Diurnal oscillations of soybean circadian clock and drought responsive genes.

PubMed

Marcolino-Gomes, Juliana; Rodrigues, Fabiana Aparecida; Fuganti-Pagliarini, Renata; Bendix, Claire; Nakayama, Thiago Jonas; Celaya, Brandon; Molinari, Hugo Bruno Correa; de Oliveira, Maria Cristina Neves; Harmon, Frank G; Nepomuceno, Alexandre

2014-01-01

Rhythms produced by the endogenous circadian clock play a critical role in allowing plants to respond and adapt to the environment. While there is a well-established regulatory link between the circadian clock and responses to abiotic stress in model plants, little is known of the circadian system in crop species like soybean. This study examines how drought impacts diurnal oscillation of both drought responsive and circadian clock genes in soybean. Drought stress induced marked changes in gene expression of several circadian clock-like components, such as LCL1-, GmELF4- and PRR-like genes, which had reduced expression in stressed plants. The same conditions produced a phase advance of expression for the GmTOC1-like, GmLUX-like and GmPRR7-like genes. Similarly, the rhythmic expression pattern of the soybean drought-responsive genes DREB-, bZIP-, GOLS-, RAB18- and Remorin-like changed significantly after plant exposure to drought. In silico analysis of promoter regions of these genes revealed the presence of cis-elements associated both with stress and circadian clock regulation. Furthermore, some soybean genes with upstream ABRE elements were responsive to abscisic acid treatment. Our results indicate that some connection between the drought response and the circadian clock may exist in soybean since (i) drought stress affects gene expression of circadian clock components and (ii) several stress responsive genes display diurnal oscillation in soybeans.

Diurnal Oscillations of Soybean Circadian Clock and Drought Responsive Genes

PubMed Central

Marcolino-Gomes, Juliana; Rodrigues, Fabiana Aparecida; Fuganti-Pagliarini, Renata; Bendix, Claire; Nakayama, Thiago Jonas; Celaya, Brandon; Molinari, Hugo Bruno Correa; de Oliveira, Maria Cristina Neves; Harmon, Frank G.; Nepomuceno, Alexandre

2014-01-01

Rhythms produced by the endogenous circadian clock play a critical role in allowing plants to respond and adapt to the environment. While there is a well-established regulatory link between the circadian clock and responses to abiotic stress in model plants, little is known of the circadian system in crop species like soybean. This study examines how drought impacts diurnal oscillation of both drought responsive and circadian clock genes in soybean. Drought stress induced marked changes in gene expression of several circadian clock-like components, such as LCL1-, GmELF4- and PRR-like genes, which had reduced expression in stressed plants. The same conditions produced a phase advance of expression for the GmTOC1-like, GmLUX-like and GmPRR7-like genes. Similarly, the rhythmic expression pattern of the soybean drought-responsive genes DREB-, bZIP-, GOLS-, RAB18- and Remorin-like changed significantly after plant exposure to drought. In silico analysis of promoter regions of these genes revealed the presence of cis-elements associated both with stress and circadian clock regulation. Furthermore, some soybean genes with upstream ABRE elements were responsive to abscisic acid treatment. Our results indicate that some connection between the drought response and the circadian clock may exist in soybean since (i) drought stress affects gene expression of circadian clock components and (ii) several stress responsive genes display diurnal oscillation in soybeans. PMID:24475115

Long-term stability of diurnal salivary cortisol and alpha-amylase secretion patterns.

PubMed

Skoluda, Nadine; La Marca, Roberto; Gollwitzer, Mario; Müller, Andreas; Limm, Heribert; Marten-Mittag, Birgitt; Gündel, Harald; Angerer, Peter; Nater, Urs M

2017-06-01

This study aimed to investigate long-term stability and variability of diurnal cortisol and alpha-amylase patterns. Diurnal cortisol and alpha-amylase secretion patterns were assessed on a single workday with three waves of measurement across a total time period of 24months in 189 participants. Separate hierarchical linear models were analyzed, with and without a number of potential predictor variables (age, BMI, smoking, chronic stress, stress reactivity). While low long-term stability was found in diurnal cortisol, the stability of diurnal alpha-amylase was moderate across the time period of 24months. Several predictor variables had a positive impact on diurnal cortisol and alpha-amylase secretion patterns averaged across waves. Our findings underpin the notion that long-term stability is not necessarily warranted in longitudinal studies. It is important to choose an appropriate study design when attempting to disentangle clinically and biologically relevant changes from naturally occurring variations in diurnal cortisol and alpha-amylase. Copyright © 2017 Elsevier Inc. All rights reserved.

Transcriptome-wide analysis of differential gene expression in response to light:dark cycles in a model cnidarian.

PubMed

Leach, W B; Macrander, J; Peres, R; Reitzel, A M

2018-06-01

Animals respond to diurnal shifts in their environment with a combination of behavioral, physiological, and molecular changes to synchronize with regularly-timed external cues. Reproduction, movement, and metabolism in cnidarians have all been shown to be regulated by diurnal lighting, but the molecular mechanisms that may be responsible for these phenotypes remain largely unknown. The starlet sea anemone, Nematostella vectensis, has oscillating patterns of locomotion and respiration, as well as the molecular components of a putative circadian clock that may provide a mechanism for these light-induced responses. Here, we compare transcriptomic responses of N. vectensis when cultured under a diurnal lighting condition (12 h light: 12 h dark) with sea anemones cultured under constant darkness for 20 days. More than 3,000 genes (~13% of transcripts) had significant differences in expression between light and dark, with most genes having higher expression in the photoperiod. Following removal of the light cue 678 genes lost differential expression, suggesting that light-entrained gene expression by the circadian clock has temporal limits. Grouping of genes differentially expressed in light:dark conditions showed that cell cycle and transcription maintained diel expression in the absence of light, while many of the genes related to metabolism, antioxidants, immunity, and signal transduction lost differential expression without a light cue. Our data highlight the importance of diel light cycles on circadian mechanisms in this species, prompting new hypotheses for the role of photoreception in major biological processes, e.g., metabolism, immunity. Copyright © 2018 Elsevier Inc. All rights reserved.

Melatonin-induced CBF/DREB1s are essential for diurnal change of disease resistance and CCA1 expression in Arabidopsis.

PubMed

Shi, Haitao; Wei, Yunxie; He, Chaozu

2016-03-01

Melatonin (N-acetyl-5-methoxytryptamine) is an important regulator of circadian rhythms and immunity in animals. However, the diurnal changes of endogenous melatonin and melatonin-mediated diurnal change of downstream responses remain unclear in Arabidopsis. Using the publicly available microarray data, we found that the transcript levels of two melatonin synthesis genes (serotonin N-acetyltransferase (SNAT) and caffeate O-methyltransferase (COMT)) and endogenous melatonin level were regulated by diurnal cycles, with different magnitudes of change. Moreover, the transcripts of C-repeat-binding factors (CBFs)/Drought response element Binding 1 factors (DREB1s) were co-regulated by exogenous melatonin and diurnal changes, indicating the possible correlation among clock, endogenous melatonin level and AtCBFs expressions. Interestingly, diurnal change of plant immunity against Pst DC3000 and CIRCADIANCLOCK ASSOCIATED 1 (CCA1) expression were largely lost in AtCBFs knockdown line-amiR-1. Taken together, this study identifies the molecular pathway underlying the diurnal changes of immunity in Arabidopsis. Notably, the diurnal changes of endogenous melatonin may regulate corresponding changes of AtCBF/DREB1s expression and their underlying diurnal cycle of plant immunity and AtCCA1. Copyright © 2016 Elsevier Masson SAS. All rights reserved.

Blood-gene expression reveals reduced circadian rhythmicity in individuals resistant to sleep deprivation.

PubMed

Arnardottir, Erna S; Nikonova, Elena V; Shockley, Keith R; Podtelezhnikov, Alexei A; Anafi, Ron C; Tanis, Keith Q; Maislin, Greg; Stone, David J; Renger, John J; Winrow, Christopher J; Pack, Allan I

2014-10-01

To address whether changes in gene expression in blood cells with sleep loss are different in individuals resistant and sensitive to sleep deprivation. Blood draws every 4 h during a 3-day study: 24-h normal baseline, 38 h of continuous wakefulness and subsequent recovery sleep, for a total of 19 time-points per subject, with every 2-h psychomotor vigilance task (PVT) assessment when awake. Sleep laboratory. Fourteen subjects who were previously identified as behaviorally resistant (n = 7) or sensitive (n = 7) to sleep deprivation by PVT. Thirty-eight hours of continuous wakefulness. We found 4,481 unique genes with a significant 24-h diurnal rhythm during a normal sleep-wake cycle in blood (false discovery rate [FDR] < 5%). Biological pathways were enriched for biosynthetic processes during sleep. After accounting for circadian effects, two genes (SREBF1 and CPT1A, both involved in lipid metabolism) exhibited small, but significant, linear changes in expression with the duration of sleep deprivation (FDR < 5%). The main change with sleep deprivation was a reduction in the amplitude of the diurnal rhythm of expression of normally cycling probe sets. This reduction was noticeably higher in behaviorally resistant subjects than sensitive subjects, at any given P value. Furthermore, blood cell type enrichment analysis showed that the expression pattern difference between sensitive and resistant subjects is mainly found in cells of myeloid origin, such as monocytes. Individual differences in behavioral effects of sleep deprivation are associated with differences in diurnal amplitude of gene expression for genes that show circadian rhythmicity. © 2014 Associated Professional Sleep Societies, LLC.

Insights into the diurnal cycle of global Earth outgoing radiation using a numerical weather prediction model

NASA Astrophysics Data System (ADS)

Gristey, Jake J.; Chiu, J. Christine; Gurney, Robert J.; Morcrette, Cyril J.; Hill, Peter G.; Russell, Jacqueline E.; Brindley, Helen E.

2018-04-01

A globally complete, high temporal resolution and multiple-variable approach is employed to analyse the diurnal cycle of Earth's outgoing energy flows. This is made possible via the use of Met Office model output for September 2010 that is assessed alongside regional satellite observations throughout. Principal component analysis applied to the long-wave component of modelled outgoing radiation reveals dominant diurnal patterns related to land surface heating and convective cloud development, respectively explaining 68.5 and 16.0 % of the variance at the global scale. The total variance explained by these first two patterns is markedly less than previous regional estimates from observations, and this analysis suggests that around half of the difference relates to the lack of global coverage in the observations. The first pattern is strongly and simultaneously coupled to the land surface temperature diurnal variations. The second pattern is strongly coupled to the cloud water content and height diurnal variations, but lags the cloud variations by several hours. We suggest that the mechanism controlling the delay is a moistening of the upper troposphere due to the evaporation of anvil cloud. The short-wave component of modelled outgoing radiation, analysed in terms of albedo, exhibits a very dominant pattern explaining 88.4 % of the variance that is related to the angle of incoming solar radiation, and a second pattern explaining 6.7 % of the variance that is related to compensating effects from convective cloud development and marine stratocumulus cloud dissipation. Similar patterns are found in regional satellite observations, but with slightly different timings due to known model biases. The first pattern is controlled by changes in surface and cloud albedo, and Rayleigh and aerosol scattering. The second pattern is strongly coupled to the diurnal variations in both cloud water content and height in convective regions but only cloud water content in marine stratocumulus regions, with substantially shorter lag times compared with the long-wave counterpart. This indicates that the short-wave radiation response to diurnal cloud development and dissipation is more rapid, which is found to be robust in the regional satellite observations. These global, diurnal radiation patterns and their coupling with other geophysical variables demonstrate the process-level understanding that can be gained using this approach and highlight a need for global, diurnal observing systems for Earth outgoing radiation in the future.

Patterns of activity expressed by juvenile horseshoe crabs.

PubMed

Dubofsky, E A; Simpson, S D; Chabot, Christopher C; Watson, Winsor H

2013-09-01

Adult American horseshoe crabs, Limulus polyphemus, possess endogenous circadian and circatidal clocks controlling visual sensitivity and locomotion, respectively. The goal of this study was to determine the types of activity rhythms expressed by juvenile horseshoe crabs (n = 24) when exposed to a 14:10 light/dark cycle (LD) for 10 days, followed by 10 days of constant darkness (DD). Horseshoe crab activity was recorded with a digital time-lapse video system that used an infrared-sensitive camera so animals could be monitored at night. In LD, 15 animals expressed daily patterns of activity, 6 displayed a circatidal pattern, and the remaining 3 were arrhythmic. Of the 15 animals with daily patterns of locomotion, 7 had a significant preference (P < 0.05) for diurnal activity and 3 for nocturnal activity; the remainder did not express a significant preference for day or night activity. In DD, 13 horseshoe crabs expressed circatidal rhythms and 8 maintained a pattern of about 24 h. Although these results suggest the presence of a circadian clock influencing circatidal patterns of locomotion, these apparent circadian rhythms may actually represent the expression of just one of the two bouts of activity driven by the putative circalunidian clocks that control their tidal rhythms. Overall, these results indicate that, like adults, juvenile horseshoe crabs express both daily and tidal patterns of activity and that at least one, and maybe both, of these patterns is driven by endogenous clocks.

Systems Level Regulation of Rhythmic Growth Rate and Biomass Accumulation in Grasses

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kay, Steve A.; Hazen, Samuel; Mullet, John

Critical to the development of renewable energy sources from biofuels is the improvement of biomass from energy feedstocks, such as sorghum and maize. The specific goals of this project include 1) characterize the growth and gene expression patterns under diurnal and circadian conditions, 2) select transcription factors associated with growth and build a cis-regulatory network in yeast, and 3) perturb these transcription factors in planta using transgenic Brachypodium and sorghum, and characterize the phenotypic outcomes as they relate to biomass accumulation. A better understanding of diurnally regulated growth behavior in grasses may lead to species-specific mechanisms highly relevant to futuremore » strategies to optimize energy crop biomass yield.« less

Cold and hunger induce diurnality in a nocturnal mammal.

PubMed

van der Vinne, Vincent; Riede, Sjaak J; Gorter, Jenke A; Eijer, Willem G; Sellix, Michael T; Menaker, Michael; Daan, Serge; Pilorz, Violetta; Hut, Roelof A

2014-10-21

The mammalian circadian system synchronizes daily timing of activity and rest with the environmental light-dark cycle. Although the underlying molecular oscillatory mechanism is well studied, factors that influence phenotypic plasticity in daily activity patterns (temporal niche switching, chronotype) are presently unknown. Molecular evidence suggests that metabolism may influence the circadian molecular clock, but evidence at the level of the organism is lacking. Here we show that a metabolic challenge by cold and hunger induces diurnality in otherwise nocturnal mice. Lowering ambient temperature changes the phase of circadian light-dark entrainment in mice by increasing daytime and decreasing nighttime activity. This effect is further enhanced by simulated food shortage, which identifies metabolic balance as the underlying common factor influencing circadian organization. Clock gene expression analysis shows that the underlying neuronal mechanism is downstream from or parallel to the main circadian pacemaker (the hypothalamic suprachiasmatic nucleus) and that the behavioral phenotype is accompanied by phase adjustment of peripheral tissues. These findings indicate that nocturnal mammals can display considerable plasticity in circadian organization and may adopt a diurnal phenotype when energetically challenged. Our previously defined circadian thermoenergetics hypothesis proposes that such circadian plasticity, which naturally occurs in nocturnal mammals, reflects adaptive maintenance of energy balance. Quantification of energy expenditure shows that diurnality under natural conditions reduces thermoregulatory costs in small burrowing mammals like mice. Metabolic feedback on circadian organization thus provides functional benefits by reducing energy expenditure. Our findings may help to clarify relationships between sleep-wake patterns and metabolic phenotypes in humans.

Variability of CO2 concentrations and fluxes in and above an urban street canyon

NASA Astrophysics Data System (ADS)

Lietzke, Björn; Vogt, Roland

2013-08-01

The variability of CO2 concentrations and fluxes in dense urban environments is high due to the inherent heterogeneity of these complex areas and their spatio-temporally variable anthropogenic sources. With a focus on micro- to local-scale CO2-exchange processes, measurements were conducted in a street canyon in the city of Basel, Switzerland in 2010. CO2 fluxes were sampled at the top of the canyon (19 m) and at 39 m while vertical CO2 concentration profiles were measured in the center and at a wall of the canyon. CO2 concentration distributions in the street canyon and exchange processes with the layers above show, apart from expected general diurnal patterns due mixing layer heights, a strong dependence on wind direction relative to the canyon. As a consequence of the resulting corkscrew-like canyon vortex, accumulation of CO2 inside the canyon is modulated with distinct distribution patterns. The evaluation of diurnal traffic data provides good explanations for the vertical and horizontal differences in CO2-distribution inside the canyon. Diurnal flux characteristics at the top of the canyon can almost solely be explained with traffic density expressed by the strong linear dependence. Even the diurnal course of the flux at 39 m shows a remarkable relationship to traffic density for east wind conditions while, for west wind situations, a change toward source areas with lower emissions leads to a reduced flux.

Diurnal patterns of gas-exchange and metabolic pools in tundra plants during three phases of the arctic growing season.

