are complemented by 3-hour measurements of the diurnal cycles of the TOA and surface shortwave (SW) and longwave (LW) radiative fluxes and cloud radiative effects (CREs), and the atmospheric radiative flux divergence (RFD) and atmospheric CREs. Cirrus cloudiness during the dry season is shown to peak in coverage in the afternoon, while convective clouds during the wet season are shown to peak near dawn and have an afternoon minimum related to the rise of the Lifting Condensation Level into the Saharan Air Layer. The LW and SW RFDs and CREs exhibit diurnal cycles during both seasons, but there is a relatively small difference in the LW cycles during the two seasons (10-30 Wm^(-2) depending on the variable and time of day). Small differences in the TOA CREs during the two seasons are overwhelmed by large differences in the surface SW CREs, which exceed 100 Wm^(-2). A significant surface SW CRE during the wet season combined with a negligible TOA SW CRE produces a diurnal cycle in the atmospheric CRE that is modulated primarily by the SW surface CRE, peaks at midday at ~150 Wm^(-2), and varies widely from day to day.« less

Understanding the diurnal cycle in fluvial dissolved organic carbon - The interplay of in-stream residence time, day length and organic matter turnover

NASA Astrophysics Data System (ADS)

Worrall, F.; Howden, N. J. K.; Burt, T. P.

2015-04-01

There is increasing interest in characterising the diurnal fluctuation of stream solute concentrations because observed data series derived from spot samples may be highly subjective if such diurnal fluctuations are large. This can therefore lead to large uncertainties, bias or systematic errors in calculation of fluvial solute fluxes, depending upon the particular sampling regime. A simplistic approach would be to assume diurnal fluctuations are constant throughout the water year, but this study proposes diurnal cycles in stream water quality can only be interpreted in the context of stream residence time and changing day length. Three years of hourly dissolved organic carbon (DOC) concentration and flow data from the River Dee catchment (1674 km2) were analysed, and statistical analysis of the entire record shows there is no consistent diurnal cycle in the record. From the 3-year record (1095 days) there were only 96 diurnal cycles could be analysed. Cycles were quantified in terms of their: relative and absolute amplitude; duration; time to maximum concentration; asymmetry; percentile flow and in-stream residence time. The median diurnal cycle showed an amplitude that was 9.2% of the starting concentration; it was not significantly asymmetric; and occurred at the 19th percentile flow. The median DOC removal rate was 0.07 mg C/l/hr with an inter-quartile range of 0.052-0.100 mg C/l/hr. Results were interpreted as controlled by two, separate, zero-order kinetic rate laws, one for the day and one for the night. There was no single diurnal cycle present across the record, rather a number of different cycles controlled by the combination of in-stream residence time and exposure to contrasting light conditions. Over the 3-year period the average in-stream loss of DOC was 32%. The diurnal cycles evident in high resolution DOC data are interpretable, but require contextual information for their influence on in-stream processes to be understood or for them to be utilised.

The effect of the lunar cycle on fecal cortisol metabolite levels and foraging ecology of nocturnally and diurnally active spiny mice.

PubMed

Gutman, Roee; Dayan, Tamar; Levy, Ofir; Schubert, Iris; Kronfeld-Schor, Noga

2011-01-01

We studied stress hormones and foraging of nocturnal Acomys cahirinus and diurnal A. russatus in field populations as well as in two field enclosures populated by both species and two field enclosures with individuals of A. russatus alone. When alone, A. russatus individuals become also nocturnally active. We asked whether nocturnally active A. russatus will respond to moon phase and whether this response will be obtained also in diurnally active individuals. We studied giving-up densities (GUDs) in artificial foraging patches and fecal cortisol metabolite levels. Both species exhibited elevated fecal cortisol metabolite levels and foraged to higher GUDs in full moon nights; thus A. russatus retains physiological response and behavioral patterns that correlate with full moon conditions, as can be expected in nocturnal rodents, in spite of its diurnal activity. The endocrinological and behavioral response of this diurnal species to moon phase reflects its evolutionary heritage.

Effects of the diurnal cycle in solar radiation on the tropical Indian Ocean mixed layer variability during wintertime Madden-Julian Oscillations

NASA Astrophysics Data System (ADS)

Li, Yuanlong; Han, Weiqing; Shinoda, Toshiaki; Wang, Chunzai; Lien, Ren-Chieh; Moum, James N.; Wang, Jih-Wang

2013-10-01

The effects of solar radiation diurnal cycle on intraseasonal mixed layer variability in the tropical Indian Ocean during boreal wintertime Madden-Julian Oscillation (MJO) events are examined using the HYbrid Coordinate Ocean Model. Two parallel experiments, the main run and the experimental run, are performed for the period of 2005-2011 with daily atmospheric forcing except that an idealized hourly shortwave radiation diurnal cycle is included in the main run. The results show that the diurnal cycle of solar radiation generally warms the Indian Ocean sea surface temperature (SST) north of 10°S, particularly during the calm phase of the MJO when sea surface wind is weak, mixed layer is thin, and the SST diurnal cycle amplitude (dSST) is large. The diurnal cycle enhances the MJO-forced intraseasonal SST variability by about 20% in key regions like the Seychelles-Chagos Thermocline Ridge (SCTR; 55°-70°E, 12°-4°S) and the central equatorial Indian Ocean (CEIO; 65°-95°E, 3°S-3°N) primarily through nonlinear rectification. The model also well reproduced the upper-ocean variations monitored by the CINDY/DYNAMO field campaign between September-November 2011. During this period, dSST reaches 0.7°C in the CEIO region, and intraseasonal SST variability is significantly amplified. In the SCTR region where mean easterly winds are strong during this period, diurnal SST variation and its impact on intraseasonal ocean variability are much weaker. In both regions, the diurnal cycle also has a large impact on the upward surface turbulent heat flux QT and induces diurnal variation of QT with a peak-to-peak difference of O(10 W m-2).

Solar Cycle Dependence of the Diurnal Anisotropy of 0.6 TeV Cosmic-ray Intensity Observed with the Matsushiro Underground Muon Detector

NASA Astrophysics Data System (ADS)

Munakata, K.; Mizoguchi, Y.; Kato, C.; Yasue, S.; Mori, S.; Takita, M.; Kóta, J.

2010-04-01

We analyze the temporal variation of the diurnal anisotropy of sub-TeV cosmic-ray intensity observed with the Matsushiro (Japan) underground muon detector over two full solar activity cycles in 1985-2008. We find an anisotropy component in the solar diurnal anisotropy superimposed on the Compton-Getting anisotropy due to Earth's orbital motion around the Sun. The phase of this additional anisotropy is almost constant at ~15:00 local solar time corresponding to the direction perpendicular to the average interplanetary magnetic field at Earth's orbit, while the amplitude varies between a maximum (0.043% ± 0.002%) and minimum (~0.008% ± 0.002%) in a clear correlation with the solar activity. We find a significant time lag between the temporal variations of the amplitude and the sunspot number (SSN) and obtain the best correlation coefficient of +0.74 with the SSN delayed for 26 months. We suggest that this anisotropy might be interpreted in terms of the energy change due to the solar-wind-induced electric field expected for galactic cosmic rays (GCRs) crossing the wavy neutral sheet. The average amplitude of the sidereal diurnal variation over the entire period is 0.034% ± 0.003%, which is roughly one-third of the amplitude reported from air shower and deep-underground muon experiments monitoring multi-TeV GCR intensity suggesting a significant attenuation of the anisotropy due to the solar modulation. We find, on the other hand, only a weak positive correlation between the sidereal diurnal anisotropy and the solar activity cycle in which the amplitude in the "active" solar activity epoch is about twice the amplitude in the "quiet" solar activity epoch. This implies that only one-fourth of the total attenuation varies in correlation with the solar activity cycle and/or the solar magnetic cycle. We finally examine the temporal variation of the "single-band valley depth" (SBVD) quoted by the Milagro experiment and, in contrast with recent Milagro's report, we find no

A one-year study of the diurnal cycle of meteorology, clouds and radiation in the West African Sahel region

DOE PAGES

Collow, Allison B.; Ghate, Virendra P.; Miller, Mark A.; ...

2015-09-09

Here, the diurnal cycles of meteorological and radiation variables are analysed during the wet and dry seasons over the Sahel region of West Africa during 2006 using surface data collected by the Atmospheric Radiation Measurement (ARM) programme's Mobile Facility, satellite radiation measurements from the Geostationary Earth Radiation Budget (GERB) instrument aboard Meteosat 8, and reanalysis products from the National Centers for Environmental Prediction (NCEP). The meteorological analysis builds upon past studies of the diurnal cycle in the region by incorporating diurnal cycles of lower tropospheric wind profiles, thermodynamic profiles, integrated water vapour and liquid water measurements, and cloud radar measurementsmore » of frequency and location. These meteorological measurements are complemented by 3 h measurements of the diurnal cycles of the top-of-atmosphere (TOA) and surface short-wave (SW) and long-wave (LW) radiative fluxes and cloud radiative effects (CREs), and the atmospheric radiative flux divergence (RFD) and atmospheric CREs. Cirrus cloudiness during the dry season is shown to peak in coverage in the afternoon, while convective clouds during the wet season are shown to peak near dawn and have an afternoon minimum related to the rise of the lifting condensation level into the Saharan Air Layer. The LW and SW RFDs and CREs exhibit diurnal cycles during both seasons, but there is a relatively small difference in the LW cycles during the two seasons (10 – 30 W m –2 depending on the variable and time of day). Small differences in the TOA CREs during the two seasons are overwhelmed by large differences in the surface SW CREs, which exceed 100 W m –2. A significant surface SW CRE during the wet season combined with a negligible TOA SW CRE produces a diurnal cycle in the atmospheric CRE that is modulated primarily by the SW surface CRE, peaks at midday at ~150 W m –2, and varies widely from day to day.« less

A one-year study of the diurnal cycle of meteorology, clouds and radiation in the West African Sahel region

DOE Office of Scientific and Technical Information (OSTI.GOV)

Collow, Allison B.; Ghate, Virendra P.; Miller, Mark A.

Here, the diurnal cycles of meteorological and radiation variables are analysed during the wet and dry seasons over the Sahel region of West Africa during 2006 using surface data collected by the Atmospheric Radiation Measurement (ARM) programme's Mobile Facility, satellite radiation measurements from the Geostationary Earth Radiation Budget (GERB) instrument aboard Meteosat 8, and reanalysis products from the National Centers for Environmental Prediction (NCEP). The meteorological analysis builds upon past studies of the diurnal cycle in the region by incorporating diurnal cycles of lower tropospheric wind profiles, thermodynamic profiles, integrated water vapour and liquid water measurements, and cloud radar measurementsmore » of frequency and location. These meteorological measurements are complemented by 3 h measurements of the diurnal cycles of the top-of-atmosphere (TOA) and surface short-wave (SW) and long-wave (LW) radiative fluxes and cloud radiative effects (CREs), and the atmospheric radiative flux divergence (RFD) and atmospheric CREs. Cirrus cloudiness during the dry season is shown to peak in coverage in the afternoon, while convective clouds during the wet season are shown to peak near dawn and have an afternoon minimum related to the rise of the lifting condensation level into the Saharan Air Layer. The LW and SW RFDs and CREs exhibit diurnal cycles during both seasons, but there is a relatively small difference in the LW cycles during the two seasons (10 – 30 W m –2 depending on the variable and time of day). Small differences in the TOA CREs during the two seasons are overwhelmed by large differences in the surface SW CREs, which exceed 100 W m –2. A significant surface SW CRE during the wet season combined with a negligible TOA SW CRE produces a diurnal cycle in the atmospheric CRE that is modulated primarily by the SW surface CRE, peaks at midday at ~150 W m –2, and varies widely from day to day.« less

Ocean Surface Observations of the Diurnal Cycle of Turbulence with ASIP

NASA Astrophysics Data System (ADS)

Ward, Brian; Sutherland, Graig; Reverdin, Gilles; Marie, Louis; Christensen, Kai; Brostrom, Goran; Harcourt, Ramsey; Breivik, Oyvind

2015-04-01

The STRASSE field experiment was conducted in August/September 2012 as part of the Salinity Processes in the Upper Ocean Regional Study (SPURS) campaign. The average conditions during STRASSE were low wind and high insolation, which are typical for the generation of near-surface diurnal warming. We deployed the Air-Sea Interaction Profiler (ASIP), an autonomous upwardly-rising microstructure instrument capable of resolving small-scale processes close to the air-sea interface. ASIP provides direct estimates of the dissipation rate of turbulent kinetic energy, temperature, salinity, and PAR at timescales suitable for the study of diurnal processes. In combination with the ASIP data, we had shipboard meteorological data for calculation of atmospheric forcing, and a surface mounted Lagrangian ADCP for determination of the near-surface velocity. There was a strong diurnal cycle of temperature and dissipation (from ASIP) and shear (from an ADCP). As air-sea fluxes are driven by turbulence immediately at the air-sea interface, the presence of this enhanced shear-induced turbulence will enhance fluxes.

Understanding the influence of orography on the precipitation diurnal cycle and the associated atmospheric processes in the central Andes

NASA Astrophysics Data System (ADS)

Junquas, C.; Takahashi, K.; Condom, T.; Espinoza, J.-C.; Chavez, S.; Sicart, J.-E.; Lebel, T.

2018-06-01

In the tropical Andes, the identification of the present synoptic mechanisms associated with the diurnal cycle of precipitation and its interaction with orography is a key step to understand how the atmospheric circulation influences the patterns of precipitation variability on longer time-scales. In particular we aim to better understand the combination of the local and regional mechanisms controlling the diurnal cycle of summertime (DJF) precipitation in the Northern Central Andes (NCA) region of Southern Peru. A climatology of the diurnal cycle is obtained from 15 wet seasons (2000-2014) of 3-hourly TRMM-3B42 data (0.25° × 0.25°) and swath data from the TRMM-2A25 precipitation radar product (5 km × 5 km). The main findings are: (1) in the NCA region, the diurnal cycle shows a maximum precipitation occurring during the day (night) in the western (eastern) side of the Andes highlands, (2) in the valleys of the Cuzco region and in the Amazon slope of the Andes the maximum (minimum) precipitation occurs during the night (day). The WRF (Weather Research and Forecasting) regional atmospheric model is used to simulate the mean diurnal cycle in the NCA region for the same period at 27 km and 9 km horizontal grid spacing and 3-hourly output, and at 3 km only for the month of January 2010 in the Cuzco valleys. Sensitivity experiments were also performed to investigate the effect of the topography on the observed rainfall patterns. The model reproduces the main diurnal precipitation features. The main atmospheric processes identified are: (1) the presence of a regional-scale cyclonic circulation strengthening during the afternoon, (2) diurnal thermally driven circulations at local scale, including upslope (downslope) wind and moisture transport during the day (night), (3) channelization of the upslope moisture transport from the Amazon along the Apurimac valleys toward the western part of the cordillera.

Influence of Observed Diurnal Cycles of Aerosol Optical Depth on Aerosol Direct Radiative Effect

NASA Technical Reports Server (NTRS)

Arola, A.; Eck, T. F.; Huttunen, J.; Lehtinen, K. E. J.; Lindfors, A. V.; Myhre, G.; Smirinov, A.; Tripathi, S. N.; Yu, H.

2013-01-01

The diurnal variability of aerosol optical depth (AOD) can be significant, depending on location and dominant aerosol type. However, these diurnal cycles have rarely been taken into account in measurement-based estimates of aerosol direct radiative forcing (ADRF) or aerosol direct radiative effect (ADRE). The objective of our study was to estimate the influence of diurnal aerosol variability at the top of the atmosphere ADRE estimates. By including all the possible AERONET sites, we wanted to assess the influence on global ADRE estimates. While focusing also in more detail on some selected sites of strongest impact, our goal was to also see the possible impact regionally.We calculated ADRE with different assumptions about the daily AOD variability: taking the observed daily AOD cycle into account and assuming diurnally constant AOD. Moreover, we estimated the corresponding differences in ADREs, if the single AOD value for the daily mean was taken from the the Moderate Resolution Imaging Spectroradiometer (MODIS) Terra or Aqua overpass times, instead of accounting for the true observed daily variability. The mean impact of diurnal AOD variability on 24 h ADRE estimates, averaged over all AERONET sites, was rather small and it was relatively small even for the cases when AOD was chosen to correspond to the Terra or Aqua overpass time. This was true on average over all AERONET sites, while clearly there can be much stronger impact in individual sites. Examples of some selected sites demonstrated that the strongest observed AOD variability (the strongest morning afternoon contrast) does not typically result in a significant impact on 24 h ADRE. In those cases, the morning and afternoon AOD patterns are opposite and thus the impact on 24 h ADRE, when integrated over all solar zenith angles, is reduced. The most significant effect on daily ADRE was induced by AOD cycles with either maximum or minimum AOD close to local noon. In these cases, the impact on 24 h ADRE was

The impact of the diurnal cycle on the MJO over the Maritime Continent: a modeling study assimilating TRMM rain rate into global analysis

NASA Astrophysics Data System (ADS)

Oh, Ji-Hyun; Kim, Baek-Min; Kim, Kwang-Yul; Song, Hyo-Jong; Lim, Gyu-Ho

2013-02-01

In the present study, we use modeling experiments to investigate the impact of the diurnal cycle on the Madden-Julian Oscillation (MJO) during the Australian summer. Physical initialization and a nudging technique enable us to assimilate the observed Tropical Rainfall Measuring Mission (TRMM) rain rate and atmospheric variables from the National Centers for Environmental Prediction—National Center for Atmospheric Research Reanalysis 2 (R2) into the Florida State University Global Spectral Model (FSUGSM), resulting in a realistic simulation of the MJO. Model precipitation is also significantly improved by TRMM rain rate observation via the physical initialization. We assess the influence of the diurnal cycle on the MJO by modifying the diurnal component during the model integration. Model variables are nudged toward the daily averaged values from R2. Globally suppressing the diurnal cycle (NO_DIURNAL) exerts a strong impact on the Maritime Continent. The mean state of precipitation increases and intraseasonal variability becomes stronger over the region. It is well known that MJO weakens as it passes over the Maritime Continent. However, the MJO maintains its strength in the NO_DIURNAL experiment, and the diminution of diurnal signals during the integration does not change the propagating speed of the MJO. We suggest that diminishing the diurnal cycle in NO_DIURNAL consumes less moist static energy (MSE), which is required to trigger both diurnal and intraseasonal convection. Thus, the remaining MSE may play a major role along with larger convective instability and stronger lower level moisture convergence in intensifying the MJO over the Maritime Continent in the model simulation.

A Multi-Variable Approach to Diagnosing the Monthly Covariability of the Amazonian Radiative and Convective Diurnal Cycles

NASA Astrophysics Data System (ADS)

Dodson, J. B.; Taylor, P. C.

2016-12-01

The diurnal cycle of convection (CDC) greatly influences the water, radiative, and energy budgets in convectively active regions. For example, previous research of the Amazonian CDC has identified significant monthly covariability between the satellite-observed radiative and precipitation diurnal and multiple reanalysis-derived atmospheric state variables (ASVs) representing convective instability. However, disagreements between retrospective analysis products (reanalyses) over monthly ASV anomalies create significant uncertainty in the resulting covariability. Satellite observations of convective clouds can be used to characterize monthly anomalies in convective activity. CloudSat observes multiple properties of both deep convective cores and the associated anvils, and so is useful as an alternative to the use of reanalyses. CloudSat cannot observe the full diurnal cycle, but it can detect differences between daytime and nighttime convection. Initial efforts to use CloudSat data to characterize convective activity showed that the results are highly dependent on the choice of variable used to characterize the cloud. This is caused by a series of inverse relationships between convective frequency, cloud top height, radar reflectivity vertical profile, and other variables. A single, multi-variable index for convective activity based on CloudSat data may be useful to clarify the results. Principal component analysis (PCA) provides a method to create a multivariable index, where the first principal component (PC1) corresponds with convective instability. The time series of PC1 can then be used as a proxy for monthly variability in convective activity. The primary challenge presented involves determining the utility of PCA for creating a robust index for convective activity that accounts for the complex relationships of multiple convective cloud variables, and yields information about the interactions between convection, the convective environment, and radiation beyond

Specific Diurnal EMG Activity Pattern Observed in Occlusal Collapse Patients: Relationship between Diurnal Bruxism and Tooth Loss Progression

PubMed Central

Kawakami, Shigehisa; Kumazaki, Yohei; Manda, Yosuke; Oki, Kazuhiro; Minagi, Shogo

2014-01-01

Aim The role of parafunctional masticatory muscle activity in tooth loss has not been fully clarified. This study aimed to reveal the characteristic activity of masseter muscles in bite collapse patients while awake and asleep. Materials and Methods Six progressive bite collapse patients (PBC group), six age- and gender-matched control subjects (MC group), and six young control subjects (YC group) were enrolled. Electromyograms (EMG) of the masseter muscles were continuously recorded with an ambulatory EMG recorder while patients were awake and asleep. Diurnal and nocturnal parafunctional EMG activity was classified as phasic, tonic, or mixed using an EMG threshold of 20% maximal voluntary clenching. Results Highly extended diurnal phasic activity was observed only in the PBC group. The three groups had significantly different mean diurnal phasic episodes per hour, with 13.29±7.18 per hour in the PBC group, 0.95±0.97 per hour in the MC group, and 0.87±0.98 per hour in the YC group (p<0.01). ROC curve analysis suggested that the number of diurnal phasic episodes might be used to predict bite collapsing tooth loss. Conclusion Extensive bite loss might be related to diurnal masticatory muscle parafunction but not to parafunction during sleep. Clinical Relevance: Scientific rationale for study Although mandibular parafunction has been implicated in stomatognathic system breakdown, a causal relationship has not been established because scientific modalities to evaluate parafunctional activity have been lacking. Principal findings This study used a newly developed EMG recording system that evaluates masseter muscle activity throughout the day. Our results challenge the stereotypical idea of nocturnal bruxism as a strong destructive force. We found that diurnal phasic masticatory muscle activity was most characteristic in patients with progressive bite collapse. Practical implications The incidence of diurnal phasic contractions could be used for the prognostic

Rectification of the Diurnal Cycle and the Impact of Islands on the Tropical Climate

NASA Astrophysics Data System (ADS)

Cronin, T. W.; Emanuel, K.

2012-12-01

Tropical islands are observed to be rainier than nearby ocean areas, and rainfall over the islands of the Maritime Continent plays an important role in the atmospheric general circulation. Convective heating over tropical islands is also strongly modulated by the diurnal cycle of solar insolation and surface enthalpy fluxes, and convective parameterizations in general circulation models are known to reproduce the phase and amplitude of the observed diurnal cycle of convection rather poorly. Connecting these ideas suggests that poor representation of the diurnal cycle of convection and precipitation over tropical islands in climate models may be a significant source of model biases. Here, we explore how a highly idealized island, which differs only in heat capacity from the surrounding ocean, could rectify the diurnal cycle and impact the tropical climate, especially the spatial distribution of rainfall. We perform simulations of radiative-convective equilibrium with the System for Atmospheric Modeling cloud-system-resolving model, with interactive surface temperature and a varied surface heat capacity. For the case of relatively small-scale simulations, where a shallow (~5 cm) slab-ocean "swamp island" surface is embedded in a deeper (~1 m) slab-ocean domain, the precipitation rate over the island is more than double the domain average value, with island rainfall occurring primarily in a strong regular convective event each afternoon. In addition to this island precipitation enhancement, the upper troposphere also warms with the inclusion of a low- heat capacity island. We discuss two radiative mechanisms that contribute to both island precipitation enhancement and free tropospheric warming, by producing a top-of-atmosphere radiative surplus over the island. The first radiative mechanism is a clear-sky effect, related to nonlinearities in the surface energy budget, and differences in how surface energy balance is achieved over surfaces of different heat capacities

Characterizing diurnal and seasonal cycles in monsoon systems from TRMM and CEOP observations

NASA Technical Reports Server (NTRS)

Lau, William K. M.

2006-01-01

The CEOP Inter-Monsoon Study (CIMS) is one of the two main science drivers of CEOP that aims to (a) provide better understanding of fundamental physical processes in monsoon regions around the world, and (b) demonstrate the synergy and utility of CEOP data in providing a pathway for model physics evaluation and improvement. As the data collection phase for EOP-3 and EOP-4 is being completed, two full annual cycles (2003-2004) of research-quality data sets from satellites, reference sites, and model output location time series (MOLTS) have been processed and made available for data analyses and model validation studies. This article presents preliminary results of a CIMS study aimed at the characterization and intercomparison of all major monsoon systems. The CEOP reference site data proved its value in such exercises by being a powerful tool to cross-validate the TRMM data, and to intercompare with multi-model results in ongoing work. We use 6 years (1998-2003) of pentad CEOP/TRMM data with 2deg x 2.5deg latitude-longitude grid, over the domain of interests to define the monsoon climatological diurnal and annual cycles for the East Asian Monsoon (EAM), the South Asian Monsoon (SAM), the West Africa Monsoon (WAM), the North America/Mexican Monsoon (NAM), the South American Summer Monsoon (SASM) and the Australian Monsoon (AUM). As noted, the TRMM data used in the study were cross-validated using CEOP reference site data, where applicable. Results show that the observed diurnal cycle of rain peaked around late afternoon over monsoon land, and early morning over the oceans. The diurnal cycles in models tend to peak 2-3 hours earlier than observed. The seasonal cycles of the EAM and SAM show the strongest continentality, i.e, strong control by continental processes away from the ITCZ. The WAM, and the AUM shows the less continentality, i.e, strong control by the oceanic ITCZ.

Characterizing Diurnal and Seasonal Cycles in Monsoon Systems from TRMM and CEOP Observations

NASA Technical Reports Server (NTRS)

Lau, William K. M.

2007-01-01

The CEOP Inter-Monsoon Study (CIMS) is one of the two main science drivers of CEOP that aims to (a) provide better understanding of fundamental physical processes in monsoon regions around the world, and (b) demonstrate the synergy and utility of CEOP data in providing a pathway for model physics evaluation and improvement. As the data collection phase for EOP-3 and EOP-4 is being completed, two full annual cycles (2003-2004) of research-quality data sets from satellites, reference sites, and model output location time series (MOLTS) have been processed and made available for data analyses and model validation studies. This article presents preliminary results of a CIMS study aimed at the characterization and intercomparison of all major monsoon systems. The CEOP reference site data proved its value in such exercises by being a powerful tool to cross-validate the TRMM data, and to intercompare with multi-model results in ongoing work. We use 6 years (1998-2003) of pentad CEOP/TRMM data with 2 deg x 2.5 deg. latitude-longitude grid, over the domain of interests to define the monsoon climatological diurnal and annual cycles for the East Asian Monsoon (EAM), the South Asian Monsoon (SAM), the West Africa Monsoon (WAM), the North America/Mexican Monsoon (NAM), the South American Summer Monsoon (SASM) and the Australian Monsoon (AUM). As noted, the TRMM data used in the study were cross-validated using CEOP reference site data, where applicable. Results show that the observed diurnal cycle of rain peaked around late afternoon over monsoon land, and early morning over the oceans. The diurnal cycles in models tend to peak 2-3 hours earlier than observed. The seasonal cycles of the EAM and SAM show the strongest continentality, i.e, strong control by continental processes away from the ITCZ. The WAM, and the AUM shows the less continentality, i.e, strong control by the oceanic ITCZ.

Monthly variations of diurnal rainfall in north coast of West Java Indonesia during boreal winter periods

NASA Astrophysics Data System (ADS)

Yulihastin, E.; Trismidianto

2018-05-01

Diurnal rainfall during the active monsoon period is usually associated with the highest convective activity that often triggers extreme rainfall. Investigating diurnal rainfall behavior in the north coast of West Java is important to recognize the behavioral trends of data leading to such extreme events in strategic West Java because the city of Jakarta is located in this region. Variability of diurnal rainfall during the period of active monsoon on December-January-February (DJF) composite during the 2000-2016 period was investigated using hourly rainfall data from Tropical Rainfall Measuring Mission (TRMM) 3B41RT dataset. Through the Empirical Mode Decomposition method was appears that the diurnal rain cycle during February has increased significantly in its amplitude and frequency. It is simultaneously shows that the indication of extreme rainfall events is related to diurnal rain divergences during February shown through phase shifts. The diurnal, semidiurnal, and terdiurnal cycles appear on the characteristics of the DJF composite rainfall data during the 2000-2016 period.The significant increases in amplitude occurred during February are the diurnal (IMF 3) and terdiurnal (IMF 1) of rainfall cycles.

What the diurnal cycle of precipitation tells us about land-atmosphere coupling strength

NASA Astrophysics Data System (ADS)

Ferguson, Craig; Song, Hyojong; Roundy, Joshua

2015-04-01

The key attributes of a coupled forecast model are the coupling strengths between the land-atmosphere and ocean-atmosphere schemes. If a model cannot skillfully capture the diurnal cycle of clouds and precipitation, then it likely cannot be expected to yield accurate long-term climate projections. The seasonal drought forecast skill shortfalls of the U.S. NCEP Coupled Forecast System Version 2 (CFSv2) have been directly linked to its unrealistically strong land-atmosphere coupling strength. Most models can be similarly categorized, which is to say, sensitivity to the land physics (i.e., soil moisture constraints on evapotranspiration) is too strong. In nature, the land signal: noise ratio appears to be at a much lower value. Diagnosing land-atmosphere coupling strength requires at a minimum: surface soil moisture state, surface turbulent heat fluxes, and atmospheric moisture and instability. Full-on diagnosis would entail hacking into the code and inserting a number of tracers. This study addresses the question: What if, given the soil wetness anomaly, model biases in coupling sign and/or strength could be diagnosed from phase shifts in the diurnal precipitation frequency cycle? We use 34-years of output from the North American Regional Reanalysis (NARR) and North American Land Data Assimilation System Phase 2 (NLDAS-2) to investigate the variation in diurnal precipitation frequency cycle between so-called "wet-advantage" and "dry-advantage" coupling regimes over the U.S. southern Great Plains. Wet-advantage occurs when the atmospheric state is closer to the wet adiabatic rate and convection is triggered by a strong increase in the moist static energy from the surface. In contrast, dry-advantage occurs when the atmosphere is drier and the temperature profile is close to the dry adiabatic lapse rate, which favors convection over areas of large boundary layer growth due to high sensible heat fluxes at the surface. We find that there is a significant difference in the

Satellite-based Assessment of Global Warm Cloud Properties Associated with Aerosols, Atmospheric Stability, and Diurnal Cycle

NASA Technical Reports Server (NTRS)

Matsui, Toshihisa; Masunaga, Hirohiko; Kreidenweis, Sonia M.; Pielke, Roger A., Sr.; Tao, Wei-Kuo; Chin, Mian; Kaufman, Yoram J.

2006-01-01

This study examines variability in marine low cloud properties derived from semi-global observations by the Tropical Rainfall Measuring Mission (TRMM) satellite, as linked to the aerosol index (AI) and lower-tropospheric stability (LTS). AI is derived from the Moderate Resolution Imaging Spectroradiometer (Terra MODIS) sensor and the Goddard Chemistry Aerosol Radiation and Transportation (GOCART) model, and is used to represent column-integrated aerosol concentrations. LTS is derived from the NCEP/NCAR reanalysis, and represents the background thermodynamic environment in which the clouds form. Global statistics reveal that cloud droplet size tends to be smallest in polluted (high-AI) and strong inversion (high-LTS) environments. Statistical quantification shows that cloud droplet size is better correlated with AI than it is with LTS. Simultaneously, the cloud liquid water path (CLWP) tends to decrease as AI increases. This correlation does not support the hypothesis or assumption that constant or increased CLWP is associated with high aerosol concentrations. Global variability in corrected cloud albedo (CCA), the product of cloud optical depth and cloud fraction, is very well explained by LTS, while both AI and LTS are needed to explain local variability in CCA. Most of the local correlations between AI and cloud properties are similar to the results from the global statistics, while weak anomalous aerosol-cloud correlations appear locally in the regions where simultaneous high (low) AI and low (high) LTS compensate each other. Daytime diurnal cycles explain additional variability in cloud properties. CCA has the largest diurnal cycle in high-LTS regions. Cloud droplet size and CLWP have weak diurnal cycles that differ between clean and polluted environments. The combined results suggest that investigations of marine low cloud radiative forcing and its relationship to hypothesized aerosol indirect effects must consider the combined effects of aerosols

Heliospheric Modulation of Galactic Cosmic Rays; Diurnal Variability Abstract Details

NASA Astrophysics Data System (ADS)

Kalu, D. F.; Okpala, K. C.

2017-12-01

We have studied the variability of Cosmic rays flux during solar quiet days at mid and high latitudes in the Northern Hemisphere. By using the five (5) quietest days for each month and the five disturbed days for each month, the monthly mean diurnal variation of cosmic ray anisotropy have been derived for the period 1999-2015, which covers part of cycles 23, and cycle 24. This study seeks to understand the heliospheric contribution to the variation of these Cosmic rays on quietest days, three stations (Inuvik, Moscow, Rome) Neutron Monitors were employed. This study seeks to understand the important features of the high latitude and mid latitude diurnal wave, and how solar and geomagnetic activity may be influencing the wave characteristics. Cosmic ray wave characteristics were obtained by discrete Fourier transform (DFT). The mean, diurnal amplitude, phase and dispersion for each month's diurnal wave were calculated and profiled. There was clear indication that the terrestrial effect on the variability of the monthly mean was more associated with geomagnetic activity rather than rigidity of the cosmic rays. Correlation of the time series of these wave characteristic with solar and geomagnetic activity index showed better association with solar activity.

Diurnal cycling of rhizosphere bacterial communities is associated with shifts in carbon metabolism

DOE PAGES

Staley, Christopher; Ferrieri, Abigail P.; Tfaily, Malak M.; ...

2017-06-24

The circadian clock regulates plant metabolic functions and is an important component in plant health and productivity. Rhizosphere bacteria play critical roles in plant growth, health, and development and are shaped primarily by soil communities. Using Illumina next-generation sequencing and high-resolution mass spectrometry, we characterized bacterial communities of wild-type (Col-0) Arabidopsis thaliana and an acyclic line (OX34) ectopically expressing the circadian clock-associated cca1 transcription factor, relative to a soil control, to determine how cycling dynamics affected the microbial community. Microbial communities associated with Brachypodium distachyon (BD21) were also evaluated.Significantly different bacterial community structures ( P = 0.031) were observed inmore » the rhizosphere of wild-type plants between light and dark cycle samples. Furthermore, 13% of the community showed cycling, with abundances of several families, including Burkholderiaceae, Rhodospirillaceae, Planctomycetaceae, and Gaiellaceae, exhibiting fluctuation in abundances relative to the light cycle. However, limited-to-no cycling was observed in the acyclic CCAox34 line or in soil controls. Significant cycling was also observed, to a lesser extent, in Brachypodium. Functional gene inference revealed that genes involved in carbohydrate metabolism were likely more abundant in near-dawn, dark samples. Additionally, the composition of organic matter in the rhizosphere showed a significant variation between dark and light cycles.The results of this study suggest that the rhizosphere bacterial community is regulated, to some extent, by the circadian clock and is likely influenced by, and exerts influences, on plant metabolism and productivity. The timing of bacterial cycling in relation to that of Arabidopsis further suggests that diurnal dynamics influence plant-microbe carbon metabolism and exchange. Equally important, our results suggest that previous studies done without

Diurnal cycling of rhizosphere bacterial communities is associated with shifts in carbon metabolism

DOE Office of Scientific and Technical Information (OSTI.GOV)

Staley, Christopher; Ferrieri, Abigail P.; Tfaily, Malak M.

The circadian clock regulates plant metabolic functions and is an important component in plant health and productivity. Rhizosphere bacteria play critical roles in plant growth, health, and development and are shaped primarily by soil communities. Using Illumina next-generation sequencing and high-resolution mass spectrometry, we characterized bacterial communities of wild-type (Col-0) Arabidopsis thaliana and an acyclic line (OX34) ectopically expressing the circadian clock-associated cca1 transcription factor, relative to a soil control, to determine how cycling dynamics affected the microbial community. Microbial communities associated with Brachypodium distachyon (BD21) were also evaluated.Significantly different bacterial community structures ( P = 0.031) were observed inmore » the rhizosphere of wild-type plants between light and dark cycle samples. Furthermore, 13% of the community showed cycling, with abundances of several families, including Burkholderiaceae, Rhodospirillaceae, Planctomycetaceae, and Gaiellaceae, exhibiting fluctuation in abundances relative to the light cycle. However, limited-to-no cycling was observed in the acyclic CCAox34 line or in soil controls. Significant cycling was also observed, to a lesser extent, in Brachypodium. Functional gene inference revealed that genes involved in carbohydrate metabolism were likely more abundant in near-dawn, dark samples. Additionally, the composition of organic matter in the rhizosphere showed a significant variation between dark and light cycles.The results of this study suggest that the rhizosphere bacterial community is regulated, to some extent, by the circadian clock and is likely influenced by, and exerts influences, on plant metabolism and productivity. The timing of bacterial cycling in relation to that of Arabidopsis further suggests that diurnal dynamics influence plant-microbe carbon metabolism and exchange. Equally important, our results suggest that previous studies done without

Diurnal variation in martian dust devil activity

NASA Astrophysics Data System (ADS)

Chapman, R. M.; Lewis, S. R.; Balme, M.; Steele, L. J.

2017-08-01

We show that the dust devil parameterisation in use in most Mars Global Circulation Models (MGCMs) results in an unexpectedly high level of dust devil activity during morning hours. Prior expectations of the diurnal variation of Martian dust devils are based mainly upon the observed behaviour of terrestrial dust devils: i.e. that the majority occur during the afternoon. We instead find that large areas of the Martian surface experience dust devil activity during the morning in our MGCM, and that many locations experience a peak in dust devil activity before mid-sol. We find that the diurnal variation in dust devil activity is governed by near-surface wind speeds. Within the range of daylight hours, higher wind speeds tend to produce higher levels of dust devil activity, rather than the activity simply being governed by the availability of heat at the planet's surface, which peaks in early afternoon. Evidence for whether the phenomenon we observe is real or an artefact of the parameterisation is inconclusive. We compare our results with surface-based observations of Martian dust devil timings and obtain a good match with the majority of surveys. We do not find a good match with orbital observations, which identify a diurnal distribution more closely matching that of terrestrial dust devils, but orbital observations have limited temporal coverage, biased towards the early afternoon. We propose that the generally accepted description of dust devil behaviour on Mars is incomplete, and that theories of dust devil formation may need to be modified specifically for the Martian environment. Further surveys of dust devil observations are required to support any such modifications. These surveys should include both surface and orbital observations, and the range of observations must encompass the full diurnal period and consider the wider meteorological context surrounding the observations.

Simulating the convective precipitation diurnal cycle in a North American scale convection-permitting model

NASA Astrophysics Data System (ADS)

Scaff, L.; Li, Y.; Prein, A. F.; Liu, C.; Rasmussen, R.; Ikeda, K.

2017-12-01

A better representation of the diurnal cycle of convective precipitation is essential for the analysis of the energy balance and the water budget components such as runoff, evaporation and infiltration. Convection-permitting regional climate modeling (CPM) has been shown to improve the models' performance of summer precipitation, allowing to: (1) simulate the mesoscale processes in more detail and (2) to provide more insights in future changes in convective precipitation under climate change. In this work we investigate the skill of the Weather Research and Forecast model (WRF) in simulating the summer precipitation diurnal cycle over most of North America. We use 4 km horizontal grid spacing in a 13-years long current and future period. The future scenario is assuming no significant changes in large-scale weather patterns and aims to answer how the weather of the current climate would change if it would reoccur at the end of the century under a high-end emission scenario (Pseudo Global Warming). We emphasize on a region centered on the lee side of the Canadian Rocky Mountains, where the summer precipitation amount shows a regional maximum. The historical simulations are capable to correctly represent the diurnal cycle. At the lee-side of the Canadian Rockies the increase in the convective available potential energy as well as pronounced low-level moisture flux from the southeast Prairies explains the local maximum in summer precipitation. The PGW scenario shows an increase in summer precipitation amount and intensity in this region, consistently with a stronger source of moisture and convective energy.

Effects of Tropical Islands on the Diurnal Cycle of Convection and its Influence on the MJO Propagation over the Maritime Continent

NASA Astrophysics Data System (ADS)

Savarin, A.; Chen, S. S.

2017-12-01

The Madden-Julian Oscillation (MJO) is a dominant mode of intraseasonal variability in the tropics. Large-scale convection fueling the MJO is initiated over the tropical Indian Ocean and propagates eastward across the Maritime Continent (MC) and into the western Pacific. Studies have shown a strong diurnal cycle of convection over the islands and coastal seas, with an afternoon precipitation maximum over land and high terrain, and an early morning maximum over water and mountain valley areas. Observational studies have also shown that near 40-50% of MJO events cannot pass through the MC, which is known as the MC barrier effect. As an eastward-propagating MJO convective event passes over the MC, its nature may be altered due to the complex interaction with the large Islands and topography. In turn, the passage of an MJO event modulates local conditions over the MC. The diurnal cycle of convection over the MC and its modulation by the MJO are not well understood and poorly represented in global numerical prediction models. This study aims to improve our understanding of how the diurnal cycle of convection and the presence of islands of the MC affect the eastward propagation of the MJO over the region. We use an atmosphere-ocean coupled model at high resolution (4 km) over the region to to model an MJO event that occurred inNovember-December 2011. We perform three simulations, one with the 'real' islands and topography, one where islands retain their shape but the topography is flattened, and one where all the islands are replaced by water. The differences in precipitation organization and structure can help us understand how topography and presence of islands affect the diurnal cycle of convection and the eastward propagation of the MJO. We hypothesize that removing islands will result in a smoother MJO propagation due to a less strongly forced diurnal cycle of convection and lack of land, while flattening terrain will alter the diurnal cycle of convection and the

PDF-modulated visual inputs and cryptochrome define diurnal behavior in Drosophila.

PubMed

Cusumano, Paola; Klarsfeld, André; Chélot, Elisabeth; Picot, Marie; Richier, Benjamin; Rouyer, François

2009-11-01

Morning and evening circadian oscillators control the bimodal activity of Drosophila in light-dark cycles. The lateral neurons evening oscillator (LN-EO) is important for promoting diurnal activity at dusk. We found that the LN-EO autonomously synchronized to light-dark cycles through either the cryptochrome (CRY) that it expressed or the visual system. In conditions in which CRY was not activated, flies depleted for pigment-dispersing factor (PDF) or its receptor lost the evening activity and displayed reversed PER oscillations in the LN-EO. Rescue experiments indicated that normal PER cycling and the presence of evening activity relied on PDF secretion from the large ventral lateral neurons and PDF receptor function in the LN-EO. The LN-EO thus integrates light inputs and PDF signaling to control Drosophila diurnal behavior, revealing a new clock-independent function for PDF.

Evaluation of predicted diurnal cycle of precipitation after tests with convection and microphysics schemes in the Eta Model

NASA Astrophysics Data System (ADS)

Gomes, J. L.; Chou, S. C.; Yaguchi, S. M.

2012-04-01

Physics parameterizations and the model vertical and horizontal resolutions, for example, can significantly contribute to the uncertainty in the numerical weather predictions, especially at regions with complex topography. The objective of this study is to assess the influences of model precipitation production schemes and horizontal resolution on the diurnal cycle of precipitation in the Eta Model . The model was run in hydrostatic mode at 3- and 5-km grid sizes, the vertical resolution was set to 50 layers, and the time steps to 6 and 10 s, respectively. The initial and boundary conditions were taken from ERA-Interim reanalysis. Over the sea the 0.25-deg sea surface temperature from NOAA was used. The model was setup to run for each resolution over Angra dos Reis, located in the Southeast region of Brazil, for the rainy period between 18 December 2009 and 01 de January 2010, the model simulation range was 48 hours. In one set of runs the cumulus parameterization was switched off, in this case the model precipitation was fully simulated by cloud microphysics scheme, and in the other set the model was run with weak cumulus convection. The results show that as the model horizontal resolution increases from 5 to 3 km, the spatial pattern of the precipitation hardly changed, although the maximum precipitation core increased in magnitude. Daily data from automatic station data was used to evaluate the runs and shows that the diurnal cycle of temperature and precipitation were better simulated for 3 km when compared against observations. The model configuration results without cumulus convection shows a small contraction in the precipitating area and an increase in the simulated maximum values. The diurnal cycle of precipitation was better simulated with some activity of the cumulus convection scheme. The skill scores for the period and for different forecast ranges are higher at weak and moderate precipitation rates.

Diurnal Cycle of ITCZ Convection during the MJO Suppressed Phase in DYNAMO

NASA Astrophysics Data System (ADS)

Ciesielski, P. E.; Johnson, R. H.; Schubert, W. H.

2017-12-01

During the special observing period of the Dynamics of the MJO (DYNAMO) experiment, conducted over the Indian Ocean from 1 October to 30 November 2011, two sounding arrays - one north and one south of the equator, referred to here as the NSA and SSA, respectively - took 4-8 soundings/day. We augment this 3-h dataset with observations of radiation and rainfall to investigate the diurnal cycle of convection during the suppressed phase of the October MJO. During this 14-day period when convection was suppressed over the NSA but prominent over the SSA, the circulation over the sounding arrays could be characterized as a local Hadley cell embedded within a monsoonal flow. Strong rising motion was present within the ITCZ and compensating subsidence over the NSA. A prominent diurnal pulsing of this cell was observed, impacting conditions on both sides of the equator, with the cell running strongest in the early morning hours (05-08 LT) and notably weakening later in the day (17-20LT). The reduction in evening subsidence over the NSA may have assisted the moistening of the low to mid-troposphere there during the pre-onset stage of the MJO. Apparent heating Q1 within the ITCZ exhibits a diurnal evolution from early morning bottom-heavy profiles to weaker daytime top-heavy profiles. Making use of the weak temperature gradient approximation, results suggest that direct radiative effects played a dominant role in controlling diurnal variations of vertical motion and convection within the ITCZ while non-radiative processes were more prominent over the NSA.

Diurnal cycle and its modulation by Madden-Julian oscillation observed around western coast of Sumatra Island: preconditioning for offshore convection by gravity waves

NASA Astrophysics Data System (ADS)

Yokoi, S.; Mori, S.; Katsumata, M.; Yasunaga, K.; Yoneyama, K.

2016-12-01

In November-December 2015, we conducted a field campaign, named Pre-YMC (Years of the Maritime Continent), in western coastal region of Sumatra Island, during which we performed weather radar observation, 3-hourly radiosonde observation, and so forth, at Research Vessel (R/V) Mirai deployed 50 km off the coast and at a coastal city, Bengkulu. It is well known that diurnal cycle of precipitation in this region is evident and characterized by an afternoon maximum in land area and offshore migration of convective systems during nighttime to reach several hundred kilometers off the coast. The purpose of this study is to examine mechanisms responsible for the offshore migration through analysis of observational data of the field campaign. In the second half of the campaign period, convectively active phase of Madden-Julian oscillation passed over this region. The above-mentioned diurnal cycle was observed only before the arrival of the active phase, while it became obscured after that. These results are consistent with previous studies. For the period when the diurnal cycle was evident, heavy precipitation over the R/V Mirai was observed at around 2200 local time (LT). Composite analyses of the radiosonde data over the R/V Mirai reveal that, before 2200 LT, temperature in lower free troposphere and upper boundary layer decreased faster than that in lower boundary layer. Comparison of composite tendencies between potential temperature and mixing ratio suggests that this temperature decrease was likely due to adiabatic cooling caused by ascent motion. Indirect evidence for the low-level ascent is also given by comparison of horizontal wind profile between the R/V Mirai and Bengkulu. We argue that this ascent was due to gravity waves which had propagated from the direction of the land, and probably provided favorable condition for convection. These results suggest that the gravity waves played significant roles in the diurnal offshore migration in this region.

Ecotypic variability in the metabolic response of seeds to diurnal hydration-dehydration cycles and its relationship to seed vigor.

PubMed

Bai, Bing; Sikron, Noga; Gendler, Tanya; Kazachkova, Yana; Barak, Simon; Grafi, Gideon; Khozin-Goldberg, Inna; Fait, Aaron

2012-01-01

Seeds in the seed bank experience diurnal cycles of imbibition followed by complete dehydration. These conditions pose a challenge to the regulation of germination. The effect of recurring hydration-dehydration (Hy-Dh) cycles were tested on seeds from four Arabidopsis thaliana accessions [Col-0, Cvi, C24 and Ler]. Diurnal Hy-Dh cycles had a detrimental effect on the germination rate and on the final percentage of germination in Col-0, Cvi and C24 ecotypes, but not in the Ler ecotype, which showed improved vigor following the treatments. Membrane permeability measured by ion conductivity was generally increased following each Hy-Dh cycle and was correlated with changes in the redox status represented by the GSSG/GSH (oxidized/reduced glutathione) ratio. Among the ecotypes, Col-0 seeds displayed the highest membrane permeability, whilst Ler was characterized by the greatest increase in electrical conductivity following Hy-Dh cycles. Following Dh 2 and Dh 3, the respiratory activity of Ler seeds significantly increased, in contrast to the other ecotypes, indicative of a dramatic shift in metabolism. These differences were associated with accession-specific content and patterns of change of (i) cell wall-related laminaribiose and mannose; (ii) fatty acid composition, specifically of the unsaturated oleic acid and α-linoleic acid; and (iii) asparagine, ornithine and the related polyamine putrescine. Furthermore, in the Ler ecotype the content of the tricarboxylic acid (TCA) cycle intermediates fumarate, succinate and malate increased in response to dehydration, in contrast to a decrease in the other three ecotypes. These findings provide a link between seed respiration, energy metabolism, fatty acid β-oxidation, nitrogen mobilization and membrane permeability and the improved germination of Ler seeds following Hy-Dh cycles.

Diurnal cycle of greenhouse gases and biogenic hydrocarbons during summer near Cool, CA

NASA Astrophysics Data System (ADS)

Flowers, B. A.; Floerchinger, C.; Knighton, W. B.; Dubey, M. K.; Herndon, S. C.; Kelley, P.; Luke, W. T.; Shaw, W. J.; Barnard, J.; Laulainen, N.; Zaveri, R. A.

2010-12-01

Photosynthesis by forests is a large sink for atmospheric carbon dioxide (CO2) and also a large source of biogenic volatile organics (VOCs) that produce aerosols, nucleate clouds, and interact with nitrogen oxides (NOx) to produce ozone. To elucidate these complex biogeochemical mechanisms, we performed continuous high temporal resolution measurements of CO2, VOC, trace gases, and aerosol in June 2010 at the T1 site, 70 km from Sacramento, CA, during the Carbonaceous Aerosol and Radiative Effects Study (CARES) in June 2010. Throughout the month we find that diurnal profiles exhibit minima in CO2 and maxima in isoprene during daytime. Both their amplitudes are modulated strongly by cloud cover consistent with a common photosynthetic mechanism. In contrast, we find that diurnal monoterpene profiles peak at night while CO2 is at its maxima. Their amplitudes are modulated by temperature and boundary layer height. The monoterpenes and CO2 cycle show larger increases at warmer temperatures, suggesting respiration as a common driver. Additional measurements of CH4, CO, benzene, toluene, NO, NOy and O3 are used to define biogeochemical cycling of greenhouse gases and are demonstrated as a baseline for separating anthropogenic and biogenic emissions and observing transport of greenhouse gases and air pollution.

Phase Locking between Atmospheric Convectively Coupled Equatorial Kelvin Waves and the Diurnal Cycle of Precipitation over the Maritime Continent

NASA Astrophysics Data System (ADS)

Flatau, M. K.; Baranowski, D. B.; Flatau, P. J.; Matthews, A. J.

2016-12-01

Although the importance of the Maritime Continent to the global atmospheric circulation has been long recognized, many researchers have argued that scale separation prevents local processes, such as the local diurnal cycle of precipitation, from directly influencing global scale phenomena such as the variability of atmospheric circulation associated with the equatorial waves. In our study we show that in fact multiscale interactions, which link processes in local and global scales, may play a crucial role for propagation of the CCKWs, which along with the Madden-Julian Oscillation (MJO) are the main eastward propagating component of intraseasonal variability. In our study, we show that not only do CCKWs bring excess amounts of precipitation to the Maritime Continent, but events which are phase locked with the local diurnal cycle of convection have a precipitation signal up to three times larger than average. That means that CCKWs are a primary candidate for extreme precipitation events over the densely populated areas of Indonesia and Malaysia. The complex terrain created by mixture of oceans and lands within the Maritime Continent is unique: the distance between the two main land masses at the equator (islands of Sumatra and Borneo) is approximately the same as the distance travelled by a CCKW in one day. Therefore a CCKW event that is synchronized with a local diurnal cycle over Sumatra is likely to be synchronized over Borneo as well. We find that CCKWs, which are in phase with the local diurnal cycle of precipitation over Sumatra, Borneo and surrounding seas, have a 40% larger chance to successfully cross the Maritime Continent than other CCKWs. That unique feature is a likely a clear example of a multiscale interaction within the region.

Children's Diurnal Cortisol Activity during the First Year of School

ERIC Educational Resources Information Center

Yang, Pei-Jung; Lamb, Michael E.; Kappler, Gregor; Ahnert, Lieselotte

2017-01-01

The present study examined 4- to 5-year-old British children's diurnal cortisol activity during their first year of school. The children's cortisol was measured before enrollment (baseline), upon enrollment, and both 3 and 6 months after enrollment. On each day, cortisol was sampled four times, providing information about the diurnal amount of…

Diurnal Cycling Transcription Factors of Pineapple Revealed by Genome-Wide Annotation and Global Transcriptomic Analysis

PubMed Central

Sharma, Anupma; Wai, Ching Man; Ming, Ray

2017-01-01

Abstract Circadian clock provides fitness advantage by coordinating internal metabolic and physiological processes to external cyclic environments. Core clock components exhibit daily rhythmic changes in gene expression, and the majority of them are transcription factors (TFs) and transcription coregulators (TCs). We annotated 1,398 TFs from 67 TF families and 80 TCs from 20 TC families in pineapple, and analyzed their tissue-specific and diurnal expression patterns. Approximately 42% of TFs and 45% of TCs displayed diel rhythmic expression, including 177 TF/TCs cycling only in the nonphotosynthetic leaf tissue, 247 cycling only in the photosynthetic leaf tissue, and 201 cycling in both. We identified 68 TF/TCs whose cycling expression was tightly coupled between the photosynthetic and nonphotosynthetic leaf tissues. These TF/TCs likely coordinate key biological processes in pineapple as we demonstrated that this group is enriched in homologous genes that form the core circadian clock in Arabidopsis and includes a STOP1 homolog. Two lines of evidence support the important role of the STOP1 homolog in regulating CAM photosynthesis in pineapple. First, STOP1 responds to acidic pH and regulates a malate channel in multiple plant species. Second, the cycling expression pattern of the pineapple STOP1 and the diurnal pattern of malate accumulation in pineapple leaf are correlated. We further examined duplicate-gene retention and loss in major known circadian genes and refined their evolutionary relationships between pineapple and other plants. Significant variations in duplicate-gene retention and loss were observed for most clock genes in both monocots and dicots. PMID:28922793

Wheel running improves REM sleep and attenuates stress-induced flattening of diurnal rhythms in F344 rats.

PubMed

Thompson, Robert S; Roller, Rachel; Greenwood, Benjamin N; Fleshner, Monika

2016-05-01

Regular physical activity produces resistance to the negative health consequences of stressor exposure. One way that exercise may confer stress resistance is by reducing the impact of stress on diurnal rhythms and sleep; disruptions of which contribute to stress-related disease including mood disorders. Given the link between diurnal rhythm disruptions and stress-related disorders and that exercise both promotes stress resistance and is a powerful non-photic biological entrainment cue, we tested if wheel running could reduce stress-induced disruptions of sleep/wake behavior and diurnal rhythms. Adult, male F344 rats with or without access to running wheels were instrumented for biotelemetric recording of diurnal rhythms of locomotor activity, heart rate, core body temperature (CBT), and sleep (i.e. REM, NREM, and WAKE) in the presence of a 12 h light/dark cycle. Following 6 weeks of sedentary or exercise conditions, rats were exposed to an acute stressor known to disrupt diurnal rhythms and produce behaviors associated with mood disorders. Prior to stressor exposure, exercise rats had higher CBT, more locomotor activity during the dark cycle, and greater %REM during the light cycle relative to sedentary rats. NREM and REM sleep were consolidated immediately following peak running to a greater extent in exercise, compared to sedentary rats. In response to stressor exposure, exercise rats expressed higher stress-induced hyperthermia than sedentary rats. Stressor exposure disrupted diurnal rhythms in sedentary rats; and wheel running reduced these effects. Improvements in sleep and reduced diurnal rhythm disruptions following stress could contribute to the health promoting and stress protective effects of exercise.

Wheel Running Improves REM Sleep and Attenuates Stress-induced Flattening of Diurnal Rhythms in F344 Rats

PubMed Central

Thompson, Robert S.; Roller, Rachel; Greenwood, Benjamin N.; Fleshner, Monika

2016-01-01

Regular physical activity produces resistance to the negative health consequences of stressor exposure. One way that exercise may confer stress resistance is by reducing the impact of stress on diurnal rhythms and sleep; disruptions of which contribute to stress-related disease including mood disorders. Given the link between diurnal rhythm disruptions and stress-related disorders and that exercise both promotes stress resistance and is a powerful non-photic biological entrainment cue, we tested if wheel running could reduce stress-induced disruptions of sleep/wake behavior and diurnal rhythms. Adult, male F344 rats with or without access to running wheels were instrumented for biotelemetric recording of diurnal rhythms of locomotor activity, heart rate, core body temperature (CBT), and sleep (i.e. REM, NREM, and WAKE) in the presence of a 12hr light/dark cycle. Following 6 weeks of sedentary or exercise conditions, rats were exposed to an acute stressor known to disrupt diurnal rhythms and produce behaviors associated with mood disorders. Prior to stressor exposure, exercise rats had higher CBT, more locomotor activity during the dark cycle, and greater %REM during the light cycle relative to sedentary rats. NREM and REM sleep were consolidated immediately following peak running to a greater extent in exercise, compared to sedentary rats. In response to stressor exposure, exercise rats expressed higher stress-induced hyperthermia than sedentary rats. Stressor exposure disrupted diurnal rhythms in sedentary rats; and wheel running reduced these effects. Improvements in sleep and reduced diurnal rhythm disruptions following stress could contribute to the health promoting and stress protective effects of exercise. PMID:27124542

Genome-Wide RNA Polymerase II Profiles and RNA Accumulation Reveal Kinetics of Transcription and Associated Epigenetic Changes During Diurnal Cycles

PubMed Central

Gilardi, Federica; Liechti, Robin; Martin, Olivier; Harshman, Keith; Delorenzi, Mauro; Desvergne, Béatrice; Herr, Winship; Deplancke, Bart; Schibler, Ueli; Rougemont, Jacques; Guex, Nicolas; Hernandez, Nouria; Naef, Felix

2012-01-01

Interactions of cell-autonomous circadian oscillators with diurnal cycles govern the temporal compartmentalization of cell physiology in mammals. To understand the transcriptional and epigenetic basis of diurnal rhythms in mouse liver genome-wide, we generated temporal DNA occupancy profiles by RNA polymerase II (Pol II) as well as profiles of the histone modifications H3K4me3 and H3K36me3. We used these data to quantify the relationships of phases and amplitudes between different marks. We found that rhythmic Pol II recruitment at promoters rather than rhythmic transition from paused to productive elongation underlies diurnal gene transcription, a conclusion further supported by modeling. Moreover, Pol II occupancy preceded mRNA accumulation by 3 hours, consistent with mRNA half-lives. Both methylation marks showed that the epigenetic landscape is highly dynamic and globally remodeled during the 24-hour cycle. While promoters of transcribed genes had tri-methylated H3K4 even at their trough activity times, tri-methylation levels reached their peak, on average, 1 hour after Pol II. Meanwhile, rhythms in tri-methylation of H3K36 lagged transcription by 3 hours. Finally, modeling profiles of Pol II occupancy and mRNA accumulation identified three classes of genes: one showing rhythmicity both in transcriptional and mRNA accumulation, a second class with rhythmic transcription but flat mRNA levels, and a third with constant transcription but rhythmic mRNAs. The latter class emphasizes widespread temporally gated posttranscriptional regulation in the mouse liver. PMID:23209382

The Diurnal Cycle of Clouds and Precipitation at the ARM SGP Site: An Atmospheric State-Based Analysis and Error Decomposition of a Multiscale Modeling Framework Simulation

NASA Astrophysics Data System (ADS)

Zhao, Wei; Marchand, Roger; Fu, Qiang

2017-12-01

Long-term reflectivity data collected by a millimeter cloud radar at the U.S. Department of Energy (DOE) Atmospheric Radiation Measurement (ARM) Southern Great Plains (SGP) site are used to examine the diurnal cycle of clouds and precipitation and are compared with the diurnal cycle simulated by a Multiscale Modeling Framework (MMF) climate model. The study uses a set of atmospheric states that were created specifically for the SGP and for the purpose of investigating under what synoptic conditions models compare well with observations on a statistical basis (rather than using case studies or seasonal or longer time scale averaging). Differences in the annual mean diurnal cycle between observations and the MMF are decomposed into differences due to the relative frequency of states, the daily mean vertical profile of hydrometeor occurrence, and the (normalized) diurnal variation of hydrometeors in each state. Here the hydrometeors are classified as cloud or precipitation based solely on the reflectivity observed by a millimeter radar or generated by a radar simulator. The results show that the MMF does not capture the diurnal variation of low clouds well in any of the states but does a reasonable job capturing the diurnal variations of high clouds and precipitation in some states. In particular, the diurnal variations in states that occur during summer are reasonably captured by the MMF, while the diurnal variations in states that occur during the transition seasons (spring and fall) are not well captured. Overall, the errors in the annual composite are due primarily to errors in the daily mean of hydrometeor occurrence (rather than diurnal variations), but errors in the state frequency (that is, the distribution of weather states in the model) also play a significant role.

Diurnal Cycle of Convection and Interaction with the Large-Scale Circulation

NASA Technical Reports Server (NTRS)

Salby, Murry

2002-01-01

The science in this effort was scheduled in the project's 3rd and 4th years, after a long record of high-resolution Global Cloud Imagery (GCI) had been produced. Unfortunately, political disruptions that interfered with this project led to its funding being terminated after only two years of support. Nevertheless, the availability of intermediate data opened the door to a number of important scientific studies. Beyond considerations of the diurnal cycle addressed in this grant, the GCI wakes possible a wide range of studies surrounding convection, cloud and precipitation. Several are already underway with colleagues in the US and abroad, who have requested the GCI.

Diurnal Cycling Transcription Factors of Pineapple Revealed by Genome-Wide Annotation and Global Transcriptomic Analysis.

PubMed

Sharma, Anupma; Wai, Ching Man; Ming, Ray; Yu, Qingyi

2017-09-01

Circadian clock provides fitness advantage by coordinating internal metabolic and physiological processes to external cyclic environments. Core clock components exhibit daily rhythmic changes in gene expression, and the majority of them are transcription factors (TFs) and transcription coregulators (TCs). We annotated 1,398 TFs from 67 TF families and 80 TCs from 20 TC families in pineapple, and analyzed their tissue-specific and diurnal expression patterns. Approximately 42% of TFs and 45% of TCs displayed diel rhythmic expression, including 177 TF/TCs cycling only in the nonphotosynthetic leaf tissue, 247 cycling only in the photosynthetic leaf tissue, and 201 cycling in both. We identified 68 TF/TCs whose cycling expression was tightly coupled between the photosynthetic and nonphotosynthetic leaf tissues. These TF/TCs likely coordinate key biological processes in pineapple as we demonstrated that this group is enriched in homologous genes that form the core circadian clock in Arabidopsis and includes a STOP1 homolog. Two lines of evidence support the important role of the STOP1 homolog in regulating CAM photosynthesis in pineapple. First, STOP1 responds to acidic pH and regulates a malate channel in multiple plant species. Second, the cycling expression pattern of the pineapple STOP1 and the diurnal pattern of malate accumulation in pineapple leaf are correlated. We further examined duplicate-gene retention and loss in major known circadian genes and refined their evolutionary relationships between pineapple and other plants. Significant variations in duplicate-gene retention and loss were observed for most clock genes in both monocots and dicots. © The Author 2017. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

Characterization of basal gene expression trends over a diurnal cycle in Xiphophorus maculatus skin, brain and liver.

PubMed

Lu, Yuan; Reyes, Jose; Walter, Sean; Gonzalez, Trevor; Medrano, Geraldo; Boswell, Mikki; Boswell, William; Savage, Markita; Walter, Ronald

2018-06-01

Evolutionarily conserved diurnal circadian mechanisms maintain oscillating patterns of gene expression based on the day-night cycle. Xiphophorus fish have been used to evaluate transcriptional responses after exposure to various light sources and it was determined that each source incites distinct genetic responses in skin tissue. However, basal expression levels of genes that show oscillating expression patterns in day-night cycle, may affect the outcomes of such experiments, since basal gene expression levels at each point in the circadian path may influence the profile of identified light responsive genes. Lack of knowledge regarding diurnal fluctuations in basal gene expression patterns may confound the understanding of genetic responses to external stimuli (e.g., light) since the dynamic nature of gene expression implies animals subjected to stimuli at different times may be at very different stages within the continuum of genetic homeostasis. We assessed basal gene expression changes over a 24-hour period in 200 select Xiphophorus gene targets known to transcriptionally respond to various types of light exposure. We identified 22 genes in skin, 36 genes in brain and 28 genes in liver that exhibit basal oscillation of expression patterns. These genes, including known circadian regulators, produced the expected expression patterns over a 24-hour cycle when compared to circadian regulatory genes identified in other species, especially human and other vertebrate animal models. Our results suggest the regulatory network governing diurnal oscillating gene expression is similar between Xiphophorus and other vertebrates for the three Xiphophorus organs tested. In addition, we were able to categorize light responsive gene sets in Xiphophorus that do, and do not, exhibit circadian based oscillating expression patterns. Copyright © 2017 Elsevier Inc. All rights reserved.

Dependence of upper atmosphere photochemistry on the shape of the diurnal cycle of the photolysis rates

NASA Astrophysics Data System (ADS)

Montecinos, S.; Barrientos, P.

2006-03-01

A photochemical model of the atmosphere constitutes a non-linear, non-autonomous dynamical system, enforced by the Earth's rotation. Some studies have shown that the region of the mesopause tends towards non-linear responses such as period-doubling cascades and chaos. In these studies, simple go approximations for the diurnal variations of the photolysis rates are assumed. The goal of this article is to investigate what happens if the more realistic, calculated photolysis rates are introduced. It is found that, if the usual approximations-sinusoidal and step functions-are assumed, the responses of the system are similar: it converges to a 2-day periodic solution. If the more realistic, calculated diurnal cycle is introduced, a new 4-day subharmonic appear.

UV Reconstruction Algorithm And Diurnal Cycle Variability

NASA Astrophysics Data System (ADS)

Curylo, Aleksander; Litynska, Zenobia; Krzyscin, Janusz; Bogdanska, Barbara

2009-03-01

UV reconstruction is a method of estimation of surface UV with the use of available actinometrical and aerological measurements. UV reconstruction is necessary for the study of long-term UV change. A typical series of UV measurements is not longer than 15 years, which is too short for trend estimation. The essential problem in the reconstruction algorithm is the good parameterization of clouds. In our previous algorithm we used an empirical relation between Cloud Modification Factor (CMF) in global radiation and CMF in UV. The CMF is defined as the ratio between measured and modelled irradiances. Clear sky irradiance was calculated with a solar radiative transfer model. In the proposed algorithm, the time variability of global radiation during the diurnal cycle is used as an additional source of information. For elaborating an improved reconstruction algorithm relevant data from Legionowo [52.4 N, 21.0 E, 96 m a.s.l], Poland were collected with the following instruments: NILU-UV multi channel radiometer, Kipp&Zonen pyranometer, radiosonde profiles of ozone, humidity and temperature. The proposed algorithm has been used for reconstruction of UV at four Polish sites: Mikolajki, Kolobrzeg, Warszawa-Bielany and Zakopane since the early 1960s. Krzyscin's reconstruction of total ozone has been used in the calculations.

Diurnal Cycle of Surface Flows During NAME and Comparison to Model Reanalysis

NASA Astrophysics Data System (ADS)

Ciesielski, P. E.; Johnson, R. H.

2007-05-01

During the North American Monsoon Experiment (NAME) an unprecedented surface data set of winds and thermodynamic variables was collected over the core monsoon region. The surface network included 63 automated sites with 1-30 min resolution data, 27 SMN operational sites (1-3 hourly data), and 56 US operational sites (1-3 hourly data) along the northern fringe of the monsoon region. These data, along with twice daily QuikSCAT oceanic surface winds, were quality controlled and objectively analyzed on to a uniform grid with quarter-degree, 1-h resolution for the period from 1 July - 15 August. An important application of the gridded winds is their use in diagnosing surface vertical motion due to slope flows over the Sierra Madre Occidental (SMO) terrain. With this dataset we examine the diurnal characteristics of surface fields as the monsoon evolves and compare these analyses to similar surface products from the special North American Regional Reanalysis (NARR) for NAME. Observed surface fields indicate that a robust land-sea breeze circulation is present over most of Gulf of California (GOC) region in response to the strong diurnal heating of land masses on both sides of the gulf. For reasons unclear at this time, many features of this land-sea breeze circulation are missing in the NARR. Evolution of the diurnal cycle of temperature and the land- sea breeze circulation as the monsoon progresses through the season shows a strong sensitivity to rainfall over the SMO and the coastal plains. Such a relationship likely reflects changes in land surface characteristics, such as evapotranspiration and albedo, as the forests of the SMO respond to monsoonal rains.

Effects of Tropical Islands on the Diurnal Cycle of Convection and its Influence on the MJO Propagation over the Maritime Continent

NASA Astrophysics Data System (ADS)

Savarin, A.; Chen, S. S.