PubMed

Patankar, Rajit; Mortazavi, Behzad; Oberbauer, Steven F; Starr, Gregory

2013-02-01

Arctic tundra plant communities are subject to a short growing season that is the primary period in which carbon is sequestered for growth and survival. This period is often characterized by 24-h photoperiods for several months a year. To compensate for the short growing season tundra plants may extend their carbon uptake capacity on a diurnal basis, but whether this is true remains unknown. Here, we examined in situ diurnal patterns of physiological activity and foliar metabolites during the early, mid, and late growing season in seven arctic species under light-saturated conditions. We found clear diurnal patterns in photosynthesis and respiration, with midday peaks and midnight lulls indicative of circadian regulation. Diurnal patterns in foliar metabolite concentrations were less distinct between the species and across seasons, suggesting that metabolic pools are likely governed by proximate external factors. This understanding of diurnal physiology will also enhance the parameterization of process-based models, which will aid in better predicting future carbon dynamics for the tundra. This becomes even more critical considering the rapid changes that are occurring circumpolarly that are altering plant community structure, function, and ultimately regional and global carbon budgets.

Global Profiling of Rice and Poplar Transcriptomes Highlights Key Conserved Circadian-Controlled Pathways and cis-Regulatory Modules

PubMed Central

Filichkin, Sergei A.; Breton, Ghislain; Priest, Henry D.; Dharmawardhana, Palitha; Jaiswal, Pankaj; Fox, Samuel E.; Michael, Todd P.; Chory, Joanne; Kay, Steve A.; Mockler, Todd C.

2011-01-01

Background Circadian clocks provide an adaptive advantage through anticipation of daily and seasonal environmental changes. In plants, the central clock oscillator is regulated by several interlocking feedback loops. It was shown that a substantial proportion of the Arabidopsis genome cycles with phases of peak expression covering the entire day. Synchronized transcriptome cycling is driven through an extensive network of diurnal and clock-regulated transcription factors and their target cis-regulatory elements. Study of the cycling transcriptome in other plant species could thus help elucidate the similarities and differences and identify hubs of regulation common to monocot and dicot plants. Methodology/Principal Findings Using a combination of oligonucleotide microarrays and data mining pipelines, we examined daily rhythms in gene expression in one monocotyledonous and one dicotyledonous plant, rice and poplar, respectively. Cycling transcriptomes were interrogated under different diurnal (driven) and circadian (free running) light and temperature conditions. Collectively, photocycles and thermocycles regulated about 60% of the expressed nuclear genes in rice and poplar. Depending on the condition tested, up to one third of oscillating Arabidopsis-poplar-rice orthologs were phased within three hours of each other suggesting a high degree of conservation in terms of rhythmic gene expression. We identified clusters of rhythmically co-expressed genes and searched their promoter sequences to identify phase-specific cis-elements, including elements that were conserved in the promoters of Arabidopsis, poplar, and rice. Conclusions/Significance Our results show that the cycling patterns of many circadian clock genes are highly conserved across poplar, rice, and Arabidopsis. The expression of many orthologous genes in key metabolic and regulatory pathways is diurnal and/or circadian regulated and phased to similar times of day. Our results confirm previous findings in Arabidopsis of three major classes of cis-regulatory modules within the plant circadian network: the morning (ME, GBOX), evening (EE, GATA), and midnight (PBX/TBX/SBX) modules. Identification of identical overrepresented motifs in the promoters of cycling genes from different species suggests that the core diurnal/circadian cis-regulatory network is deeply conserved between mono- and dicotyledonous species. PMID:21694767

Circadian clock-dependent and -independent rhythmic proteomes implement distinct diurnal functions in mouse liver.

PubMed

Mauvoisin, Daniel; Wang, Jingkui; Jouffe, Céline; Martin, Eva; Atger, Florian; Waridel, Patrice; Quadroni, Manfredo; Gachon, Frédéric; Naef, Felix

2014-01-07

Diurnal oscillations of gene expression controlled by the circadian clock underlie rhythmic physiology across most living organisms. Although such rhythms have been extensively studied at the level of transcription and mRNA accumulation, little is known about the accumulation patterns of proteins. Here, we quantified temporal profiles in the murine hepatic proteome under physiological light-dark conditions using stable isotope labeling by amino acids quantitative MS. Our analysis identified over 5,000 proteins, of which several hundred showed robust diurnal oscillations with peak phases enriched in the morning and during the night and related to core hepatic physiological functions. Combined mathematical modeling of temporal protein and mRNA profiles indicated that proteins accumulate with reduced amplitudes and significant delays, consistent with protein half-life data. Moreover, a group comprising about one-half of the rhythmic proteins showed no corresponding rhythmic mRNAs, indicating significant translational or posttranslational diurnal control. Such rhythms were highly enriched in secreted proteins accumulating tightly during the night. Also, these rhythms persisted in clock-deficient animals subjected to rhythmic feeding, suggesting that food-related entrainment signals influence rhythms in circulating plasma factors.

Circadian clock-dependent and -independent rhythmic proteomes implement distinct diurnal functions in mouse liver

PubMed Central

Mauvoisin, Daniel; Wang, Jingkui; Jouffe, Céline; Martin, Eva; Atger, Florian; Waridel, Patrice; Quadroni, Manfredo; Gachon, Frédéric; Naef, Felix

2014-01-01

Diurnal oscillations of gene expression controlled by the circadian clock underlie rhythmic physiology across most living organisms. Although such rhythms have been extensively studied at the level of transcription and mRNA accumulation, little is known about the accumulation patterns of proteins. Here, we quantified temporal profiles in the murine hepatic proteome under physiological light–dark conditions using stable isotope labeling by amino acids quantitative MS. Our analysis identified over 5,000 proteins, of which several hundred showed robust diurnal oscillations with peak phases enriched in the morning and during the night and related to core hepatic physiological functions. Combined mathematical modeling of temporal protein and mRNA profiles indicated that proteins accumulate with reduced amplitudes and significant delays, consistent with protein half-life data. Moreover, a group comprising about one-half of the rhythmic proteins showed no corresponding rhythmic mRNAs, indicating significant translational or posttranslational diurnal control. Such rhythms were highly enriched in secreted proteins accumulating tightly during the night. Also, these rhythms persisted in clock-deficient animals subjected to rhythmic feeding, suggesting that food-related entrainment signals influence rhythms in circulating plasma factors. PMID:24344304

A component of retinal light adaptation mediated by the thyroid hormone cascade.

PubMed

Bedolla, Diana E; Torre, Vincent

2011-01-01

Analysis with DNA-microrrays and real time PCR show that several genes involved in the thyroid hormone cascade, such as deiodinase 2 and 3 (Dio2 and Dio3) are differentially regulated by the circadian clock and by changes of the ambient light. The expression level of Dio2 in adult rats (2-3 months of age) kept continuously in darkness is modulated by the circadian clock and is up-regulated by 2 fold at midday. When the diurnal ambient light was on, the expression level of Dio2 increased by 4-8 fold and a consequent increase of the related protein was detected around the nuclei of retinal photoreceptors and of neurons in inner and outer nuclear layers. The expression level of Dio3 had a different temporal pattern and was down-regulated by diurnal light. Our results suggest that DIO2 and DIO3 have a role not only in the developing retina but also in the adult retina and are powerfully regulated by light. As the thyroid hormone is a ligand-inducible transcription factor controlling the expression of several target genes, the transcriptional activation of Dio2 could be a novel genomic component of light adaptation.

A Component of Retinal Light Adaptation Mediated by the Thyroid Hormone Cascade

PubMed Central

Bedolla, Diana E.; Torre, Vincent

2011-01-01

Analysis with DNA-microrrays and real time PCR show that several genes involved in the thyroid hormone cascade, such as deiodinase 2 and 3 (Dio2 and Dio3) are differentially regulated by the circadian clock and by changes of the ambient light. The expression level of Dio2 in adult rats (2–3 months of age) kept continuously in darkness is modulated by the circadian clock and is up-regulated by 2 fold at midday. When the diurnal ambient light was on, the expression level of Dio2 increased by 4–8 fold and a consequent increase of the related protein was detected around the nuclei of retinal photoreceptors and of neurons in inner and outer nuclear layers. The expression level of Dio3 had a different temporal pattern and was down-regulated by diurnal light. Our results suggest that DIO2 and DIO3 have a role not only in the developing retina but also in the adult retina and are powerfully regulated by light. As the thyroid hormone is a ligand-inducible transcription factor controlling the expression of several target genes, the transcriptional activation of Dio2 could be a novel genomic component of light adaptation. PMID:22039463

CsPLDalpha1 and CsPLDgamma1 are differentially induced during leaf and fruit abscission and diurnally regulated in Citrus sinensis.

PubMed

Malladi, Anish; Burns, Jacqueline K

2008-01-01

Understanding leaf and fruit abscission is essential in order to develop strategies for controlling the process in fruit crops. Mechanisms involved in signalling leaf and fruit abscission upon induction by abscission agents were investigated in Citrus sinensis cv. 'Valencia'. Previous studies have suggested a role for phospholipid signalling; hence, two phospholipase D cDNA sequences, CsPLDalpha1 and CsPLDgamma1, were isolated and their role was examined. CsPLDalpha1 expression was reduced in leaves but unaltered in fruit peel tissue treated with an ethylene-releasing compound (ethephon), or a fruit-specific abscission agent, 5-chloro-3-methyl-4-nitro-1H-pyrazole (CMNP). By contrast, CsPLDgamma1 expression was up-regulated within 6 h (leaves) and 24 h (fruit peel) after treatment with ethephon or CMNP, respectively. CsPLDalpha1 expression was diurnally regulated in leaf blade but not fruit peel. CsPLDgamma1 exhibited strong diurnal oscillation in expression in leaves and fruit peel with peak expression around midday. While diurnal fluctuation in CsPLDalpha1 expression appeared to be light-entrained in leaves, CsPLDgamma1 expression was regulated by light and the circadian clock. The diurnal expression of both genes was modulated by ethylene-signalling. The ethephon-induced leaf abscission and the ethephon- and CMNP-induced decrease in fruit detachment force were enhanced by application during rising diurnal expression of CsPLDgamma1. The results indicate differential regulation of CsPLDalpha1 and CsPLDgamma1 in leaves and fruit, and suggest possible roles for PLD-dependent signalling in regulating abscission responses in citrus.

CsPLDα1 and CsPLDγ1 are differentially induced during leaf and fruit abscission and diurnally regulated in Citrus sinensis

PubMed Central

Malladi, Anish; Burns, Jacqueline K.

2008-01-01

Understanding leaf and fruit abscission is essential in order to develop strategies for controlling the process in fruit crops. Mechanisms involved in signalling leaf and fruit abscission upon induction by abscission agents were investigated in Citrus sinensis cv. ‘Valencia’. Previous studies have suggested a role for phospholipid signalling; hence, two phospholipase D cDNA sequences, CsPLDα1 and CsPLDγ1, were isolated and their role was examined. CsPLDα1 expression was reduced in leaves but unaltered in fruit peel tissue treated with an ethylene-releasing compound (ethephon), or a fruit-specific abscission agent, 5-chloro-3-methyl-4-nitro-1H-pyrazole (CMNP). By contrast, CsPLDγ1 expression was up-regulated within 6 h (leaves) and 24 h (fruit peel) after treatment with ethephon or CMNP, respectively. CsPLDα1 expression was diurnally regulated in leaf blade but not fruit peel. CsPLDγ1 exhibited strong diurnal oscillation in expression in leaves and fruit peel with peak expression around midday. While diurnal fluctuation in CsPLDα1 expression appeared to be light-entrained in leaves, CsPLDγ1 expression was regulated by light and the circadian clock. The diurnal expression of both genes was modulated by ethylene-signalling. The ethephon-induced leaf abscission and the ethephon- and CMNP-induced decrease in fruit detachment force were enhanced by application during rising diurnal expression of CsPLDγ1. The results indicate differential regulation of CsPLDα1 and CsPLDγ1 in leaves and fruit, and suggest possible roles for PLD-dependent signalling in regulating abscission responses in citrus. PMID:18799715

Contemporary Model Fidelity over the Maritime Continent: Examination of the Diurnal Cycle, Synoptic, Intraseasonal and Seasonal Variability

NASA Astrophysics Data System (ADS)

Baranowski, D.; Waliser, D. E.; Jiang, X.

2016-12-01

One of the key challenges in subseasonal weather forecasting is the fidelity in representing the propagation of the Madden-Julian Oscillation (MJO) across the Maritime Continent (MC). In reality both propagating and non-propagating MJO events are observed, but in numerical forecast the latter group largely dominates. For this study, comprehensive model performances are evaluated using metrics that utilize the mean precipitation pattern and the amplitude and phase of the diurnal cycle, with a particular focus on the linkage between a model's local MC variability and its fidelity in representing propagation of the MJO and equatorial Kelvin waves across the MC. Subseasonal to seasonal variability of mean precipitation and its diurnal cycle in 20 year long climate simulations from over 20 general circulation models (GCMs) is examined to benchmark model performance. Our results show that many models struggle to represent the precipitation pattern over complex Maritime Continent terrain. Many models show negative biases of mean precipitation and amplitude of its diurnal cycle; these biases are often larger over land than over ocean. Furthermore, only a handful of models realistically represent the spatial variability of the phase of the diurnal cycle of precipitation. Models tend to correctly simulate the timing of the diurnal maximum of precipitation over ocean during local solar time morning, but fail to acknowledge influence of the land, with the timing of the maximum of precipitation there occurring, unrealistically, at the same time as over ocean. The day-to-day and seasonal variability of the mean precipitation follows observed patterns, but is often unrealistic for the diurnal cycle amplitude. The intraseasonal variability of the amplitude of the diurnal cycle of precipitation is mainly driven by model's ability (or lack of) to produce eastward propagating MJO-like signal. Our results show that many models tend to decrease apparent air-sea contrast in the mean precipitation and diurnal cycle of precipitation patterns over the Maritime Continent. As a result, the complexity of those patterns is heavily smoothed, to such an extent in some models that the Maritime Continent features and imprint is almost unrecognizable relative to the eastern Indian Ocean or Western Pacific.

Blood-Gene Expression Reveals Reduced Circadian Rhythmicity in Individuals Resistant to Sleep Deprivation

PubMed Central

Arnardottir, Erna S.; Nikonova, Elena V.; Shockley, Keith R.; Podtelezhnikov, Alexei A.; Anafi, Ron C.; Tanis, Keith Q.; Maislin, Greg; Stone, David J.; Renger, John J.; Winrow, Christopher J.; Pack, Allan I.

2014-01-01

Study Objectives: To address whether changes in gene expression in blood cells with sleep loss are different in individuals resistant and sensitive to sleep deprivation. Design: Blood draws every 4 h during a 3-day study: 24-h normal baseline, 38 h of continuous wakefulness and subsequent recovery sleep, for a total of 19 time-points per subject, with every 2-h psychomotor vigilance task (PVT) assessment when awake. Setting: Sleep laboratory. Participants: Fourteen subjects who were previously identified as behaviorally resistant (n = 7) or sensitive (n = 7) to sleep deprivation by PVT. Intervention: Thirty-eight hours of continuous wakefulness. Measurements and Results: We found 4,481 unique genes with a significant 24-h diurnal rhythm during a normal sleep-wake cycle in blood (false discovery rate [FDR] < 5%). Biological pathways were enriched for biosynthetic processes during sleep. After accounting for circadian effects, two genes (SREBF1 and CPT1A, both involved in lipid metabolism) exhibited small, but significant, linear changes in expression with the duration of sleep deprivation (FDR < 5%). The main change with sleep deprivation was a reduction in the amplitude of the diurnal rhythm of expression of normally cycling probe sets. This reduction was noticeably higher in behaviorally resistant subjects than sensitive subjects, at any given P value. Furthermore, blood cell type enrichment analysis showed that the expression pattern difference between sensitive and resistant subjects is mainly found in cells of myeloid origin, such as monocytes. Conclusion: Individual differences in behavioral effects of sleep deprivation are associated with differences in diurnal amplitude of gene expression for genes that show circadian rhythmicity. Citation: Arnardottir ES, Nikonova EV, Shockley KR, Podtelezhnikov AA, Anafi RC, Tanis KQ, Maislin G, Stone DJ, Renger JJ, Winrow CJ, Pack AI. Blood-gene expression reveals reduced circadian rhythmicity in individuals resistant to sleep deprivation. SLEEP 2014;37(10):1589-1600. PMID:25197809

Early meteorological results from the viking 2 lander.

PubMed

Hess, S L; Henry, R M; Leovy, C B; Mitchell, J L; Ryan, J A; Tillman, J E

1976-12-11

Early results from the meteorological instruments on the Viking 2 lander are presented. As on lander 1, the daily patterns of temperature, wind, and pressure have been highly repetitive during the early summer period. The average daily maximum temperature was 241 degrees K and the diurnal minimum was 191 degrees K. The wind has a vector mean of 0.7 meter per second from the southeast with a diurnal amplitude of 3 meters per second. Pressure exhibits both diurnal and semidiurnal oscillations, although of substantially smaller amplitude than those of lander 1. Departures from the repetitive diurnal patterns begin to appear on sol 37.

Aerobic Toluene Degraders in the Rhizosphere of a Constructed Wetland Model Show Diurnal Polyhydroxyalkanoate Metabolism.

PubMed

Lünsmann, Vanessa; Kappelmeyer, Uwe; Taubert, Anja; Nijenhuis, Ivonne; von Bergen, Martin; Heipieper, Hermann J; Müller, Jochen A; Jehmlich, Nico

2016-07-15

Constructed wetlands (CWs) are successfully applied for the treatment of waters contaminated with aromatic compounds. In these systems, plants provide oxygen and root exudates to the rhizosphere and thereby stimulate microbial degradation processes. Root exudation of oxygen and organic compounds depends on photosynthetic activity and thus may show day-night fluctuations. While diurnal changes in CW effluent composition have been observed, information on respective fluctuations of bacterial activity are scarce. We investigated microbial processes in a CW model system treating toluene-contaminated water which showed diurnal oscillations of oxygen concentrations using metaproteomics. Quantitative real-time PCR was applied to assess diurnal expression patterns of genes involved in aerobic and anaerobic toluene degradation. We observed stable aerobic toluene turnover by Burkholderiales during the day and night. Polyhydroxyalkanoate synthesis was upregulated in these bacteria during the day, suggesting that they additionally feed on organic root exudates while reutilizing the stored carbon compounds during the night via the glyoxylate cycle. Although mRNA copies encoding the anaerobic enzyme benzylsuccinate synthase (bssA) were relatively abundant and increased slightly at night, the corresponding protein could not be detected in the CW model system. Our study provides insights into diurnal patterns of microbial processes occurring in the rhizosphere of an aquatic ecosystem. Constructed wetlands are a well-established and cost-efficient option for the bioremediation of contaminated waters. While it is commonly accepted knowledge that the function of CWs is determined by the interplay of plants and microorganisms, the detailed molecular processes are considered a black box. Here, we used a well-characterized CW model system treating toluene-contaminated water to investigate the microbial processes influenced by diurnal plant root exudation. Our results indicated stable aerobic toluene degradation by members of the Burkholderiales during the day and night. Polyhydroxyalkanoate synthesis in these bacteria was higher during the day, suggesting that they additionally fed on organic root exudates and reutilized the stored carbon compounds during the night. Our study illuminates microbial processes occurring in the rhizosphere of an aquatic ecosystem. Copyright © 2016, American Society for Microbiology. All Rights Reserved.

Aerobic Toluene Degraders in the Rhizosphere of a Constructed Wetland Model Show Diurnal Polyhydroxyalkanoate Metabolism

PubMed Central

Lünsmann, Vanessa; Kappelmeyer, Uwe; Taubert, Anja; Nijenhuis, Ivonne; von Bergen, Martin; Müller, Jochen A.; Jehmlich, Nico

2016-01-01

ABSTRACT Constructed wetlands (CWs) are successfully applied for the treatment of waters contaminated with aromatic compounds. In these systems, plants provide oxygen and root exudates to the rhizosphere and thereby stimulate microbial degradation processes. Root exudation of oxygen and organic compounds depends on photosynthetic activity and thus may show day-night fluctuations. While diurnal changes in CW effluent composition have been observed, information on respective fluctuations of bacterial activity are scarce. We investigated microbial processes in a CW model system treating toluene-contaminated water which showed diurnal oscillations of oxygen concentrations using metaproteomics. Quantitative real-time PCR was applied to assess diurnal expression patterns of genes involved in aerobic and anaerobic toluene degradation. We observed stable aerobic toluene turnover by Burkholderiales during the day and night. Polyhydroxyalkanoate synthesis was upregulated in these bacteria during the day, suggesting that they additionally feed on organic root exudates while reutilizing the stored carbon compounds during the night via the glyoxylate cycle. Although mRNA copies encoding the anaerobic enzyme benzylsuccinate synthase (bssA) were relatively abundant and increased slightly at night, the corresponding protein could not be detected in the CW model system. Our study provides insights into diurnal patterns of microbial processes occurring in the rhizosphere of an aquatic ecosystem. IMPORTANCE Constructed wetlands are a well-established and cost-efficient option for the bioremediation of contaminated waters. While it is commonly accepted knowledge that the function of CWs is determined by the interplay of plants and microorganisms, the detailed molecular processes are considered a black box. Here, we used a well-characterized CW model system treating toluene-contaminated water to investigate the microbial processes influenced by diurnal plant root exudation. Our results indicated stable aerobic toluene degradation by members of the Burkholderiales during the day and night. Polyhydroxyalkanoate synthesis in these bacteria was higher during the day, suggesting that they additionally fed on organic root exudates and reutilized the stored carbon compounds during the night. Our study illuminates microbial processes occurring in the rhizosphere of an aquatic ecosystem. PMID:27129963

Diurnal water relations of walnut trees - Implications for remote sensing

NASA Technical Reports Server (NTRS)

Weber, James A.; Ustin, Susan L.

1991-01-01

Leaflet water content (WC), relative water content (RWC), and water potential, Phi(lf) were measured as indicators of diurnal change in tree water status in an experimental walnut orchard receiving two irrigation treatments: 100 and 33 percent of potential evapotranspiration (PET). Diurnal change was greatest in Phi(lf) throughout the experimental period, with minima occurring each day in early to mid-afternoon and maxima between midnight and sunrise. Leaflet WC and RWC were lower in the afternoon than at night, but had greater variability so that the diurnal pattern was not as clear. Comparison between the pattern of Phi(lf) and dielectric constants (DCs) measured from probes inserted 2 cm into a tree hole showed that both declined nearly in parallel in the morning. Phi(lf) recovered more rapidly than DC in the afternoon. This temporal discrepancy could be caused by cavitation of xylem elements in the vicinity of the DC probe. Microwave backscatter for L- and X-bands also measured diurnal variation that had local minima in the afternoon, but the pattern among wavelength and polarization signatures was complex.

Chronobiology of chronic pain: focus on diurnal rhythmicity of neuropathic pain.

PubMed

Gilron, Ian; Ghasemlou, Nader

2014-12-01

Although circadian rhythmicity has long been recognized in various nociceptive pain conditions such as arthritis, diurnal pain patterns in neuropathic conditions have only recently been described. The purpose of this article is to review emerging evidence and discuss future research to further understand this phenomenon. Secondary analyses of neuropathic pain clinical trials demonstrate that pain intensity fluctuations exhibit a distinct diurnal pattern that contrasts that of nociceptive pain conditions. Ongoing preclinical investigations support the phenomenon of circadian pain fluctuations and provide the opportunity to better describe pain chronobiology and to elucidate underlying mechanisms of circadian pain rhythmicity. The observation of clinically relevant diurnal pain variability in neuropathic conditions has important implications for future research and treatment of pain. This is an immature research field, and further investigation is needed to better characterize these patterns in more detail, investigate contributory mechanisms, and to develop therapeutic strategies that exploit this phenomenon.

Ups and Downs: Daily Cycles of Adolescent Moods.

ERIC Educational Resources Information Center

Barber, Bonnie L.; Jacobson, Kristen C.; Miller, Kristelle E.; Petersen, Anne C.

1998-01-01

Examined diurnal patterns of adolescents' stress, affect, and arousal. Found that gender, depression risk status, and day of week influenced mean levels of adolescent moods but were not associated with differences in mood patterns throughout the day. Suggested that adolescents' emotional states follow a diurnal cycle stemming from endogenous…

Biophysical modeling of the temporal niche: from first principles to the evolution of activity patterns.

PubMed

Levy, Ofir; Dayan, Tamar; Kronfeld-Schor, Noga; Porter, Warren P

2012-06-01

Most mammals can be characterized as nocturnal or diurnal. However infrequently, species may overcome evolutionary constraints and alter their activity patterns. We modeled the fundamental temporal niche of a diurnal desert rodent, the golden spiny mouse, Acomys russatus. This species can shift into nocturnal activity in the absence of its congener, the common spiny mouse, Acomys cahirinus, suggesting that it was competitively driven into diurnality and that this shift in a small desert rodent may involve physiological costs. Therefore, we compared metabolic costs of diurnal versus nocturnal activity using a biophysical model to evaluate the preferred temporal niche of this species. The model predicted that energy expenditure during foraging is almost always lower during the day except during midday in summer at the less sheltered microhabitat. We also found that a shift in summer to foraging in less sheltered microhabitats in response to predation pressure and food availability involves a significant physiological cost moderated by midday reduction in activity. Thus, adaptation to diurnality may reflect the "ghost of competition past"; climate-driven diurnality is an alternative but less likely hypothesis. While climate is considered to play a major role in the physiology and evolution of mammals, this is the first study to model its potential to affect the evolution of activity patterns of mammals.

Sexual orientation and diurnal cortisol patterns in a cohort of U.S. young adults.

PubMed

Austin, S Bryn; Rosario, Margaret; McLaughlin, Katie A; Roberts, Andrea L; Gordon, Allegra R; Sarda, Vishnudas; Missmer, Stacey; Anatale-Tardiff, Laura; Scherer, Emily A

2016-07-01

Sexual minorities in the United States are at elevated risk of bullying, discrimination, and violence victimization, all stressors that have been linked to psychological and behavioral stress responses including depressive and anxious symptoms and substance use. Acute and chronic stressors may also elicit physiologic stress responses, including changes in the regulation of the hypothalamic-pituitary-adrenocortical (HPA) axis. Few studies, however, have examined the relationship between minority sexual orientation and diurnal cortisol patterns. The present study included 1670 young adults ages 18-32 years (69% female, 31% male) from the Growing Up Today Study, a prospective cohort of U.S. youth. Participants provided five saliva samples over one day to estimate diurnal cortisol patterns. Sexual orientation groups included: completely heterosexual with no same-sex partners (referent), completely heterosexual with same-sex partners/mostly heterosexual, and gay/lesbian/bisexual. Covariates included perceived stress and stressful life events in the past month. Sex-stratified multilevel models of log-transformed cortisol values were used to model diurnal cortisol patterns, and generalized estimating equations were used to model area under the curve (AUC), both with respect to ground (AUCg) and increase (AUCi). Among females, sexual minorities reported significantly more stressful life events in the past month than their heterosexual counterparts. In adjusted multilevel models, sexual orientation was not significantly associated with diurnal cortisol patterns or with AUCg or AUCi in either females or males. There were no significant interactions between sexual orientation and stressful life events. Time-varying negative mood was significantly associated with higher cortisol levels across the day for both female and male participants, after adjusting for all covariates. This study from a large cohort of U.S. young adults did not detect a relationship between sexual orientation and diurnal cortisol patterns. Despite consistent evidence indicating that, compared to heterosexuals, sexual minorities experience elevated exposure to multiple forms of stressors and adversity across the life course, we did not find differences in diurnal cortisol rhythms by sexual orientation. One possible explanation is that sexual minority participants in the study exhibited physiologic resilience. Copyright © 2016 Elsevier Ltd. All rights reserved.

Sexual orientation and diurnal cortisol patterns in a cohort of U.S. young adults

PubMed Central

Austin, S. Bryn; Rosario, Margaret; McLaughlin, Katie A.; Roberts, Andrea L.; Gordon, Allegra R.; Sarda, Vishnudas; Missmer, Stacey; Anatale-Tardiff, Laura; Scherer, Emily A.

2016-01-01

Sexual minorities in the United States are at elevated risk of bullying, discrimination, and violence victimization, all stressors that have been linked to psychological and behavioral stress responses including depressive and anxious symptoms and substance use. Acute and chronic stressors may also elicit physiologic stress responses, including changes in the regulation of the hypothalamic-pituitary-adrenocortical (HPA) axis. Few studies, however, have examined the relationship between minority sexual orientation and diurnal cortisol patterns. The present study included 1670 young adults ages 18–32 years (69% female, 31% male) from the Growing Up Today Study, a prospective cohort of U.S. youth. Participants provided five saliva samples over one day to estimate diurnal cortisol patterns. Sexual orientation groups included: completely heterosexual with no same-sex partners (referent), completely heterosexual with same-sex partners/mostly heterosexual, and gay/lesbian/bisexual. Covariates included perceived stress and stressful life events in the past month. Sex-stratified multilevel models of log-transformed cortisol values were used to model diurnal cortisol patterns, and generalized estimating equations were used to model area under the curve (AUC), both with respect to ground (AUCg) and increase (AUCi). Among females, sexual minorities reported significantly more stressful life events in the past month than their heterosexual counterparts. In adjusted multilevel models, sexual orientation was not significantly associated with diurnal cortisol patterns or with AUCg or AUCi in either females or males. There were no significant interactions between sexual orientation and stressful life events. Time-varying negative mood was significantly associated with higher cortisol levels across the day for both female and male participants, after adjusting for all covariates. This study from a large cohort of U.S. young adults did not detect a relationship between sexual orientation and diurnal cortisol patterns. Despite consistent evidence indicating that, compared to heterosexuals, sexual minorities experience elevated exposure to multiple forms of stressors and adversity across the life course, we did not find differences in diurnal cortisol rhythms by sexual orientation. One possible explanation is that sexual minority participants in the study exhibited physiologic resilience. PMID:27131052

Eye shape and the nocturnal bottleneck of mammals.

PubMed

Hall, Margaret I; Kamilar, Jason M; Kirk, E Christopher

2012-12-22

Most vertebrate groups exhibit eye shapes that vary predictably with activity pattern. Nocturnal vertebrates typically have large corneas relative to eye size as an adaptation for increased visual sensitivity. Conversely, diurnal vertebrates generally demonstrate smaller corneas relative to eye size as an adaptation for increased visual acuity. By contrast, several studies have concluded that many mammals exhibit typical nocturnal eye shapes, regardless of activity pattern. However, a recent study has argued that new statistical methods allow eye shape to accurately predict activity patterns of mammals, including cathemeral species (animals that are equally likely to be awake and active at any time of day or night). Here, we conduct a detailed analysis of eye shape and activity pattern in mammals, using a broad comparative sample of 266 species. We find that the eye shapes of cathemeral mammals completely overlap with nocturnal and diurnal species. Additionally, most diurnal and cathemeral mammals have eye shapes that are most similar to those of nocturnal birds and lizards. The only mammalian clade that diverges from this pattern is anthropoids, which have convergently evolved eye shapes similar to those of diurnal birds and lizards. Our results provide additional evidence for a nocturnal 'bottleneck' in the early evolution of crown mammals.

Eye shape and the nocturnal bottleneck of mammals

PubMed Central

Hall, Margaret I.; Kamilar, Jason M.; Kirk, E. Christopher

2012-01-01

Most vertebrate groups exhibit eye shapes that vary predictably with activity pattern. Nocturnal vertebrates typically have large corneas relative to eye size as an adaptation for increased visual sensitivity. Conversely, diurnal vertebrates generally demonstrate smaller corneas relative to eye size as an adaptation for increased visual acuity. By contrast, several studies have concluded that many mammals exhibit typical nocturnal eye shapes, regardless of activity pattern. However, a recent study has argued that new statistical methods allow eye shape to accurately predict activity patterns of mammals, including cathemeral species (animals that are equally likely to be awake and active at any time of day or night). Here, we conduct a detailed analysis of eye shape and activity pattern in mammals, using a broad comparative sample of 266 species. We find that the eye shapes of cathemeral mammals completely overlap with nocturnal and diurnal species. Additionally, most diurnal and cathemeral mammals have eye shapes that are most similar to those of nocturnal birds and lizards. The only mammalian clade that diverges from this pattern is anthropoids, which have convergently evolved eye shapes similar to those of diurnal birds and lizards. Our results provide additional evidence for a nocturnal ‘bottleneck’ in the early evolution of crown mammals. PMID:23097513

Future Time Perspective, Socio-Emotional Regulation, and Diurnal Cortisol Patterns in Post-Secondary Engineering Students

ERIC Educational Resources Information Center

Cheng, Katherine C.

2017-01-01

Built upon Control Value Theory, this dissertation consists of two studies that examine university students' future-oriented motivation, socio-emotional regulation, and diurnal cortisol patterns in understanding students' well-being in the academic-context. Study 1 examined the roles that Learning-related Hopelessness and Future Time Perspective…

SEASONAL AND DIURNAL ACTIVITY PATTERNS IN ANT (HYMENOPTERA: FORMICIDAE) COMMUNITIES IN A VEGETATION TRANSITION REGION OF SOUTHEASTERN NEW MEXICO

EPA Science Inventory

The densities of active ant colonies were estimated in three habitats: creosotebush shrubland, grassland, and shinnery-oak mesquite dunes. Diurnal foraging patterns were studied at bait boards. Species richness of ant communities in this transitional region (8-12 species) was co...

Diurnal Patterns of Heterotrophic and Autotrophic Soil Respiration in Maize and Switchgrass Bioenergy Cropping Systems

NASA Astrophysics Data System (ADS)

von Haden, A.; Marin-Spiotta, E.; Jackson, R. D.; Kucharik, C. J.