2017-12-01

The Madden-Julian Oscillation (MJO) is a dominant mode of intraseasonal variability in the tropics. Large-scale convection fueling the MJO is initiated over the tropical Indian Ocean and propagates eastward across the Maritime Continent (MC) and into the western Pacific. Observational studies have shown that near 40-50% of the MJO events cannot pass through the MC, which is known as the MC barrier effect. Previous studies have also shown a strong diurnal cycle of convection over the islands and coastal seas, with an afternoon precipitation maximum over land and high terrain, and an early morning maximum over water and mountain valley areas. As an eastward-propagating MJO convective event passes over the MC, its nature may be altered due to the complex interaction with the large Islands and topography. In turn, the passage of an MJO event modulates local conditions over the MC. The diurnal cycle of convection over the MC and its modulation by the MJO are not well understood and poorly represented in global numerical prediction models. This study aims to improve our understanding of how the diurnal cycle of convection and the presence of islands of the MC affect the eastward propagation of the MJO over the region. To this end, we use the Unified Wave Interface-Coupled Model (UWIN-CM) in its fully-coupled atmosphere-ocean configuration at a convection-permitting (4 km) resolution over the region. The control simulation is from the MJO event that occurred in November-December 2011, and has been verified against the Dynamics of the MJO (DYNAMO) field campaign observations, TRMM precipitation, and reanalysis products. To investigate the effects of the tropical islands on the MJO, we conduct two additional numerical experiments, one with preserved island shape but flattened topography, and one where islands are replaced by water. The difference in the diurnal cycle and convective organization among these experiments will provide some insights on the origin of the MC

Impact of topography on the diurnal cycle of summertime moist convection in idealized simulations

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hassanzadeh, Hanieh; Schmidli, Jürg; Langhans, Wolfgang

The impact of an isolated mesoscale mountain on the diurnal cycle of moist convection and its spatial variation is investigated. Convection-resolving simulations of flow over 3D Gaussian-shaped mountains are performed for a conditionally unstable atmosphere under diurnal radiative forcing. The results show considerable spatial variability in terms of timing and amount of convective precipitation. This variability relates to different physical mechanisms responsible for convection initiation in different parts of the domain. During the late morning, the mass convergence from the radiatively driven diurnal upslope flow confronting the large-scale incident background flow triggers strong convective precipitation over the mountain lee slope.more » As a consequence, instabilities in the boundary layer are swept out by the emerging cold pool in the vicinity of the mountain, and some parts over the mountain near-field receive less rainfall than the far-field. Over the latter, an unperturbed boundary-layer growth allows for sporadic convective initiation. Still, secondary convection triggered over the leading edge of the cold pool spreads some precipitation over the downstream near-field. Detailed analysis of our control simulation provides further explanation of this frequently observed precipitation pattern over mountains and adjacent plains. Sensitivity experiments indicate a significant influence of the mountain height on the precipitation pattern over the domain.« less

Impact of topography on the diurnal cycle of summertime moist convection in idealized simulations

DOE PAGES

Hassanzadeh, Hanieh; Schmidli, Jürg; Langhans, Wolfgang; ...

2015-08-31

The impact of an isolated mesoscale mountain on the diurnal cycle of moist convection and its spatial variation is investigated. Convection-resolving simulations of flow over 3D Gaussian-shaped mountains are performed for a conditionally unstable atmosphere under diurnal radiative forcing. The results show considerable spatial variability in terms of timing and amount of convective precipitation. This variability relates to different physical mechanisms responsible for convection initiation in different parts of the domain. During the late morning, the mass convergence from the radiatively driven diurnal upslope flow confronting the large-scale incident background flow triggers strong convective precipitation over the mountain lee slope.more » As a consequence, instabilities in the boundary layer are swept out by the emerging cold pool in the vicinity of the mountain, and some parts over the mountain near-field receive less rainfall than the far-field. Over the latter, an unperturbed boundary-layer growth allows for sporadic convective initiation. Still, secondary convection triggered over the leading edge of the cold pool spreads some precipitation over the downstream near-field. Detailed analysis of our control simulation provides further explanation of this frequently observed precipitation pattern over mountains and adjacent plains. Sensitivity experiments indicate a significant influence of the mountain height on the precipitation pattern over the domain.« less

Diurnal and menstrual cycles in body temperature are regulated differently: a 28-day ambulatory study in healthy women with thermal discomfort of cold extremities and controls.

PubMed

Kräuchi, Kurt; Konieczka, Katarzyna; Roescheisen-Weich, Corina; Gompper, Britta; Hauenstein, Daniela; Schoetzau, Andreas; Fraenkl, Stephan; Flammer, Josef

2014-02-01

Diurnal cycle variations in body-heat loss and heat production, and their resulting core body temperature (CBT), are relatively well investigated; however, little is known about their variations across the menstrual cycle under ambulatory conditions. The main purpose of this study was to determine whether menstrual cycle variations in distal and proximal skin temperatures exhibit similar patterns to those of diurnal variations, with lower internal heat conductance when CBT is high, i.e. during the luteal phase. Furthermore, we tested these relationships in two groups of women, with and without thermal discomfort of cold extremities (TDCE). In total, 19 healthy eumenorrheic women with regular menstrual cycles (28-32 days), 9 with habitual TDCE (ages 29 ± 1.5 year; BMI 20.1 ± 0.4) and 10 controls without these symptoms (CON: aged 27 ± 0.8 year; BMI 22.7 ± 0.6; p < 0.004 different to TDCE) took part in the study. Twenty-eight days continuous ambulatory skin temperature measurements of distal (mean of hands and feet) and proximal (mean of sternum and infraclavicular regions) skin regions, thighs, and calves were carried out under real-life, ambulatory conditions (i-Buttons® skin probes, sampling rate: 2.5 min). The distal minus proximal skin temperature gradient (DPG) provided a valuable measure for heat redistribution from the core to the shell, and, hence, for internal heat conduction. Additionally, basal body temperature was measured sublingually directly after waking up in bed. Mean diurnal amplitudes in skin temperatures increased from proximal to distal skin regions and the 24-h mean values were inversely related. TDCE compared to CON showed significantly lower hand skin temperatures and DPG during daytime. However, menstrual cycle phase did not modify these diurnal patterns, indicating that menstrual and diurnal cycle variations in skin temperatures reveal additive effects. Most striking was the finding that all measured skin

Diurnal Cycle of Convection and Interaction with the Large-Scale Circulation

NASA Technical Reports Server (NTRS)

Salby, Murry L.

2002-01-01

The science in this effort was scheduled in the project's third and fourth years, after a long record of high-resolution Global Cloud Imagery (GCI) had been produced. Unfortunately, political disruptions that interfered with this project led to its funding being terminated after only two years of support. Nevertheless, the availability of intermediate data opened the door to a number of important scientific studies. Beyond considerations of the diurnal cycle addressed in this grant, the GCI makes possible a wide range of studies surrounding convection, cloud, and precipitation. Several are already underway with colleagues in the US and abroad, including global cloud simulations, a global precipitation product, global precipitation simulations, upper tropospheric humidity, asynoptic sampling studies, convective organization studies, equatorial wave simulations, and the tropical tropopause.

Diurnal changes in ocean color sensed in satellite imagery

NASA Astrophysics Data System (ADS)

Arnone, Robert; Vandermuelen, Ryan; Soto, Inia; Ladner, Sherwin; Ondrusek, Michael; Yang, Haoping

2017-07-01

Measurements of diurnal changes in ocean color in turbid coastal regions in the Gulf of Mexico were characterized using above water spectral radiometry from a National Aeronautics and Space Administration (aerosol robotic network-WaveCIS CSI-06) site that can provide 8 to 10 observations per day. Satellite capability to detect diurnal changes in ocean color was characterized using hourly overlapping afternoon orbits of the visual infrared imaging radiometer suite (VIIRS) Suomi National Polar-orbiting Partnership ocean color sensor and validated with in situ observations. The monthly cycle of diurnal changes was investigated for different water masses using VIIRS overlaps. Results showed the capability of satellite observations to monitor hourly color changes in coastal regions that can be impacted by vertical movement of optical layers, in response to tides, resuspension, and river plume dispersion. The spatial variability of VIIRS diurnal changes showed the occurrence and displacement of phytoplankton blooming and decaying processes. The diurnal change in ocean color was above 20%, which represents a 30% change in chlorophyll-a. Seasonal changes in diurnal ocean color for different water masses suggest differences in summer and winter responses to surface processes. The diurnal changes observed using satellite ocean color can be used to define the following: surface processes associated with biological activity, vertical changes in optical depth, and advection of water masses.

Impact of the Diurnal Cycle of the Atmospheric Boundary Layer on Wind-Turbine Wakes: A Numerical Modelling Study

NASA Astrophysics Data System (ADS)

Englberger, Antonia; Dörnbrack, Andreas

2018-03-01

The wake characteristics of a wind turbine for different regimes occurring throughout the diurnal cycle are investigated systematically by means of large-eddy simulation. Idealized diurnal cycle simulations of the atmospheric boundary layer are performed with the geophysical flow solver EULAG over both homogeneous and heterogeneous terrain. Under homogeneous conditions, the diurnal cycle significantly affects the low-level wind shear and atmospheric turbulence. A strong vertical wind shear and veering with height occur in the nocturnal stable boundary layer and in the morning boundary layer, whereas atmospheric turbulence is much larger in the convective boundary layer and in the evening boundary layer. The increased shear under heterogeneous conditions changes these wind characteristics, counteracting the formation of the night-time Ekman spiral. The convective, stable, evening, and morning regimes of the atmospheric boundary layer over a homogeneous surface as well as the convective and stable regimes over a heterogeneous surface are used to study the flow in a wind-turbine wake. Synchronized turbulent inflow data from the idealized atmospheric boundary-layer simulations with periodic horizontal boundary conditions are applied to the wind-turbine simulations with open streamwise boundary conditions. The resulting wake is strongly influenced by the stability of the atmosphere. In both cases, the flow in the wake recovers more rapidly under convective conditions during the day than under stable conditions at night. The simulated wakes produced for the night-time situation completely differ between heterogeneous and homogeneous surface conditions. The wake characteristics of the transitional periods are influenced by the flow regime prior to the transition. Furthermore, there are different wake deflections over the height of the rotor, which reflect the incoming wind direction.

Modeling and Simulation of Optimal Resource Management during the Diurnal Cycle in Emiliania huxleyi by Genome-Scale Reconstruction and an Extended Flux Balance Analysis Approach.

PubMed

Knies, David; Wittmüß, Philipp; Appel, Sebastian; Sawodny, Oliver; Ederer, Michael; Feuer, Ronny

2015-10-28

The coccolithophorid unicellular alga Emiliania huxleyi is known to form large blooms, which have a strong effect on the marine carbon cycle. As a photosynthetic organism, it is subjected to a circadian rhythm due to the changing light conditions throughout the day. For a better understanding of the metabolic processes under these periodically-changing environmental conditions, a genome-scale model based on a genome reconstruction of the E. huxleyi strain CCMP 1516 was created. It comprises 410 reactions and 363 metabolites. Biomass composition is variable based on the differentiation into functional biomass components and storage metabolites. The model is analyzed with a flux balance analysis approach called diurnal flux balance analysis (diuFBA) that was designed for organisms with a circadian rhythm. It allows storage metabolites to accumulate or be consumed over the diurnal cycle, while keeping the structure of a classical FBA problem. A feature of this approach is that the production and consumption of storage metabolites is not defined externally via the biomass composition, but the result of optimal resource management adapted to the diurnally-changing environmental conditions. The model in combination with this approach is able to simulate the variable biomass composition during the diurnal cycle in proximity to literature data.

Insights into the diurnal cycle of global Earth outgoing radiation using a numerical weather prediction model

NASA Astrophysics Data System (ADS)

Gristey, Jake J.; Chiu, J. Christine; Gurney, Robert J.; Morcrette, Cyril J.; Hill, Peter G.; Russell, Jacqueline E.; Brindley, Helen E.

2018-04-01

A globally complete, high temporal resolution and multiple-variable approach is employed to analyse the diurnal cycle of Earth's outgoing energy flows. This is made possible via the use of Met Office model output for September 2010 that is assessed alongside regional satellite observations throughout. Principal component analysis applied to the long-wave component of modelled outgoing radiation reveals dominant diurnal patterns related to land surface heating and convective cloud development, respectively explaining 68.5 and 16.0 % of the variance at the global scale. The total variance explained by these first two patterns is markedly less than previous regional estimates from observations, and this analysis suggests that around half of the difference relates to the lack of global coverage in the observations. The first pattern is strongly and simultaneously coupled to the land surface temperature diurnal variations. The second pattern is strongly coupled to the cloud water content and height diurnal variations, but lags the cloud variations by several hours. We suggest that the mechanism controlling the delay is a moistening of the upper troposphere due to the evaporation of anvil cloud. The short-wave component of modelled outgoing radiation, analysed in terms of albedo, exhibits a very dominant pattern explaining 88.4 % of the variance that is related to the angle of incoming solar radiation, and a second pattern explaining 6.7 % of the variance that is related to compensating effects from convective cloud development and marine stratocumulus cloud dissipation. Similar patterns are found in regional satellite observations, but with slightly different timings due to known model biases. The first pattern is controlled by changes in surface and cloud albedo, and Rayleigh and aerosol scattering. The second pattern is strongly coupled to the diurnal variations in both cloud water content and height in convective regions but only cloud water content in marine

Results of the GABLS3 diurnal-cycle benchmark for wind energy applications

DOE Office of Scientific and Technical Information (OSTI.GOV)

Rodrigo, J. Sanz; Allaerts, D.; Avila, M.

We present results of the GABLS3 model intercomparison benchmark revisited for wind energy applications. The case consists of a diurnal cycle, measured at the 200-m tall Cabauw tower in the Netherlands, including a nocturnal low-level jet. The benchmark includes a sensitivity analysis of WRF simulations using two input meteorological databases and five planetary boundary-layer schemes. A reference set of mesoscale tendencies is used to drive microscale simulations using RANS k-ϵ and LES turbulence models. The validation is based on rotor-based quantities of interest. Cycle-integrated mean absolute errors are used to quantify model performance. The results of the benchmark are usedmore » to discuss input uncertainties from mesoscale modelling, different meso-micro coupling strategies (online vs offline) and consistency between RANS and LES codes when dealing with boundary-layer mean flow quantities. Altogether, all the microscale simulations produce a consistent coupling with mesoscale forcings.« less

Results of the GABLS3 diurnal-cycle benchmark for wind energy applications

DOE PAGES

Rodrigo, J. Sanz; Allaerts, D.; Avila, M.; ...

2017-06-13

We present results of the GABLS3 model intercomparison benchmark revisited for wind energy applications. The case consists of a diurnal cycle, measured at the 200-m tall Cabauw tower in the Netherlands, including a nocturnal low-level jet. The benchmark includes a sensitivity analysis of WRF simulations using two input meteorological databases and five planetary boundary-layer schemes. A reference set of mesoscale tendencies is used to drive microscale simulations using RANS k-ϵ and LES turbulence models. The validation is based on rotor-based quantities of interest. Cycle-integrated mean absolute errors are used to quantify model performance. The results of the benchmark are usedmore » to discuss input uncertainties from mesoscale modelling, different meso-micro coupling strategies (online vs offline) and consistency between RANS and LES codes when dealing with boundary-layer mean flow quantities. Altogether, all the microscale simulations produce a consistent coupling with mesoscale forcings.« less

Productivity Estimation of Hypersaline Microbial Mat Communities - Diurnal Cycles of Dissolved Oxygen

NASA Astrophysics Data System (ADS)

Less, G.; Cohen, Y.; Luz, B.; Lazar, B.

2002-05-01

Hypersaline microbial mat communities (MMC) are the modern equivalents of the Archean stromatolities, the first photosynthetic organisms on Earth. An estimate of their oxygen production rate is important to the understanding of oxygen evolution on Earth ca. 2 b.y.b.p. Here we use the diurnal cycle of dissolved oxygen, O2/Ar ratio and the isotopic composition of dissolved oxygen to calculate net and gross primary productivity of MMC growing in a large scale (80 m2) experimental pan. The pan is inoculated with MMC taken from the Solar Lake, Sinai, Egypt and filled with 90\\permil evaporated Red Sea water brine up to a depth of ca. 0.25 m. It is equipped with computerized flow through system that is programmed to pump pan water at selected time intervals into a sampling cell fitted with dissolved oxygen, pH, conductivity and temperature sensors connected to a datalogger. Manual brine samples were taken for calibrating the sensors, mass spectrometric analyses and for measurements of additional relevant parameters. Dissolved oxygen concentrations fluctuate during the diurnal cycle being highly supersaturated except for the end of the night. The O2 curve varies seasonally and has a typical "shark fin" shape due to the MMC metabolic response to the shape of the diurnal light curve. The dissolved oxygen data were fitted to a smooth curve that its time derivative (dO2 /dt) is defined as: Z dO2 /dt=GP-R-k(O2(meas)- O2(sat)) where z is the depth (m); GP and R are the MMC gross production and respiration (mol m-2 d-1), respectively; k is the gas exchange coefficient (m d-1); O2(meas) and O2(sat) (mol L-1) are the measured and equilibrium dissolved oxygen concentrations, respectively. The high resolution sampling of the automated system produces O2 curves that enable the calculation of smooth and reliable time derivatives. The calculations yield net production values that vary between 1,000 10-6 to -100 10-6 mol O2 m-2 h-1 and day respiration rates between 60 10-6 to 30 10

Studying the Diurnal Cycle of Convection Using a TRMM-Calibrated Infrared Rain Algorithm

NASA Technical Reports Server (NTRS)

Negri, Andrew J.

2005-01-01

The development of a satellite infrared (IR) technique for estimating convective and stratiform rainfall and its application in studying the diurnal variability of rainfall on a global scale is presented. The Convective-Stratiform Technique (CST), calibrated by coincident, physically retrieved rain rates from the Tropical Rainfall Measuring Mission (TRMM) Precipitation Radar (PR), is applied over the global tropics. The technique makes use of the IR data from the TRMM Visible/Infrared Scanner (VIRS) before application to global geosynchronous satellite data. The calibrated CST technique has the advantages of high spatial resolution (4 km), filtering of nonraining cirrus clouds, and the stratification of the rainfall into its convective and stratiform components, the last being important for the calculation of vertical profiles of latent heating. The diurnal cycle of rainfall, as well as the division between convective and Stratiform rainfall will be presented. The technique is validated using available data sets and compared to other global rainfall products such as Global Precipitation Climatology Project (GPCP) IR product, calibrated with TRMM Microwave Imager (TMI) data. Results from five years of PR data will show the global-tropical partitioning of convective and stratiform rainfall.

Evaluating the performance of ENVI-met model in diurnal cycles for different meteorological conditions

NASA Astrophysics Data System (ADS)

Acero, Juan A.; Arrizabalaga, Jon

2018-01-01

Urban areas are known to modify meteorological variables producing important differences in small spatial scales (i.e. microscale). These affect human thermal comfort conditions and the dispersion of pollutants, especially those emitted inside the urban area, which finally influence quality of life and the use of public open spaces. In this study, the diurnal evolution of meteorological variables measured in four urban spaces is compared with the results provided by ENVI-met (v 4.0). Measurements were carried out during 3 days with different meteorological conditions in Bilbao in the north of the Iberian Peninsula. The evaluation of the model accuracy (i.e. the degree to which modelled values approach measured values) was carried out with several quantitative difference metrics. The results for air temperature and humidity show a good agreement of measured and modelled values independently of the regional meteorological conditions. However, in the case of mean radiant temperature and wind speed, relevant differences are encountered highlighting the limitation of the model to estimate these meteorological variables precisely during diurnal cycles, in the considered evaluation conditions (sites and weather).

Did Adult Diurnal Activity Influence the Evolution of Wing Morphology in Opoptera Butterflies?

PubMed

Penz, C M; Heine, K B

2016-02-01

The butterfly genus Opoptera includes eight species, three of which have diurnal habits while the others are crepuscular (the usual activity period for members of the tribe Brassolini). Although never measured in the field, it is presumed that diurnal Opoptera species potentially spend more time flying than their crepuscular relatives. If a shift to diurnal habits potentially leads to a higher level of activity and energy expenditure during flight, then selection should operate on increased aerodynamic and energetic efficiency, leading to changes in wing shape. Accordingly, we ask whether diurnal habits have influenced the evolution of wing morphology in Opoptera. Using phylogenetically independent contrasts and Wilcoxon rank sum tests, we confirmed our expectation that the wings of diurnal species have higher aspect ratios (ARs) and lower wing centroids (WCs) than crepuscular congeners. These wing shape characteristics are known to promote energy efficiency during flight. Three Opoptera wing morphotypes established a priori significantly differed in AR and WC values. The crepuscular, cloud forest dweller Opoptera staudingeri (Godman & Salvin) was exceptional in having an extended forewing tip and the highest AR and lowest WC within Opoptera, possibly to facilitate flight in a cooler environment. Our study is the first to investigate how butterfly wing morphology might evolve as a response to a behavioral shift in adult time of activity.

Impact of the ocean diurnal cycle on the North Atlantic mean sea surface temperatures in a regionally coupled model

NASA Astrophysics Data System (ADS)

Guemas, Virginie; Salas-Mélia, David; Kageyama, Masa; Giordani, Hervé; Voldoire, Aurore

2013-03-01

This study investigates the mechanisms by which the ocean diurnal cycle can affect the ocean mean state in the North Atlantic region. We perform two ocean-atmosphere regionally coupled simulations (20°N-80°N, 80°W-40°E) using the CNRMOM1D ocean model coupled to the ARPEGE4 atmospheric model: one with a 1 h coupling frequency (C1h) and another with a 24 h coupling frequency (C24h). The comparison between both experiments shows that accounting for the ocean diurnal cycle tends to warm up the surface ocean at high latitudes and cool it down in the subtropics during the boreal summer season (June-August). In the subtropics, the leading cause for the formation of the negative surface temperature anomalies is the fact that the nocturnal entrainment heat flux overcompensates the diurnal absorption of solar heat flux. Both in the subtropics and in the high latitudes, the surface temperature anomalies are involved in a positive feedback loop: the cold (warm) surface anomalies favour a decrease (increase) in evaporation, a decrease (increase) in tropospheric humidity, a decrease (increase) in downwelling longwave radiative flux which in turn favours the surface cooling (warming). Furthermore, the decrease in meridional sea surface temperature gradient affects the large-scale atmospheric circulation by a decrease in the zonal mean flow.

The contribution of the pineal gland on daily rhythms and masking in diurnal grass rats, Arvicanthis niloticus.

PubMed

Shuboni, Dorela D; Agha, Amna A; Groves, Thomas K H; Gall, Andrew J

2016-07-01

Melatonin is a hormone rhythmically secreted at night by the pineal gland in vertebrates. In diurnal mammals, melatonin is present during the inactive phase of the rest/activity cycle, and in primates it directly facilitates sleep and decreases body temperature. However, the role of the pineal gland for the promotion of sleep at night has not yet been studied in non-primate diurnal mammalian species. Here, the authors directly examined the hypothesis that the pineal gland contributes to diurnality in Nile grass rats by decreasing activity and increasing sleep at night, and that this could occur via effects on circadian mechanisms or masking, or both. Removing the pineal gland had no effect on the hourly distribution of activity across a 12:12 light-dark (LD) cycle or on the patterns of sleep-like behavior at night. Masking effects of light at night on activity were also not significantly different in pinealectomized and control grass rats, as 1h pulses of light stimulated increases in activity of sham and pinealectomized animals to a similar extent. In addition, the circadian regulation of activity was unaffected by the surgical condition of the animals. Our results suggest that the pineal gland does not contribute to diurnality in the grass rat, thus highlighting the complexity of temporal niche transitions. The current data raise interesting questions about how and why genetic and neural mechanisms linking melatonin to sleep regulatory systems might vary among mammals that reached a diurnal niche via parallel and independent pathways. Copyright © 2016 Elsevier B.V. All rights reserved.

Sulfur redox chemistry governs diurnal antimony and arsenic cycles at Champagne Pool, Waiotapu, New Zealand

NASA Astrophysics Data System (ADS)

Ullrich, Maria K.; Pope, James G.; Seward, Terry M.; Wilson, Nathaniel; Planer-Friedrich, Britta

2013-07-01

Champagne Pool, a sulfidic hot spring in New Zealand, exhibits distinct diurnal variations in antimony (Sb) and arsenic (As) concentrations, with daytime high and night-time low concentrations. To identify the underlying mobilization mechanisms, five sites along the drainage channel of Champagne Pool were sampled every 2 h during a 24 h period. Temporal variations in elemental concentrations and Sb, As, and sulfur (S) speciation were monitored in the discharging fluid. Total trace element concentrations in filtered and unfiltered samples were analyzed using ICP-MS, and Sb, As and S species were determined by IC-ICP-MS. Sulfur speciation in the drainage channel was dominated by thiosulfate and sulfide at night, while sulfate dominated during the day. The distinct diurnal changes suggest that the transformations are caused by phototrophic sulfur-oxidizing bacteria. These bacteria metabolize thiosulfate and sulfide in daylight to form sulfate and, as suggested by modeling with PhreeqC, elemental sulfur. Sulfide consumption during the day results in undersaturation of antimony sulfides, which triggers the additional release of dissolved Sb. For As, diurnal cycles were much more pronounced in speciation than in total concentrations, with di- and trithioarsenate forming at night due to excess sulfide, and monothioarsenate forming from arsenite and elemental sulfur during the day. Sulfur speciation was thus found to control Sb and As in terms of both solubility and speciation.

Formation and Persistence of Brine on Mars: Experimental Simulations throughout the Diurnal Cycle at the Phoenix Landing Site.

PubMed

Fischer, E; Martínez, G M; Rennó, N O

2016-12-01

In the last few years, water ice and salts capable of melting this ice and producing liquid saline water (brine) have been detected on Mars. Moreover, indirect evidence for brine has been found in multiple areas of the planet. Here, we simulate full diurnal cycles of temperature and atmospheric water vapor content at the Phoenix landing site for the first time and show experimentally that, in spite of the low Mars-like chamber temperature, brine forms minutes after the ground temperature exceeds the eutectic temperature of salts in contact with water ice. Moreover, we show that the brine stays liquid for most of the diurnal cycle when enough water ice is available to compensate for evaporation. This is predicted to occur seasonally in areas of the polar region where the temperature exceeds the eutectic value and frost or snow is deposited on saline soils, or where water ice and salts coexist in the shallow subsurface. This is important because the existence of liquid water is a key requirement for habitability. Key Words: Mars-Ice-Perchlorates-Brine-Water-Raman spectroscopy. Astrobiology 16, 937-948.

Formation and Persistence of Brine on Mars: Experimental Simulations throughout the Diurnal Cycle at the Phoenix Landing Site

NASA Astrophysics Data System (ADS)

Fischer, E.; Martínez, G. M.; Rennó, N. O.

2016-12-01

In the last few years, water ice and salts capable of melting this ice and producing liquid saline water (brine) have been detected on Mars. Moreover, indirect evidence for brine has been found in multiple areas of the planet. Here, we simulate full diurnal cycles of temperature and atmospheric water vapor content at the Phoenix landing site for the first time and show experimentally that, in spite of the low Mars-like chamber temperature, brine forms minutes after the ground temperature exceeds the eutectic temperature of salts in contact with water ice. Moreover, we show that the brine stays liquid for most of the diurnal cycle when enough water ice is available to compensate for evaporation. This is predicted to occur seasonally in areas of the polar region where the temperature exceeds the eutectic value and frost or snow is deposited on saline soils, or where water ice and salts coexist in the shallow subsurface. This is important because the existence of liquid water is a key requirement for habitability.

Sampling Considerations for Designing Aedes aegypti (Diptera: Culicidae) Oviposition Studies in Iquitos, Peru: Substrate Preference, Diurnal Periodicity, and Gonotrophic Cycle Length

PubMed Central

WONG, JACKLYN; ASTETE, HELVIO; MORRISON, AMY C.; SCOTT, THOMAS W.

2011-01-01

When devising methods to sample Aedes aegypti (L.) eggs from naturally-occurring containers to investigate selective oviposition, failure to take into account certain aspects of Ae. aegypti behavior can bias study inferences. In Iquitos, Peru, we tested three assumptions related to designing Ae. aegypti oviposition field studies, as follows: 1) lining containers with paper as an oviposition substrate does not affect oviposition; 2) diurnal egg-laying activity peaks in the late afternoon or early evening, and there is little oviposition during midday; and 3) the gonotrophic cycle length of wild females averages from 3 to 4 d. When wild females were presented with containers lined and unlined with paper toweling, the presence of paper increased oviposition in plastic and metal containers, but had no effect in cement containers. Recording the number of eggs laid by Ae. aegypti every 2 h throughout the day delineated a bimodal diurnal oviposition pattern, with a small morning peak, decreased activity during midday, and a predominant peak in the late afternoon and evening from 16:00 to 20:00 h. Daily monitoring of captive individual F0 females revealed that the gonotrophic cycle length was typically 3– 4 d for the Iquitos population. These findings will be used to adjust field study design to 1) account for sampling eggs using paper toweling, and 2) determine the time of day and number of days over which to sample Ae. aegypti eggs. We explored how failure to consider these behaviors could potentially bias field assessments of oviposition preferences. PMID:21337947

The trehalose pathway in maize: conservation and gene regulation in response to the diurnal cycle and extended darkness

PubMed Central

Henry, Clémence; Bledsoe, Samuel W.; Siekman, Allison; Kollman, Alec; Waters, Brian M.; Feil, Regina; Stitt, Mark; Lagrimini, L. Mark

2014-01-01

Energy resources in plants are managed in continuously changing environments, such as changes occurring during the day/night cycle. Shading is an environmental disruption that decreases photosynthesis, compromises energy status, and impacts on crop productivity. The trehalose pathway plays a central but not well-defined role in maintaining energy balance. Here, we characterized the maize trehalose pathway genes and deciphered the impacts of the diurnal cycle and disruption of the day/night cycle on trehalose pathway gene expression and sugar metabolism. The maize genome encodes 14 trehalose-6-phosphate synthase (TPS) genes, 11 trehalose-6-phosphate phosphatase (TPP) genes, and one trehalase gene. Transcript abundance of most of these genes was impacted by the day/night cycle and extended dark stress, as were sucrose, hexose sugars, starch, and trehalose-6-phosphate (T6P) levels. After extended darkness, T6P levels inversely followed class II TPS and sucrose non-fermenting-related protein kinase 1 (SnRK1) target gene expression. Most significantly, T6P no longer tracked sucrose levels after extended darkness. These results showed: (i) conservation of the trehalose pathway in maize; (ii) that sucrose, hexose, starch, T6P, and TPS/TPP transcripts respond to the diurnal cycle; and(iii) that extended darkness disrupts the correlation between T6P and sucrose/hexose pools and affects SnRK1 target gene expression. A model for the role of the trehalose pathway in sensing of sucrose and energy status in maize seedlings is proposed. PMID:25271261

Diurnal Variation in Gravity Wave Activity at Low and Middle Latitudes

NASA Technical Reports Server (NTRS)

Andrioli, V. F.; Fritts, D. C.; Batista, P. P.; Clemesha, B. R.; Janches, Diego

2013-01-01

We employ a modified composite day extension of the Hocking (2005) analysis method to study gravity wave (GW) activity in the mesosphere and lower thermosphere using 4 meteor radars spanning latitudes from 7deg S to 53.6deg S. Diurnal and semidiurnal modulations were observed in GW variances over all sites. Semidiurnal modulation with downward phase propagation was observed at lower latitudes mainly near the equinoxes. Diurnal modulations occur mainly near solstice and, except for the zonal component at Cariri (7deg S), do not exhibit downward phase propagation. At a higher latitude (SAAMER, 53.6deg S) these modulations are only observed in the meridional component where we can observe diurnal variation from March to May, and semidiurnal, during January, February, October (above 88 km) and November. Some of these modulations with downward phase progression correlate well with wind shear. When the wind shear is well correlated with the maximum of the variances the diurnal tide has its largest amplitudes, i.e., near equinox. Correlations exhibiting variations with tidal phases suggest significant GW-tidal interactions that have different characters depending on the tidal components and possible mean wind shears. Modulations that do not exhibit phase variations could be indicative of diurnal variations in GW sources.

The trehalose pathway in maize: conservation and gene regulation in response to the diurnal cycle and extended darkness.

PubMed

Henry, Clémence; Bledsoe, Samuel W; Siekman, Allison; Kollman, Alec; Waters, Brian M; Feil, Regina; Stitt, Mark; Lagrimini, L Mark

2014-11-01

Energy resources in plants are managed in continuously changing environments, such as changes occurring during the day/night cycle. Shading is an environmental disruption that decreases photosynthesis, compromises energy status, and impacts on crop productivity. The trehalose pathway plays a central but not well-defined role in maintaining energy balance. Here, we characterized the maize trehalose pathway genes and deciphered the impacts of the diurnal cycle and disruption of the day/night cycle on trehalose pathway gene expression and sugar metabolism. The maize genome encodes 14 trehalose-6-phosphate synthase (TPS) genes, 11 trehalose-6-phosphate phosphatase (TPP) genes, and one trehalase gene. Transcript abundance of most of these genes was impacted by the day/night cycle and extended dark stress, as were sucrose, hexose sugars, starch, and trehalose-6-phosphate (T6P) levels. After extended darkness, T6P levels inversely followed class II TPS and sucrose non-fermenting-related protein kinase 1 (SnRK1) target gene expression. Most significantly, T6P no longer tracked sucrose levels after extended darkness. These results showed: (i) conservation of the trehalose pathway in maize; (ii) that sucrose, hexose, starch, T6P, and TPS/TPP transcripts respond to the diurnal cycle; and(iii) that extended darkness disrupts the correlation between T6P and sucrose/hexose pools and affects SnRK1 target gene expression. A model for the role of the trehalose pathway in sensing of sucrose and energy status in maize seedlings is proposed. © The Author 2014. Published by Oxford University Press on behalf of the Society for Experimental Biology.

Range of monthly mean hourly land surface air temperature diurnal cycle over high northern latitudes

NASA Astrophysics Data System (ADS)

Wang, Aihui; Zeng, Xubin

2014-05-01

Daily maximum and minimum temperatures over global land are fundamental climate variables, and their difference represents the diurnal temperature range (DTR). While the differences between the monthly averaged DTR (MDTR) and the range of monthly averaged hourly temperature diurnal cycle (RMDT) are easy to understand qualitatively, their differences have not been quantified over global land areas. Based on our newly developed in situ data (Climatic Research Unit) reanalysis (Modern-Era Retrospective analysis for Research and Applications) merged hourly temperature data from 1979 to 2009, RMDT in January is found to be much smaller than that in July over high northern latitudes, as it is much more affected by the diurnal radiative forcing than by the horizontal advection of temperature. In contrast, MDTR in January is comparable to that in July over high northern latitudes, but it is much larger than January RMDT, as it primarily reflects the movement of lower frequency synoptic weather systems. The area-averaged RMDT trends north of 40°N are near zero in November, December, and January, while the trends of MDTR are negative. These results suggest the need to use both the traditional MDTR and RMDT suggested here in future observational and modeling studies. Furthermore, MDTR and its trend are more sensitive to the starting hour of a 24 h day used in the calculations than those for RMDT, and this factor also needs to be considered in model evaluations using observational data.

Formation and Persistence of Brine on Mars: Experimental Simulations throughout the Diurnal Cycle at the Phoenix Landing Site

PubMed Central

Martínez, G.M.; Rennó, N.O.

2016-01-01

Abstract In the last few years, water ice and salts capable of melting this ice and producing liquid saline water (brine) have been detected on Mars. Moreover, indirect evidence for brine has been found in multiple areas of the planet. Here, we simulate full diurnal cycles of temperature and atmospheric water vapor content at the Phoenix landing site for the first time and show experimentally that, in spite of the low Mars-like chamber temperature, brine forms minutes after the ground temperature exceeds the eutectic temperature of salts in contact with water ice. Moreover, we show that the brine stays liquid for most of the diurnal cycle when enough water ice is available to compensate for evaporation. This is predicted to occur seasonally in areas of the polar region where the temperature exceeds the eutectic value and frost or snow is deposited on saline soils, or where water ice and salts coexist in the shallow subsurface. This is important because the existence of liquid water is a key requirement for habitability. Key Words: Mars—Ice—Perchlorates—Brine—Water—Raman spectroscopy. Astrobiology 16, 937–948. PMID:27912028

Evidence for a GPR18 Role in Diurnal Regulation of Intraocular Pressure

PubMed Central

Miller, Sally; Leishman, Emma; Oehler, Olivia; Daily, Laura; Murataeva, Natalia; Wager-Miller, Jim; Bradshaw, Heather; Straiker, Alex

2016-01-01

Purpose The diurnal cycling of intraocular pressure (IOP) was first described in humans more than a century ago. This cycling is preserved in other species. The physiologic underpinning of this diurnal variation in IOP remains a mystery, even though elevated pressure is indicated in most forms of glaucoma, a common cause of blindness. Once identified, the system that underlies diurnal variation would represent a natural target for therapeutic intervention. Methods Using normotensive mice, we measured the regulation of ocular lipid species by the enzymes fatty acid amide hydrolase (FAAH) and N-arachidonoyl phosphatidylethanolamine phospholipase (NAPE-PLD), mRNA expression of these enzymes, and their functional role in diurnal regulation of IOP. Results We now report that NAPE-PLD and FAAH mice do not exhibit a diurnal cycling of IOP. These enzymes produce and break down acylethanolamines, including the endogenous cannabinoid anandamide. The diurnal lipid profile in mice shows that levels of most N-acyl ethanolamines and, intriguingly, N-arachidonoyl glycine (NAGly), decline at night: NAGly is a metabolite of arachidonoyl ethanolamine and a potent agonist at GPR18 that lowers intraocular pressure. The GPR18 blocker O1918 raises IOP during the day when pressure is low, but not at night. Quantitative PCR analysis shows that FAAH mRNA levels rise with pressure, suggesting that FAAH mediates the changes in pressure. Conclusions Our results support FAAH-dependent NAGly action at GPR18 as the physiologic basis of the diurnal variation of intraocular pressure in mice. PMID:27893106

Cellular trade-offs and optimal resource allocation during cyanobacterial diurnal growth

PubMed Central

Knoop, Henning; Bockmayr, Alexander; Steuer, Ralf

2017-01-01

Cyanobacteria are an integral part of Earth’s biogeochemical cycles and a promising resource for the synthesis of renewable bioproducts from atmospheric CO2. Growth and metabolism of cyanobacteria are inherently tied to the diurnal rhythm of light availability. As yet, however, insight into the stoichiometric and energetic constraints of cyanobacterial diurnal growth is limited. Here, we develop a computational framework to investigate the optimal allocation of cellular resources during diurnal phototrophic growth using a genome-scale metabolic reconstruction of the cyanobacterium Synechococcus elongatus PCC 7942. We formulate phototrophic growth as an autocatalytic process and solve the resulting time-dependent resource allocation problem using constraint-based analysis. Based on a narrow and well-defined set of parameters, our approach results in an ab initio prediction of growth properties over a full diurnal cycle. The computational model allows us to study the optimality of metabolite partitioning during diurnal growth. The cyclic pattern of glycogen accumulation, an emergent property of the model, has timing characteristics that are in qualitative agreement with experimental findings. The approach presented here provides insight into the time-dependent resource allocation problem of phototrophic diurnal growth and may serve as a general framework to assess the optimality of metabolic strategies that evolved in phototrophic organisms under diurnal conditions. PMID:28720699

The semi-diurnal cycle of dissipation in a ROFI: model-measurement comparisons

NASA Astrophysics Data System (ADS)

Simpson, John H.; Burchard, Hans; Fisher, Neil R.; Rippeth, Tom P.

2002-07-01

The Liverpool Bay Region of Freshwater Influence in the Irish Sea exhibits strong horizontal gradients which interact with the dominant tidal flow. A 25 h series of measurements of the cycle of turbulent dissipation with the FLY dissipation profiler shows a strong asymmetry between ebb and flood which is associated with a cycle of increasing stratification on the ebb and progressive mixing on the flood which results in vertical homogeneity as high water is approached. At this time strong dissipation extends throughout the water column in contrast to the ebb when there is a near shutdown of dissipation in the upper half of the column. The cycle of stratification and dissipation is closely consistent for the two semi-diurnal tidal cycles observed. We have attempted to simulate this situation, which involves a complex suite of processes including tidal straining and mixing, using a version of the k-ɛ closure scheme in a 1-d dynamical model which is forced by a combination of the observed tidal flow and horizontal temperature and salinity gradients. The latter were measured directly at the end of the observational series but, in order to focus on the cycle of dissipation, the correct reproduction of the temperature and salinity cycle can be assured by a nudging procedure which obliges the model temperature and salinity values to track the observations. With or without this procedure, the model gives a reasonable account of the dissipation and its asymmetric behaviour on ebb and flood although nudging improves the timing of peak dissipation in the upper part of the water column near highwater. The model has also been used to examine the ratio of shear production (P/ɛ) and buoyancy inputs to dissipation (B/ɛ). The variation of these quantities over the tidal cycle confirms the important role of convective motions forced by tidal straining near the end of the flood phase of the tide.

On the Sensitivity of the Diurnal Cycle in the Amazon to Convective Intensity

NASA Technical Reports Server (NTRS)

Itterly, Kyle; Taylor, Patrick

2015-01-01

This presentation uses publicly available CERES and radiosonde data to investigate the sensitivity of thetropical convective diurnal cycle to atmosphere state. Averaging surface observations into regimes of convective intensitydefined by satellite shows great promise for physical understandingof convection.• Convective processes in the Amazon are highly variable seasonallyand locally.• Buoyancy/CIN more important JJA– Mesoscale/synoptic features easier to separate– Length/depth of buoyancy layer very important in DJF (EL).• Moisture more important DJF, esp. UTH– Humidity of lower atmosphere significantly impacts LTS, LCL and abilityfor parcels to reach LFC.• Lower level jet strength/direction important• Convective initiation correlated with LTS, LR, LTH, EL• Duration/Phase better correlated with humidity variables• Surface Flux amplitude well correlated with convection

Modeling the diurnal cycle of carbon monoxide: Sensitivity to physics, chemistry, biology, and optics

NASA Astrophysics Data System (ADS)

Gnanadesikan, Anand

1996-05-01

As carbon monoxide within the oceanic surface layer is produced by solar radiation, diluted by mixing, consumed by biota, and outgassed to the atmosphere, it exhibits a diurnal cycle. The effect of dilution and mixing on this cycle is examined using a simple model for production and consumption, coupled to three different mixed layer models. The magnitude and timing of the peak concentration, the magnitude of the average concentration, and the air-sea flux are considered. The models are run through a range of heating and wind stress and compared to experimental data reported by Kettle [1994]. The key to the dynamics is the relative size of four length scales; Dmix, the depth to which mixing occurs over the consumption time; L, the length scale over which production occurs; Lout, the depth to which the mixed layer is ventilated over the consumption time; and Lcomp, the depth to which the diurnal production can maintain a concentration in equilibrium with the atmosphere. If Dmix ≫ L, the actual model parameterization can be important. If the mixed layer is maintained by turbulent diffusion, Dmix can be substantially less than the mixed layer depth. If the mixed layer is parameterized as a homogeneous slab, Dmix is equivalent to the mixed layer depth. If Dmix > Lout, production is balanced by consumption rather than outgassing. The ratio between Dmix and Lcomp determines whether the ocean is a source or a sink for CO. The main thermocline depth H sets an upper limit for Dmix and hence Dmix/L, Dmix/Lout, and Dmix/Lcomp. The models are run to simulate a single day of observations. The mixing parameterization is shown to be very important, with a model which mixes using small-scale diffusion, producing markedly larger surface concentrations than models which homogenize the mixed layer completely and instantaneously.

Diurnal Human Activity and Introduced Species Affect Occurrence of Carnivores in a Human-Dominated Landscape.

PubMed

Moreira-Arce, Dario; Vergara, Pablo M; Boutin, Stan

2015-01-01

Diurnal human activity and domestic dogs in agro-forestry mosaics should theoretically modify the diurnal habitat use patterns of native carnivores, with these effects being scale-dependent. We combined intensive camera trapping data with Bayesian occurrence probability models to evaluate both diurnal and nocturnal patterns of space use by carnivores in a mosaic of land-use types in southern Chile. A total of eight carnivores species were recorded, including human-introduced dogs. During the day the most frequently detected species were the culpeo fox and the cougar. Conversely, during the night, the kodkod and chilla fox were the most detected species. The best supported models showed that native carnivores responded differently to landscape attributes and dogs depending on both the time of day as well as the spatial scale of landscape attributes. The positive effect of native forest cover at 250 m and 500 m radius buffers was stronger during the night for the Darwin's fox and cougar. Road density at 250 m scale negatively affected the diurnal occurrence of Darwin´s fox, whereas at 500 m scale roads had a stronger negative effect on the diurnal occurrence of Darwin´s foxes and cougars. A positive effect of road density on dog occurrence was evidenced during both night and day. Patch size had a positive effect on cougar occurrence during night whereas it affected negatively the occurrence of culpeo foxes and skunks during day. Dog occurrence had a negative effect on Darwin's fox occurrence during day-time and night-time, whereas its negative effect on the occurrence of cougar was evidenced only during day-time. Carnivore occurrences were not influenced by the proximity to a conservation area. Our results provided support for the hypothesis that diurnal changes to carnivore occurrence were associated with human and dog activity. Landscape planning in our study area should be focused in reducing both the levels of diurnal human activity in native forest remnants

Diurnal Human Activity and Introduced Species Affect Occurrence of Carnivores in a Human-Dominated Landscape

PubMed Central

Moreira-Arce, Dario; Vergara, Pablo M.; Boutin, Stan

2015-01-01

Diurnal human activity and domestic dogs in agro-forestry mosaics should theoretically modify the diurnal habitat use patterns of native carnivores, with these effects being scale-dependent. We combined intensive camera trapping data with Bayesian occurrence probability models to evaluate both diurnal and nocturnal patterns of space use by carnivores in a mosaic of land-use types in southern Chile. A total of eight carnivores species were recorded, including human-introduced dogs. During the day the most frequently detected species were the culpeo fox and the cougar. Conversely, during the night, the kodkod and chilla fox were the most detected species. The best supported models showed that native carnivores responded differently to landscape attributes and dogs depending on both the time of day as well as the spatial scale of landscape attributes. The positive effect of native forest cover at 250m and 500 m radius buffers was stronger during the night for the Darwin's fox and cougar. Road density at 250m scale negatively affected the diurnal occurrence of Darwin´s fox, whereas at 500m scale roads had a stronger negative effect on the diurnal occurrence of Darwin´s foxes and cougars. A positive effect of road density on dog occurrence was evidenced during both night and day. Patch size had a positive effect on cougar occurrence during night whereas it affected negatively the occurrence of culpeo foxes and skunks during day. Dog occurrence had a negative effect on Darwin's fox occurrence during day-time and night-time, whereas its negative effect on the occurrence of cougar was evidenced only during day-time. Carnivore occurrences were not influenced by the proximity to a conservation area. Our results provided support for the hypothesis that diurnal changes to carnivore occurrence were associated with human and dog activity. Landscape planning in our study area should be focused in reducing both the levels of diurnal human activity in native forest remnants and

Day and night: diurnal phase influences the response to chronic mild stress

PubMed Central

Aslani, Shilan; Harb, Mazen R.; Costa, Patricio S.; Almeida, Osborne F. X.; Sousa, Nuno; Palha, Joana A.

2014-01-01

Chronic mild stress (CMS) protocols are widely used to create animal models of depression. Despite this, the inconsistencies in the reported effects may be indicative of crucial differences in methodology. Here, we considered the time of the diurnal cycle in which stressors are applied as a possible relevant temporal variable underlying the association between stress and behavior. Most laboratories test behavior during the light phase of the diurnal cycle, which corresponds to the animal's resting period. Here, rats stressed either in their resting (light phase) or active (dark phase) periods were behaviorally characterized in the light phase. When exposure to CMS occurred during the light phase of the day cycle, rats displayed signs of depressive and anxiety-related behaviors. This phenotype was not observed when CMS was applied during the dark (active) period. Interestingly, although no differences in spatial and reference memory were detected (Morris water maze) in animals in either stress period, those stressed in the light phase showed marked impairments in the probe test. These animals also showed significant dendritic atrophy in the hippocampal dentate granule neurons, with a decrease in the number of spines. Taken together, the observations reported demonstrate that the time in which stress is applied has differential effects on behavioral and neurostructural phenotypes. PMID:24672446

Climatology of diurnal tide and its long-term variability in the lower middle atmosphere over a tropical station

NASA Astrophysics Data System (ADS)

Kumar, P. Vinay; Dutta, Gopa; Mohammad, Salauddin; Rao, B. Venkateswara

2017-10-01

ECMWF reanalysis (ERA-interim) data of winds for two solar cycles (1991-2012) are harmonically analyzed to delineate the characteristics and variability of diurnal tide over a tropical site (13.5° N, 79.5° E). The diurnal cycle horizontal winds measured by Gadanki (13.5° N, 79.2° E) mesosphere-stratosphere-troposphere (MST) radar between May 2005 and April 2006 have been used to compute 24 h tidal amplitudes and phases and compared with the corresponding results obtained from ERA winds. The climatological diurnal tidal amplitudes and phases have been estimated from surface to ˜33 km using ERA interim data. The amplitudes and phases obtained in the present study are found to compare reasonably well with Global Scale Wave Model (GSWM-09). Diurnal tides show larger amplitudes in the lower troposphere below 5 km during summer and in the mid-stratosphere mainly during equinoctial months and early winter. Water vapor and convection in the lower troposphere are observed to play major roles in exciting 24-h tide. Correlations between diurnal amplitude and integrated water vapor and between diurnal amplitude and outgoing longwave radiation (OLR) are 0.59 and -0.34, respectively. Ozone mixing ratio correlates ( ρ = 0.66) well with diurnal amplitude and shows annual variation in the troposphere whereas semi-annual variation is observed at stratospheric heights with stronger peaks in equinoctial months. A clear annual variation of diurnal amplitude is displayed in the troposphere and interannual variability becomes prominent in the stratosphere which could be partly due to the influence of equatorial stratospheric QBO. The influence of solar activity on diurnal oscillations is found to be insignificant.

Radiative Effects of the Diurnal Cycle of Clouds and their Response to Climate Change

NASA Astrophysics Data System (ADS)

Yin, J.; Porporato, A. M.

2017-12-01

Clouds effectively control the Earth's energy budget by reflecting solar radiation and restricting the terrestrial one. While these dynamics have been regarded as one of vexing problem in understanding the climate system and have thus attracted much attention in the literature, less research has been devoted to the diurnal cycle of clouds (DCC). Here we first quantify the mean, amplitude, and phase of the cloud cycles in current climate models and compare them with satellite observations and reanalysis data. We show that the mean values appear to be reliable but the amplitude and phase of the DCC are less consistent. These inconsistencies are interpreted using a minimalist radiative balance model to demonstrate their impacts on surface temperature. The DCC radiative impacts are then analyzed in terms of phase shift and amplitude modulation of DCC and their so-called cloud radiative effects are estimated directly from climate model outputs. This allows us to show that DCC variations may account for up to 10-20% of the total cloud radiative impacts, calling for increased attention to the temporal evolution of the DCC in climate models.

Diurnal variation in middle-atmospheric ozone observed by ground-based microwave radiometry at Ny-Ålesund over 1 year

NASA Astrophysics Data System (ADS)

Schranz, Franziska; Fernandez, Susana; Kämpfer, Niklaus; Palm, Mathias

2018-03-01

We present an analysis of the diurnal ozone cycle from 1 year of continuous ozone measurements from two ground-based microwave radiometers in the Arctic. The instruments GROMOS-C and OZORAM are located at the AWIPEV research base at Ny-Ålesund, Svalbard (79° N, 12° E), and gathered a comprehensive time series of middle-atmospheric ozone profiles with a high time resolution. An intercomparison was performed with EOS MLS and ozone sonde measurements and simulations with SD-WACCM. The measured data sets were used to study the photochemically induced diurnal cycle of ozone in the stratosphere and mesosphere. Throughout the year the insolation in the Arctic changes drastically from polar night to polar day. Accordingly, the seasonal variations in the diurnal ozone cycle are large. In the stratosphere we found a diurnal cycle throughout the entire period of polar day with the largest amplitude in April. In the mesosphere a diurnal cycle was detected in spring and fall. SD-WACCM has been proven to capture the diurnal cycle well and was therefore used to analyse the chemical reaction rates of ozone production and loss at equinox and summer solstice. Furthermore GROMOS-C proved capable of measuring the tertiary ozone layer above Ny-Ålesund in winter.

Spatial Variability of the Background Diurnal Cycle of Deep Convection around the GoAmazon2014/5 Field Campaign Sites

DOE Office of Scientific and Technical Information (OSTI.GOV)

Burleyson, Casey D.; Feng, Zhe; Hagos, Samson M.

The Amazon rainforest is one of a few regions of the world where continental tropical deep convection occurs. The Amazon’s isolation makes it challenging to observe, but also creates a unique natural laboratory to study anthropogenic impacts on clouds and precipitation in an otherwise pristine environment. Extensive measurements were made upwind and downwind of the large city of Manaus, Brazil during the Observations and Modeling of the Green Ocean Amazon 2014-2015 (GoAmazon2014/5) field campaign. In this study, 15 years of high-resolution satellite data are analyzed to examine the spatial and diurnal variability of convection occurring around the GoAmazon2014/5 sites. Interpretationmore » of anthropogenic differences between the upwind (T0) and downwind (T1-T3) sites is complicated by naturally-occurring spatial variability between the sites. During the rainy season, the inland propagation of the previous day’s sea-breeze front happens to be in phase with the background diurnal cycle near Manaus, but is out of phase elsewhere. Enhanced convergence between the river-breezes and the easterly trade winds generates up to 10% more frequent deep convection at the GoAmazon2014/5 sites east of the river (T0a, T0t/k, and T1) compared to the T3 site which was located near the western bank. In general, the annual and diurnal cycles during 2014 were representative of the 2000-2013 distributions. The only exceptions were in March when the monthly mean rainrate was above the 95th percentile and September when both rain frequency and intensity were suppressed. The natural spatial variability must be accounted for before interpreting anthropogenically-induced differences among the GoAmazon2014/5 sites.« less

Diurnal cortisol amplitude and fronto-limbic activity in response to stressful stimuli

PubMed Central

Cunningham-Bussel, Amy C.; Root, James C.; Butler, Tracy; Tuescher, Oliver; Pan, Hong; Epstein, Jane; Weisholtz, Daniel S.; Pavony, Michelle; Silverman, Michael E.; Goldstein, Martin S.; Altemus, Margaret; Cloitre, Marylene; LeDoux, Joseph; McEwen, Bruce; Stern, Emily; Silbersweig, David

2014-01-01

Summary The development and exacerbation of many psychiatric and neurologic conditions are associated with dysregulation of the hypothalamic pituitary adrenal (HPA) axis as measured by aberrant levels of cortisol secretion. Here we report on the relationship between the amplitude of diurnal cortisol secretion, measured across 3 typical days in 18 healthy individuals, and blood oxygen level dependant (BOLD) response in limbic fear/stress circuits, elicited by in-scanner presentation of emotionally negative stimuli, specifically, images of the World Trade Center (WTC) attack. Results indicate that subjects who secrete a greater amplitude of cortisol diurnally demonstrate less brain activation in limbic regions, including the amygdala and hippocampus/parahippocampus, and hypothalamus during exposure to traumatic WTC-related images. Such initial findings can begin to link our understanding, in humans, of the relationship between the diurnal amplitude of a hormone integral to the stress response, and those neuroanatomical regions that are implicated as both modulating and being modulated by that response. PMID:19135805

Coupled mesoscale-LES modeling of a diurnal cycle during the CWEX-13 field campaign: From weather to boundary-layer eddies

DOE Office of Scientific and Technical Information (OSTI.GOV)

Munoz-Esparza, Domingo; Lundquist, Julie K.; Sauer, Jeremy A.

Multiscale modeling of a diurnal cycle of real-world conditions is presented for the first time, validated using data from the CWEX-13 field experiment. Dynamical downscaling from synoptic-scale down to resolved three-dimensional eddies in the atmospheric boundary layer (ABL) was performed, spanning 4 orders of magnitude in horizontal grid resolution: from 111 km down to 8.2 m (30 m) in stable (convective) conditions. Computationally efficient mesoscale-to-microscale transition was made possible by the generalized cell perturbation method with time-varying parameters derived from mesoscale forcing conditions, which substantially reduced the fetch to achieve fully developed turbulence. In addition, careful design of the simulationsmore » was made to inhibit the presence of under-resolved convection at convection-resolving mesoscale resolution and to ensure proper turbulence representation in stably-stratified conditions. Comparison to in situ wind-profiling lidar and near-surface sonic anemometer measurements demonstrated the ability to reproduce the ABL structure throughout the entire diurnal cycle with a high degree of fidelity. The multiscale simulations exhibit realistic atmospheric features such as convective rolls and global intermittency. Also, the diurnal evolution of turbulence was accurately simulated, with probability density functions of resolved turbulent velocity fluctuations nearly identical to the lidar measurements. Explicit representation of turbulence in the stably-stratified ABL was found to provide the right balance with larger scales, resulting in the development of intra-hour variability as observed by the wind lidar; this variability was not captured by the mesoscale model. Furthermore, multiscale simulations improved mean ABL characteristics such as horizontal velocity, vertical wind shear, and turbulence.« less

Coupled mesoscale-LES modeling of a diurnal cycle during the CWEX-13 field campaign: From weather to boundary-layer eddies

DOE PAGES

Munoz-Esparza, Domingo; Lundquist, Julie K.; Sauer, Jeremy A.; ...

2017-04-25

Multiscale modeling of a diurnal cycle of real-world conditions is presented for the first time, validated using data from the CWEX-13 field experiment. Dynamical downscaling from synoptic-scale down to resolved three-dimensional eddies in the atmospheric boundary layer (ABL) was performed, spanning 4 orders of magnitude in horizontal grid resolution: from 111 km down to 8.2 m (30 m) in stable (convective) conditions. Computationally efficient mesoscale-to-microscale transition was made possible by the generalized cell perturbation method with time-varying parameters derived from mesoscale forcing conditions, which substantially reduced the fetch to achieve fully developed turbulence. In addition, careful design of the simulationsmore » was made to inhibit the presence of under-resolved convection at convection-resolving mesoscale resolution and to ensure proper turbulence representation in stably-stratified conditions. Comparison to in situ wind-profiling lidar and near-surface sonic anemometer measurements demonstrated the ability to reproduce the ABL structure throughout the entire diurnal cycle with a high degree of fidelity. The multiscale simulations exhibit realistic atmospheric features such as convective rolls and global intermittency. Also, the diurnal evolution of turbulence was accurately simulated, with probability density functions of resolved turbulent velocity fluctuations nearly identical to the lidar measurements. Explicit representation of turbulence in the stably-stratified ABL was found to provide the right balance with larger scales, resulting in the development of intra-hour variability as observed by the wind lidar; this variability was not captured by the mesoscale model. Furthermore, multiscale simulations improved mean ABL characteristics such as horizontal velocity, vertical wind shear, and turbulence.« less

Wind speed response of marine non-precipitating stratocumulus clouds over a diurnal cycle in cloud-system resolving simulations

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kazil, Jan; Feingold, Graham; Yamaguchi, Takanobu

Observed and projected trends in large-scale wind speed over the oceans prompt the question: how do marine stratocumulus clouds and their radiative properties respond to changes in large-scale wind speed? Wind speed drives the surface fluxes of sensible heat, moisture, and momentum and thereby acts on cloud liquid water path (LWP) and cloud radiative properties. We present an investigation of the dynamical response of non-precipitating, overcast marine stratocumulus clouds to different wind speeds over the course of a diurnal cycle, all else equal. In cloud-system resolving simulations, we find that higher wind speed leads to faster boundary layer growth and strongermore » entrainment. The dynamical driver is enhanced buoyant production of turbulence kinetic energy (TKE) from latent heat release in cloud updrafts. LWP is enhanced during the night and in the morning at higher wind speed, and more strongly suppressed later in the day. Wind speed hence accentuates the diurnal LWP cycle by expanding the morning–afternoon contrast. The higher LWP at higher wind speed does not, however, enhance cloud top cooling because in clouds with LWP ≳50 gm –2, longwave emissions are insensitive to LWP. This leads to the general conclusion that in sufficiently thick stratocumulus clouds, additional boundary layer growth and entrainment due to a boundary layer moistening arises by stronger production of TKE from latent heat release in cloud updrafts, rather than from enhanced longwave cooling. Here, we find that large-scale wind modulates boundary layer decoupling. At nighttime and at low wind speed during daytime, it enhances decoupling in part by faster boundary layer growth and stronger entrainment and in part because shear from large-scale wind in the sub-cloud layer hinders vertical moisture transport between the surface and cloud base. With increasing wind speed, however, in decoupled daytime conditions, shear-driven circulation due to large-scale wind takes over from

Wind speed response of marine non-precipitating stratocumulus clouds over a diurnal cycle in cloud-system resolving simulations

DOE PAGES

Kazil, Jan; Feingold, Graham; Yamaguchi, Takanobu

2016-05-12

Observed and projected trends in large-scale wind speed over the oceans prompt the question: how do marine stratocumulus clouds and their radiative properties respond to changes in large-scale wind speed? Wind speed drives the surface fluxes of sensible heat, moisture, and momentum and thereby acts on cloud liquid water path (LWP) and cloud radiative properties. We present an investigation of the dynamical response of non-precipitating, overcast marine stratocumulus clouds to different wind speeds over the course of a diurnal cycle, all else equal. In cloud-system resolving simulations, we find that higher wind speed leads to faster boundary layer growth and strongermore » entrainment. The dynamical driver is enhanced buoyant production of turbulence kinetic energy (TKE) from latent heat release in cloud updrafts. LWP is enhanced during the night and in the morning at higher wind speed, and more strongly suppressed later in the day. Wind speed hence accentuates the diurnal LWP cycle by expanding the morning–afternoon contrast. The higher LWP at higher wind speed does not, however, enhance cloud top cooling because in clouds with LWP ≳50 gm –2, longwave emissions are insensitive to LWP. This leads to the general conclusion that in sufficiently thick stratocumulus clouds, additional boundary layer growth and entrainment due to a boundary layer moistening arises by stronger production of TKE from latent heat release in cloud updrafts, rather than from enhanced longwave cooling. Here, we find that large-scale wind modulates boundary layer decoupling. At nighttime and at low wind speed during daytime, it enhances decoupling in part by faster boundary layer growth and stronger entrainment and in part because shear from large-scale wind in the sub-cloud layer hinders vertical moisture transport between the surface and cloud base. With increasing wind speed, however, in decoupled daytime conditions, shear-driven circulation due to large-scale wind takes over from

Synthesis and degradation of nitrate reductase during the cell cycle of Chlorella sorokiniana

NASA Technical Reports Server (NTRS)

Velasco, P. J.; Tischner, R.; Huffaker, R. C.; Whitaker, J. R.

1989-01-01

Studies on the diurnal variations of nitrate reductase (NR) activity during the life cycle of synchronized Chlorella sorokiniana cells grown with a 7:5 light-dark cycle showed that the NADH:NR activity, as well as the NR partial activities NADH:cytochrome c reductase and reduced methyl viologen:NR, closely paralleled the appearance and disappearance of NR protein as shown by sodium dodecyl sulfate gel electrophoresis and immunoblots. Results of pulse-labeling experiments with [35S]methionine further confirmed that diurnal variations of the enzyme activities can be entirely accounted for by the concomitant synthesis and degradation of the NR protein.

A diurnal animation of thermal images from a day-night pair

USGS Publications Warehouse

Watson, K.

2000-01-01

Interpretation of thermal images is often complicated because the physical property information is contained in both the spatial and temporal variations of the data and thermal models are necessary to extract and display this information. A linearized radiative transfer solution to the surface flux has been used to derive a function that is invariant with respect to thermal inertia. This relationship makes it possible to predict the temperature variation at any time in the diurnal cycle using only two distinct measurements (e.g., noon and midnight). An animation can then be constructed from a pair of day-night images to view both the spatial and temporal temperature changes throughout the diurnal cycle. A more complete solution for the invariant function, using the method of Laplace transforms and based on the linearized solution, was introduced. These results indicate that the linear model does not provide a sufficiently accurate estimate. Using standard conditions (latitude 30??, solar declination 0??, acquisition times at noon and midnight), this new relationship was used to predict temperature throughout the diurnal cycle to an rms error of 0.2??C, which is close to the system noise of most thermal scanners. The method was further extended to include the primary effects of topographic slope with similar accuracy. The temperature was computed at 48 equally spaced times in the diurnal cycle with this algorithm using a co-registered day and night TIMS (Thermal Infrared Multispectral Scanner) data pair (330 pixels, 450 lilies) acquired of the Carlin, Nevada, area and a co-registered DEM (Digital Elevation Model). (Any reader can view the results by downloading the animation file from an identified tip site). The results illustrate the power of animation to display subtle temporal and spatial temperature changes, which can provide clues to structural controls and material property differences. This 'visual change' approach could significantly increase the use of

Differential arousal regulation by prokineticin 2 signaling in the nocturnal mouse and the diurnal monkey.

PubMed

Zhou, Qun-Yong; Burton, Katherine J; Neal, Matthew L; Qiao, Yu; Kanthasamy, Anumantha G; Sun, Yanjun; Xu, Xiangmin; Ma, Yuanye; Li, Xiaohan

2016-08-18

The temporal organization of activity/rest or sleep/wake rhythms for mammals is regulated by the interaction of light/dark cycle and circadian clocks. The neural and molecular mechanisms that confine the active phase to either day or night period for the diurnal and the nocturnal mammals are unclear. Here we report that prokineticin 2, previously shown as a circadian clock output molecule, is expressed in the intrinsically photosensitive retinal ganglion cells, and the expression of prokineticin 2 in the intrinsically photosensitive retinal ganglion cells is oscillatory in a clock-dependent manner. We further show that the prokineticin 2 signaling is required for the activity and arousal suppression by light in the mouse. Between the nocturnal mouse and the diurnal monkey, a signaling receptor for prokineticin 2 is differentially expressed in the retinorecipient suprachiasmatic nucleus and the superior colliculus, brain projection targets of the intrinsically photosensitive retinal ganglion cells. Blockade with a selective antagonist reveals the respectively inhibitory and stimulatory effect of prokineticin 2 signaling on the arousal levels for the nocturnal mouse and the diurnal monkey. Thus, the mammalian diurnality or nocturnality is likely determined by the differential signaling of prokineticin 2 from the intrinsically photosensitive retinal ganglion cells onto their retinorecipient brain targets.

Modeling diurnal land temperature cycles over Los Angeles using downscaled GOES imagery

NASA Astrophysics Data System (ADS)

Weng, Qihao; Fu, Peng

2014-11-01

Land surface temperature is a key parameter for monitoring urban heat islands, assessing heat related risks, and estimating building energy consumption. These environmental issues are characterized by high temporal variability. A possible solution from the remote sensing perspective is to utilize geostationary satellites images, for instance, images from Geostationary Operational Environmental System (GOES) and Meteosat Second Generation (MSG). These satellite systems, however, with coarse spatial but high temporal resolution (sub-hourly imagery at 3-10 km resolution), often limit their usage to meteorological forecasting and global climate modeling. Therefore, how to develop efficient and effective methods to disaggregate these coarse resolution images to a proper scale suitable for regional and local studies need be explored. In this study, we propose a least square support vector machine (LSSVM) method to achieve the goal of downscaling of GOES image data to half-hourly 1-km LSTs by fusing it with MODIS data products and Shuttle Radar Topography Mission (SRTM) digital elevation data. The result of downscaling suggests that the proposed method successfully disaggregated GOES images to half-hourly 1-km LSTs with accuracy of approximately 2.5 K when validated against with MODIS LSTs at the same over-passing time. The synthetic LST datasets were further explored for monitoring of surface urban heat island (UHI) in the Los Angeles region by extracting key diurnal temperature cycle (DTC) parameters. It is found that the datasets and DTC derived parameters were more suitable for monitoring of daytime- other than nighttime-UHI. With the downscaled GOES 1-km LSTs, the diurnal temperature variations can well be characterized. An accuracy of about 2.5 K was achieved in terms of the fitted results at both 1 km and 5 km resolutions.

Diurnal Lightning Distributions as Observed by the Optical Transient Detector (OTD) and the Lightning Imaging Sensor (LIS)

NASA Technical Reports Server (NTRS)

Bailey, Jeff C.; Blakeslee, Richard J.; Buechler, Dennis E.; Christian, Hugh J.

2007-01-01

Data obtained from the Optical Transient Detector (April 1995 to March 2000) and the Lightning Imaging Sensor (December 1997 to December 2005) satellites (70 and 35 inclination low earth orbits, respectively) are used to statistically determine the number of flashes in the annual and seasonal diurnal cycle as a function of local and universal time. The data are further subdivided by season, land versus ocean, northern versus southern hemisphere, and other spatial (e.g., continents) and temporal (e.g., time of peak diurnal amplitude) categories. The data include corrections for detection efficiency and instrument view time. Continental results display strong diurnal variation, with a lightning peak in the late afternoon and a minimum in late morning. In regions of the world dominated by large mesoscale convective systems the peak in the diurnal curve shifts toward late evening or early morning hours. The maximum diurnal flash rate occurs in June-August, corresponding to the Northern Hemisphere summer, while the minimum occurs in December-February. Summer lightning dominates over winter activity and springtime lightning dominates over autumn activity at most continental locations. This latter behavior occurs especially strongly over the Amazon region in South America in September-November. Oceanic lightning activity in winter and autumn tends to exceed that in summer and spring. Global lightning is well correlated in phase but not in amplitude with the Carnegie curve. The diurnal flash rate varies about 4-35 percent about the mean, while the Carnegie curve varies around 4-15 percent.

Setting the main circadian clock of a diurnal mammal by hypocaloric feeding

PubMed Central

Mendoza, Jorge; Gourmelen, Sylviane; Dumont, Stephanie; Sage-Ciocca, Dominique; Pévet, Paul; Challet, Etienne

2012-01-01

Caloric restriction attenuates the onset of a number of pathologies related to ageing. In mammals, circadian rhythms, controlled by the hypothalamic suprachiasmatic (SCN) clock, are altered with ageing. Although light is the main synchronizer for the clock, a daily hypocaloric feeding (HF) may also modulate the SCN activity in nocturnal rodents. Here we report that a HF also affects behavioural, physiological and molecular circadian rhythms of the diurnal rodent Arvicanthis ansorgei. Under constant darkness HF, but not normocaloric feeding (NF), entrains circadian behaviour. Under a light–dark cycle, HF at midnight led to phase delays of the rhythms of locomotor activity and plasma corticosterone. Furthermore, Per2 and vasopressin gene oscillations in the SCN were phase delayed in HF Arvicanthis compared with animals fed ad libitum. Moreover, light-induced expression of Per genes in the SCN was modified in HF Arvicanthis, despite a non-significant effect on light-induced behavioural phase delays. Together, our data show that HF affects the circadian system of the diurnal rodent Arvicanthis ansorgei differentially from nocturnal rodents. The Arvicanthis model has relevance for the potential use of HF to manipulate circadian rhythms in diurnal species including humans. PMID:22570380

Exploring diurnal and seasonal characteristics of global carbon cycle with GISS Model E2 GCM

NASA Astrophysics Data System (ADS)

Aleinov, I. D.; Kiang, N. Y.; Romanou, A.