2016-12-01

A high proportion of carbon lost from terrestrial ecosystems occurs via soil CO2 respiration. Soil respiration is comprised of two contrasting sources: heterotrophic respiration (RH) from the decomposition of organic matter and autotrophic respiration (RA) from plant root metabolism. Since the two sources of soil respiration vary widely in their origin, the controls of each source are also likely to differ. However, the challenge of partitioning soil respiration sources in situ has limited our mechanistic understanding of RH and RA. Our objective was to evaluate the in situ diurnal controls of RH and RA in maize (Zea mays L.) and switchgrass (Panicum virgatum L.) bioenergy cropping systems. We hypothesized that both RH and RA would follow diurnal soil temperature trends, but that RA would also respond to diel patterns of photosynthetically active radiation (PAR). We also expected that diurnal soil respiration patterns would vary significantly within the growing season. We evaluated our hypothesis with six diurnal soil respiration campaigns during the 2015 and 2016 growing seasons at Arlington, WI, USA. RH showed clear oscillating diel trends, typically peaking in the mid-afternoon when near-surface soil temperatures were highest. Diurnal RA patterns were more nuanced than RH, but were generally highest in the late afternoon and showed the most pronounced diel trends during peak growing season in July. RA also tended to spike in concert with PAR, but this effect was much more prominent in maize than switchgrass. Continuing efforts will attempt to quantitatively separate the effects of soil temperature and PAR on RA.

Combined Effects of Diurnal and Nonsynchronous Surface Stresses on Europa

NASA Technical Reports Server (NTRS)

Stempel, M. M.; Pappalardo, R. T.; Wahr, J.; Barr, A. C.

2004-01-01

To date, modeling of the surface stresses on Europa has considered tidal, nonsynchronous, and polar wander sources of stress. The results of such models can be used to match lineament orientations with candidate stress patterns. We present a rigorous surface stress model for Europa that will facilitate comparison of principal stresses to lineament orientation, and which will be available in the public domain. Nonsynchronous rotation and diurnal motion contribute to a stress pattern that deforms the surface of Europa. Over the 85-hour orbital period, the diurnal stress pattern acts on the surface, with a maximum magnitude of approximately 0.1 MPa. The nonsynchronous stress pattern sweeps over the surface due to differential rotation of the icy shell relative to the tidally locked interior of the moon. Nonsynchronous stress builds cumulatively with approximately 0.1 MPa per degree of shell rotation.

Spatio-temporal characteristics of the diurnal precipitation cycle over Sweden and the linkage to large-scale circulation

NASA Astrophysics Data System (ADS)

Walther, A.; Jeong, J.-H.; Chen, D.

2009-04-01

Rainfall events exhibit diurnal cycle in both frequency and amount, of which phase and amplitude show substantial geographic and seasonal variation. Although the diurnal cycle of precipitation is one of the fundamental characteristics to determine local weather and climate, most of sophisticated climate models still have great deficiencies in reproducing it. Thus more exact understanding of the diurnal precipitation cycle and its mechanisms is thought to be very important to improve climate models and their prediction results. In this work we investigate the diurnal cycle of precipitation in Sweden using ground based hourly observations for 1996-2008. For the precipitation amount and frequency, mean diurnal cycles are computed, and the peak timing and amplitude of the diurnal and semi-diurnal cycle of precipitation are estimated by the harmonic analysis method. Clear mean diurnal precipitation cycles as well as distinct spatial patterns for all seasons are derived. In summer, showing the most distinct pattern, the majority of the stations show a clear rainfall maximum in the afternoon (12-18 LST) except for the coastal part of Central Sweden where we see an early-morning peak (00-06 LST) and the east coast of southern Sweden where we find a morning peak (06-12 LST). The clear afternoon peak may be due to high insolation accumulated during the day time in summer leading to a local convection activity later on that day. These coastal bands mostly consist of the stations closest to the Baltic Sea. Meso-scale convection connected to temperature differences between sea and land combined with a favorable wind pattern seems to play a role here. In the transition seasons, spring and autumn, the amplitude is weaker and the spatial pattern of peak timing is less distinct than in summer. In spring the westcoast stations have a morning peak and stations in southeastern Sweden show an afternoon peak. In autumn we see a zonal division with a clear afternoon peak in southern Sweden. This might be due to a steeply decreasing energy input from the solar insolation in the northern parts causing less convection activity but still enough insolation to cause an afternoon peak in southern Sweden. In both seasons, spring and autumn, north of 60 degrees the pattern is mixed showing early-morning, morning and afternoon peaks. The winter pattern is characterized by afternoon peaks along the eastcoast and central South Sweden and morning peaks over the most of the other parts of the country. However, the amplitude of the diurnal cycle is much weaker compared to that in summer or autumn. In order to examine the large scale circulation which might modulate the diurnal cycle, the Lamb weather types are computed based on sea level pressure fields from the NCEP/NCAR reanalysis 2 dataset with daily and 6-hourly resolution, respectively. The Lamb types based on 6-hourly SLP underline the high temporal variability of atmospheric conditions over the research area. Throughout all seasons, on about 45% of the days two or more circulation classes are different. In 6.3% (JJA) to 8.4% (DJF) of the days can observe 4 different Lamb classes. Using Lamb types with 6-hourly resolution leads to a somewhat finer classification. On average, for about one third of the days with precipitation the daily Lamb type and the appropriate 6-hourly one are different. The most frequent large-scale circulation classes coupled to precipitation events are of cyclonic or directional type. The atmospheric circulation patterns do not follow a diurnal cycle, whereas the local observed precipitation does. Knowledge about the timing of the rainfall is important in order to assign the right underlying circulation patterns to precipitation events.

The diurnal variation in urine acidification differs between normal individuals and uric acid stone formers

PubMed Central

Cameron, Mary Ann; Maalouf, Naim M.; Poindexter, John; Adams-Huet, Beverley; Sakhaee, Khashayar; Moe, Orson W.

2012-01-01

Many biologic functions follow circadian rhythms driven by internal and external cues that synchronize and coordinate organ physiology to diurnal changes in the environment and behavior. Urinary acid-base parameters follow diurnal patterns and it is thought these changes are due to periodic surges in gastric acid secretion. Abnormal urine pH is a risk factor for specific types of nephrolithiasis and uric acid stones are typical of excessively low urine pH. Here we placed 9 healthy volunteers and 10 uric acid stone formers on fixed metabolic diets to study the diurnal pattern of urinary acidification. All showed clear diurnal trends in urinary acidification but none of the patterns were affected by inhibitors of the gastric proton pump. Uric acid stone formers had similar patterns of change through the day but their urine pH was always lower compared to healthy volunteers. Uric acid stone formers excreted more acid (normalized to acid ingestion) with the excess excreted primarily as titratable acid rather than ammonium. Urine base excretion was also lower in uric acid stone formers (normalized to base ingestion) along with lower plasma bicarbonate concentrations during part of the day. Thus, increased net acid presentation to the kidney and the preferential use of buffers, other than ammonium, result in much higher concentrations of un-dissociated uric acid throughout the day and consequently an increased risk of uric acid stones. PMID:22297671

Diurnal patterns of chlorophyll fluorescence and CO2 fixation in orchard grown Torreya taxifolia (Arn.).

Treesearch

Anita C. Koehn; Robert L. Doudrick

1999-01-01

Diurnal patterns of chlorophyll fluorescence and CO2 fixation in orchard measurements were taken on sunny days in October 1996, on three Torreya taxifolia (Arn.) plants grown in an open canopy orchard. Information from chlorophyll fluorescence quenching analysis indicated that during periods of highest light intensity and temperatures there were...

Diurnal variations in maize and soybean vegetation indices from continuous measurements of ground-based spectral reflectance

NASA Astrophysics Data System (ADS)

Arkebauer, T. J.; Walter-Shea, E. A.

2017-12-01

Vegetation indices, based on canopy spectral reflectance, are widely used to infer physical and biological characteristics of vegetation. Understanding the changes in remotely sensed signals as vegetation responds to its changing environment is essential for full assessment of canopy structure and function. Canopy-level reflectance has been measured at Nebraska AmeriFlux sites US-Ne1, US-Ne2 and US-Ne3 for most years since flux measurements were initiated in 2001. Tower-mounted spectral sensors provided 10-minute averaged reflectance (in PAR and NIR spectral regions) every half hour through the growing season for maize and soybean. Canopy reflectance varied over diurnal and seasonal time periods which led to variations in vegetation indices. One source of variation is due to the interaction of incident solar radiant energy with canopy structure (e.g., reflectance varies with changes in solar zenith angle and direct beam fraction, vegetative fraction, and leaf angle distribution). Another source of variation results from changes in canopy function (e.g., fluctuations in gross primary production and invocation of photoprotective mechanisms with plant stress). We present here a series of diurnal "patterns" of vegetation indices (including Normalized Difference Vegetation Index and Chlorophyll Index) for maize and soybean under mostly clear sky conditions. We demonstrate that diurnal patterns change as the LAI of the canopy changes through the course of the growing season in a somewhat predictable pattern from plant emergence (low vegetative cover) through peak green LAI (full vegetation cover). However, there are changes in the diurnal pattern that we have yet to fully understand; this variation in pattern may indicate variation in canopy function. Initially, we have explored the pattern changes qualitatively and are currently developing more quantitative approaches.

Diurnal variation of methane emissions from an alpine wetland on the eastern edge of Qinghai-Tibetan Plateau.

PubMed

Chen, Huai; Wu, Ning; Yao, Shouping; Gao, Yongheng; Wang, Yanfen; Tian, Jianqing; Yuan, Xingzhong

2010-05-01

Alpine wetland is a source for CH(4), but little is known about methane emission from such wetland, especially about its diurnal pattern. In this study we tried to probe the diurnal variation in methane emission from alpine wetland vegetation. The average methane emission rate was 9.6 +/- 3.4 mg CH(4) m(-2) h(-1). There was an apparent diurnal variation pattern in methane emission with one minor peak at 06:00 and a major one at 15:00. The sunrise peak was consistent with a two-way transport mechanism for plants (convective at daytime and diffusive at night-time). CH(4) emission was found significantly correlated with redox potentials. The afternoon peak could not be explained by diurnal variation in soil temperature, but could be attributable to changes in CH(4) oxidation and production driven by plant gas transport mechanism. The results have important implications for sampling and scaling strategies for estimating methane emission from alpine wetlands.

Tissue Specific Diurnal Rhythms of Metabolites and Their Regulation during Herbivore Attack in a Native Tobacco, Nicotiana attenuata

PubMed Central

Kim, Sang-Gyu; Gulati, Jyotasana; Baldwin, Ian T.

2011-01-01

Ecological performance is all about timing and the endogenous clock that allows the entrainment of rhythms and anticipation of fitness-determining events is being rapidly characterized. How plants anticipate daily abiotic stresses, such as cold in early mornings and drought at noon, as well as biotic stresses, such as the timing of pathogen infections, is being explored, but little is known about the clock's role in regulating responses to insect herbivores and mutualists, whose behaviors are known to be strongly diurnally regulated and whose attack is known to reconfigure plant metabolomes. We developed a liquid chromatography-mass spectrometry procedure and analyzed its output with model-based peak picking algorithms to identify metabolites with diurnal accumulation patterns in sink/source leaves and roots in an unbiased manner. The response of metabolites with strong diurnal patterns to simulated attack from the specialist herbivore, Manduca sexta larvae was analyzed and annotated with in-house and public databases. Roots and leaves had largely different rhythms and only 10 ions of 182 oscillating ions in leaves and 179 oscillating ions in roots were rhythmic in both tissues: root metabolites mainly peaked at dusk or night, while leaf metabolites peaked during the day. Many oscillating metabolites showed tissue-specific regulation by simulated herbivory of which systemic responses in unattacked tissues were particularly pronounced. Diurnal and herbivory-elicited accumulation patterns of disaccharide, phenylalanine, tyrosine, lyciumoside I, coumaroyl tyramine, 12-oxophytodienoic acid and jasmonic acid and those of their related biosynthetic transcripts were examined in detail. We conclude that oscillating metabolites of N. attenuata accumulate in a highly tissue-specific manner and the patterns reveal pronounced diurnal rhythms in the generalized and specialized metabolism that mediates the plant's responses to herbivores and mutualists. We propose that diurnal regulation will prove to an important element in orchestrating a plant's responses to herbivore attack. PMID:22028833

Featured Article: Community Crime Exposure and Risk for Obesity in Preschool Children: Moderation by the Hypothalamic-Pituitary-Adrenal-Axis Response.

PubMed

Gartstein, Maria A; Seamon, Erich; Thompson, Stephanie F; Lengua, Liliana J

2018-05-01

Identification of early risk factors related to obesity is critical to preventative public health efforts. In this study, we investigated links between the Hypothalamic-Pituitary-Adrenal (HPA)-axis activity (diurnal cortisol pattern), geospatially operationalized exposure to neighborhood crime, and body mass index (BMI) for a sample of 5-year-old children. Greater community crime exposure and lower HPA-axis activity were hypothesized to contribute to higher BMI, with child HPA-axis moderating the association between crime exposure and BMI. Families residing within the boundaries of the City of Seattle (N = 114) provided information concerning demographic/psychosocial risk factors, used to calculate a Cumulative Risk Index, indicating the number of contextual adversities present. Child BMI and diurnal cortisol pattern (derived from assays of saliva samples) were examined, along with neighborhood crime indices computed with publically available information, based on participants' locations. Hierarchical multiple regression analyses, adjusted for covariates (cumulative risk, age, and sex), indicated that crime proximity made a unique contribution to child BMI, in the direction signaling an increase in the risk for obesity. Consistent with our hypothesis, a significant interaction was observed, indicative of moderation by diurnal cortisol pattern. Follow-up simple slope analyses demonstrated that crime exposure was significantly related to higher BMI for children with low-flat (blunted) diurnal cortisol patterns, where community crime and BMI were not significantly associated at higher levels of cortisol. Community crime exposure contributes to higher BMI as early as the preschool period, and blunted diurnal cortisol patterns may place children experiencing neighborhood adversity at greater risk for obesity.

Brain Oscillations and Diurnal Variations in Hypnotic Responsiveness—A Commentary on “Diurnal Variations in Hypnotic Responsiveness: Is There an Optimal Time to be Hypnotized?”

PubMed Central

Jensen, Mark P.

2016-01-01

A recent study published in the International Journal of Clinical and Experimental Hypnosis reported an interesting diurnal pattern of hypnotic responsivity; specifically, the authors found higher hypnotic responsiveness in a large sample of undergraduates in the morning and early evening. However, they did not have an explanation for this pattern of findings. This pattern is consistent, however, with the theta hypothesis of hypnotic responsivity. Further examination of the associations between brain oscillations and response to hypnosis is needed to determine if specific oscillations such as theta (1) actually facilitate response to some hypnotic suggestions, (2) merely reflect hypnotic responding, or (3) reflect another factor that itself plays a causal role in response to hypnosis. PMID:26599996

Diurnal changes in epidermal UV transmittance of plants in naturally high UV environments.

PubMed

Barnes, Paul W; Flint, Stephan D; Slusser, James R; Gao, Wei; Ryel, Ronald J

2008-06-01

Studies were conducted on three herbaceous plant species growing in naturally high solar UV environments in the subalpine of Mauna Kea, Hawaii, USA, to determine if diurnal changes in epidermal UV transmittance (T(UV)) occur in these species, and to test whether manipulation of the solar radiation regime could alter these diurnal patterns. Additional field studies were conducted at Logan, Utah, USA, to determine if solar UV was causing diurnal T(UV) changes and to evaluate the relationship between diurnal changes in T(UV) and UV-absorbing pigments. Under clear skies, T(UV), as measured with a UV-A-pulse amplitude modulation fluorometer for leaves of Verbascum thapsus and Oenothera stricta growing in native soils and Vicia faba growing in pots, was highest at predawn and sunset and lowest at midday. These patterns in T(UV) closely tracked diurnal changes in solar radiation and were the result of correlated changes in fluorescence induced by UV-A and blue radiation but not photochemical efficiency (F(v)/F(m)) or initial fluorescence yield (F(o)). The magnitude of the midday reduction in T(UV) was greater for young leaves than for older leaves of Verbascum. Imposition of artificial shade eliminated the diurnal changes in T(UV) in Verbascum, but reduction in solar UV had no effect on diurnal T(UV) changes in Vicia. In Vicia, the diurnal changes in T(UV) occurred without detectable changes in the concentration of whole-leaf UV-absorbing compounds. Results suggest that plants actively control diurnal changes in UV shielding, and these changes occur in response to signals other than solar UV; however, the underlying mechanisms responsible for rapid changes in T(UV) remain unclear.