2017-12-01

The ability to properly model surface carbon fluxes on the diurnal and seasonal time scale is a necessary requirement for understanding of the global carbon cycle. It is also one of the most challenging tasks faced by modern General Circulation Models (GCMs) due to complexity of the algorithms and variety of relevant spatial and temporal scales. The observational data, though abundant, is difficult to interpret at the global scale, because flux tower observations are very sparse for large impact areas (such as Amazon and African rainforest and most of Siberia) and satellite missions often struggle to produce sufficiently high confidence data over the land and may be missing CO2 amounts near the surface due to the nature of the method. In this work we use the GISS Model E2 GCM to perform a subset of experiments proposed by the Coupled Climate-Carbon Cycle Model Intercomparison Project (C4MIP) and relate the results to available observations.The GISS Model E2 GCM is currently equipped with a complete global carbon cycle algorithm. Its surface carbon fluxes are computed by the Ent Terrestrial Biosphere Model (Ent TBM) over the land with observed leaf area index of the Moderate Resolution Imaging Spectrometer (MODIS) and by the NASA Ocean Biogeochemistry Model (NOBM) over the ocean. The propagation of atmospheric CO2 is performed by a generic Model E2 tracer algorithm, which is based on a quadratic upstream method (Prather 1986). We perform a series spin-up experiments for preindustrial climate conditions and fixed preindustrial atmospheric CO2 concentration. First, we perform separate spin-up simulations each for terrestrial and ocean carbon. We then combine the spun-up states and perform a coupled spin-up simulation until the model reaches a sufficient equilibrium. We then release restrictions on CO2 concentration and allow it evolve freely, driven only by simulated surface fluxes. We then study the results of the unforced run, comparing the amplitude and the phase

Diurnal variations in water vapor over Central and South America

NASA Astrophysics Data System (ADS)

Meza, Amalia; Mendoza, Luciano; Clara, Bianchi

2017-04-01

Diurnal variations in atmospheric integrated water vapor (IWV) are studied employing IWV estimates, with a 30 minutes sampling rate, derived from Global Navigation Satellite Systems (GNSS) observations during the period 2007-2013. The analysis was performed in 70 GNSS tracking sites (GPS + GLONASS) belonging to Central and South America, which have more than 5 years of data. The selected area involves different climate types, from polar to tropical, and diverse relieves, therefore the patterns of IWV diurnal variations are very different for each station. There are many processes that could induce diurnal variations in atmospheric water vapor (Dai et al, 1999 a,b), the most relevant causes are: surface evapotranspiration, atmospheric large-scale vertical motion, atmospheric low-level moisture convergence and precipitation and vertical mixing (which affects the vertical distribution of water vapor but does not affect the IWV). Firstly, our work study the main characteristics of the IWV diurnal cycle (and for surface temperature, T) obtained for all stations together, using Principal Component Analysis (PCA). First and second PCA modes highlight the global main behaviors of IWV variability for all stations. The first mode on IWV represent the 70% of the variability and could be related to the surface evapotranspiration, while the second mode (27 % of the variability) is practically in counter phase to T variability (its first mode represent the 97% of the variability), therefore this mode could be related to breeze regime. Then, every station is separately analyzed and seasonal and local variations (relative to the relives) are detected, these results spotlight, among other characteristics, the sea and mountain breeze regime. This presentation shows the first analysis of IWV diurnal cycle performed over Central and South America and another original characteristic is PCA technique employed to infer the results. Reference: Dai, A., K. E. Trenberth, and T. R. Karl

The diurnal cycle of clouds and precipitation at the ARM SGP site: Cloud radar observations and simulations from the multiscale modeling framework

DOE PAGES

Zhao, Wei; Marchand, Roger; Fu, Qiang

2017-07-08

Millimeter Wavelength Cloud Radar (MMCR) data from December 1996 to December 2010, collected at the U.S. Department of Energy Atmospheric Radiation Measurement (ARM) program Southern Great Plains (SGP) site, are used to examine the diurnal cycle of hydrometeor occurrence. These data are categorized into clouds (-40 dBZ e ≤ reflectivity < -10 dBZ e), drizzle and light precipitation (-10 dBZ e ≤ reflectivity < 10 dBZ e), and heavy precipitation (reflectivity ≥ 10 dBZ e). The same criteria are implemented for the observation-equivalent reflectivity calculated by feeding outputs from a Multiscale Modeling Framework (MMF) climate model into a radar simulator.more » The MMF model consists of the National Center for Atmospheric Research Community Atmosphere Model with conventional cloud parameterizations replaced by a cloud-resolving model. We find that a radar simulator combined with the simple reflectivity categories can be an effective approach for evaluating diurnal variations in model hydrometeor occurrence. It is shown that the MMF only marginally captures observed increases in the occurrence of boundary layer clouds after sunrise in spring and autumn and does not capture diurnal changes in boundary layer clouds during the summer. Above the boundary layer, the MMF captures reasonably well diurnal variations in the vertical structure of clouds and light and heavy precipitation in the summer but not in the spring.« less

Trait Positive and Negative Emotionality Differentially Associate with Diurnal Cortisol Activity

PubMed Central

Miller, Karissa G.; Wright, Aidan G.C.; Peterson, Laurel M.; Kamarck, Thomas W.; Anderson, Barbara A.; Kirschbaum, Clemens; Marsland, Anna L.; Muldoon, Matthew F.; Manuck, Stephen B.

2016-01-01

Summary Inter-individual variability in metrics of hypothalamic-pituitary-adrenocortical (HPA) activity, such as the slope of the diurnal decline in cortisol, cortisol awakening response (CAR), and total cortisol output, have been found to associate inversely with trait ratings of extraversion and positive affect (E/PA) and positively with neuroticism and negative affect (N/NA) in some, but not all, investigations. These inconsistencies may partly reflect varied intensity of cortisol sampling among studies and reliance on self-rated traits, which are subject to reporting biases and limitations of introspection. Here, we further examined dispositional correlates of HPA activity in 490 healthy, employed midlife volunteers (M age= 43 years; 54% Female; 86% white). Trait ratings were requested from participants and 2 participant-elected informants using the Positive and Negative Affect Schedule (PANAS) and Extraversion and Neuroticism dimensions of NEO personality inventories. CAR was assessed as percent increase in cortisol levels from awakening to 30 minutes after awakening; and the diurnal slope and total output of cortisol [Area Under the Curve (AUC)] were determined from cortisol measurements taken at awakening, +4 and +9 hours later, and bedtime, across 3 workdays. Structural equation modeling was used to estimate multi-informant E/PA and N/NA factors. We used 3 days of measurement as indicators to model each of the three latent cortisol factors (slope, CAR, and AUC). With the two latent emotionality and three latent cortisol indices included there was good fit to the data (χ2(200)= 278.38, p= .0002; RMSEA= .028, 90% CI= .02–.04; CFI/TLI= .97/.96; SRMR= .04). After controlling for covariates (age, sex, race), results showed higher latent E/PA associated with a steeper diurnal slope (Standardized β= −.19, p= .02) and smaller CAR (Standardized β= −.26, p= .004), whereas N/NA did not associate with any cortisol metric (Standardized β’s= −.12 to .13, p�

Cold and hunger induce diurnality in a nocturnal mammal.

PubMed

van der Vinne, Vincent; Riede, Sjaak J; Gorter, Jenke A; Eijer, Willem G; Sellix, Michael T; Menaker, Michael; Daan, Serge; Pilorz, Violetta; Hut, Roelof A

2014-10-21

The mammalian circadian system synchronizes daily timing of activity and rest with the environmental light-dark cycle. Although the underlying molecular oscillatory mechanism is well studied, factors that influence phenotypic plasticity in daily activity patterns (temporal niche switching, chronotype) are presently unknown. Molecular evidence suggests that metabolism may influence the circadian molecular clock, but evidence at the level of the organism is lacking. Here we show that a metabolic challenge by cold and hunger induces diurnality in otherwise nocturnal mice. Lowering ambient temperature changes the phase of circadian light-dark entrainment in mice by increasing daytime and decreasing nighttime activity. This effect is further enhanced by simulated food shortage, which identifies metabolic balance as the underlying common factor influencing circadian organization. Clock gene expression analysis shows that the underlying neuronal mechanism is downstream from or parallel to the main circadian pacemaker (the hypothalamic suprachiasmatic nucleus) and that the behavioral phenotype is accompanied by phase adjustment of peripheral tissues. These findings indicate that nocturnal mammals can display considerable plasticity in circadian organization and may adopt a diurnal phenotype when energetically challenged. Our previously defined circadian thermoenergetics hypothesis proposes that such circadian plasticity, which naturally occurs in nocturnal mammals, reflects adaptive maintenance of energy balance. Quantification of energy expenditure shows that diurnality under natural conditions reduces thermoregulatory costs in small burrowing mammals like mice. Metabolic feedback on circadian organization thus provides functional benefits by reducing energy expenditure. Our findings may help to clarify relationships between sleep-wake patterns and metabolic phenotypes in humans.

The Impact of the Afternoon Planetary Boundary-Layer Height on the Diurnal Cycle of CO and CO2 Mixing Ratios at a Low-Altitude Mountaintop

NASA Astrophysics Data System (ADS)

Lee, Temple R.; De Wekker, Stephan F. J.; Pal, Sandip

2018-02-01

Mountaintop trace-gas mixing ratios are often assumed to represent free atmospheric values, but are affected by valley planetary boundary-layer (PBL) air at certain times. We hypothesize that the afternoon valley-PBL height relative to the ridgetop is important in the diurnal cycle of mountaintop trace-gas mixing ratios. To investigate this, we use, (1) 4-years (1 January 2009-31 December 2012) of CO and CO2 mixing-ratio measurements and supporting meteorological observations from Pinnacles (38.61°N , 78.35°W , 1017 m a.s.l.), which is a monitoring site in the Appalachian Mountains, (2) regional O3 mixing-ratio measurements, and (3) PBL heights determined from a nearby sounding station. Results reveal that the amplitudes of the diurnal cycles of CO and CO2 mixing ratios vary as a function of the daytime maximum valley-PBL height relative to the ridgetop. The mean diurnal cycle for the subset of days when the afternoon valley-PBL height is at least 400 m below the ridgetop shows a daytime CO mixing-ratio increase, implying the transport of PBL air from the valley to the mountaintop. During the daytime, on days when the PBL heights exceed the mountaintop, PBL dilution and entrainment cause CO mixing ratios to decrease. This decrease in CO mixing ratio, especially on days when PBL heights are at least 400 m above the ridgetop, suggests that measurements from these days can be used as with afternoon measurements from flat terrain in applications requiring regionally-representative measurements.

Memory performance is related to the cortisol awakening response in older people, but not to the diurnal cortisol slope.

PubMed

Hidalgo, Vanesa; Almela, Mercedes; Pulopulos, Matias M; Salvador, Alicia

2016-09-01

There are large individual differences in age-related cognitive decline. Hypothalamic-pituitary-adrenal axis (HPA-axis) functioning has been suggested as one of the mechanisms underlying these differences. This study aimed to investigate the relationships between the diurnal cortisol cycle, measured as the cortisol awakening response (CAR), and the diurnal cortisol slope (DCS) and the memory performance of healthy older people. To do so, we assessed the verbal, visual, and working memory performance of 64 participants (32 men) from 57 to 76 years old who also provided 14 saliva samples on two consecutive weekdays to determine their diurnal cortisol cycle. The CAR was linearly and negatively associated with verbal (significantly) and visual (marginally) memory domains, but not with working memory. Sex did not moderate these relationships. Furthermore, no associations were found between the DCS and any of the three memory domains assessed. Our results indicate that the two components of the diurnal cortisol cycle have different relationships with memory performance, with the CAR being more relevant than DCS in understanding the link from HPA-axis activity and regulation to different types of memory. These results suggest that the CAR is related to memory domains dependent on hippocampal functioning (i.e., declarative memory), but not to those that are more dependent on prefrontal cortex functioning (i.e., working memory). Copyright © 2016 Elsevier Ltd. All rights reserved.

Bipolar mood cycles and lunar tidal cycles.

PubMed

Wehr, T A

2018-04-01

In 17 patients with rapid cycling bipolar disorder, time-series analyses detected synchronies between mood cycles and three lunar cycles that modulate the amplitude of the moon's semi-diurnal gravimetric tides: the 14.8-day spring-neap cycle, the 13.7-day declination cycle and the 206-day cycle of perigee-syzygies ('supermoons'). The analyses also revealed shifts among 1:2, 1:3, 2:3 and other modes of coupling of mood cycles to the two bi-weekly lunar cycles. These shifts appear to be responses to the conflicting demands of the mood cycles' being entrained simultaneously to two different bi-weekly lunar cycles with slightly different periods. Measurements of circadian rhythms in body temperature suggest a biological mechanism through which transits of one of the moon's semi-diurnal gravimetric tides might have driven the patients' bipolar cycles, by periodically entraining the circadian pacemaker to its 24.84-h rhythm and altering the pacemaker's phase-relationship to sleep in a manner that is known to cause switches from depression to mania.

Diurnal characteristics of surface level O3 and other important trace gases in New England

NASA Astrophysics Data System (ADS)

Talbot, Robert; Mao, Huiting; Sive, Barkley

2005-05-01

Data obtained from spring 2001 to summer 2003 in New England by the Atmospheric Investigation, Regional Modeling, Analysis and Prediction (AIRMAP) program were used to document the diurnal characteristics of O3, CO2, NO, and during selected intervals hydrocarbon and oxygenated species. The diurnal cycles of O3 and oxygenated species showed a monotonic rise in mixing ratio following sunrise (replenishment) that was mirrored by nighttime removal (depletion) under the nocturnal inversion. The median depletion rate of O3 was 4.9 ppbv h-1 compared to a replenishment rate of 6.2 ppbv h-1. The significant and rapid loss of O3 at night combined with an anthropogenic hydrocarbon signature dominated by a vehicular source led us to the hypothesis that nocturnal O3 depletion represented the combined effects of dry deposition and titration by NO released from mobile sources. Nighttime removal of O3 averaged 31 ppbv (median of 27 ppbv), with ˜11 ppbv due to dry deposition and ˜20 ppbv loss by titration with NO and NO2. The seasonally averaged diurnal cycles of O3 and NO were very similar from year to year, indicating that although there was large variability in the daily levels of these species, their sources/sinks were quite consistent. Moreover, CO2 and selected hydrocarbons exhibited a diurnal cycle opposite to that of O3, with the highest mixing ratios occurring at night. The diurnal cycles of oxygenated compounds such as methanol, acetaldehyde, methyl ethyl ketone, acetone + propanal, methyl vinyl ketone + methacrolein were investigated for a 2 day time period in July 2003. Our data are among the first to illustrate the diurnal cycle of these compounds. We used these species to demonstrate the importance of vertical mixing in driving the diurnal cycle of ground level O3 in New England. Day/night ratios ranged from 2.3 for acetone + propanal to 11 for methyl vinyl ketone + methacrolein. Deposition velocities of 0.5-1 m s-1 were estimated for these species, which are

Mechanisms for Diurnal Variability of Global Tropical Rainfall Observed from TRMM

NASA Technical Reports Server (NTRS)

Yang, Song; Smith, Eric A.

2004-01-01

The behavior and various controls of diurnal variability in tropical-subtropical rainfall are investigated using Tropical Rainfall Measuring Mission (TRMM) precipitation measurements retrieved from: (1) TRMM Microwave Imager (TMI), (2) Precipitation Radar (PR), and (3) TMI/PR Combined, standard level 2 algorithms for the 1998 annual cycle. Results show that the diurnal variability characteristics of precipitation are consistent for all three algorithms, providing assurance that TRMM retrievals are providing consistent estimates of rainfall variability. As anticipated, most ocean areas exhibit more rainfall at night, while over most land areas rainfall peaks during daytime ,however, various important exceptions are found. The dominant feature of the oceanic diurnal cycle is a rainfall maximum in late-evening/early-morning (LE-EM) hours, while over land the dominant maximum occurs in the mid- to late-afternoon (MLA). In conjunction with these maxima are pronounced seasonal variations of the diurnal amplitudes. Amplitude analysis shows that the diurnal pattern and its seasonal evolution are closely related to the rainfall accumulation pattern and its seasonal evolution. In addition, the horizontal distribution of diurnal variability indicates that for oceanic rainfall there is a secondary MLA maximum, co-existing with the LE-EM maximum, at latitudes dominated by large scale convergence and deep convection. Analogously, there is a preponderance for an LE-EM maximum over land, co-existing with the stronger MLA maximum, although it is not evident that this secondary continental feature is closely associated with the large scale circulation. The ocean results clearly indicate that rainfall diurnal variability associated with large scale convection is an integral part of the atmospheric general circulation.

How well do satellite observations and models capture diurnal variation in aerosols over the Korean Peninsula?

NASA Astrophysics Data System (ADS)

Hyer, E. J.; Xian, P.; Campbell, J. R.

2016-12-01

Aerosol sources, sinks, and transport processes have important variations over the diurnal cycle. Advances in geostationary satellite observation have made it possible to retrieve aerosol properties over a larger fraction of the diurnal cycle in many areas. However, the conditions for retrieval of aerosol from space also have systematic diurnal variation, which must be considered when interpreting satellite data. We used surface PM2.5 observations from the Korean National Institute for Environmental Research, together with the dense network of AERONET sun photometers deployed in Korea for the KORUS-AQ mission in spring 2016, to examine diurnal variations in aerosol conditions and quantify the effect of systematic diurnal processes on daily integrated aerosol quantities of forcing and PM2.5 24-hour exposure. Time-resolved observations of aerosols from in situ data were compared to polar and geostationary satellite observations to evaluate these questions: 1) How well is diurnal variation observed in situ captured by satellite products? 2) Do the satellite products show evidence of systematic biases related to diurnally varying observing conditions? 3) What is the implication of diurnal variation for aerosol forcing estimates based on observations near solar noon? The diurnal variation diagnosed from observations was also compared to the output of the Navy Aerosol Analysis and Prediction System (NAAPS), to examine the ability of this model to capture aerosol diurnal variation. Finally, we discuss the implications of the observed diurnal variation for assimilation of aerosol observations into forecast models.

Bipolar mood cycles and lunar tidal cycles

PubMed Central

Wehr, T A

2018-01-01

In 17 patients with rapid cycling bipolar disorder, time-series analyses detected synchronies between mood cycles and three lunar cycles that modulate the amplitude of the moon’s semi-diurnal gravimetric tides: the 14.8-day spring–neap cycle, the 13.7-day declination cycle and the 206-day cycle of perigee-syzygies (‘supermoons’). The analyses also revealed shifts among 1:2, 1:3, 2:3 and other modes of coupling of mood cycles to the two bi-weekly lunar cycles. These shifts appear to be responses to the conflicting demands of the mood cycles’ being entrained simultaneously to two different bi-weekly lunar cycles with slightly different periods. Measurements of circadian rhythms in body temperature suggest a biological mechanism through which transits of one of the moon’s semi-diurnal gravimetric tides might have driven the patients’ bipolar cycles, by periodically entraining the circadian pacemaker to its 24.84-h rhythm and altering the pacemaker’s phase-relationship to sleep in a manner that is known to cause switches from depression to mania. PMID:28115741

Estimating Sea Surface Temperature Measurement Methods Using Characteristic Differences in the Diurnal Cycle

NASA Astrophysics Data System (ADS)

Carella, G.; Kennedy, J. J.; Berry, D. I.; Hirahara, S.; Merchant, C. J.; Morak-Bozzo, S.; Kent, E. C.

2018-01-01

Lack of reliable observational metadata represents a key barrier to understanding sea surface temperature (SST) measurement biases, a large contributor to uncertainty in the global surface record. We present a method to identify SST measurement practice by comparing the observed SST diurnal cycle from individual ships with a reference from drifting buoys under similar conditions of wind and solar radiation. Compared to existing estimates, we found a larger number of engine room-intake (ERI) reports post-World War II and in the period 1960-1980. Differences in the inferred mixture of observations lead to a systematic warmer shift of the bias adjusted SST anomalies from 1980 compared to previous estimates, while reducing the ensemble spread. Changes in mean field differences between bucket and ERI SST anomalies in the Northern Hemisphere over the period 1955-1995 could be as large as 0.5°C and are not well reproduced by current bias adjustment models.

The pulse of a montane ecosystem: coupled diurnal cycles in solar flux, snowmelt, evapotranspiration, groundwater, and streamflow at Sagehen Creek (Sierra Nevada, California)

NASA Astrophysics Data System (ADS)

Kirchner, James

2016-04-01

Forested catchments in the subalpine snow zone provide interesting opportunities to study the interplay between energy and water fluxes under seasonally variable degrees of forcing by transpiration and snowmelt. In such catchments, diurnal cycles in solar flux drive snowmelt and evapotranspiration, which in turn lead to diurnal cycles (with opposing phases) in groundwater levels. These in turn are linked to diurnal cycles in stream stage and discharge, which potentially provide a spatially integrated measure of snowmelt and evapotranspiration rates in the surrounding landscape. Here I analyze ecohydrological controls on diurnal stream and groundwater fluctuations induced by snowmelt and evapotranspiration (ET) at Sagehen Creek, in the Sierra Nevada mountains of California. There is a clear 6-hour lag between radiation forcing and the stream or groundwater response. This is not a travel-time delay, but instead a 90-degree dynamical phase lag arising from the integro-differential relationship between groundwater storage and recharge, ET, and streamflow. The time derivative of groundwater levels is strongly positively correlated with solar flux during snowmelt periods, reflecting snowmelt recharge to the riparian aquifer during daytime. Conversely, this derivative is strongly negatively correlated with solar flux during snow-free summer months, reflecting transpiration withdrawals from the riparian aquifer. As the snow cover disappears, the correlation between the solar flux and the time derivative of groundwater levels abruptly shifts from positive (snowmelt dominance) to negative (ET dominance). During this transition, the groundwater cycles briefly vanish when the opposing forcings (snowmelt and ET) are of equal magnitude, and thus cancel each other out. Stream stage fluctuations integrate these relationships over the altitude range of the catchment. Rates of rise and fall in stream stage are positively correlated with solar flux when the whole catchment is snow

Levels of Arabidopsis thaliana Leaf Phosphatidic Acids, Phosphatidylserines, and Most Trienoate-Containing Polar Lipid Molecular Species Increase during the Dark Period of the Diurnal Cycle.

PubMed

Maatta, Sara; Scheu, Brad; Roth, Mary R; Tamura, Pamela; Li, Maoyin; Williams, Todd D; Wang, Xuemin; Welti, Ruth

2012-01-01

Previous work has demonstrated that plant leaf polar lipid fatty acid composition varies during the diurnal (dark-light) cycle. Fatty acid synthesis occurs primarily during the light, but fatty acid desaturation continues in the absence of light, resulting in polyunsaturated fatty acids reaching their highest levels toward the end of the dark period. In this work, Arabidopsis thaliana were grown at constant (21°C) temperature with 12-h light and 12-h dark periods. Collision induced dissociation time-of-flight mass spectrometry (MS) demonstrated that 16:3 and 18:3 fatty acid content in membrane lipids of leaves are higher at the end of the dark than at the end of the light period, while 16:1, 16:2, 18:0, and 18:1 content are higher at the end of the light period. Lipid profiling of membrane galactolipids, phospholipids, and lysophospholipids by electrospray ionization triple quadrupole MS indicated that the monogalactosyldiacylglycerol, phosphatidylglycerol, and phosphatidylcholine classes include molecular species whose levels are highest at end of the light period and others that are highest at the end of the dark period. The levels of phosphatidic acid (PA) and phosphatidylserine classes were higher at the end of the dark period, and molecular species within these classes either followed the class pattern or were not significantly changed in the diurnal cycle. Phospholipase D (PLD) is a family of enzymes that hydrolyzes phospholipids to produce PA. Analysis of several PLD mutant lines suggests that PLDζ2 and possibly PLDα1 may contribute to diurnal cycling of PA. The polar lipid compositional changes are considered in relation to recent data that demonstrate phosphatidylcholine acyl editing.

Comparative Analysis of Vertebrate Diurnal/Circadian Transcriptomes

PubMed Central

Boyle, Greg; Richter, Kerstin; Priest, Henry D.; Traver, David; Mockler, Todd C.; Chang, Jeffrey T.; Kay, Steve A.

2017-01-01

From photosynthetic bacteria to mammals, the circadian clock evolved to track diurnal rhythms and enable organisms to anticipate daily recurring changes such as temperature and light. It orchestrates a broad spectrum of physiology such as the sleep/wake and eating/fasting cycles. While we have made tremendous advances in our understanding of the molecular details of the circadian clock mechanism and how it is synchronized with the environment, we still have rudimentary knowledge regarding its connection to help regulate diurnal physiology. One potential reason is the sheer size of the output network. Diurnal/circadian transcriptomic studies are reporting that around 10% of the expressed genome is rhythmically controlled. Zebrafish is an important model system for the study of the core circadian mechanism in vertebrate. As Zebrafish share more than 70% of its genes with human, it could also be an additional model in addition to rodent for exploring the diurnal/circadian output with potential for translational relevance. Here we performed comparative diurnal/circadian transcriptome analysis with established mouse liver and other tissue datasets. First, by combining liver tissue sampling in a 48h time series, transcription profiling using oligonucleotide arrays and bioinformatics analysis, we profiled rhythmic transcripts and identified 2609 rhythmic genes. The comparative analysis revealed interesting features of the output network regarding number of rhythmic genes, proportion of tissue specific genes and the extent of transcription factor family expression. Undoubtedly, the Zebrafish model system will help identify new vertebrate outputs and their regulators and provides leads for further characterization of the diurnal cis-regulatory network. PMID:28076377

Sleep Deprivation and Caffeine Treatment Potentiate Photic Resetting of the Master Circadian Clock in a Diurnal Rodent.

PubMed

Jha, Pawan Kumar; Bouâouda, Hanan; Gourmelen, Sylviane; Dumont, Stephanie; Fuchs, Fanny; Goumon, Yannick; Bourgin, Patrice; Kalsbeek, Andries; Challet, Etienne

2017-04-19

Circadian rhythms in nocturnal and diurnal mammals are primarily synchronized to local time by the light/dark cycle. However, nonphotic factors, such as behavioral arousal and metabolic cues, can also phase shift the master clock in the suprachiasmatic nuclei (SCNs) and/or reduce the synchronizing effects of light in nocturnal rodents. In diurnal rodents, the role of arousal or insufficient sleep in these functions is still poorly understood. In the present study, diurnal Sudanian grass rats, Arvicanthis ansorgei , were aroused at night by sleep deprivation (gentle handling) or caffeine treatment that both prevented sleep. Phase shifts of locomotor activity were analyzed in grass rats transferred from a light/dark cycle to constant darkness and aroused in early night or late night. Early night, but not late night, sleep deprivation induced a significant phase shift. Caffeine on its own induced no phase shifts. Both sleep deprivation and caffeine treatment potentiated light-induced phase delays and phase advances in response to a 30 min light pulse, respectively. Sleep deprivation in early night, but not late night, potentiated light-induced c-Fos expression in the ventral SCN. Caffeine treatment in midnight triggered c-Fos expression in dorsal SCN. Both sleep deprivation and caffeine treatment potentiated light-induced c-Fos expression in calbindin-containing cells of the ventral SCN in early and late night. These findings indicate that, in contrast to nocturnal rodents, behavioral arousal induced either by sleep deprivation or caffeine during the sleeping period potentiates light resetting of the master circadian clock in diurnal rodents, and activation of calbindin-containing suprachiasmatic cells may be involved in this effect. SIGNIFICANCE STATEMENT Arousing stimuli have the ability to regulate circadian rhythms in mammals. Behavioral arousal in the sleeping period phase shifts the master clock in the suprachiasmatic nuclei and/or slows down the photic

Effects of photophase illuminance on locomotor activity, urine production and urinary 6-sulfatoxymelatonin in nocturnal and diurnal South African rodents.

PubMed

van der Merwe, Ingrid; Oosthuizen, Maria K; Ganswindt, Andre; Haim, Abraham; Bennett, Nigel C

2017-05-01

Effects of photophase illuminance (1, 10, 100 and 330 lx of white incandescent lighting) on daily rhythms of locomotor activity, urine production and 6-sulfatoxymelatonin (6-SMT; 10 versus 330 lx) were studied in nocturnal Namaqua rock mice ( Micaelamys namaquensis ) and diurnal four-striped field mice ( Rhabdomys pumilio ). Micaelamys namaquensis was consistently nocturnal (∼90-94% nocturnal activity), whereas considerable individual variation marked activity profiles in R. pumilio , but with activity mostly pronounced around twilight (∼55-66% diurnal activity). The amplitude of daily activity was distinctly affected by light intensity and this effect was greater in M. namaquensis than in R. pumilio Only M. namaquensis displayed a distinctive daily rhythm of urine production, which correlated with its activity rhythm. Mean daily urine production appeared to be attenuated under dim photophase conditions, particularly in R. pumilio The results suggest that the circadian regulation of locomotor activity and urine production possesses separate sensitivity thresholds to photophase illuminance. Micaelamys namaquensis expressed a significant daily 6-SMT rhythm that peaked during the late night, but the rhythm was attenuated by the brighter photophase cycle (330 lx). Rhabdomys pumilio appeared to express an ultradian 6-SMT rhythm under both lighting regimes with comparable mean daily 6-SMT values, but with different temporal patterns. It is widely known that a natural dark phase which is undisturbed by artificial light is essential for optimal circadian function. Here, we show that light intensity during the photophase also plays a key role in maintaining circadian rhythms in rodents, irrespective of their temporal activity rhythm. © 2017. Published by The Company of Biologists Ltd.

Trait positive and negative emotionality differentially associate with diurnal cortisol activity.

PubMed

Miller, Karissa G; Wright, Aidan G C; Peterson, Laurel M; Kamarck, Thomas W; Anderson, Barbara A; Kirschbaum, Clemens; Marsland, Anna L; Muldoon, Matthew F; Manuck, Stephen B

2016-06-01

Inter-individual variability in metrics of hypothalamic-pituitary-adrenocortical (HPA) activity, such as the slope of the diurnal decline in cortisol, cortisol awakening response (CAR), and total cortisol output, have been found to associate inversely with trait ratings of extraversion and positive affect (E/PA) and positively with neuroticism and negative affect (N/NA) in some, but not all, investigations. These inconsistencies may partly reflect varied intensity of cortisol sampling among studies and reliance on self-rated traits, which are subject to reporting biases and limitations of introspection. Here, we further examined dispositional correlates of HPA activity in 490 healthy, employed midlife volunteers (M age=43 years; 54% Female; 86% white). Trait ratings were requested from participants and 2 participant-elected informants using the Positive and Negative Affect Schedule (PANAS) and Extraversion and Neuroticism dimensions of NEO personality inventories. CAR was assessed as percent increase in cortisol levels from awakening to 30min after awakening; and the diurnal slope and total output of cortisol [Area Under the Curve (AUC)] were determined from cortisol measurements taken at awakening, +4 and +9h later, and bedtime, across 3 workdays. Structural equation modeling was used to estimate multi-informant E/PA and N/NA factors. We used 3days of measurement as indicators to model each of the three latent cortisol factors (slope, CAR, and AUC). With the two latent emotionality and three latent cortisol indices included there was good fit to the data (χ(2)(200)=278.38, p=0.0002; RMSEA=0.028, 90% CI=0.02-0.04; CFI/TLI=0.97/0.96; SRMR=0.04). After controlling for covariates (age, sex, race), results showed higher latent E/PA associated with a steeper diurnal slope (Standardized β=-0.19, p=0.02) and smaller CAR (Standardized β=-0.26, p=0.004), whereas N/NA did not associate with any cortisol metric (Standardized β's=-0.12 to 0.13, p's=0.10 to 0.53). These

Convective Cloud and Rainfall Processes Over the Maritime Continent: Simulation and Analysis of the Diurnal Cycle

NASA Astrophysics Data System (ADS)

Gianotti, Rebecca L.

The Maritime Continent experiences strong moist convection, which produces significant rainfall and drives large fluxes of heat and moisture to the upper troposphere. Despite the importance of these processes to global circulations, current predictions of climate change over this region are still highly uncertain, largely due to inadequate representation of the diurnally-varying processes related to convection. In this work, a coupled numerical model of the land-atmosphere system (RegCM3-IBIS) is used to investigate how more physically-realistic representations of these processes can be incorporated into large-scale climate models. In particular, this work improves simulations of convective-radiative feedbacks and the role of cumulus clouds in mediating the diurnal cycle of rainfall. Three key contributions are made to the development of RegCM3-IBIS. Two pieces of work relate directly to the formation and dissipation of convective clouds: a new representation of convective cloud cover, and a new parameterization of convective rainfall production. These formulations only contain parameters that can be directly quantified from observational data, are independent of model user choices such as domain size or resolution, and explicitly account for subgrid variability in cloud water content and nonlinearities in rainfall production. The third key piece of work introduces a new method for representation of cloud formation within the boundary layer. A comprehensive evaluation of the improved model was undertaken using a range of satellite-derived and ground-based datasets, including a new dataset from Singapore's Changi airport that documents diurnal variation of the local boundary layer height. The performance of RegCM3-IBIS with the new formulations is greatly improved across all evaluation metrics, including cloud cover, cloud liquid water, radiative fluxes and rainfall, indicating consistent improvement in physical realism throughout the simulation. This work

Effects of a Therapeutic Intervention for Foster Preschoolers on Diurnal Cortisol Activity

PubMed Central

Fisher, Philip A.; Stoolmiller, Mike; Gunnar, Megan R.; Burraston, Bert O.

2007-01-01

Atypical diurnal patterns of hypothalamic-pituitary-adrenal (HPA) axis activity have been observed samples of individuals following early life adversity. A characteristic pattern arising from disrupted caregiving is a low early morning cortisol level that changes little from morning to evening. Less well understood is the plasticity of the HPA axis in response to subsequent supportive caregiving environments. Monthly early morning and evening cortisol levels were assessed over 12 months in a sample of 3- to 6-year-old foster children enrolled in a randomized trial of a family-based therapeutic intervention (N = 117; intervention condition n = 57; regular foster care condition n = 60), and a community comparison group of same-aged, nonmaltreated children from low-income families (n = 60). Latent growth analyses revealed stable and typical diurnal (morning-to-evening) cortisol activity among community comparison children. Foster children in the intervention condition exhibited cortisol activity that became comparable to the comparison group children over the course of the study. In contrast, children in regular foster care condition exhibited increasingly flattened morning-to-evening cortisol activity over the course of the study. In sum, improvements in caregiving following early adversity appear to have the potential to reverse or prevent disruptions in HPA axis functioning. PMID:17656028

Diurnal Cycles of High Resolution Land Surface Temperatures (LSTs) Determined from UAV Platforms Across a Range of Surface Types

NASA Astrophysics Data System (ADS)

McCabe, M.; Rosas Aguilar, J.; Parkes, S. D.; Aragon, B.

2017-12-01

Observation of land surface temperature (LST) has many practical uses, from studying boundary layer dynamics and land-atmosphere coupling, to investigating surface properties such as soil moisture status, heat stress and surface heat fluxes. Typically, LST is observed via satellite based sensors such as LandSat or via point measurements using IR radiometers. These measurements provide either good spatial coverage and resolution or good temporal coverage. However, neither are able to provide the needed spatial and temporal resolution for many of the research applications described above. Technological developments in the use of Unmanned Aerial Vehicles (UAVs), together with small thermal frame cameras, has enabled a capacity to overcome this spatiotemporal constraint. Utilising UAV platforms to collect LST measurements across diurnal cycles provides an opportunity to study how meteorological and surface properties vary in both space and time. Here we describe the collection of LST data from a multi-rotor UAV across a study domain that is observed multiple times throughout the day. Flights over crops of Rhodes grass and alfalfa, along with a bare desert surface, were repeated with between 8 and 11 surveys covering the period from early morning to sunset. Analysis of the collected thermal imagery shows that the constructed LST maps illustrate a strong diurnal cycle consistent with expected trends, but with considerable spatial and temporal variability observed within and between the different domains. These results offer new insights into the dynamics of land surface behavior in both dry and wet soil conditions and at spatiotemporal scales that are unable to be replicated using traditional satellite platforms.

Ozone nighttime recovery in the marine boundary layer: Measurement and simulation of the ozone diurnal cycle at Reunion Island

NASA Astrophysics Data System (ADS)

Bremaud, P. J.; Taupin, F.; Thompson, A. M.; Chaumerliac, N.

1998-02-01

We describe the diurnal cycle of ozone in the marine boundary layer measured at Reunion Island (21°S, 55°E) in the western part of the Indian Ocean in August-September 1995. Results from a box chemistry model are compared with ozone measurements at Reunion Island. We focus on the peak-to-peak amplitude of ozone concentration, since our measurements show a variation of about 4 parts per billion by volume, which is close to the value obtained by Johnson et al. [1990] during the Soviet-American Gases and Aerosols (SAGA) 1987 Indian Ocean cruise. Different dynamical mechanisms are examined in order to reproduce such a variation. We conclude that the most important one is the exchange between the ozone-rich free troposphere and the ozone-poor boundary layer. This exchange is supposed to be more important during the night than during the day, allowing ozone nighttime recovery. This is the key point of the observed diurnal cycle, since daytime ozone photochemistry is well described by the model. Then we assume an entrainment velocity equal to 1 mm s-1 during the day and 14 mm s-1 during the night to closely match our measurements. Topography influences, together with clouds, are presumed to be responsible for this difference between nighttime and daytime entrainment velocities of free tropospheric air into the boundary layer at Reunion Island. Over the open ocean the difference of the turbulent flux of sensible heat between the day and the night explains the strong ozone nighttime recovery observed by us and by Johnson et al. [1990].

Atmospheric diurnal and semi-diurnal variations observed with GPS radio occultation soundings

NASA Astrophysics Data System (ADS)

Xie, F.; Wu, D. L.; Ao, C. O.; Mannucci, A. J.

2009-11-01

Diurnal and semi-diurnal variations, driven by solar forcing, are two fundamental modes in the Earth's weather and climate system. Radio occultation (RO) measurements from the six COSMIC satellites (Constellation Observing System for Meteorology Ionosphere and Climate) provide rather uniform global coverage with high vertical resolution, all-weather and diurnal sampling capability. This paper analyzes the diurnal and semi-diurnal variations of both temperature and refractivity from two-year (2007-2008) COSMIC RO measurements in the troposphere and stratosphere. The RO observations reveal both propagating and trapped vertical structures of diurnal and semi-diurnal variations, including transition regions near the tropopause where data with high vertical resolution are critical. In the tropics the diurnal amplitude in refractivity decreases with altitude from a local maximum in the planetary boundary layer and reaches the minimum around 14 km and then further increase amplitude in the stratosphere. The upward propagating component of the migrating diurnal tides in the tropics is clearly captured by the GPS RO measurements, which show a downward progression in phase from upper troposphere to the stratopause with a vertical wavelength of about 25 km. Below 500 hPa (~5.5 km), seasonal variations of the peak diurnal amplitude in the tropics follow the solor forcing change in latitude, while at 30 km the seasonal pattern reverses with the diurnal amplitude peaking at the opposite side of the equator relative to the solar forcing. Polar regions shows large diurnal variations in the stratosphere with strong seasonal variations and the cause(s) of these variations require further investigations.

Diurnal patterns of productivity of arbuscular mycorrhizal fungi revealed with the Soil Ecosystem Observatory.

PubMed

Hernandez, Rebecca R; Allen, Michael F

2013-10-01

Arbuscular mycorrhizal (AM) fungi are the most abundant plant symbiont and a major pathway of carbon sequestration in soils. However, their basic biology, including their activity throughout a 24-h day : night cycle, remains unknown. We employed the in situ Soil Ecosystem Observatory to quantify the rates of diurnal growth, dieback and net productivity of extra-radical AM fungi. AM fungal hyphae showed significantly different rates of growth and dieback over a period of 24 h and paralleled the circadian-driven photosynthetic oscillations observed in plants. The greatest rates (and incidences) of growth and dieback occurred between noon and 18:00 h. Growth and dieback events often occurred simultaneously and were tightly coupled with soil temperature and moisture, suggesting a rapid acclimation of the external phase of AM fungi to the immediate environment. Changes in the environmental conditions and variability of the mycorrhizosphere may alter the diurnal patterns of productivity of AM fungi, thereby modifying soil carbon sequestration, nutrient cycling and host plant success. © 2013 The Authors. New Phytologist © 2013 New Phytologist Trust.

Diurnal patterns of productivity of arbuscular mycorrhizal fungi revealed with the Soil Ecosystem Observatory

PubMed Central

Hernandez, Rebecca R; Allen, Michael F

2013-01-01

Arbuscular mycorrhizal (AM) fungi are the most abundant plant symbiont and a major pathway of carbon sequestration in soils. However, their basic biology, including their activity throughout a 24-h day : night cycle, remains unknown. We employed the in situ Soil Ecosystem Observatory to quantify the rates of diurnal growth, dieback and net productivity of extra-radical AM fungi. AM fungal hyphae showed significantly different rates of growth and dieback over a period of 24 h and paralleled the circadian-driven photosynthetic oscillations observed in plants. The greatest rates (and incidences) of growth and dieback occurred between noon and 18:00 h. Growth and dieback events often occurred simultaneously and were tightly coupled with soil temperature and moisture, suggesting a rapid acclimation of the external phase of AM fungi to the immediate environment. Changes in the environmental conditions and variability of the mycorrhizosphere may alter the diurnal patterns of productivity of AM fungi, thereby modifying soil carbon sequestration, nutrient cycling and host plant success. PMID:23844990

Diurnal and seasonal change in stem respiration of Larix principis-rupprechtii trees, northern China.

PubMed

Yang, Yan; Zhao, Miao; Xu, Xiangtao; Sun, Zhenzhong; Yin, Guodong; Piao, Shilong

2014-01-01

Stem respiration is a critical and uncertain component of ecosystem carbon cycle. Few studies reported diurnal change in stem respiration as well as its linkage with climate. In this study, we investigated the diurnal and seasonal change in stem respiration and its linkage with environmental factors, in larch plantations of northern China from 2010 to 2012. The stem respiration per unit surface area (RS) showed clear diurnal cycles, ranging from 1.65±0.10 to 2.69±0.15 µmol m(-2) s(-1), increased after 6∶00, peaked at 15∶00 and then decreased. Both stem temperature and air temperature show similar diurnal pattern, while the diurnal pattern of air relative humidity is just the opposite to Rs. Similar to the diurnal cycles, seasonal change in RS followed the pattern of stem temperature. RS increased from May (1.28±0.07 µmol m(-2) s(-1)) when the stem temperature was relatively low and peaked in July (3.02±0.10 µmol m(-2) s(-1)) when the stem temperature was also the highest. Further regression analyses show that RS exponentially increases with increasing temperature, and the Q10 of Rs at mid daytime (1.97±0.17 at 12∶00 and 1.96±0.10 at 15∶00) is significantly lower than that of mid nighttime (2.60±0.14 at 00∶00 and 2.71±0.25 at 03∶00) Q10. This result not only implies that Rs is more sensitive to night than day warming, but also highlights that temperature responses of Rs estimated by only daytime measurement can lead to underestimated stem respiration increase under global warming, especially considering that temperature increase is faster during nighttime.

Reproducibility of summertime diurnal precipitation over northern Eurasia simulated by CMIP5 climate models

NASA Astrophysics Data System (ADS)

Hirota, N.; Takayabu, Y. N.

2015-12-01

Reproducibility of diurnal precipitation over northern Eurasia simulated by CMIP5 climate models in their historical runs were evaluated, in comparison with station data (NCDC-9813) and satellite data (GSMaP-V5). We first calculated diurnal cycles by averaging precipitation at each local solar time (LST) in June-July-August during 1981-2000 over the continent of northern Eurasia (0-180E, 45-90N). Then we examined occurrence time of maximum precipitation and a contribution of diurnally varying precipitation to the total precipitation.The contribution of diurnal precipitation was about 21% in both NCDC-9813 and GSMaP-V5. The maximum precipitation occurred at 18LST in NCDC-9813 but 16LST in GSMaP-V5, indicating some uncertainties even in the observational datasets. The diurnal contribution of the CMIP5 models varied largely from 11% to 62%, and their timing of the precipitation maximum ranged from 11LST to 20LST. Interestingly, the contribution and the timing had strong negative correlation of -0.65. The models with larger diurnal precipitation showed precipitation maximum earlier around noon. Next, we compared sensitivity of precipitation to surface temperature and tropospheric humidity between 5 models with large diurnal precipitation (LDMs) and 5 models with small diurnal precipitation (SDMs). Precipitation in LDMs showed high sensitivity to surface temperature, indicating its close relationship with local instability. On the other hand, synoptic disturbances were more active in SDMs with a dominant role of the large scale condensation, and precipitation in SDMs was more related with tropospheric moisture. Therefore, the relative importance of the local instability and the synoptic disturbances was suggested to be an important factor in determining the contribution and timing of the diurnal precipitation. Acknowledgment: This study is supported by Green Network of Excellence (GRENE) Program by the Ministry of Education, Culture, Sports, Science and Technology

The circadian oscillator in Synechococcus elongatus controls metabolite partitioning during diurnal growth.

PubMed

Diamond, Spencer; Jun, Darae; Rubin, Benjamin E; Golden, Susan S

2015-04-14

Synechococcus elongatus PCC 7942 is a genetically tractable model cyanobacterium that has been engineered to produce industrially relevant biomolecules and is the best-studied model for a prokaryotic circadian clock. However, the organism is commonly grown in continuous light in the laboratory, and data on metabolic processes under diurnal conditions are lacking. Moreover, the influence of the circadian clock on diurnal metabolism has been investigated only briefly. Here, we demonstrate that the circadian oscillator influences rhythms of metabolism during diurnal growth, even though light-dark cycles can drive metabolic rhythms independently. Moreover, the phenotype associated with loss of the core oscillator protein, KaiC, is distinct from that caused by absence of the circadian output transcriptional regulator, RpaA (regulator of phycobilisome-associated A). Although RpaA activity is important for carbon degradation at night, KaiC is dispensable for those processes. Untargeted metabolomics analysis and glycogen kinetics suggest that functional KaiC is important for metabolite partitioning in the morning. Additionally, output from the oscillator functions to inhibit RpaA activity in the morning, and kaiC-null strains expressing a mutant KaiC phosphomimetic, KaiC-pST, in which the oscillator is locked in the most active output state, phenocopies a ΔrpaA strain. Inhibition of RpaA by the oscillator in the morning suppresses metabolic processes that normally are active at night, and kaiC-null strains show indications of oxidative pentose phosphate pathway activation as well as increased abundance of primary metabolites. Inhibitory clock output may serve to allow secondary metabolite biosynthesis in the morning, and some metabolites resulting from these processes may feed back to reinforce clock timing.

Influence of diurnal photosynthetic activity on the morphology, structure, and thermal properties of normal and waxy barley starch.

PubMed

Goldstein, Avi; Annor, George; Vamadevan, Varatharajan; Tetlow, Ian; Kirkensgaard, Jacob J K; Mortensen, Kell; Blennow, Andreas; Hebelstrup, Kim H; Bertoft, Eric

2017-05-01

This study investigated the influence of diurnal photosynthetic activity on the morphology, molecular composition, crystallinity, and gelatinization properties of normal barley starch (NBS) and waxy barley starch (WBS) granules from plants cultivated in a greenhouse under normal diurnal (16h light) or constant light photosynthetic conditions. Growth rings were observed in all starch samples regardless of lighting conditions. The size distribution of whole and debranched WBS analyzed by gel-permeation chromatography did not appear to be influenced by the different lighting regimes, however, a greater relative crystallinity measured by wide-angle X-ray scattering and greater crystalline quality as judged by differential scanning calorimetry was observed under the diurnal lighting regime. NBS cultivated under the diurnal photosynthetic lighting regime displayed lower amylose content (18.7%), and shorter amylose chains than its counterpart grown under constant light. Although the relative crystallinity of NBS was not influenced by lighting conditions, lower onset, peak, and completion gelatinization temperatures were observed in diurnally grown NBS compared to constant light conditions. It is concluded that normal barley starch is less influenced by the diurnal photosynthetic lighting regime than amylose-free barley starch suggesting a role of amylose to prevent structural disorder and increase starch granule robustness against environmental cues. Copyright © 2017 Elsevier B.V. All rights reserved.

Melatonin-induced CBF/DREB1s are essential for diurnal change of disease resistance and CCA1 expression in Arabidopsis.

PubMed

Shi, Haitao; Wei, Yunxie; He, Chaozu

2016-03-01

Melatonin (N-acetyl-5-methoxytryptamine) is an important regulator of circadian rhythms and immunity in animals. However, the diurnal changes of endogenous melatonin and melatonin-mediated diurnal change of downstream responses remain unclear in Arabidopsis. Using the publicly available microarray data, we found that the transcript levels of two melatonin synthesis genes (serotonin N-acetyltransferase (SNAT) and caffeate O-methyltransferase (COMT)) and endogenous melatonin level were regulated by diurnal cycles, with different magnitudes of change. Moreover, the transcripts of C-repeat-binding factors (CBFs)/Drought response element Binding 1 factors (DREB1s) were co-regulated by exogenous melatonin and diurnal changes, indicating the possible correlation among clock, endogenous melatonin level and AtCBFs expressions. Interestingly, diurnal change of plant immunity against Pst DC3000 and CIRCADIANCLOCK ASSOCIATED 1 (CCA1) expression were largely lost in AtCBFs knockdown line-amiR-1. Taken together, this study identifies the molecular pathway underlying the diurnal changes of immunity in Arabidopsis. Notably, the diurnal changes of endogenous melatonin may regulate corresponding changes of AtCBF/DREB1s expression and their underlying diurnal cycle of plant immunity and AtCCA1. Copyright © 2016 Elsevier Masson SAS. All rights reserved.

Hypothalamic-pituitary-adrenal (HPA) axis function in the California mouse (Peromyscus californicus): Changes in baseline activity, reactivity, and fecal excretion of glucocorticoids across the diurnal cycle

PubMed Central

Harris, Breanna N.; Saltzman, Wendy; de Jong, Trynke R.; Milnes, Matthew R.

2012-01-01

The California mouse, Peromyscus californicus, is an increasingly popular animal model in behavioral, neural, and endocrine studies, but little is known about its baseline hypothalamicpituitary-adrenal (HPA) axis activity or HPA responses to stressors. We characterized plasma corticosterone (CORT) concentrations in P. californicus under baseline conditions across the diurnal cycle, in response to pharmacological manipulation of the HPA axis, and in response to a variety of stressors at different times of day. In addition, we explored the use of fecal samples to monitor adrenocortical activity non-invasively. California mice have very high baseline levels of circulating CORT that change markedly over 24 hours, but that do not differ between the sexes. This species may be somewhat glucocorticoid-resistant in comparison to other rodents as a relatively high dose of dexamethasone (5 mg/kg, s.c.) was required to suppress plasma CORT for 8 h post-injection. CORT responses to stressors and ACTH injection differed with time of day, as CORT concentrations were elevated more readily during the morning (inactive period) than in the evening (active period) when compared to time-matched control. Data from 3H-CORT injection studies show that the time course for excretion of fecal CORT, or glucocorticoid metabolites, differs with time of injection. Mice injected in the evening excreted the majority of fecal radioactivity 2–4 h post-injection whereas mice injected during the morning did so at 14–16 h post-injection. Unfortunately, the antibody we used does not adequately bind the most prevalent fecal glucocorticoid metabolites and therefore we could not validate its use for fecal assays. PMID:23026495

Effect of diurnal photosynthetic activity on the fine structure of amylopectin from normal and waxy barley starch.

PubMed

Goldstein, Avi; Annor, George; Blennow, Andreas; Bertoft, Eric

2017-09-01

The impact of diurnal photosynthetic activity on the fine structure of the amylopectin fraction of starch synthesized by normal barley (NBS) and waxy barley (WBS), the latter completely devoid of amylose biosynthesis, was determined following the cultivation under normal diurnal or constant light growing conditions. The amylopectin fine structures were analysed by characterizing its unit chain length profiles after enzymatic debranching as well as its φ,β-limit dextrins and its clusters and building blocks after their partial and complete hydrolysis with α-amylase from Bacillus amyloliquefaciens, respectively. Regardless of lighting conditions, no structural effects were found when comparing both the amylopectin side-chain distribution and the internal chain fragments of these amylopectins. However, the diurnally grown NBS and WBS both showed larger amylopectin clusters and these had lower branching density and longer average chain lengths than clusters derived from plants grown under constant light conditions. Amylopectin clusters from diurnally grown plants also consisted of a greater number of building blocks, and shorter inter-block chain lengths compared to clusters derived from plants grown under constant light. Our data demonstrate that the diurnal light regime influences the fine structure of the amylopectin component both in amylose and non-amylose starch granules. Copyright © 2017 Elsevier B.V. All rights reserved.

Using diurnal streamflow and conductivity data to monitor and forecast runoff in a snowmelt dominated watershed

NASA Astrophysics Data System (ADS)

Miller, S.; Miller, S. N.

2016-12-01

Natural diurnal fluctuations in streamflow are common in many types of streams and scales for different reasons (i.e. snowmelt, evapotranspiration, infiltration, precipitation). Scientific literature has placed little consideration on the role diurnal cycles as they may appear insignificant from a water management point of view; however, recent insights into the timing and shape of the diurnal cycle have led to new methods for eco-hydrologic characterization of a given watershed. The diurnal effect is usually not detectible from visual investigation of a stream, but requires a minimum of hourly continuous measurement. In the 1990s the United States Geological Survey began collecting hourly river stage measurements for thousands of stream gauge stations across the US, ushering in new methods of analysis and comparison. A nested watershed study with ten stream gauging stations recording sub-hourly river stage was deployed in a snowmelt-dominated region of the Medicine Bow National Forest in southeastern Wyoming in 2013. In addition, at each stream gauging station sub-hourly conductivity and temperature data was recorded to aid in eco-hydrologic characterization of the different watersheds. Early summer results show asymmetry in the diurnal cycle during snowmelt, with a steeper rising and a flatter falling limb. As snowmelt becomes a less contributing component of streamflow later in the season, the asymmetry shifts to a flatter rising limb and steeper falling limb. Stream conductivity is low during snowmelt and begins to gradually increase as baseflow becomes a larger portion of total streamflow. The study region is recovering from a mountain pine beetle epidemic that peaked in 2008. Prior research suggests the bark beetle epidemic has had little effect on annual streamflow patterns; however, several results show an earlier shift in the day of year in which peak annual streamflow is observed. The diurnal cycle is likely to comprise a larger percentage of daily

Regimes of Diurnal Variation of Summer Rainfall over Subtropical East Asia

DOE Office of Scientific and Technical Information (OSTI.GOV)

Yuan W.; Lin W.; Yu, R.

2012-05-01

Using hourly rain gauge records and Tropical Rainfall Measuring Mission 3B42 from 1998 to 2006, the authors present an analysis of the diurnal characteristics of summer rainfall over subtropical East Asia. The study shows that there are four different regimes of distinct diurnal variation of rainfall in both the rain gauge and the satellite data. They are located over the Tibetan Plateau with late-afternoon and midnight peaks, in the western China plain with midnight to early-morning peaks, in the eastern China plain with double peaks in late afternoon and early morning, and over the East China Sea with an early-morningmore » peak. No propagation of diurnal phases is found from the land to the ocean across the coastlines. The different diurnal regimes are highly correlated with the inhomogeneous underlying surface, such as the plateau, plain, and ocean, with physical mechanisms consistent with the large-scale 'mountain-valley' and 'land-sea' breezes and convective instability. These diurnal characteristics over subtropical East Asia can be used as diagnostic metrics to evaluate the physical parameterization and hydrological cycle of climate models over East Asia.« less

Diurnal, seasonal and inter-annual variations in the Schumann resonance parameters

NASA Astrophysics Data System (ADS)

Price, Colin; Melnikov, Alexander

2004-09-01

The Schumann resonances (SR) represent an electromagnetic phenomenon in the Earth's atmosphere related to global lightning activity. The spectral characteristics of the SR modes are defined by their resonant mode amplitude, center frequency and half-width (Q-factor). Long-term (4 years) diurnal and seasonal variations of these parameters are presented based on measurements at a field site in the Negev desert, Israel. Variations of the different modes (8, 14 and 20Hz) and the different electromagnetic components (Hns, Hew and Ez) are presented. The power variations of the various modes and components show three dominant maxima in the diurnal cycle related to lightning activity in south-east Asia (0800UT), Africa (1400UT) and South America (2000UT). The largest global lightning activity occurs during the northern hemisphere summer (JJA) with the southern hemisphere summer (DJF) having the least lightning around the globe. The frequency and half-width (Q-factor) variations of the different modes and SR components are fairly complicated in structure, and will need additional theoretical work to explain their variations. However, the frequency variations are in excellent agreement with previous studies, implying that the frequency variations are robust features of the SR. The inter-annual variability of global lightning activity is shown to vary differently for each of the three major source regions of global lightning.

The diurnal oscillation of MAP (mitogen-activated protein) kinase and adenylyl cyclase activities in the hippocampus depends on the suprachiasmatic nucleus.

PubMed

Phan, Trongha X; Phan, Trongha H; Chan, Guy C-K; Sindreu, Carlos B; Eckel-Mahan, Kristin L; Storm, Daniel R

2011-07-20

Consolidation of hippocampus-dependent memory is dependent on activation of the cAMP/Erk/MAPK (mitogen-activated protein kinase) signal transduction pathway in the hippocampus. Recently, we discovered that adenylyl cyclase and MAPK activities undergo a circadian oscillation in the hippocampus and that inhibition of this oscillation impairs contextual memory. This suggests the interesting possibility that the persistence of hippocampus-dependent memory depends upon the reactivation of MAPK in the hippocampus during the circadian cycle. A key unanswered question is whether the circadian oscillation of this signaling pathway is intrinsic to the hippocampus or is driven by the master circadian clock in the suprachiasmatic nucleus (SCN). To address this question, we ablated the SCN of mice by electrolytic lesion and examined hippocampus-dependent memory as well as adenylyl cyclase and MAPK activities. Electrolytic lesion of the SCN 2 d after training for contextual fear memory reduced contextual memory measured 2 weeks after training, indicating that maintenance of contextual memory depends on the SCN. Spatial memory was also compromised in SCN-lesioned mice. Furthermore, the diurnal oscillation of adenylyl cyclase and MAPK activities in the hippocampus was destroyed by lesioning of the SCN. These data suggest that hippocampus-dependent long-term memory is dependent on the SCN-controlled oscillation of the adenylyl cyclase/MAPK pathway in the hippocampus.

Spectral and diurnal variations in clear sky planetary albedo

NASA Technical Reports Server (NTRS)

Briegleb, B.; Ramanathan, V.

1982-01-01

Spectral and diurnal variations in the clear sky planetary albedo of the earth are calculated using a radiative transfer model to obtain January and July values for a 5 deg x 5 deg global grid. The model employs observed climatological values of temperatures, humidities, snow and sea-ice cover. The diurnal cycle of clear sky albedo is calculated in the following intervals: 0.2-0.5, 0.5-0.7, and 0.7-4 microns. Observed ozone distribution is specified as a function of latitude and season. The 0.2-0.5 micron spectral albedo is 10-20% higher than the total albedo for all latitudes because of Rayleigh scattering; the 0.5-0.7 micron albedo differs from the total albedo by 1-2% for most latitudes, while the 0.7-4 micron albedo is 5-10% lower than the total because of strong atmospheric absorption. Planetary albedo decreases from morning to local noon, with diurnal variations being particularly strong over water.

Time to pay attention: attentional performance time-stamped prefrontal cholinergic activation, diurnality and performance

PubMed Central

Paolone, Giovanna; Lee, Theresa M.; Sarter, Martin

2012-01-01

Although the impairments in cognitive performance that result from shifting or disrupting daily rhythms have been demonstrated, the neuronal mechanisms that optimize fixed time daily performance are poorly understood. We previously demonstrated that daily practice of a sustained attention task (SAT) evokes a diurnal activity pattern in rats. Here we report that SAT practice at a fixed time produced practice time-stamped increases in prefrontal cholinergic neurotransmission that persisted after SAT practice was terminated and in a different environment. SAT time-stamped cholinergic activation occurred irrespective of whether the SAT was practiced during the light or dark phase or in constant light conditions. In contrast, prior daily practice of an operant schedule of reinforcement, albeit generating more rewards and lever presses per session than the SAT, neither activated the cholinergic system nor affected the animals' nocturnal activity pattern. Likewise, food-restricted animals exhibited strong food anticipatory activity (FAA) and attenuated activity during the dark period but FAA was not associated with increases in prefrontal cholinergic activity. Removal of cholinergic neurons impaired SAT performance and facilitated the reemergence of nocturnality. Shifting SAT practice away from a fixed time resulted in significantly lower performance. In conclusion, these experiments demonstrated that fixed time, daily practice of a task assessing attention generates a precisely practice time-stamped activation of the cortical cholinergic input system. Time-stamped cholinergic activation benefits fixed time performance and, if practiced during the light phase, contributes to a diurnal activity pattern. PMID:22933795

Time to pay attention: attentional performance time-stamped prefrontal cholinergic activation, diurnality, and performance.

PubMed

Paolone, Giovanna; Lee, Theresa M; Sarter, Martin

2012-08-29

Although the impairments in cognitive performance that result from shifting or disrupting daily rhythms have been demonstrated, the neuronal mechanisms that optimize fixed-time daily performance are poorly understood. We previously demonstrated that daily practice of a sustained attention task (SAT) evokes a diurnal activity pattern in rats. Here, we report that SAT practice at a fixed time produced practice time-stamped increases in prefrontal cholinergic neurotransmission that persisted after SAT practice was terminated and in a different environment. SAT time-stamped cholinergic activation occurred regardless of whether the SAT was practiced during the light or dark phase or in constant-light conditions. In contrast, prior daily practice of an operant schedule of reinforcement, albeit generating more rewards and lever presses per session than the SAT, neither activated the cholinergic system nor affected the animals' nocturnal activity pattern. Likewise, food-restricted animals exhibited strong food anticipatory activity (FAA) and attenuated activity during the dark phase but FAA was not associated with increases in prefrontal cholinergic activity. Removal of cholinergic neurons impaired SAT performance and facilitated the reemergence of nocturnality. Shifting SAT practice away from a fixed time resulted in significantly lower performance. In conclusion, these experiments demonstrated that fixed-time, daily practice of a task assessing attention generates a precisely practice time-stamped activation of the cortical cholinergic input system. Time-stamped cholinergic activation benefits fixed-time performance and, if practiced during the light phase, contributes to a diurnal activity pattern.

The Diurnal Oscillation of MAP Kinase and Adenylyl Cyclase Activities in the Hippocampus Depends on the SCN

PubMed Central

Phan, Trongha; Chan, Guy; Sindreu, Carlos; Eckel-Mahan, Kristin; Storm, Daniel R.

2011-01-01

Consolidation of hippocampus dependent memory is dependent on activation of the cAMP/ Erk/MAPK signal transduction pathway in the hippocampus. Recently, we discovered that adenylyl cyclase and MAPK activities undergo a circadian oscillation in the hippocampus and that inhibition of this oscillation impairs contextual memory. This suggests the interesting possibility that the persistence of hippocampus-dependent memory depends upon the reactivation of MAPK in the hippocampus during the circadian cycle. A key unanswered question is whether the circadian oscillation of this signaling pathway is intrinsic to the hippocampus or is driven by the master circadian clock in the suprachiasmatic nucleus (SCN). To address this question, we ablated the SCN of mice by electrolytic lesion and examined hippocampus-dependent memory as well as adenylyl cyclase and MAPK activities. Electrolytic lesion of the SCN two days after training for contextual fear memory reduced contextual memory measured two weeks after training indicating that maintenance of contextual memory depends on the SCN. Spatial memory was also compromised in SCN-lesioned mice. Furthermore, the diurnal oscillation of adenylyl cyclase and MAPK activities in the hippocampus was destroyed by lesioning of the SCN. These data suggest that hippocampus-dependent long-term memory is dependent on the SCN-controlled oscillation of the adenylyl cyclase/MAPK pathway in the hippocampus. PMID:21775607

Development and evaluation of an empirical diurnal sea surface temperature model

NASA Astrophysics Data System (ADS)

Weihs, R. R.; Bourassa, M. A.

2013-12-01

An innovative method is developed to determine the diurnal heating amplitude of sea surface temperatures (SSTs) using observations of high-quality satellite SST measurements and NWP atmospheric meteorological data. The diurnal cycle results from heating that develops at the surface of the ocean from low mechanical or shear produced turbulence and large solar radiation absorption. During these typically calm weather conditions, the absorption of solar radiation causes heating of the upper few meters of the ocean, which become buoyantly stable; this heating causes a temperature differential between the surface and the mixed [or bulk] layer on the order of a few degrees. It has been shown that capturing the diurnal cycle is important for a variety of applications, including surface heat flux estimates, which have been shown to be underestimated when neglecting diurnal warming, and satellite and buoy calibrations, which can be complicated because of the heating differential. An empirical algorithm using a pre-dawn sea surface temperature, peak solar radiation, and accumulated wind stress is used to estimate the cycle. The empirical algorithm is derived from a multistep process in which SSTs from MTG's SEVIRI SST experimental hourly data set are combined with hourly wind stress fields derived from a bulk flux algorithm. Inputs for the flux model are taken from NASA's MERRA reanalysis product. NWP inputs are necessary because the inputs need to incorporate diurnal and air-sea interactive processes, which are vital to the ocean surface dynamics, with a high enough temporal resolution. The MERRA winds are adjusted with CCMP winds to obtain more realistic spatial and variance characteristics and the other atmospheric inputs (air temperature, specific humidity) are further corrected on the basis of in situ comparisons. The SSTs are fitted to a Gaussian curve (using one or two peaks), forming a set of coefficients used to fit the data. The coefficient data are combined with

Diurnal cycling of urban aerosols under different weather regimes

NASA Astrophysics Data System (ADS)

Gregorič, Asta; Drinovec, Luka; Močnik, Griša; Remškar, Maja; Vaupotič, Janja; Stanič, Samo

2016-04-01

A one month measurement campaign was performed in summer 2014 in Ljubljana, the capital of Slovenia (population 280,000), aiming to study temporal and spatial distribution of urban aerosols and the mixing state of primary and secondary aerosols. Two background locations were chosen for this purpose, the first one in the city center (urban background - KIS) and the second one in the suburban background (Brezovica). Simultaneous measurements of black carbon (BC) and particle number size distribution of submicron aerosols (PM1) were conducted at both locations. In the summer season emission from traffic related sources is expected to be the main local contribution to BC concentration. Concentrations of aerosol species and gaseous pollutants within the planetary boundary layer are controlled by the balance between emission sources of primary aerosols and gases, production of secondary aerosols, chemical reactions of precursor gases under solar radiation and the rate of dilution by mixing within the planetary boundary layer (PBL) as well as with tropospheric air. Only local emission sources contribute to BC concentration during the stable PBL with low mixing layer height, whereas during the time of fully mixed PBL, regionally transported BC and other aerosols can contribute to the surface measurements. The study describes the diurnal behaviour of the submicron aerosol at the urban and suburban background location under different weather regimes. Particles in three size modes - nucleation (< 25 nm, NUM), Aitken (25 - 90 nm, AIM) and accumulation mode (90 - 800 nm, ACM), as well as BC mass concentration were evaluated separately for sunny, cloudy and rainy days, taking into account modelled values of PBL height. Higher particle number and black carbon concentrations were observed at the urban background (KIS) than at the suburban background location (Brezovica). Significant diurnal pattern of total particle concentration and black carbon concentration was observed at both

Diurnal oscillation of SBE expression in sorghum endosperm

DOE Office of Scientific and Technical Information (OSTI.GOV)

Sun, Chuanxin; Mutisya, J.; Rosenquist, S.

2009-01-15

Spatial and temporal expression patterns of the sorghum SBEI, SBEIIA and SBEIIB genes, encoding, respectively, starch branching enzyme (SBE) I, IIA and IIB, in the developing endosperm of sorghum (Sorghum bicolor) were studied. Full-length genomic and cDNA clones for sorghum was cloned and the SBEIIA cDNA was used together with gene-specific probes for sorghum SBEIIB and SBEI. In contrast to sorghum SBEIIB, which was expressed primarily in endosperm and embryo, SBEIIA was expressed also in vegetative tissues. All three genes shared a similar temporal expression profile during endosperm development, with a maximum activity at 15-24 days after pollination. This ismore » different from barley and maize where SBEI gene activity showed a significantly later onset compared to that of SBEIIA and SBEIIB. Expression of the three SBE genes in the sorghum endosperm exhibited a diurnal rhythm during a 24-h cycle.« less

CRTC2 activation in the suprachiasmatic nucleus, but not paraventricular nucleus, varies in a diurnal fashion and increases with nighttime light exposure.

PubMed

Highland, Julie A; Weiser, Michael J; Hinds, Laura R; Spencer, Robert L

2014-10-01

Entrainment of the intrinsic suprachiasmatic nucleus (SCN) molecular clock to the light-dark cycle depends on photic-driven intracellular signal transduction responses of SCN neurons that converge on cAMP response element-binding protein (CREB)-mediated regulation of gene transcription. Characterization of the CREB coactivator proteins CREB-regulated transcriptional coactivators (CRTCs) has revealed a greater degree of differential activity-dependent modulation of CREB transactivational function than previously appreciated. In confirmation of recent reports, we found an enrichment of crtc2 mRNA and prominent CRTC2 protein expression within the SCN of adult male rats. With use of a hypothalamic organotypic culture preparation for initial CRTC2-reactive antibody characterization, we found that CRTC2 immunoreactivity in hypothalamic neurons shifted from a predominantly cytoplasmic profile under basal culture conditions to a primarily nuclear localization (CRTC2 activation) 30 min after adenylate cyclase stimulation. In adult rat SCN, we found a diurnal variation in CRTC2 activation (peak at zeitgeber time of 4 h and trough at zeitgeber time of 16-20 h) but no variation in the total number of CRTC2-immunoreactive cells. There was no diurnal variation of CRTC2 activation in the hypothalamic paraventricular nucleus, another site of enriched CRTC2 expression. Exposure of rats to light (50 lux) for 30 min during the second half of their dark (nighttime) phase produced CRTC2 activation. We observed in the SCN a parallel change in the expression of a CREB-regulated gene (FOS). In contrast, nighttime light exposure had no effect on CRTC2 activation or FOS expression in the paraventricular nucleus, nor did it affect corticosterone hormone levels. These results suggest that CRTC2 participates in CREB-dependent photic entrainment of SCN function. Copyright © 2014 the American Physiological Society.

Genome-wide survey of B-box proteins in potato (Solanum tuberosum)-Identification, characterization and expression patterns during diurnal cycle, etiolation and de-etiolation.

PubMed

Talar, Urszula; Kiełbowicz-Matuk, Agnieszka; Czarnecka, Jagoda; Rorat, Tadeusz

2017-01-01

Plant B-box domain proteins (BBX) mediate many light-influenced developmental processes including seedling photomorphogenesis, seed germination, shade avoidance and photoperiodic regulation of flowering. Despite the wide range of potential functions, the current knowledge regarding BBX proteins in major crop plants is scarce. In this study, we identify and characterize the StBBX gene family in potato, which is composed of 30 members, with regard to structural properties and expression profiles under diurnal cycle, etiolation and de-etiolations. Based on domain organization and phylogenetic relationships, StBBX genes have been classified into five groups. Using real-time quantitative PCR, we found that expression of most of them oscillates following a 24-h rhythm; however, large differences in expression profiles were observed between the genes regarding amplitude and position of the maximal and minimal expression levels in the day/night cycle. On the basis of the time-of-day/time-of-night, we distinguished three expression groups specifically expressed during the light and two during the dark phase. In addition, we showed that the expression of several StBBX genes is under the control of the circadian clock and that some others are specifically associated with the etiolation and de-etiolation conditions. Thus, we concluded that StBBX proteins are likely key players involved in the complex diurnal and circadian networks regulating plant development as a function of light conditions and day duration.

Individual and Day-to-Day Differences in Active Coping Predict Diurnal Cortisol Patterns among Early Adolescent Girls.

PubMed

Sladek, Michael R; Doane, Leah D; Stroud, Catherine B

2017-01-01

Prior work has identified alterations in activity of the hypothalamic-pituitary-adrenal axis as a potential mechanism underlying stress-induced emotional health problems, which disproportionately impact girls beginning in mid-adolescence. How adolescent girls differ from one another in dispositional coping tendencies and shift specific coping strategies in response to varying stressors have been theorized as important predictors of their adaptation, health, and well-being during this dynamic period of development. The goal of this study was to examine whether individual and day-to-day (within-person) differences in adolescent girls' coping responses are associated with daily patterns of hypothalamic-pituitary-adrenal axis activity, indexed by cortisol. Participants were 122 early adolescent girls (M age  = 12.39) who provided three saliva samples per day for 3 days and completed daily coping reports, as well as a standard coping survey. Participants and primary caregivers also completed objective life stress interviews. On average, girls who were more likely to respond to interpersonal stress with voluntary engagement (active) coping exhibited generally adaptive daily physiological regulation-steeper diurnal cortisol slopes, lower total diurnal cortisol output, and lower cortisol awakening responses. Chronic interpersonal stress level significantly moderated these associations in different ways for two distinct components of the diurnal pattern-the slope and cortisol awakening responses. Regarding within-person differences, using active coping more than usual was associated with higher waking cortisol the following morning, which may help to prepare adolescent girls for perceived daily demands. These findings highlight the interactive influence of stress and coping in the prediction of daily hypothalamic-pituitary-adrenal axis activity and support the stress-buffering role of active coping for adolescent girls.

An "In Situ" Calibration Correction Procedure (KCICLO) Based on AOD Diurnal Cycle: Application to AERONET-El Arenosillo (Spain) AOD Data Series

DOE Office of Scientific and Technical Information (OSTI.GOV)

Cachorro, V. E.; Toledano, C.; Berjon, A.

Aerosol optical depth (AOD) very often shows a distinct diurnal cycle pattern, which seems to be an artifact resulting from an incorrect calibration (or an equivalent effect, such as filter degradation). The shape of this fictitious AOD diurnal cycle varies as the inverse of the solar air mass (m) and the magnitude of the effect is greatest at midday. The observation of this effect is not easy at many field stations, and only those stations with good weather conditions permit an easier detection and the possibility of its correction. By taking advantage of this dependence on the air mass, wemore » propose an improved “in situ” correction-calibration procedure to AOD measured data series. The method is named KCICLO because the determination of a constant K and the behavior of AOD as a cycle (ciclo, in Spanish). We estimate it has an accuracy of 0.2–0.5% for the calibration ratio constant K, or 0.002–0.005 in AOD at field stations. Although the KCICLO is an “in situ” calibration method, we recommend it to be used as an AOD correction method for field stations. At high-altitude sites, it may be used independently of the classical Langley method (CLM). However, we also recommend it to be used as a complement to CLM, improving it considerably. The application of this calibration correction method to the nearly 5 year AOD data series at El Arenosillo (Huelva, southwestern Spain) station belonging to Aerosol Robotic Network (AERONET)-PHOTONS shows that 8 (50%) of 16 filters of the four analyzed Sun photometers were outside of the 0.02 uncertainty of AERONET specification. The largest departures reached values of 0.06. The results show the efficiency of the method and a significant improvement over other “in situ” methods, with no other information required beyond the same AOD data.« less

Effect of suprachiasmatic lesions on diurnal heart rate rhythm in the rat

NASA Technical Reports Server (NTRS)

Saleh, M. A.; Winget, C. M.

1977-01-01

Heart rate and locomotor activity of rats kept under 12L/12D illumination regimen were recorded every six minutes for ten days using implantable radio transmitters. Some of the rats then received bilateral RF lesions into the suprachiasmatic nucleus (SCN). Control sham operations were performed on the rest of the animals. After recovery from surgery, recording of heart rate and locomotor activity was continued for ten days. SCN-lesioned rats showed no significant diurnal fluctuation in heart rate, while normal and sham-operated rats showed the normal diurnal rhythm in that function. The arrhythmic diurnal heart-rate pattern of SCN rats appeared to be correlated with their sporadic activity pattern. The integrity of the suprachiasmatic nucleus is therefore necessary for the generation and/or expression of diurnal rhythmicity in heart rate in the rat.

Diurnal Variation of Tropical Ice Cloud Microphysics: Evidence from Global Precipitation Measurement Microwave Imager Polarimetric Measurements

NASA Astrophysics Data System (ADS)

Gong, Jie; Zeng, Xiping; Wu, Dong L.; Li, Xiaowen

2018-01-01

The diurnal variation of tropical ice clouds has been well observed and examined in terms of the occurring frequency and total mass but rarely from the viewpoint of ice microphysical parameters. It accounts for a large portion of uncertainties in evaluating ice clouds' role on global radiation and hydrological budgets. Owing to the advantage of precession orbit design and paired polarized observations at a high-frequency microwave band that is particularly sensitive to ice particle microphysical properties, 3 years of polarimetric difference (PD) measurements using the 166 GHz channel of Global Precipitation Measurement Microwave Imager (GPM-GMI) are compiled to reveal a strong diurnal cycle over tropical land (30°S-30°N) with peak amplitude varying up to 38%. Since the PD signal is dominantly determined by ice crystal size, shape, and orientation, the diurnal cycle observed by GMI can be used to infer changes in ice crystal properties. Moreover, PD change is found to lead the diurnal changes of ice cloud occurring frequency and total ice mass by about 2 h, which strongly implies that understanding ice microphysics is critical to predict, infer, and model ice cloud evolution and precipitation processes.

Phase Advance of the Light-Dark Cycle Perturbs Diurnal Rhythms of Brain-derived Neurotrophic Factor and Neurotrophin-3 Protein Levels, Which Reduces Synaptophysin-positive Presynaptic Terminals in the Cortex of Juvenile Rats

PubMed Central

Hamatake, Michiko; Miyazaki, Noriko; Sudo, Kaori; Matsuda, Motoko; Sadakata, Tetsushi; Furuya, Asako; Ichisaka, Satoshi; Hata, Yoshio; Nakagawa, Chiaki; Nagata, Koh-ichi; Furuichi, Teiichi; Katoh-Semba, Ritsuko

2011-01-01

In adult rat brains, brain-derived neurotrophic factor (BDNF) rhythmically oscillates according to the light-dark cycle and exhibits unique functions in particular brain regions. However, little is known of this subject in juvenile rats. Here, we examined diurnal variation in BDNF and neurotrophin-3 (NT-3) levels in 14-day-old rats. BDNF levels were high in the dark phase and low in the light phase in a majority of brain regions. In contrast, NT-3 levels demonstrated an inverse phase relationship that was limited to the cerebral neocortex, including the visual cortex, and was most prominent on postnatal day 14. An 8-h phase advance of the light-dark cycle and sleep deprivation induced an increase in BDNF levels and a decrease in NT-3 levels in the neocortex, and the former treatment reduced synaptophysin expression and the numbers of synaptophysin-positive presynaptic terminals in cortical layer IV and caused abnormal BDNF and NT-3 rhythms 1 week after treatment. A similar reduction of synaptophysin expression was observed in the cortices of Bdnf gene-deficient mice and Ca2+-dependent activator protein for secretion 2 gene-deficient mice with abnormal free-running rhythm and autistic-like phenotypes. In the latter mice, no diurnal variation in BDNF levels was observed. These results indicate that regular rhythms of BDNF and NT-3 are essential for correct cortical network formation in juvenile rodents. PMID:21527636

Phase advance of the light-dark cycle perturbs diurnal rhythms of brain-derived neurotrophic factor and neurotrophin-3 protein levels, which reduces synaptophysin-positive presynaptic terminals in the cortex of juvenile rats.

PubMed

Hamatake, Michiko; Miyazaki, Noriko; Sudo, Kaori; Matsuda, Motoko; Sadakata, Tetsushi; Furuya, Asako; Ichisaka, Satoshi; Hata, Yoshio; Nakagawa, Chiaki; Nagata, Koh-ichi; Furuichi, Teiichi; Katoh-Semba, Ritsuko

2011-06-17

In adult rat brains, brain-derived neurotrophic factor (BDNF) rhythmically oscillates according to the light-dark cycle and exhibits unique functions in particular brain regions. However, little is known of this subject in juvenile rats. Here, we examined diurnal variation in BDNF and neurotrophin-3 (NT-3) levels in 14-day-old rats. BDNF levels were high in the dark phase and low in the light phase in a majority of brain regions. In contrast, NT-3 levels demonstrated an inverse phase relationship that was limited to the cerebral neocortex, including the visual cortex, and was most prominent on postnatal day 14. An 8-h phase advance of the light-dark cycle and sleep deprivation induced an increase in BDNF levels and a decrease in NT-3 levels in the neocortex, and the former treatment reduced synaptophysin expression and the numbers of synaptophysin-positive presynaptic terminals in cortical layer IV and caused abnormal BDNF and NT-3 rhythms 1 week after treatment. A similar reduction of synaptophysin expression was observed in the cortices of Bdnf gene-deficient mice and Ca(2+)-dependent activator protein for secretion 2 gene-deficient mice with abnormal free-running rhythm and autistic-like phenotypes. In the latter mice, no diurnal variation in BDNF levels was observed. These results indicate that regular rhythms of BDNF and NT-3 are essential for correct cortical network formation in juvenile rodents.

Verifying Diurnal Variations of Global Precipitation in Three New Global Reanalyses

NASA Astrophysics Data System (ADS)

Wu, S.; Xie, P.; Sun, F.; Joyce, R.

2013-12-01

fine time/space scales collated in the observations. The diurnal cycle of the precipitation is reasonably well reproduced by the reanalyses over many global oceanic and land areas. Diurnal amplitude of the reanalyses precipitation, defined as the standard deviation of the 24 hourly mean values, is smaller than that in the observations over most of the oceanic regions, attributable largely to the continuous weak precipitation throughout the diurnal cycle in all of the three reanalyses. Over ocean, the pattern of diurnal variations of precipitation in the reanalyses is quite similar to that in the observations, with the timing of maximum precipitation shifted by1-3 hours. Over land especially over Africa, the reanalyses tend to produce maximum precipitation around noon, much earlier than that in the observations. Particularly noticeable is the diurnal cycle of warm season precipitation over CONUS in association with the eastward propagation of meso-scale systems distinct in the observations. None of the three new reanalyses are capable of detecting this pattern of diurnal variations. A comprehensive description and diagnostic discussions will be given at the AGU meeting.

Diurnal variation of oxygen and carbonate system parameters in Tampa Bay and Florida Bay

USGS Publications Warehouse

Yates, K.K.; Dufore, C.; Smiley, N.; Jackson, C.; Halley, R.B.

2007-01-01

Oxygen and carbonate system parameters were measured, in situ, over diurnal cycles in Tampa Bay and Florida Bay, Florida. All system parameters showed distinct diurnal trends in Tampa Bay with an average range of diurnal variation of 39.1 μmol kg− 1 for total alkalinity, 165.1 μmol kg− 1 for total CO2, 0.22 for pH, 0.093 mmol L− 1 for dissolved oxygen, and 218.1 μatm for pCO2. Average range of diurnal variation for system parameters in Tampa Bay was 73% to 93% of the seasonal range of variability for dissolved oxygen and pH. All system parameters measured in Florida Bay showed distinct variation over diurnal time-scales. However, clear diurnal trends were less evident. The average range of diurnal variability in Florida Bay was 62.8 μmol kg− 1 for total alkalinity, 130.4 μmol kg− 1 for total CO2, 0.13 for pH, 0.053 mmol L− 1 for dissolved oxygen, and 139.8 μatm for pCO2. The average range of diurnal variation was 14% to 102% of the seasonal ranges for these parameters. Diurnal variability in system parameters was most influenced by primary productivity and respiration of benthic communities in Tampa Bay, and by precipitation and dissolution of calcium carbonate in Florida Bay. Our data indicate that use of seasonal data sets without careful consideration of diurnal variability may impart significant error in calculations of annual carbon and oxygen budgets. These observations reinforce the need for higher temporal resolution measurements of oxygen and carbon system parameters in coastal ecosystems.

Aerobic Toluene Degraders in the Rhizosphere of a Constructed Wetland Model Show Diurnal Polyhydroxyalkanoate Metabolism

PubMed Central

Lünsmann, Vanessa; Kappelmeyer, Uwe; Taubert, Anja; Nijenhuis, Ivonne; von Bergen, Martin; Müller, Jochen A.; Jehmlich, Nico

2016-01-01

ABSTRACT Constructed wetlands (CWs) are successfully applied for the treatment of waters contaminated with aromatic compounds. In these systems, plants provide oxygen and root exudates to the rhizosphere and thereby stimulate microbial degradation processes. Root exudation of oxygen and organic compounds depends on photosynthetic activity and thus may show day-night fluctuations. While diurnal changes in CW effluent composition have been observed, information on respective fluctuations of bacterial activity are scarce. We investigated microbial processes in a CW model system treating toluene-contaminated water which showed diurnal oscillations of oxygen concentrations using metaproteomics. Quantitative real-time PCR was applied to assess diurnal expression patterns of genes involved in aerobic and anaerobic toluene degradation. We observed stable aerobic toluene turnover by Burkholderiales during the day and night. Polyhydroxyalkanoate synthesis was upregulated in these bacteria during the day, suggesting that they additionally feed on organic root exudates while reutilizing the stored carbon compounds during the night via the glyoxylate cycle. Although mRNA copies encoding the anaerobic enzyme benzylsuccinate synthase (bssA) were relatively abundant and increased slightly at night, the corresponding protein could not be detected in the CW model system. Our study provides insights into diurnal patterns of microbial processes occurring in the rhizosphere of an aquatic ecosystem. IMPORTANCE Constructed wetlands are a well-established and cost-efficient option for the bioremediation of contaminated waters. While it is commonly accepted knowledge that the function of CWs is determined by the interplay of plants and microorganisms, the detailed molecular processes are considered a black box. Here, we used a well-characterized CW model system treating toluene-contaminated water to investigate the microbial processes influenced by diurnal plant root exudation. Our results

Digital Daily Cycles of Individuals

NASA Astrophysics Data System (ADS)

Aledavood, Talayeh; Lehmann, Sune; Saramäki, Jari

2015-10-01

Humans, like almost all animals, are phase-locked to the diurnal cycle. Most of us sleep at night and are active through the day. Because we have evolved to function with this cycle, the circadian rhythm is deeply ingrained and even detectable at the biochemical level. However, within the broader day-night pattern, there are individual differences: e.g., some of us are intrinsically morning-active, while others prefer evenings. In this article, we look at digital daily cycles: circadian patterns of activity viewed through the lens of auto-recorded data of communication and online activity. We begin at the aggregate level, discuss earlier results, and illustrate differences between population-level daily rhythms in different media. Then we move on to the individual level, and show that there is a strong individual-level variation beyond averages: individuals typically have their distinctive daily pattern that persists in time. We conclude by discussing the driving forces behind these signature daily patterns, from personal traits (morningness/eveningness) to variation in activity level and external constraints, and outline possibilities for future research.

Light exposure influences the diurnal oscillation of gut microbiota in mice.

PubMed

Wu, Guangyan; Tang, Wenli; He, Yan; Hu, Jingjuan; Gong, Shenhai; He, Zhanke; Wei, Guoquan; Lv, Liyi; Jiang, Yong; Zhou, Hongwei; Chen, Peng

2018-06-18

The gut microbiota exhibit diurnal compositional and functional oscillations that influence the host homeostasis. However, the upstream factors that affect the microbial oscillations remain elusive. Here, we focused on the potential impact of light exposure, the main factor that affects the host circadian oscillation, on the diurnal oscillations of intestinal microflora to explore the upstream factor that governs the fluctuations of the gut microbes. The gut microbiota of the mice that were underwent regular light/dark (LD) cycles exhibited a robust rhythm at both compositional and functional level, in all parts of the intestine. Comparably, constant darkness (Dark-Dark, DD) led to the loss of the rhythmic oscillations in almost all parts of the intestine. Additionally, the abundance of Clostridia in DD conditions was dramatically enhanced in the small intestine. Our data indicated light exposure is the upstream factor that governs the regular diurnal fluctuations of gut microbiota in vivo. Copyright © 2018 Elsevier Inc. All rights reserved.

Quantifying Diurnal Cloud Radiative Effects by Cloud Type in the Tropical Western Pacific

DOE Office of Scientific and Technical Information (OSTI.GOV)

Burleyson, Casey D.; Long, Charles N.; Comstock, Jennifer M.

2015-06-01

Cloud radiative effects are examined using long-term datasets collected at the three Department of Energy (DOE) Atmospheric Radiation Measurement (ARM) Climate Research Facilities in the tropical western Pacific. We quantify the surface radiation budget, cloud populations, and cloud radiative effects by partitioning the data by cloud type, time of day, and as a function of large scale modes of variability such as El Niño Southern Oscillation (ENSO) phase and wet/dry seasons at Darwin. The novel facet of our analysis is that we break aggregate cloud radiative effects down by cloud type across the diurnal cycle. The Nauru cloud populations andmore » subsequently the surface radiation budget are strongly impacted by ENSO variability whereas the cloud populations over Manus only shift slightly in response to changes in ENSO phase. The Darwin site exhibits large seasonal monsoon related variations. We show that while deeper convective clouds have a strong conditional influence on the radiation reaching the surface, their limited frequency reduces their aggregate radiative impact. The largest source of shortwave cloud radiative effects at all three sites comes from low clouds. We use the observations to demonstrate that potential model biases in the amplitude of the diurnal cycle and mean cloud frequency would lead to larger errors in the surface energy budget compared to biases in the timing of the diurnal cycle of cloud frequency. Our results provide solid benchmarks to evaluate model simulations of cloud radiative effects in the tropics.« less

Hydration status and diurnal trophic interactions shape microbial community function in desert biocrusts

NASA Astrophysics Data System (ADS)

Kim, Minsu; Or, Dani

2017-12-01

Biological soil crusts (biocrusts) are self-organised thin assemblies of microbes, lichens, and mosses that are ubiquitous in arid regions and serve as important ecological and biogeochemical hotspots. Biocrust ecological function is intricately shaped by strong gradients of water, light, oxygen, and dynamics in the abundance and spatial organisation of the microbial community within a few millimetres of the soil surface. We report a mechanistic model that links the biophysical and chemical processes that shape the functioning of biocrust representative microbial communities that interact trophically and respond dynamically to cycles of hydration, light, and temperature. The model captures key features of carbon and nitrogen cycling within biocrusts, such as microbial activity and distribution (during early stages of biocrust establishment) under diurnal cycles and the associated dynamics of biogeochemical fluxes at different hydration conditions. The study offers new insights into the highly dynamic and localised processes performed by microbial communities within thin desert biocrusts.

Diurnal and Nocturnal Flight Activity of Blow Flies (Diptera: Calliphoridae) in a Rainforest Fragment in Brazil: Implications for the Colonization of Homicide Victims.

PubMed

Soares, Thiago F; Vasconcelos, Simao D

2016-11-01

Nocturnal flight of blow flies (Diptera: Calliphoridae) is a controversial issue in forensic entomology. We performed two field experiments to investigate the diurnal and nocturnal activity of six blow fly species in a rainforest fragment in Brazil. Initially, nocturnal (17:30-05:30) versus diurnal (05:30-17:30) flight activity was investigated. Only 3.9% of adults were collected at night, mostly the native species Mesembrinella bicolor, and nocturnal oviposition did not occur. In the second experiment, collection of adults took place at the following intervals: 05:30-08:30, 08:30-11:30, 11:30-14:30, and 14:30-17:30. The proportions of adults did not differ significantly among the four diurnal intervals, except for Hemilucilia segmentaria, which was captured more frequently in the early morning. Calliphoridae has predominantly diurnal behavior, not laying eggs in darkness. The association of the native species M. bicolor, Hemilucilia semidiaphana, and H. segmentaria to forested areas reinforces the forensic relevance of data on their flight pattern. © 2016 American Academy of Forensic Sciences.

Diurnal variation in rates of calcification and carbonate sediment dissolution in Florida Bay

USGS Publications Warehouse

Yates, K.K.; Halley, R.B.

2006-01-01

Water quality and circulation in Florida Bay (a shallow, subtropical estuary in south Florida) are highly dependent upon the development and evolution of carbonate mud banks distributed throughout the Bay. Predicting the effect of natural and anthropogenic perturbations on carbonate sedimentation requires an understanding of annual, seasonal, and daily variations in the biogenic and inorganic processes affecting carbonate sediment precipitation and dissolution. In this study, net calcification rates were measured over diurnal cycles on 27 d during summer and winter from 1999 to 2003 on mud banks and four representative substrate types located within basins between mud banks. Substrate types that were measured in basins include seagrass beds of sparse and intermediate density Thalassia sp., mud bottom, and hard bottom communities. Changes in total alkalinity were used as a proxy for calcification and dissolution. On 22 d (81%), diurnal variation in rates of net calcification was observed. The highest rates of net carbonate sediment production (or lowest rates of net dissolution) generally occurred during daylight hours and ranged from 2.900 to -0.410 g CaCO3 m-2 d-1. The lowest rates of carbonate sediment production (or net sediment dissolution) occurred at night and ranged from 0.210 to -1.900 g CaCO3 m -2 night-1. During typical diurnal cycles, dissolution during the night consumed an average of 29% of sediment produced during the day on banks and 68% of sediment produced during the day in basins. Net sediment dissolution also occurred during daylight, but only when there was total cloud cover, high turbidity, or hypersalinity. Diurnal variation in calcification and dissolution in surface waters and surface sediments of Florida Bay is linked to cycling of carbon dioxide through photosynthesis and respiration. Estimation of long-term sediment accumulation rates from diurnal rates of carbonate sediment production measured in this study indicates an overall average

Diurnal Variation of Tropical Ice Cloud Microphysics inferred from Global Precipitation Measurement Microwave Imager (GPM-GMI)'s Polarimetric Measurement

NASA Astrophysics Data System (ADS)

Gong, J.; Zeng, X.; Wu, D. L.; Li, X.

2017-12-01

Diurnal variation of tropical ice cloud has been well observed and examined in terms of the area of coverage, occurring frequency, and total mass, but rarely on ice microphysical parameters (habit, size, orientation, etc.) because of lack of direct measurements of ice microphysics on a high temporal and spatial resolutions. This accounts for a great portion of the uncertainty in evaluating ice cloud's role on global radiation and hydrological budgets. The design of Global Precipitation Measurement (GPM) mission's procession orbit gives us an unprecedented opportunity to study the diurnal variation of ice microphysics on the global scale for the first time. Dominated by cloud ice scattering, high-frequency microwave polarimetric difference (PD, namely the brightness temperature difference between vertically- and horizontally-polarized paired channel measurements) from the GPM Microwave Imager (GMI) has been proven by our previous study to be very valuable to infer cloud ice microphysical properties. Using one year of PD measurements at 166 GHz, we found that cloud PD exhibits a strong diurnal cycle in the tropics (25S-25N). The peak PD amplitude varies as much as 35% over land, compared to only 6% over ocean. The diurnal cycle of the peak PD value is strongly anti-correlated with local ice cloud occurring frequency and the total ice mass with a leading period of 3 hours for the maximum correlation. The observed PD diurnal cycle can be explained by the change of ice crystal axial ratio. Using a radiative transfer model, we can simulate the observed 166 GHz PD-brightness temperature curve as well as its diurnal variation using different axial ratio values, which can be caused by the diurnal variation of ice microphysical properties including particle size, percentage of horizontally-aligned non-spherical particles, and ice habit. The leading of the change of PD ahead of ice cloud mass and occurring frequency implies the important role microphysics play in the

Diurnal variation in the coupling of photosynthetic electron transport and carbon fixation in iron-limited phytoplankton in the NE subarctic Pacific

NASA Astrophysics Data System (ADS)

Schuback, N.; Flecken, M.; Maldonado, M. T.; Tortell, P. D.

2015-10-01

Active chlorophyll a fluorescence approaches, including fast repetition rate fluorometry (FRRF), have the potential to provide estimates of phytoplankton primary productivity at unprecedented spatial and temporal resolution. FRRF-derived productivity rates are based on estimates of charge separation at PSII (ETRRCII), which must be converted into ecologically relevant units of carbon fixation. Understanding sources of variability in the coupling of ETRRCII and carbon fixation provides physiological insight into phytoplankton photosynthesis, and is critical for the application of FRRF as a primary productivity measurement tool. In the present study, we simultaneously measured phytoplankton carbon fixation and ETRRCII in the iron-limited NE subarctic Pacific, over the course of a diurnal cycle. We show that rates of ETRRCII are closely tied to the diurnal cycle in light availability, whereas rates of carbon fixation appear to be influenced by endogenous changes in metabolic energy allocation under iron-limited conditions. Unsynchronized diurnal oscillations of the two rates led to 3.5 fold changes in the conversion factor coupling ETRRCII and carbon fixation (Φe:C / nPSII). Consequently, diurnal variability in phytoplankton carbon fixation cannot be adequately captured with FRRF approaches if a constant conversion factor is applied. Utilizing several auxiliary photophysiological measurements, we observed that a high conversion factor is associated with conditions of excess light, and correlates with the expression of non-photochemical quenching (NPQ) in the pigment antenna, as derived from FRRF measurements. The observed correlation between NPQ and the conversion factor Φe:C / nPSII has the potential to improve estimates of phytoplankton carbon fixation rates from FRRF measurements alone.

Diurnal variation in the coupling of photosynthetic electron transport and carbon fixation in iron-limited phytoplankton in the NE subarctic Pacific

NASA Astrophysics Data System (ADS)

Schuback, Nina; Flecken, Mirkko; Maldonado, Maria T.; Tortell, Philippe D.

2016-02-01

Active chlorophyll a fluorescence approaches, including fast repetition rate fluorometry (FRRF), have the potential to provide estimates of phytoplankton primary productivity at an unprecedented spatial and temporal resolution. FRRF-derived productivity rates are based on estimates of charge separation in reaction center II (ETRRCII), which must be converted into ecologically relevant units of carbon fixation. Understanding sources of variability in the coupling of ETRRCII and carbon fixation provides physiological insight into phytoplankton photosynthesis and is critical for the application of FRRF as a primary productivity measurement tool. In the present study, we simultaneously measured phytoplankton carbon fixation and ETRRCII in the iron-limited NE subarctic Pacific over the course of a diurnal cycle. We show that rates of ETRRCII are closely tied to the diurnal cycle in light availability, whereas rates of carbon fixation appear to be influenced by endogenous changes in metabolic energy allocation under iron-limited conditions. Unsynchronized diurnal oscillations of the two rates led to 3.5-fold changes in the conversion factor between ETRRCII and carbon fixation (Kc / nPSII). Consequently, diurnal variability in phytoplankton carbon fixation cannot be adequately captured with FRRF approaches if a constant conversion factor is applied. Utilizing several auxiliary photophysiological measurements, we observed that a high conversion factor is associated with conditions of excess light and correlates with the increased expression of non-photochemical quenching (NPQ) in the pigment antenna, as derived from FRRF measurements. The observed correlation between NPQ and Kc / nPSII requires further validation but has the potential to improve estimates of phytoplankton carbon fixation rates from FRRF measurements alone.

Diurnal cycles control the fate of contaminants at an Andean river confluence impacted by legacy mining

NASA Astrophysics Data System (ADS)

Pasten, P.; Guerra, P. A.; Simonson, K.; Bonilla, C.; Pizarro, G. E.; Escauriaza, C. R.; González, C.

2014-12-01

The importance of hydrologic-geochemical interactions in arid environments is a controlling factor in quality and quantity of water available for human consumption and agriculture. When acid drainage affects these watersheds, water quality is gravely degraded. Despite its effect on watersheds, the relationship between time changes in hydrological variables and water quality in arid regions has not been studied thoroughly. Temporal variations in acid drainage can control when the transport of toxic elements is increased. We performed field work at the Azufre River (pH 2, E.C~10.9 mS/cm) and Caracarani River (pH 8.7, E.C~1.2 mS/cm) confluence, located in the Northern Chilean Altiplano (at 4000 m asl). We registered stream flowrates (total flowrate~430 L/s), temperature and electric conductivity (E.C) hourly using in-stream data loggers during one year. We also measured turbidity and pH during one field survey at different distances from the junction, as a proxy of the formation of iron-aluminum particles that cycle trace elements in these environments. We found turbidity-pH diurnal cycles were caused by upstream hourly changes in upstream flowrate: when the Caracarani River flowrate reached its daily peak, particle formation occurred, while the dissolution of particles occurred when the Azufre River reached its maximum value. This last process occurred due to upstream freeze-thaw cycles. This study shows how the dynamics of natural confluences determines chemical transport. The formation of particles enriched in toxic elements can promote settling as a natural attenuation process, while their dissolution will produce their release and transport long distances downstream. It is important to consider time as an important variable in water quality monitoring and in water management infrastructure where pulses of contamination can have potentially negative effects in its use. Acknowledgements: Funding was provided by "Proyecto Fondecyt 1130936" and "CONICYT

Diurnal Course of Evaporation From the Dead Sea in Summer: A Distinct Double Peak Induced by Solar Radiation and Night Sea Breeze

NASA Astrophysics Data System (ADS)

Lensky, N. G.; Lensky, I. M.; Peretz, A.; Gertman, I.; Tanny, J.; Assouline, S.

2018-01-01

Partitioning between the relative effects of the radiative and aerodynamic components of the atmospheric forcing on evaporation is challenging since diurnal distributions of wind speed and solar radiation typically overlap. The Dead Sea is located about a 100 km off the Eastern Mediterranean coast, where and the Mediterranean Sea breeze front reaches it after sunset. Therefore, in the Dead Sea the peaks of solar radiation and wind speed diurnal cycles in the Dead Sea are distinctly separated in time, offering a unique opportunity to distinguish between their relative impacts on evaporation. We present mid-summer eddy covariance and meteorological measurements of evaporation rate and surface energy fluxes over the Dead Sea. The evaporation rate is characterized by a clear diurnal cycle with a daytime peak, few hours after solar radiation peak, and a nighttime peak coincident with wind speed peak. Evaporation rate is minimum during sunrise and sunset. Measurements of evaporation rate from two other water bodies that are closer to the Mediterranean coast, Eshkol Reservoir, and Lake Kinneret, present a single afternoon peak, synchronous with the sea breeze. The inland diurnal evaporation rate cycle varies with the distance from the Mediterranean coast, following the propagation of sea breeze front: near the coast, wind speed, and radiation peaks are close and consequently a single daily evaporation peak appears in the afternoon; at the Dead Sea, about a 100 km inland, the sea breeze front arrives at sunset, resulting in a diurnal evaporation cycle characterized by a distinct double peak.

Morning-to-evening differences in oxygen uptake kinetics in short-duration cycling exercise.

PubMed

Brisswalter, Jeanick; Bieuzen, François; Giacomoni, Magali; Tricot, Véronique; Falgairette, Guy

2007-01-01

This study analyzed diurnal variations in oxygen (O(2)) uptake kinetics and efficiency during a moderate cycle ergometer exercise. Fourteen physically active diurnally active male subjects (age 23+/-5 yrs) not specifically trained at cycling first completed a test to determine their ventilatory threshold (T(vent)) and maximal oxygen consumption (VO(2max)); one week later, they completed four bouts of testing in the morning and evening in a random order, each separated by at least 24 h. For each period of the day (07:00-08:30 h and 19:00-20:30 h), subjects performed two bouts. Each bout was composed of a 5 min cycling exercise at 45 W, followed after 5 min rest by a 10 min cycling exercise at 80% of the power output associated with T(vent). Gas exchanges were analyzed breath-by-breath and fitted using a mono-exponential function. During moderate exercise, the time constant and amplitude of VO(2) kinetics were significantly higher in the morning compared to the evening. The net efficiency increased from the morning to evening (17.3+/-4 vs. 20.5+/-2%; p<0.05), and the variability of cycling cadence was greater during the morning than evening (+34%; p<0.05). These findings suggest that VO(2) responses are affected by the time of day and could be related to variability in muscle activity pattern.

Diurnal cycle and seasonal variation of cloud cover over the Tibetan Plateau as determined from Himawari-8 new-generation geostationary satellite data.

PubMed

Shang, Huazhe; Letu, Husi; Nakajima, Takashi Y; Wang, Ziming; Ma, Run; Wang, Tianxing; Lei, Yonghui; Ji, Dabin; Li, Shenshen; Shi, Jiancheng

2018-01-18

Analysis of cloud cover and its diurnal variation over the Tibetan Plateau (TP) is highly reliant on satellite data; however, the accuracy of cloud detection from both polar-orbiting and geostationary satellites over this area remains unclear. The new-generation geostationary Himawari-8 satellites provide high-resolution spatial and temporal information about clouds over the Tibetan Plateau. In this study, the cloud detection of MODIS and AHI is investigated and validated against CALIPSO measurements. For AHI and MODIS, the false alarm rate of AHI and MODIS in cloud identification over the TP was 7.51% and 1.94%, respectively, and the cloud hit rate was 73.55% and 80.15%, respectively. Using hourly cloud-cover data from the Himawari-8 satellites, we found that at the monthly scale, the diurnal cycle in cloud cover over the TP tends to increase throughout the day, with the minimum and maximum cloud fractions occurring at 10:00 a.m. and 18:00 p.m. local time. Due to the limited time resolution of polar-orbiting satellites, the underestimation of MODIS daytime average cloud cover is approximately 4.00% at the annual scale, with larger biases during the spring (5.40%) and winter (5.90%).

Diurnal variations of summer precipitation over the regions east to Tibetan Plateau

NASA Astrophysics Data System (ADS)

Wu, Yang; Huang, Anning; Huang, Danqing; Chen, Fei; Yang, Ben; Zhou, Yang; Fang, Dexian; Zhang, Lujun; Wen, Lijuan

2017-12-01

Based on the hourly gauge-satellite merged precipitation product with the horizontal resolution of 0.1° latitude/longitude during 2008-2014, diurnal variations of the summer precipitation amount (PA), frequency (PF), and intensity (PI) with different duration time over the regions east to Tibetan Plateau have been systematically revealed in this study. Results indicate that the eight typical precipitation diurnal patterns identified by the cluster analysis display pronounced regional features among the plateaus, basins, plains, hilly and coastal areas. The precipitation diurnal cycles are significantly affected by the sub-grid terrain fluctuations. The PA, PF and PI of the total rainfall show much more pronounced double diurnal peaks with the sub-grid topography standard deviation (SD) decreased. Meanwhile, the diurnal peaks of PA and PF (PI) strengthen (weaken) with the sub-grid topography SD enhanced. Over the elevated mountain ranges, southeastern hilly and coastal regions, the PA and PF diurnal patterns of the total rainfall generally show predominant late-afternoon peaks, which are closely associated with the short-duration (≤slant 3 h) rainfall. Along the Tibetan Plateau to its downstream, the diurnal peaks of PA, PF and PI for the total rainfall all exhibit obvious eastward phase time delay mainly due to the diurnal evolutions of long-duration (> 6 h) rainfall. However, the 4-6 h rainfall leads to the eastward phase time delay of the total rainfall along the Taihang Mountains to its downstream. Further mechanism analysis suggests that the midnight to morning diurnal evolution of the long-duration rainfall is closely associated with the diurnal variations of the upward branches of thermally driven mountain-plain solenoids and the water vapor transport associated with the accelerated nocturnal southwesterly winds. The late-afternoon peak of the short-duration PA over the southeastern hilly and coastal regions is ascribed to the strong local thermal

Ranges of diurnal variation and the pattern of body temperature, blood pressure and heart rate in laboratory beagle dogs.

PubMed

Miyazaki, Hiroyasu; Yoshida, Mutsumi; Samura, Keiji; Matsumoto, Hiroyoshi; Ikemoto, Fumihiko; Tagawa, Masahiro

2002-01-01

Ranges in diurnal variation and the patterns of body temperature (T), blood pressure (BP), heart rate (HR) and locomotor activity (LA) in 61 laboratory beagle dogs were analyzed using a telemetry system. Body temperature, BP, HR and LA increased remarkably at feeding time. Locomotor activity increased sporadically during the other periods. Body temperature was maintained at the higher value after feeding but had decreased by 0.2 C by early the next morning. Blood pressure fell to a lower value after feeding but had increased by 2.8% by early the next morning. Heart rate decreased progressively after feeding and was 14.5% lower the next morning. This study determined that in laboratory beagles the ranges of diurnal variation and patterns of T, BP and HR are significantly different from those reported in humans and rodents, and that over 24 hr these physiological changes were associated with their sporadic wake-sleep cycles of the dogs.

Diurnal variability of gas phase and surface water ethanol in southeastern North Carolina, USA

NASA Astrophysics Data System (ADS)

Kieber, R. J.; Powell, J. P.; Foley, L.; Mead, R. N.; Willey, J. D.; Avery, G. B.

2017-11-01

Diurnal variations in gas phase and surface water concentrations of ethanol and acetaldehyde were investigated at five locations in southeastern North Carolina, USA. There were distinct diurnal oscillations observed in gas phase concentrations with maxima occurring in late afternoon suggesting that photochemical production is an important process in the cycling of these analytes in the troposphere. The rapid decrease in concentrations after the mid day maximum suggests that there is also an atmospheric photochemical sink for both analytes most likely involving photo produced hydroxyl radicals with a half-life on the order of hours rather than days at ground level. Ethanol concentrations in the surface microlayer taken at the same time as gas phase samples had a very similar diurnal profile suggesting photochemical processes, in addition to atmospheric deposition, play a role in the aqueous phase cycling of both analytes. The concentration of ethanol and acetaldehyde increased significantly in flasks containing freshwater collected from the Cape Fear River exposed to simulated sunlight for 6 h underscoring the importance of in situ photochemical production. Results of this study are significant because they represent the first simultaneous analyses of the temporal variability of ethanol and acetaldehyde concentrations in the gas and aqueous phases. These measurements are essential in order to better define the processes involved in the global biogeochemical cycling of ethanol both now and in the future as our use of the biofuel continues to grow.

How snowpack heterogeneity affects diurnal streamflow timing

USGS Publications Warehouse

Lundquist, J.D.; Dettinger, M.D.

2005-01-01

Diurnal cycles of streamflow in snow-fed rivers can be used to infer the average time a water parcel spends in transit from the top of the snowpack to a stream gauge in the river channel. This travel time, which is measured as the difference between the hour of peak snowmelt in the afternoon and the hour of maximum discharge each day, ranges from a few hours to almost a full day later. Travel times increase with longer percolation times through deeper snowpacks, and prior studies of small basins have related the timing of a stream's diurnal peak to the amount of snow stored in a basin. However, in many larger basins the time of peak flow is nearly constant during the first half of the melt season, with little or no variation between years. This apparent self-organization at larger scales can be reproduced by employing heterogeneous observations of snow depths and melt rates in a model that couples porous medium flow through an evolving snowpack with free surface flow in a channel. Copyright 2005 by the American Geophysical Union.

Starch-Branching Enzyme IIa Is Required for Proper Diurnal Cycling of Starch in Leaves of Maize1[OA

PubMed Central

Yandeau-Nelson, Marna D.; Laurens, Lieve; Shi, Zi; Xia, Huan; Smith, Alison M.; Guiltinan, Mark J.

2011-01-01

Starch-branching enzyme (SBE), a glucosyl transferase, is required for the highly regular pattern of α-1,6 bonds in the amylopectin component of starch. In the absence of SBEIIa, as shown previously in the sbe2a mutant of maize (Zea mays), leaf starch has drastically reduced branching and the leaves exhibit a severe senescence-like phenotype. Detailed characterization of the maize sbe2a mutant revealed that SBEIIa is the primary active branching enzyme in the leaf and that in its absence plant growth is affected. Both seedling and mature sbe2a mutant leaves do not properly degrade starch during the night, resulting in hyperaccumulation. In mature sbe2a leaves, starch hyperaccumulation is greatest in visibly senescing regions but also observed in green tissue and is correlated to a drastic reduction in photosynthesis within the leaf. Starch granules from sbe2a leaves observed via scanning electron microscopy and transmission electron microscopy analyses are larger, irregular, and amorphous as compared with the highly regular, discoid starch granules observed in wild-type leaves. This appears to trigger premature senescence, as shown by an increased expression of genes encoding proteins known to be involved in senescence and programmed cell death processes. Together, these results indicate that SBEIIa is required for the proper diurnal cycling of transitory starch within the leaf and suggest that SBEIIa is necessary in producing an amylopectin structure amenable to degradation by starch metabolism enzymes. PMID:21508184

Blunted Diurnal Cortisol Activity in Healthy Adults with Childhood Adversity.

PubMed

Kuras, Yuliya I; Assaf, Naomi; Thoma, Myriam V; Gianferante, Danielle; Hanlin, Luke; Chen, Xuejie; Fiksdal, Alexander; Rohleder, Nicolas

2017-01-01

Childhood adversity, such as neglect, or physical, emotional, or sexual abuse, is prevalent in the U.S. and worldwide, and connected to an elevated incidence of disease in adulthood. A pathway in this relationship might be altered hypothalamic-pituitary-adrenal (HPA) axis functioning, as a result of differential hippocampal development in early life. A blunted diurnal cortisol slope is a precursor for many disorders. While studies have focused on HPA reactivity in relation to childhood adversity, there has been markedly less research on basal HPA functioning in those with low-to-moderate adversity. Based on previous research, we hypothesized that adults with low-to-moderate childhood adversity would have altered HPA axis functioning, as evidenced by a blunted diurnal cortisol slope and altered cortisol awakening response (CAR). Healthy adults aged 18-65 ( n = 61 adults; 31 males and 30 females) completed the Childhood Trauma Questionnaire. Participants provided at-home saliva samples on two consecutive days at wake-up, and 30 min, 1, 4, 9, and 13 h later; samples were averaged over the 2 days. We found that low-to-moderate childhood adversity predicted lower morning cortisol (β = -0.34, p = 0.007, R 2 = 0.21), as well as a blunted cortisol slope (β = 2.97, p = 0.004, R 2 = 0.22), but found no association with CAR (β = 0.19, p = 0.14, R 2 = 0.12). Overall, we found that in healthy participants, low-to-moderate adversity in childhood is associated with altered basal HPA activity in adulthood. Our findings indicate that even low levels of childhood adversity may predispose individuals to disease associated with HPA dysregulation in later life.

Ups and Downs: Daily Cycles of Adolescent Moods.

ERIC Educational Resources Information Center

Barber, Bonnie L.; Jacobson, Kristen C.; Miller, Kristelle E.; Petersen, Anne C.

1998-01-01

Examined diurnal patterns of adolescents' stress, affect, and arousal. Found that gender, depression risk status, and day of week influenced mean levels of adolescent moods but were not associated with differences in mood patterns throughout the day. Suggested that adolescents' emotional states follow a diurnal cycle stemming from endogenous…

Evolutionary Maps: A new model for the analysis of conceptual development, with application to the diurnal cycle

NASA Astrophysics Data System (ADS)

Navarro, Manuel

2014-05-01

This paper presents a model of how children generate concrete concepts from perception through processes of differentiation and integration. The model informs the design of a novel methodology (evolutionary maps or emaps), whose implementation on certain domains unfolds the web of itineraries that children may follow in the construction of concrete conceptual knowledge and pinpoints, for each conception, the architecture of the conceptual change that leads to the scientific concept. Remarkably, the generative character of its syntax yields conceptions that, if unknown, amount to predictions that can be tested experimentally. Its application to the diurnal cycle (including the sun's trajectory in the sky) indicates that the model is correct and the methodology works (in some domains). Specifically, said emap predicts a number of exotic trajectories of the sun in the sky that, in the experimental work, were drawn spontaneously both on paper and a dome. Additionally, the application of the emaps theoretical framework in clinical interviews has provided new insight into other cognitive processes. The field of validity of the methodology and its possible applications to science education are discussed.

Evidence of a unique and common genetic etiology between the CAR and the remaining part of the diurnal cycle: A study of 14 year-old twins.

PubMed

Ouellet-Morin, Isabelle; Brendgen, Mara; Girard, Alain; Lupien, Sonia J; Dionne, Ginette; Vitaro, Frank; Boivin, Michel

2016-04-01

By and large, studies have reported moderate contributions of genetic factors to cortisol secreted in the early morning and even smaller estimates later in the day. In contrast, the cortisol awakening response (CAR) has shown much stronger heritability estimates, which prompted the hypothesis that the etiology of cortisol secretion may vary according to the time of day. A direct test of this possibility has, however, not yet been performed. To describe the specific and common etiology of the CAR, awakening level and cortisol change from morning to evening in an age-homogenous sample of twin adolescents. A total of 592 participants of the Québec Newborn Twin Study, a population-based 1995-1998 cohort of families with twins in Canada, have collected saliva at awakening, 30 min later, at the end of afternoon and in the evening over four collection days. Multivariate Cholesky models showed both specific and common sources of variance between the CAR, awakening and cortisol diurnal change. The CAR had the strongest heritability estimates, which, for the most part, did not overlap with the other indicators. Conversely, similar magnitudes of genetic and environmental contributions were detected at awakening and for diurnal change, which partially overlapped. Our study unraveled differences between the latent etiologies of the CAR and the rest of the diurnal cycle, which may contribute to identify regulatory genes and environments and detangle how these indicators each relate to physical and mental health. Copyright © 2016 Elsevier Ltd. All rights reserved.

Diurnal lighting patterns and habitat alter opsin expression and colour preferences in a killifish

PubMed Central

Johnson, Ashley M.; Stanis, Shannon; Fuller, Rebecca C.

2013-01-01

Spatial variation in lighting environments frequently leads to population variation in colour patterns, colour preferences and visual systems. Yet lighting conditions also vary diurnally, and many aspects of visual systems and behaviour vary over this time scale. Here, we use the bluefin killifish (Lucania goodei) to compare how diurnal variation and habitat variation (clear versus tannin-stained water) affect opsin expression and the preference to peck at different-coloured objects. Opsin expression was generally lowest at midnight and dawn, and highest at midday and dusk, and this diurnal variation was many times greater than variation between habitats. Pecking preference was affected by both diurnal and habitat variation but did not correlate with opsin expression. Rather, pecking preference matched lighting conditions, with higher preferences for blue at noon and for red at dawn/dusk, when these wavelengths are comparatively scarce. Similarly, blue pecking preference was higher in tannin-stained water where blue wavelengths are reduced. In conclusion, L. goodei exhibits strong diurnal cycles of opsin expression, but these are not tightly correlated with light intensity or colour. Temporally variable pecking preferences probably result from lighting environment rather than from opsin production. These results may have implications for the colour pattern diversity observed in these fish. PMID:23698009

Applying ECOSTRESS Diurnal Cycle Land Surface Temperature and Evapotranspiration to Agricultural Soil and Water Management

NASA Astrophysics Data System (ADS)

Pestana, S. J.; Halverson, G. H.; Barker, M.; Cooley, S.

2016-12-01

Increased demand for agricultural products and limited water supplies in Guanacaste, Costa Rica have encouraged the improvement of water management practices to increase resource use efficiency. Remotely sensed evapotranspiration (ET) data can contribute by providing insights into variables like crop health and water loss, as well as better inform the use of various irrigation techniques. EARTH University currently collects data in the region that are limited to costly and time-intensive in situ observations and will greatly benefit from the expanded spatial and temporal resolution of remote sensing measurements from the ECOsystem Spaceborne Thermal Radiometer Experiment on Space Station (ECOSTRESS). In this project, Moderate Resolution Imaging Spectroradiometer (MODIS) Priestly-Taylor Jet Propulsion Laboratory (PT-JPL) data, with a resolution of 5 km per pixel, was used to demonstrate to our partners at EARTH University the application of remotely sensed ET measurements. An experimental design was developed to provide a method of applying future ECOSTRESS data, at the higher resolution of 70 m per pixel, to research in managing and implementing sustainable farm practices. Our investigation of the diurnal cycle of land surface temperature, net radiation, and evapotranspiration will advance the model science for ECOSTRESS, which will be launched in 2018 and installed on the International Space Station.

Diurnal Rhythms in Blood Cell Populations and the Effect of Acute Sleep Deprivation in Healthy Young Men

PubMed Central

Ackermann, Katrin; Revell, Victoria L.; Lao, Oscar; Rombouts, Elwin J.; Skene, Debra J.; Kayser, Manfred

2012-01-01

Study Objectives: The sleep/wake cycle is accompanied by changes in circulating numbers of immune cells. The goal of this study was to provide an in-depth characterization of diurnal rhythms in different blood cell populations and to investigate the effect of acute sleep deprivation on the immune system, as an indicator of the body's acute stress response. Design: Observational within-subject design. Setting: Home environment and Clinical Research Centre. Participants: 15 healthy male participants aged 23.7 ± 5.4 (standard deviation) yr. Interventions: Total sleep deprivation. Measurements and Results: Diurnal rhythms of several blood cell populations were assessed under a normal sleep/wake cycle followed by 29 hr of extended wakefulness. The effect of condition (sleep versus sleep deprivation) on peak time and amplitude was investigated. Interindividual variation of, and the level of correlation between, the different cell populations was assessed. Comprehensive nonlinear curve fitting showed significant diurnal rhythms for all blood cell types investigated, with CD4 (naïve) cells exhibiting the most robust rhythms independent of condition. For those participants exhibiting significant diurnal rhythms in blood cell populations, only the amplitude of the granulocyte rhythm was significantly reduced by sleep deprivation. Granulocytes were the most diverse population, being most strongly affected by condition, and showed the lowest correlations with any other given cell type while exhibiting the largest interindividual variation in abundance. Conclusions: Granulocyte levels and diurnal rhythmicity are directly affected by acute sleep deprivation; these changes mirror the body's immediate immune response upon exposure to stress. Citation: Ackermann K; Revell VL; Lao O; Rombouts EJ; Skene DJ; Kayser M. Diurnal rhythms in blood cell populations and the effect of acute sleep deprivation in healthy young men. SLEEP 2012;35(7):933-940. PMID:22754039

Aerobic Toluene Degraders in the Rhizosphere of a Constructed Wetland Model Show Diurnal Polyhydroxyalkanoate Metabolism.

PubMed

Lünsmann, Vanessa; Kappelmeyer, Uwe; Taubert, Anja; Nijenhuis, Ivonne; von Bergen, Martin; Heipieper, Hermann J; Müller, Jochen A; Jehmlich, Nico

2016-07-15

Constructed wetlands (CWs) are successfully applied for the treatment of waters contaminated with aromatic compounds. In these systems, plants provide oxygen and root exudates to the rhizosphere and thereby stimulate microbial degradation processes. Root exudation of oxygen and organic compounds depends on photosynthetic activity and thus may show day-night fluctuations. While diurnal changes in CW effluent composition have been observed, information on respective fluctuations of bacterial activity are scarce. We investigated microbial processes in a CW model system treating toluene-contaminated water which showed diurnal oscillations of oxygen concentrations using metaproteomics. Quantitative real-time PCR was applied to assess diurnal expression patterns of genes involved in aerobic and anaerobic toluene degradation. We observed stable aerobic toluene turnover by Burkholderiales during the day and night. Polyhydroxyalkanoate synthesis was upregulated in these bacteria during the day, suggesting that they additionally feed on organic root exudates while reutilizing the stored carbon compounds during the night via the glyoxylate cycle. Although mRNA copies encoding the anaerobic enzyme benzylsuccinate synthase (bssA) were relatively abundant and increased slightly at night, the corresponding protein could not be detected in the CW model system. Our study provides insights into diurnal patterns of microbial processes occurring in the rhizosphere of an aquatic ecosystem. Constructed wetlands are a well-established and cost-efficient option for the bioremediation of contaminated waters. While it is commonly accepted knowledge that the function of CWs is determined by the interplay of plants and microorganisms, the detailed molecular processes are considered a black box. Here, we used a well-characterized CW model system treating toluene-contaminated water to investigate the microbial processes influenced by diurnal plant root exudation. Our results indicated stable

Diurnal time-activity budgets of redheads (Aythya americana) wintering in seagrass beds and coastal ponds in Louisiana and Texas

USGS Publications Warehouse

Michot, T.C.; Woodin, M.C.; Adair, S.E.; Moser, E.B.

2006-01-01

Diurnal time-activity budgets were determined for wintering redheads (Aythya americana) from estuarine seagrass beds in Louisiana (Chandeleur Sound) and Texas (Laguna Madre) and from ponds adjacent to the Laguna Madre. Activities differed (p<0.0001) by location, month, and diurnal time period. Resting and feeding were the most frequent activities of redheads at the two estuarine sites, whereas drinking was almost nonexistent. Birds on ponds in Texas engaged most frequently in resting and drinking, but feeding was very infrequent. Redheads from the Louisiana estuarine site rested less than birds in Texas at either the Laguna Madre or freshwater ponds. Redheads in Louisiana fed more than birds in Texas; this was partially because of weather differences (colder temperatures in Louisiana), but the location effect was still significant even when we adjusted the model for weather effects. Redheads in Louisiana showed increased resting and decreased feeding as winter progressed, but redheads in Texas did not exhibit a seasonal pattern in either resting or feeding. In Louisiana, birds maintained a high level of feeding activity during the early morning throughout the winter, whereas afternoon feeding tapered off in mid- to late-winter. Texas birds showed a shift from morning feeding in early winter to afternoon feeding in late winter. Males and females at both Chandeleur Sound and Laguna Madre showed differences in their activities, but because the absolute difference seldom exceeded 2%, biological significance is questionable. Diurnal time-activity budgets of redheads on the wintering grounds are influenced by water salinities and the use of dietary fresh water, as well as by weather conditions, tides, and perhaps vegetation differences between sites. The opportunity to osmoregulate via dietary freshwater, vs. via nasal salt glands, may have a significant effect on behavioral allocations. ?? Springer 2006.

Chronic sciatic neuropathy in rat reduces voluntary wheel running activity with concurrent chronic mechanical allodynia

PubMed Central

Whitehead, RA; Lam, NL; Sun, MS; Sanchez, JJ; Noor, S; Vanderwall, AG; Petersen, TR; Martin, HB

2016-01-01

BACKGROUND Animal models of peripheral neuropathy produced by a number of manipulations are assessed for the presence of pathological pain states such as allodynia. While stimulus-induced behavioral assays are frequently used and important to examine allodynia (i.e. sensitivity to light mechanical touch; von Frey fiber test) other measures of behavior that reflect overall function are not only complementary to stimulus-induced responsive measures, but are also critical to gain a complete understanding of the effects of the pain model on quality of life, a clinically relevant aspect of pain on general function. Voluntary wheel running activity in rodent models of inflammatory and muscle pain is emerging as a reliable index of general function that extends beyond stimulus-induced behavioral assays. Clinically, reports of increased pain intensity occur at night, a period typically characterized with reduced activity during the diurnal cycle. We therefore examined in rats whether alterations in wheel running activity were more robust during the inactive phase compared to the active phase of their diurnal cycle in a widely used rodent model of chronic peripheral neuropathic pain, the sciatic nerve chronic constriction injury (CCI) model. METHODS In adult male Sprague Dawley rats, baseline (BL) hindpaw threshold responses to light mechanical touch were assessed using the von Frey test prior to measuring BL activity levels using freely accessible running wheels (1 hr/day for 7 sequential days) to quantify distance traveled. Running wheel activity BL values are expressed as total distance traveled (m). The overall experimental design was: following BL measures, rats underwent either sham or CCI surgery followed by repeated behavioral re-assessment of hindpaw thresholds and wheel running activity levels for up to 18 days after surgery. Specifically, separate groups of rats were assessed for wheel running activity levels (1 hr total/trial) during the onset (within first 2

SEASONAL AND DIURNAL ACTIVITY PATTERNS IN ANT (HYMENOPTERA: FORMICIDAE) COMMUNITIES IN A VEGETATION TRANSITION REGION OF SOUTHEASTERN NEW MEXICO

EPA Science Inventory

The densities of active ant colonies were estimated in three habitats: creosotebush shrubland, grassland, and shinnery-oak mesquite dunes. Diurnal foraging patterns were studied at bait boards. Species richness of ant communities in this transitional region (8-12 species) was co...

Estrus- and steroid-induced changes in circadian rhythms in a diurnal rodent, Octodon degus.

PubMed

Labyak, S E; Lee, T M

1995-09-01

Diurnal Octodon degus exhibited marked alterations in activity and temperature in conjunction with the 3 wk estrous cycle when housed in LD12:12 light cycle. On the day of estrus, mean daily activity increases 109%, mean core temperature rises .4 degree C, activity onset is advanced 2 h, and amplitudes of both rhythms decline compared with the 3 days prior to estrus. On the day following estrus, activity onset was delayed 4.9 h, and mean activity and core temperature fell below that of the preestrus period. Ovariectomy significantly reduced mean temperature (.98 degree C) but did not significantly alter mean activity, and eliminated cyclic effects of estrus. Estrogen replacement led to a nonsignificant elevation in mean activity and core temperature with no change in the phase angle of entrainment. Progesterone replacement significantly reduced mean core temperature and mean activity, while only the phase angle difference between temperature minimum and activity onset was significantly altered. Intact degus maintained in constant darkness displayed only transient fluctuations in activity onset and temperature minimum during and after estrus. Estrogen or progesterone treatment of ovariectomized, free-running degus altered mean temperature and activity levels, but did not influence tau. Changes in phase angle of entrainment during estrus are not the result of hormone effects on the circadian clock but likely reflect increased or decreased levels of activity.

(abstract) Variations in Polarimetric Backscatter of Saline Ice Grown Under Diurnal Thermal Cycling Condition

NASA Technical Reports Server (NTRS)

Nghiem, S. V.; Kwok, R.; Yueh, S. H.; Kong, J. A.; Hsu, C. C.; Ding, K. H.

1995-01-01

An experiment was carried out in January 1994 at the Geophysical Research Facility in the Cold Regions Research and Engineering Laboratory. To investigate effects on polarimetric scattering signatures of sea ice growth under diurnal temperature variations, an ice sheet was grown for 2.5 days for the thickness of 10 cm and a polarimetric radar operating at C-band was used to obtain backscattering data in conjunction with ice-characterization measurements. The ice sheet was grown in the late morning of January 19, 1994. The initial growth rate was slow due to high insolation and temperature. As the air temperature dropped during the night, the growth rate increased significantly. The air temperature changed drastically from about -10(deg)C to -35(deg)C between day and night. The temperature cycle was repeated during the next day and the growth rate varied in the same manner. The surface of the ice was partially covered by frost flowers and the areal coverage increased as the ice became thicker. Throughout the ice growth duration of 2.5 days, polarimetric backscatter data were collected at roughly every centimeter of ice growth. For each set of radar measurements of saline ice, a set of calibration measurements was carried out with trihedrial corner reflectors and a metallic sphere. Measured polarimetric backscattering coefficients of the ice sheet reveal a strong correlation between radar data and temperature variations. As the temperature increased (decreased), the backscatter increased (decreased) correspondingly. From the ice-characterization data, temperatures of the air, at the ice-air interface, and in the ice layer had the same variation trend. Another interesting experimental observation is that the salinity measured as a function of ice depth from a sample of 10-cm thich ice indicated that the salinity variations had a similar cycle as the temperature; i.e., the salinity profile recorded the history of the temperature variations. Characterization data of the

Using cloud and climate data to understand warm season hydrometeorology from diurnal to monthly timescales

NASA Astrophysics Data System (ADS)

Betts, A. K.; Tawfik, A. B.; Desjardins, R. L.

2016-12-01

We use 600 station years of hourly data from 14 stations on the Canadian Prairies to map the warm season hydrometeorology. The months from April (after snowmelt) to September, have a very similar coupling between surface thermodynamics and opaque cloud cover, which has been calibrated to give cloud radiative forcing. We can derive both the mean diurnal ranges and the diurnal imbalances as a function of opaque cloud cover. For the monthly diurnal climate, we compute the coupling coefficients with opaque cloud cover and lagged precipitation. In April the diurnal cycle climate has memory of precipitation back to freeze-up in November. During the growing season months of June, July and August, there is memory of precipitation back to March. Monthly mean temperature depends strongly on cloud but little on precipitation, while monthly mean mixing ratio depends on precipitation, but rather little on cloud. The coupling coefficients to cloud and precipitation change with increasing monthly precipitation anomaly. This observational climate analysis provides a firm basis for model evaluation.

Linking diurnal trends in methylmercury concentration and organic matter photo-reactivity in wetlands of the Yolo Bypass, California

NASA Astrophysics Data System (ADS)

Fleck, J. A.; Downing, B. D.; Saraceno, J.; Gill, G.; Stephenson, M.; Bergamaschi, B. A.

2008-12-01

Aqueous concentrations of methylmercury (MeHg) are known to vary temporally and spatially due to multiple concurrent production and loss mechanisms, and due to variations in the hydrologic connectivity between the methylating substrate (most commonly the benthos) and the overlying water compartments. Diurnal trends in MeHg production, bacterial demethylation, photo-demethylation, diffusion and advection transport processes have been identified and investigated; however, the magnitude and relative importance of each process in mediating overlying water MeHg concentrations, is not well known in natural wetland systems. Temporal variations in aqueous MeHg concentrations may impact the biological accumulation of MeHg into the base of the aquatic food chain, and may challenge regulatory efforts designed to mitigate MeHg exports from point and non-point sources. To identify the possible "hot moments" during the diurnal cycle, surface water MeHg concentrations were monitored in two agricultural wetland settings (wild rice and white rice fields) over a 24- hour period within the Yolo Bypass Wildlife Area, California using a combination of in situ optical sensors and traditional surface-water grab samples. In the wild rice field, MeHg concentrations doubled from 1 ng/L to 2 ng/L over the nighttime hours and returned to 1 ng/L during the daylight hours, whereas the white rice field showed no significant variation in MeHg concentration (0.73 +/- 0.08 ng/L) throughout the diurnal cycle. Similar trends were observed when MeHg data was expressed as a percentage of total Hg, with both wetland habitats exhibiting similar levels (20% MeHg) following the nighttime period and the wild rice field declining to 10% in the early evening. Field parameters measured in situ (including: solar radiation, pH, dissolved oxygen, and temperature) exhibited large diurnal trends in both wetlands, whereas optical proxies for dissolved organic matter (DOM) composition mirrored the fluctuations in Me

Analysis of migrating diurnal tides detected in FORMOSAT-3/COSMIC temperature data

NASA Astrophysics Data System (ADS)

Pirscher, B.; Foelsche, U.; Borsche, M.; Kirchengast, G.; Kuo, Y.-H.

2010-07-01

The characteristics of atmospheric tides in the upper troposphere and lower stratosphere region are investigated using radio occultation (RO) measurements performed by the Formosa Satellite Mission-3/Constellation Observing System for Meteorology, Ionosphere, and Climate (FORMOSAT-3/COSMIC) satellite constellation and compared to tides observed in short-term forecast model fields of European Centre for Medium-Range Weather Forecasts (ECMWF) and National Centers for Environmental Prediction (NCEP). Spectral analysis of 2 years of monthly data (2007 to 2008) yields the migrating diurnal tide to be the largest spectral component. This diurnal tide shows similar temporal, latitudinal, and altitudinal characteristics in all data sets equatorward of 50°. Beyond 50°, COSMIC local time sampling is insufficient within 1 month, which prevents space-time spectral analysis from isolating atmospheric waves. Diurnal tides of temperature are characterized by largest amplitudes in the tropics (0.8 K to 1.0 K at an altitude of 30 km). Amplitudes of diurnal tides analyzed in model data are more pronounced by ˜20%. An annual cycle of the amplitudes, characteristically linked to the movement of the intertropical convergence zone, is clearly revealed. Tropical diurnal phase features downward progression of waves fronts with a vertical wavelength of 20 km. Extratropical diurnal tides are most pronounced in the model data sets with amplitudes of up to 0.5 K at 30 km. In this analysis we also see the influence of high-altitude initialization of RO data by background information in using data processed by two different centers (University Corporation for Atmospheric Research (UCAR) and Wegener Center (WEGC)). UCAR data, initialized by a climatology without tidal information, exhibit no appreciable extratropical diurnal tides, while WEGC data, initialized by ECMWF forecasts, show more pronounced ones. Overall the results underpin the utility of the local-time resolving COSMIC RO

Diurnal sampling reveals significant variation in CO2 emission from a tropical productive lake.

PubMed

Reis, P C J; Barbosa, F A R

2014-08-01

It is well accepted in the literature that lakes are generally net heterotrophic and supersaturated with CO2 because they receive allochthonous carbon inputs. However, autotrophy and CO2 undersaturation may happen for at least part of the time, especially in productive lakes. Since diurnal scale is particularly important to tropical lakes dynamics, we evaluated diurnal changes in pCO2 and CO2 flux across the air-water interface in a tropical productive lake in southeastern Brazil (Lake Carioca) over two consecutive days. Both pCO2 and CO2 flux were significantly different between day (9:00 to 17:00) and night (21:00 to 5:00) confirming the importance of this scale for CO2 dynamics in tropical lakes. Net heterotrophy and CO2 outgassing from the lake were registered only at night, while significant CO2 emission did not happen during the day. Dissolved oxygen concentration and temperature trends over the diurnal cycle indicated the dependence of CO2 dynamics on lake metabolism (respiration and photosynthesis). This study indicates the importance of considering the diurnal scale when examining CO2 emissions from tropical lakes.

Diurnal changes in ocean color in coastal waters

NASA Astrophysics Data System (ADS)

Arnone, Robert; Vandermeulen, Ryan; Ladner, Sherwin; Ondrusek, Michael; Kovach, Charles; Yang, Haoping; Salisbury, Joseph

2016-05-01

Coastal processes can change on hourly time scales in response to tides, winds and biological activity, which can influence the color of surface waters. These temporal and spatial ocean color changes require satellite validation for applications using bio-optical products to delineate diurnal processes. The diurnal color change and capability for satellite ocean color response were determined with in situ and satellite observations. Hourly variations in satellite ocean color are dependent on several properties which include: a) sensor characterization b) advection of water masses and c) diurnal response of biological and optical water properties. The in situ diurnal changes in ocean color in a dynamic turbid coastal region in the northern Gulf of Mexico were characterized using above water spectral radiometry from an AErosol RObotic NETwork (AERONET -WavCIS CSI-06) site that provides up to 8-10 observations per day (in 15-30 minute increments). These in situ diurnal changes were used to validate and quantify natural bio-optical fluctuations in satellite ocean color measurements. Satellite capability to detect changes in ocean color was characterized by using overlapping afternoon orbits of the VIIRS-NPP ocean color sensor within 100 minutes. Results show the capability of multiple satellite observations to monitor hourly color changes in dynamic coastal regions that are impacted by tides, re-suspension, and river plume dispersion. Hourly changes in satellite ocean color were validated with in situ observation on multiple occurrences during different times of the afternoon. Also, the spatial variability of VIIRS diurnal changes shows the occurrence and displacement of phytoplankton blooms and decay during the afternoon period. Results suggest that determining the temporal and spatial changes in a color / phytoplankton bloom from the morning to afternoon time period will require additional satellite coverage periods in the coastal zone.

Ten-Year Climatology of Summertime Diurnal Rainfall Rate Over the Conterminous U.S.

NASA Technical Reports Server (NTRS)

Matsui, Toshihisa; Mocko, David; Lee, Myong-In; Tao, Wei-Kuo; Suarez, Max J.; Pielke, Roger A., Sr.

2010-01-01

Diurnal cycles of summertime rainfall rates are examined over the conterminous United States, using radar-gauge assimilated hourly rainfall data. As in earlier studies, rainfall diurnal composites show a well-defined region of rainfall propagation over the Great Plains and an afternoon maximum area over the south and eastern portion of the United States. Zonal phase speeds of rainfall in three different small domains are estimated, and rainfall propagation speeds are compared with background zonal wind speeds. Unique rainfall propagation speeds in three different regions can be explained by the evolution of latent-heat theory linked to the convective available potential energy, than by gust-front induced or gravity wave propagation mechanisms.

The Rice B-Box Zinc Finger Gene Family: Genomic Identification, Characterization, Expression Profiling and Diurnal Analysis

PubMed Central

Huang, Jianyan; Zhao, Xiaobo; Weng, Xiaoyu; Wang, Lei; Xie, Weibo

2012-01-01

Background The B-box (BBX) -containing proteins are a class of zinc finger proteins that contain one or two B-box domains and play important roles in plant growth and development. The Arabidopsis BBX gene family has recently been re-identified and renamed. However, there has not been a genome-wide survey of the rice BBX (OsBBX) gene family until now. Methodology/Principal Findings In this study, we identified 30 rice BBX genes through a comprehensive bioinformatics analysis. Each gene was assigned a uniform nomenclature. We described the chromosome localizations, gene structures, protein domains, phylogenetic relationship, whole life-cycle expression profile and diurnal expression patterns of the OsBBX family members. Based on the phylogeny and domain constitution, the OsBBX gene family was classified into five subfamilies. The gene duplication analysis revealed that only chromosomal segmental duplication contributed to the expansion of the OsBBX gene family. The expression profile of the OsBBX genes was analyzed by Affymetrix GeneChip microarrays throughout the entire life-cycle of rice cultivar Zhenshan 97 (ZS97). In addition, microarray analysis was performed to obtain the expression patterns of these genes under light/dark conditions and after three phytohormone treatments. This analysis revealed that the expression patterns of the OsBBX genes could be classified into eight groups. Eight genes were regulated under the light/dark treatments, and eleven genes showed differential expression under at least one phytohormone treatment. Moreover, we verified the diurnal expression of the OsBBX genes using the data obtained from the Diurnal Project and qPCR analysis, and the results indicated that many of these genes had a diurnal expression pattern. Conclusions/Significance The combination of the genome-wide identification and the expression and diurnal analysis of the OsBBX gene family should facilitate additional functional studies of the OsBBX genes. PMID:23118960

Influence of menarche on the relation between diurnal cortisol production and ventral striatum activity during reward anticipation

PubMed Central

LeMoult, Joelle; Colich, Natalie L.; Sherdell, Lindsey; Hamilton, J. Paul; Gotlib, Ian H.