Characterizing CH4, CO2 and N2O emission from barn feeding Tibetan sheep in Tibetan alpine pastoral area in cold season

NASA Astrophysics Data System (ADS)

Xu, Tianwei; Zhao, Na; Hu, Linyong; Xu, Shixiao; Liu, Hongjin; Ma, Li; Zhao, Xinquan

2017-05-01

Herein, methane (CH4), carbon dioxide (CO2) and nitrous oxide (N2O) emission from different aged barn feeding Tibetan sheep were characterized using a respiration chamber in combination with gas chromatograph method in cold season of 2013. This work was based on measuring the increase of gas concentration inside respiration chamber by the means of gas chromatograph. Results indicated that diurnal CH4 emission patterns for barn feeding Tibetan sheep were driven by feeding schedule, diurnal CO2 emission patterns were relatively stable with two slight emission peaks, diurnal N2O emission patterns were driven by the variation of temperature inside chamber. Diurnal CH4 emission rates were 17.65, 19.49 and 21.06 g sheep-1 d-1 for yearling, two-year and three-year barn feeding Tibetan sheep, account for 6.15%, 5.76% and 5.45% of their daily gross energy intakes, respectively. Diurnal CO2 emission rates were 526.88, 588.43 and 640.66 g sheep-1 d-1 for yearling, two-year and three-year barn feeding Tibetan sheep, respectively. Diurnal N2O emission rates were 1.64, 1.25 and 1.05 mg sheep-1 d-1 for yearling, two-year and three-year barn feeding Tibetan sheep, respectively. Three-year barn feeding Tibetan sheep released more CO2-eq on per unit BW and BW0.75 gain basis.

Diurnal centroid of ecosystem energy and carbon fluxes at FLUXNET sites

Treesearch

Kell B. Wilson; Dennis Baldocchi; Eva Falge; Marc Aubinet; Paul Berbigier; Christian Bernhofer; Han Dolman; Chris Field; Allen Goldstein; Andre Granier; Dave Hollinger; Gabriel Katul; B.E. Law; Tilden Meyers; John Moncrieff; Russ Monson; John Tenhunen; Riccardo Valentini; Shashi Verma; Steve Wofsy

2003-01-01

Data from a network of eddy covariance stations in Europe and North America (FLUXNET) were analyzed to examine the diurnal patterns of surface energy and carbon fluxes during the summer period across a range of ecosystems and climates. Diurnal trends were quantified by assessing the time of day surface fluxes and meteorological variable reached peak values, using the...

Diurnal and seasonal change in stem respiration of Larix principis-rupprechtii trees, northern China.

PubMed

Yang, Yan; Zhao, Miao; Xu, Xiangtao; Sun, Zhenzhong; Yin, Guodong; Piao, Shilong

2014-01-01

Stem respiration is a critical and uncertain component of ecosystem carbon cycle. Few studies reported diurnal change in stem respiration as well as its linkage with climate. In this study, we investigated the diurnal and seasonal change in stem respiration and its linkage with environmental factors, in larch plantations of northern China from 2010 to 2012. The stem respiration per unit surface area (RS) showed clear diurnal cycles, ranging from 1.65±0.10 to 2.69±0.15 µmol m(-2) s(-1), increased after 6∶00, peaked at 15∶00 and then decreased. Both stem temperature and air temperature show similar diurnal pattern, while the diurnal pattern of air relative humidity is just the opposite to Rs. Similar to the diurnal cycles, seasonal change in RS followed the pattern of stem temperature. RS increased from May (1.28±0.07 µmol m(-2) s(-1)) when the stem temperature was relatively low and peaked in July (3.02±0.10 µmol m(-2) s(-1)) when the stem temperature was also the highest. Further regression analyses show that RS exponentially increases with increasing temperature, and the Q10 of Rs at mid daytime (1.97±0.17 at 12∶00 and 1.96±0.10 at 15∶00) is significantly lower than that of mid nighttime (2.60±0.14 at 00∶00 and 2.71±0.25 at 03∶00) Q10. This result not only implies that Rs is more sensitive to night than day warming, but also highlights that temperature responses of Rs estimated by only daytime measurement can lead to underestimated stem respiration increase under global warming, especially considering that temperature increase is faster during nighttime.

Radiation: microbial evolution, ecology, and relevance to mars missions.

PubMed

Rothschild, L J; Cockell, C S

1999-12-06

Ultraviolet (UV) radiation has been an important environmental parameter during the evolution of life on Earth, both in its role as a mutagen and as a selective agent. This was probably especially true during the time from 3.8 to 2.5 billion years ago, when atmospheric ozone levels were less than 1% of present levels. Early Mars may not have had an "ozone shield" either, and it never developed a significant one. Even though Mars is farther away from the Sun than the Earth, a substantial surficial UV flux is present on Mars today. But organisms respond to dose rate, and on Mars, like on Earth, organisms would be exposed to diurnal variations in UV flux. Here we present data on the effect of diurnal patterns of UV flux on microbial ecosystems in nature, with an emphasis on photosynthesis and DNA synthesis effects. These results indicate that diurnal patterns of metabolism occur in nature with a dip in photosynthesis and DNA synthesis in the afternoon, in part regulated by UV flux. Thus, diurnal patterns must be studied in order to understand the effect of UV radiation in nature. The results of this work are significant to the success of human missions to Mars for several reasons. For example, human missions must include photosynthetic organisms for food production and likely oxygen production. An evolutionary approach suggests which organisms might be best suited for high UV fluxes. The diurnal aspect of these studies is critical. Terraforming is a potential goal of Mars exploration, and it will require studies of the effect of Martian UV fluxes, including their diurnal changes, on terrestrial organisms. Such studies may suggest that diurnal changes in UV only require mitigation at some times of day or year.

Radiation: microbial evolution, ecology, and relevance to mars missions

NASA Technical Reports Server (NTRS)

Rothschild, L. J.; Cockell, C. S.

1999-01-01

Ultraviolet (UV) radiation has been an important environmental parameter during the evolution of life on Earth, both in its role as a mutagen and as a selective agent. This was probably especially true during the time from 3.8 to 2.5 billion years ago, when atmospheric ozone levels were less than 1% of present levels. Early Mars may not have had an "ozone shield" either, and it never developed a significant one. Even though Mars is farther away from the Sun than the Earth, a substantial surficial UV flux is present on Mars today. But organisms respond to dose rate, and on Mars, like on Earth, organisms would be exposed to diurnal variations in UV flux. Here we present data on the effect of diurnal patterns of UV flux on microbial ecosystems in nature, with an emphasis on photosynthesis and DNA synthesis effects. These results indicate that diurnal patterns of metabolism occur in nature with a dip in photosynthesis and DNA synthesis in the afternoon, in part regulated by UV flux. Thus, diurnal patterns must be studied in order to understand the effect of UV radiation in nature. The results of this work are significant to the success of human missions to Mars for several reasons. For example, human missions must include photosynthetic organisms for food production and likely oxygen production. An evolutionary approach suggests which organisms might be best suited for high UV fluxes. The diurnal aspect of these studies is critical. Terraforming is a potential goal of Mars exploration, and it will require studies of the effect of Martian UV fluxes, including their diurnal changes, on terrestrial organisms. Such studies may suggest that diurnal changes in UV only require mitigation at some times of day or year.

Variability of Surface pollutants and aerosol concentration over Abu Dhabi, UAE - sources, transport and current levels

NASA Astrophysics Data System (ADS)

Phanikumar, Devulapalli V.; Basha, Ghouse; Ouarda, Taha B. M. J.

2015-04-01

In the view of recent economic, industrial, and rapid development, Abu Dhabi (24.4oN; 54.4oE; 27m msl) has become one of the most populated regions in the world despite of extreme heat, frequent dust storms, and with distinctive topography. The major sources of air pollution are from the dust and sand storms, greenhouse gas emissions, and to some extent from industrial pollution. In order to realize the accurate and comprehensive understanding of air quality and plausible sources over this region, we have made a detailed analysis of three years simultaneous measurements during 2011-13 of pollutants such as O3, SO2, NO2, CO, and PM10 concentrations. Diurnal variation of meteorological parameters such as temperature and wind speed/relative humidity clearly shows daytime maximum/minimum in summer followed by pre-monsoon, post-monsoon and winter. The prevailing winds over this region are mostly from northwesterly direction (Shamal wind). Diurnal wind pattern showed a clear contrast with the majority of the wind pattern during nighttime and early morning is from the westerly/northwesterly and daytime is from southwesterly/southeasterly directions. The diurnal pattern of O3 shows minimum during 08 LT and increases thereafter reaching maximum at 17 LT and decreases during nighttime. However, the diurnal pattern of SO2 and NO2 show a peak at ~ 08 LT and dip at ~ 14 LT during all the seasons with some variability in each season. On the other hand, the diurnal pattern of CO shows a peculiar picture of elevated levels during daytime peaking at ~ 10 LT (prominent in summer and post-monsoon) followed by a sharp decrease and minimum is ~14 LT. PM10 concentration has an early morning peak at ~ 02 LT and then decreases to a minimum value at ~11 LT and again increases in the afternoon hours (maximum at ~17 LT) depicting a forenoon-afternoon asymmetry. Monthly variation of PM10 shows maximum in pre-monsoon season and minimum in winter. Our observations show the diurnal pattern of pollutants are in contrast with the diurnal pattern of wind speed as evident from the previous observations. Wind rose diagram of pollutants reveal that the dominant source directions are scattered from northwesterly to southwesterly. Our results (2011-13) are compared with earlier observations from the same region (2007-08) and no alarming differences were observed in the pollutant levels. Our observations are discussed in the light of current understanding of pollutants sources over this region.

Thermal Tides in the Martian Middle Atmosphere as Seen by the Mars Climate Sounder

PubMed Central

Lee, C.; Lawson, W. G.; Richardson, M. I.; Heavens, N. G.; Kleinböhl, A.; Banfield, D.; McCleese, D. J.; Zurek, R.; Kass, D.; Schofield, J. T.; Leovy, C. B.; Taylor, F. W.; Toigo, A. D.

2016-01-01

The first systematic observations of the middle atmosphere of Mars (35km–80km) with the Mars Climate Sounder (MCS) show dramatic patterns of diurnal thermal variation, evident in retrievals of temperature and water ice opacity. At the time of writing, the dataset of MCS limb retrievals is sufficient for spectral analysis within a limited range of latitudes and seasons. This analysis shows that these thermal variations are almost exclusively associated with a diurnal thermal tide. Using a Martian General Circulation Model to extend our analysis we show that the diurnal thermal tide dominates these patterns for all latitudes and all seasons. PMID:27630378

Ramadan fasting in Saudi Arabia is associated with altered expression of CLOCK, DUSP and IL-1alpha genes, as well as changes in cardiometabolic risk factors.

PubMed

Ajabnoor, Ghada M A; Bahijri, Suhad; Shaik, Noor Ahmad; Borai, Anwar; Alamoudi, Aliaa A; Al-Aama, Jumana Y; Chrousos, George P

2017-01-01

During the fasting month of Ramadan, practicing Saudis develop severe disturbances in sleeping and feeding patterns. Concomitantly, cortisol circadian rhythm is abolished, diurnal cortisol levels are elevated and circulating levels of several adipokines are altered favouring insulin resistance. To examine changes in the expression of CLOCK and glucocorticoid-controlled genes, such as DUSP1 and IL-1α in Saudi adults before and during Ramadan, and to investigate possible associations with selected cardiometabolic risk factors. Healthy young volunteers (5 females, 18 males; mean age +SEM = 23.2 +1.2 years) were evaluated before Ramadan and two weeks into it. Blood samples were collected at 9 am (±1 hour) and twelve hours later for determination of serum lipid profile, high sensitivity CRP (hsCRP), and adiponectin. The expression of CLOCK, DUSP1 and IL-1α was evaluated in circulating leukocytes. Mean levels of GGT and morning adiponectin decreased, while those of LDL-c/ HDL-c and atherogenic index (AI) increased significantly in Ramadan compared to Shabaan. There was no significant difference between morning and evening adiponectin during Ramadan, while the diurnal rhythm of hsCRP was lost. CLOCK gene expression mean was significantly higher in morning than in evening during Shabaan. Mean morning and evening DUSP1 mRNA levels showed significant increase during Ramadan compared to Shabaan, however, its diurnal rhythm was maintained. Morning IL-1α mRNA expression remained significantly higher than in the evening during Ramadan, but was markedly decreased compared to Shabaan. Ramadan fasting in Saudi Arabia is associated with improvements in some cardiometabolic risk factors, such as circulating GGT and hsCRP and leukocyte expression of IL-1α mRNA, suggesting that intermittent fasting might have a beneficial component. These benefits may be offset by the previously reported dysregulation in the circadian rhythm, excess glucocorticoid levels and action, and insulin resistance, explaining increased prevalence of cardiometabolic disorders and type 2 diabetes mellitus.

Mother-child adrenocortical synchrony; Moderation by dyadic relational behavior.

PubMed

Pratt, Maayan; Apter-Levi, Yael; Vakart, Adam; Kanat-Maymon, Yaniv; Zagoory-Sharon, Orna; Feldman, Ruth

2017-03-01

Mother-child adrenocortical synchrony, the coupling of cortisol (CT) secretion in mother and child, has been associated with shared parent-child experiences and maladaptive familial contexts. Yet, few studies tested adrenocortical synchrony in diurnal CT patterns. Guided by the bio-behavioral synchrony model, we examined whether mother-child relational behavior and maternal psychopathology may moderate the degree of concordance between mother and child's diurnal CT. Ninety-seven mothers and their six-year old children participated in two groups; mothers diagnosed with major depression disorder (N=28) and non-depressed controls (N=69). Mother-child interactions were observed and coded for dyadic reciprocity and dyadic tension and diurnal cortisol was collected from mother and child over two consecutive weekend days. Concordance between maternal and child's diurnal CT was found, significant above and beyond time of measurement. Maternal depression, while associated with attenuated child diurnal CT variability, was unrelated to adrenocortical synchrony. Higher child diurnal CT production predicted a stronger linkage between maternal and child's diurnal CT, suggesting that greater child physiological stress is associated with increased susceptibility to the influences of maternal stress physiology. Mother-child reciprocity was related to lower adrenocortical synchrony. Findings suggest that higher adrenocortical synchrony is associated with greater physiological stress and less adaptive dyadic relational patterns. Results raise the possibility that diurnal adrenocortical synchrony taps a unique aspect of HPA-axis functioning whose role in the cross-generational transfer of stress physiology requires further research. Copyright © 2017 Elsevier Inc. All rights reserved.

Does the diurnal pattern of enteric methane emissions from dairy cows change over time?

PubMed

Bell, M J; Craigon, J; Saunders, N; Goodman, J R; Garnsworthy, P C

2018-02-22

Diet manipulation and genetic selection are two important mitigation strategies for reducing enteric methane (CH4) emissions from ruminant livestock. The aim of this study was to assess whether the diurnal pattern of CH4 emissions from individual dairy cows changes over time when cows are fed on diets varying in forage composition. Emissions of CH4 from 36 cows were measured during milking in an automatic (robotic) milking station in three consecutive feeding periods, for a total of 84 days. In Periods 1 and 2, the 36 cows were fed a high-forage partial mixed ration (PMR) containing 75% forage, with either a high grass silage or high maize silage content. In Period 3, cows were fed a commercial PMR containing 69% forage. Cows were offered PMR ad libitum plus concentrates during milking and CH4 emitted by individual cows was sampled during 8662 milkings. A linear mixed model was used to assess differences among cows, feeding periods and time of day. Considerable variation was observed among cows in daily mean and diurnal patterns of CH4 emissions. On average, cows produced less CH4 when fed on the commercial PMR in feeding Period 3 than when the same cows were fed on high-forage diets in feeding Periods 1 and 2. The average diurnal pattern for CH4 emissions did not significantly change between feeding periods and as lactation progressed. Emissions of CH4 were positively associated with dry matter (DM) intake and forage DM intake. It is concluded that if the management of feed allocation remains constant then the diurnal pattern of CH4 emissions from dairy cows will not necessarily alter over time. A change in diet composition may bring about an increase or decrease in absolute emissions over a 24-h period without significantly changing the diurnal pattern unless management of feed allocation changes. These findings are important for CH4 monitoring techniques that involve taking measurements over short periods within a day rather than complete 24-h observations.

Reciprocal Relations Between Objectively Measured Sleep Patterns and Diurnal Cortisol Rhythms in Late Adolescents

PubMed Central

Zeiders, Katharine H.; Doane Sampey, Leah D.; Adam, Emma K.

2011-01-01

Purpose To examine how hours of sleep and wake times relate to between-person differences and day-to-day changes in diurnal cortisol rhythms in late adolescents Methods Older adolescents (N = 119) provided six cortisol samples (wakeup, +30min, + 2 hours, +8 hours, + 12 hours, and bedtime) on each of three consecutive days while wearing an actigraph. We examined how average (across 3 days) and day-to-day changes in hours of sleep and wake times related to diurnal cortisol patterns. Results On average, greater hours of sleep related steeper decline in cortisol across the days. Day-to-day analyses revealed that prior night’s hours of sleep predicted steeper diurnal slopes the next day, while greater waking cortisol levels and steeper slopes predicted greater hours of sleep and a later wake time the next day. Conclusions Our results suggest a bidirectional relationship between sleep and HPA axis activity. PMID:21575815

Salivary alpha-amylase during pregnancy: diurnal course and associations with obstetric history, maternal demographics, and mood.

PubMed

Giesbrecht, Gerald F; Granger, Douglas A; Campbell, Tavis; Kaplan, Bonnie

2013-03-01

Diurnal patterns of salivary alpha amylase (sAA) in pregnant women have not previously been described. The current study employed ecological momentary assessment to examine the association between the diurnal sAA, obstetric history, maternal demographics, and mood during pregnancy. Saliva was self-collected by 83 pregnant women (89% White, age 25.3-43.0 years; mean gestational age 21.9 weeks, range 6-37 weeks; gravida 1-6) at home over three days. Results indicated that current pregnancy (gestational age and fetal sex) and maternal demographics were not related to diurnal sAA. In contrast, a history of previous miscarriage (Parameter = -.17; SE = .05; p < .05) was associated with an atypical diurnal pattern. Even after accounting for obstetric history, trait anxiety (Parameter = .16; SE = .04; p < .001) was associated with increased sAA over the day while chronic levels of fatigue (Parameter = -.06; SE = .03; p < .05) were associated with decreased sAA. In a separate model, we also tested the time varying covariation of sAA and mood. The effects of momentary mood were in contrast to those for trait mood. Both momentary depression (Parameter = .22; SE = .09; p < .01) and vigour/positive mood (Parameter = .12; SE = .04; p < .001) were associated with momentary increases in sAA while momentary anxiety and fatigue were not related to sAA. The findings suggest that basal sAA during pregnancy is sensitive to emotional arousal. Evaluating diurnal patterns of sAA holds promise for advancing understanding of how emotional arousal during pregnancy may affect fetal development. Copyright © 2012 Wiley Periodicals, Inc.

PubMed

Remmert, Hermann

1969-08-01

Synchrony of diurnal activity patterns seems to have evolved entirely between groups of species. No well established case of synchrony is known which involves only two species. The interdependence of activity patterns based on diurnal rhythms is a phenomenon well known in autecology, e.g. between flowers and their pollinators, parasites and their hosts, predators and their prey.At different daytimes there are completely different food chains in one and the same biotope.The few existing quantitative investigations reveal that 1. strong selective pressure can limit the diurnal activity of a species; 2. the productivity in a biotope may reach a maximum when the daily feeding time of its predators is restricted. This seems to hold, e.g., for the marine plancton.

Differential arousal regulation by prokineticin 2 signaling in the nocturnal mouse and the diurnal monkey.

PubMed

Zhou, Qun-Yong; Burton, Katherine J; Neal, Matthew L; Qiao, Yu; Kanthasamy, Anumantha G; Sun, Yanjun; Xu, Xiangmin; Ma, Yuanye; Li, Xiaohan

2016-08-18

The temporal organization of activity/rest or sleep/wake rhythms for mammals is regulated by the interaction of light/dark cycle and circadian clocks. The neural and molecular mechanisms that confine the active phase to either day or night period for the diurnal and the nocturnal mammals are unclear. Here we report that prokineticin 2, previously shown as a circadian clock output molecule, is expressed in the intrinsically photosensitive retinal ganglion cells, and the expression of prokineticin 2 in the intrinsically photosensitive retinal ganglion cells is oscillatory in a clock-dependent manner. We further show that the prokineticin 2 signaling is required for the activity and arousal suppression by light in the mouse. Between the nocturnal mouse and the diurnal monkey, a signaling receptor for prokineticin 2 is differentially expressed in the retinorecipient suprachiasmatic nucleus and the superior colliculus, brain projection targets of the intrinsically photosensitive retinal ganglion cells. Blockade with a selective antagonist reveals the respectively inhibitory and stimulatory effect of prokineticin 2 signaling on the arousal levels for the nocturnal mouse and the diurnal monkey. Thus, the mammalian diurnality or nocturnality is likely determined by the differential signaling of prokineticin 2 from the intrinsically photosensitive retinal ganglion cells onto their retinorecipient brain targets.

Changing patterns of daily rhythmicity across reproductive states in diurnal female Nile grass rats (Arvicanthis niloticus)

PubMed Central

Schradera, Jessica A.; Walaszczykb, Erin J.; Smalea, Laura

2009-01-01

SCHRADER, J.A., E. J. WALASZCZYK, AND L. SMALE. Changing patterns of daily rhythmicity across reproductive states in diurnal female Nile grass rats (Arvicanthis niloticus). PHYSIOL BEHAV XX(X) XXX-XXX, XXXX. -- A suite of changes in circadian rhythms have been described in nocturnal rodents as females go through pregnancy and lactation, but there is no information on such patterns in diurnal species. As the challenges faced by these two groups of animals are somewhat different, we characterized changes in activity and core body temperature (Tb) in female diurnal Nile grass rats (Arvicanthis niloticus) as they went through a series of reproductive states: virgin, pregnant, pregnant and lactating, lactating only, and post-weaning. The phase of neither rhythm varied, but the amplitude did. Females increased their overall levels of daily activity from early to late pregnancy, regardless of whether they were also lactating. The pattern of activity was less rhythmic during early than mid-lactation, in both non-pregnant and pregnant females, as a consequence of a decrease in daytime relative to nighttime activity. The Tb rhythm amplitude dropped from mid-pregnancy through mid-lactation, and there were rises in Tb troughs during the mid-light and mid-dark phases of the day, though pregnancy and lactation affected Tb at these times in somewhat different ways. This study demonstrates that rhythms in diurnal grass rats change during pregnancy and lactation in different ways than those of nocturnal species that have been studied to date and that the effects of pregnancy and lactation are not additive in any simple way. PMID:19744504

Religious Participation Predicts Diurnal Cortisol Profiles 10 Years Later via Lower Levels of Religious Struggle

PubMed Central

Tobin, Erin T.; Slatcher, Richard B.

2016-01-01

Objective Multiple aspects of religion have been linked with a variety of physical health outcomes; however, rarely have investigators attempted to empirically test the mechanisms through which religiosity impacts health. The links between religious participation, religious coping, and diurnal cortisol patterns over a 10-year period in a national sample of adults in the United States were investigated. Method Participants included 1,470 respondents from the Midlife in the United States (MIDUS) study who provided reports on religious participation, religious coping, and diurnal cortisol. Results Religious participation predicted steeper (“healthier”) cortisol slopes at the 10-year follow-up, controlling for potential confounds. Further, religious struggle (religious coping marked by tension and strain about religious and spiritual issues) mediated the prospective association between religious participation and cortisol slope, such that greater religious attendance predicted lower levels of religious struggle 10 years later, which in turn was linked with a steeper cortisol slope; this effect remained strong when controlling for general emotional coping and social support. Positive religious coping was unrelated to diurnal cortisol patterns. Conclusion These findings identify religious struggle as a mechanism through which religious participation impacts diurnal cortisol levels and suggest that diurnal cortisol is a plausible pathway through which aspects of religion influence long-term physical health. PMID:27280366

Mechanisms for Diurnal Variability of Global Tropical Rainfall Observed from TRMM

NASA Technical Reports Server (NTRS)

Yang, Song; Smith, Eric A.

2004-01-01

The behavior and various controls of diurnal variability in tropical-subtropical rainfall are investigated using Tropical Rainfall Measuring Mission (TRMM) precipitation measurements retrieved from: (1) TRMM Microwave Imager (TMI), (2) Precipitation Radar (PR), and (3) TMI/PR Combined, standard level 2 algorithms for the 1998 annual cycle. Results show that the diurnal variability characteristics of precipitation are consistent for all three algorithms, providing assurance that TRMM retrievals are providing consistent estimates of rainfall variability. As anticipated, most ocean areas exhibit more rainfall at night, while over most land areas rainfall peaks during daytime ,however, various important exceptions are found. The dominant feature of the oceanic diurnal cycle is a rainfall maximum in late-evening/early-morning (LE-EM) hours, while over land the dominant maximum occurs in the mid- to late-afternoon (MLA). In conjunction with these maxima are pronounced seasonal variations of the diurnal amplitudes. Amplitude analysis shows that the diurnal pattern and its seasonal evolution are closely related to the rainfall accumulation pattern and its seasonal evolution. In addition, the horizontal distribution of diurnal variability indicates that for oceanic rainfall there is a secondary MLA maximum, co-existing with the LE-EM maximum, at latitudes dominated by large scale convergence and deep convection. Analogously, there is a preponderance for an LE-EM maximum over land, co-existing with the stronger MLA maximum, although it is not evident that this secondary continental feature is closely associated with the large scale circulation. The ocean results clearly indicate that rainfall diurnal variability associated with large scale convection is an integral part of the atmospheric general circulation.

Is Transcriptomic Regulation of Berry Development More Important at Night than During the Day?

PubMed Central

Rienth, Markus; Torregrosa, Laurent; Kelly, Mary T.; Luchaire, Nathalie; Pellegrino, Anne; Grimplet, Jérôme; Romieu, Charles

2014-01-01

Diurnal changes in gene expression occur in all living organisms and have been studied on model plants such as Arabidopsis thaliana. To our knowledge the impact of the nycthemeral cycle on the genetic program of fleshly fruit development has been hitherto overlooked. In order to circumvent environmental changes throughout fruit development, young and ripening berries were sampled simultaneously on continuously flowering microvines acclimated to controlled circadian light and temperature changes. Gene expression profiles along fruit development were monitored during both day and night with whole genome microarrays (Nimblegen® vitis 12x), yielding a total number of 9273 developmentally modulated probesets. All day-detected transcripts were modulated at night, whereas 1843 genes were night-specific. Very similar developmental patterns of gene expression were observed using independent hierarchical clustering of day and night data, whereas functional categories of allocated transcripts varied according to time of day. Many transcripts within pathways, known to be up-regulated during ripening, in particular those linked to secondary metabolism exhibited a clearer developmental regulation at night than during the day. Functional enrichment analysis also indicated that diurnally modulated genes considerably varied during fruit development, with a shift from cellular organization and photosynthesis in green berries to secondary metabolism and stress-related genes in ripening berries. These results reveal critical changes in gene expression during night development that differ from daytime development, which have not been observed in other transcriptomic studies on fruit development thus far. PMID:24551177

Is transcriptomic regulation of berry development more important at night than during the day?

PubMed

Rienth, Markus; Torregrosa, Laurent; Kelly, Mary T; Luchaire, Nathalie; Pellegrino, Anne; Grimplet, Jérôme; Romieu, Charles

2014-01-01

Diurnal changes in gene expression occur in all living organisms and have been studied on model plants such as Arabidopsis thaliana. To our knowledge the impact of the nycthemeral cycle on the genetic program of fleshly fruit development has been hitherto overlooked. In order to circumvent environmental changes throughout fruit development, young and ripening berries were sampled simultaneously on continuously flowering microvines acclimated to controlled circadian light and temperature changes. Gene expression profiles along fruit development were monitored during both day and night with whole genome microarrays (Nimblegen® vitis 12x), yielding a total number of 9273 developmentally modulated probesets. All day-detected transcripts were modulated at night, whereas 1843 genes were night-specific. Very similar developmental patterns of gene expression were observed using independent hierarchical clustering of day and night data, whereas functional categories of allocated transcripts varied according to time of day. Many transcripts within pathways, known to be up-regulated during ripening, in particular those linked to secondary metabolism exhibited a clearer developmental regulation at night than during the day. Functional enrichment analysis also indicated that diurnally modulated genes considerably varied during fruit development, with a shift from cellular organization and photosynthesis in green berries to secondary metabolism and stress-related genes in ripening berries. These results reveal critical changes in gene expression during night development that differ from daytime development, which have not been observed in other transcriptomic studies on fruit development thus far.

Expression conservation within the circadian clock of a monocot: natural variation at barley Ppd-H1 affects circadian expression of flowering time genes, but not clock orthologs.

PubMed

Campoli, Chiara; Shtaya, Munqez; Davis, Seth J; von Korff, Maria

2012-06-21

The circadian clock is an endogenous mechanism that coordinates biological processes with daily changes in the environment. In plants, circadian rhythms contribute to both agricultural productivity and evolutionary fitness. In barley, the photoperiod response regulator and flowering-time gene Ppd-H1 is orthologous to the Arabidopsis core-clock gene PRR7. However, relatively little is known about the role of Ppd-H1 and other components of the circadian clock in temperate crop species. In this study, we identified barley clock orthologs and tested the effects of natural genetic variation at Ppd-H1 on diurnal and circadian expression of clock and output genes from the photoperiod-response pathway. Barley clock orthologs HvCCA1, HvGI, HvPRR1, HvPRR37 (Ppd-H1), HvPRR73, HvPRR59 and HvPRR95 showed a high level of sequence similarity and conservation of diurnal and circadian expression patterns, when compared to Arabidopsis. The natural mutation at Ppd-H1 did not affect diurnal or circadian cycling of barley clock genes. However, the Ppd-H1 mutant was found to be arrhythmic under free-running conditions for the photoperiod-response genes HvCO1, HvCO2, and the MADS-box transcription factor and vernalization responsive gene Vrn-H1. We suggest that the described eudicot clock is largely conserved in the monocot barley. However, genetic differentiation within gene families and differences in the function of Ppd-H1 suggest evolutionary modification in the angiosperm clock. Our data indicates that natural variation at Ppd-H1 does not affect the expression level of clock genes, but controls photoperiodic output genes. Circadian control of Vrn-H1 in barley suggests that this vernalization responsive gene is also controlled by the photoperiod-response pathway. Structural and functional characterization of the barley circadian clock will set the basis for future studies of the adaptive significance of the circadian clock in Triticeae species.

Analysis of diurnal and seasonal climate patterns in the Rwenzori Mountains, East Africa, using satellite data and models

NASA Astrophysics Data System (ADS)

Cavagnaro, D. B.; Doughty, A. M.; Hatchett, B.

2016-12-01

The Rwenzori Mountains of Uganda and Democratic Republic of the Congo are one of only three remaining glaciated sites in Africa. Because of their remoteness and sparsity of meteorological data, the climate patterns are not well-known or well understood, which may lead to high uncertainty in glacier mass-balance estimates and paleoclimate reconstructions. This project uses remotely-sensed precipitation data, automatic weather station data, and back-trajectory modeling of air parcels to characterize the diurnal and seasonal climate patterns at the Rwenzori. Of the two wet seasons, we estimate that the short-rains (SON) provide up to 500% more snow accumulation. Precipitation is highly diurnal and driven by convection to the east of the Rwenzori as well as local up-valley convection (Mölg et al., 2003). Back-trajectory modeling shows that precipitation tends to occur at the Rwenzori when airstreams are able to pick up moisture during peak daytime convection on the East African Plateau the day before arriving at the Rwenzori. This relationship is supported by the fact that precipitation rates at the western end of the plateau follow a stronger diurnal cycle than precipitation rates at the eastern end, at Mount Kenya.

Do diurnal patterns of branch carbon uptake and transpiration recover after heat waves? Results from a Mediterranean-type ecosystem experiencing seasonal and exceptional drought

NASA Astrophysics Data System (ADS)

Pivovaroff, A. L.; Pesqueira, A.; Sun, W.; Seibt, U.

2016-12-01

Mediterranean-type ecosystems are biodiversity hotspots, but increasing temperature and changes in precipitation will have significant impacts on vegetation, as evidenced by the current die-back of many woody species in southern California, USA, due to exceptional drought conditions. We installed flow-through chambers on four native woody plant species at Stunt Ranch, a University of California Natural Reserve System site, in order to continuously monitor fluxes of carbon and water at the branch-scale from the growing season through the annual seasonal drought period. Study species included Heteromeles arbutifolia, Malosma laurina, Salvia leucophylla, and Quercus agrifolia. Here we present the results of diurnal flux patterns before, during, and after two extreme heat waves events, when daily maximum temperatures doubled. Under typical summer conditions, which include hot, sunny days, study species exhibited two peaks in carbon assimilation during a diurnal cycle: a peak in the morning and a smaller, secondary peak in the afternoon, separated by a midday depression. During heat wave events, which generally lasted 3 days, species exhibited a small morning peak and no afternoon peak at all. All study species returned to their pre-heat wave diurnal flux patterns, which included the second afternoon peak, when weather conditions returned to normal. Since soil moisture was not affected by the short-term heat wave events, we conclude that the pronounced changes in diurnal patterns, including disappearance of the secondary afternoon peak, are the result of stomatal regulation in response to atmospheric water demand rather than root responses to soil moisture deficits. Our results demonstrate that carbon uptake of native species may be impacted under ongoing climate change when increased temperatures and drought conditions may be sustained.