2015-01-01

Adolescence is characterized by an increase in risk-taking and reward-seeking behaviors. In other populations, increased risk taking has been associated with tighter coupling between cortisol production and ventral striatum (VS) activation during reward anticipation; this relation has not yet been examined, however, as a function of adolescent development. This study examined the influence of pubertal development on the association between diurnal cortisol production and VS activity during reward anticipation. Pre- and post-menarcheal girls collected diurnal cortisol and completed an functional magnetic resonance imaging-based monetary incentive delay task, from which we extracted estimates of VS activity during the anticipation of reward, anticipation of loss and anticipation of non-incentive neutral trials. Post-menarcheal girls showed greater coupling between the cortisol awakening response and VS activation during anticipation of reward and loss than did their pre-menarcheal counterparts. Post-menarcheal girls did not differ from pre-menarcheal girls in their cortisol-VS coupling during anticipation of neutral trials, suggesting that puberty-related changes in cortisol-VS coupling are specific to affective stimuli. Interestingly, behavioral responses during the task indicate that post-menarcheal girls are faster to engage with affective stimuli than are pre-menarcheal girls. Thus, post-menarcheal girls exhibit neurobiological and behavioral patterns that have been associated with risk taking and that may underlie the dramatic increase in risk-taking behavior documented during adolescence. PMID:25678549

Diurnal Variations of the Flux Imbalance Over Homogeneous and Heterogeneous Landscapes

NASA Astrophysics Data System (ADS)

Zhou, Yanzhao; Li, Dan; Liu, Heping; Li, Xin

2018-05-01

It is well known that the sum of the turbulent sensible and latent heat fluxes as measured by the eddy-covariance method is systematically lower than the available energy (i.e., the net radiation minus the ground heat flux). We examine the separate and joint effects of diurnal and spatial variations of surface temperature on this flux imbalance in a dry convective boundary layer using the Weather Research and Forecasting model. Results show that, over homogeneous surfaces, the flux due to turbulent-organized structures is responsible for the imbalance, whereas over heterogeneous surfaces, the flux due to mesoscale or secondary circulations is the main contributor to the imbalance. Over homogeneous surfaces, the flux imbalance in free convective conditions exhibits a clear diurnal cycle, showing that the flux-imbalance magnitude slowly decreases during the morning period and rapidly increases during the afternoon period. However, in shear convective conditions, the flux-imbalance magnitude is much smaller, but slightly increases with time. The flux imbalance over heterogeneous surfaces exhibits a diurnal cycle under both free and shear convective conditions, which is similar to that over homogeneous surfaces in free convective conditions, and is also consistent with the general trend in the global observations. The rapid increase in the flux-imbalance magnitude during the afternoon period is mainly caused by the afternoon decay of the turbulent kinetic energy (TKE). Interestingly, over heterogeneous surfaces, the flux imbalance is linearly related to the TKE and the difference between the potential temperature and surface temperature, ΔT; the larger the TKE and ΔT values, the smaller the flux-imbalance magnitude.

Interannual, seasonal and diurnal Mars surface environmental cycles observed from Viking to Curiosity

NASA Astrophysics Data System (ADS)

Martinez, German; Vicente-Retortillo, Álvaro; Kemppinen, Osku; Fischer, Erik; Fairen, Alberto G.; Guzewich, Scott David; Haberle, Robert; Lemmon, Mark T.; Newman, Claire E.; Renno, Nilton O.; Richardson, Mark I.; Smith, Michael D.; De la Torre, Manuel; Vasavada, Ashwin R.

2016-10-01

We analyze in-situ environmental data from the Viking landers to the Curiosity rover to estimate atmospheric pressure, near-surface air and ground temperature, relative humidity, wind speed and dust opacity with the highest confidence possible. We study the interannual, seasonal and diurnal variability of these quantities at the various landing sites over a span of more than twenty Martian years to characterize the climate on Mars and its variability. Additionally, we characterize the radiative environment at the various landing sites by estimating the daily UV irradiation (also called insolation and defined as the total amount of solar UV energy received on flat surface during one sol) and by analyzing its interannual and seasonal variability.In this study we use measurements conducted by the Viking Meteorology Instrument System (VMIS) and Viking lander camera onboard the Viking landers (VL); the Atmospheric Structure Instrument/Meteorology (ASIMET) package and the Imager for Mars Pathfinder (IMP) onboard the Mars Pathfinder (MPF) lander; the Miniature Thermal Emission Spectrometer (Mini-TES) and Pancam instruments onboard the Mars Exploration Rovers (MER); the Meteorological Station (MET), Thermal Electrical Conductivity Probe (TECP) and Phoenix Surface Stereo Imager (SSI) onboard the Phoenix (PHX) lander; and the Rover Environmental Monitoring Station (REMS) and Mastcam instrument onboard the Mars Science Laboratory (MSL) rover.A thorough analysis of in-situ environmental data from past and present missions is important to aid in the selection of the Mars 2020 landing site. We plan to extend our analysis of Mars surface environmental cycles by using upcoming data from the Temperature and Wind sensors (TWINS) instrument onboard the InSight mission and the Mars Environmental Dynamics Analyzer (MEDA) instrument onboard the Mars 2020 mission.

Studying Diurnal Variations of Aerosols with NASA MERRA-2 Reanalysis Data

NASA Technical Reports Server (NTRS)

Shen, Suhung; Ostrenga, Dana M.; Zeng, Jian; Vollmer, Bruce E.

2018-01-01

Aerosols play an important role in atmospheric dynamics, climate variations, and Earth's energy cycle by altering the radiation balance in the atmosphere through interaction with clouds, providing fertilizer for forests and canopy, and as a supply of iron to the ocean over long time periods. Studies suggest that much of the feedback between dust aerosols and dynamics is associated with diurnal and synoptic scale variability. However, the lack of sub-daily resolution of aerosols from satellite observations makes it difficult to study the diurnal characteristics, especially over tropical and subtropical regions. Investigation of this topic utilizes over 37 years of simulated global aerosol products from NASA atmospheric reanalysis, in the second Modern-Era Retrospective analysis for Research and Applications (MERRA-2) data set, available from NASA Goddard Earth Science Data and Information Services Center (GES DISC). MERRA-2 covers the period 1980-present, and is continuing as an ongoing climate analysis. Aerosol assimilation is included throughout the period, using data from MODIS, MISR, AERONET, and AVHRR (in the pre-EOS period). The aerosols are assimilated using the MERRA-2 aerosol model, which interacts directly with radiation parameterization, and is radiatively coupled with atmospheric model dynamics in the Goddard Earth Observing System Model, Version 5 (GEOS-5). Hourly, monthly, and monthly diurnal data are available at spatial resolution of 0.5o x 0.625o (latitude x longitude). By using MERRA-2 hourly and monthly diurnal products, different aerosol diurnal variabilities are observed over North America, Africa, Asia, and Australia, that may be due to different meteorological conditions and aerosol sources. The presentation will also provide an overview of MERRA-2 data services at GES DISC, such as how to find and download data, and how to quickly visualize and analyze data online with Giovanni.

Arvicanthis ansorgei, a Novel Model for the Study of Sleep and Waking in Diurnal Rodents.

PubMed

Hubbard, Jeffrey; Ruppert, Elisabeth; Calvel, Laurent; Robin-Choteau, Ludivine; Gropp, Claire-Marie; Allemann, Caroline; Reibel, Sophie; Sage-Ciocca, Dominique; Bourgin, Patrice

2015-06-01

Sleep neurobiology studies use nocturnal species, mainly rats and mice. However, because their daily sleep/wake organization is inverted as compared to humans, a diurnal model for sleep studies is needed. To fill this gap, we phenotyped sleep and waking in Arvicanthis ansorgei, a diurnal rodent widely used for the study of circadian rhythms. Video-electroencephalogram (EEG), electromyogram (EMG), and electrooculogram (EOG) recordings. Rodent sleep laboratory. Fourteen male Arvicanthis ansorgei, aged 3 mo. 12 h light (L):12 h dark (D) baseline condition, 24-h constant darkness, 6-h sleep deprivation. Wake and rapid eye movement (REM) sleep showed similar electrophysiological characteristics as nocturnal rodents. On average, animals spent 12.9 h ± 0.4 awake per 24-h cycle, of which 6.88 h ± 0.3 was during the light period. NREM sleep accounted for 9.63 h ± 0.4, which of 5.13 h ± 0.2 during dark period, and REM sleep for 89.9 min ± 6.7, which of 52.8 min ± 4.4 during dark period. The time-course of sleep and waking across the 12 h light:12 h dark was overall inverted to that observed in rats or mice, though with larger amounts of crepuscular activity at light and dark transitions. A dominant crepuscular regulation of sleep and waking persisted under constant darkness, showing the lack of a strong circadian drive in the absence of clock reinforcement by external cues, such as a running wheel. Conservation of the homeostatic regulation was confirmed with the observation of higher delta power following sustained waking periods and a 6-h sleep deprivation, with subsequent decrease during recovery sleep. Arvicanthis ansorgei is a valid diurnal rodent model for studying the regulatory mechanisms of sleep and so represents a valuable tool for further understanding the nocturnality/diurnality switch. © 2015 Associated Professional Sleep Societies, LLC.

Diurnal variations in personal care products in seawater and mussels at three Mediterranean coastal sites.

PubMed

Picot-Groz, Marina; Fenet, Hélène; Martinez Bueno, Maria Jesus; Rosain, David; Gomez, Elena

2018-03-01

The presence of personal care products (PCPs) in the marine environment is of major concern. PCPs, UV filters, and musks can enter the marine environment indirectly through wastewater or directly via recreational activities. We conducted this study to document patterns in the occurrence of seven PCPs at three coastal sites impacted by recreational activities during 1 day. The study focused on diurnal variations in these seven PCPs in seawater and indigenous mussels. In seawater, UV filters showed diurnal variations that mirrored variations in recreational activities at the sites. Ethylhexyl methoxycinnamate (EHMC) and octocrylene (OC) water concentrations increased from under the limit of quantification in the morning to 106 and 369 ng/L, respectively, when recreational activities were the highest. In mussels, diurnal variations in OC were observed, with the lowest concentrations recorded in the morning and then increasing throughout the day. As Mytilus spp. are widely used as sentinels in coastal pollution monitoring programs (mussel watch), our findings on diurnal variations could enhance sampling recommendations for recreational sites impacted by PCPs.

How stable are diurnal cortisol activity indices in healthy individuals? Evidence from three multi-wave studies

PubMed Central

Ross, Kharah M.; Murphy, Michael L.M.; Adam, Emma K.; Chen, Edith; Miller, Gregory E.

2013-01-01

Summary Background Indices of cortisol activity, including the cortisol awakening response (CAR), diurnal slope, and cortisol output across the day (total daily output), are often studied as mechanistic indicators that could link stress with health. Yet there is a paucity of data speaking to their temporal features, particularly whether they behave in a more state- or trait-like manner across time. Methods To address this issue, data from 3 studies were used to assess CAR, diurnal slope and total daily output stability over different age groups and time spans: 130 healthy children and adolescents collected salivary cortisol samples 5 times/day (1, 4, 9 and 11 h after wake) over 2 days at 5 visits spaced 6 months apart (Study 1); 147 adolescent girls collected saliva 6 times/day (wake, 1, 4, 9 and 14 h after wake) for 2 days at 3 visits, each a year apart (Study 2); and 47 healthy, primarily middle age adults collected saliva 6 times/day (wake, 1, 4, 9 and 14 h after wake) for 3 days at 4 visits spaced 2–3 months apart (Study 3). Stability was estimated by multilevel model-derived intraclass correlation coefficients (ICCs). Results Across studies, approximately 50% of the variance in cortisol indices was attributable to day-to-day fluctuations, suggesting state-like properties. Of the indices, total daily output emerged as the most stable over time, followed by diurnal slope and CAR, but stability estimates were generally quite modest regardless of index and sample. Over time spans of >1 year, ICCs were ≤.13. Conclusions Most of the variance in CAR, diurnal slope and total daily output reflects day-to-day fluctuation; there was little evidence for more stable trait-like influences. These findings suggest that future research should focus on short-term fluctuations in stress, cortisol and health, as opposed to lengthy disease processes. PMID:24119668

Study the gradient characteristics of the ionosphere at equatorial latitude during the latest cycle of solar activity

NASA Astrophysics Data System (ADS)

Nguyen Thai, Chinh; Temitope Seun, Oluwadare; Le Thi, Nhung; Schuh, Harald

2017-04-01

The sun has its own seasons with an average duration of about 11 years. In this time, the sun enters a period of increased activity called the solar maximum and a period of decreased activity called the solar minimum. Cycles span from one minimum to the next. The current solar cycle is 24, which began on January 4, 2008 and is expected to be ended in 2019. During this period, the ionosphere changes its thickness and its characteristics as well. The change is most complicated and unpredictable at the equatorial latitudes in a band around 150 northward and 150 southward from the equator. Thailand is located in these regions is known as one of the countries most affected by the ionosphere change. Ionospheric information such as the vertical total electron content (VTEC) and scintillation indices can be extracted from the measurements of GNSS dual-frequency receivers. In this study, a Matlab tool is programmed to calculate some ionosphere parameters from the normal RINEX observation file including VTEC value, amplitude scintillation S4 index and others. The value of VTEC at one IGS station in Thailand (13.740N, 100.530E) is computed for almost one full solar cycle, that is 8 years, from 2009 to 2016. From these results, we are able to derive the rules of TEC variation over time and its dependence on solar activity in the equatorial regions. The change of VTEC is estimated in diurnal, seasonal and annual variation for the latest solar cycle. The solar cycle can be represented in several ways, in this paper we use the sunspot number and the F10.7 cm radio flux to describe the solar activity. The correlation coefficients between these solar indices and the monthly maximum of VTEC value are around 0.87, this indicates a high dependence of the ionosphere on solar activity. Besides, a scintillation map derived from GNSS data is displayed to indicate the intensity of scintillation activity.

Daily rhythms of locomotor and demand-feeding activities in Schizothorax pelzami (Kessler, 1870).

PubMed

Ebrahimi, Ehsan; Kamrani, Ehsan; Heydarnejad, Mohammad Saeed; Safari, Omid

2017-01-01

A study was carried out to investigate the daily rhythms of locomotor and feeding activity of Khajoo, Schizothorax pelzami, a candidate species for freshwater aquaculture. Using self-feeder juvenile Khajoo were exposed to a 12/12 LD cycle to determine the rhythms of locomotor and feeding activity. The effects of feeding on locomotor and feeding activity of fish were also examined. Finally, the endogenous rhythmicity under different lighting condition tested. Fish displayed a strictly diurnal feeding and locomotor activities with 98% and 84% of the total activity occurred in the photophase, respectively. In scheduled feeding, both the L-group (fed in light) and the D-group (fed in the dark) showed a diurnal locomotor activity pattern. However, the L-group had a peak of locomotor activity near the feeding time, but the D-group had a scarce locomotor activity in the scatophase with no significant change at the mealtime. Most of the individuals display free-running rhythms when exposed to different lighting condition including, constant darkness, ultradian 45:45 min LD cycle and reversed DL photo cycle. Taken together the results of this study showed that both locomotor and feeding activity have diurnal rhythms in Khajoo S. pelzami, even fish feeding had taken place at night. Additionally, the free-running locomotor activity of the fish in the absence of external light stimuli, suggests the existence of an endogenous timing mechanism in this fish species.

Developing a Data Record of Lower Troposphere Temperature Profiles for Diurnal Land-Atmosphere Coupling Investigations

NASA Astrophysics Data System (ADS)

Lin, Z.; Li, D.

2017-12-01

The lower troposphere, including the planetary boundary layer, is strongly influenced by the land surface at diurnal scales. However, investigations of diurnal land-atmosphere coupling are significantly hindered by the lack of profile measurements that resolve the diurnal cycle. This study aims to bridge this gap by developing a decade-long (from 2007 to 2016) data record of diurnal temperature profiles in the lower troposphere (from the surface to about 4 km above the surface), which is based on the Aircrafts Communications Addressing and Reporting System (ACARS) meteorological observations. We first identify the number of profiles within an hour for each airport over the CONUS. At each airport, only data that passed at least level-1 quality check are retained. 40 airports out of 275 are then selected, which have data for more than 12 hours per day. These selected airports are mainly located along the east and west coasts, as expected. Because the data are recorded at irregular heights, we resample each profile in the lowest 4 km or so to pre-defined vertical coordinates. These temperature profiles are further bias-corrected by comparing to collocated radiosonde observations. This consistent data record of diurnal temperature profiles in the lower troposphere can be also used for regional climatology research, short-term weather forecasts, and numerical model evaluation.

A wind energy benchmark for ABL modelling of a diurnal cycle with a nocturnal low-level jet: GABLS3 revisited

DOE PAGES

Rodrigo, J. Sanz; Churchfield, M.; Kosović, B.

2016-10-03

The third GEWEX Atmospheric Boundary Layer Studies (GABLS3) model intercomparison study, around the Cabauw met tower in the Netherlands, is revisited as a benchmark for wind energy atmospheric boundary layer (ABL) models. The case was originally developed by the boundary layer meteorology community, interested in analysing the performance of single-column and large-eddy simulation atmospheric models dealing with a diurnal cycle leading to the development of a nocturnal low-level jet. The case addresses fundamental questions related to the definition of the large-scale forcing, the interaction of the ABL with the surface and the evaluation of model results with observations. The characterizationmore » of mesoscale forcing for asynchronous microscale modelling of the ABL is discussed based on momentum budget analysis of WRF simulations. Then a single-column model is used to demonstrate the added value of incorporating different forcing mechanisms in microscale models. The simulations are evaluated in terms of wind energy quantities of interest.« less

Retrieval of the photochemical reflectance index for assessing xanthophyll cycle activity: a comparison of near-surface optical sensors

NASA Astrophysics Data System (ADS)

Harris, A.; Gamon, J.; Pastorello, G. Z.; Wong, C.

2014-08-01

Unattended optical sensors are increasingly being deployed on eddy covariance flux towers and are often used to complement existing vegetation and micrometeorological measurements to enable assessment of biophysical states and biogeochemical processes over a range of spatial scales. Of particular interest are sensors that can measure the photochemical reflectance index (PRI), which can provide information pertaining to leaf pigments and photosynthetic activity. This interest has facilitated the production of a new range of lower-cost sensors specifically designed to measure temporal changes in the PRI signal. However, little is known about the characteristics (spectral, radiometric and temporal) of many of these PRI sensors, making it difficult to compare data obtained from these sensors across time, geographical locations and instruments. Furthermore, direct testing of the capability of these sensors to actually detect the conversion of the xanthophyll cycle, which is the original biological basis of the PRI diurnal signal, is largely absent, which often results in an unclear interpretation of the signal, particularly given the wide range of factors now known to influence PRI. Through a series of experiments, we assess the sensitivity of one of the leading brands of PRI sensor (Skye SKR 1800) to changes in vegetation photosynthetic activity in response to changing irradiance. We compare the results with those obtained using a more expensive industry-standard spectrometer (PP-systems UniSpec) and determine the radiometric compatibility of measurements made by the different instruments. Results suggest that the lower cost SKR 1800 instrument is able to track rapid (seconds to minutes) and more gradual diurnal changes in photosynthetic activity associated with xanthophyll cycle pigment conversion. Measurements obtained from both the high and lower cost instrument were significantly linearly correlated but were subject to a large systematic bias, illustrating that

Influence of menarche on the relation between diurnal cortisol production and ventral striatum activity during reward anticipation.

PubMed

LeMoult, Joelle; Colich, Natalie L; Sherdell, Lindsey; Hamilton, J Paul; Gotlib, Ian H

2015-09-01

Adolescence is characterized by an increase in risk-taking and reward-seeking behaviors. In other populations, increased risk taking has been associated with tighter coupling between cortisol production and ventral striatum (VS) activation during reward anticipation; this relation has not yet been examined, however, as a function of adolescent development. This study examined the influence of pubertal development on the association between diurnal cortisol production and VS activity during reward anticipation. Pre- and post-menarcheal girls collected diurnal cortisol and completed an functional magnetic resonance imaging-based monetary incentive delay task, from which we extracted estimates of VS activity during the anticipation of reward, anticipation of loss and anticipation of non-incentive neutral trials. Post-menarcheal girls showed greater coupling between the cortisol awakening response and VS activation during anticipation of reward and loss than did their pre-menarcheal counterparts. Post-menarcheal girls did not differ from pre-menarcheal girls in their cortisol-VS coupling during anticipation of neutral trials, suggesting that puberty-related changes in cortisol-VS coupling are specific to affective stimuli. Interestingly, behavioral responses during the task indicate that post-menarcheal girls are faster to engage with affective stimuli than are pre-menarcheal girls. Thus, post-menarcheal girls exhibit neurobiological and behavioral patterns that have been associated with risk taking and that may underlie the dramatic increase in risk-taking behavior documented during adolescence. © The Author (2015). Published by Oxford University Press. For Permissions, please email: journals.permissions@oup.com.

Diurnal blood pressure changes.

PubMed

Asayama, Kei; Satoh, Michihiro; Kikuya, Masahiro

2018-05-23

The definition of diurnal blood pressure changes varies widely, which can be confusing. Short-term blood pressure variability during a 24-h period and the dipping status of diurnal blood pressure can be captured by ambulatory blood pressure monitoring, and these metrics are reported to have prognostic significance for cardiovascular complications. Morning blood pressure surge also indicates this risk, but its effect may be limited to populations with specific conditions. Meanwhile, the combined use of conventional office blood pressure and out-of-office blood pressure allows us to identify people with white-coat and masked hypertension. Current home devices can measure nocturnal blood pressure during sleep more conveniently than ambulatory monitoring; however, we should pay attention to blood pressure measurement conditions regardless of whether they are in a home, ambulatory, or office setting. The relatively poor reproducibility of diurnal blood pressure changes, including the nocturnal fall of blood pressure, is another underestimated issue to be addressed. Although information on diurnal blood pressure changes is expected to be used more effectively in the future, we should also keep in mind that blood pressure levels have remained central to the primary and secondary prevention of blood pressure-related cardiovascular diseases in clinical practice.

The Antarctic Krill Euphausia superba Shows Diurnal Cycles of Transcription under Natural Conditions

PubMed Central

Albiero, Alessandro; Sales, Gabriele; Millino, Caterina; Mazzotta, Gabriella M.; Bertolucci, Cristiano; Costa, Rodolfo

2013-01-01

Background Polar environments are characterized by extreme seasonal changes in day length, light intensity and spectrum, the extent of sea ice during the winter, and food availability. A key species of the Southern Ocean ecosystem, the Antarctic krill (Euphausia superba) has evolved rhythmic physiological and behavioral mechanisms to adapt to daily and seasonal changes. The molecular organization of the clockwork underlying these biological rhythms is, nevertheless, still only partially understood. Methodology/Principal Findings The genome sequence of the Antarctic krill is not yet available. A normalized cDNA library was produced and pyrosequenced in the attempt to identify large numbers of transcripts. All available E. superba sequences were then assembled to create the most complete existing oligonucleotide microarray platform with a total of 32,217 probes. Gene expression signatures of specimens collected in the Ross Sea at five different time points over a 24-hour cycle were defined, and 1,308 genes differentially expressed were identified. Of the corresponding transcripts, 609 showed a significant sinusoidal expression pattern; about 40% of these exibithed a 24-hour periodicity while the other 60% was characterized by a shorter (about 12-hour) rhythm. We assigned the differentially expressed genes to functional categories and noticed that those concerning translation, proteolysis, energy and metabolic process, redox regulation, visual transduction and stress response, which are most likely related to daily environmental changes, were significantly enriched. Two transcripts of peroxiredoxin, thought to represent the ancestral timekeeping system that evolved about 2.5 billion years ago, were also identified as were two isoforms of the EsRh1 opsin and two novel arrestin1 sequences involved in the visual transduction cascade. Conclusions Our work represents the first characterization of the krill diurnal transcriptome under natural conditions and provides a first

Diurnal cycle of air pollution in the Kathmandu Valley, Nepal: 2. Modeling results

NASA Astrophysics Data System (ADS)

Panday, Arnico K.; Prinn, Ronald G.; SchäR, Christoph

2009-11-01

After completing a 9-month field experiment studying air pollution and meteorology in the Kathmandu Valley, Nepal, we set up the mesoscale meteorological model MM5 to simulate the Kathmandu Valley's meteorology with a horizontal resolution of up to 1 km. After testing the model against available data, we used it to address specific questions to understand the factors that control the observed diurnal cycle of air pollution in this urban basin in the Himalayas. We studied the dynamics of the basin's nocturnal cold air pool, its dissipation in the morning, and the subsequent growth and decay of the mixed layer over the valley. During mornings, we found behavior common to large basins, with upslope flows and basin-center subsidence removing the nocturnal cold air pool. During afternoons the circulation in the Kathmandu Valley exhibited patterns common to plateaus, with cooler denser air originating over lower regions west of Kathmandu arriving through mountain passes and spreading across the basin floor, thereby reducing the mixed layer depth. We also examined the pathways of pollutant ventilation out of the valley. The bulk of the pollution ventilation takes place during the afternoon, when strong westerly winds blow in through the western passes of the valley, and the pollutants are rapidly carried out through passes on the east and south sides of the valley. In the evening, pollutants first accumulate near the surface, but then are lifted slightly when katabatic flows converge underneath. The elevated polluted layers are mixed back down in the morning, contributing to the morning pollution peak. Later in the morning a fraction of the valley's pollutants travels up the slopes of the valley rim mountains before the westerly winds begin.

Characterizing the Diurnal Cycle of Land Surface Temperature and Evapotranspiration at High Spatial Resolution Using Thermal Observations from sUAS.

NASA Astrophysics Data System (ADS)

Dutta, D.; Drewry, D.; Johnson, W. R.

2017-12-01

The surface temperature of plant canopies is an important indicator of the stomatal regulation of plant water use and the associated water flux from plants to atmosphere (evapotranspiration (ET)). Remotely sensed thermal observations using compact, low-cost, lightweight sensors from small unmanned aerial systems (sUAS) have the potential to provide surface temperature (ST) and ET estimates at unprecedented spatial and temporal resolutions, allowing us to characterize the intra-field diurnal variations in canopy ST and ET for a variety of vegetation systems. However, major challenges exist for obtaining accurate surface temperature estimates from low-cost uncooled microbolometer-type sensors. Here we describe the development of calibration methods using thermal chamber experiments, taking into account the ambient optics and sensor temperatures, and applying simple models of spatial non-uniformity correction to the sensor focal-plane-array. We present a framework that can be used to derive accurate surface temperatures using radiometric observations from low-cost sensors, and demonstrate this framework using a sUAS-mounted sensor across a diverse set of calibration and vegetation targets. Further, we demonstrate the use of the Surface Temperature Initiated Closure (STIC) model for computing spatially explicit, high spatial resolution ET estimates across several well-monitored agricultural systems, as driven by sUAS acquired surface temperatures. STIC provides a physically-based surface energy balance framework for the simultaneous retrieval of the surface and atmospheric vapor conductances and surface energy fluxes, by physically integrating radiometric surface temperature information into the Penman-Monteith equation. Results of our analysis over agricultural systems in Ames, IA and Davis, CA demonstrate the power of this approach for quantifying the intra-field spatial variability in the diurnal cycle of plant water use at sub-meter resolutions.

Simulating natural light and temperature cycles in the laboratory reveals differential effects on activity/rest rhythm of four Drosophilids.

PubMed

Prabhakaran, Priya M; Sheeba, Vasu

2014-10-01

Recent studies under semi-natural conditions have revealed various unique features of activity/rest rhythms in Drosophilids that differ from those under standard laboratory conditions. An additional afternoon peak (A-peak) has been reported for Drosophila melanogaster and another species D. malerkotliana while D. ananassae exhibited mostly unimodal diurnal activity. To tease apart the role of light and temperature in mediating these species-specific behaviours of four Drosophilid species D. melanogaster, D. malerkotliana, D. ananassae, and Zaprionus indianus we simulated gradual natural light and/or temperature cycles conditions in laboratory. The pattern observed under semi-natural conditions could be reproduced in the laboratory for all the species under a variety of simulated conditions. D. melanogaster and D. malerkotliana showed similar patterns where as D. ananassae consistently exhibited predominant morning activity under almost all regimes. Z. indianus showed clearly rhythmic activity mostly when temperature cycles were provided. We find that gradually changing light intensities reaching a sufficiently high peak value can elicit A-peak in D. melanogaster, D. malerkotliana, and D. ananassae even at mild ambient temperature. Furthermore, we show that high mid-day temperature could induce A-peak in all species even under constant light conditions suggesting that this A-peak is likely to be a stress response.

Diurnal warming impacts on atmospheric and oceanic evolution during the suppressed phase of the Madden Julian Oscillation

NASA Astrophysics Data System (ADS)

Clayson, C. A.; Roberts, J.

2016-02-01

The Madden-Julian Oscillation (MJO) represents a prominent mode of intraseasonal tropical variability as manifest by coherent large-scale changes in atmospheric circulation, convection, and thermodynamic processes. Its impacts are far-reaching with influences on monsoons, flooding, droughts, and tropical storms. The characteristic timescale of the MJO is positioned in a gap between synoptic forecasting and longer range seasonal to interannual predictions, but has been shown to be dependent on diurnally-varying sea surface temperature (SST). In this work, we leverage a wide suite of satellite products with in situ oceanographic data over the 2002-2012 period to investigate the rectification effects of strong ocean diurnal warming onto the development of intraseasonal SST variability, and whether there a detectable influence on the diurnal cycle of cloud-radiative effects in the suppressed phase of the MJO. Diurnally-varying SST is used as a conditional sampling parameter, along with AIRS/AMSU-A temperature and moisture profiles, surface winds, radiative and turbulent surface fluxes, and precipitation. We use composite daily average atmospheric BL depths, changes in lower-tropospheric stability, and moist static energy to evaluate changes in convective inhibition based on the diurnal variability of surface parcel characteristics due to turbulent heat fluxes, and compare with diurnal changes in cloud-radiative effects and precipitation. Argo floats and ocean modeling experiments are used to examine the upper ocean response. An ensemble of MJO simulations are generated using Argo profiles and satellite-derived surface forcing from which the systematic impacts of diurnal variability on the generation of the intraseasonal SST warming are evaluated. These simulations inform the importance of diurnal variations in surface boundary forcing to upper ocean mixing and the integrated contribution to SST warming over the typical duration of a suppressed phase of the MJO.

Diurnal variations in metal concentrations in the Alamosa River and Wightman Fork, southwestern Colorado, 1995-97

USGS Publications Warehouse

Ortiz, Roderick F.; Stogner, Sr., Robert W.

2001-01-01

A comprehensive sampling network was implemented in the Alamosa River Basin from 1995 to 1997 to address data gaps identified as part of the ecological risk assessment of the Summitville Superfund site. Aluminum, copper, iron, and zinc were identified as the constituents of concern for the risk assessment. Water-quality samples were collected at six sites on the Alamosa River and Wightman Fork by automatic samplers. Several discrete (instantaneous) samples were collected over 24 hours at each site during periods of high diurnal variations in streamflow (May through September). The discrete samples were analyzed individually and duplicate samples were composited to produce a single sample that represented the daily-mean concentration. The diurnal variations in concentration with respect to the theoretical daily-mean concentration (maximum minus minimum divided by daily mean) are presented. Diurnal metal concentrations were highly variable in the Alamosa River and Wightman Fork. The concentration of a metal at a single site could change by several hundred percent during one diurnal cycle. The largest percent change in metal concentrations was observed for aluminum and iron. Zinc concentrations varied the least of the four metals. No discernible or predictable pattern was indicated in the timing of the daily mean, maximum, or minimum concentrations. The percentage of discrete sample concentrations that varied from the daily-mean concentration by thresholds of plus or minus 10, 25, and 50 percent was evaluated. Between 50 and 75 percent of discrete-sample concentrations varied from the daily-mean concentration by more than plus or minus 10 percent. The percentage of samples exceeding given thresholds generally was smaller during the summer period than the snowmelt period. Sampling strategies are critical to accurately define variability in constituent concentration, and conversely, understanding constituent variability is important in determining appropriate sampling

Diurnal changes in epidermal UV transmittance of plants in naturally high UV environments.

PubMed

Barnes, Paul W; Flint, Stephan D; Slusser, James R; Gao, Wei; Ryel, Ronald J

2008-06-01

Studies were conducted on three herbaceous plant species growing in naturally high solar UV environments in the subalpine of Mauna Kea, Hawaii, USA, to determine if diurnal changes in epidermal UV transmittance (T(UV)) occur in these species, and to test whether manipulation of the solar radiation regime could alter these diurnal patterns. Additional field studies were conducted at Logan, Utah, USA, to determine if solar UV was causing diurnal T(UV) changes and to evaluate the relationship between diurnal changes in T(UV) and UV-absorbing pigments. Under clear skies, T(UV), as measured with a UV-A-pulse amplitude modulation fluorometer for leaves of Verbascum thapsus and Oenothera stricta growing in native soils and Vicia faba growing in pots, was highest at predawn and sunset and lowest at midday. These patterns in T(UV) closely tracked diurnal changes in solar radiation and were the result of correlated changes in fluorescence induced by UV-A and blue radiation but not photochemical efficiency (F(v)/F(m)) or initial fluorescence yield (F(o)). The magnitude of the midday reduction in T(UV) was greater for young leaves than for older leaves of Verbascum. Imposition of artificial shade eliminated the diurnal changes in T(UV) in Verbascum, but reduction in solar UV had no effect on diurnal T(UV) changes in Vicia. In Vicia, the diurnal changes in T(UV) occurred without detectable changes in the concentration of whole-leaf UV-absorbing compounds. Results suggest that plants actively control diurnal changes in UV shielding, and these changes occur in response to signals other than solar UV; however, the underlying mechanisms responsible for rapid changes in T(UV) remain unclear.

Does high diurnal variability in a reef flat from Ofu, American Samoa confer resistance to ocean acidification?

NASA Astrophysics Data System (ADS)

Koweek, D.; Samuel, L.; Mucciarone, D. A.; Woodson, C. B.; Monismith, S. G.; Dunbar, R. B.

2012-12-01

Forecasts for coral reefs under various ocean acidification scenarios are becoming increasingly complex due to significant inter-site variability in biogeochemistry, ecology, and physical oceanography. The reef flats of Ofu, American Samoa are a potential end-member of this vulnerability spectrum due to extremely high diurnal variability in their biogeochemistry. Here we present coupled biogeochemical and physical oceanographic measurements from a shallow reef flat on Ofu in November 2011. We observed diurnal temperature ranges of up to 7°C, along with diurnal pH and dissolved oxygen ranges of 0.6 units, and 160 percent of saturation, respectively. Carbon system measurements were less extreme. Alkalinity varied between 2240-2360 μmol/kg and total dissolved inorganic carbon (TDIC) ranged between 1850-2100 μmol/kg during the diurnal cycle. These observations suggest diurnal ranges of ~240ppm CO2 and 1.5 units of ΩAr. The larger diurnal range in TDIC relative to alkalinity suggests a reef environment dominated by photosynthesis. From these observations, we explore the balance between the dominant biogeochemical processes of production and calcification on the reef flat in more detail, along with its implication for conferring resistance to ocean acidification. We use calcification rate estimates to provide insight to patterns of day and night growth and/or dissolution on the reef. Finally, we present evidence of tidal modulation of the biogeochemical signals and discuss the role of localized physical circulation in helping to determine a reef's vulnerability to ocean acidification.

Diurnal variations of Titan

NASA Astrophysics Data System (ADS)

Cui, J.; Galand, M.; Yelle, R. V.; Vuitton, V.; Wahlund, J.-E.; Lavvas, P. P.; Mueller-Wodarg, I. C. F.; Kasprzak, W. T.; Waite, J. H.

2009-04-01

We present our analysis of the diurnal variations of Titan's ionosphere (between 1,000 and 1,400 km) based on a sample of Ion Neutral Mass Spectrometer (INMS) measurements in the Open Source Ion (OSI) mode obtained from 8 close encounters of the Cassini spacecraft with Titan. Though there is an overall ion depletion well beyond the terminator, the ion content on Titan's nightside is still appreciable, with a density plateau of ~700 cm-3 below ~1,300 km. Such a plateau is associated with the combination of distinct diurnal variations of light and heavy ions. Light ions (e.g. CH5+, HCNH+, C2H5+) show strong diurnal variation, with clear bite-outs in their nightside distributions. In contrast, heavy ions (e.g. c-C3H3+, C2H3CNH+, C6H7+) present modest diurnal variation, with significant densities observed on the nightside. We propose that the distinctions between light and heavy ions are associated with their different chemical loss pathways, with the former primarily through "fast" ion-neutral chemistry and the latter through "slow" electron dissociative recombination. The INMS data suggest day-to-night transport as an important source of ions on Titan's nightside, to be distinguished from the conventional scenario of auroral ionization by magnetospheric particles as the only ionizing source on the nightside. This is supported by the strong correlation between the observed night-to-day ion density ratios and the associated ion lifetimes. We construct a time-dependent ion chemistry model to investigate the effects of day-to-night transport on the ionospheric structures of Titan. The predicted diurnal variation has similar general characteristics to those observed, with some apparent discrepancies which could be reconciled by imposing fast horizontal thermal winds in Titan's upper atmosphere.

Arvicanthis ansorgei, a Novel Model for the Study of Sleep and Waking in Diurnal Rodents

PubMed Central

Hubbard, Jeffrey; Ruppert, Elisabeth; Calvel, Laurent; Robin-Choteau, Ludivine; Gropp, Claire-Marie; Allemann, Caroline; Reibel, Sophie; Sage-Ciocca, Dominique; Bourgin, Patrice

2015-01-01

Study Objectives: Sleep neurobiology studies use nocturnal species, mainly rats and mice. However, because their daily sleep/wake organization is inverted as compared to humans, a diurnal model for sleep studies is needed. To fill this gap, we phenotyped sleep and waking in Arvicanthis ansorgei, a diurnal rodent widely used for the study of circadian rhythms. Design: Video-electroencephalogram (EEG), electromyogram (EMG), and electrooculogram (EOG) recordings. Setting: Rodent sleep laboratory. Participants: Fourteen male Arvicanthis ansorgei, aged 3 mo. Interventions: 12 h light (L):12 h dark (D) baseline condition, 24-h constant darkness, 6-h sleep deprivation. Measurements and Results: Wake and rapid eye movement (REM) sleep showed similar electrophysiological characteristics as nocturnal rodents. On average, animals spent 12.9 h ± 0.4 awake per 24-h cycle, of which 6.88 h ± 0.3 was during the light period. NREM sleep accounted for 9.63 h ± 0.4, which of 5.13 h ± 0.2 during dark period, and REM sleep for 89.9 min ± 6.7, which of 52.8 min ± 4.4 during dark period. The time-course of sleep and waking across the 12 h light:12 h dark was overall inverted to that observed in rats or mice, though with larger amounts of crepuscular activity at light and dark transitions. A dominant crepuscular regulation of sleep and waking persisted under constant darkness, showing the lack of a strong circadian drive in the absence of clock reinforcement by external cues, such as a running wheel. Conservation of the homeostatic regulation was confirmed with the observation of higher delta power following sustained waking periods and a 6-h sleep deprivation, with subsequent decrease during recovery sleep. Conclusions: Arvicanthis ansorgei is a valid diurnal rodent model for studying the regulatory mechanisms of sleep and so represents a valuable tool for further understanding the nocturnality/diurnality switch. Citation: Hubbard J, Ruppert E, Calvel L, Robin-Choteau L, Gropp CM

Diurnal rhythm of melatonin binding in the rat suprachiasmatic nucleus

DOE Office of Scientific and Technical Information (OSTI.GOV)

Laitinen, J.T.; Castren, E.; Vakkuri, O.

1989-03-01

We used quantitative in vitro autoradiography to localize and characterize 2-/sup 125/I-melatonin binding sites in the rat suprachiasmatic nuclei in relation to pineal melatonin production. In a light:dark cycle of 12:12 h, binding density exhibited significant diurnal variation with a peak at the dark-light transition and a trough 12 hours later. Saturation studies suggested that the decreased binding at light-dark transition might be due to a shift of the putative melatonin receptor to a low affinity state.

Diurnal variations of vegetation canopy structure

NASA Technical Reports Server (NTRS)

Kimes, D. S.; Kirchner, J. A.

1983-01-01

The significance and magnitude of diurnal variations of vegetation canopy structure are reviewed. Diurnal leaf inclination-azimuth angle distributions of a soybean and cotton canopy were documented using a simple measurement technique. The precision of the measurements was on the order of + or -5 deg for the inclination and + or -14 deg for the azimuth. The experimental results and a review of the literature showed that this distribution can vary significantly on a diurnal basis due to vegetation type, heliotropic leaf movement, environmental conditions, and vegetation stress. The study also showed that it is erroneous to treat two separate distributions of azimuth and inclination angles rather than one three-dimensional distribution of leaf orientation. The latter distribution needs to be routinely collected in studies which document variations of diurnal spectral reflectance with changes in solar zenith angle.

Diurnal Reflectance Changes in Vegetation Observed with AVIRIS

NASA Technical Reports Server (NTRS)

Vanderbilt, V. C.; Ambrosia, V. G.; Ustin, S. L.

1998-01-01

Among the most important short-term dynamic biological processes are diurnal changes in canopy water relations. Plant regulation of water transport through stomatal openings affects other gaseous transport processes, often dramatically decreasing photosynthetic fixation of carbon dioxide during periods of water stress. Water stress reduces stomatal conductance of water vapor through the leaf surface and alters the diurnal timing of stomatal opening. Under non-water stressed conditions, stomates typically open soon after dawn and transpire water vapor throughout the daylight period. During stress periods, stomates may close for part of the day, generally near mid-day. Under prolonged stress conditions, stomatal closure shifts to earlier times during the day; stomates may close by mid-morning and remain closed until the following morning - or remain closed entirely. Under these conditions the relationship between canopy greenness (e.g., measured with a vegetation index or by spectral mixture analysis) and photosynthetic fixation of carbon is lost and the remotely sensed vegetation metric is a poor predictor of gas exchange. Prediction of stomatal regulation and exchange of water and trace gases is critical for ecosystem and climate models to correctly estimate budgets of these gases and understand or predict other processes like gross and net ecosystem primary production. Plant gas exchange has been extensively studied by physiologists at the leaf and whole plant level and by biometeorologists at somewhat larger scales. While these energy driven processes follow a predictable if somewhat asymmetric diurnal cycle dependent on soil water availability and the constraints imposed by the solar energy budget, they are nonetheless difficult to measure at the tree and stand levels using conventional methods. Ecologists have long been interested in the potential of remote sensing for monitoring physiological changes using multi-temporal images. Much of this research has

Resynchronization of circadian sleep-wake and temperature cycles in the squirrel monkey following phase shifts of the environmental light-dark cycle

NASA Technical Reports Server (NTRS)

Wexler, D. B.; Moore-Ede, M. C.

1986-01-01

Circadian rhythms in physiological and behavioral functions gradually resynchronize after phase shifts in environmental time cues. In order to characterize the rate of circadian resynchronization in a diurnal primate model, the temperature, locomotor activity, and polygraphically determined sleep-wake states were monitored in squirrel monkeys before and after 8-h phase shifts of an environmental light-dark cycle of 12 h light and 12 h dark (LD 12:12). For the temperature rhythm, resynchronization took 4 d after phase delay shift and 5 d after phase advance shift; for the rest-activity cycle, resynchronization times were 3 d and 6 d, respectively. The activity acrophase shifted more rapidly than the temperature acrophase early in the post-delay shift interval, but this internal desynchronization between rhythms disappeared during the course of resynchronization. Further study of the early resynchronization process requires emphasis on identifying evoked effects and measuring circadian pacemaker function.

On the influence of the diurnal variations of aerosol content to estimate direct aerosol radiative forcing using MODIS data

NASA Astrophysics Data System (ADS)

Xu, Hui; Guo, Jianping; Ceamanos, Xavier; Roujean, Jean-Louis; Min, Min; Carrer, Dominique

2016-09-01

Long-term measurements of aerosol optical depth (AOD) from the Aerosol Robotic Network (AERONET) located in Beijing reveal a strong diurnal cycle of aerosol load staged by seasonal patterns. Such pronounced variability is matter of importance in respect to the estimation of daily averaged direct aerosol radiative forcing (DARF). Polar-orbiting satellites could only offer a daily revisit, which turns in fact to be even much less in case of frequent cloudiness. Indeed, this places a severe limit to properly capture the diurnal variations of AOD and thus estimate daily DARF. Bearing this in mind, the objective of the present study is however to evaluate the impact of AOD diurnal variations for conducting quantitative assessment of DARF using Moderate Resolution Imaging Spectroradiometer (MODIS) AOD data over Beijing. We provide assessments of DARF with two different assumptions about diurnal AOD variability: taking the observed hourly-averaged AOD cycle into account and assuming constant MODIS (including Terra and Aqua) AOD value throughout the daytime. Due to the AOD diurnal variability, the absolute differences in annual daily mean DARFs, if the constant MODIS/Terra (MODIS/Aqua) AOD value is used instead of accounting for the observed hourly-averaged daily variability, is 1.2 (1.3) Wm-2 at the top of the atmosphere, 27.5 (30.6) Wm-2 at the surface, and 26.4 (29.3) Wm-2 in the atmosphere, respectively. During the summertime, the impact of the diurnal AOD variability on seasonal daily mean DARF estimates using MODIS Terra (Aqua) data can reach up to 2.2 (3.9) Wm-2 at the top of the atmosphere, 43.7 (72.7) Wm-2 at the surface, and 41.4 (68.8) Wm-2 in the atmosphere, respectively. Overall, the diurnal variation in AOD tends to cause large bias in the estimated DARF on both seasonal and annual scales. In summertime, the higher the surface albedo, the stronger impact on DARF at the top of the atmosphere caused by dust and biomass burning (continental) aerosol. This

Diurnal variation of tropospheric relative humidity in tropical regions

NASA Astrophysics Data System (ADS)

Moradi, Isaac; Arkin, Philip; Ferraro, Ralph; Eriksson, Patrick; Fetzer, Eric

2016-06-01

regions where the diurnal peak occurs at other times of the day. The early morning peak time is because of a peak in convective activities in early morning. Additionally, a double peak was observed in tropospheric humidity over some regions which is consistent with double peak in precipitation.

Reproductive biology of Echinopsis terscheckii (Cactaceae): the role of nocturnal and diurnal pollinators.

PubMed

Ortega-Baes, P; Saravia, M; Sühring, S; Godínez-Alvarez, H; Zamar, M

2011-01-01

The aim of this study was to analyse the reproductive biology of Echinopsis terscheckii, a species endemic to northwest Argentina that has nocturnal flowers. We expected that this species had a generalised pollination system, with moths and diurnal visitors as the primary pollinators. To test this, we studied the floral biology, breeding system and floral visitors of this species and the effectiveness of nocturnal and diurnal visitors. Floral biology was defined based on floral morphology, floral cycle and nectar production of the flowers. The breeding system and relative contributions of diurnal and nocturnal visitors to fruit and seed set were analysed through field experiments. E. terscheckii flowers opened at sunset and closed the following day. The peak of nectar production occurred at midnight. Flowers were determined to be self-incompatible. Moths, bees and birds were identified as floral visitors. Moths were the most frequent visitors at night, whereas bees were the most frequent visitors during the day. Fruit production by diurnal pollinators was less than that by nocturnal pollinators; among all floral visitors, moths were the most effective pollinators. We have demonstrated for the first time that moths are the primary pollinators of columnar cacti of the genus Echinopsis. Our results suggest that moths might be important pollinators of columnar cactus species with nocturnal flowers in the extra-tropical deserts of South America. © 2010 German Botanical Society and The Royal Botanical Society of the Netherlands.

The Cloud Top Distribution and Diurnal Variation of Clouds Over East Asia: Preliminary Results From Advanced Himawari Imager

NASA Astrophysics Data System (ADS)

Chen, Dandan; Guo, Jianping; Wang, Hongqing; Li, Jian; Min, Min; Zhao, Wenhui; Yao, Dan

2018-04-01

Clouds, as one of the most uncertain factors in climate system, have been intensively studied as satellites with advanced instruments emerged in recent years. However, few studies examine the vertical distributions of cloud top and their temporal variations over East Asia based on geostationary satellite data. In this study, the vertical structures of cloud top and its diurnal variations in summer of 2016 are analyzed using the Advanced Himawari Imager/Himawari-8 cloud products. Results show that clouds occur most frequently over the southern Tibetan Plateau and the Bay of Bengal. We find a steep gradient of cloud occurrence frequency extending from southwest to northeast China and low-value centers over the eastern Pacific and the Inner Mongolia Plateau. The vertical structures of cloud top are highly dependent on latitude, in addition to the nonnegligible roles of both terrain and land-sea thermal contrast. In terms of the diurnal cycle, clouds tend to occur more often in the afternoon, peaking around 1700 local time over land and ocean. The amplitude of cloud diurnal variation over ocean is much smaller than that over land, and complex terrain tends to be linked to larger amplitude. In vertical, the diurnal cycle of cloud frequency exhibits bimodal pattern over both land and ocean. The high-level peaks occur at almost the same altitude over land and ocean. In contrast, the low-level peaks over ocean mainly reside in the boundary layer, much lower than those over land, which could be indicative of the frequent occurrence of marine boundary layer clouds.

QBO Generated Inter-annual Variations of the Diurnal Tide in the Mesosphere

NASA Technical Reports Server (NTRS)

Mayr, Hans G.; Mengel, John G.

2004-01-01

We report results from a study with the Numerical Spectral Model (NSM), which produces in the mesosphere significant inter-annual variations in the diurnal tide. Applying Hines Doppler Spread Parameterization (DPS), small-scale gravity waves (GW) drive the Quasi-biennial Oscillation (QBO) and Semi-annual Oscillation (SAO). With a GW source that peaks at the equator and is taken to be isotropic and independent of season, the NSM generates near the equator a QBO with variable periods around 27 months and zonal wind amplitudes close to 20 m / s at 30 Ism. As reported earlier, the NSM reproduces the observed equinoctial maxima in the diurnal tide at altitudes around 95 km. In the present paper it is shown that the QBO modulates the tide such that the seasonal amplitude maxima can vary from one year to another by as much as 30%. Since the period of the QBO is variable, its phase relative to the seasonal cycle changes. The magnitude of the QBO modulation of the tide thus varies considerably as our long-term model simulation shows. To shed light on the underlying mechanism, the relative importance of the linearized advection terms are discussed that involve the meridional and vertical winds of the diurnal tide.

Temperature Variation under Continuous Light Restores Tomato Leaf Photosynthesis and Maintains the Diurnal Pattern in Stomatal Conductance

PubMed Central

Haque, Mohammad S.; de Sousa, Alexandra; Soares, Cristiano; Kjaer, Katrine H.; Fidalgo, Fernanda; Rosenqvist, Eva; Ottosen, Carl-Otto

2017-01-01

The response of tomato plants (Solanum lycopersicum L. cv. Aromata) to continuous light (CL) in relation to photosynthesis, abscisic acid (ABA) and reactive oxygen species (ROS) was investigated to improve the understanding of the development and/or alleviation of CL-induced leaf injury in constant and diurnal temperature fluctuations with similar daily light integral and daily mean temperature. The plants were grown in three photoperiodic treatments for 15 days; One treatment with a 16/8 h light/dark period and a light/dark temperature of 27/17°C (Control), two CL treatments with 24 h photoperiods, one with a constant temperature of 24°C (CLCT) and the other one with variable temperature of 27/17°C for 16/8 ho, respectively (CLVT). A diurnal pattern of stomatal conductance (gs) and [ABA] was observed in the plants grown in the control and CLVT conditions, while the plants in CLCT conditions experienced a significant decrease in stomatal conductance aligned with an increase in ABA. The net photosynthesis (A) was significantly reduced in CLCT, aligned with a significant decrease in the maximum rate of Rubisco carboxylation (Vcmax), the maximum rate of electron transport (Jmax) and mesophyll diffusion conductance to CO2 (gm) in comparison to the control and CLVT. An increased production of H2O2 and O2•- linked with increased activities of antioxidative enzymes was seen in both CL treatments, but despite of this, leaf injuries were only observed in the CLCT treatment. The results suggest that the diurnal temperature fluctuations alleviated the CL injury symptoms, probably because the diurnal cycles of cellular mechanisms were maintained. The ROS were shown not to be directly involved in CL-induced leaf injury, since both ROS production and scavenging was highest in CLVT without leaf chlorotic symptoms. PMID:28979273

Sex hormones adjust "sex-specific" reactive and diurnal cortisol profiles.

PubMed

Juster, Robert-Paul; Raymond, Catherine; Desrochers, Alexandra Bisson; Bourdon, Olivier; Durand, Nadia; Wan, Nathalie; Pruessner, Jens C; Lupien, Sonia J

2016-01-01

Sex differences in stress hormone functions are presumed to depend on sex hormones. And yet, surprisingly few psychoneuroendocrine studies actually assess within-sex variations of testosterone, estradiol, and progesterone when investigating sex-specific activities of the hypothalamic-pituitary-adrenal axis. In this methodological study of 204 healthy adults (60 men), we assessed whether cortisol profiles would differ between the sexes when unadjusted or adjusted for basal sex hormones among both sexes. Reactive cortisol was sampled using 6 saliva samples measured every 10-min as part of the Trier Social Stress Test that generally activates cortisol among men more than women. Diurnal cortisol was sampled over two days at (1) awakening, (2) 30-min thereafter, (3) 1400 h, (4) 1600 h, and (5) bedtime. Sex hormones were collected at baseline before the psychosocial stressor and on two occasions during diurnal cortisol assessment. Repeated-measures analysis of covariance controlled for key covariates in analyses unadjusted or adjusted for sex hormones. Results revealed that men had higher reactive cortisol than women in unadjusted analysis, but this sex difference was attenuated when adjusting for sex hormones. While diurnal cortisol showed no sex differences in unadjusted models, adjusting for sex hormones revealed that women have higher morning cortisol. Correlations using area under the curve formulae revealed intriguing sex-specific associations with progesterone in men and testosterone in women that we propose have implications for social and affective neuroscience. In summary, our results reveal that adjusting for sex hormones alters "sex-specific" reactive and diurnal cortisol profiles. Copyright © 2015 Elsevier Ltd. All rights reserved.

The diurnal interaction between convection and peninsular-scale forcing over South Florida

NASA Technical Reports Server (NTRS)

Cooper, H. J.; Simpson, J.; Garstang, M.

1982-01-01

One of the outstanding problems in modern meterology is that of describing in detail the manner in which larger scales of motion interact with, influence and are influenced by successively smaller scales of motion. The present investigation is concerned with a study of the diurnal evolution of convection, the interaction between the peninsular-scale convergence and convection, and the role of the feedback produced by the cloud-scale downdrafts in the maintenance of the convection. Attention is given to the analysis, the diurnal cycle of the network area-averaged divergence, convective-scale divergence, convective mass transports, and the peninsular scale divergence. The links established in the investigation between the large scale (peninsular), the mesoscale (network), and the convective scale (cloud) are found to be of fundamental importance to the understanding of the initiation, maintenance, and decay of deep precipitating convection and to its theoretical parameterization.

Too hot to die? The effects of vegetation shading on past, present, and future activity budgets of two diurnal skinks from arid Australia.

PubMed

Grimm-Seyfarth, Annegret; Mihoub, Jean-Baptiste; Henle, Klaus

2017-09-01

Behavioral thermoregulation is an important mechanism allowing ectotherms to respond to thermal variations. Its efficiency might become imperative for securing activity budgets under future climate change. For diurnal lizards, thermal microhabitat variability appears to be of high importance, especially in hot deserts where vegetation is highly scattered and sensitive to climatic fluctuations. We investigated the effects of a shading gradient from vegetation on body temperatures and activity timing for two diurnal, terrestrial desert lizards, Ctenotus regius, and Morethia boulengeri , and analyzed their changes under past, present, and future climatic conditions. Both species' body temperatures and activity timing strongly depended on the shading gradient provided by vegetation heterogeneity. At high temperatures, shaded locations provided cooling temperatures and increased diurnal activity. Conversely, bushes also buffered cold temperature by saving heat. According to future climate change scenarios, cooler microhabitats might become beneficial to warm-adapted species, such as C. regius, by increasing the duration of daily activity. Contrarily, warmer microhabitats might become unsuitable for less warm-adapted species such as M. boulengeri for which midsummers might result in a complete restriction of activity irrespective of vegetation. However, total annual activity would still increase provided that individuals would be able to shift their seasonal timing towards spring and autumn. Overall, we highlight the critical importance of thermoregulatory behavior to buffer temperatures and its dependence on vegetation heterogeneity. Whereas studies often neglect ecological processes when anticipating species' responses to future climate change the strongest impact of a changing climate on terrestrial ectotherms in hot deserts is likely to be the loss of shaded microhabitats rather than the rise in temperature itself. We argue that conservation strategies aiming at

Seasonal and diurnal patterns in the dispersion of SO2 from Mt. Nyiragongo

NASA Astrophysics Data System (ADS)

Dingwell, Adam; Rutgersson, Anna; Claremar, Björn; Arellano, Santiago; Yalire, Mathieu M.; Galle, Bo

2016-05-01

Mt. Nyiragongo is an active volcano located in the Democratic Republic of Congo, close to the border of Rwanda and about 15 km north of the city of Goma (∼ 1,000,000 inhabitants). Gases emitted from Nyiragongo might pose a persistent hazard to local inhabitants and the environment. While both ground- and satellite-based observations of the emissions exist, prior to this study, no detailed analysis of the dispersion of the emissions have been made. We have conducted a dispersion study, using a modelling system to determine the geographical distribution of SO2. A combination of a meteorological model (WRF), a Lagrangian particle dispersion model (FLEXPART-WRF) and flux data based on DOAS measurements from the NOVAC-network is used. Since observations can only be made during the day, we use random sampling of fluxes and ensemble modelling to estimate night-time emissions. Seasonal variations in the dispersion follows the migration of the Inter Tropical Convergence Zone. In June-August, the area with the highest surface concentrations is located to the northwest, and in December-February, to the southwest of the source. Diurnal variations in surface concentrations were determined by the development of the planetary boundary layer and the lake-/land breeze cycle around lake Kivu. Both processes contribute to low surface concentrations during the day and high concentrations during the night. However, the strong northerly trade winds in November-March weakened the lake breeze, contributing to higher daytime surface concentrations along the northern shore of Lake Kivu, including the city of Goma. For further analysis and measurements, it is important to include both seasonal and diurnal cycles in order to safely cover periods of high and potentially hazardous concentrations.

Timing the tides: Genetic control of diurnal and lunar emergence times is correlated in the marine midge Clunio marinus

PubMed Central

2011-01-01

Background The intertidal zone of seacoasts, being affected by the superimposed tidal, diurnal and lunar cycles, is temporally the most complex environment on earth. Many marine organisms exhibit lunar rhythms in reproductive behaviour and some show experimental evidence of endogenous control by a circalunar clock, the molecular and genetic basis of which is unexplored. We examined the genetic control of lunar and diurnal rhythmicity in the marine midge Clunio marinus (Chironomidae, Diptera), a species for which the correct timing of adult emergence is critical in natural populations. Results We crossed two strains of Clunio marinus that differ in the timing of the diurnal and lunar rhythms of emergence. The phenotype distribution of the segregating backcross progeny indicates polygenic control of the lunar emergence rhythm. Diurnal timing of emergence is also under genetic control, and is influenced by two unlinked genes with major effects. Furthermore, the lunar and diurnal timing of emergence is correlated in the backcross generation. We show that both the lunar emergence time and its correlation to the diurnal emergence time are adaptive for the species in its natural environment. Conclusions The correlation implies that the unlinked genes affecting lunar timing and the two unlinked genes affecting diurnal timing could be the same, providing an unexpectedly close interaction of the two clocks. Alternatively, the genes could be genetically linked in a two-by-two fashion, suggesting that evolution has shaped the genetic architecture to stabilize adaptive combinations of lunar and diurnal emergence times by tightening linkage. Our results, the first on genetic control of lunar rhythms, offer a new perspective to explore their molecular clockwork. PMID:21599938

Timing the tides: genetic control of diurnal and lunar emergence times is correlated in the marine midge Clunio marinus.

PubMed

Kaiser, Tobias S; Neumann, Dietrich; Heckel, David G

2011-05-20

The intertidal zone of seacoasts, being affected by the superimposed tidal, diurnal and lunar cycles, is temporally the most complex environment on earth. Many marine organisms exhibit lunar rhythms in reproductive behaviour and some show experimental evidence of endogenous control by a circalunar clock, the molecular and genetic basis of which is unexplored. We examined the genetic control of lunar and diurnal rhythmicity in the marine midge Clunio marinus (Chironomidae, Diptera), a species for which the correct timing of adult emergence is critical in natural populations. We crossed two strains of Clunio marinus that differ in the timing of the diurnal and lunar rhythms of emergence. The phenotype distribution of the segregating backcross progeny indicates polygenic control of the lunar emergence rhythm. Diurnal timing of emergence is also under genetic control, and is influenced by two unlinked genes with major effects. Furthermore, the lunar and diurnal timing of emergence is correlated in the backcross generation. We show that both the lunar emergence time and its correlation to the diurnal emergence time are adaptive for the species in its natural environment. The correlation implies that the unlinked genes affecting lunar timing and the two unlinked genes affecting diurnal timing could be the same, providing an unexpectedly close interaction of the two clocks. Alternatively, the genes could be genetically linked in a two-by-two fashion, suggesting that evolution has shaped the genetic architecture to stabilize adaptive combinations of lunar and diurnal emergence times by tightening linkage. Our results, the first on genetic control of lunar rhythms, offer a new perspective to explore their molecular clockwork.

Raman Lidar Profiling of Aerosols Over the Central US; Diurnal Variability and Comparisons with the GOCART Model

NASA Technical Reports Server (NTRS)

Ferrare, R. A.; Chin, M.; Clayton, M.; Turner, D.

2002-01-01

We use profiles of aerosol extinction, water vapor mixing ratio, and relative humidity measured by the ARM SGP Raman lidar in northern Oklahoma to show how the vertical distributions of aerosol extinction and water vapor vary throughout the diurnal cycle. While significant (20-30%) variations in aerosol extinction occurred near the surface as well as aloft, smaller (approximately 10%) variations were observed in the diurnal variability of aerosol optical thickness (AOT). The diurnal variations in aerosol extinction profiles are well correlated with corresponding variations in the average relative humidity profiles. The water vapor mixing ratio profiles and integrated water vapor amounts generally show less diurnal variability. The Raman lidar profiles are also used to evaluate the aerosol optical thickness and aerosol extinction profiles simulated by the GOCART global aerosol model. Initial comparisons show that the AOT simulated by GOCART was in closer agreement with the AOT derived from the Raman lidar and Sun photometer measurements during November 2000 than during September 2000. For both months, the vertical variability in average aerosol extinction profiles simulated by GOCART is less than the variability in the corresponding Raman lidar profiles.

Observing Seasonal and Diurnal Hydrometeorological Variability Within a Tropical Alpine Valley: Implications for Evapotranspiration

NASA Astrophysics Data System (ADS)

Hellstrom, R. A.; Mark, B. G.

2007-12-01

Conditions of glacier recession in the seasonally dry tropical Peruvian Andes motivate research to better constrain the hydrological balance in alpine valleys. There is an outstanding need to better understand the impact of the pronounced tropical hygric seasonality on energy and water budgets within pro-glacial valleys that channel glacier runoff to stream flow. This paper presents a novel embedded network installed in the glacierized Llanganuco valley of the Cordillera Blanca (9°S) comprising eight low-cost, discrete temperature and humidity microloggers ranging from 3470 to 4740 masl and an automatic weather station at 3850 masl. Data are aggregated into distinct dry and wet periods sampled from two full annual cycles (2004-2006) to explore patterns of diurnal and seasonal variability. The magnitude of diurnal solar radiation varies little within the valley between the dry and wet periods, while wet season near-surface air temperatures are cooler. Seasonally characteristic diurnal fluctuations in lapse rate partially regulate convection and humidity. Steep lapse rates during the wet season afternoon promote up-slope convection of warm, moist air and nocturnal rainfall events. Standardized grass reference evapotranspiration (ET0) was estimated using the FAO-56 algorithm of the United Nations Food and Agriculture Organization and compared with estimates of actual ET from the process-based BROOK90 model that incorporates more realistic vegetation parameters. Comparisons of composite diurnal cycles of ET for the wet and dry periods suggest about twice the daily ET0 during the dry period, attributed primarily to the 500% higher vapor pressure deficit and 20% higher daily total solar irradiance. Conversely, the near absence of rainfall during the dry season diminishes actual ET below that of the wet season by two orders of magnitude. Nearly cloud-free daylight conditions are critical for ET during the wet season. We found significant variability of ET with elevation

Central melanopsin projections in the diurnal rodent, Arvicanthis niloticus

PubMed Central

Langel, Jennifer L.; Smale, Laura; Esquiva, Gema; Hannibal, Jens

2015-01-01

The direct effects of photic stimuli on behavior are very different in diurnal and nocturnal species, as light stimulates an increase in activity in the former and a decrease in the latter. Studies of nocturnal mice have implicated a select population of retinal ganglion cells that are intrinsically photosensitive (ipRGCs) in mediation of these acute responses to light. ipRGCs are photosensitive due to the expression of the photopigment melanopsin; these cells use glutamate and pituitary adenylate cyclase-activating polypeptide (PACAP) as neurotransmitters. PACAP is useful for the study of central ipRGC projections because, in the retina, it is found exclusively within melanopsin cells. Little is known about the central projections of ipRGCs in diurnal species. Here, we first characterized these cells in the retina of the diurnal Nile grass rat using immunohistochemistry (IHC). The same basic subtypes of melanopsin cells that have been described in other mammals were present, but nearly 25% of them were displaced, primarily in its superior region. PACAP was present in 87.7% of all melanopsin cells, while 97.4% of PACAP cells contained melanopsin. We then investigated central projections of ipRGCs by examining the distribution of immunoreactive PACAP fibers in intact and enucleated animals. This revealed evidence that these cells project to the suprachiasmatic nucleus, lateral geniculate nucleus (LGN), pretectum, and superior colliculus. This distribution was confirmed with injections of cholera toxin subunit β coupled with Alexa Fluor 488 in one eye and Alexa Fluor 594 in the other, combined with IHC staining of PACAP. These studies also revealed that the ventral and dorsal LGN and the caudal olivary pretectal nucleus receive less innervation from ipRGCs than that reported in nocturnal rodents. Overall, these data suggest that although ipRGCs and their projections are very similar in diurnal and nocturnal rodents, they may not be identical. PMID:26236201

Central melanopsin projections in the diurnal rodent, Arvicanthis niloticus.

PubMed

Langel, Jennifer L; Smale, Laura; Esquiva, Gema; Hannibal, Jens

2015-01-01

The direct effects of photic stimuli on behavior are very different in diurnal and nocturnal species, as light stimulates an increase in activity in the former and a decrease in the latter. Studies of nocturnal mice have implicated a select population of retinal ganglion cells that are intrinsically photosensitive (ipRGCs) in mediation of these acute responses to light. ipRGCs are photosensitive due to the expression of the photopigment melanopsin; these cells use glutamate and pituitary adenylate cyclase-activating polypeptide (PACAP) as neurotransmitters. PACAP is useful for the study of central ipRGC projections because, in the retina, it is found exclusively within melanopsin cells. Little is known about the central projections of ipRGCs in diurnal species. Here, we first characterized these cells in the retina of the diurnal Nile grass rat using immunohistochemistry (IHC). The same basic subtypes of melanopsin cells that have been described in other mammals were present, but nearly 25% of them were displaced, primarily in its superior region. PACAP was present in 87.7% of all melanopsin cells, while 97.4% of PACAP cells contained melanopsin. We then investigated central projections of ipRGCs by examining the distribution of immunoreactive PACAP fibers in intact and enucleated animals. This revealed evidence that these cells project to the suprachiasmatic nucleus, lateral geniculate nucleus (LGN), pretectum, and superior colliculus. This distribution was confirmed with injections of cholera toxin subunit β coupled with Alexa Fluor 488 in one eye and Alexa Fluor 594 in the other, combined with IHC staining of PACAP. These studies also revealed that the ventral and dorsal LGN and the caudal olivary pretectal nucleus receive less innervation from ipRGCs than that reported in nocturnal rodents. Overall, these data suggest that although ipRGCs and their projections are very similar in diurnal and nocturnal rodents, they may not be identical.