Diurnal variations of summer precipitation over the regions east to Tibetan Plateau

NASA Astrophysics Data System (ADS)

Wu, Yang; Huang, Anning; Huang, Danqing; Chen, Fei; Yang, Ben; Zhou, Yang; Fang, Dexian; Zhang, Lujun; Wen, Lijuan

2017-12-01

Based on the hourly gauge-satellite merged precipitation product with the horizontal resolution of 0.1° latitude/longitude during 2008-2014, diurnal variations of the summer precipitation amount (PA), frequency (PF), and intensity (PI) with different duration time over the regions east to Tibetan Plateau have been systematically revealed in this study. Results indicate that the eight typical precipitation diurnal patterns identified by the cluster analysis display pronounced regional features among the plateaus, basins, plains, hilly and coastal areas. The precipitation diurnal cycles are significantly affected by the sub-grid terrain fluctuations. The PA, PF and PI of the total rainfall show much more pronounced double diurnal peaks with the sub-grid topography standard deviation (SD) decreased. Meanwhile, the diurnal peaks of PA and PF (PI) strengthen (weaken) with the sub-grid topography SD enhanced. Over the elevated mountain ranges, southeastern hilly and coastal regions, the PA and PF diurnal patterns of the total rainfall generally show predominant late-afternoon peaks, which are closely associated with the short-duration (≤slant 3 h) rainfall. Along the Tibetan Plateau to its downstream, the diurnal peaks of PA, PF and PI for the total rainfall all exhibit obvious eastward phase time delay mainly due to the diurnal evolutions of long-duration (> 6 h) rainfall. However, the 4-6 h rainfall leads to the eastward phase time delay of the total rainfall along the Taihang Mountains to its downstream. Further mechanism analysis suggests that the midnight to morning diurnal evolution of the long-duration rainfall is closely associated with the diurnal variations of the upward branches of thermally driven mountain-plain solenoids and the water vapor transport associated with the accelerated nocturnal southwesterly winds. The late-afternoon peak of the short-duration PA over the southeastern hilly and coastal regions is ascribed to the strong local thermal convections due to the solar heating in afternoon, while the early-evening peak of the short-duration PA over the elevated mountain ranges is significantly contributed by the upward warm-moist wind from the surrounding low-lying basins or plains.

Field observation of diurnal dissolved oxygen fluctuations in shallow groundwater.

PubMed

Schilling, Keith E; Jacobson, Peter

2015-01-01

Dissolved oxygen (DO) concentrations influence many biogeochemical processes in groundwater systems but studies of temporal variability in DO are lacking. In this study, we used an optical DO probe to measure rapid changes in concentration due to plant-groundwater interaction at an alluvial aquifer field site in Iowa. Diurnal DO concentrations were observed during mid- to late-summer when soil conditions were dry, fluctuating approximately 0.2 to 0.3 mg/L on a daily basis. DO fluctuations in groundwater were out-of-phase with diurnal water table fluctuations, increasing during the day and decreasing at night. DO consumption at night is likely due to increased soil autotrophic and heterotrophic respiration linked with patterns of carbon supply derived from daytime photosynthetic activity, and consistent with available literature on diurnal soil respiration patterns. Although more work is needed to quantify specific processes, our results indicate the potential usefulness of the new optical DO technology to reveal insights regarding many ecohydrological processes. © 2014, National Ground Water Association.

Diurnal salivary cortisol and regression status in MECP2 Duplication syndrome

PubMed Central

Peters, Sarika U.; Byiers, Breanne J.; Symons, Frank J.

2015-01-01

MECP2 duplication syndrome is an X-linked genomic disorder that is characterized by infantile hypotonia, intellectual disability, and recurrent respiratory infections. Regression affects a subset of individuals, and the etiology of regression has yet to be examined. In this study, alterations in the hypothalamus-pituitary-adrenal axis, including diurnal patterns in salivary cortisol, were examined in four males with MECP2 duplication syndrome who had regression, and four males with the same syndrome without regression (ages 3–22 years). Individuals who had experienced regression do not exhibit typical diurnal cortisol rhythms, and their profiles were flatter through the day. In contrast, individuals with MECP2 duplication syndrome who had not experienced regression showed more typical patterns of higher cortisol levels in the morning with linear decreases throughout the day. This study is the first to suggest a link between atypical diurnal cortisol rhythms and regression status in MECP2 duplication syndrome, and may have implications for treatment. PMID:25999300

Environmental influence of problematic social relationships on adolescents' daily cortisol secretion: a monozygotic twin-difference study.

PubMed

Brendgen, M; Ouellet-Morin, I; Lupien, S J; Vitaro, F; Dionne, G; Boivin, M

2017-02-01

This study investigated the potential environmental effects of peer victimization and the quality of relationships with parents and friends on diurnal cortisol secretion in mid-adolescence. This study used the monozygotic (MZ) twin-difference design to control for genetic effects and thus estimate the unique environmental influences on diurnal cortisol. Participants were 136 MZ twin pairs (74 female pairs) for whom cortisol was assessed four times per day over four collection days grouped in a 2-week period in grade 8 (mean age = 14.07 years). Participants also provided self-reports of peer victimization from grade 4 to grade 8 and of the relationship quality with the mother, father and best friend in grade 8. The expected pattern of diurnal cortisol secretion was observed, with high levels at awakening followed by an increase 30 min later and a progressive decrease subsequently. Controlling for a host of confounders, only within-twin pair differences in peer victimization and a problematic relationship with the mother were significantly linked to twin differences in diurnal cortisol secretion. Specifically, whereas a more problematic mother-child relationship was associated with morning cortisol secretion, peer victimization was linked to cortisol secretion later in the day (diurnal slope). Controlling for genetic influences and other confounders, stressful relationships with peers and the mother exert unique and time-specific environmental influences on the pattern of diurnal cortisol secretion in mid-adolescence.

Diurnal patterns of branch movement in a desert shrub (Larrea tridentata) track hydraulic stress

NASA Astrophysics Data System (ADS)

Hallmark, A.

2016-12-01

Near-surface, repeat digital photography has emerged as a powerful tool to collect continuous observations of plant traits of individuals and communities across daily, seasonal, and annual time scales. To date, this technology has largely been used to detect patterns of vegetative phenology or "canopy greenness." Little work has been done to use digital photographs to quantify changes in canopy structure or shifts in canopy function on shorter time scales. In this study, we tracked the position of creosote (Larrea tridentata) branches using a timeseries of photos taken in a creosote-dominated shrubland in central New Mexico, USA where radiation, temperature, humidity, soil water content, soil water potential, and stem water potential were also measured. We found that both living and dead woody branches displayed dramatic diurnal patterns of movement, with shrubs only 1-2 m in height sometimes undergoing vertical shifts in branch position of over 0.25 m and changes in branch angle of over 20 degrees. Although circadian rhythms in plants are often attributed to cyclical patterns of photoperiod or temperature, we found that creosote branch movements were best correlated with diurnal changes in stem water potential and atmospheric humidity and that this correlation was stronger under wetter soil conditions. Branches were straighter and oriented in higher positions in times of low hydraulic stress, possibly preparing the creosote to better capture moisture via stemflow. Branches were oriented lower to the ground in times of high hydraulic stress, possibly providing more shade and reducing soil evaporation beneath the base of the shrub. To our knowledge, this is the first study to describe diurnal patterns of branch movements in creosote and is the most extensive dataset of observations of diurnal movements in any woody plant. It provides more knowledge about the biology of a desert shrub, but also offers novel methods for using repeat digital photography to gain inferences about plant form and function.

Daily positive events and diurnal cortisol rhythms: Examination of between-person differences and within-person variation.

PubMed

Sin, Nancy L; Ong, Anthony D; Stawski, Robert S; Almeida, David M

2017-09-01

Growing evidence from field studies has linked daily stressors to dysregulated patterns of diurnal cortisol. Less is known about whether naturally-occurring positive events in everyday life are associated with diurnal cortisol. The objectives of this study were to evaluate daily positive events as predictors of between-person differences and within-person (day-to-day) variations in diurnal cortisol parameters, in addition to daily positive events as buffers against the associations between daily stressors and cortisol. In the National Study of Daily Experiences, 1657 adults ages 33-84 (57% female) reported daily experiences during telephone interviews on 8 consecutive evenings. Saliva samples were collected 4 times per day on 4 interview days and assayed for cortisol. Multilevel models were used to estimate associations of daily positive events with cortisol awakening response (CAR), diurnal cortisol slope, and area under the curve (AUC). At the between-person level, people who experienced more frequent positive events exhibited a steeper diurnal cortisol slope, controlling for daily stressors, daily affect, and other covariates. At the within-person level, positive events in the morning (but not prior-night or afternoon/evening events) predicted steeper decline in cortisol across that day; positive events were also marginally associated with lower same-day AUC. Associations were not mediated by daily positive affect, and positive events did not buffer against stressor-related cortisol alterations. These findings indicate that individual differences and day-to-day variations in daily positive events are associated with diurnal cortisol patterns, independent of stressors and affect. Copyright © 2017 Elsevier Ltd. All rights reserved.

Atmospheric diurnal and semi-diurnal variations observed with GPS radio occultation soundings

NASA Astrophysics Data System (ADS)

Xie, F.; Wu, D. L.; Ao, C. O.; Mannucci, A. J.

2009-11-01

Diurnal and semi-diurnal variations, driven by solar forcing, are two fundamental modes in the Earth's weather and climate system. Radio occultation (RO) measurements from the six COSMIC satellites (Constellation Observing System for Meteorology Ionosphere and Climate) provide rather uniform global coverage with high vertical resolution, all-weather and diurnal sampling capability. This paper analyzes the diurnal and semi-diurnal variations of both temperature and refractivity from two-year (2007-2008) COSMIC RO measurements in the troposphere and stratosphere. The RO observations reveal both propagating and trapped vertical structures of diurnal and semi-diurnal variations, including transition regions near the tropopause where data with high vertical resolution are critical. In the tropics the diurnal amplitude in refractivity decreases with altitude from a local maximum in the planetary boundary layer and reaches the minimum around 14 km and then further increase amplitude in the stratosphere. The upward propagating component of the migrating diurnal tides in the tropics is clearly captured by the GPS RO measurements, which show a downward progression in phase from upper troposphere to the stratopause with a vertical wavelength of about 25 km. Below 500 hPa (~5.5 km), seasonal variations of the peak diurnal amplitude in the tropics follow the solor forcing change in latitude, while at 30 km the seasonal pattern reverses with the diurnal amplitude peaking at the opposite side of the equator relative to the solar forcing. Polar regions shows large diurnal variations in the stratosphere with strong seasonal variations and the cause(s) of these variations require further investigations.

Effects of photophase illuminance on locomotor activity, urine production and urinary 6-sulfatoxymelatonin in nocturnal and diurnal South African rodents.

PubMed

van der Merwe, Ingrid; Oosthuizen, Maria K; Ganswindt, Andre; Haim, Abraham; Bennett, Nigel C

2017-05-01

Effects of photophase illuminance (1, 10, 100 and 330 lx of white incandescent lighting) on daily rhythms of locomotor activity, urine production and 6-sulfatoxymelatonin (6-SMT; 10 versus 330 lx) were studied in nocturnal Namaqua rock mice ( Micaelamys namaquensis ) and diurnal four-striped field mice ( Rhabdomys pumilio ). Micaelamys namaquensis was consistently nocturnal (∼90-94% nocturnal activity), whereas considerable individual variation marked activity profiles in R. pumilio , but with activity mostly pronounced around twilight (∼55-66% diurnal activity). The amplitude of daily activity was distinctly affected by light intensity and this effect was greater in M. namaquensis than in R. pumilio Only M. namaquensis displayed a distinctive daily rhythm of urine production, which correlated with its activity rhythm. Mean daily urine production appeared to be attenuated under dim photophase conditions, particularly in R. pumilio The results suggest that the circadian regulation of locomotor activity and urine production possesses separate sensitivity thresholds to photophase illuminance. Micaelamys namaquensis expressed a significant daily 6-SMT rhythm that peaked during the late night, but the rhythm was attenuated by the brighter photophase cycle (330 lx). Rhabdomys pumilio appeared to express an ultradian 6-SMT rhythm under both lighting regimes with comparable mean daily 6-SMT values, but with different temporal patterns. It is widely known that a natural dark phase which is undisturbed by artificial light is essential for optimal circadian function. Here, we show that light intensity during the photophase also plays a key role in maintaining circadian rhythms in rodents, irrespective of their temporal activity rhythm. © 2017. Published by The Company of Biologists Ltd.

Regional Patterns of Stress Transfer in the Ablation Zone of the Western Greenland Ice Sheet

NASA Astrophysics Data System (ADS)

Andrews, L. C.; Hoffman, M. J.; Neumann, T.; Catania, G. A.; Luethi, M. P.; Hawley, R. L.

2016-12-01

Current understanding of the subglacial system indicates that the seasonal evolution of ice flow is strongly controlled by the gradual upstream progression of an inefficient - efficient transition within the subglacial hydrologic system followed by the reduction of melt and a downstream collapse of the efficient system. Using a spatiotemporally dense network of GPS-derived surface velocities from the Pâkitsoq Region of the western Greenland Ice Sheet, we find that this pattern of subglacial development is complicated by heterogeneous bed topography, resulting in complex patterns of ice flow. Following low elevation melt onset, early melt season strain rate anomalies are dominated by regional extension, which then gives way to spatially expansive compression. However, once daily minimum ice velocities fall below the observed winter background velocities, an alternating spatial pattern of extension and compression prevails. This pattern of strain rate anomalies is correlated with changing basal topography and differences in the magnitude of diurnal surface ice speeds. Along subglacial ridges, diurnal variability in ice speed is large, suggestive of a mature, efficient subglacial system. In regions of subglacial lows, diurnal variability in ice velocity is relatively low, likely associated with a less developed efficient subglacial system. The observed pattern suggests that borehole observations and modeling results demonstrating the importance of longitudinal stress transfer at a single field location are likely widely applicable in our study area and other regions of the Greenland Ice Sheet with highly variable bed topography. Further, the complex pattern of ice flow and evidence of spatially extensive longitudinal stress transfer add to the body of work indicating that the bed character plays an important role in the development of the subglacial system; closely matching diurnal ice velocity patterns with subglacial models may be difficult without coupling these models to high order ice flow models.

Salivary Alpha-Amylase Reactivity in Breast Cancer Survivors

PubMed Central

Wan, Cynthia; Couture-Lalande, Marie-Ève; Narain, Tasha A.; Lebel, Sophie; Bielajew, Catherine

2016-01-01

The two main components of the stress system are the hypothalamic-pituitary-adrenal (HPA) and sympathetic-adrenal-medullary (SAM) axes. While cortisol has been commonly used as a biomarker of HPA functioning, much less attention has been paid to the role of the SAM in this context. Studies have shown that long-term breast cancer survivors display abnormal reactive cortisol patterns, suggesting a dysregulation of their HPA axis. To fully understand the integrity of the stress response in this population, this paper explored the diurnal and acute alpha-amylase profiles of 22 breast cancer survivors and 26 women with no history of cancer. Results revealed that breast cancer survivors displayed identical but elevated patterns of alpha-amylase concentrations in both diurnal and acute profiles relative to that of healthy women, F (1, 39) = 17.95, p < 0.001 and F (1, 37) = 7.29, p = 0.010, respectively. The average area under the curve for the diurnal and reactive profiles was 631.54 ± 66.94 SEM and 1238.78 ± 111.84 SEM, respectively. This is in sharp contrast to their cortisol results, which showed normal diurnal and blunted acute patterns. The complexity of the stress system necessitates further investigation to understand the synergistic relationship of the HPA and SAM axes. PMID:27023572

Salivary Alpha-Amylase Reactivity in Breast Cancer Survivors.

PubMed

Wan, Cynthia; Couture-Lalande, Marie-Ève; Narain, Tasha A; Lebel, Sophie; Bielajew, Catherine

2016-03-23

The two main components of the stress system are the hypothalamic-pituitary-adrenal (HPA) and sympathetic-adrenal-medullary (SAM) axes. While cortisol has been commonly used as a biomarker of HPA functioning, much less attention has been paid to the role of the SAM in this context. Studies have shown that long-term breast cancer survivors display abnormal reactive cortisol patterns, suggesting a dysregulation of their HPA axis. To fully understand the integrity of the stress response in this population, this paper explored the diurnal and acute alpha-amylase profiles of 22 breast cancer survivors and 26 women with no history of cancer. Results revealed that breast cancer survivors displayed identical but elevated patterns of alpha-amylase concentrations in both diurnal and acute profiles relative to that of healthy women, F (1, 39) = 17.95, p < 0.001 and F (1, 37) = 7.29, p = 0.010, respectively. The average area under the curve for the diurnal and reactive profiles was 631.54 ± 66.94 SEM and 1238.78 ± 111.84 SEM, respectively. This is in sharp contrast to their cortisol results, which showed normal diurnal and blunted acute patterns. The complexity of the stress system necessitates further investigation to understand the synergistic relationship of the HPA and SAM axes.

Ranges of diurnal variation and the pattern of body temperature, blood pressure and heart rate in laboratory beagle dogs.

PubMed

Miyazaki, Hiroyasu; Yoshida, Mutsumi; Samura, Keiji; Matsumoto, Hiroyoshi; Ikemoto, Fumihiko; Tagawa, Masahiro

2002-01-01

Ranges in diurnal variation and the patterns of body temperature (T), blood pressure (BP), heart rate (HR) and locomotor activity (LA) in 61 laboratory beagle dogs were analyzed using a telemetry system. Body temperature, BP, HR and LA increased remarkably at feeding time. Locomotor activity increased sporadically during the other periods. Body temperature was maintained at the higher value after feeding but had decreased by 0.2 C by early the next morning. Blood pressure fell to a lower value after feeding but had increased by 2.8% by early the next morning. Heart rate decreased progressively after feeding and was 14.5% lower the next morning. This study determined that in laboratory beagles the ranges of diurnal variation and patterns of T, BP and HR are significantly different from those reported in humans and rodents, and that over 24 hr these physiological changes were associated with their sporadic wake-sleep cycles of the dogs.