Diurnal, synoptic and seasonal variability of atmospheric CO2 in the Paris megacity area

NASA Astrophysics Data System (ADS)

Xueref-Remy, Irène; Dieudonné, Elsa; Vuillemin, Cyrille; Lopez, Morgan; Lac, Christine; Schmidt, Martina; Delmotte, Marc; Chevallier, Frédéric; Ravetta, François; Perrussel, Olivier; Ciais, Philippe; Bréon, François-Marie; Broquet, Grégoire; Ramonet, Michel; Spain, T. Gerard; Ampe, Christophe

2018-03-01

Most of the global fossil fuel CO2 emissions arise from urbanized and industrialized areas. Bottom-up inventories quantify them but with large uncertainties. In 2010-2011, the first atmospheric in situ CO2 measurement network for Paris, the capital of France, began operating with the aim of monitoring the regional atmospheric impact of the emissions coming from this megacity. Five stations sampled air along a northeast-southwest axis that corresponds to the direction of the dominant winds. Two stations are classified as rural (Traînou - TRN; Montgé-en-Goële - MON), two are peri-urban (Gonesse - GON; Gif-sur-Yvette - GIF) and one is urban (EIF, located on top of the Eiffel Tower). In this study, we analyze the diurnal, synoptic and seasonal variability of the in situ CO2 measurements over nearly 1 year (8 August 2010-13 July 2011). We compare these datasets with remote CO2 measurements made at Mace Head (MHD) on the Atlantic coast of Ireland and support our analysis with atmospheric boundary layer height (ABLH) observations made in the center of Paris and with both modeled and observed meteorological fields. The average hourly CO2 diurnal cycles observed at the regional stations are mostly driven by the CO2 biospheric cycle, the ABLH cycle and the proximity to urban CO2 emissions. Differences of several µmol mol-1 (ppm) can be observed from one regional site to the other. The more the site is surrounded by urban sources (mostly residential and commercial heating, and traffic), the more the CO2 concentration is elevated, as is the associated variability which reflects the variability of the urban sources. Furthermore, two sites with inlets high above ground level (EIF and TRN) show a phase shift of the CO2 diurnal cycle of a few hours compared to lower sites due to a strong coupling with the boundary layer diurnal cycle. As a consequence, the existence of a CO2 vertical gradient above Paris can be inferred, whose amplitude depends on the time of the day and on

Water-stress-induced breakdown of carbon-water relations: indicators from diurnal FLUXNET patterns

NASA Astrophysics Data System (ADS)

Nelson, Jacob A.; Carvalhais, Nuno; Migliavacca, Mirco; Reichstein, Markus; Jung, Martin

2018-04-01

Understanding of terrestrial carbon and water cycles is currently hampered by an uncertainty in how to capture the large variety of plant responses to drought. In FLUXNET, the global network of CO2 and H2O flux observations, many sites do not uniformly report the ancillary variables needed to study drought response physiology. To this end, we outline two data-driven indicators based on diurnal energy, water, and carbon flux patterns derived directly from the eddy covariance data and based on theorized physiological responses to hydraulic and non-stomatal limitations. Hydraulic limitations (i.e. intra-plant limitations on water movement) are proxied using the relative diurnal centroid (CET*), which measures the degree to which the flux of evapotranspiration (ET) is shifted toward the morning. Non-stomatal limitations (e.g. inhibitions of biochemical reactions, RuBisCO activity, and/or mesophyll conductance) are characterized by the Diurnal Water-Carbon Index (DWCI), which measures the degree of coupling between ET and gross primary productivity (GPP) within each day. As a proof of concept we show the response of the metrics at six European sites during the 2003 heat wave event, showing a varied response of morning shifts and decoupling. Globally, we found indications of hydraulic limitations in the form of significantly high frequencies of morning-shifted days in dry/Mediterranean climates and savanna/evergreen plant functional types (PFTs), whereas high frequencies of decoupling were dominated by dry climates and grassland/savanna PFTs indicating a prevalence of non-stomatal limitations in these ecosystems. Overall, both the diurnal centroid and DWCI were associated with high net radiation and low latent energy typical of drought. Using three water use efficiency (WUE) models, we found the mean differences between expected and observed WUE to be -0.09 to 0.44 µmol mmol-1 and -0.29 to -0.40 µmol mmol-1 for decoupled and morning-shifted days, respectively, compared

Summer to Winter Diurnal Variabilities of Temperature and Water Vapour in the Lowermost Troposphere as Observed by HAMSTRAD over Dome C, Antarctica

NASA Astrophysics Data System (ADS)

Ricaud, P.; Genthon, C.; Durand, P.; Attié, J.-L.; Carminati, F.; Canut, G.; Vanacker, J.-F.; Moggio, L.; Courcoux, Y.; Pellegrini, A.; Rose, T.

2012-04-01

The HAMSTRAD (H2O Antarctica Microwave Stratospheric and Tropospheric Radiometers) microwave radiometer operating at 60 GHz (oxygen line, thus temperature) and 183 GHz (water vapour line) has been permanently deployed at the Dome C station, Concordia, Antarctica [75°06'S, 123°21'E, 3,233 m above mean sea level] in January 2010 to study long-term trends in tropospheric absolute humidity and temperature. The great sensitivity of the instrument in the lowermost troposphere helped to characterize the diurnal cycle of temperature and H2O from the austral summer (January 2010) to the winter (June 2010) seasons from heights of 10 to 200 m in the planetary boundary layer (PBL). The study has characterized the vertical resolution of the HAMSTRAD measurements: 10-20 m for temperature and 25-50 m for H2O. A strong diurnal cycle in temperature and H2O (although noisier) has been measured in summertime at 10 m, decreasing in amplitude with height, and phase-shifted by about 4 h above 50 m with a strong H2O-temperature correlation (>0.8) throughout the entire PBL. In autumn, whilst the diurnal cycle in temperature and H2O is less intense, a 12-h phase shift is observed above 30 m. In wintertime, a weak diurnal signal measured between 10 to 200 m is attributed to the methodology employed, which consists of monthly averaged data, and that combines air masses from different origins (sampling effect) and not to the imprint of the null solar irradiation. In situ sensors scanning the entire 24-h period, radiosondes launched at 2000 local solar time (LST) and European Centre for Medium-Range Weather Forecasts (ECMWF) analyses at 0200, 0800, 1400 and 2000 LST agree very well with the HAMSTRAD diurnal cycles for temperature and relatively well for absolute humidity. For temperature, HAMSTRAD tends to be consistent with all the other datasets but shows a smoother vertical profile from 10 to 100 m compared to radiosondes and in-situ data, with ECMWF profiles even smoother than HAMSTRAD

Field observation of diurnal dissolved oxygen fluctuations in shallow groundwater.

PubMed

Schilling, Keith E; Jacobson, Peter

2015-01-01

Dissolved oxygen (DO) concentrations influence many biogeochemical processes in groundwater systems but studies of temporal variability in DO are lacking. In this study, we used an optical DO probe to measure rapid changes in concentration due to plant-groundwater interaction at an alluvial aquifer field site in Iowa. Diurnal DO concentrations were observed during mid- to late-summer when soil conditions were dry, fluctuating approximately 0.2 to 0.3 mg/L on a daily basis. DO fluctuations in groundwater were out-of-phase with diurnal water table fluctuations, increasing during the day and decreasing at night. DO consumption at night is likely due to increased soil autotrophic and heterotrophic respiration linked with patterns of carbon supply derived from daytime photosynthetic activity, and consistent with available literature on diurnal soil respiration patterns. Although more work is needed to quantify specific processes, our results indicate the potential usefulness of the new optical DO technology to reveal insights regarding many ecohydrological processes. © 2014, National Ground Water Association.

Diurnal variation in the functioning of cowpea nodules.

PubMed

Rainbird, R M; Atkins, C A; Pate, J S

1983-06-01

Nitrogenase (EC 1.7.99.2) activity of nodules of cowpea (Vigna unguiculata [L.] Walp), maintained under conditions of a 12-hour day at 30 degrees C and 800 to 1,000 microeinsteins per square meter per second (photosynthetically active radiation) and a 12-hour night at 20 degrees C, showed a marked diurnal variation with the total electron flux through the enzyme at night being 60% of that in the photoperiod. This diurnal pattern was, however, due to changes in hydrogen evolution. The rate of nitrogen fixation, measured by short-term (15)N(2) assimilation or estimated from the difference in hydrogen evolution in air or Ar:O(2) (80:20; v/v), showed no diurnal variation. Carbon dioxide released from nodules showed a diurnal variation synchronized with that of nitrogenase functioning and, as a consequence, the apparent ;respiratory cost' of nitrogen fixation in the photoperiod was almost double that at night (9.74 +/- 0.38 versus 5.70 +/- 0.90 moles CO(2) evolved per mole N(2) fixed). Separate carbon and nitrogen balances constructed for nodules during the photoperiod and dark period showed that, at night, nodule functioning required up to 40% less carbohydrate to achieve the same level of nitrogen fixation as during the photoperiod (2.4 versus 1.4 moles hexose per mole N(2) fixed).Stored reserves of nonstructural carbohydrate of the nodule only partly satisfied the requirement for carbon at night, and fixation was dependent on continued import of translocated assimilates at all times. Measurements of the soluble nitrogen pools of the nodule together with (15)N studies indicated that, both during the day and night, nitrogenous products of fixation were effectively translocated to all organs of the host plant despite low rates of transpiration at night. Reduced fluxes of water through the plant at night were apparently counteracted by increased concentration of nitrogen, especially as ureides, in the xylem stream.

Retrieval of the photochemical reflectance index for assessing xanthophyll cycle activity: a comparison of near-surface optical sensors

NASA Astrophysics Data System (ADS)

Harris, A.; Gamon, J. A.; Pastorello, G. Z.; Wong, C. Y. S.

2014-11-01

Unattended optical sensors are increasingly being deployed on eddy covariance flux towers and are often used to complement existing vegetation and micrometeorological measurements to enable assessment of biophysical states and biogeochemical processes over a range of spatial scales. Of particular interest are sensors that can measure the photochemical reflectance index (PRI), which can provide information pertaining to leaf pigments and photosynthetic activity. This interest has facilitated the production of a new range of lower-cost multispectral sensors specifically designed to measure temporal changes in the PRI signal. However, little is known about the characteristics (spectral, radiometric and temporal) of many of these PRI sensors, making it difficult to compare data obtained from these sensors across time, geographical locations and instruments. Furthermore, direct testing of the capability of these sensors to actually detect the conversion of the xanthophyll cycle, which is the original biological basis of the PRI diurnal signal, is largely absent, often resulting in an unclear interpretation of the signal, particularly given the wide range of factors now known to influence PRI. Through a series of experiments, we assess the sensitivity of one of the leading brands of PRI sensor (Skye SKR 1800) to changes in vegetation photosynthetic activity in response to changing irradiance. We compare the results with those obtained using a more expensive industry-standard visible to near-infrared hyperspectral spectrometer (PP Systems UniSpec) and determine the radiometric compatibility of measurements made by the different instruments. Results suggest that the SKR 1800 instrument is able to track rapid (seconds to minutes) and more gradual diurnal changes in photosynthetic activity associated with xanthophyll cycle pigment conversion. Measurements obtained from both the high and lower cost instrument were significantly linearly correlated but were subject to a large

Semi-annual Sq-variation in solar activity cycle

NASA Astrophysics Data System (ADS)

Pogrebnoy, V.; Malosiev, T.

The peculiarities of semi-annual variation in solar activity cycle have been studied. The data from observatories having long observational series and located in different latitude zones were used. The following observatories were selected: Huancayo (magnetic equator), from 1922 to 1959; Apia (low latitudes), from 1912 to 1961; Moscow (middle latitudes), from 1947 to 1965. Based on the hourly values of H-components, the average monthly diurnal amplitudes (a difference between midday and midnight values), according to five international quiet days, were computed. Obtained results were compared with R (relative sunspot numbers) in the ranges of 0-30R, 40-100R, and 140-190R. It was shown, that the amplitude of semi-annual variation increases with R, from minimum to maximum values, on average by 45%. At equatorial Huancayo observatory, the semi-annual Sq(H)-variation appears especially clearly: its maximums take place at periods of equinoxes (March-April, September-October), and minimums -- at periods of solstices (June-July, December-January). At low (Apia observatory) and middle (Moscow observatory) latitudes, the character of semi-annual variation is somewhat different: it appears during the periods of equinoxes, but considerably less than at equator. Besides, with the growth of R, semi-annual variation appears against a background of annual variation, in the form of second peaks (maximum in June). At observatories located in low and middle latitudes, second peaks become more appreciable with an increase of R (March-April and September-October). During the periods of low solar activity, they are insignificant. This work has been carried out with the support from International Scientific and Technology Center (Project #KR-214).

Seeking Augmented Information Content Concerning Diurnal Precipitation Achieved by Combining TRMM-PR and CloudSat-CPR Radar Data Sets

NASA Technical Reports Server (NTRS)

Smith, Eric A.; Kuo, Kwo-Sen; Carty, Hezekiah

2008-01-01

The CloudSat satellite's Cloud Profiling Radar (CPR) is a highly sensitive 94 GHz (W-band) nadir viewing radar system flown in retrograde sun synchronous orbit useful for determining the vertical structure of cloud hydrometeors down to sensitivity of approx. -30 dBZ reflectivity factor. Given this sensitivity, it is possible to unambiguously measure precipitation rates in clouds over a spectrum extending from approx. 0.08 - 3.0 mm hr (sup -1) down to altitudes of 0.5 km with approx.0.25 km vertical binning. This enables an effective means to measure a great deal of the drizzle and light rain spectrum. However, because of its near-polar sunsynchronous orbit, CloudSat cannot sample the diurnal cycle of precipitation, nor with its nadir-only CPR view can it obtain a high duty cycle in sampling precipitation at fixed local times over fixed positions. On the other hand, the TRMM satellite, which is flown in a non-sunsynchronous 35-degree inclined orbit carrying the 13.8 GHz KU-band Precipitation Radar (PR) scanning through nadir over an approx. 225 km swath, can sample both the diurnal cycle and with a much improved duty cycle relative to CloudSat. Moreover, the PR and CPR have the same 0.25 km vertical binning capability. The PR's greatest shortcoming is its approx. +17 dBZ sensitivity, which eliminates the possibility of measuring rain rates below -0.3-0.5 mm hr(sup -1), which can involve rainfall accumulations of up to 50% of the total over some regions. This begs the question of whether by combining CPR and PR data sets, whether it is possible to obtain an augmented measurement of the diurnal precipitation cycle. By collecting complimentary datasets during CloudSat and TRMM satellite orbit crossings within a delta t = 45-min proximity window, it is possible to demonstrate that whenever TRMM detects a precipitation signal, the correlations along the vertical axis between the reflectivities acquired from the CPR and PR are in inverse proportion to the magnitude of the

Resynchronization of circadian sleep-wake and temperature cycles in the squirrel monkey following phase shifts of the environmental light-dark cycle

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wexler, D.B.; Moore-ede, M.C.

1986-12-01

Circadian rhythms in physiological and behavioral functions gradually resynchronize after phase shifts in environmental time cues. In order to characterize the rate of circadian resynchronization in a diurnal primate model, the temperature, locomotor activity, and polygraphically determined sleep-wake states were monitored in squirrel monkeys before and after 8-h phase shifts of an environmental light-dark cycle of 12 h light and 12 h dark (LD 12:12). For the temperature rhythm, resynchronization took 4 d after phase delay shift and 5 d after phase advance shift; for the rest-activity cycle, resynchronization times were 3 d and 6 d, respectively. The activity acrophasemore » shifted more rapidly than the temperature acrophase early in the post-delay shift interval, but this internal desynchronization between rhythms disappeared during the course of resynchronization. Further study of the early resynchronization process requires emphasis on identifying evoked effects and measuring circadian pacemaker function. 13 references.« less

Diurnal alterations of brain electrical activity in healthy adults: a LORETA study.

PubMed

Toth, Marton; Kiss, Attila; Kosztolanyi, Peter; Kondakor, Istvan

2007-01-01

EEG background activity was investigated by low resolution brain electromagnetic tomography (LORETA) to test the diurnal alterations of brain electrical activity in healthy adults. Fourteen right-handed healthy male postgraduate medical students were examined four times (8 a.m., 2 p.m., 8 p.m. and next day 2 p.m.). LORETA was computed to localize generators of EEG frequency components. Comparing the EEG activity between 2 p.m. and 8 a.m., increased activity was seen (1) in theta band (6.5-8 Hz) in the left prefrontal, bilateral mesial frontal and anterior cingulate cortex; (2) in alpha2 band (10.5-12 Hz) in the bilateral precuneus and posterior parietal cortex as well as in the right temporo-occipital cortex; (3) in beta1-2-3 band (12.5-30 Hz) in the right hippocampus and parieto-occipital cortex, left frontal and bilateral cingulate cortex. Comparing the brain activity between 8 p.m. and 8 a.m., (1) midline theta activity disappeared; (2) increased alpha2 band activity was seen in the left hemisphere (including the left hippocampus); and (3) increased beta bands activity was found over almost the whole cortex (including both of hippocampi) with the exception of left temporo-occipital region. There were no significant changes between the background activities of 2 p.m. and next day 2 p.m. Characteristic distribution of increased activity of cortex (no change in delta band, and massive changes in the upper frequency bands) may mirror increasing activation of reticular formation and thus evoked thalamocortical feedback mechanisms as a sign of maintenance of arousal.

Observed diurnal variations in Mars Science Laboratory Dynamic Albedo of Neutrons passive mode data

NASA Astrophysics Data System (ADS)

Tate, C. G.; Moersch, J.; Jun, I.; Mitrofanov, I.; Litvak, M.; Boynton, W. V.; Drake, D.; Fedosov, F.; Golovin, D.; Hardgrove, C.; Harshman, K.; Kozyrev, A. S.; Kuzmin, R.; Lisov, D.; Maclennan, E.; Malakhov, A.; Mischna, M.; Mokrousov, M.; Nikiforov, S.; Sanin, A. B.; Starr, R.; Vostrukhin, A.

2018-06-01

The Mars Science Laboratory Dynamic Albedo of Neutrons (DAN) experiment measures the martian neutron leakage flux in order to estimate the amount of water equivalent hydrogen present in the shallow regolith. When DAN is operating in passive mode, it is sensitive to neutrons produced through the interactions of galactic cosmic rays (GCR) with the regolith and atmosphere and neutrons produced by the rover's Multi-Mission Radioisotope Thermoelectric Generator (MMRTG). During the mission, DAN passive mode data were collected over the full diurnal cycle at the locations known as Rocknest (sols 60-100) and John Klein (sols 166-272). A weak, but unexpected, diurnal variation was observed in the neutron count rates reported at these locations. We investigate different hypotheses that could be causing these observed variations. These hypotheses are variations in subsurface temperature, atmospheric pressure, the exchange of water vapor between the atmosphere and regolith, and instrumental effects on the neutron count rates. Our investigation suggests the most likely factors contributing to the observed diurnal variations in DAN passive data are instrumental effects and time-variable preferential shielding of alpha particles, with other environmental effects only having small contributions.

Diel changes in stream periphyton extracellular enzyme activity throughout community development on inert and organic substrates

NASA Astrophysics Data System (ADS)

Rier, S. T.; Francoeur, S. N.; Kuehn, K. A.

2005-05-01

We tested the hypothesis that algal photosynthesis in stream periphyton communities would influence the activities of extracellular enzymes produced by associated heterotrophic bacteria and fungi to acquire organic compounds and inorganic nutrients. We approached this question by looking for diurnal variation in activities of four extracellular enzymes in periphyton communities that were grown on either inert (glass fiber filters) or organic (leaves) substrata that there were incubated in stream-side channels that were either open to full sun or shaded. Substrata were subsampled for β-glucosidase, alkaline phosphotase, leucine-aminopeptidase, and phenol oxidase activities at 3-5 hr. intervals over two consecutive diurnal cycles that were repeated at an early and later stage of periphyton community development. Activities of all enzymes displayed diurnal periodicity but the strength of the diurnal effects depended largely on the substrate type and stage of community development. The most consistent diurnal change was observed with phenol oxidase activity with significantly greater (p<0.05) activities being observed in during the day for both stages of community development and for both substrate types. It is likely that oxygen produced by algal photosynthesis is driving the activity of this oxidative enzyme and that algae might indirectly influence the decomposition of phenolic compounds.

Psychosocial determinants of diurnal alpha-amylase among healthy Quebec workers.

PubMed

Marchand, Alain; Juster, Robert-Paul; Lupien, Sonia J; Durand, Pierre

2016-04-01

Salivary alpha-amylase (sAA) is a stress-sensitive biomarker the shows promise as an indirect proxy of sympathetic-adrenal-medullary axis activities that are otherwise difficult to discern non-invasively. This comprehensive study investigated diurnal sAA in association with numerous psychosocial characteristics related to mental health, work stress, and non-work stress. Participants included 395 workers (56.1% women, age: M=41.3, SD=10.81) from across 34 distinct workplaces. Diurnal sAA was sampled over two non-consecutive work days at awakening, 30 min after awakening, 14h00, 16h00, and bedtime. Well-validated psychometrics and survey items were used to measure mental health (psychological distress, depression, burnout, work characteristics) (task design, demands, social relations, gratifications), and non-work characteristics (marital/parental status, economic statuses, marital and parental stress, work-family conflicts). Preliminary results revealed that men showed occasionally higher sAA concentrations than women. Multilevel regressions were used to analyze sAA concentrations nested according to levels (i) for each time-point, (ii) between workers, and (iii) across workplaces while covarying for time of awakening, sex, age, cigarette smoking, alcohol consumption, regular physical activity, psychotropic drug use, and body mass index. Main results revealed that psychological demands, support from colleagues, interpersonal conflicts, job recognition and job insecurity appear to be associated with diurnal sAA, while non-work factors did not. Our findings showing a distinct diurnal profile for sAA replicate and expand those of Nater et al. (2007, Psychoneuroendocrinology 32, 392-401), providing further evidence that sAA is associated to subjective psychosocial factors. Copyright © 2016 Elsevier Ltd. All rights reserved.

Does the diurnal increase in central temperature interact with pre-cooling or passive warm-up of the leg?

PubMed

Racinais, Sébastien; Blonc, Stephen; Oksa, Juha; Hue, Olivier

2009-01-01

Seven male subjects volunteered to participate in an investigation of whether the diurnal increase in core temperature influences the effects of pre-cooling or passive warm-up on muscular power. Morning (07:00-09:00h) and afternoon (17:00-19:00h) evaluation of maximal power output during a cycling sprint was performed on different days in a control condition (room at 21.8 degrees C, 69% rh), after 30min of pre-cooling in a cold bath (16 degrees C), or after 30min of passive warm-up in a hot bath (38 degrees C). Despite an equivalent increase from morning to afternoon in core temperature in all conditions (+0.4 degrees C, P<0.05), power output displayed a diurnal increase in control condition only. A local cooling or heating of the leg in a neutral environment blunted the diurnal variation in muscular power. Because pre-cooling decreases muscle power, force and velocity irrespective of time-of-day, athletes should strictly avoid any cooling before a sprint exercise. In summary, diurnal variation in muscle power output seems to be more influenced by muscle rather than core temperature.

Diurnal Activity of Drosophila suzukii (Diptera: Drosophilidae) in Highbush Blueberry and Behavioral Response to Irrigation and Application of Insecticides.

PubMed

Van Timmeren, Steven; Horejsi, Logan; Larson, Shadi; Spink, Katherine; Fanning, Philip; Isaacs, Rufus

2017-10-01

Spotted wing Drosophila, Drosophila suzukii Matsumura (Diptera: Drosophilidae), is an invasive vinegar fly that has become a primary direct pest of berry crops worldwide. We conducted 2 yr of behavioral studies in blueberry plantings to determine how fly activity varied throughout the day. Observations of diurnal activity of adult D. suzukii found the greatest activity in the morning hours between 0600 and 0800 hours, when the majority of flies were on the berries. Flies were also active in the evening mainly between 1800 and 2000 hours; however, this trend was more prominent in 2015, which had cooler and more humid evenings. Experiments examining the effect of irrigation on D. suzukii behavior showed that flies remained active during and after irrigation. The effect of insecticide treatments alone and in combination with irrigation revealed that treatment with spinosad had limited effects on the number of flies per bush, whereas spinetoram reduced the number flying and on the bushes in some cases. Zeta-cypermethrin caused longer and more consistent reduction in D. suzukii flying and on bushes. In all treatments, we observed surviving flies flying near and on treated bushes, indicating that these insecticides do not completely deter fly activity. Irrigation did not influence the effects of zeta-cypermethrin on fly behavior during daily observations up to 3 d after application. Our results highlight that the diurnal patterns of activity of D. suzukii on host plants are flexible and are relatively unaffected by irrigation or insecticide applications. © The Author 2017. Published by Oxford University Press on behalf of Entomological Society of America. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Dim light at night increases immune function in Nile grass rats, a diurnal rodent.

PubMed

Fonken, Laura K; Haim, Achikam; Nelson, Randy J

2012-02-01

With the widespread adoption of electrical lighting during the 20th century, human and nonhuman animals became exposed to high levels of light at night for the first time in evolutionary history. This divergence from the natural environment may have significant implications for certain ecological niches because of the important influence light exerts on the circadian system. For example, circadian disruption and nighttime light exposure are linked to changes in immune function. The majority of studies investigating the effects of light exposure and circadian disruption on the immune system use nocturnal rodents. In diurnal species, many hormones and immune parameters vary with secretion patterns 180° out of phase to those of nocturnal rodents. Thus, the authors investigated the effects of nighttime light exposure on immunocompetence in diurnal Nile grass rats (Arvicanthis niloticus). Rats were housed in either standard 14-h light (L):10-h dark (D) cycles with L ∼150 lux and D 0 lux or dim light at night (dLAN) cycles of LD 14:10 with L ∼150 lux and D 5 lux for 3 wks, then tested for plasma bactericidal capacity, as well as humoral and cell-mediated immune responses. Rats exposed to dLAN showed increased delayed-type hypersensitivity pinna swelling, which is consistent with enhanced cell-mediated immune function. dLAN rats similarly showed increased antibody production following inoculation with keyhole lymphocyte hemocyanin (KLH) and increased bactericidal capacity. Daytime corticosterone concentrations were elevated in grass rats exposed to nighttime dim light, which may have influenced immunological measures. Overall, these results indicate nighttime light affects immune parameters in a diurnal rodent.

[Diurnal and seasonal variations of surface atmospheric CO2 concentration in the river estuarine marsh].

PubMed

Zhang, Lin-Hai; Tong, Chuan; Zeng, Cong-Sheng

2014-03-01

Characteristics of diurnal and seasonal variations of surface atmospheric CO2 concentration were analyzed in the Minjiang River estuarine marsh from December 2011 to November 2012. The results revealed that both the diurnal and seasonal variation of surface atmospheric CO2 concentration showed single-peak patterns, with the valley in the daytime and the peak value at night for the diurnal variations, and the maxima in winter and minima in summer for the seasonal variation. Diurnal amplitude of CO2 concentration varied from 16.96 micromol x mol(-1) to 38.30 micromol x mol(-1). The seasonal averages of CO2 concentration in spring, summer, autumn and winter were (353.74 +/- 18.35), (327.28 +/- 8.58), (354.78 +/- 14.76) and (392.82 +/- 9.71) micromol x mol(-1), respectively, and the annual mean CO2 concentration was (357.16 +/- 26.89) micromol x mol(-1). The diurnal CO2 concentration of surface atmospheric was strongly negatively correlated with temperature, wind speed, photosynthetically active radiation and total solar radiation (P < 0.05). The diurnal concentration of CO2 was negatively related with tidal level in January, but significantly positively related in July.

Multitemporal diurnal AVIRIS images of a forested ecosystem

NASA Technical Reports Server (NTRS)

Ustin, Susan L.; Smith, Milton O.; Adams, John B.

1992-01-01

Both physiological and ecosystem structural information may be derived from diurnal images. Structural information may be inferred from changes in canopy shadows between images and from changes in spectral composition due to changes in proportions of subpixel mixing resulting from the differences in sun/view angles. Physiological processes having diurnal scales also may be measurable if a stable basis for spectral comparison can be established. Six diurnal images of an area east of Mt. Shasta, CA were acquired on 22 Sep. 1989. This unique diurnal data set provided an opportunity to test the consistency of endmember fractions and residuals. It was expected that shade endmember abundances would show the greatest change as lighting geometry changed and less change in the normalized fractional proportion of other endmembers. Diurnal changes in spectral features related to physiological characteristics may be identifiable as changes in wavelength specific residuals.

Diurnal variations and source apportionment of ozone at the summit of Mount Huang, a rural site in Eastern China.

PubMed

Gao, J; Zhu, B; Xiao, H; Kang, H; Hou, X; Yin, Y; Zhang, L; Miao, Q

2017-03-01

Comprehensive measurements were conducted at the summit of Mount (Mt.) Huang, a rural site located in eastern China during the summer of 2011. They observed that ozone showed pronounced diurnal variations with high concentrations at night and low values during daytime. The Weather Research and Forecasting with Chemistry (WRF-Chem) model was applied to simulate the ozone concentrations at Mt. Huang in June 2011. With processes analysis and online ozone tagging method we coupled into the model system, the causes of this diurnal pattern and the contributions from different source regions were investigated. Our results showed that boundary layer diurnal cycle played an important role in driving the ozone diurnal variation. Further analysis showed that the negative contribution of vertical mixing was significant, resulting in the ozone decrease during the daytime. In contrast, ozone increased at night owing to the significant positive contribution of advection. This shifting of major factor between vertical mixing and advection formed this diurnal variation. Ozone source apportionment results indicated that approximately half was provided by inflow effect of ozone from outside the model domain (O 3-INFLOW ) and the other half was formed by ozone precursors (O 3-PBL ) emitted in eastern, central, and southern China. In the O 3-PBL , 3.0% of the ozone was from Mt. Huang reflecting the small local contribution (O 3-LOC ) and the non-local contributions (O 3-NLOC ) accounted for 41.6%, in which ozone from the southerly regions contributed significantly, for example, 9.9% of the ozone originating from Jiangxi, representing the highest geographical contributor. Because the origin and variation of O 3-NLOC was highly related to the diurnal movements in boundary layer, the similar diurnal patterns between O 3-NLOC and total ozone both indicated the direct influence of O 3-NLOC and the importance of boundary layer diurnal variations in the formation of such distinct diurnal

Evidence of a Pivotal Role for the Distal Part of the Complement Cascade in the Diurnal Release of Hematopoietic Stem Cells Into Peripheral Blood.

PubMed

Borkowska, Sylwia; Suszynska, Malwina; Ratajczak, Janina; Ratajczak, Mariusz Z

2016-01-01

We found that diurnal activation of the three evolutionarily ancient proteolytic cascades in peripheral blood (PB), namely, the complement, coagulation, and fibrinolytic cascades, late at night or in the early morning hours, precedes the diurnal release of hematopoietic stem/progenitor cells (HSPCs) from bone marrow (BM) into PB in wild-type mice. Moreover, activation of the distal part of the complement cascade (ComC), involving cleavage of the fifth component (C5), seems to play a crucial role in pharmacological mobilization of HSPCs. In order to shed more light on the role of diurnal rhythms in the egress of HSPCs, we studied diurnal changes in the number of circulating HSPCs in C5-deficient mice and did not observe diurnal changes in the number of these cells circulating in PB in C5(-/-) animals. Based on this finding, we conclude that activation of the distal part of the ComC, C5 cleavage, and release of C5a and desArgC5a are required in executing the diurnal release of HSPCs from BM into PB. Moreover, the fact that C5(-/-) mice still displayed normal activation of the coagulation and fibrinolytic cascades indicates that, of all the proteolytic cascades, the ComC is the dominant player regulating diurnal egress of HSPCs.

Using the Atmospheric Radiation Measurement (ARM) Datasets to Evaluate Climate Models in Simulating Diurnal and Seasonal Variations of Tropical Clouds

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wang, Hailong; Burleyson, Casey D.; Ma, Po-Lun

We use the long-term Atmospheric Radiation Measurement (ARM) datasets collected at the three Tropical Western Pacific (TWP) sites as a tropical testbed to evaluate the ability of the Community Atmosphere Model (CAM5) to simulate the various types of clouds, their seasonal and diurnal variations, and their impact on surface radiation. We conducted a series of CAM5 simulations at various horizontal grid spacing (around 2°, 1°, 0.5°, and 0.25°) with meteorological constraints from reanalysis. Model biases in the seasonal cycle of cloudiness are found to be weakly dependent on model resolution. Positive biases (up to 20%) in the annual mean totalmore » cloud fraction appear mostly in stratiform ice clouds. Higher-resolution simulations do reduce the positive bias in the frequency of ice clouds, but they inadvertently increase the negative biases in convective clouds and low-level liquid clouds, leading to a positive bias in annual mean shortwave fluxes at the sites, as high as 65 W m-2 in the 0.25° simulation. Such resolution-dependent biases in clouds can adversely lead to biases in ambient thermodynamic properties and, in turn, feedback on clouds. Both the CAM5 model and ARM observations show distinct diurnal cycles in total, stratiform and convective cloud fractions; however, they are out-of-phase by 12 hours and the biases vary by site. Our results suggest that biases in deep convection affect the vertical distribution and diurnal cycle of stratiform clouds through the transport of vapor and/or the detrainment of liquid and ice. We also found that the modelled gridmean surface longwave fluxes are systematically larger than site measurements when the grid that the ARM sites reside in is partially covered by ocean. The modeled longwave fluxes at such sites also lack a discernable diurnal cycle because the ocean part of the grid is warmer and less sensitive to radiative heating/cooling compared to land. Higher spatial resolution is more helpful is this regard

[Seasonality and diurnal activity of Tabanidae (Diptera: Insecta) of canopy in the Adolpho Ducke Forested Reserve, Manaus, Amazonas State, Brazil].

PubMed

Oliveira, Aldenira F; Ferreira, Ruth L M; Rafael, José A

2007-01-01

The seasonality and diurnal flight activity of tabanids from canopy was studied at Ducke Reserve, in the county of Manaus, Amazonas State, Brazil, using a suspended trap installed at 20 m above the soil, connected to the carbon dioxide gas cylinder. During one day, twice monthly collects of Tabanidae were taken from April 2000 to June 2001. The material was collected from the trap in intervals of 2h and placed in plastic tubes. A total of 955 individuals, corresponding to thirty species were collected. Philipotabanus stigmaticalis (Kröber) (37.9%) was caught all over the year and showed higher flight activity between 12:00 p.m. and 4:00 p.m. Acanthocera marginalis Walker (16.3%) was more abundant in the less rainy months (July to November) with a higher activity period between 10:00 a.m. and 12:00 p.m. Acanthocera gorayebi Henriques Rafael (9.0%) was more abundant in July with more activity between 10:00 a.m. and 12:00 p.m. Dichelacera damicornis (Fabricius) (10.9%) was more abundant in the months of heavier rainfall (January, February and April) and showed higher diurnal activity between 10:00 a.m. and 2:00 p.m. Diachlorus podagricus (Fabricius) (6.6%) was caught throughout the year except in February and showed higher activity between 10:00 a.m. and 14:00 p.m. The climatic factors when correlated to the tabanids richness just showed significant correlation with precipitation, while the specimens abundance was correlated to humidity and precipitation.

Diurnal Transcriptome and Gene Network Represented through Sparse Modeling in Brachypodium distachyon.

PubMed

Koda, Satoru; Onda, Yoshihiko; Matsui, Hidetoshi; Takahagi, Kotaro; Yamaguchi-Uehara, Yukiko; Shimizu, Minami; Inoue, Komaki; Yoshida, Takuhiro; Sakurai, Tetsuya; Honda, Hiroshi; Eguchi, Shinto; Nishii, Ryuei; Mochida, Keiichi

2017-01-01

We report the comprehensive identification of periodic genes and their network inference, based on a gene co-expression analysis and an Auto-Regressive eXogenous (ARX) model with a group smoothly clipped absolute deviation (SCAD) method using a time-series transcriptome dataset in a model grass, Brachypodium distachyon . To reveal the diurnal changes in the transcriptome in B. distachyon , we performed RNA-seq analysis of its leaves sampled through a diurnal cycle of over 48 h at 4 h intervals using three biological replications, and identified 3,621 periodic genes through our wavelet analysis. The expression data are feasible to infer network sparsity based on ARX models. We found that genes involved in biological processes such as transcriptional regulation, protein degradation, and post-transcriptional modification and photosynthesis are significantly enriched in the periodic genes, suggesting that these processes might be regulated by circadian rhythm in B. distachyon . On the basis of the time-series expression patterns of the periodic genes, we constructed a chronological gene co-expression network and identified putative transcription factors encoding genes that might be involved in the time-specific regulatory transcriptional network. Moreover, we inferred a transcriptional network composed of the periodic genes in B. distachyon , aiming to identify genes associated with other genes through variable selection by grouping time points for each gene. Based on the ARX model with the group SCAD regularization using our time-series expression datasets of the periodic genes, we constructed gene networks and found that the networks represent typical scale-free structure. Our findings demonstrate that the diurnal changes in the transcriptome in B. distachyon leaves have a sparse network structure, demonstrating the spatiotemporal gene regulatory network over the cyclic phase transitions in B. distachyon diurnal growth.

Generation of diurnal variation for influent data for dynamic simulation.

PubMed

Langergraber, G; Alex, J; Weissenbacher, N; Woerner, D; Ahnert, M; Frehmann, T; Halft, N; Hobus, I; Plattes, M; Spering, V; Winkler, S

2008-01-01

When using dynamic simulation for fine tuning of the design of activated sludge (AS) plants diurnal variations of influent data are required. For this application usually only data from the design process and no measured data are available. In this paper a simple method to generate diurnal variations of wastewater flow and concentrations is described. The aim is to generate realistic influent data in terms of flow, concentrations and TKN/COD ratios and not to predict the influent of the AS plant in detail. The work has been prepared within the framework of HSG-Sim (Hochschulgruppe Simulation, http://www.hsgsim.org), a group of researchers from Germany, Austria, Luxembourg, Poland, the Netherlands and Switzerland. (c) IWA Publishing 2008.

Estimation of evaporation from equilibrium diurnal boundary layer humidity

NASA Astrophysics Data System (ADS)

Salvucci, G.; Rigden, A. J.; Li, D.; Gentine, P.

2017-12-01

Simplified conceptual models of the convective boundary layer as a well mixed profile of potential temperature (theta) and specific humidity (q) impinging on an initially stably stratified linear potential temperature profile have a long history in atmospheric sciences. These one dimensional representations of complex mixing are useful for gaining insights into land-atmosphere interactions and for prediction when state of the art LES approaches are infeasible. As previously shown (e.g. Betts), if one neglects the role of q in bouyancy, the framework yields a unique relation between mixed layer Theta, mixed layer height (h), and cumulative sensible heat flux (SH) throughout the day. Similarly assuming an initially q profile yields a simple relation between q, h, and cumulative latent heat flux (LH). The diurnal dynamics of theta and q are strongly dependent on SH and the initial lapse rates of theta (gamma_thet) and q (gamma q). In the estimation method proposed here, we further constrain these relations with two more assumptions: 1) The specific humidity is the same at the start of the period of boundary layer growth and at the collapse; and 2) Once the mixed layer reaches the LCL, further drying occurs proportionally to the deardorff convective velocity scale (omega) multiplied by q. Assumption (1) is based on the idea that below the cloud layer, there are no sinks of moisture within the mixed layer (neglecting lateral humidity divergence). Thus the net mixing of dry air aloft with evaporation from the surface must balance. Inclusion of the simple model of moisture loss above the LCL into the bulk-CBL model allows definition of an equilibrium humidity (q) condition at which the diurnal cycle of q repeats (i.e. additions of q from surface balance entrainment of dry air from above). Surprisingly, this framework allows estimation of LH from q, theta, and estimated net radiation by solving for the value of Evaporative Fraction (EF) for which the diurnal cycle of q

The effects of feedback lighting on the circadian drinking rhythm in the diurnal new world primate Saimiri sciureus

NASA Technical Reports Server (NTRS)

Ferraro, J. S.; Sulzman, F. M.

1988-01-01

Feedback lighting provides illumination primarily during the subjective night (i.e., the photosensitive portion of the circadian cycle) in response to a given behavior. This technique has previously been used to test the nonparametric model of entrainment in nocturnal rodents. In three species (Rattus norvegicus, Mesocricetus auratus, and Mus musculus), the free-running period of the locomotor activity rhythm was similar whether the animals were exposed to continuous light or discrete light pulses occurring essentially only during the subjective night (i.e., feedback lighting). In the current experiments, feedback lighting was presented to squirrel monkeys so that light fell predominantly during the subjective night. Feedback lighting was linked to the drinking behavior in this diurnal primate so that when the animal drank, the lights went out. Despite the seemingly adverse predicament, the monkeys maintained regular circadian drinking rhythms. Furthermore, just as the period of the free-running activity rhythms of nocturnal rodents exposed to continuous light or feedback lighting were similar, the period of the drinking rhythms of the squirrel monkeys in continuous light and feedback lighting were comparable (25.6 +/- 0.1 and 25.9 +/- 0.1 hours, respectively), despite a substantial decrease in the total amount of light exposure associated with feedback lighting. The free-running period of monkeys exposed to continuous dark (24.5 +/- 0.1 hours) was significantly shorter than either of the two lighting conditions (P < 0.001). The results presented for the drinking rhythm were confirmed by examination of the temperature and activity rhythms. Therefore, discrete light pulses given predominately during the subjective night are capable of simulating the effects of continuous light on the free-running period of the circadian rhythms of a diurnal primate. The response of squirrel monkeys to feedback lighting thus lends further support for the model and suggests that the

Diurnal periodicity of assimilate transport shapes resource allocation and whole-plant carbon balance.

PubMed

Brauner, Katrin; Birami, Benjamin; Brauner, Horst A; Heyer, Arnd G

2018-06-01

Whole-plant carbon balance comprises diurnal fluctuations of photosynthetic carbon gain and respiratory losses, as well as partitioning of assimilates between phototrophic and heterotrophic organs. Because it is difficult to access, the root system is frequently neglected in growth models, or its metabolism is rated based on generalizations from other organs. Here, whole-plant cuvettes were used for investigating total-plant carbon exchange with the environment over full diurnal cycles. Dynamics of primary metabolism and diurnally resolved phloem exudation profiles, as proxy of assimilate transport, were combined to obtain a full picture of resource allocation. This uncovered a strong impact of periodicity of inter-organ transport on the efficiency of carbon gain. While a sinusoidal fluctuation of the transport rate, with minor diel deflections, minimized respiratory losses in Arabidopsis wild-type plants, triangular or rectangular patterns of transport, found in mutants defective in either starch or sucrose metabolism, increased root respiration at the end or beginning of the day, respectively. Power spectral density and cross-correlation analysis revealed that only the rate of starch synthesis was strictly correlated to the rate of net photosynthesis in wild-type, while in a sucrose-phosphate synthase mutant (spsa1), this applied also to carboxylate synthesis, serving as an alternative carbon pool. In the starchless mutant of plastidial phospho-gluco mutase (pgm), none of these rates, but concentrations of sucrose and glucose in the root, followed the pattern of photosynthesis, indicating direct transduction of shoot sugar levels to the root. The results demonstrate that starch metabolism alone is insufficient to buffer diurnal fluctuations of carbon exchange. © 2018 The Authors The Plant Journal © 2018 John Wiley & Sons Ltd.

Calcification responses to diurnal variation in seawater carbonate chemistry by the coral Acropora formosa

NASA Astrophysics Data System (ADS)

Chan, W. Y.; Eggins, S. M.

2017-09-01

Significant diurnal variation in seawater carbonate chemistry occurs naturally in many coral reef environments, yet little is known of its effect on coral calcification. Laboratory studies on the response of corals to ocean acidification have manipulated the carbonate chemistry of experimental seawater to compare calcification rate changes under present-day and predicted future mean pH/Ωarag conditions. These experiments, however, have focused exclusively on differences in mean chemistry and have not considered diurnal variation. The aim of this study was to compare calcification responses of branching coral Acropora formosa under conditions with and without diurnal variation in seawater carbonate chemistry. To achieve this aim, we explored (1) a method to recreate natural diurnal variation in a laboratory experiment using the biological activities of a coral-reef mesocosm, and (2) a multi-laser 3D scanning method to accurately measure coral surface areas, essential to normalize their calcification rates. We present a cost- and time-efficient method of coral surface area estimation that is reproducible within 2% of the mean of triplicate measurements. Calcification rates were compared among corals subjected to a diurnal range in pH (total scale) from 7.8 to 8.2, relative to those at constant pH values of 7.8, 8.0 or 8.2. Mean calcification rates of the corals at the pH 7.8-8.2 (diurnal variation) treatment were not statistically different from the pH 8.2 treatment and were 34% higher than the pH 8.0 treatment despite similar mean seawater pH and Ωarag. Our results suggest that calcification of adult coral colonies may benefit from diurnal variation in seawater carbonate chemistry. Experiments that compare calcification rates at different constant pH without considering diurnal variation may have limitations.

Diurnal behaviour of some salivary parameters in patients with diabetes mellitus (flow rate, pH, thiocianat, LDH activity)--note II.

PubMed

Ionescu, S; Bădiţă, D; Artino, M; Dragomir, M; Huidovici, E; Niţă, V; Chiţoi, E

1998-01-01

The study was performed on 31 diabetic patients of both sexes, divided in 2 groups: group I--17 patients with insulin-dependent diabetes (IDDM) and group II--14 patients with noninsulin-dependent diabetes (NIDDM) and compared with a control group of 16 non-diabetic subjects. Mixed saliva was sampled without stimulation during 2 periods of the day: 07:30-08:00 before breakfast and 17:30-18:00 before dinner. We determined: salivary flow rate, pH with Merck indicator and, after homogenization, the thiocianat with the FeCl3 method and LDH activity (the Norbert method adapted in our laboratory for saliva). Our study showed the same diurnal changes in flow rate and salivary pH in both diabetic and control groups: minimal values in the morning and maximal ones in the afternoon. In non-smoking diabetic patients the salivary thiocianat had maximal values in the morning and minimal ones in the afternoon; similar behaviour, but less obvious was observed in smoking diabetic patients and in the control group regardless of the smoking habit. LDH activity showed unsignificant diurnal variations in the diabetic patients. In the control group we found a significant decrease of LDH activity in the afternoon. The discussion is about the implication of these salivary parameters in the pathology of oral cavity: gingivitis, periodontitis and caries in diabetic patients.

Diurnal variations in CO2 flux from peatland floodplains: Implications for models of ecosystem respiration

NASA Astrophysics Data System (ADS)

Goulsbra, Claire; Rickards, Nathan; Brown, Sarah; Evans, Martin; Boult, Stephen; Alderson, Danielle

2016-04-01

Peatlands are important terrestrial carbon stores, and within these environments, floodplains have been identified as hotspots of carbon processing, potentially releasing substantial amounts of CO2 into the atmosphere. Previous monitoring campaigns have shown that such CO2 release from ecosystem respiration is linked not only to soil temperature and water table depth, but also to CO2 sequestration via primary productivity, thought to be because the root exudates produced during photosynthesis stimulate microbial activity. This suggests that extrapolation models that are parameterised on data collected during day light hours, when vegetation is photosynthesising, may overestimate ecosystem respiration rates at night, which has important implications for estimates of annual CO2 flux and carbon budgeting. To investigate this hypothesis, monitoring data is collected on the CO2 flux from UK peatland floodplains over the full diurnal cycle. This is done via ex-situ manual data collection from mesocosms using an infra-red gas analyser, and the in-situ automated collection of CO2 concentration data from boreholes within the peat using GasClams®. Preliminary data collected during the summer months suggest that night time respiration is suppressed compared to that during the day, and that the significant predictors of respiration are different when examining day and night time data. This highlights the importance of incorporating diurnal variations into models of ecosystem respiration.

Effects of diurnal adjustment on biases and trends derived from inter-sensor calibrated AMSU-A data

NASA Astrophysics Data System (ADS)

Chen, H.; Zou, X.; Qin, Z.

2018-03-01

Measurements of brightness temperatures from Advanced Microwave Sounding Unit-A (AMSU-A) temperature sounding instruments onboard NOAA Polarorbiting Operational Environmental Satellites (POES) have been extensively used for studying atmospheric temperature trends over the past several decades. Intersensor biases, orbital drifts and diurnal variations of atmospheric and surface temperatures must be considered before using a merged long-term time series of AMSU-A measurements from NOAA-15, -18, -19 and MetOp-A.We study the impacts of the orbital drift and orbital differences of local equator crossing times (LECTs) on temperature trends derivable from AMSU-A using near-nadir observations from NOAA-15, NOAA-18, NOAA-19, and MetOp-A during 1998-2014 over the Amazon rainforest. The double difference method is firstly applied to estimation of inter-sensor biases between any two satellites during their overlapping time period. The inter-calibrated observations are then used to generate a monthly mean diurnal cycle of brightness temperature for each AMSU-A channel. A diurnal correction is finally applied each channel to obtain AMSU-A data valid at the same local time. Impacts of the inter-sensor bias correction and diurnal correction on the AMSU-A derived long-term atmospheric temperature trends are separately quantified and compared with those derived from original data. It is shown that the orbital drift and differences of LECTamong different POESs induce a large uncertainty in AMSU-A derived long-term warming/cooling trends. After applying an inter-sensor bias correction and a diurnal correction, the warming trends at different local times, which are approximately the same, are smaller by half than the trends derived without applying these corrections.

Diurnal variations of wildfire emissions in Europe: analysis of the MODIS and SEVIRI measurements in the framework of the regional scale air pollution modelling

NASA Astrophysics Data System (ADS)

Konovalov, Igor B.; Beekmann, Matthias; Kaiser, Johannes W.; Shudyaev, Anton A.; Yurova, Alla; Kuznetsova, Irina N.

2013-04-01

Wildfires episodically provide a major contribution to air pollution in many regions of the world. For example, the extreme air pollution level and strongly reduced visibility were observed in the Central European region of Russia during the intensive wildfire events in summer of 2010. Such episodes provide a strong impetus for further developments in air pollution modeling, aimed at improving the ability of chemistry transport models to simulate and predict evolution of atmospheric composition affected by wildfires. The main goals of our study are (1) to investigate the diurnal cycles of air pollutant emissions from wildfires in several European regions, taking into account the fire radiative power (FRP) satellite measurements for different vegetation land cover types and (2) to examine the possibilities of improving air pollution simulations by assimilating the diurnal variability of the FRP measurements performed by the polar orbiting (MODIS) and geostationary (SEVIRI) satellite instruments into a chemistry transport model. These goals are addressed for the case of wildfires occurred in summer 2010. The analysis of both the MODIS and SEVIRI data indicate that air pollutant emissions from wildfires in Europe in summer 2010 were typically much larger during daytime than during nighttime. The important exception is intensive fires around Moscow, featuring an almost "flat" diurnal cycle. These findings confirm the similar results reported earlier [1] but also extend them by attributing the flat diurnal cycle only to forest fires and by examining a hypothetical association of the "abnormal" diurnal cycle of FRP with peat fires. The derived diurnal variations of wildfire emissions have been used in the framework of the modeling system employed in our previous studies of the atmospheric effects of the 2010 Russian wildfires [2, 3]. The numerical experiments reveal that while the character of the diurnal variation of wildfire emissions has a rather small impact on the

Nocturnal to Diurnal Switches with Spontaneous Suppression of Wheel-Running Behavior in a Subterranean Rodent

PubMed Central

Tachinardi, Patricia; Tøien, Øivind; Valentinuzzi, Veronica S.; Buck, C. Loren; Oda, Gisele A.

2015-01-01

Several rodent species that are diurnal in the field become nocturnal in the lab. It has been suggested that the use of running-wheels in the lab might contribute to this timing switch. This proposition is based on studies that indicate feed-back of vigorous wheel-running on the period and phase of circadian clocks that time daily activity rhythms. Tuco-tucos (Ctenomys aff. knighti) are subterranean rodents that are diurnal in the field but are robustly nocturnal in laboratory, with or without access to running wheels. We assessed their energy metabolism by continuously and simultaneously monitoring rates of oxygen consumption, body temperature, general motor and wheel running activity for several days in the presence and absence of wheels. Surprisingly, some individuals spontaneously suppressed running-wheel activity and switched to diurnality in the respirometry chamber, whereas the remaining animals continued to be nocturnal even after wheel removal. This is the first report of timing switches that occur with spontaneous wheel-running suppression and which are not replicated by removal of the wheel. PMID:26460828

Chronic ethanol consumption disrupts diurnal rhythms of hepatic glycogen metabolism in mice

PubMed Central

Udoh, Uduak S.; Swain, Telisha M.; Filiano, Ashley N.; Gamble, Karen L.; Young, Martin E.

2015-01-01

Chronic ethanol consumption has been shown to significantly decrease hepatic glycogen content; however, the mechanisms responsible for this adverse metabolic effect are unknown. In this study, we examined the impact chronic ethanol consumption has on time-of-day-dependent oscillations (rhythms) in glycogen metabolism processes in the liver. For this, male C57BL/6J mice were fed either a control or ethanol-containing liquid diet for 5 wk, and livers were collected every 4 h for 24 h and analyzed for changes in various genes and proteins involved in hepatic glycogen metabolism. Glycogen displayed a robust diurnal rhythm in the livers of mice fed the control diet, with the peak occurring during the active (dark) period of the day. The diurnal glycogen rhythm was significantly altered in livers of ethanol-fed mice, with the glycogen peak shifted into the inactive (light) period and the overall content of glycogen decreased compared with controls. Chronic ethanol consumption further disrupted diurnal rhythms in gene expression (glycogen synthase 1 and 2, glycogenin, glucokinase, protein targeting to glycogen, and pyruvate kinase), total and phosphorylated glycogen synthase protein, and enzyme activities of glycogen synthase and glycogen phosphorylase, the rate-limiting enzymes of glycogen metabolism. In summary, these results show for the first time that chronic ethanol consumption disrupts diurnal rhythms in hepatic glycogen metabolism at the gene and protein level. Chronic ethanol-induced disruption in these daily rhythms likely contributes to glycogen depletion and disruption of hepatic energy homeostasis, a recognized risk factor in the etiology of alcoholic liver disease. PMID:25857999

Diurnal hydrological physicochemical controls and sampling methods for minor and trace elements in an Alpine glacial hydrological system

NASA Astrophysics Data System (ADS)

Mitchell, Andrew C.; Brown, Giles H.

2007-01-01

SummaryWe present diurnal (i) 0.45 and 0.1 μm pore-size filtered and (ii) operationally defined labile particulate-associated major, minor and trace element concentrations and fluxes in glacial outflow waters draining Haut Glacier d'Arolla, Switzerland. We use speciation modelling (PHREEQCi) and water-suspended sediment interaction experiments are utilised under conditions analogous to the subglacial channellised hydrological system, in order to assess controls on, and the most suitable sampling methods to investigate short-term variations in the mode of major, minor and trace element species export from a glacierised headwater catchment. 0.45 μm pore-size filtered major ions, Sr and U are exported in glacial outflow waters predominately as mobile monovalent or divalent ions or as carbonate complexes, and are controlled by hydrological variations over diurnal cycles, exhibiting an inverse concentration with increasing meltwater discharge. Conversely, 0.45 μm pore-size filtered concentrations of most minor and trace elements ( e.g. Fe, Mn, Co, Ba and Pb) exhibit variations that are not strongly inter-correlated with meltwater discharge or suspended sediment concentrations (SSC) over diurnal periods. The use of 0.45 and 0.1 μm pore-size filter membranes indicates that significant colloidal material is not passing through the 0.45 μm pore-size filters, and these unsystematic variations are not a result of colloid measurement. Speciation modelling applied to meltwaters and observations during water-rock interaction experiments suggest that these unsystematic temporal variations reflect physicochemical controls. This includes sorption, and the oversaturation and precipitation of Fe and Al (oxi)hydroxides, and the co-precipitation of other species. Diurnal pH variations appear important in controlling such short-term physicochemical controls, which limits such species use for hydrological investigations. The percentage of total elemental fluxes exported as the

Diurnal variations of aerosol characteristics at a rural measuring site close to the Ruhr-Area, Germany

NASA Astrophysics Data System (ADS)

Kuhlbusch, T. A. J.; John, A. C.; Fissan, H.

PM10, PM2.5, and Black Carbon (BC) mass concentrations as well as number size distributions were measured quasi-online at a rural sampling site from 18 September to 17 October 1997. Average PM10, PM2.5, and BC mass concentrations were 37 ± 25, 25 ± 23, and 2 ± 1 μgm -3, respectively. All determined aerosol characteristics showed significant diurnal variations with generally higher concentrations during daytime compared to nights. Maxima in mass concentrations were around 11 AM and 8 PM during weekdays, most likely caused by commuter traffic. Decreased mass concentrations, changes in chemical composition and size distribution have been observed for the time from 12 to 5 PM. Diurnal variations of the BC/PM2.5 mass ratio revealed a minimum between 12 and 4 PM. The ratio of particle volume (0.5-2.5 μm) to particle mass (PM2.5) called 'potential density' also showed significant diurnal changes. These changes could be attributed to increasing in mixing height and windspeed. The determined diurnal variations in particle mass, composition, and size distribution may be relevant for epidemiological studies. We propose that diurnally weighted averages of relevant aerosol characteristics, which take diurnal patterns of human activities into account, should be used in epidemiological studies.

Time to decide: Diurnal variations on the speed and quality of human decisions.

PubMed

Leone, María Juliana; Fernandez Slezak, Diego; Golombek, Diego; Sigman, Mariano

2017-01-01

Human behavior and physiology exhibit diurnal fluctuations. These rhythms are entrained by light and social cues, with vast individual differences in the phase of entrainment - referred as an individual's chronotype - ranging in a continuum between early larks and late owls. Understanding whether decision-making in real-life situations depends on the relation between time of the day and an individual's diurnal preferences has both practical and theoretical implications. However, answering this question has remained elusive because of the difficulty of measuring precisely the quality of a decision in real-life scenarios. Here we investigate diurnal variations in decision-making as a function of an individual's chronotype capitalizing on a vast repository of human decisions: online chess servers. In a chess game, every player has to make around 40 decisions using a finite time budget and both the time and quality of each decision can be accurately determined. We found reliable diurnal rhythms in activity and decision-making policy. During the morning, players adopt a prevention focus policy (slower and more accurate decisions) which is later modified to a promotion focus (faster but less accurate decisions), without daily changes in performance. Copyright © 2016 Elsevier B.V. All rights reserved.

Foraging Activity Pattern Is Shaped by Water Loss Rates in a Diurnal Desert Rodent.

PubMed

Levy, Ofir; Dayan, Tamar; Porter, Warren P; Kronfeld-Schor, Noga

2016-08-01

Although animals fine-tune their activity to avoid excess heat, we still lack a mechanistic understanding of such behaviors. As the global climate changes, such understanding is particularly important for projecting shifts in the activity patterns of populations and communities. We studied how foraging decisions vary with biotic and abiotic pressures. By tracking the foraging behavior of diurnal desert spiny mice in their natural habitat and estimating the energy and water costs and benefits of foraging, we asked how risk management and thermoregulatory requirements affect foraging decisions. We found that water requirements had the strongest effect on the observed foraging decisions. In their arid environment, mice often lose water while foraging for seeds and cease foraging even at high energetic returns when water loss is high. Mice also foraged more often when energy expenditure was high and for longer times under high seed densities and low predation risks. Gaining insight into both energy and water balance will be crucial to understanding the forces exerted by changing climatic conditions on animal energetics, behavior, and ecology.

Mesosphere Dynamics with Gravity Wave Forcing. 1; Diurnal and Semi-Diurnal Tides

NASA Technical Reports Server (NTRS)

Mayr, H. G.; Mengel, J. G.; Chan, K. L.; Porter, H. S.; Einaudi, Franco (Technical Monitor)

2000-01-01

We present results from a nonlinear, 3D, time dependent numerical spectral model (NSM), which extends from the ground up into the thermosphere and incorporates Hines' Doppler Spread Parameterization for small-scale gravity waves (GW). Our focal point is the mesosphere that is dominated by wave interactions. We discuss diurnal and semi-diurnal tides ill the present paper (Part 1) and planetary waves in the companion paper (Part 2). To provide an understanding of the seasonal variations of tides, in particular with regard to gravity wave processes, numerical experiments are performed that lead to the following conclusions: 1. The large semiannual variations in tile diurnal tide (DT), with peak amplitudes observed around equinox, are produced primarily by GW interactions that involve, in part, planetary waves. 2. The DT, like planetary waves, tends to be amplified by GW momentum deposition, which reduces also the vertical wavelength. 3.Variations in eddy viscosity associated with GW interactions tend to peak in late spring and early fall and call also influence the DT. 4. The semidiurnal semidiurnal tide (SDT), and its phase in particular, is strongly influenced by the mean zonal circulation. 5. The SDT, individually, is amplified by GW's. But the DT filters out GW's such that the wave interaction effectively reduces the amplitude of the SDT, effectively producing a strong nonlinear interaction between the DT and SDT. 6.) Planetary waves generated internally by baroclinic instability and GW interaction produce large amplitude modulations of the DT and SDT.

Observation of the nearly diurnal resonance of the earth using a laser strainmeter

NASA Technical Reports Server (NTRS)

Levine, J.

1978-01-01

The response of the Earth to the diurnal and semidiurnal tidal excitations was studied. Results show that there is significant structure in the response of the earth to tidal excitations near one cycle/sidereal day. This structure agrees with the resonance behavior predicted from the calculations of the forced elasticgravitational response of an elliptical, rotating earth with a liquid outer core. The data is used to test for possible preferred frames and spatial anisotropies. Upper bounds on the parameterized post-Newtonian (PPN) parameters were examined.

Biotic and abiotic controls on diurnal fluctuations in labile soil phosphorus of a wet tropical forest.

PubMed

Vandecar, Karen L; Lawrence, Deborah; Wood, Tana; Oberbauer, Steven F; Das, Rishiraj; Tully, Katherine; Schwendenmann, Luitgard

2009-09-01

The productivity of many tropical wet forests is generally limited by bioavailable phosphorus (P). Microbial activity is a key regulator of P availability in that it determines both the supply of P through organic matter decomposition and the depletion of bioavailable P through microbial uptake. Both microbial uptake and mineralization occur rapidly, and their net effect on P availability varies with soil moisture, temperature, and soil organic matter quantity and quality. Exploring the mechanisms driving P availability at fine temporal scales can provide insight into the coupling of carbon, water, and nutrient cycles, and ultimately, the response of tropical forests to climate change. Despite the recognized importance of P cycling to the dynamics of wet tropical forests and their potential sensitivity to short-term fluctuations in bioavailable P, the diurnal pattern of P remains poorly understood. This study quantifies diurnal fluctuations in labile soil P and evaluates the importance of biotic and abiotic factors in driving these patterns. To this end, measurements of labile P were made every other hour in a Costa Rican wet tropical forest oxisol. Spatial and temporal variation in Bray-extractable P were investigated in relation to ecosystem carbon flux, soil CO2 efflux, soil moisture, soil temperature, solar radiation, and sap-flow velocity. Spatially averaged bi-hourly (every two hours) labile P ranged from 0.88 to 2.48 microg/g across days. The amplitude in labile P throughout the day was 0.61-0.82 microg/g (41-54% of mean P concentrations) and was characterized by a bimodal pattern with a decrease at midday. Labile P increased with soil CO2 efflux and soil temperature and declined with increasing sap flow and solar radiation. Together, soil CO2 efflux, soil temperature, and sap flow explained 86% of variation in labile P.

Butterfly Diagram and Activity Cycles in HR 1099

NASA Astrophysics Data System (ADS)

Berdyugina, Svetlana V.; Henry, Gregory W.

2007-04-01

We analyze photometric data of the active RS CVn-type star HR 1099 for the years 1975-2006 with an inversion technique and reveal the nature of two activity cycles of 15-16 yr and 5.3+/-0.1 yr duration. The 16 yr cycle is related to variations of the total spot area and is coupled with the differential rotation, while the 5.3 yr cycle is caused by the symmetric redistribution of the spotted area between the opposite stellar hemispheres (flip-flop cycle). We recover long-lived active regions comprising two active longitudes that migrate in the orbital reference frame with a variable rate because of the differential rotation along with changes in the mean spot latitudes. The migration pattern is periodic with the 16 yr cycle. Combining the longitudinal migration of the active regions with a previously measured differential rotation law, we recover the first stellar butterfly diagram without an assumption about spot shapes. We find that mean latitudes of active regions at opposite longitudes change antisymmetrically in the course of the 16 yr cycle: while one active region migrates to the pole, the other approaches the equator. This suggests a precession of the global magnetic field with respect to the stellar rotational axis.

Diurnal depression in leaf hydraulic conductance at ambient and elevated [CO2] reveals anisohydric water management in field-grown soybean

USDA-ARS?s Scientific Manuscript database

Diurnal cycles of photosynthesis and water use in field-grown soybean (Glycine max) are tied to light intensity and vapor pressure deficit (VPD). At high mid-day VPD, transpiration rates can lead to a decline in leaf water potential if leaf hydraulic conductance is insufficient to supply water to in...

Tracking diurnal changes of photosynthesis and evapotranspiration using fluorescence, gas exchange and hyperspectral remote sensing measurements

NASA Astrophysics Data System (ADS)

Wang, S.; Zhang, L.; Guanter, L.; Huang, C.

2017-12-01

Photosynthesis and evapotranspiration (ET) are the two most important activities of vegetation and make a great contribution to carbon, water and energy exchanges. Remote sensing provides opportunities for monitoring these processes across time and space. This study focuses on tracking diurnal changes of photosynthesis and evapotranspiration over soybean using multiple measurement techniques. Diurnal changes of both remote sensing-based indicators, including active and passive chlorophyll fluorescence and biophysical-related parameters, including photosynthesis rate (photo) and leaf stomatal conductance (cond), were observed. Results showed that both leaf-level steady-state fluorescence (Fs) and canopy-level solar-induced chlorophyll fluorescence were linearly correlated to photosynthetically active radiation (PAR) during the daytime. A double-peak diurnal change curve was observed for leaf-level photo and cond but not for Fs or SIF. Photo and cond showed a strong nonlinear (second-order) correlation, indicating that photosynthesis, which might be remotely sensed by SIF, has the opportunity to track short-term changes of ET. Results presented in this report will be helpful for better understanding the relationship between remote-sensing-based indices and vegetation's biophysical processes.

The influence of diurnal temperatures on the hydrochemistry of a tufa-depositing stream

NASA Astrophysics Data System (ADS)

Drysdale, R.; Lucas, S.; Carthew, K.

2003-12-01

At-a-station diurnal variations in carbonate hydrochemistry were measured during four observation periods at Davys Creek, a tufa-depositing stream in central NSW, Australia. Major ion concentrations and continuously logged measurements of specific conductivity, pH and temperature showed that changes in the amount of CaCO3 deposited upstream of the study reach were directly related to changes in diurnal water temperatures, which control the rate of CO2 efflux to the atmosphere. The greatest upstream losses occurred during the mid-afternoon water temperature peak, whereas the lowest upstream losses occurred at sunrise, when water temperatures were at their lowest. Cloudy days at all times of the year produced small diurnal water temperatures ranges (c. 2-5°C) and, consequently, relatively small changes in upstream CaCO3 loss (23-50 mg L-1) through the day. Clear sunny days, especially during summer months, produced large diurnal water temperature changes (up to c. 11°C), which in turn triggered diurnal changes in upstream CaCO3 loss of up to 100 mg L-1. By implication, the active reach of tufa deposition must advance downstream and increase in length during the evening and vice versa during the day. Given that the temperature of Davys Creek waters are a function of insolation, changes in the reach of tufa deposition under baseflow conditions are a direct function of the prevailing weather. This has implications for the palaeoclimatic interpretation of fossil tufa deposits. Copyright

The diurnal patterns of cortisol and dehydroepiandrosterone in relation to intense aerobic exercise in recreationally trained soccer players.

PubMed

Labsy, Z; Prieur, F; Le Panse, B; Do, M C; Gagey, O; Lasne, F; Collomp, K

2013-03-01

Diurnal patterns of cortisol and dehydroepiandrosterone (DHEA) secretion, the two main peripheral secretory products of the hypothalamic-pituitary-adrenal neuroendocrine stress axis, have been well characterized in rest conditions but not in relation to physical exercise. The purpose of this investigation was therefore to determine the effects of an intense 90-min aerobic exercise on the waking diurnal cortisol and DHEA cycles on three separate days [without exercise, with morning exercise (10:00-11:30 h), and with afternoon exercise (14:00-15:30 h)] in nine recreationally trained soccer players. Saliva samples were collected at awakening, 30 min after awakening, and then every 2 h from 08:00 to 22:00 h. A burst of secretory activity was found for cortisol (p < 0.01) but not for DHEA after awakening. Overall, diurnal decline for both adrenal steroids was observed on resting and exercise days under all conditions. However, there was a significant increase in salivary cortisol concentrations on the morning-exercise and afternoon-exercise days at, respectively, 12:00 h (p < 0.05) and 16:00 h (p < 0.01), versus the other trials. This acute response to exercise was not evident for DHEA. The results of this investigation indicate that 90 min of intense aerobic exercise does not affect the circadian pattern of salivary adrenal steroids in recreationally trained athletes over a 16-h waking period, despite a transitory increase in post-exercise cortisol concentration. Further studies are necessary to determine whether these results are applicable to elite athletes or patients with cortisol or DHEA deficiency.

Diurnal variations of dissolved and colloidal organic carbon and trace metals in a boreal lake during summer bloom.

PubMed

Pokrovsky, O S; Shirokova, L S

2013-02-01

This work describes variation of element concentration in surface water of a subarctic organic-rich lake during the diurnal cycle of photosynthesis. An unusually hot summer 2010 in European part of subarctic Russia produced elevated surface water temperature (28-30 °C) and caused massive cyanobacterial bloom. Diurnal variation of ~40 dissolved macro and trace elements and organic carbon were recorded in the humic Lake Svyatoe in the White Sea drainage basin. Two days continuous measurements with 3 h sampling steps at the surface (0.5 m) allowed tracing cyanobacterial activity via pH and O₂ measurement and revealed constant concentrations (within ±20-30%) of all major elements (Na, Mg, Cl, SO₄, K, Ca), organic and inorganic carbon and most trace elements (Li, B, Sc, Ti, Ni, Cu, Ga, As, Rb, Sr, Y, Zr, Mo, Sb, medium and heavy REEs, Hf, Pb, Th, U). The concentration of Mn demonstrated a factor of 3 decrease during the day following Mn adsorption onto cyanobacterial cells due to ~1 pH unit raise during the photosynthesis and Mn release during the night due to desorption from the cell surface. The role of Mn(II) photo-oxidation by reactive oxygen species could be also pronounced, although its contribution to Mn diurnal variation was much smaller than the adsorption at the cell surfaces. Similar pattern, but with much lesser variations (c.a., 10-20%), was recorded for Ba and Fe. On-site ultrafiltration technique allowed to distinguish between low molecular weight (LMW) complexes (<1 kDa) and high molecular weight (HMW) colloids (1 kDa-0.22 μm) and to assess their diurnal pattern. Colloidal Al and Fe were the highest during the night, when the contribution of HMW allochthonous colloids was maximal. Typical insoluble trivalent and tetravalent elements exhibited constant complexation (>80-90%) with HMW allochthonous organics, independent on the diel photosynthetic cycle. Finally, biologically-relevant metals (Cu, Co, Cr, V, and Ni) demonstrated significant variations

Diurnal pattern in nitrous oxide emissions from a sewage-enriched river.

PubMed

Xia, Yongqiu; Li, Yuefei; Li, Xiaobo; Guo, Miao; She, Dongli; Yan, Xiaoyuan

2013-07-01

Estimates of N2O emission based on limit measurements could be highly inaccurate because of considerable diurnal variations in N2O flux due to rapid transformation of nutrients and diel change of dissolved oxygen (DO). In the present study, the N2O fluxes, dissolved N2O concentrations, and the controlling variables were measured hourly for 3d and night cycles at five sites on a typically sewage-enriched river in the Taihu region. There were no significant diurnal patterns in N2O emissions and dissolved N2O saturation, with respective mean value of 56.1μg N2O-Nm(-2)h(-1) (range=41.1μg N2O-Nm(-2)h(-1) to 87.7μg N2O-Nm(-2)h(-1)) and 813% (range=597-1372%), though distinct diurnal patterns were observed in DO concentration and river chemistry. However, the mean N2O emissions and the mean dissolved N2O saturation during the day (61.7μgNm(-2)h(-1) for N2O fluxes and 0.52μgNL(-1) for dissolved N2O saturation) were significantly higher than those during the night (50.1μgNm(-2)h(-1)for N2O fluxes and 0.44μgNL(-1) for dissolved N2O saturation). Factors controlling the N2O flux were pH, DO, NH4(+),SO4(2-), air temperature, and water temperature. Sampling at 19:00h could well represent the daily average N2O flux at the studied river. Copyright © 2013 Elsevier Ltd. All rights reserved.

The roles of negative affect and goal adjustment capacities in breast cancer survivors: Associations with physical activity and diurnal cortisol secretion.

PubMed

Castonguay, Andree L; Wrosch, Carsten; Sabiston, Catherine M

2017-04-01

This study examined whether within-person changes of breast cancer survivors' high-arousal negative affect (e.g., feeling scared, upset, anxious, or guilty) could predict high levels of diurnal cortisol secretion and moderate-to-vigorous physical activity (MVPA). In addition, goal adjustment capacities (goal disengagement and goal reengagement) were expected to buffer the effect of negative affect on cortisol and to increase its effect on MVPA. High-arousal negative affect, self-reported MVPA, area-under-the-curve of diurnal cortisol secretion, and goal adjustment capacities were assessed in a longitudinal sample of 145 female breast cancer survivors. Based on hierarchical linear modeling, breast cancer survivors reported increased levels of both MVPA and cortisol secretion if they experienced higher (as compared with lower) levels of high-arousal negative affect than their personal average. Furthermore, within-person negative affect was associated with: (a) higher MVPA among participants with high (but not low) goal reengagement capacities; and (b) elevated cortisol secretion among participants with low (but not high) goal reengagement capacities. High-arousal negative affect may exert differing functions among breast cancer survivors in that it can trigger adaptive health behaviors, yet simultaneously elevate diurnal cortisol secretion. In addition, being able to engage in new goals may be a necessary condition for breast cancer survivors to experience the beneficial behavioral effects of high-arousal negative affect, and it may prevent the adverse effect of negative affect on enhanced cortisol output. (PsycINFO Database Record (c) 2017 APA, all rights reserved).

Spotting stellar activity cycles in Gaia astrometry

NASA Astrophysics Data System (ADS)

Morris, Brett M.; Agol, Eric; Davenport, James R. A.; Hawley, Suzanne L.

2018-06-01

Astrometry from Gaia will measure the positions of stellar photometric centroids to unprecedented precision. We show that the precision of Gaia astrometry is sufficient to detect starspot-induced centroid jitter for nearby stars in the Tycho-Gaia Astrometric Solution (TGAS) sample with magnetic activity similar to the young G-star KIC 7174505 or the active M4 dwarf GJ 1243, but is insufficient to measure centroid jitter for stars with Sun-like spot distributions. We simulate Gaia observations of stars with 10 year activity cycles to search for evidence of activity cycles, and find that Gaia astrometry alone likely cannot detect activity cycles for stars in the TGAS sample, even if they have spot distributions like KIC 7174505. We review the activity of the nearby low-mass stars in the TGAS sample for which we anticipate significant detections of spot-induced jitter.

Changing patterns of daily rhythmicity across reproductive states in diurnal female Nile grass rats (Arvicanthis niloticus)

PubMed Central

Schradera, Jessica A.; Walaszczykb, Erin J.; Smalea, Laura

2009-01-01

SCHRADER, J.A., E. J. WALASZCZYK, AND L. SMALE. Changing patterns of daily rhythmicity across reproductive states in diurnal female Nile grass rats (Arvicanthis niloticus). PHYSIOL BEHAV XX(X) XXX-XXX, XXXX. -- A suite of changes in circadian rhythms have been described in nocturnal rodents as females go through pregnancy and lactation, but there is no information on such patterns in diurnal species. As the challenges faced by these two groups of animals are somewhat different, we characterized changes in activity and core body temperature (Tb) in female diurnal Nile grass rats (Arvicanthis niloticus) as they went through a series of reproductive states: virgin, pregnant, pregnant and lactating, lactating only, and post-weaning. The phase of neither rhythm varied, but the amplitude did. Females increased their overall levels of daily activity from early to late pregnancy, regardless of whether they were also lactating. The pattern of activity was less rhythmic during early than mid-lactation, in both non-pregnant and pregnant females, as a consequence of a decrease in daytime relative to nighttime activity. The Tb rhythm amplitude dropped from mid-pregnancy through mid-lactation, and there were rises in Tb troughs during the mid-light and mid-dark phases of the day, though pregnancy and lactation affected Tb at these times in somewhat different ways. This study demonstrates that rhythms in diurnal grass rats change during pregnancy and lactation in different ways than those of nocturnal species that have been studied to date and that the effects of pregnancy and lactation are not additive in any simple way. PMID:19744504

Impaired Production and Diurnal Regulation of Vascular RvDn-3 DPA Increase Systemic Inflammation and Cardiovascular Disease.

PubMed

Colas, Romain A; Souza, Patricia R; Walker, Mary E; Burton, Maudrian; Zasłona, Zbigniew; Curtis, Annie M; Marques, Raquel M; Dalli, Jesmond

2018-03-16

Diurnal mechanisms are central to regulating host responses. Recent studies uncovered a novel family of mediators termed as specialized proresolving mediators that terminate inflammation without interfering with the immune response. Herein, we investigated the diurnal regulation of specialized proresolving mediators in humans and their role in controlling peripheral blood leukocyte and platelet activation. Using lipid mediator profiling and healthy volunteers, we found that plasma concentrations of n-3 docosapentaenoic acid-derived D-series resolvins (RvD n-3 DPA ) were regulated in a diurnal manner. The production and regulation of these mediators was markedly altered in patients at risk of myocardial infarct. These changes were associated with decreased 5-lipoxygenase expression and activity, as well as increased systemic adenosine concentrations. We also found a significant negative correlation between plasma RvD n-3 DPA and markers of platelet, monocyte, and neutrophil activation, including CD63 and CD11b. Incubation of RvD n-3 DPA with peripheral blood from healthy volunteers and patients with cardiovascular disease significantly and dose-dependently decreased platelet and leukocyte activation. Furthermore, administration of RvD5 n-3 DPA to ApoE -/- (apolipoprotein E deficient) mice significantly reduced platelet-leukocyte aggregates, vascular thromboxane B 2 concentrations, and aortic lesions. These results demonstrate that peripheral blood RvD n-3 DPA are diurnally regulated in humans, and dysregulation in the production of these mediators may lead to cardiovascular disease. © 2018 The Authors.

Diurnal depression in leaf hydraulic conductance at ambient and elevated [CO2] and reveals anisohydric water management in field-grown soybean

USDA-ARS?s Scientific Manuscript database

Diurnal cycles of photosynthesis and water use in field-grown soybean (Glycine max) are tied to light intensity and vapor pressure deficit (VPD). At high mid-day VPD, transpiration rates can lead to a decline in leaf water potential ('leaf) if leaf hydraulic conductance (Kleaf) is insufficient to su...

Dim nighttime light impairs cognition and provokes depressive-like responses in a diurnal rodent.

PubMed

Fonken, Laura K; Kitsmiller, Emily; Smale, Laura; Nelson, Randy J

2012-08-01

Circadian disruption is a common by-product of modern life. Although jet lag and shift work are well-documented challenges to circadian organization, many more subtle environmental changes cause circadian disruption. For example, frequent fluctuations in the timing of the sleep/wake schedule, as well as exposure to nighttime lighting, likely affect the circadian system. Most studies of these effects have focused on nocturnal rodents, which are very different from diurnal species with respect to their patterns of light exposure and the effects that light can have on their activity. Thus, the authors investigated the effect of nighttime light on behavior and the brain of a diurnal rodent, the Nile grass rat. Following 3 weeks of exposure to standard light/dark (LD; 14:10 light [~150 lux] /dark [0 lux]) or dim light at night (dLAN; 14:10 light [~150 lux] /dim [5 lux]), rats underwent behavioral testing, and hippocampal neurons within CA1, CA3, and the dentate gyrus (DG) were examined. Three behavioral effects of dLAN were observed: (1) decreased preference for a sucrose solution, (2) increased latency to float in a forced swim test, and (3) impaired learning and memory in the Barnes maze. Light at night also reduced dendritic length in DG and basilar CA1 dendrites. Dendritic length in the DG positively correlated with sucrose consumption in the sucrose anhedonia task. Nighttime light exposure did not disrupt the pattern of circadian locomotor activity, and all grass rats maintained a diurnal activity pattern. Together, these data suggest that exposure to dLAN can alter affective responses and impair cognition in a diurnal animal.

Altered Electroencephalographic Activity Associated with Changes in the Sleep-Wakefulness Cycle of C57BL/6J Mice in Response to a Photoperiod Shortening

PubMed Central

Rozov, Stanislav V.; Zant, Janneke C.; Gurevicius, Kestutis; Porkka-Heiskanen, Tarja; Panula, Pertti

2016-01-01

Aim: Under natural conditions diurnal rhythms of biological processes of the organism are synchronized with each other and to the environmental changes by means of the circadian system. Disturbances of the latter affect hormonal levels, sleep-wakefulness cycle and cognitive performance. To study mechanisms of such perturbations animal models subjected to artificial photoperiods are often used. The goal of current study was to understand the effects of circadian rhythm disruption, caused by a short light-dark cycle regime, on activity of the cerebral cortex in rodents. Methods: We used electroencephalogram to assess the distribution of vigilance states, perform spectral analysis, and estimate the homeostatic sleep drive. In addition, we analyzed spontaneous locomotion of C57BL/6J mice under symmetric, 22-, 21-, and 20-h-long light–dark cycles using video recording and tracking methods. Results and Conclusions: We found that shortening of photoperiod caused a significant increase of slow wave activity during non-rapid eye movement sleep suggesting an elevation of sleep pressure under such conditions. While the rhythm of spontaneous locomotion was completely entrained by all light–dark cycles tested, periodic changes in the power of the θ- and γ-frequency ranges during wakefulness gradually disappeared under 22- and 21-h-long light–dark cycles. This was associated with a significant increase in the θ–γ phase-amplitude coupling during wakefulness. Our results thus provide deeper understanding of the mechanisms underlying the impairment of learning and memory retention, which is associated with disturbed circadian regulation. PMID:27630549

Diurnal blood pressure variation in quadriplegic chronic spinal cord injury patients.

PubMed

Krum, H; Louis, W J; Brown, D J; Jackman, G P; Howes, L G

1991-03-01

1. Measurement of blood pressure and heart rate over a 24 h period was performed in 10 quadriplegic spinal cord injury patients and 10 immobilized, neurologically intact orthopaedic subjects by using the Spacelabs 90207 automated ambulatory monitoring system. 2. Systolic and diastolic blood pressure fell significantly at night in orthopaedic subjects but not in quadriplegic patients, and night-time blood pressures were similar in both groups. 3. Cumulative summation of differences from a reference value (cusum analysis) confirmed a markedly diminished diurnal blood pressure variation in the quadriplegic patients. 4. These findings could not be accounted for on the basis of blood pressure variations during chronic postural change. 5. Heart rate fell significantly at night in both groups. 6. The findings suggest that the increase in blood pressure during waking hours in neurologically intact subjects is a consequence of a diurnal variation in sympathetic activity (absent in quadriplegic patients with sympathetic decentralization) which is independent of changes in physical activity.

How active was solar cycle 22?

NASA Technical Reports Server (NTRS)

Hoegy, W. R.; Pesnell, W. D.; Woods, T. N.; Rottman, G. J.

1993-01-01

Solar EUV observations from the Langmuir probe on Pioneer Venus Orbiter suggest that at EUV wavelengths solar cycle 22 was more active than solar cycle 21. The Langmuir probe, acting as a photodiode, measured the integrated solar EUV flux over a 13 1/2 year period from January 1979 to June 1992, the longest continuous solar EUV measurement. The Ipe EUV flux correlated very well with the SME measurement of L-alpha during the lifetime of SME and with the UARS SOLSTICE L-alpha from October 1991 to June 1992 when the Ipe measurement ceased. Starting with the peak of solar cycle 21, there was good general agreement of Ipe EUV with the 10.7 cm, Ca K, and He 10830 solar indices, until the onset of solar cycle 22. From 1989 to the start of 1992, the 10.7 cm flux exhibited a broad maximum consisting of two peaks of nearly equal magnitude, whereas Ipe EUV exhibited a strong increase during this time period making the second peak significantly higher than the first. The only solar index that exhibits the same increase in solar activity as Ipe EUV and L-alpha during the cycle 22 peak is the total magnetic flux. The case for high activity during this peak is also supported by the presence of very high solar flare intensity.

Diurnal changes in glutamate + glutamine levels of healthy young adults assessed by proton magnetic resonance spectroscopy.

PubMed

Volk, Carina; Jaramillo, Valeria; Merki, Renato; O'Gorman Tuura, Ruth; Huber, Reto

2018-06-08

The glutamatergic α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid (AMPA) receptor is involved in synaptic plasticity processes, and animal studies have demonstrated altered expression across the sleep wake cycle. Accordingly, glutamate levels are reduced during non-rapid eye movement (NREM) sleep and the rate of this decrease is positively correlated with sleep EEG slow wave activity (SWA). Here, we combined proton magnetic resonance spectroscopy ( 1 H-MRS) and high-density sleep EEG to assess if 1 H-MRS is sensitive to diurnal changes of glutamate + glutamine (GLX) in healthy young adults and if potential overnight changes of GLX are correlated to SWA. 1 H-MRS was measured in the parietal lobe in the evening and in the subsequent morning. High-density sleep EEG was recorded overnight between the evening and morning scans. Our results revealed a significant overnight reduction in GLX, but no significant changes in other metabolites. The decrease in GLX positively correlated with the decrease of SWA. Our study demonstrates that quantification of diurnal changes in GLX is possible by means of 1 H-MRS and indicates that overnight changes in GLX are related to SWA, a marker that is closely linked to the restorative function of sleep. This relationship might be of particular interest in clinical populations in which sleep is disturbed. © 2018 Wiley Periodicals, Inc.

Influence of abiotic factors on cathemeral activity: the case of Eulemur fulvus collaris in the littoral forest of Madagascar.

PubMed

Donati, Giuseppe; Borgognini-Tarli, Silvana M

2006-01-01

The role environmental factors play in influencing circadian rhythms in natural habitats is still poorly described in primates, especially for those taxa with an activity cycle extended over the 24-hour cycle. In this paper, we elucidate the importance of abiotic factors in entraining the activity of cathemeral primates, focussing on results from a long-term study of Eulemur fulvus collaris (collared brown lemur) in south-eastern Malagasy littoral forest. Two groups of lemurs were followed for 60 whole-day and 59 whole-night observation periods over 14 months. Diurnal and nocturnal observations were equally distributed among moon phases and seasons. Temperature and humidity were recorded hourly by automatic data loggers. The littoral forest has a climatic environment where rainfall and humidity are uncorrelated with temperature and photoperiod. Diurnal and nocturnal activity varied seasonally, with the former increasing significantly with extended day length and the latter increasing significantly with shortened day length. Dusk seemed to act as a primary zeitgeber for these lemurs, coordinating the onset of evening activity throughout the entire year. Lunar phase and the nocturnal luminosity index correlated positively with the duration of nocturnal activity and negatively with the length of diurnal activity. Temperature was positively associated with diurnal activity but did not seem to influence lemur rhythms at night. Finally, lemur nocturnal activity significantly decreased when levels of humidity and rainfall were high. Cathemeral biorhythm is triggered by zeitgebers and influenced by masking factors. The activity of collared brown lemurs appears to be seasonally influenced by photoperiod and directly modulated by nocturnal ambient luminosity. These results are discussed by comparing data from other cathemeral species living in various climatic situations. Copyright (c) 2006 S. Karger AG, Basel.

Diurnal Emotional States Impact the Sleep Course

PubMed Central

Delannoy, Julien; Mandai, Osamu; Honoré, Jacques; Kobayashi, Toshinori; Sequeira, Henrique

2015-01-01

Background Diurnal emotional experiences seem to affect several characteristics of sleep architecture. However, this influence remains unclear, especially for positive emotions. In addition, electrodermal activity (EDA), a sympathetic robust indicator of emotional arousal, differs depending on the sleep stage. The present research has a double aim: to identify the specific effects of pre-sleep emotional states on the architecture of the subsequent sleep period; to relate such states to the sympathetic activation during the same sleep period. Methods Twelve healthy volunteers (20.1 ± 1.0 yo.) participated in the experiment and each one slept 9 nights at the laboratory, divided into 3 sessions, one per week. Each session was organized over three nights. A reference night, allowing baseline pre-sleep and sleep recordings, preceded an experimental night before which participants watched a negative, neutral, or positive movie. The third and last night was devoted to analyzing the potential recovery or persistence of emotional effects induced before the experimental night. Standard polysomnography and EDA were recorded during all the nights. Results Firstly, we found that experimental pre-sleep emotional induction increased the Rapid Eye Movement (REM) sleep rate following both negative and positive movies. While this increase was spread over the whole night for positive induction, it was limited to the second half of the sleep period for negative induction. Secondly, the valence of the pre-sleep movie also impacted the sympathetic activation during Non-REM stage 3 sleep, which increased after negative induction and decreased after positive induction. Conclusion Pre-sleep controlled emotional states impacted the subsequent REM sleep rate and modulated the sympathetic activity during the sleep period. The outcomes of this study offer interesting perspectives related to the effect of diurnal emotional influences on sleep regulation and open new avenues for potential

Continuous exposure to a novel stressor based on water aversion induces abnormal circadian locomotor rhythms and sleep-wake cycles in mice.

PubMed

Miyazaki, Koyomi; Itoh, Nanako; Ohyama, Sumika; Kadota, Koji; Oishi, Katsutaka

2013-01-01

Psychological stressors prominently affect diurnal rhythms, including locomotor activity, sleep, blood pressure, and body temperature, in humans. Here, we found that a novel continuous stress imposed by the perpetual avoidance of water on a wheel (PAWW) affected several physiological diurnal rhythms in mice. One week of PAWW stress decayed robust circadian locomotor rhythmicity, while locomotor activity was evident even during the light period when the mice are normally asleep. Daytime activity was significantly upregulated, whereas nighttime activity was downregulated, resulting in a low amplitude of activity. Total daily activity gradually decreased with increasing exposure to PAWW stress. The mice could be exposed to PAWW stress for over 3 weeks without adaptation. Furthermore, continuous PAWW stress enhanced food intake, but decreased body weight and plasma leptin levels, indicating that sleep loss and PAWW stress altered the energy balance in these mice. The diurnal rhythm of corticosterone levels was not severely affected. The body temperature rhythm was diurnal in the stressed mice, but significantly dysregulated during the dark period. Plasma catecholamines were elevated in the stressed mice. Continuous PAWW stress reduced the duration of daytime sleep, especially during the first half of the light period, and increased nighttime sleepiness. Continuous PAWW stress also simultaneously obscured sleep/wake and locomotor activity rhythms compared with control mice. These sleep architecture phenotypes under stress are similar to those of patients with insomnia. The stressed mice could be entrained to the light/dark cycle, and when they were transferred to constant darkness, they exhibited a free-running circadian rhythm with a timing of activity onset predicted by the phase of their entrained rhythms. Circadian gene expression in the liver and muscle was unaltered, indicating that the peripheral clocks in these tissues remained intact.

Diurnal variability in carbon and nitrogen pools within Chesapeake Bay and northern Gulf of Mexico: implications for future ocean color satellite sensors

NASA Astrophysics Data System (ADS)

Mannino, A.; Novak, M. G.; Tzortziou, M.; Salisbury, J.

2016-02-01

Relative to their areal extent, estuaries and coastal ocean ecosystems contribute disproportionately more to global biogeochemical cycling of carbon, nitrogen and other elements compared to the open ocean. Applying ocean color satellite data to study biological and biogeochemical processes within coastal ecosystems is challenging due to the complex mixtures of aquatic constituents derived from terrestrial, anthropogenic, and marine sources, human-impacted atmospheric properties, presence of clouds during satellite overpass, fine-scale spatial gradients, and time-varying processes on diurnal scales that cannot be resolved with current sensors. On diurnal scales, biological, photochemical, and biogeochemical processes are regulated by the variation in solar radiation. Other physical factors, such as tides, river discharge, estuarine and coastal ocean circulation, wind-driven mixing, etc., impart further variability on biological and biogeochemical processes on diurnal to multi-day time scales. Efforts to determine the temporal frequency required from a NASA GEO-CAPE ocean color satellite sensor to discern diurnal variability C and N stocks, fluxes and productivity culminated in field campaigns in the Chesapeake Bay and northern Gulf of Mexico. Near-surface drogues were released and tracked in quasi-lagrangian space to monitor hourly changes in community production, C and N stocks, and optical properties. While only small diurnal changes were observed in dissolved organic carbon (DOC) and colored dissolved organic matter (CDOM) absorption in Chesapeake Bay, substantial variation in particulate organic carbon (POC) and nitrogen (PN), chlorophyll-a, and inorganic nitrogen (DIN) were measured. Similar or greater diurnal changes in POC, PN, chlorophyll-a and DIN were found in Gulf of Mexico nearshore and offshore sites. These results suggest that satellite observations at hourly frequency are desirable to capture diurnal variability in carbon and nitrogen stocks, fluxes

Analysis of diurnal and seasonal climate patterns in the Rwenzori Mountains, East Africa, using satellite data and models

NASA Astrophysics Data System (ADS)

Cavagnaro, D. B.; Doughty, A. M.; Hatchett, B.

2016-12-01

The Rwenzori Mountains of Uganda and Democratic Republic of the Congo are one of only three remaining glaciated sites in Africa. Because of their remoteness and sparsity of meteorological data, the climate patterns are not well-known or well understood, which may lead to high uncertainty in glacier mass-balance estimates and paleoclimate reconstructions. This project uses remotely-sensed precipitation data, automatic weather station data, and back-trajectory modeling of air parcels to characterize the diurnal and seasonal climate patterns at the Rwenzori. Of the two wet seasons, we estimate that the short-rains (SON) provide up to 500% more snow accumulation. Precipitation is highly diurnal and driven by convection to the east of the Rwenzori as well as local up-valley convection (Mölg et al., 2003). Back-trajectory modeling shows that precipitation tends to occur at the Rwenzori when airstreams are able to pick up moisture during peak daytime convection on the East African Plateau the day before arriving at the Rwenzori. This relationship is supported by the fact that precipitation rates at the western end of the plateau follow a stronger diurnal cycle than precipitation rates at the eastern end, at Mount Kenya.

Automated Video Analysis System Reveals Distinct Diurnal Behaviors in C57BL/6 and C3H/HeN Mice

PubMed Central

Adamah-Biassi, E. B.; Stepien, I.; Hudson, R.L.; Dubocovich, M.L.

2013-01-01

Advances in rodent behavior dissection using automated video recording and analysis allows detailed phenotyping. This study compared and contrasted 15 diurnal behaviors recorded continuously using an automated behavioral analysis system for a period of 14 days under a 14/10 light/dark cycle in single housed C3H/HeN (C3H) or C57BL/6 (C57) male mice. Diurnal behaviors, recorded with minimal experimental interference and analyzed using phenotypic array and temporal distribution analysis showed bimodal and unimodal profiles in the C57 and C3H mice, respectively. Phenotypic array analysis revealed distinct behavioral rhythms in activity-like behaviors (i.e. walk, hang, jump, come down) (ALB), exploration-like behaviors (i.e. dig, groom, rear up, sniff, stretch) (ELB), ingestion-like behaviors (i.e. drink, eat) (ILB) and resting-like behaviors (i.e. awake, remain low, rest, twitch) (RLB) of C3H and C57 mice. Temporal analysis demonstrated that strain and time of day affects the magnitude and distribution of the spontaneous homecage behaviors. Wheel running activity, water and food measurements correlated with timing of homecage behaviors. Subcutaneous (3 mg/kg, sc) or oral (0.02 mg/ml, oral) melatonin treatments in C57 mice did not modify either the total 24 hr magnitude or temporal distribution of homecage behaviors when compared with vehicle treatments. We conclude that C3H and C57 mice show different spontaneous activity and behavioral rhythms specifically during the night period which are not modulated by melatonin. PMID:23337734

Automated video analysis system reveals distinct diurnal behaviors in C57BL/6 and C3H/HeN mice.

PubMed

Adamah-Biassi, E B; Stepien, I; Hudson, R L; Dubocovich, M L

2013-04-15

Advances in rodent behavior dissection using automated video recording and analysis allows detailed phenotyping. This study compared and contrasted 15 diurnal behaviors recorded continuously using an automated behavioral analysis system for a period of 14 days under a 14/10 light/dark cycle in single housed C3H/HeN (C3H) or C57BL/6 (C57) male mice. Diurnal behaviors, recorded with minimal experimental interference and analyzed using phenotypic array and temporal distribution analysis showed bimodal and unimodal profiles in the C57 and C3H mice, respectively. Phenotypic array analysis revealed distinct behavioral rhythms in Activity-Like Behaviors (i.e. walk, hang, jump, come down) (ALB), Exploration-Like Behaviors (i.e. dig, groom, rear up, sniff, stretch) (ELB), Ingestion-Like Behaviors (i.e. drink, eat) (ILB) and Resting-Like Behaviors (i.e. awake, remain low, rest, twitch) (RLB) of C3H and C57 mice. Temporal distribution analysis demonstrated that strain and time of day affects the magnitude and distribution of the spontaneous homecage behaviors. Wheel running activity, water and food measurements correlated with timing of homecage behaviors. Subcutaneous (3 mg/kg, sc) or oral (0.02 mg/ml, oral) melatonin treatments in C57 mice did not modify either the total 24 h magnitude or temporal distribution of homecage behaviors when compared with vehicle treatments. We conclude that C3H and C57 mice show different spontaneous activity and behavioral rhythms specifically during the night period which are not modulated by melatonin. Copyright © 2013 Elsevier B.V. All rights reserved.

Reciprocal Relations Between Objectively Measured Sleep Patterns and Diurnal Cortisol Rhythms in Late Adolescents

PubMed Central

Zeiders, Katharine H.; Doane Sampey, Leah D.; Adam, Emma K.

2011-01-01

Purpose To examine how hours of sleep and wake times relate to between-person differences and day-to-day changes in diurnal cortisol rhythms in late adolescents Methods Older adolescents (N = 119) provided six cortisol samples (wakeup, +30min, + 2 hours, +8 hours, + 12 hours, and bedtime) on each of three consecutive days while wearing an actigraph. We examined how average (across 3 days) and day-to-day changes in hours of sleep and wake times related to diurnal cortisol patterns. Results On average, greater hours of sleep related steeper decline in cortisol across the days. Day-to-day analyses revealed that prior night’s hours of sleep predicted steeper diurnal slopes the next day, while greater waking cortisol levels and steeper slopes predicted greater hours of sleep and a later wake time the next day. Conclusions Our results suggest a bidirectional relationship between sleep and HPA axis activity. PMID:21575815

Diurnal vocal activity of gray whales in Laguna San Ignacio, BCS, Mexico

NASA Astrophysics Data System (ADS)

Guerra, Melania; Thode, Aaron; Wisdom, Sheyna; Gonzalez, Sergio; Urban, Jorge; Sumich, James

2005-09-01

Three sets of portable horizontal acoustic arrays were deployed during a week in February 2005 to gather acoustic recordings of gray whales (Eschrichtius robustus) in Laguna San Ignacio, one of the three major breeding/calving lagoons in Baja California, Mexico. These arrays, which were constructed by attaching a pair of autonomous flash-memory acoustic sensors to a rope, were deployed for 36 consecutive hours on two occasions, spatially covering the narrowest point of the lagoon near Punta Piedra, the area of the highest concentration of whales. Additionally a single hydrophone was deployed off a small boat to record during friendly encounters with single whales and cow/calf pairs. Each recorder's time series was analyzed for Type 1 gray whale sounds (called pops), which are pulsive, broadband, and have substantial acoustic energy between 100 and 600 Hz. The number of automated acoustic detections per hour can be compared with population sizes estimated by two visual surveys conducted by scientists of the Autonomous University of Baja California Sur, La Paz. The results of several automated analyses of both the bottom-mounted and boat-deployed recordings will be presented, with a focus on potential diurnal patterns in the vocal activity.

Sleep duration partially accounts for race differences in diurnal cortisol dynamics.

PubMed

Peterson, Laurel M; Miller, Karissa G; Wong, Patricia M; Anderson, Barbara P; Kamarck, Thomas W; Matthews, Karen A; Kirschbaum, Clemens; Manuck, Stephen B

2017-05-01

Emerging research demonstrates race differences in diurnal cortisol slope, an indicator of hypothalamic-pituitary-adrenocortical (HPA)-axis functioning associated with morbidity and mortality, with African Americans showing flatter diurnal slopes than their White counterparts. Sleep characteristics are associated with both race and with HPA-axis functioning. The present report examines whether sleep duration may account for race differences in cortisol dynamics. Participants were 424 employed African American and White adults (mean age = 42.8 years, 84.2% White, 53.6% female) with no cardiovascular disease (Adult Health and Behavior Project-Phase 2 [AHAB-II] cohort, University of Pittsburgh). Cortisol slope was calculated using 4 salivary cortisol readings, averaged over each of 4 days. Demographic (age, sex), psychosocial (socioeconomic status [SES], affect, discrimination), and health behaviors (smoking, alcohol use, physical activity) variables were used as covariates, and sleep (self-report and accelerometry) was also assessed. African Americans had flatter slopes than Whites (F(1, 411) = 10.45, B = .02, p = .001) in models adjusting for demographic, psychosocial, and health behavior covariates. Shorter actigraphy-assessed total sleep time was a second significant predictor of flatter cortisol slopes (F(1, 411) = 25.27, B = -.0002, p < .0001). Total sleep time partially accounted for the relationship between race and diurnal slope [confidence interval = .05 (lower = .014, upper .04)]. African Americans have flatter diurnal cortisol slopes than their White counterparts, an effect that may be partially attributable to race differences in nightly sleep duration. Sleep parameters should be considered in further research on race and cortisol. (PsycINFO Database Record (c) 2017 APA, all rights reserved).

Active cycle of breathing technique for cystic fibrosis.

PubMed

Mckoy, Naomi A; Wilson, Lisa M; Saldanha, Ian J; Odelola, Olaide A; Robinson, Karen A

2016-07-05

People with cystic fibrosis experience chronic airway infections as a result of mucus build up within the lungs. Repeated infections often cause lung damage and disease. Airway clearance therapies aim to improve mucus clearance, increase sputum production, and improve airway function. The active cycle of breathing technique (also known as ACBT) is an airway clearance method that uses a cycle of techniques to loosen airway secretions including breathing control, thoracic expansion exercises, and the forced expiration technique. This is an update of a previously published review. To compare the clinical effectiveness of the active cycle of breathing technique with other airway clearance therapies in cystic fibrosis. We searched the Cochrane Cystic Fibrosis Trials Register, compiled from electronic database searches and handsearching of journals and conference abstract books. We also searched the reference lists of relevant articles and reviews.Date of last search: 25 April 2016. Randomised or quasi-randomised controlled clinical studies, including cross-over studies, comparing the active cycle of breathing technique with other airway clearance therapies in cystic fibrosis. Two review authors independently screened each article, abstracted data and assessed the risk of bias of each study. Our search identified 62 studies, of which 19 (440 participants) met the inclusion criteria. Five randomised controlled studies (192 participants) were included in the meta-analysis; three were of cross-over design. The 14 remaining studies were cross-over studies with inadequate reports for complete assessment. The study size ranged from seven to 65 participants. The age of the participants ranged from six to 63 years (mean age 22.33 years). In 13 studies, follow up lasted a single day. However, there were two long-term randomised controlled studies with follow up of one to three years. Most of the studies did not report on key quality items, and therefore, have an unclear risk of

Modeling the diurnal variability of agricultural ammonia in Bakersfield, California, during the CalNex campaign

NASA Astrophysics Data System (ADS)

Lonsdale, Chantelle R.; Hegarty, Jennifer D.; Cady-Pereira, Karen E.; Alvarado, Matthew J.; Henze, Daven K.; Turner, Matthew D.; Capps, Shannon L.; Nowak, John B.; Neuman, J. Andy; Middlebrook, Ann M.; Bahreini, Roya; Murphy, Jennifer G.; Markovic, Milos Z.; VandenBoer, Trevor C.; Russell, Lynn M.; Scarino, Amy Jo

2017-02-01

NH3 retrievals from the NASA Tropospheric Emission Spectrometer (TES), as well as surface and aircraft observations of NH3(g) and submicron NH4(p), are used to evaluate modeled concentrations of NH3(g) and NH4(p) from the Community Multiscale Air Quality (CMAQ) model in the San Joaquin Valley (SJV) during the California Research at the Nexus of Air Quality and Climate Change (CalNex) campaign. We find that simulations of NH3 driven with the California Air Resources Board (CARB) emission inventory are qualitatively and spatially consistent with TES satellite observations, with a correlation coefficient (r2) of 0.64. However, the surface observations at Bakersfield indicate a diurnal cycle in the model bias, with CMAQ overestimating surface NH3 at night and underestimating it during the day. The surface, satellite, and aircraft observations all suggest that daytime NH3 emissions in the CARB inventory are underestimated by at least a factor of 2, while the nighttime overestimate of NH3(g) is likely due to a combination of overestimated NH3 emissions and underestimated deposition.Running CMAQ v5.0.2 with the bi-directional NH3 scheme reduces NH3 concentrations at night and increases them during the day. This reduces the model bias when compared to the surface and satellite observations, but the increased concentrations aloft significantly increase the bias relative to the aircraft observations. We attempt to further reduce model bias by using the surface observations at Bakersfield to derive an empirical diurnal cycle of NH3 emissions in the SJV, in which nighttime and midday emissions differ by about a factor of 4.5. Running CMAQv5.0.2 with a bi-directional NH3 scheme together with this emissions diurnal profile further reduces model bias relative to the surface observations. Comparison of these simulations with the vertical profile retrieved by TES shows little bias except for the lowest retrieved level, but the model bias relative to flight data aloft increases

Diurnal Salivary Alpha-amylase Dynamics among Dementia Family Caregivers

PubMed Central

Liu, Yin; Granger, Douglas A.; Kim, Kyungmin; Klein, Laura C.; Almeida, David M.; Zarit, Steven H.

2016-01-01

Objective The study examined diurnal regulation of salivary alpha-amylase (sAA) in association with daily stressors, adult day services (ADS) use, and other caregiving characteristics. Methods A sample of 165 family caregivers of individuals with dementia (IWD) completed an 8-day diary study. Caregivers provided 5 saliva samples across the 8 days. On some days, caregivers provided all or most of the care. On other days, their relative attended ADS for part of the day. A 3-level unconditional linear spline model was fit to describe the typical sAA diurnal rhythms. Predictors were then added to the unconditional model to test the hypotheses on ADS use and daily stressors. Results Daily ADS use did not have an effect on diurnal sAA regulation. However, controlling for daily ADS use, greater ADS use over the 8 days was associated with a more prominent rise between 30 minutes after wake-up and before lunch, and a more prominent decline between before lunch and late afternoon. Fewer ADS days were associated with a more flattened sAA diurnal rhythm. Additionally, greater daily care-related stressor exposures had a within-person association with lower sAA levels in the late afternoon. Care-related stressor exposures had significant within- and between-person associations with sAA diurnal slopes. Furthermore, daily positive experiences had a significant between-person association with sAA diurnal slopes. Conclusions Caring for a disabled family member may heighten the vulnerability to potential physiological conditions. Respite from care stressors from ADS use may have some biobehavioral benefits on sAA regulations. PMID:27786517

40 CFR 1060.525 - How do I test fuel systems for diurnal emissions?

Code of Federal Regulations, 2014 CFR

2014-07-01

... 40 Protection of Environment 33 2014-07-01 2014-07-01 false How do I test fuel systems for diurnal... EQUIPMENT Test Procedures § 1060.525 How do I test fuel systems for diurnal emissions? Use the procedures of... emissions from the measured diurnal emissions if the fuel tank is preconditioned with diurnal test fuel as...

40 CFR 1060.525 - How do I test fuel systems for diurnal emissions?

Code of Federal Regulations, 2012 CFR

2012-07-01

... 40 Protection of Environment 34 2012-07-01 2012-07-01 false How do I test fuel systems for diurnal... EQUIPMENT Test Procedures § 1060.525 How do I test fuel systems for diurnal emissions? Use the procedures of... emissions from the measured diurnal emissions if the fuel tank is preconditioned with diurnal test fuel as...

40 CFR 1060.525 - How do I test fuel systems for diurnal emissions?

Code of Federal Regulations, 2013 CFR

2013-07-01

... 40 Protection of Environment 34 2013-07-01 2013-07-01 false How do I test fuel systems for diurnal... EQUIPMENT Test Procedures § 1060.525 How do I test fuel systems for diurnal emissions? Use the procedures of... emissions from the measured diurnal emissions if the fuel tank is preconditioned with diurnal test fuel as...

Diurnal warming in shallow coastal seas: Observations from the Caribbean and Great Barrier Reef regions

NASA Astrophysics Data System (ADS)

Zhu, X.; Minnett, P. J.; Berkelmans, R.; Hendee, J.; Manfrino, C.

2014-07-01

A good understanding of diurnal warming in the upper ocean is important for the validation of satellite-derived sea surface temperature (SST) against in-situ buoy data and for merging satellite SSTs taken at different times of the same day. For shallow coastal regions, better understanding of diurnal heating could also help improve monitoring and prediction of ecosystem health, such as coral reef bleaching. Compared to its open ocean counterpart which has been studied extensively and modeled with good success, coastal diurnal warming has complicating localized characteristics, including coastline geometry, bathymetry, water types, tidal and wave mixing. Our goal is to characterize coastal diurnal warming using two extensive in-situ temperature and weather datasets from the Caribbean and Great Barrier Reef (GBR), Australia. Results showed clear daily warming patterns in most stations from both datasets. For the three Caribbean stations where solar radiation is the main cause of daily warming, the mean diurnal warming amplitudes were about 0.4 K at depths of 4-7 m and 0.6-0.7 K at shallower depths of 1-2 m; the largest warming value was 2.1 K. For coral top temperatures of the GBR, 20% of days had warming amplitudes >1 K, with the largest >4 K. The bottom warming at shallower sites has higher daily maximum temperatures and lower daily minimum temperatures than deeper sites nearby. The averaged daily warming amplitudes were shown to be closely related to daily average wind speed and maximum insolation, as found in the open ocean. Diurnal heating also depends on local features including water depth, location on different sections of the reef (reef flat vs. reef slope), the relative distance from the barrier reef chain (coast vs. lagoon stations vs. inner barrier reef sites vs. outer rim sites); and the proximity to the tidal inlets. In addition, the influence of tides on daily temperature changes and its relative importance compared to solar radiation was quantified by

Transkingdom control of microbiota diurnal oscillations promotes metabolic homeostasis.

PubMed

Thaiss, Christoph A; Zeevi, David; Levy, Maayan; Zilberman-Schapira, Gili; Suez, Jotham; Tengeler, Anouk C; Abramson, Lior; Katz, Meirav N; Korem, Tal; Zmora, Niv; Kuperman, Yael; Biton, Inbal; Gilad, Shlomit; Harmelin, Alon; Shapiro, Hagit; Halpern, Zamir; Segal, Eran; Elinav, Eran

2014-10-23

All domains of life feature diverse molecular clock machineries that synchronize physiological processes to diurnal environmental fluctuations. However, no mechanisms are known to cross-regulate prokaryotic and eukaryotic circadian rhythms in multikingdom ecosystems. Here, we show that the intestinal microbiota, in both mice and humans, exhibits diurnal oscillations that are influenced by feeding rhythms, leading to time-specific compositional and functional profiles over the course of a day. Ablation of host molecular clock components or induction of jet lag leads to aberrant microbiota diurnal fluctuations and dysbiosis, driven by impaired feeding rhythmicity. Consequently, jet-lag-induced dysbiosis in both mice and humans promotes glucose intolerance and obesity that are transferrable to germ-free mice upon fecal transplantation. Together, these findings provide evidence of coordinated metaorganism diurnal rhythmicity and offer a microbiome-dependent mechanism for common metabolic disturbances in humans with aberrant circadian rhythms, such as those documented in shift workers and frequent flyers.

Dichromatic vision in a fruit bat with diurnal proclivities: the Samoan flying fox (Pteropus samoensis).

PubMed

Melin, Amanda D; Danosi, Christina F; McCracken, Gary F; Dominy, Nathaniel J

2014-12-01

A nocturnal bottleneck during mammalian evolution left a majority of species with two cone opsins, or dichromatic color vision. Primate trichromatic vision arose from the duplication and divergence of an X-linked opsin gene, and is long attributed to tandem shifts from nocturnality to diurnality and from insectivory to frugivory. Opsin gene variation and at least one duplication event exist in the order Chiroptera, suggesting that trichromatic vision could evolve under favorable ecological conditions. The natural history of the Samoan flying fox (Pteropus samoensis) meets these conditions--it is a large bat that consumes nectar and fruit and demonstrates strong diurnal proclivities. It also possesses a visual system that is strikingly similar to that of primates. To explore the potential for opsin gene duplication and divergence in this species, we sequenced the opsin genes of 11 individuals (19 X-chromosomes) from three South Pacific islands. Our results indicate the uniform presence of two opsins with predicted peak sensitivities of ca. 360 and 553 nm. This result fails to support a causal link between diurnal frugivory and trichromatic vision, although it remains plausible that the diurnal activities of P. samoensis have insufficient antiquity to favor opsin gene renovation.

Diurnal rhythms in psychological reward functioning in healthy young men: 'Wanting', liking, and learning.

PubMed

Byrne, Jamie E M; Murray, Greg

2017-01-01

A range of evidence suggests that human reward functioning is partly driven by the endogenous circadian system, generating 24-hour rhythms in behavioural measures of reward activation. Reward functioning is multifaceted but literature to date is largely limited to measures of self-reported positive mood states. The aim of this study was to advance the field by testing for hypothesised diurnal variation in previously unexplored components of psychological reward: 'wanting', liking, and learning using subjective and behavioural measures. Risky decision making (automatic Balloon Analogue Risk Task), affective responsivity to positive images (International Affective Pictures System), uncued self-reported discrete emotions, and learning-contingent reward (Iowa Gambling Task) were measured at 10.00 hours, 14.00 hours, and 19.00 hours in a counterbalanced repeated measures design with 50 healthy male participants (aged 18-30). As hypothesised, risky decision making (unconscious 'wanting') and ratings of arousal towards positive images (conscious wanting) exhibited a diurnal waveform with indices highest at 14.00 hours. No diurnal rhythm was observed for liking (pleasure ratings to positive images, discrete uncued positive emotions) or in a learning-contingent reward task. Findings reaffirm that diurnal variation in human reward functioning is most pronounced in the motivational 'wanting' components of reward.

Chronotype and diurnal cortisol profile in working women: differences between work and leisure days.

PubMed

Dockray, Samantha; Steptoe, Andrew

2011-06-01

The influence of chronotype on the diurnal profile of salivary cortisol was examined in a sample of 187 healthy women: 21 evening chronotype, 24 morning chronotype and 142 intermediate chronotype. Saliva samples were collected at waking, 30 min post-awakening, at 1000 h, 1200 h, 1500 h, 1700 h and at bedtime on one work and one leisure day. Several components of the diurnal profile were examined including the cortisol awakening response, the total cortisol output and the diurnal profile on both the work and the leisure day, a significant main effect of time emerged (both p<0.01). After adjustment for age, smoking status, self-rated health, time of waking, and sleep problems, no effect of chronotype was evident for cortisol in the evening, the cortisol awakening response, or total cortisol output over the working day. However, on the leisure day, total cortisol output was greater in evening-types than intermediate or morning-types, after adjustment for covariates (p=0.029). The present data indicate that chronotype has a limited impact on the diurnal cortisol profile of healthy women, and may be somewhat impervious to individual preferences for morning or evening activity. Copyright © 2010 Elsevier Ltd. All rights reserved.

The seasonal cycle of the mixing layer height and its impact on black carbon concentrations in the Kathmandu Valley (Nepal)

NASA Astrophysics Data System (ADS)

Mues, Andrea; Rupakheti, Maheswar; Hoor, Peter; Bozem, Heiko; Münkel, Christoph; Lauer, Axel; Butler, Tim

2016-04-01

season, the observed diurnal cycle typically shows the lowest amplitude and the lowest mixing height during the day and the highest in the night and morning hours of all seasons. These characteristics can mainly be explained with frequently present clouds and the associated lack of incoming solar radiation and outgoing longwave radiation. In general there is a clear anti-correlation of the BC concentration and the mixing layer height although this relation is less pronounced in the monsoon season. The shape and magnitude of the BC diurnal cycle differs between the seasons (e.g., daily maximum concentration from around 6 to 50 μg/m3 depending on the season). This is partly due to the different meteorological conditions including the mixing layer height but also caused by the different (seasonal and diurnal) time profiles of the main emission sources. From late December to April, for instance, brick kilns are major emitters of black carbon. The brick kilns emit continuously throughout the day whereas in the other months sources with more pronounced diurnal cycles, such as traffic and cooking activities, are dominating the total emissions.

Long-term stability of diurnal salivary cortisol and alpha-amylase secretion patterns.

PubMed

Skoluda, Nadine; La Marca, Roberto; Gollwitzer, Mario; Müller, Andreas; Limm, Heribert; Marten-Mittag, Birgitt; Gündel, Harald; Angerer, Peter; Nater, Urs M

2017-06-01

This study aimed to investigate long-term stability and variability of diurnal cortisol and alpha-amylase patterns. Diurnal cortisol and alpha-amylase secretion patterns were assessed on a single workday with three waves of measurement across a total time period of 24months in 189 participants. Separate hierarchical linear models were analyzed, with and without a number of potential predictor variables (age, BMI, smoking, chronic stress, stress reactivity). While low long-term stability was found in diurnal cortisol, the stability of diurnal alpha-amylase was moderate across the time period of 24months. Several predictor variables had a positive impact on diurnal cortisol and alpha-amylase secretion patterns averaged across waves. Our findings underpin the notion that long-term stability is not necessarily warranted in longitudinal studies. It is important to choose an appropriate study design when attempting to disentangle clinically and biologically relevant changes from naturally occurring variations in diurnal cortisol and alpha-amylase. Copyright © 2017 Elsevier Inc. All rights reserved.

The Effect of "Rogue" Active Regions on the Solar Cycle

NASA Astrophysics Data System (ADS)

Nagy, Melinda; Lemerle, Alexandre; Labonville, François; Petrovay, Kristóf; Charbonneau, Paul

2017-11-01

The origin of cycle-to-cycle variations in solar activity is currently the focus of much interest. It has recently been pointed out that large individual active regions with atypical properties can have a significant impact on the long-term behavior of solar activity. We investigate this possibility in more detail using a recently developed 2×2D dynamo model of the solar magnetic cycle. We find that even a single "rogue" bipolar magnetic region (BMR) in the simulations can have a major effect on the further development of solar activity cycles, boosting or suppressing the amplitude of subsequent cycles. In extreme cases, an individual BMR can completely halt the dynamo, triggering a grand minimum. Rogue BMRs also have the potential to induce significant hemispheric asymmetries in the solar cycle. To study the effect of rogue BMRs in a more systematic manner, a series of dynamo simulations were conducted, in which a large test BMR was manually introduced in the model at various phases of cycles of different amplitudes. BMRs emerging in the rising phase of a cycle can modify the amplitude of the ongoing cycle, while BMRs emerging in later phases will only affect subsequent cycles. In this model, the strongest effect on the subsequent cycle occurs when the rogue BMR emerges around cycle maximum at low latitudes, but the BMR does not need to be strictly cross-equatorial. Active regions emerging as far as 20° from the equator can still have a significant effect. We demonstrate that the combined effect of the magnetic flux, tilt angle, and polarity separation of the BMR on the dynamo is via their contribution to the dipole moment, δ D_{BMR}. Our results indicate that prediction of the amplitude, starting epoch, and duration of a cycle requires an accurate accounting of a broad range of active regions emerging in the previous cycle.

The impact of diurnal sleep on the consolidation of a complex gross motor adaptation task

PubMed Central

Hoedlmoser, Kerstin; Birklbauer, Juergen; Schabus, Manuel; Eibenberger, Patrick; Rigler, Sandra; Mueller, Erich

2015-01-01

Diurnal sleep effects on consolidation of a complex, ecological valid gross motor adaptation task were examined using a bicycle with an inverse steering device. We tested 24 male subjects aged between 20 and 29 years using a between-subjects design. Participants were trained to adapt to the inverse steering bicycle during 45 min. Performance was tested before (TEST1) and after (TEST2) training, as well as after a 2 h retention interval (TEST3). During retention, participants either slept or remained awake. To assess gross motor performance, subjects had to ride the inverse steering bicycle 3 × 30 m straight-line and 3 × 30 m through a slalom. Beyond riding time, we sophisticatedly measured performance accuracy (standard deviation of steering angle) in both conditions using a rotatory potentiometer. A significant decrease of accuracy during straight-line riding after nap and wakefulness was shown. Accuracy during slalom riding remained stable after wakefulness but was reduced after sleep. We found that the duration of rapid eye movement sleep as well as sleep spindle activity are negatively related with gross motor performance changes over sleep. Together these findings suggest that the consolidation of adaptation to a new steering device does not benefit from a 2 h midday nap. We speculate that in case of strongly overlearned motor patterns such as normal cycling, diurnal sleep spindles and rapid eye movement sleep might even help to protect everyday needed skills, and to rapidly forget newly acquired, interfering and irrelevant material. PMID:25256866

Diurnal salivary alpha-amylase dynamics among dementia family caregivers.

PubMed

Liu, Yin; Granger, Douglas A; Kim, Kyungmin; Klein, Laura C; Almeida, David M; Zarit, Steven H

2017-02-01

The study examined diurnal regulation of salivary alpha-amylase (sAA) in association with daily stressors, adult day services (ADS) use, and other caregiving characteristics. A sample of 165 family caregivers of individuals with dementia (IWD) completed an 8-day diary study. Caregivers provided 5 saliva samples across the 8 days. On some days, caregivers provided all or most of the care. On other days, their relative attended ADS for part of the day. A 3-level unconditional linear spline model was fit to describe the typical sAA diurnal rhythms. Predictors were then added to the unconditional model to test the hypotheses on ADS use and daily stressors. Daily ADS use did not have an effect on diurnal sAA regulation. However, controlling for daily ADS use, greater ADS use over the 8 days was associated with a more prominent rise between 30 min after wake-up and before lunch, and a more prominent decline between before lunch and late afternoon. Fewer ADS days were associated with a more flattened sAA diurnal rhythm. Additionally, greater daily care-related stressor exposures had a within-person association with lower sAA levels in the late afternoon. Care-related stressor exposures had significant within- and between-person associations with sAA diurnal slopes. Furthermore, daily positive experiences had a significant between-person association with sAA diurnal slopes. Caring for a disabled family member may heighten the vulnerability to potential physiological conditions. Respite from care stressors from ADS use may have some biobehavioral benefits on sAA regulations. (PsycINFO Database Record (c) 2017 APA, all rights reserved).

Long-Range Solar Activity Predictions: A Reprieve from Cycle #24's Activity

NASA Technical Reports Server (NTRS)

Richon, K.; Schatten, K.

2003-01-01

We discuss the field of long-range solar activity predictions and provide an outlook into future solar activity. Orbital predictions for satellites in Low Earth Orbit (LEO) depend strongly on exospheric densities. Solar activity forecasting is important in this regard, as the solar ultra-violet (UV) and extreme ultraviolet (EUV) radiations inflate the upper atmospheric layers of the Earth, forming the exosphere in which satellites orbit. Rather than concentrate on statistical, or numerical methods, we utilize a class of techniques (precursor methods) which is founded in physical theory. The geomagnetic precursor method was originally developed by the Russian geophysicist, Ohl, using geomagnetic observations to predict future solar activity. It was later extended to solar observations, and placed within the context of physical theory, namely the workings of the Sun s Babcock dynamo. We later expanded the prediction methods with a SOlar Dynamo Amplitude (SODA) index. The SODA index is a measure of the buried solar magnetic flux, using toroidal and poloidal field components. It allows one to predict future solar activity during any phase of the solar cycle, whereas previously, one was restricted to making predictions only at solar minimum. We are encouraged that solar cycle #23's behavior fell closely along our predicted curve, peaking near 192, comparable to the Schatten, Myers and Sofia (1996) forecast of 182+/-30. Cycle #23 extends from 1996 through approximately 2006 or 2007, with cycle #24 starting thereafter. We discuss the current forecast of solar cycle #24, (2006-2016), with a predicted smoothed F10.7 radio flux of 142+/-28 (1-sigma errors). This, we believe, represents a reprieve, in terms of reduced fuel costs, etc., for new satellites to be launched or old satellites (requiring reboosting) which have been placed in LEO. By monitoring the Sun s most deeply rooted magnetic fields; long-range solar activity can be predicted. Although a degree of uncertainty

Rain reverses diel activity rhythms in an estuarine teleost

PubMed Central

Payne, Nicholas L.; van der Meulen, Dylan E.; Gannon, Ruan; Semmens, Jayson M.; Suthers, Iain M.; Gray, Charles A.; Taylor, Matthew D.

2013-01-01

Activity rhythms are ubiquitous in nature, and generally synchronized with the day–night cycle. Several taxa have been shown to switch between nocturnal and diurnal activity in response to environmental variability, and these relatively uncommon switches provide a basis for greater understanding of the mechanisms and adaptive significance of circadian (approx. 24 h) rhythms. Plasticity of activity rhythms has been identified in association with a variety of factors, from changes in predation pressure to an altered nutritional or social status. Here, we report a switch in activity rhythm that is associated with rainfall. Outside periods of rain, the estuarine-associated teleost Acanthopagrus australis was most active and in shallower depths during the day, but this activity and depth pattern was reversed in the days following rain, with diurnality restored as estuarine conductivity and turbidity levels returned to pre-rain levels. Although representing the first example of a rain-induced reversal of activity rhythm in an aquatic animal of which we are aware, our results are consistent with established models on the trade-offs between predation risk and foraging efficiency. PMID:23173211

Rest-Activity Cycles in Childhood and Adolescent Depression.

ERIC Educational Resources Information Center

Armitage, Roseanne; Hoffmann, Robert; Emslie, Graham; Rintelman, Jeanne; Moore, Jarrette; Lewis, Kelly

2004-01-01

Objective: To quantify circadian rhythms in rest-activity cycles in depressed children and adolescents. Method: Restactivity cycles were evaluated by actigraphy over five consecutive 24-hour periods in 100 children and adolescents, including 59 outpatients with major depressive disorder (MDD) and 41 healthy normal controls. Total activity, total…

Diurnal Differences in OLR Climatologies and Anomaly Time Series

NASA Technical Reports Server (NTRS)

Susskind, Joel; Lee, Jae N.; Iredell, Lena; Loeb, Norm

2015-01-01

AIRS (Atmospheric Infrared Sounder) Version-6 OLR (Outgoing Long-Wave Radiation) matches CERES (Clouds and the Earth's Radiant Energy System) Edition-2.8 OLR very closely on a 1x1 latitude x longitude scale, both with regard to absolute values, and also with regard to anomalies of OLR. There is a bias of 3.5 watts per meter squared, which is nearly constant both in time and space. Contiguous areas contain large positive or negative OLR difference between AIRS and CERES are where the day-night difference of OLR is large. For AIRS, the larger the diurnal cycle, the more likely that sampling twice a day is inadequate. Lower values of OLRclr (Clear Sky OLR) and LWCRF (Longwave Cloud Radiative Forcing) in AIRS compared to CERES is at least in part a result of AIRS sampling over cold and cloudy cases.

QBO Generated Inter-annual Variations of the Diurnal Tide in the Mesosphere

NASA Technical Reports Server (NTRS)

Mayr, Hans G.; Mengel, John G.

2004-01-01

We report results from a study with the Numerical Spectral Model (NSM), which produces in the d i d tide significant inter-annual variations. Applying Hines' Doppler Spread Parameterization (DPS), small-scale gravity waves (GW) drive the Quasi-biennial Oscillation (QBO) and Semi-annual Oscillation (SAO). With a GW source that peaks at the equator and is taken to be isotropic and independent of season, the NSM generates a QBO with variable periods around 27 months and zonal wind amplitudes close to 20 m/s at 30 lan, As reported earlier, the NSM reproduces the observed equinoctial maxima in the diurnal tide at altitudes around 95 km. In the present paper it is shown that the QBO modulates the tide such that the seasonal amplitude maxima can vary from one year to another by as much as 30%. Since the period of the QBO is variable, its phase relative to the seasonal cycle changes. The magnitude of the QBO modulation of the tide thus varies considerably as our long-term model simulation shows. To shed light on the underlying mechanisms, we discuss (a) the relative importance of the linearized advection terms that involve the meridional and vertical winds of the diurnal tide and (b) the effects momentum deposition from GWs filtered by the QBO.

Resonant Third-Degree Diurnal Tides in the Seas Off Western Europe

NASA Technical Reports Server (NTRS)

Ray, Richard D.; Smith, David E. (Technical Monitor)

2000-01-01

Third-degree diurnal tides are estimated from long time series of sea level measurements at three North Atlantic tide gauges. Although their amplitudes are only a few mm or less, their admittances are far larger than those of second-degree diurnal tides, just as Cartwright discovered for the M(sub 1) constituent. The tides are evidently resonantly enhanced owing to high spatial correlation between the third-degree spherical harmonic of the tidal potential and a near-diurnal oceanic normal mode that is most pronounced in the North Atlantic. By estimating the ocean tidal response across the diurnal band (5 tidal constituents plus nodal modulations), the period and Q of this mode and one nearby mode are estimated.

Diurnal variations of ELF transients and background noise in the Schumann resonance band

NASA Astrophysics Data System (ADS)

Greenberg, Eran; Price, Colin

2007-02-01

Schumann resonances (SR) are resonant electromagnetic waves in the Earth-ionosphere cavity, induced primarily by lightning discharges, with a fundamental frequency of about 8 Hz and higher-order modes separated by approximately 6 Hz. The SR are made up of the background signal resulting from global lightning activity and extremely low frequency (ELF) transients resulting from particularly intense lightning discharges somewhere on the planet. Since transients within the Earth-ionosphere cavity due to lightning propagate globally in the ELF range, we can monitor and study global ELF transients from a single station. Data from our Negev Desert (Israel) ELF site are collected using two horizontal magnetic induction coils and a vertical electric field ball antenna, monitored in the 5-40 Hz range with a sampling frequency of 250 Hz. In this paper we present statistics related to the probability distribution of ELF transients and background noise in the time domain and its temporal variations during the day. Our results show that the ELF signal in the time domain follows the normal distribution very well. The σ parameter exhibits three peaks at 0800, 1400, and 2000 UT, which are related to the three main global lightning activity centers in Asia, Africa, and America, respectively. Furthermore, the occurrence of intense ELF events obeys the Poisson distribution, with such intense events occurring every ~10 s, depending on the time of the day. We found that the diurnal changes of the σ parameter are several percent of the mean, while for the number of intense events per minute, the diurnal changes are tens of percent about the mean. We also present the diurnal changes of the SR intensities in the frequency domain as observed at our station. To better understand the diurnal variability of the observations, we simulated the measured ELF background noise using space observations as input, as detected by the Optical Transient Detector (OTD). The most active center which is

Diurnal Changes in the Chilling Sensitivity of Seedlings

PubMed Central

King, Ann I.; Reid, Michael S.; Patterson, Brian D.

1982-01-01

Seedlings of tomato (Lycopersicon esculentum, Mill.) varied diurnally in their sensitivity to chilling temperatures. If chilled near the end of the dark period when they were most sensitive, the time taken to kill half of the seedlings was approximately 3 days, whereas in samples taken 4 hours after the onset of dark, a period of 6 days of chilling was required. Sensitivity dropped rapidly after the onset of the light period. This rhythm was exogenously controlled by the diurnal changes in light, rather than in the temperature. The susceptibility of predawn seedlings could be reduced by exposure to light, by water stress, or by abscisic acid applied to the leaves. However, the subsequent changes in sensitivity to chilling did not correlate with stomatal aperture. Six other chilling-sensitive species showed similar diurnal changes in their chilling sensitivity. Images Fig. 2 PMID:16662448

Thermoregulatory Behavior in Diurnal Lizards as a Vehicle for Teaching Scientific Process

ERIC Educational Resources Information Center

Platz, James E.

2009-01-01

Field experiments offer the opportunity for hands on experience with the scientific process. While this is true of a wide variety of activities, many have pitfalls both experimental and logistical that reduce the overall rate of success, in turn, influencing student learning outcomes. Relying on small, territorial, diurnal lizards and an array of…

A framework for global diurnally-resolved observations of Land Surface Temperature

NASA Astrophysics Data System (ADS)

Ghent, Darren; Remedios, John

2014-05-01

Land surface temperature (LST) is the radiative skin temperature of the land, and is one of the key parameters in the physics of land-surface processes on regional and global scales. Being a key boundary condition in land surface models, which determine the surface to atmosphere fluxes of heat, water and carbon; thus influencing cloud cover, precipitation and atmospheric chemistry predictions within Global models, the requirement for global diurnal observations of LST is well founded. Earth Observation satellites offer an opportunity to obtain global coverage of LST, with the appropriate exploitation of data from multiple instruments providing a capacity to resolve the diurnal cycle on a global scale. Here we present a framework for the production of global, diurnally resolved, data sets for LST which is a key request from users of LST data. We will show how the sampling of both geostationary and low earth orbit data sets could conceptually be employed to build combined, multi-sensor, pole-to-pole data sets. Although global averages already exist for individual instruments and merging of geostationary based LST is already being addressed operationally (Freitas, et al., 2013), there are still a number of important challenges to overcome. In this presentation, we will consider three of the issues still open in LST remote sensing: 1) the consistency amongst retrievals; 2) the clear-sky bias and its quantification; and 3) merging methods and the propagation of uncertainties. For example, the combined use of both geostationary earth orbit (GEO) and low earth orbit (LEO) data, and both infra-red and microwave data are relatively unexplored but are necessary to make the most progress. Hence this study will suggest what is state-of-the-art and how considerable advances can be made, accounting also for recent improvements in techniques and data quality. The GlobTemperature initiative under the Data User Element of ESA's 4th Earth Observation Envelope Programme (2013

Viscosity changes of riparian water controls diurnal fluctuations of stream-flow and DOC concentration

NASA Astrophysics Data System (ADS)

Schwab, Michael; Klaus, Julian; Pfister, Laurent; Weiler, Markus

2015-04-01

Diurnal fluctuations in stream-flow are commonly explained as being triggered by the daily evapotranspiration cycle in the riparian zone, leading to stream flow minima in the afternoon. While this trigger effect must necessarily be constrained by the extent of the growing season of vegetation, we here show evidence of daily stream flow maxima in the afternoon in a small headwater stream during the dormant season. We hypothesize that the afternoon maxima in stream flow are induced by viscosity changes of riparian water that is caused by diurnal temperature variations of the near surface groundwater in the riparian zone. The patterns were observed in the Weierbach headwater catchment in Luxembourg. The catchment is covering an area of 0.45 km2, is entirely covered by forest and is dominated by a schistous substratum. DOC concentration at the outlet of the catchment was measured with the field deployable UV-Vis spectrometer spectro::lyser (scan Messtechnik GmbH) with a high frequency of 15 minutes over several months. Discharge was measured with an ISCO 4120 Flow Logger. During the growing season, stream flow shows a frequently observed diurnal pattern with discharge minima in the afternoon. During the dormant season, a long dry period with daily air temperature amplitudes of around 10 ° C occurred in March and April 2014, with discharge maxima in the afternoon. The daily air temperature amplitude led to diurnal variations in the water temperature of the upper 10 cm of the riparian zone. Higher riparian water temperatures cause a decrease in water viscosity and according to the Hagen-Poiseuille equation, the volumetric flow rate is inversely proportional to viscosity. Based on the Hagen-Poiseuille equation and the viscosity changes of water, we calculated higher flow rates of near surface groundwater through the riparian zone into the stream in the afternoon which explains the stream flow maxima in the afternoon. With the start of the growing season, the viscosity

Diurnal and Semidiurnal Variations in Earth Rotation

NASA Astrophysics Data System (ADS)

Weijing, Q.; Xu, X.; Dong, D.; Zhou, Y.

2016-12-01

In recent decades, earth orientation has been monitored with increasing accuracy by advanced space-geodetic techniques, including Satellite Laser ranging (SLR), Very Long Baseline Interferometry (VLBI) and the Global Positioning System (GPS). We are able to obtain the Earth Rotation Parameters (ERP, polar motion and rotation rate changes) by even 1 to 2 hours observation data, form which obvious diurnal and semidiurnal signals can be detected, and compare them with the predicted results by the ocean model. Both the amplitude and phase are in good agreement in the main diurnal and semidiurnal wave frequency, especially for the UT1 with Consistency of 90% , and 60% for polar motion, there are 30% motivating factor of the diurnal and semidiurnal polar motion have not been identified. This work add the motivating term libration to the empirical tidal models, which can reduce the difference between the high frequency earth rotation model and observations. Then the numerical simulated ocean tidal model is obtained with the newest ERP datas from GPS, and the Scaled Sensitivity Matrix (SSM) approach is used to separate the sidebands in major ocean tides.

Impact of diurnal variability and meteorological factors on the PM2.5 - AOD relationship: Implications for PM2.5 remote sensing.

PubMed

Guo, Jianping; Xia, Feng; Zhang, Yong; Liu, Huan; Li, Jing; Lou, Mengyun; He, Jing; Yan, Yan; Wang, Fu; Min, Min; Zhai, Panmao

2017-02-01

PM 2.5 retrieval from space is still challenging due to the elusive relationship between PM 2.5 and aerosol optical depth (AOD), which is further complicated by meteorological factors. In this work, we investigated the diurnal cycle of PM 2.5 in China, using ground-based PM measurements obtained at 226 sites of China Atmosphere Watch Network during the period of January 2013 to December 2015. Results showed that nearly half of the sites witnessed a PM 2.5 maximum in the morning, in contrast to the least frequent occurrence (5%) in the afternoon when strong solar radiation received at the surface results in rapid vertical diffusion of aerosols and thus lower mass concentration. PM 2.5 tends to peak equally in the morning and evening in North China Plain (NCP) with an amplitude of nearly twice or three times that in the Pearl River Delta (PRD), whereas the morning PM 2.5 peak dominates in Yangtze River Delta (YRD) with a magnitude lying between those of NCP and PRD. The gridded correlation maps reveal varying correlations around each PM 2.5 site, depending on the locations and seasons. Concerning the impact of aerosol diurnal variation on the correlation, the averaging schemes of PM 2.5 using 3-h, 5-h, and 24-h time windows tend to have larger R biases, compared with the scheme of 1-h time window, indicating diurnal variation of aerosols plays a significant role in the establishment of explicit correlation between PM 2.5 and AOD. In addition, high cloud fraction and relative humidity tend to weaken the correlation, regardless of geographical location. Therefore, the impact of meteorology could be one of the most plausible alternatives in explaining the varying R values observed, due to its non-negligible effect on MODIS AOD retrievals. Our findings have implications for PM 2.5 remote sensing, as long as the aerosol diurnal cycle, along with meteorology, are explicitly considered in the future. Copyright © 2016 The Authors. Published by Elsevier Ltd.. All rights

Progress in Research on Diurnal and Semidiurnal Earth Rotation Change

NASA Astrophysics Data System (ADS)

Xu, Xueqing

2015-08-01

We mainly focus on the progress of research on high frequency changes in the earth rotation. Firstly, we review the development course and main motivating factors of the diurnal and semidiurnal earth rotation change. In recent decades, earth orientation has been monitored with increasing accuracy by advanced space-geodetic techniques, including lunar and satellite laser ranging, very long baseline interferometry and the global positioning system. We are able to obtain the Earth Rotation Parameters (ERP, polar motion and rotation rate changes) by even 1 to 2 hours observation data, form which obvious diurnal and semidiurnal signals can be detected, and compare them with the predicted results by the ocean model. Both the amplitude and phase are in good agreement in the main diurnal and semidiurnal wave frequency, especially for the UT1, whose compliance is 90%, and 60% for polar motion, there are 30% motivating factor of the diurnal and semidiurnal polar motion have not been identified. Then we comprehensively review the different types of global ocean tidal correction models since the last eighties century, as well as the application research on diurnal and semidiurnal polar motion and UT1, the current ocean tidal correction models have 10% to 20% uncertainty, and need for further refinement.

Diurnal patterns of gas-exchange and metabolic pools in tundra plants during three phases of the arctic growing season.

PubMed

Patankar, Rajit; Mortazavi, Behzad; Oberbauer, Steven F; Starr, Gregory

2013-02-01

Arctic tundra plant communities are subject to a short growing season that is the primary period in which carbon is sequestered for growth and survival. This period is often characterized by 24-h photoperiods for several months a year. To compensate for the short growing season tundra plants may extend their carbon uptake capacity on a diurnal basis, but whether this is true remains unknown. Here, we examined in situ diurnal patterns of physiological activity and foliar metabolites during the early, mid, and late growing season in seven arctic species under light-saturated conditions. We found clear diurnal patterns in photosynthesis and respiration, with midday peaks and midnight lulls indicative of circadian regulation. Diurnal patterns in foliar metabolite concentrations were less distinct between the species and across seasons, suggesting that metabolic pools are likely governed by proximate external factors. This understanding of diurnal physiology will also enhance the parameterization of process-based models, which will aid in better predicting future carbon dynamics for the tundra. This becomes even more critical considering the rapid changes that are occurring circumpolarly that are altering plant community structure, function, and ultimately regional and global carbon budgets.

Diurnal Patterns of Heterotrophic and Autotrophic Soil Respiration in Maize and Switchgrass Bioenergy Cropping Systems

NASA Astrophysics Data System (ADS)

von Haden, A.; Marin-Spiotta, E.; Jackson, R. D.; Kucharik, C. J.

2016-12-01

A high proportion of carbon lost from terrestrial ecosystems occurs via soil CO2 respiration. Soil respiration is comprised of two contrasting sources: heterotrophic respiration (RH) from the decomposition of organic matter and autotrophic respiration (RA) from plant root metabolism. Since the two sources of soil respiration vary widely in their origin, the controls of each source are also likely to differ. However, the challenge of partitioning soil respiration sources in situ has limited our mechanistic understanding of RH and RA. Our objective was to evaluate the in situ diurnal controls of RH and RA in maize (Zea mays L.) and switchgrass (Panicum virgatum L.) bioenergy cropping systems. We hypothesized that both RH and RA would follow diurnal soil temperature trends, but that RA would also respond to diel patterns of photosynthetically active radiation (PAR). We also expected that diurnal soil respiration patterns would vary significantly within the growing season. We evaluated our hypothesis with six diurnal soil respiration campaigns during the 2015 and 2016 growing seasons at Arlington, WI, USA. RH showed clear oscillating diel trends, typically peaking in the mid-afternoon when near-surface soil temperatures were highest. Diurnal RA patterns were more nuanced than RH, but were generally highest in the late afternoon and showed the most pronounced diel trends during peak growing season in July. RA also tended to spike in concert with PAR, but this effect was much more prominent in maize than switchgrass. Continuing efforts will attempt to quantitatively separate the effects of soil temperature and PAR on RA.

Diurnal and nocturnal cardiovascular variability and heart rate arousal response in idiopathic hypersomnia.

PubMed

Sforza, Emilia; Roche, Frédéric; Barthélémy, Jean Claude; Pichot, Vincent

2016-08-01

Autonomic nervous system dysfunction has been described in narcolepsy with cataplexy affecting sympathetic functions. In this study we analyzed whether altered diurnal and nocturnal cardiovascular control is present in idiopathic hypersomnia (IH). Fourteen drug-free patients aged 26.2 ± 7 years and 14 age-matched controls were examined. Clinical data, 24-h polysomnography, heart rate (HR) variability, and the HR response to spontaneous arousal were available. Sleep macrostructure was comparable between controls and patients, with the latter having significantly longer sleep time, a higher number of sleep cycles (p < 0.0001), and low sleep efficiency (p < 0.01). The HR variability indices did not differ between groups, except for the rise of high frequency (HF) and HFnu in patients (p < 0.05) associated with blunted sympathetic indices (p < 0.01). These parasympathetic alterations were present for light, slow wave, and rapid eye-movement sleep and persisted for all sleep cycles. Compared to controls, the HR arousal response was significantly higher (p < 0.01) in patients starting before the arousal onset and persisting into the post-arousal period. In IH patients a dysfunction of the parasympathetic activity during awake and sleep and an altered autonomic response to arousals are present. These findings suggest an impaired parasympathetic function that may explain some vegetative symptoms present in this type of central hypersomnia. Copyright © 2016 Elsevier B.V. All rights reserved.

The CIRCORT database: Reference ranges and seasonal changes in diurnal salivary cortisol derived from a meta-dataset comprised of 15 field studies.

PubMed

Miller, Robert; Stalder, Tobias; Jarczok, Marc; Almeida, David M; Badrick, Ellena; Bartels, Meike; Boomsma, Dorret I; Coe, Christopher L; Dekker, Marieke C J; Donzella, Bonny; Fischer, Joachim E; Gunnar, Megan R; Kumari, Meena; Lederbogen, Florian; Power, Christine; Ryff, Carol D; Subramanian, S V; Tiemeier, Henning; Watamura, Sarah E; Kirschbaum, Clemens

2016-11-01

Diurnal salivary cortisol profiles are valuable indicators of adrenocortical functioning in epidemiological research and clinical practice. However, normative reference values derived from a large number of participants and across a wide age range are still missing. To fill this gap, data were compiled from 15 independently conducted field studies with a total of 104,623 salivary cortisol samples obtained from 18,698 unselected individuals (mean age: 48.3 years, age range: 0.5-98.5 years, 39% females). Besides providing a descriptive analysis of the complete dataset, we also performed mixed-effects growth curve modeling of diurnal salivary cortisol (i.e., 1-16h after awakening). Cortisol decreased significantly across the day and was influenced by both, age and sex. Intriguingly, we also found a pronounced impact of sampling season with elevated diurnal cortisol in spring and decreased levels in autumn. However, the majority of variance was accounted for by between-participant and between-study variance components. Based on these analyses, reference ranges (LC/MS-MS calibrated) for cortisol concentrations in saliva were derived for different times across the day, with more specific reference ranges generated for males and females in different age categories. This integrative summary provides important reference values on salivary cortisol to aid basic scientists and clinicians in interpreting deviations from the normal diurnal cycle. Copyright © 2016 Elsevier Ltd. All rights reserved.

The CIRCORT database: Reference ranges and seasonal changes in diurnal salivary cortisol derived from a meta-dataset comprised of 15 field studies

PubMed Central

Miller, Robert; Stalder, Tobias; Jarczok, Marc; Almeida, David M.; Badrick, Ellena; Bartels, Meike; Boomsma, Dorret I.; Coe, Christopher L.; Dekker, Marieke C. J.; Donzella, Bonny; Fischer, Joachim E.; Gunnar, Megan R.; Kumari, Meena; Lederbogen, Florian; Oldehinkel, Albertine J.; Power, Christine; Rosmalen, Judith G.; Ryff, Carol D.; Subramanian, S V; Tiemeier, Henning; Watamura, Sarah E.; Kirschbaum, Clemens

2016-01-01

Diurnal salivary cortisol profiles are valuable indicators of adrenocortical functioning in epidemiological research and clinical practice. However, normative reference values derived from a large number of participants and across a wide age range are still missing. To fill this gap, data were compiled from 15 independently conducted field studies with a total of 104,623 salivary cortisol samples obtained from 18,698 unselected individuals (mean age: 48.3 years, age range: 0.5 to 98.5 years, 39% females). Besides providing a descriptive analysis of the complete dataset, we also performed mixed-effects growth curve modeling of diurnal salivary cortisol (i.e., 1 to 16 hours after awakening). Cortisol decreased significantly across the day and was influenced by both, age and sex. Intriguingly, we also found a pronounced impact of sampling season with elevated diurnal cortisol in spring and decreased levels in autumn. However, the majority of variance was accounted for by between-participant and between-study variance components. Based on these analyses, reference ranges (LC/MS-MS calibrated) for cortisol concentrations in saliva were derived for different times across the day, with more specific reference ranges generated for males and females in different age categories. This integrative summary provides important reference values on salivary cortisol to aid basic scientists and clinicians in interpreting deviations from the normal diurnal cycle. PMID:27448524

Rhythmic Diurnal Synthesis and Signaling of Retinoic Acid in the Rat Pineal Gland and Its Action to Rapidly Downregulate ERK Phosphorylation.

PubMed

Ashton, Anna; Stoney, Patrick N; Ransom, Jemma; McCaffery, Peter

2018-03-08

Vitamin A is important for the circadian timing system; deficiency disrupts daily rhythms in activity and clock gene expression, and reduces the nocturnal peak in melatonin in the pineal gland. However, it is currently unknown how these effects are mediated. Vitamin A primarily acts via the active metabolite, retinoic acid (RA), a transcriptional regulator with emerging non-genomic activities. We investigated whether RA is subject to diurnal variation in synthesis and signaling in the rat pineal gland. Its involvement in two key molecular rhythms in this gland was also examined: kinase activation and induction of Aanat, which encodes the rhythm-generating melatonin synthetic enzyme. We found diurnal changes in expression of several genes required for RA signaling, including a RA receptor and synthetic enzymes. The RA-responsive gene Cyp26a1 was found to change between day and night, suggesting diurnal changes in RA activity. This corresponded to changes in RA synthesis, suggesting rhythmic production of RA. Long-term RA treatment in vitro upregulated Aanat transcription, while short-term treatment had no effect. RA was also found to rapidly downregulate extracellular signal-regulated kinase (ERK) 1/2 phosphorylation, suggesting a rapid non-genomic action which may be involved in driving the molecular rhythm in ERK1/2 activation in this gland. These results demonstrate that there are diurnal changes in RA synthesis and activity in the rat pineal gland which are partially under circadian control. These may be key to the effects of vitamin A on circadian rhythms, therefore providing insight into the molecular link between this nutrient and the circadian system.

Diurnal Profiles of Melatonin Synthesis-Related Indoles, Catecholamines and Their Metabolites in the Duck Pineal Organ

PubMed Central

Lewczuk, Bogdan; Ziółkowska, Natalia; Prusik, Magdalena; Przybylska-Gornowicz, Barbara

2014-01-01

This study characterizes the diurnal profiles of ten melatonin synthesis-related indoles, the quantitative relations between these compounds, and daily variations in the contents of catecholamines and their metabolites in the domestic duck pineal organ. Fourteen-week-old birds, which were reared under a 12L:12D cycle, were killed at two-hour intervals. The indole contents were measured using HPLC with fluorescence detection, whereas the levels of catecholamines and their metabolites were measured using HPLC with electrochemical detection. All indole contents, except for tryptophan, showed significant diurnal variations. The 5-hydroxytryptophan level was approximately two-fold higher during the scotophase than during the photophase. The serotonin content increased during the first half of the photophase, remained elevated for approximately 10 h and then rapidly decreased in the middle of the scotophase. N-acetylserotonin showed the most prominent changes, with a more than 15-fold increase at night. The melatonin cycle demonstrated only an approximately 5-fold difference between the peak and nadir. The 5-methoxytryptamine content was markedly elevated during the scotophase. The 5-hydroxyindole acetic acid, 5-hydroxytryptophol, 5-methoxyindole acetic acid and 5-methoxytryptophol profiles were analogous to the serotonin rhythm. The norepinephrine and dopamine contents showed no significant changes. The DOPA, DOPAC and homovanillic acid levels were higher during the scotophase than during the photophase. Vanillylmandelic acid showed the opposite rhythm, with an elevated level during the daytime. PMID:25032843

The effect of sulfate concentration on (sub)millimeter-scale sulfide δ 34S in hypersaline cyanobacterial mats over the diurnal cycle

NASA Astrophysics Data System (ADS)

Fike, David A.; Finke, Niko; Zha, Jessica; Blake, Garrett; Hoehler, Tori M.; Orphan, Victoria J.

2009-10-01

Substantial isotopic fractionations are associated with many microbial sulfur metabolisms and measurements of the bulk δ 34S isotopic composition of sulfur species (predominantly sulfates and/or sulfides) have been a key component in developing our understanding of both modern and ancient biogeochemical cycling. However, the interpretations of bulk δ 34S measurements are often non-unique, making reconstructions of paleoenvironmental conditions or microbial ecology challenging. In particular, the link between the μm-scale microbial activity that generates isotopic signatures and their eventual preservation as a bulk rock value in the geologic record has remained elusive, in large part because of the difficulty of extracting sufficient material at small scales. Here we investigate the potential for small-scale (˜100 μm-1 cm) δ 34S variability to provide additional constraints for environmental and/or ecological reconstructions. We have investigated the impact of sulfate concentrations (0.2, 1, and 80 mM SO 4) on the δ 34S composition of hydrogen sulfide produced over the diurnal (day/night) cycle in cyanobacterial mats from Guerrero Negro, Baja California Sur, Mexico. Sulfide was captured as silver sulfide on the surface of a 2.5 cm metallic silver disk partially submerged beneath the mat surface. Subsequent analyses were conducted on a Cameca 7f-GEO secondary ion mass spectrometer (SIMS) to record spatial δ 34S variability within the mats under different environmental conditions. Isotope measurements were made in a 2-dimensional grid for each incubation, documenting both lateral and vertical isotopic variation within the mats. Typical grids consisted of ˜400-800 individual measurements covering a lateral distance of ˜1 mm and a vertical depth of ˜5-15 mm. There is a large isotopic enrichment (˜10-20‰) in the uppermost mm of sulfide in those mats where [SO 4] was non-limiting (field and lab incubations at 80 mM). This is attributed to rapid recycling of

Sustained Diurnal Stimulation of Cyclic Electron Flow in Two Tropical Tree Species Erythrophleum guineense and Khaya ivorensis

PubMed Central

Huang, Wei; Yang, Ying-Jie; Hu, Hong; Cao, Kun-Fang; Zhang, Shi-Bao

2016-01-01

The photosystem II (PSII) activity of C3 plants is usually inhibited at noon associated with high light but can be repaired fast in the afternoon. However, the diurnal variation of photosystem I (PSI) activity is unknown. Although, cyclic electron flow (CEF) has been documented as an important mechanism for photosynthesis, the diurnal variation of CEF in sun leaves is little known. We determined the diurnal changes in PSI and PSII activities, light energy dissipation in PSII and the P700 redox state in two tropical tree species Erythrophleum guineense and Khaya ivorensis grown in an open field. The PSI activity (as indicated by the maximum quantity of photo-oxidizable P700) was maintained stable during the daytime. CEF was strongly activated under high light at noon, accompanying with high levels of non-photochemical quenching (NPQ) and PSI oxidation ratio. In the afternoon, CEF was maintained at a relatively high level under low light, which was accompanied with low levels of NPQ and P700 oxidation ratio. These results indicated that CEF was flexibly modulated during daytime under fluctuating light conditions. Under high light at noon, CEF-dependent generation of proton gradient across the thylakoid membranes (ΔpH) mainly contributed to photoprotection for PSI and PSII. By comparison, at low light in the afternoon, the CEF-dependent formation of ΔpH may be important for PSII repair via an additional ATP synthesis. PMID:27486473

The 2009-2010 MU radar head echo observation programme for sporadic and shower meteors: radiant densities and diurnal rates

NASA Astrophysics Data System (ADS)

Kero, J.; Szasz, C.; Nakamura, T.; Meisel, D. D.; Ueda, M.; Fujiwara, Y.; Terasawa, T.; Nishimura, K.; Watanabe, J.

2012-09-01

The aim of this paper is to give an overview of the monthly meteor head echo observations (528.8 h) conducted between 2009 June and 2010 December using the Shigaraki Middle and Upper atmosphere radar in Japan (34°.85 N, 136°.10 E). We present diurnal detection rates and radiant density plots from 18 separate observational campaigns, each lasting for at least one diurnal cycle. Our data comprise more than 106 000 meteors. All six recognized apparent sporadic meteor sources are discernable and their average orbital distributions are presented in terms of geocentric velocity, semimajor axis, inclination and eccentricity. The north and south apex have radiant densities an order of magnitude higher than other apparent source regions. The diurnal detection rates show clear seasonal dependence. The main cause of the seasonal variation is the tilt of the Earth's axis, causing the elevation of the Earth's apex above the local horizon to change as the Earth revolves around the Sun. Yet, the meteor rate variation is not symmetric with respect to the equinoxes. When comparing the radiant density at different times of the year, and thus at different solar longitudes along the Earth's orbit, we have found that the north and south apex source regions fluctuate in strength.

Diurnal flight behavior of Ichneumonoidea (Insecta: Hymenoptera) related to environmental factors in a tropical dry forest.

PubMed

González-Moreno, A; Bordera, S; Leirana-Alcocer, J; Delfín-González, H

2012-06-01

The biology and behavior of insects are strongly influenced by environmental conditions such as temperature and precipitation. Because some of these factors present a within day variation, they may be causing variations on insect diurnal flight activity, but scant information exists on the issue. The aim of this work was to describe the patterns on diurnal variation of the abundance of Ichneumonoidea and their relation with relative humidity, temperature, light intensity, and wind speed. The study site was a tropical dry forest at Ría Lagartos Biosphere Reserve, Mexico; where correlations between environmental factors (relative humidity, temperature, light, and wind speed) and abundance of Ichneumonidae and Braconidae (Hymenoptera: Ichneumonoidea) were estimated. The best regression model for explaining abundance variation was selected using the second order Akaike Information Criterion. The optimum values of temperature, humidity, and light for flight activity of both families were also estimated. Ichneumonid and braconid abundances were significantly correlated to relative humidity, temperature, and light intensity; ichneumonid also showed significant correlations to wind speed. The second order Akaike Information Criterion suggests that in tropical dry conditions, relative humidity is more important that temperature for Ichneumonoidea diurnal activity. Ichneumonid wasps selected toward intermediate values of relative humidity, temperature and the lowest wind speeds; while Braconidae selected for low values of relative humidity. For light intensity, braconids presented a positive selection for moderately high values.

The impact of diurnal sleep on the consolidation of a complex gross motor adaptation task.

PubMed

Hoedlmoser, Kerstin; Birklbauer, Juergen; Schabus, Manuel; Eibenberger, Patrick; Rigler, Sandra; Mueller, Erich

2015-02-01

Diurnal sleep effects on consolidation of a complex, ecological valid gross motor adaptation task were examined using a bicycle with an inverse steering device. We tested 24 male subjects aged between 20 and 29 years using a between-subjects design. Participants were trained to adapt to the inverse steering bicycle during 45 min. Performance was tested before (TEST1) and after (TEST2) training, as well as after a 2 h retention interval (TEST3). During retention, participants either slept or remained awake. To assess gross motor performance, subjects had to ride the inverse steering bicycle 3 × 30 m straight-line and 3 × 30 m through a slalom. Beyond riding time, we sophisticatedly measured performance accuracy (standard deviation of steering angle) in both conditions using a rotatory potentiometer. A significant decrease of accuracy during straight-line riding after nap and wakefulness was shown. Accuracy during slalom riding remained stable after wakefulness but was reduced after sleep. We found that the duration of rapid eye movement sleep as well as sleep spindle activity are negatively related with gross motor performance changes over sleep. Together these findings suggest that the consolidation of adaptation to a new steering device does not benefit from a 2 h midday nap. We speculate that in case of strongly overlearned motor patterns such as normal cycling, diurnal sleep spindles and rapid eye movement sleep might even help to protect everyday needed skills, and to rapidly forget newly acquired, interfering and irrelevant material. © 2014 The Authors. Journal of Sleep Research published by John Wiley & Sons Ltd on behalf of European Sleep Research Society.

Diurnal cross-shore thermal exchange on a tropical forereef

NASA Astrophysics Data System (ADS)

Molina, L.; Pawlak, G.; Wells, J. R.; Monismith, S. G.; Merrifield, M. A.

2014-09-01

Observations of the velocity structure at the Kilo Nalu Observatory on the south shore of Oahu, Hawaii show that thermally driven baroclinic exchange is a dominant mechanism for cross-shore transport for this tropical forereef environment. Estimates of the exchange and net volume fluxes are comparable and show that the average residence time for the zone shoreward of the 12 m isobath is generally much less than 1 day. Although cross-shore wind stress influences the diurnal cross-shore exchange, surface heat flux is identified as the primary forcing mechanism from the phase relationships and from analysis of momentum and buoyancy balances for the record-averaged diurnal structure. Dynamic flow regimes are characterized based on a two-dimensional theoretical framework and the observations of the thermal structure at Kilo Nalu are shown to be in the unsteady temperature regime. Diurnal phasing and the cross-shore momentum balance suggest that turbulent stress divergence is an important driver of the baroclinic exchange. While the thermally driven exchange has a robust diurnal profile in the long term, there is high temporal variability on shorter time scales. Ensemble-averaged diurnal profiles indicate that the exchange is strongly modulated by surface heat flux, wind speed/direction, and alongshore velocity direction. The latter highlights the role of alongshore variability in the thermally driven exchange. Analysis of the thermal balance in the nearshore region indicates that the cross-shore exchange accounts for roughly 38% of the advective heat transport on a daily basis. This article was corrected on 10 OCT 2014. See the end of the full text for details.

POSSIBLE CHROMOSPHERIC ACTIVITY CYCLES IN AD LEO

DOE Office of Scientific and Technical Information (OSTI.GOV)

Buccino, Andrea P.; Petrucci, Romina; Mauas, Pablo J. D.

2014-01-20

AD Leo (GJ 388) is an active dM3 flare star that has been extensively observed both in the quiescent and flaring states. Since this active star is near the fully convective boundary, studying its long-term chromospheric activity in detail could be an appreciable contribution to dynamo theory. Here, using the Lomb-Scargle periodogram, we analyze the Ca II K line-core fluxes derived from CASLEO spectra obtained between 2001 and 2013 and the V magnitude from the ASAS database between 2004 and 2010. From both of these totally independent time series, we obtain a possible activity cycle with a period of approximately seven yearsmore » and a less significant shorter cycle of approximately two years. A tentative interpretation is that a dynamo operating near the surface could be generating the longer cycle, while a second dynamo operating in the deep convection zone could be responsible for the shorter one. Based on the long duration of our observing program at CASLEO and the fact that we observe different spectral features simultaneously, we also analyze the relation between simultaneous measurements of the Na I index (R{sub D}{sup ′}), Hα, and Ca II K fluxes at different activity levels of AD Leo, including flares.« less

Tracking Seasonal and Diurnal Photosynthesis and Plant Water Status in Maize Using SIF, Eddy Covariance Fluxes, PAM Fluorescence and Gas Exchange

NASA Astrophysics Data System (ADS)

Chang, C.; Melkonian, J.; Riha, S. J.; Gu, L.; Sun, Y.

2017-12-01

Improving the sensitivity of methods for crop monitoring and yield forecasting is crucial as the frequency of extreme weather events increases. Conventional remote monitoring methods rely on greenness-based indices such as NDVI and EVI, which do not directly measure photosynthesis and are not sufficiently sensitive to rapid plant stress response. Solar-induced chlorophyll fluorescence (SIF) is a promising new technology that serves as a direct functional proxy of photosynthesis. We developed the first system utilizing dual QE Pro spectrometers to continuously measure the diurnal and seasonal cycle of SIF, and deployed the system in a corn field in upstate New York in 2017. To complement SIF, canopy-level measurements of carbon and water fluxes were also measured, along with concurrent leaf-level measurements of gas exchange and PAM fluorescence, midday water potential, leaf pigments, phenology, LAI, and soil moisture. We show that SIF is well correlated to GPP during the growing season and show that both are controlled by similar environmental conditions including PAR and water availability. We also describe diurnal changes in photosynthesis and plant water status and demonstrate the sensitivity of SIF to diurnal plant response.

The Hydrologic Cycle Distributed Active Archive Center

NASA Technical Reports Server (NTRS)

Hardin, Danny M.; Goodman, H. Michael

1995-01-01

The Marshall Space Flight Center Distributed Active Archive Center in Huntsville, Alabama supports the acquisition, production, archival and dissemination of data relevant to the study of the global hydrologic cycle. This paper describes the Hydrologic Cycle DAAC, surveys its principle data holdings, addresses future growth, and gives information for accessing the data sets.

Primary productivity (PP) in the North Pacific Subtropical Gyre: Understanding drivers of variability via 14C-tracer incubations and PP diagnosed via the diurnal cycle of particulate carbon.

NASA Astrophysics Data System (ADS)

White, A. E.; Letelier, R. M.

2016-02-01

The rate of primary production (PP) in the ocean is a fundamental step in the ocean's food web and biological carbon pump. For more than 50 years oceanographers have relied primarily on estimates of PP based on in vitro measurements of 14CO2 uptake rates. Yet, it is difficult to reconcile PP rates measured in vitro with in situ rates. Here we present diurnal cycles of optically-derived particulate organic carbon (POC) and particle size distributions measured over a series of cruises in the North Pacific relative to traditional 14C-based PP measurements. We have calculated net PP from the daytime increase in optically-derived particulate organic carbon (POC) and the sum of respiration, grazing and sinking from the nighttime POM decrease. Comparison of optically derived NPP to parallel 12-hr 14C incubations are highly significant. The variability in productivity measurements over daily to seasonal to annual time-scales are discussed relative to predominant chemical, physical and climactic forcing.

Dysregulation of the cortisol diurnal rhythm following prenatal alcohol exposure and early life adversity.

PubMed

McLachlan, Kaitlyn; Rasmussen, Carmen; Oberlander, Tim F; Loock, Christine; Pei, Jacqueline; Andrew, Gail; Reynolds, James; Weinberg, Joanne

2016-06-01

The hypothalamic-pituitary-adrenal (HPA) axis is impacted by a multitude of pre- and postnatal factors. Developmental programming of HPA axis function by prenatal alcohol exposure (PAE) has been demonstrated in animal models and in human infants, but remains understudied in older children and adolescents. Moreover, early life adversity (ELA), which occurs at higher rates in children with PAE than in non-exposed children, may also play a role in programming the stress response system. In a cohort of children and adolescents with PAE and ELA (PAE + ELA), we evaluated HPA function through assessment of diurnal cortisol activity compared to that in typically developing controls, as well as the associations among specific ELAs, adverse outcomes, protective factors, and diurnal cortisol. Morning and evening saliva samples were taken under basal conditions from 42 children and adolescents (5-18 years) with PAE + ELA and 43 typically developing controls. High rates of ELA were shown among children with PAE, and significantly higher evening cortisol levels and a flatter diurnal slope were observed in children with PAE + ELA, compared to controls. Medication use in the PAE + ELA group was associated with lower morning cortisol levels, which were comparable to controls. Complex associations were found among diurnal cortisol patterns in the PAE + ELA group and a number of ELAs and later adverse outcomes, whereas protective factors were associated with more typical diurnal rhythms. These results complement findings from research on human infants and animal models showing dysregulated HPA function following PAE, lending weight to the suggestion that PAE and ELA may interact to sensitize the developing HPA axis. The presence of protective factors may buffer altered cortisol regulation, underscoring the importance of early assessment and interventions for children with FASD, and in particular, for the many children with FASD who also have ELA. Copyright © 2016 Elsevier

Dysregulation of the cortisol diurnal rhythm following prenatal alcohol exposure and early life adversity

PubMed Central

McLachlan, Kaitlyn; Rasmussen, Carmen; Oberlander, Tim F.; Loock, Christine; Pei, Jacqueline; Andrew, Gail; Reynolds, James; Weinberg, Joanne

2016-01-01

The hypothalamic-pituitary-adrenal (HPA) axis is impacted by a multitude of pre- and postnatal factors. Developmental programming of HPA axis function by prenatal alcohol exposure (PAE) has been demonstrated in animal models and in human infants, but remains understudied in older children and adolescents. Moreover, early life adversity (ELA), which occurs at higher rates in children with PAE than in non-exposed children, may also play a role in programming the HPA or stress response system. In a cohort of children and adolescents with PAE and ELA (PAE + ELA), we evaluated HPA function through assessment of diurnal cortisol activity compared to that in typically developing controls, as well as the associations among specific ELAs, adverse outcomes, protective factors, and diurnal cortisol. Morning and evening saliva samples were taken under basal conditions from 42 children and adolescents (5–18 years) with PAE + ELA and 43 typically developing controls. High rates of ELA were shown among children with PAE, and significantly higher evening cortisol levels and a flatter diurnal slope were observed in children with PAE + ELA, compared to controls. Medication use in the PAE + ELA group was associated with lower morning cortisol levels, which were comparable to controls. Complex associations were found among diurnal cortisol patterns in the PAE + ELA group and a number of ELAs and later adverse outcomes, whereas protective factors were associated with more typical diurnal rhythms. These results complement findings from research on human infants and animal models showing dysregulated HPA function following PAE, lending weight to the suggestion that PAE and ELA may interact to sensitize the developing HPA axis. The presence of protective factors may buffer altered cortisol regulation, underscoring the importance of early assessment and interventions for children with FASD, and in particular, for the many children with FASD who also have ELA. PMID:27286932

Activity Cycles in Stars

NASA Technical Reports Server (NTRS)

Hathaway, David H.

2009-01-01

Starspots and stellar activity can be detected in other stars using high precision photometric and spectrometric measurements. These observations have provided some surprises (starspots at the poles - sunspots are rarely seen poleward of 40 degrees) but more importantly they reveal behaviors that constrain our models of solar-stellar magnetic dynamos. The observations reveal variations in cycle characteristics that depend upon the stellar structure, convection zone dynamics, and rotation rate. In general, the more rapidly rotating stars are more active. However, for stars like the Sun, some are found to be inactive while nearly identical stars are found to be very active indicating that periods like the Sun's Maunder Minimum (an inactive period from 1645 to 1715) are characteristic of Sun-like stars.

Arabidopsis florigen FT binds to diurnally oscillating phospholipids that accelerate flowering.

PubMed

Nakamura, Yuki; Andrés, Fernando; Kanehara, Kazue; Liu, Yu-chi; Dörmann, Peter; Coupland, George

2014-04-04

Arabidopsis FT protein is a component of florigen, which transmits photoperiodic flowering signals from leaf companion cells to the shoot apex. Here, we show that FT specifically binds phosphatidylcholine (PC) in vitro. A transgenic approach to increase PC levels in vivo in the shoot meristem accelerates flowering whereas reduced PC levels delay flowering, demonstrating that PC levels are correlated with flowering time. The early flowering is related to FT activity, because expression of FT-effector genes is increased in these plants. Simultaneous increase of FT and PC in the shoot apical meristem further stimulates flowering, whereas a loss of FT function leads to an attenuation of the effect of increased PC. Specific molecular species of PC oscillate diurnally, and night-dominant species are not the preferred ligands of FT. Elevating night-dominant species during the day delays flowering. We suggest that FT binds to diurnally changing molecular species of PC to promote flowering.

Nocturnal and diurnal activity of armored suckermouth catfish (Loricariidae: Pterygoplichthys) associated with wintering Florida manatees (Trichechus manatus latirostris)

USGS Publications Warehouse

Nico, Leo G.

2010-01-01

Several Pterygoplichthys species, members of the Neotropical catfish family Loricariidae, have been widely introduced outside their native ranges. In this paper, I present observations on the diel activity pattern of non-native Pterygoplichthys, tentatively identified as P. disjunctivus, with respect to their attachment and grazing on endangered Florida manatees, Trichechus manatus latirostris. The study was conducted in December 2009 at Volusia Blue Spring, an artesianal spring system in the St. Johns River basin, Florida (USA). Supplemented by information gathered during previous visits to the spring site, this study revealed that adult Pterygoplichthys are active throughout the diel period (day, twilight and night). However, juvenile Pterygoplichthys were largely nocturnal and only at night did they consistently join adults in attaching to manatees. The juveniles generally remain hidden during the day, probably responding to presence of diurnal predators, mainly birds. Differences in diel behaviors among different Pterygoplichthys size classes in Florida are consistent with published observations on loricariids inhabiting clearwater streams within their native ranges.

The onset of the solar active cycle 22

NASA Technical Reports Server (NTRS)

Ahluwalia, H. S.

1989-01-01

There is a great deal of interest in being able to predict the main characteristics of a solar activity cycle (SAC). One would like to know, for instance, how large the amplitude (R sub m) of a cycle is likely to be, i.e., the annual mean of the sunspot numbers at the maximum of SAC. Also, how long a cycle is likely to last, i.e., its period. It would also be interesting to be able to predict the details, like how steep the ascending phase of a cycle is likely to be. Questions like these are of practical importance to NASA in planning the launch schedule for the low altitude, expensive spacecrafts like the Hubble Space Telescope, the Space Station, etc. Also, one has to choose a proper orbit, so that once launched the threat of an atmospheric drag on the spacecraft is properly taken into account. Cosmic ray data seem to indicate that solar activity cycle 22 will surpass SAC 21 in activity. The value of R sub m for SAC 22 may approach that of SAC 19. It would be interesting to see whether this prediction is borne out. Researchers are greatly encouraged to proceed with the development of a comprehensive prediction model which includes information provided by cosmic ray data.

Patterns of fire activity over Indonesia and Malaysia from polar and geostationary satellite observations

NASA Astrophysics Data System (ADS)

Hyer, Edward J.; Reid, Jeffrey S.; Prins, Elaine M.; Hoffman, Jay P.; Schmidt, Christopher C.; Miettinen, Jukka I.; Giglio, Louis

2013-03-01

Biomass burning patterns over the Maritime Continent of Southeast Asia are examined using a new active fire detection product based on application of the Wildfire Automated Biomass Burning Algorithm (WF_ABBA) to data from the imagers on the MTSAT geostationary satellites operated by the Japanese space agency JAXA. Data from MTSAT-1R and MTSAT-2 covering 34 months from September 2008 to July 2011 are examined for a study region consisting of Indonesia, Malaysia, and nearby environs. The spatial and temporal distributions of fires detected in the MTSAT WF_ABBA product are described and compared with active fire observations from MODIS MOD14 data. Land cover distributions for the two instruments are examined using a new 250 m land cover product from the National University of Singapore. The two products show broadly similar patterns of fire activity, land cover distribution of fires, and pixel fire radiative power (FRP). However, the MTSAT WF_ABBA data differ from MOD14 in important ways. Relative to MODIS, the MTSAT WF_ABBA product has lower overall detection efficiency, but more fires detected due to more frequent looks, a greater relative fraction of fires in forest and a lower relative fraction of fires in open areas, and significantly higher single-pixel retrieved FRP. The differences in land cover distribution and FRP between the MTSAT and MODIS products are shown to be qualitatively consistent with expectations based on pixel size and diurnal sampling. The MTSAT WF_ABBA data are used to calculate coverage-corrected diurnal cycles of fire for different regions within the study area. These diurnal cycles are preliminary but demonstrate that the fraction of diurnal fire activity sampled by the two MODIS sensors varies significantly by region and vegetation type. Based on the results from comparison of the two fire products, a series of steps is outlined to account for some of the systematic biases in each of these satellite products in order to produce a

Seasonal and diurnal variations of ocular pressure in ocular hypertensive subjects in Pakistan.

PubMed

Qureshi, I A; Xiao, R X; Yang, B H; Zhang, J; Xiang, D W; Hui, J L

1999-05-01

Studies have been shown that intraocular pressure (IOP) shows a diurnal variation in ocular hypertensive subjects, but the amount of change differs from study to study. In recent years it has been noted that intraocular pressure is a dynamic function and is subjected to many influences both acutely and over the long term. The variability in the results may be due to negligence of factors that can affect IOP. Moreover, seasonal variations in the ocular hypertensive subjects have never been described. After placing control on those factors that can affect IOP, this study investigated seasonal and diurnal variations in IOP of ocular hypertensive subjects. IOP was measured each month over the course of 12 months with the Goldmann applanation tonometer in 91 ocular hypertensive male subjects. To see the diurnal changes, subjects were asked to stay in the hospital for 24 hours. The average IOP in the winter months was higher than those in spring, summer, and autumn. The IOP difference between winter and summer was (mean +/- sem) 2.9 +/- 0.9 mmHg (p < 0.001). The peak of mean IOP in diurnal variation curve (25.7 +/- 1.2 mmHg) appeared in the morning when the subjects had just awaken. The mean diurnal variation was found to be 4.2 +/- 0.6 mmHg (p < 0.001). This study confirms that seasons influence IOP and it shows diurnal variations. As compared to other nations, diurnal variations in ocular hypertensive subjects seem to be somewhat less in Pakistan. Knowledge of the seasonal and diurnal variations in IOP may help glaucoma screeners.

Chronotype, sleep loss, and diurnal pattern of salivary cortisol in a simulated daylong driving.

PubMed

Oginska, Halszka; Fafrowicz, Magdalena; Golonka, Krystyna; Marek, Tadeusz; Mojsa-Kaja, Justyna; Tucholska, Kinga

2010-07-01

The study focused on chronotype-related differences in subjective load assessment, sleepiness, and salivary cortisol pattern in subjects performing daylong simulated driving. Individual differences in work stress appraisal and psychobiological cost of prolonged load seem to be of importance in view of expanding compressed working time schedules. Twenty-one healthy, male volunteers (mean +/- SD: 27.9 +/- 4.9 yrs) were required to stay in semiconstant routine conditions. They performed four sessions (each lasting approximately 2.5 h) of simulated driving, i.e., completed chosen tasks from computer driving games. Saliva samples were collected after each driving session, i.e., at 10:00-11:00, 14:00-15:00, 18:00-19:00, and 22:00-23:00 h as well as 10-30 min after waking (between 05:00 and 06:00 h) and at bedtime (after 00:00 h). Two subgroups of subjects were distinguished on the basis of the Chronotype Questionnaire: morning (M)- and evening (E)-oriented types. Subjective data on sleep need, sleeping time preferences, sleeping problems, and the details of the preceding night were investigated by questionnaire. Subjective measures of task load (NASA Task Load Index [NASA-TLX]), activation (Thayer's Activation-Deactivation Adjective Check List [AD ACL]), and sleepiness (Karolinska Sleepiness Scale [KSS]) were applied at times of saliva samples collection. M- and E-oriented types differed significantly as to their ideal sleep length (6 h 54 min +/- 44 versus 8 h 13 min +/- 50 min), preferred sleep timing (midpoint at 03:19 versus 04:26), and sleep index, i.e., 'real-to-ideal' sleep ratio, before the experimental day (0.88 versus 0.67). Sleep deficit proved to be integrated with eveningness. M and E types exhibited similar diurnal profiles of energy, tiredness, tension, and calmness assessed by AD ACL, but E types estimated higher their workload (NASA-TLX) and sleepiness (KSS). M types exhibited a trend of higher mean cortisol levels than E types (F = 4.192, p < .056) and

Circadian rhythms of locomotor activity in the subterranean Mashona mole rat, Cryptomys darlingi.

PubMed

Vasicek, Caroline A; Oosthuizen, Maria K; Cooper, Howard M; Bennett, Nigel C

2005-02-15

The Mashona mole rat, Cryptomys darlingi, is a social, subterranean African rodent that is rarely, if ever, exposed to light, and that exhibits a regressed visual system. This study investigated locomotor activity patterns of Mashona mole rats (n=12) under different light cycles. Activity was measured using either infrared captors (n=8) or running wheels (n=4). The mole rats entrained their activity to a standard (LD 12:12) photoperiod. They displayed either a nocturnal or diurnal activity preference with one bout of activity and one bout of rest. Therefore, as a species, the Mashona mole rat did not show a clear nocturnal or diurnal activity preference. When the LD (12:12) light cycle was inversed, the animals switched their activity, too. Under constant dark (DD), most mole rats (73%) showed a free-running circadian activity rhythm, but under constant light (LL), only some (36%) did. The free-run period of the rhythm (tau) ranged from 23.83 to 24.10 h. The remaining animals were arrhythmic. There was large interindividual and intraindividual variations in the rate and extent of entrainment, time of activity preference, and activity patterns. Possible reasons for the observed variations are discussed. It is concluded that the Mashona mole rat has an endogenous activity rhythm which approximates 24 h, that the mole rat can distinguish between light and dark, and that the endogenous clock utilises this photic information as a zeitgeber.

The transition from day-to-night activity is a risk factor for the development of CNS oxygen toxicity in the diurnal fat sand rat (Psammomys obesus).

PubMed

Eynan, Mirit; Biram, Adi; Mullokandov, Michael; Kronfeld-Schor, Noga; Paz-Cohen, Rotem; Menajem, Dvir; Arieli, Yehuda

2017-01-01

Performance and safety are impaired in employees engaged in shift work. Combat divers who use closed-circuit oxygen diving apparatus undergo part of their training during the night hours. The greatest risk involved in diving with such apparatus is the development of central nervous system oxygen toxicity (CNS-OT). We investigated whether the switch from day-to-night activity may be a risk factor for the development of CNS-OT using a diurnal animal model, the fat sand rat (Psammomys obesus). Animals were kept on a 12:12 light-dark schedule (6 a.m. to 6 p.m. at 500 lx). The study included two groups: (1) Control group: animals were kept awake and active during the day, between 09:00 and 15:00. (2) Experimental group: animals were kept awake and active during the night, between 21:00 and 03:00, when they were exposed to dim light in order to simulate the conditions prevalent during combat diver training. This continued for a period of 3 weeks, 5 days a week. On completion of this phase, 6-sulphatoxymelatonin (6-SMT) levels in urine were determined over a period of 24 h. Animals were then exposed to hyperbaric oxygen (HBO). To investigate the effect of acute melatonin administration, melatonin (50 mg/kg) or its vehicle was administered to the animals in both groups 20 min prior to HBO exposure. After the exposure, the activity of superoxide dismutase, catalase and glutathione peroxidase was measured, as were the levels of neuronal nitric oxide synthase (nNOS) and overall nitrotyrosylation in the cortex and hippocampus. Latency to CNS-OT was significantly reduced after the transition from day-to-night activity. This was associated with alterations in the level of melatonin metabolites secreted in the urine. Acute melatonin administration had no effect on latency to CNS-OT in either of the groups. Nevertheless, the activity of superoxide dismutase and catalase, as well as nitrotyrosine and nNOS levels, were altered in the hippocampus following melatonin

Large Starspot Groups on HAT-P-11 in Activity Cycle 1

NASA Astrophysics Data System (ADS)

Morris, Brett M.; Hawley, Suzanne L.; Hebb, Leslie

2018-02-01

HAT-P-11 is a planet-hosting K4V star in the Kepler field, with an activity cycle that bear similarities to the Sun's. The chromospheric activity of HAT-P-11 indicates that a new activity cycle is beginning. We report ground-based observations with holographic diffuser photometry to measure the starspots of HAT-P-11 in its second observed magnetic activity cycle (Cycle 1). We find the area coverage of starspots within the transit chord for UTC 2017-10-30 is 14% --- which makes this transit the most spotted HAT-P-11 transit observed to date. We suggest that we are likely observing occultations of large spot groups appearing at the beginning of Cycle 1.

Diurnal water relations of walnut trees - Implications for remote sensing

NASA Technical Reports Server (NTRS)

Weber, James A.; Ustin, Susan L.

1991-01-01

Leaflet water content (WC), relative water content (RWC), and water potential, Phi(lf) were measured as indicators of diurnal change in tree water status in an experimental walnut orchard receiving two irrigation treatments: 100 and 33 percent of potential evapotranspiration (PET). Diurnal change was greatest in Phi(lf) throughout the experimental period, with minima occurring each day in early to mid-afternoon and maxima between midnight and sunrise. Leaflet WC and RWC were lower in the afternoon than at night, but had greater variability so that the diurnal pattern was not as clear. Comparison between the pattern of Phi(lf) and dielectric constants (DCs) measured from probes inserted 2 cm into a tree hole showed that both declined nearly in parallel in the morning. Phi(lf) recovered more rapidly than DC in the afternoon. This temporal discrepancy could be caused by cavitation of xylem elements in the vicinity of the DC probe. Microwave backscatter for L- and X-bands also measured diurnal variation that had local minima in the afternoon, but the pattern among wavelength and polarization signatures was complex.

Ad Hoc working group on diurnal and semi-diurnal Earth Orientation variation.

NASA Astrophysics Data System (ADS)

Gipson, J. M.

2017-12-01

Diurnal and semi-diurnal Earth orientation ("HF-EOP") variation were detected in the early 1990s in SLR and VLBI data. Beginning in 1996 a model of HF-EOP variation based on ocean-tides derived from Topex data was included in the IERS standards. This model has not been updated since then with the exception of including libration for effects for polar motion (2003 IERS conventions) and UT1 (2010 IERS conventions). The accuracy of Space Geodesy has increased remarkably over the last 20 years and the 1996 IERS HF-EOP model is no longer adequate. At the conclusion of the 2017 GGOS/IERS Unified Analysis Workshop an ad hoc working group was formed including representatives of the IDS, IGS, ILRS, and IVS. The goal of the working group is to test several models of HF-EOP in the different space geodesy techniques and to make a recommendation to the IERS for the adoption of a new HF-EOP model. In this presentation I will give a summary of work on HF-EOP done to date by various scientists which demonstrate the inadequacy of the current IERS HF-EOP model. I will then describe the goals and the progress of the working group to date, with a preview of further work.

Differences in ocular parameters between diurnal and nocturnal raptors.

PubMed

Beckwith-Cohen, Billie; Horowitz, Igal; Bdolah-Abram, Tali; Lublin, Avishai; Ofri, Ron

2015-01-01

To establish and compare normal ocular parameters between and within diurnal and nocturnal raptor groups. Eighty-eight ophthalmically normal raptors of six nocturnal and 11 diurnal species were studied. Tear production was measured using Schirmer tear test (STT) and phenol red thread test (PRTT), and applanation tonometry was conducted. Ultrasonographic measurements of axial length (AL), mediolateral axis (ML), vitreous body (VB), and pecten length (PL) were recorded, and conjunctival cultures were obtained. A weak correlation (R = 0.312, P = 0.006) was found between PRTT and STT. Tear production was significantly lower in nocturnal species (P < 0.001), but no difference was observed in intraocular pressure (IOP). VB and PL were significantly longer in diurnals (P < 0.001 and P = 0.021, respectively), and no significant difference was observed in AL and ML. When comparing results within these groups, there was a significant difference between most species for all parameters except IOP. Fifty-one percent of the examined raptors were positive for mycology or bacteriology, either on culture or PCR. The most common infectious agent isolated was Staphylococcus spp. Phenol red thread test and STT are both valid methods to measure tear production; however, a separate baseline must be determined for each species using these methods, as the results of one method cannot be extrapolated to the other. Due to significant differences observed within diurnal and nocturnal species, it appears that a more intricate division should be used when comparing these parameters for raptors, and the classification of diurnal or nocturnal holds little significance in the baseline of these data. © 2013 American College of Veterinary Ophthalmologists.

Diurnal variations of Titan's ionosphere

NASA Astrophysics Data System (ADS)

Cui, J.; Galand, M.; Yelle, R. V.; Vuitton, V.; Wahlund, J.-E.; Lavvas, P. P.; Müller-Wodarg, I. C. F.; Cravens, T. E.; Kasprzak, W. T.; Waite, J. H.

2009-06-01

We present our analysis of the diurnal variations of Titan's ionosphere (between 1000 and 1300 km) based on a sample of Ion Neutral Mass Spectrometer (INMS) measurements in the Open Source Ion (OSI) mode obtained from eight close encounters of the Cassini spacecraft with Titan. Although there is an overall ion depletion well beyond the terminator, the ion content on Titan's nightside is still appreciable, with a density plateau of ˜700 cm-3 below ˜1300 km. Such a plateau is a combined result of significant depletion of light ions and modest depletion of heavy ones on Titan's nightside. We propose that the distinctions between the diurnal variations of light and heavy ions are associated with their different chemical loss pathways, with the former primarily through “fast” ion-neutral chemistry and the latter through “slow” electron dissociative recombination. The strong correlation between the observed night-to-day ion density ratios and the associated ion lifetimes suggests a scenario in which the ions created on Titan's dayside may survive well to the nightside. The observed asymmetry between the dawn and dusk ion density profiles also supports such an interpretation. We construct a time-dependent ion chemistry model to investigate the effect of ion survival associated with solid body rotation alone as well as superrotating horizontal winds. For long-lived ions, the predicted diurnal variations have similar general characteristics to those observed. However, for short-lived ions, the model densities on the nightside are significantly lower than the observed values. This implies that electron precipitation from Saturn's magnetosphere may be an additional and important contributor to the densities of the short-lived ions observed on Titan's nightside.

Diurnal trends in methylmercury concentration in a wetland adjacent to Great Salt Lake, Utah, USA

USGS Publications Warehouse

Naftz, D.L.; Cederberg, J.R.; Krabbenhoft, D.P.; Beisner, K.R.; Whitehead, J.; Gardberg, J.

2011-01-01

A 24-h field experiment was conducted during July 2008 at a wetland on the eastern shore of Great Salt Lake (GSL) to assess the diurnal cycling of methylmercury (MeHg). Dissolved (<0.45??m) MeHg showed a strong diurnal variation with consistently decreasing concentrations during daylight periods and increasing concentrations during non-daylight periods. The proportion of MeHg relative to total Hg in the water column consistently decreased with increasing sunlight duration, indicative of photodegradation. During the field experiment, measured MeHg photodegradation rates ranged from 0.02 to 0.06ngL-1h-1. Convective overturn of the water column driven by nighttime cooling of the water surface was hypothesized as the likely mechanism to replace the MeHg in the water column lost via photodegradation processes. A hydrodynamic model of the wetland successfully simulated convective overturn of the water column during the field experiment. Study results indicate that daytime monitoring of selected wetlands surrounding GSL may significantly underestimate the MeHg content in the water column. Wetland managers should consider practices that maximize the photodegradation of MeHg during daylight periods. ?? 2011.

Cell cycle-coupled expansion of AR activity promotes cancer progression.

PubMed

McNair, C; Urbanucci, A; Comstock, C E S; Augello, M A; Goodwin, J F; Launchbury, R; Zhao, S G; Schiewer, M J; Ertel, A; Karnes, J; Davicioni, E; Wang, L; Wang, Q; Mills, I G; Feng, F Y; Li, W; Carroll, J S; Knudsen, K E

2017-03-23

The androgen receptor (AR) is required for prostate cancer (PCa) survival and progression, and ablation of AR activity is the first line of therapeutic intervention for disseminated disease. While initially effective, recurrent tumors ultimately arise for which there is no durable cure. Despite the dependence of PCa on AR activity throughout the course of disease, delineation of the AR-dependent transcriptional network that governs disease progression remains elusive, and the function of AR in mitotically active cells is not well understood. Analyzing AR activity as a function of cell cycle revealed an unexpected and highly expanded repertoire of AR-regulated gene networks in actively cycling cells. New AR functions segregated into two major clusters: those that are specific to cycling cells and retained throughout the mitotic cell cycle ('Cell Cycle Common'), versus those that were specifically enriched in a subset of cell cycle phases ('Phase Restricted'). Further analyses identified previously unrecognized AR functions in major pathways associated with clinical PCa progression. Illustrating the impact of these unmasked AR-driven pathways, dihydroceramide desaturase 1 was identified as an AR-regulated gene in mitotically active cells that promoted pro-metastatic phenotypes, and in advanced PCa proved to be highly associated with development of metastases, recurrence after therapeutic intervention and reduced overall survival. Taken together, these findings delineate AR function in mitotically active tumor cells, thus providing critical insight into the molecular basis by which AR promotes development of lethal PCa and nominate new avenues for therapeutic intervention.

A framework for global diurnally-resolved observations of Land Surface Temperature

NASA Astrophysics Data System (ADS)

Ghent, D.; Remedios, J.; Pinnock, S.

2013-12-01

Land surface temperature (LST) is the radiative skin temperature of the land, and is one of the key parameters in the physics of land-surface processes on regional and global scales. Being a key boundary condition in land surface models, which determine the surface to atmosphere fluxes of heat, water and carbon; thus influencing cloud cover, precipitation and atmospheric chemistry predictions within Global models, the requirement for global diurnal observations of LST is well founded. Earth Observation satellites offer an opportunity to obtain global coverage of LST, with the appropriate exploitation of data from multiple instruments providing a capacity to resolve the diurnal cycle on a global scale. Here we present a framework for the production of global, diurnally resolved, data sets for LST which is a key request from users of LST data. We will show how the sampling of both geostationary and low earth orbit data sets could conceptually be employed to build combined, multi-sensor, pole-to-pole data sets. Although global averages already exist for individual instruments and merging of geostationary based LST is already being addressed operationally (Freitas, et al., 2013), there are still a number of important challenges to overcome. In this presentation, we will consider three of the issues still open in LST remote sensing: 1) the consistency amongst retrievals; 2) the clear-sky bias and its quantification; and 3) merging methods and the propagation of uncertainties. For example, the combined use of both geostationary earth orbit (GEO) and low earth orbit (LEO) data, and both infra-red and microwave data are relatively unexplored but are necessary to make the most progress. Hence this study will suggest what is state-of-the-art and how considerable advances can be made, accounting also for recent improvements in techniques and data quality. The GlobTemperature initiative under the Data User Element of ESA's 4th Earth Observation Envelope Programme (2013

[Effects of diurnal warming on soil N2O emission in soybean field].

PubMed

Hu, Zheng-Hua; Zhou, Ying-Ping; Cui, Hai-Ling; Chen, Shu-Tao; Xiao, Qi-Tao; Liu, Yan

2013-08-01

To investigate the impact of experimental warming on N2O emission from soil of soybean field, outdoor experiments with simulating diurnal warming were conducted, and static dark chamber-gas chromatograph method was used to measure N2O emission fluxes. Results indicated that: the diurnal warming did not change the seasonal pattern of N2O emissions from soil. In the whole growing season, comparing to the control treatment (CK), the warming treatment (T) significantly enhanced the N2O flux and the cumulative amount of N2O by 17.31% (P = 0.019), and 20.27% (P = 0.005), respectively. The significant correlations were found between soil N2O emission and soil temperature, moisture. The temperature sensitivity values of soil N2O emission under CK and T treatments were 3.75 and 4.10, respectively. In whole growing stage, T treatment significantly increased the crop aboveground and total biomass, the nitrate reductase activity, and total nitrogen in leaves, while significantly decreased NO3(-) -N content in leaves. T treatment significantly increased soil NO3(-) -N content, but had no significant effect on soil organic carbon and total nitrogen contents. The results of this study suggested that diurnal warming enhanced N2O emission from soil in soybean field.

Diurnal variations in axial length, choroidal thickness, intraocular pressure, and ocular biometrics.

PubMed

Chakraborty, Ranjay; Read, Scott A; Collins, Michael J

2011-07-11

To investigate the pattern of diurnal variations in axial length (AL), choroidal thickness, intraocular pressure (IOP), and ocular biometrics over 2 consecutive days. Measurements of ocular biometrics and IOP were collected for 30 young adult subjects (15 myopes, 15 emmetropes) at 10 different times over 2 consecutive days. Five sets of measurements were collected each day at approximately 3-hour intervals, with the first measurement taken at ~9 AM and final measurement at ~9 PM. AL underwent significant diurnal variation (P < 0.0001) that was consistently observed across the 2 measurement days. The longest AL was typically observed at the second measurement session (mean time, 12:26) and the shortest AL at the final session of each day (mean time, 21:06). The mean diurnal change in AL was 0.032 ± 0.018 mm. Choroidal thickness underwent significant diurnal variation (mean change, 0.029 ± 0.016 mm; P < 0.001) and varied approximately in antiphase to the AL changes. Significant diurnal variations were also found in vitreous chamber depth (VCD; mean change, 0.06 ± 0.029 mm; P < 0.0001) and IOP (mean change, 3.54 ± 0.84 mm Hg; P < 0.0001). A positive association was found between the variations of AL and IOP (r(2) = 0.17, P < 0.0001) and AL and VCD (r(2) = 0.31, P < 0.0001) and a negative association between AL and choroidal thickness (r(2) = 0.13, P < 0.0001). There were no significant differences in the magnitude and timing of diurnal variations associated with refractive error. Significant diurnal variations in AL, choroidal thickness, and IOP were consistently observed over 2 consecutive days of testing.

Diurnal ocean surface layer model validation

NASA Technical Reports Server (NTRS)

Hawkins, Jeffrey D.; May, Douglas A.; Abell, Fred, Jr.

1990-01-01

The diurnal ocean surface layer (DOSL) model at the Fleet Numerical Oceanography Center forecasts the 24-hour change in a global sea surface temperatures (SST). Validating the DOSL model is a difficult task due to the huge areas involved and the lack of in situ measurements. Therefore, this report details the use of satellite infrared multichannel SST imagery to provide day and night SSTs that can be directly compared to DOSL products. This water-vapor-corrected imagery has the advantages of high thermal sensitivity (0.12 C), large synoptic coverage (nearly 3000 km across), and high spatial resolution that enables diurnal heating events to be readily located and mapped. Several case studies in the subtropical North Atlantic readily show that DOSL results during extreme heating periods agree very well with satellite-imagery-derived values in terms of the pattern of diurnal warming. The low wind and cloud-free conditions necessary for these events to occur lend themselves well to observation via infrared imagery. Thus, the normally cloud-limited aspects of satellite imagery do not come into play for these particular environmental conditions. The fact that the DOSL model does well in extreme events is beneficial from the standpoint that these cases can be associated with the destruction of the surface acoustic duct. This so-called afternoon effect happens as the afternoon warming of the mixed layer disrupts the sound channel and the propagation of acoustic energy.

Evidence for photometric activity cycles in 3203 Kepler stars

NASA Astrophysics Data System (ADS)

Reinhold, Timo; Cameron, Robert H.; Gizon, Laurent

2017-07-01

Context. In recent years it has been claimed that the length of stellar activity cycles is determined by the stellar rotation rate. It has been observed that the cycle period increases with rotation period along two distinct sequences, known as the active and inactive sequences. In this picture the Sun occupies a solitary position between the two sequences. Whether the Sun might undergo a transitional evolutionary stage is currently under debate. Aims: Our goal is to measure cyclic variations of the stellar light curve amplitude and the rotation period using four years of Kepler data. Periodic changes in the light curve amplitude or the stellar rotation period are associated with an underlying activity cycle. Methods: Using a recent sample of active stars we compute the rotation period and the variability amplitude for each individual Kepler quarter and search for periodic variations of both time series. To test for periodicity in each stellar time series we consider Lomb-Scargle periodograms and use a selection based on a false alarm probability (FAP). Results: We detect amplitude periodicities in 3203 stars between 0.5 < Pcyc < 6 yr covering rotation periods between 1 < Prot < 40 days. Given our sample size of 23 601 stars and our selection criteria that the FAP is less than 5%, this number is almost three times higher than that expected from pure noise. We do not detect periodicities in the rotation period beyond those expected from noise. Our measurements reveal that the cycle period shows a weak dependence on rotation rate, slightly increasing for longer rotation periods. We further show that the shape of the variability deviates from a pure sine curve, consistent with observations of the solar cycle. The cycle shape does not show a statistically significant dependence on effective temperature. Conclusions: We detect activity cycles in more than 13% of our final sample with a FAP of 5% (calculated by randomly shuffling the measured 90-day variability

Periodic cycles of social outbursts of activity

NASA Astrophysics Data System (ADS)

Berestycki, H.; Rossi, L.; Rodríguez, N.

2018-01-01

We study the long-time behavior of a 2 × 2 continuous dynamical system with a time-periodic source term which is either of cooperative-type or activator-inhibitor type. This system was recently introduced in the literature [2] to model the dynamics of social outbursts and consists of an explicit field measuring the level of activity and an implicit field measuring the effective tension. The system can be used to represent a general type of phenomena in which one variable exhibits self-excitement once the other variable has reached a critical value. The time-periodic source term allows one to analyze the effect that periodic external shocks to the system play in the dynamics of the outburst of activity. For cooperative systems we prove that for small shocks the level of activity dies down whereas, as the intensity of the shocks increases, the level of activity converges to a positive periodic solution (excited cycle). We further show that in some cases there is multiplicity of excited cycles. We derive a subset of these results for the activator-inhibitor system.

Stellar activity cycles from long-term data by robotic telescopes

NASA Astrophysics Data System (ADS)

Oláh, K.

2014-03-01

All results about stellar activity cycles stem from decades-long systematic observations that were done by small telescopes. Without these equipments we would not know much, if anything, about stellar activity cycles, like those we see and observe easily on the nearest star, the Sun. In the early 80's of the last century systematic photometric monitoring of active stars began with automated photometric telescopes (APTs), some of which continue the observations to date. The Vienna-Potsdam APT now works for about two decades (Strassmeier et al. 1997), similarly to the 4-College Consortium APT (Dukes et al. 1995), while the Catania APT (Rodono et al. 2001) was closed down a few years ago. These small tools with the same setups for decades do not cost much and are relatively cheap to maintain. The longest continuous photometric datasets of a few objects from APTs span now over 30 years, which, together with earlier, manually-obtained data allow to study those activity cycles of stars which are in the order of 10 years or shorter: to be sure in the timescale of a cycle it should be observed repeatedly at least 2-3 times. The spectroscopic automated telescope STELLA (Strassmeier et al. 2004), built in the first decade of this century, measured already a few dozens of radial velocity curves for long-period binary stars and measured their activity levels (Strassmeier et al. 2012); these results can be gathered only by robotic telescopes. Only with STELLA it is possible to study the decades-long behavior of starspots on active giants with long rotational periods via Doppler Imaging. As the databases were growing it became clear that stars, just as the Sun, had multiple cycles. It was also found that stellar cycles showed systematic changes and that the cycle lengths correlated with the rotational periods of the stars. Extensive summaries of stellar activity cycles are found in Baliunas et al. (1995) using the Mt. Wilson Ca-index survey, and Oláh et al. (2009) based on

Diurnal Change of Soil Carbon Flux of Binhai New District

NASA Astrophysics Data System (ADS)

Wang, T. F.; Mao, T. Y.; Ye, W.

2018-05-01

In order to investigate the factors influencing diurnal change of soil carbon flux of Binhai New District. Field observation experiments were carried out by using LC pro-SD photosynthetic apparatus. The diurnal changes of soil carbon flux and its environmental factors such as atmosphere temperature and soil temperature were analysed. The results indicated that soil carbon flux appeared single diurnal pattern. The diurnal average of soil carbon flux ranked from 0.2761 to 2.3367μmo1/m2/s. Soil carbon flux varied significantly among different land use regimes(P<0.001). Significant relationships were found between soil respiration rate and atmosphere temperature, which could he best described by exponential equations (P<0.05). The Q10 value was based on the exponential correlations. Its value of Tian Keyuan, ECO-city, Dagu-Outlet and Yongding-River was 8.331, 6.049, 2.651 and 1.391, respectively. There were quadratic correlations between soil carbon flux and soil temperature (10cm). And soil temperature could account for more than 32.27% of the soil carbon flux changes (P<0.05, R2=0.3227-0.7465).

Radio Imaging Observations of Solar Activity Cycle and Its Anomaly

NASA Astrophysics Data System (ADS)

Shibasaki, K.

2011-12-01

The 24th solar activity cycle has started and relative sunspot numbers are increasing. However, their rate of increase is rather slow compared to previous cycles. Active region sizes are small, lifetime is short, and big (X-class) flares are rare so far. We study this anomalous situation using data from Nobeyama Radioheliograph (NoRH). Radio imaging observations have been done by NoRH since 1992. Nearly 20 years of daily radio images of the Sun at 17 GHz are used to synthesize a radio butterfly diagram. Due to stable operation of the instrument and a robust calibration method, uniform datasets are available covering the whole period of observation. The radio butterfly diagram shows bright features corresponding to active region belts and their migration toward low latitude as the solar cycle progresses. In the present solar activity cycle (24), increase of radio brightness is delayed and slow. There are also bright features around both poles (polar brightening). Their brightness show solar cycle dependence but peaks around solar minimum. Comparison between the last minimum and the previous one shows decrease of its brightness. This corresponds to weakening of polar magnetic field activity between them. In the northern pole, polar brightening is already weakened in 2011, which means it is close to solar maximum in the northern hemisphere. Southern pole does not show such feature yet. Slow rise of activity in active region belt, weakening of polar activity during the minimum, and large north-south asymmetry in polar activity imply that global solar activity and its synchronization are weakening.

Estrogen alters the diurnal rhythm of alpha 1-adrenergic receptor densities in selected brain regions

DOE Office of Scientific and Technical Information (OSTI.GOV)

Weiland, N.G.; Wise, P.M.

Norepinephrine regulates the proestrous and estradiol-induced LH surge by binding to alpha 1-adrenergic receptors. The density of alpha 1-receptors may be regulated by estradiol, photoperiod, and noradrenergic neuronal activity. We wished to determine whether alpha 1-receptors exhibit a diurnal rhythm in ovariectomized and/or estradiol-treated female rats, whether estradiol regulates alpha 1-receptors in those areas of brain involved with LH secretion and/or sexual behavior, and whether the concentrations of alpha-receptors vary inversely relative to previously reported norepinephrine turnover patterns. Young female rats, maintained on a 14:10 light-dark cycle were ovariectomized. One week later, half of them were outfitted sc with Silasticmore » capsules containing estradiol. Groups of animals were decapitated 2 days later at 0300, 1000, 1300, 1500, 1800, and 2300 h. Brains were removed, frozen, and sectioned at 20 micron. Sections were incubated with (/sup 3/H)prazosin in Tris-HCl buffer, washed, dried, and exposed to LKB Ultrofilm. The densities of alpha 1-receptors were quantitated using a computerized image analysis system. In ovariectomized rats, the density of alpha 1-receptors exhibited a diurnal rhythm in the suprachiasmatic nucleus (SCN), medial preoptic nucleus (MPN), and pineal gland. In SCN and MPN, receptor concentrations were lowest during the middle of the day and rose to peak levels at 1800 h. In the pineal gland, the density of alpha 1-receptors was lowest at middark phase, rose to peak levels before lights on, and remained elevated during the day. Estradiol suppressed the density of alpha 1 binding sites in the SCN, MPN, median eminence, ventromedial nucleus, and the pineal gland but had no effect on the lateral septum. Estrogen treatment altered the rhythm of receptor densities in MPN, median eminence, and the pineal gland.« less

Diurnal influences on electrophysiological oscillations and coupling in the dorsal striatum and cerebellar cortex of the anesthetized rat

PubMed Central

Frederick, Ariana; Bourget-Murray, Jonathan; Chapman, C. Andrew; Amir, Shimon; Courtemanche, Richard

2014-01-01

Circadian rhythms modulate behavioral processes over a 24 h period through clock gene expression. What is largely unknown is how these molecular influences shape neural activity in different brain areas. The clock gene Per2 is rhythmically expressed in the striatum and the cerebellum and its expression is linked with daily fluctuations in extracellular dopamine levels and D2 receptor activity. Electrophysiologically, dopamine depletion enhances striatal local field potential (LFP) oscillations. We investigated if LFP oscillations and synchrony were influenced by time of day, potentially via dopamine mechanisms. To assess the presence of a diurnal effect, oscillatory power and coherence were examined in the striatum and cerebellum of rats under urethane anesthesia at four different times of day zeitgeber time (ZT1, 7, 13 and 19—indicating number of hours after lights turned on in a 12:12 h light-dark cycle). We also investigated the diurnal response to systemic raclopride, a D2 receptor antagonist. Time of day affected the proportion of LFP oscillations within the 0–3 Hz band and the 3–8 Hz band. In both the striatum and the cerebellum, slow oscillations were strongest at ZT1 and weakest at ZT13. A 3–8 Hz oscillation was present when the slow oscillation was lowest, with peak 3–8 Hz activity occurring at ZT13. Raclopride enhanced the slow oscillations, and had the greatest effect at ZT13. Within the striatum and with the cerebellum, 0–3 Hz coherence was greatest at ZT1, when the slow oscillations were strongest. Coherence was also affected the most by raclopride at ZT13. Our results suggest that neural oscillations in the cerebellum and striatum, and the synchrony between these areas, are modulated by time of day, and that these changes are influenced by dopamine manipulation. This may provide insight into how circadian gene transcription patterns influence network electrophysiology. Future experiments will address how these network alterations are

GEO Water Cycle Activities and Plans

NASA Astrophysics Data System (ADS)

Lawford, R.; Koike, T.; Ishida, C.; Grabs, W.

2008-12-01

The Group on Earth Observations (GEO) consists of more than 70 countries and 40 international organizations which are working together to develop the Global Earth Observation System of Systems (GEOSS). Since its launch in 2004, GEO has stimulated a wide range of activities related to data systems and their architecture, the development of science and technology to support observational programs, user interactions and interfaces, and capacity building. GEO tasks directed at Water Resources Management, one of the nine GEO Societal Benefit areas, are an integral part of these developments. They draw heavily upon the activities of the Integrated Global Water Cycle Observations (IGWCO) theme and on the activities and infrastructure provided through GEO and its committees. Within the GEO framework the water related activities have been focused on four specific tasks namely integrated data set development; information for floods, droughts and water management; water quality, and capacity building. Currently these efforts are being facilitated by the IGWCO theme that was formed under the former Integrated Global Observing Strategy Partnership (IGOS-P). With the dissolution of this partnership, other mechanisms, including the GEO Water Cycle Community of Practice, are being considered as new opportunitites for coordinating the work of the theme and the water-related GEO tasks. This talk provides a description of the GEO water tasks and reviews the progress that has been made in addressing them. It also provides a perspective on new opportunities and briefly describes some of the mechanisms, such as the Water Cycle Community of Practice, that could be expanded to coordinate a more comprehensive set of water tasks and greater community involvement.

Diurnal Cortisol Rhythm Is Associated With Increased Risky Decision Making in Older Adults

PubMed Central

Weller, Joshua A.; Buchanan, Tony W.; Shackleford, Crystal; Morganstern, Arielle; Hartman, Joshua J.; Yuska, Jonathan; Denburg, Natalie L.

2014-01-01

Although past research has suggested a link between chronic stress and both physical and mental well-being in older adults, less is known about the degree to which neuroendocrine markers of stress are associated with higher-order cognitive processes such as decision-making. In a sample of healthy older adults (55–85 years), we tested the degree to which variation in the diurnal cortisol rhythm, an index of hypothalamic-adrenal-pituitary axis dynamics, was related to differences in risky decision making. We found that diurnal cortisol fall predicted performance on the Cups Task, a risky decision making task that independently tests risk taking to achieve gains and risk taking to avoid losses. For potential gains, we found that greater risk-taking was associated with lower diurnal cortisol fall, independent of age or sex of the participant. For risks to avoid potential losses, we found that lower diurnal fall selectively was associated with suboptimal decision-making for men only. Compared to males with more typical diurnal fall, those who displayed lower diurnal fall made more risky choices and demonstrated lower sensitivity to the expected value of the risky choice. We integrate these results with the extant literature on the effects of stress on cognitive aging. PMID:24955995

Longitudinal synergies between cortisol reactivity and diurnal testosterone and antisocial behavior in young adolescents.

PubMed

Susman, Elizabeth J; Peckins, Melissa K; Bowes, Jacey L; Dorn, Lorah D

2017-10-01

The aims were to identify the correspondence between simultaneous, longitudinal changes in cortisol reactivity and diurnal testosterone and to test the hypothesis that cortisol reactivity and diurnal testosterone interact so as to influence antisocial behavior. Participants were 135 children and young adolescents assessed at 6-month intervals over 1 year. Upon enrollment girls were age 8, 10, or 12 years (N = 69, M = 10.06 years) and boys were age 9, 11, or 13 years (N = 66, M = 10.94 years). Assessments included Tanner staging by a nurse, cortisol reactivity (Trier Social Stress Test for Children), diurnal testosterone, and interviews and questionnaires. Growth models showed that cortisol reactivity and diurnal testosterone basal levels (intercept) and rate of change (slopes) were not related, suggesting different mechanisms of growth. Longitudinal regression analyses assessed cortisol reactivity and diurnal testosterone longitudinally. The interactions of cortisol reactivity and diurnal testosterone showed that when diurnal testosterone was low, boys with low cortisol reactivity were reported to have more behavior problems (i.e., oppositional defiant disorder symptoms and attention problems) than when testosterone was high. In addition, when diurnal testosterone was high, boys with high or moderate cortisol reactivity were significantly higher on total antisocial behavior, attention behavior problems, and oppositional defiant disorder symptoms than when testosterone was low or moderate. The results were similar but less frequent for girls. These findings advance the science of young adolescence by showing the interaction between preexisting sensitivity to stressors and the normative testosterone changes of puberty and antisocial behavior.