Extent and character of circadian gene expression in Drosophila melanogaster: identification of twenty oscillating mRNAs in the fly head.

PubMed

Van Gelder, R N; Bae, H; Palazzolo, M J; Krasnow, M A

1995-12-01

Although mRNAs expressed with a circadian rhythm have been isolated from many species, the extent and character of circadianly regulated gene expression is unknown for any animal. In Drosophila melanogaster, only the period (per) gene, an essential component of the circadian pacemaker, is known to show rhythmic mRNA expression. Recent work suggests that the encoded Per protein controls its own transcription by an autoregulatory feedback loop. Per might also control the rhythmic expression of other genes to generate circadian behavior and physiology. The goals of this work were to evaluate the extent and character of circadian control of gene expression in Drosophila, and to identify genes dependent on per for circadian expression. A large collection of anonymous, independent cDNA clones was used to screen for transcripts that are rhythmically expressed in the fly head. 20 of the 261 clones tested detected mRNAs with a greater than two-fold daily change in abundance. Three mRNAs were maximally expressed in the morning, whereas 17 mRNAs were most abundant in the evening--when per mRNA is also maximally expressed (but when the flies are inactive). Further analysis of the three 'morning' cDNAs showed that each has a unique dependence on the presence of a light-dark cycle, on timed feeding, and on the function of the per gene for its oscillation. These dependencies were different from those determined for per and for a novel 'evening' gene. Sequence analysis indicated that all but one of the 20 cDNAs identified previously uncloned genes. Diurnal control of gene expression is a significant but limited phenomenon in the fly head, which involves many uncharacterized genes. Diurnal control is mediated by multiple endogenous and exogenous mechanisms, even at the level of individual genes. A subset of circadianly expressed genes are predominantly or exclusively dependent on per for their rhythmic expression. The per gene can therefore influence the expression of genes other than itself, but for many rhythmically expressed genes, per functions in conjunction with external inputs to control their daily expression patterns.

The pivotal role of aristaless in development and evolution of diverse antennal morphologies in moths and butterflies.

PubMed

Ando, Toshiya; Fujiwara, Haruhiko; Kojima, Tetsuya

2018-01-25

Antennae are multi-segmented appendages and main odor-sensing organs in insects. In Lepidoptera (moths and butterflies), antennal morphologies have diversified according to their ecological requirements. While diurnal butterflies have simple, rod-shaped antennae, nocturnal moths have antennae with protrusions or lateral branches on each antennal segment for high-sensitive pheromone detection. A previous study on the Bombyx mori (silk moth) antenna, forming two lateral branches per segment, during metamorphosis has revealed the dramatic change in expression of antennal patterning genes to segmentally reiterated, branch-associated pattern and abundant proliferation of cells contributing almost all the dorsal half of the lateral branch. Thus, localized cell proliferation possibly controlled by the branch-associated expression of antennal patterning genes is implicated in lateral branch formation. Yet, actual gene function in lateral branch formation in Bombyx mori and evolutionary mechanism of various antennal morphologies in Lepidoptera remain elusive. We investigated the function of several genes and signaling specifically in lateral branch formation in Bombyx mori by the electroporation-mediated incorporation of siRNAs or morpholino oligomers. Knock down of aristaless, a homeobox gene expressed specifically in the region of abundant cell proliferation within each antennal segment, during metamorphosis resulted in missing or substantial shortening of lateral branches, indicating its importance for lateral branch formation. aristaless expression during metamorphosis was lost by knock down of Distal-less and WNT signaling but derepressed by knock down of Notch signaling, suggesting the strict determination of the aristaless expression domain within each antennal segment by the combinatorial action of them. In addition, analyses of pupal aristaless expression in antennae with various morphologies of several lepidopteran species revealed that the aristaless expression pattern has a striking correlation with antennal shapes, whereas the segmentally reiterated expression pattern was observed irrespective of antennal morphologies. Our results presented here indicate the significance of aristaless function in lateral branch formation in B. mori and imply that the diversification in the aristaless expression pattern within each antennal segment during metamorphosis is one of the significant determinants of antennal morphologies. According to these findings, we propose a mechanism underlying development and evolution of lepidopteran antennae with various morphologies.

Diurnal variations and source apportionment of ozone at the summit of Mount Huang, a rural site in Eastern China.

PubMed

Gao, J; Zhu, B; Xiao, H; Kang, H; Hou, X; Yin, Y; Zhang, L; Miao, Q

2017-03-01

Comprehensive measurements were conducted at the summit of Mount (Mt.) Huang, a rural site located in eastern China during the summer of 2011. They observed that ozone showed pronounced diurnal variations with high concentrations at night and low values during daytime. The Weather Research and Forecasting with Chemistry (WRF-Chem) model was applied to simulate the ozone concentrations at Mt. Huang in June 2011. With processes analysis and online ozone tagging method we coupled into the model system, the causes of this diurnal pattern and the contributions from different source regions were investigated. Our results showed that boundary layer diurnal cycle played an important role in driving the ozone diurnal variation. Further analysis showed that the negative contribution of vertical mixing was significant, resulting in the ozone decrease during the daytime. In contrast, ozone increased at night owing to the significant positive contribution of advection. This shifting of major factor between vertical mixing and advection formed this diurnal variation. Ozone source apportionment results indicated that approximately half was provided by inflow effect of ozone from outside the model domain (O 3-INFLOW ) and the other half was formed by ozone precursors (O 3-PBL ) emitted in eastern, central, and southern China. In the O 3-PBL , 3.0% of the ozone was from Mt. Huang reflecting the small local contribution (O 3-LOC ) and the non-local contributions (O 3-NLOC ) accounted for 41.6%, in which ozone from the southerly regions contributed significantly, for example, 9.9% of the ozone originating from Jiangxi, representing the highest geographical contributor. Because the origin and variation of O 3-NLOC was highly related to the diurnal movements in boundary layer, the similar diurnal patterns between O 3-NLOC and total ozone both indicated the direct influence of O 3-NLOC and the importance of boundary layer diurnal variations in the formation of such distinct diurnal ozone variations at Mt. Huang. Copyright © 2016 Elsevier Ltd. All rights reserved.

Genetics and evolution of colour patterns in reptiles.

PubMed

Olsson, Mats; Stuart-Fox, Devi; Ballen, Cissy

2013-01-01

The study of coloration in the polyphyletic reptilians has flourished in the last two decades, in particular with respect to the underlying genetics of colour traits, the function of colours in social interactions, and ongoing selection on these traits in the wild. The taxonomic bias, however, is profound: at this level of resolution almost all available information is for diurnal lizards. Therefore, we focus on case studies, for which there are as complete causal sequences of colour evolution as possible, from phenotypic expression of variation in colour, to ongoing selection in the wild. For work prior to 1992 and for a broader coverage of reptilian coloration we refer the readers to Cooper and Greenburg's (Biology of the Reptilia, 1992) review. There are seven major conclusions we would like to emphasise: (a) visual systems in diurnal lizards are broadly conserved but among the wider range of reptiles in general, there is functionally important variation in the number and type of photoreceptors, spectral tuning of photopigments and optical properties of the eye; (b) coloration in reptiles is a function of complex interactions between structural and pigmentary components, with implications for both proximate control and condition dependence of colour expression; (c) studies of colour-variable species have enabled estimates of heritability of colour and colour patterns, which often show a simple Mendelian pattern of inheritance; (d) colour-polymorphic lizard species sometimes, but not always, show striking differences in genetically encoded reproductive tactics and provide useful models for studying the evolution and maintenance of polymorphism; (e) both male and female colours are sometimes, but not always, a significant component of socio-sexual signalling, often based on multiple traits; (f) evidence for effects of hormones and condition on colour expression, and trade-offs with immunocompetence and parasite load, is variable; (g) lizards show fading of colours in response to physiological stress and ageing and are hence likely to be appropriate models for work on the interactions between handicaps, indicator traits, parasitology and immunoecology. Copyright © 2013 Elsevier Ltd. All rights reserved.

Diurnal Variability and Emission Pattern of Decamethylcyclopentasiloxane (D5) from the Application of Personal Care Products in Two North American Cities.

PubMed

Coggon, Matthew M; McDonald, Brian C; Vlasenko, Alexander; Veres, Patrick R; Bernard, François; Koss, Abigail R; Yuan, Bin; Gilman, Jessica B; Peischl, Jeff; Aikin, Kenneth C; DuRant, Justin; Warneke, Carsten; Li, Shao-Meng; de Gouw, Joost A

2018-05-15

Decamethylcyclopentasiloxane (D 5 ) is a cyclic volatile methyl siloxane (cVMS) that is widely used in consumer products and commonly observed in urban air. This study quantifies the ambient mixing ratios of D 5 from ground sites in two North American cities (Boulder, CO, USA, and Toronto, ON, CA). From these data, we estimate the diurnal emission profile of D 5 in Boulder, CO. Ambient mixing ratios were consistent with those measured at other urban locations; however, the diurnal pattern exhibited similarities with those of traffic-related compounds such as benzene. Mobile measurements and vehicle experiments demonstrate that emissions of D 5 from personal care products are coincident in time and place with emissions of benzene from motor vehicles. During peak commuter times, the D 5 /benzene ratio (w/w) is in excess of 0.3, suggesting that the mass emission rate of D 5 from personal care product usage is comparable to that of benzene due to traffic. The diurnal emission pattern of D 5 is estimated using the measured D 5 /benzene ratio and inventory estimates of benzene emission rates in Boulder. The hourly D 5 emission rate is observed to peak between 6:00 and 7:00 AM and subsequently follow an exponential decay with a time constant of 9.2 h. This profile could be used by models to constrain temporal emission patterns of personal care products.

The parathyroid hormone circadian rhythm is truly endogenous--a general clinical research center study

NASA Technical Reports Server (NTRS)

el-Hajj Fuleihan, G.; Klerman, E. B.; Brown, E. N.; Choe, Y.; Brown, E. M.; Czeisler, C. A.

1997-01-01

While circulating levels of PTH follow a diurnal pattern, it has been unclear whether these changes are truly endogenous or are dictated by external factors that themselves follow a diurnal pattern, such as sleep-wake cycles, light-dark cycles, meals, or posture. We evaluated the diurnal rhythm of PTH in 11 normal healthy male volunteers in our Intensive Physiologic Monitoring Unit. The first 36 h spent under baseline conditions were followed by 28-40 h of constant routine conditions (CR; enforced wakefulness in the strict semirecumbent position, with the consumption of hourly snacks). During baseline conditions, PTH levels followed a bimodal diurnal rhythm with an average amplitude of 4.2 pg/mL. A primary peak (t1max) occurred at 0314 h, and the secondary peak (t2max) occurred at 1726 h, whereas the primary and secondary nadirs (t1min and t2min) took place, on the average, at 1041 and 2103 h, respectively. This rhythm was preserved under CR conditions, albeit with different characteristics, thus confirming its endogenous nature. The serum ionized calcium (Cai) demonstrated a rhythm in 3 of the 5 subjects studied that varied widely between individuals and did not have any apparent relation to PTH. Urinary calcium/creatinine (UCa/Cr), phosphate/Cr (UPO4/Cr), and sodium/Cr (UNa/Cr) ratios all followed a diurnal rhythm during the baseline day. These rhythms persisted during the CR, although with different characteristics for the first two parameters, whereas that of UNa/Cr was unchanged. In general, the temporal pattern for the UCa/Cr curve was a mirror image of the PTH curve, whereas the UPO4/Cr pattern moved in parallel with the PTH curve. In conclusion, PTH levels exhibit a diurnal rhythm that persists during a CR, thereby confirming that a large component of this rhythm is an endogenous circadian rhythm. The clinical relevance of this rhythm is reflected in the associated rhythms of biological markers of PTH effect at the kidney, namely UCa/Cr and UPO4/Cr.

Satellite, climatological, and theoretical inputs for modeling of the diurnal cycle of fire emissions

NASA Astrophysics Data System (ADS)

Hyer, E. J.; Reid, J. S.; Schmidt, C. C.; Giglio, L.; Prins, E.

2009-12-01

The diurnal cycle of fire activity is crucial for accurate simulation of atmospheric effects of fire emissions, especially at finer spatial and temporal scales. Estimating diurnal variability in emissions is also a critical problem for construction of emissions estimates from multiple sensors with variable coverage patterns. An optimal diurnal emissions estimate will use as much information as possible from satellite fire observations, compensate known biases in those observations, and use detailed theoretical models of the diurnal cycle to fill in missing information. As part of ongoing improvements to the Fire Location and Monitoring of Burning Emissions (FLAMBE) fire monitoring system, we evaluated several different methods of integrating observations with different temporal sampling. We used geostationary fire detections from WF_ABBA, fire detection data from MODIS, empirical diurnal cycles from TRMM, and simple theoretical diurnal curves based on surface heating. Our experiments integrated these data in different combinations to estimate the diurnal cycles of emissions for each location and time. Hourly emissions estimates derived using these methods were tested using an aerosol transport model. We present results of this comparison, and discuss the implications of our results for the broader problem of multi-sensor data fusion in fire emissions modeling.

Mars climatology from viking 1 after 20 sols.

PubMed

Hess, S L; Henry, R M; Leovy, C B; Ryan, J A; Tillman, J E; Chamberlain, T E; Cole, H L; Dutton, R G; Greene, G C; Simon, W E; Mitchell, J L

1976-10-01

The results from the meteorology instruments on the Viking 1 lander are presented for the first 20 sols of operation. The daily patterns of temperature, wind, and pressure have been highly consistent during the period. Hence, these have been assembled into 20-sol composites and analyzed harmonically. Maximum temperature was 241.8 degrees K and minimum 187.2 degrees K. The composite wind vector has a mean diurnal magnitude of 2.4 meters per second with prevailing wind from the south and counterclockwise diurnal rotation. Pressure exhibits diurnal and semidiurnal oscillations. The diurnal is ascribed to a combination of effects, and the semidiurnal appears to be the solar semidiurnal tide. Similarities to Earth are discussed. A major finding is a continual secular decrease in diurnal mean pressure. This is ascribed to carbon dioxide deposition at the south polar cap.

Comparative Analysis of Vertebrate Diurnal/Circadian Transcriptomes

PubMed Central

Boyle, Greg; Richter, Kerstin; Priest, Henry D.; Traver, David; Mockler, Todd C.; Chang, Jeffrey T.; Kay, Steve A.

2017-01-01

From photosynthetic bacteria to mammals, the circadian clock evolved to track diurnal rhythms and enable organisms to anticipate daily recurring changes such as temperature and light. It orchestrates a broad spectrum of physiology such as the sleep/wake and eating/fasting cycles. While we have made tremendous advances in our understanding of the molecular details of the circadian clock mechanism and how it is synchronized with the environment, we still have rudimentary knowledge regarding its connection to help regulate diurnal physiology. One potential reason is the sheer size of the output network. Diurnal/circadian transcriptomic studies are reporting that around 10% of the expressed genome is rhythmically controlled. Zebrafish is an important model system for the study of the core circadian mechanism in vertebrate. As Zebrafish share more than 70% of its genes with human, it could also be an additional model in addition to rodent for exploring the diurnal/circadian output with potential for translational relevance. Here we performed comparative diurnal/circadian transcriptome analysis with established mouse liver and other tissue datasets. First, by combining liver tissue sampling in a 48h time series, transcription profiling using oligonucleotide arrays and bioinformatics analysis, we profiled rhythmic transcripts and identified 2609 rhythmic genes. The comparative analysis revealed interesting features of the output network regarding number of rhythmic genes, proportion of tissue specific genes and the extent of transcription factor family expression. Undoubtedly, the Zebrafish model system will help identify new vertebrate outputs and their regulators and provides leads for further characterization of the diurnal cis-regulatory network. PMID:28076377

Assessing the sources and magnitude of diurnal nitrate variability in the San Joaquin River (California) with an in situ optical nitrate sensor and dual nitrate isotopes

USGS Publications Warehouse

Pellerin, Brian A.; Downing, Bryan D.; Kendall, Carol; Dahlgren, Randy A.; Kraus, Tamara E.C.; Saraceno, John Franco; Spencer, Robert G. M.; Bergamaschi, Brian A.

2009-01-01

1. We investigated diurnal nitrate (NO3−) concentration variability in the San Joaquin River using an in situ optical NO3− sensor and discrete sampling during a 5‐day summer period characterized by high algal productivity. Dual NO3− isotopes (δ15NNO3 and δ18ONO3) and dissolved oxygen isotopes (δ18ODO) were measured over 2 days to assess NO3− sources and biogeochemical controls over diurnal time‐scales.2. Concerted temporal patterns of dissolved oxygen (DO) concentrations and δ18ODOwere consistent with photosynthesis, respiration and atmospheric O2 exchange, providing evidence of diurnal biological processes independent of river discharge.3. Surface water NO3− concentrations varied by up to 22% over a single diurnal cycle and up to 31% over the 5‐day study, but did not reveal concerted diurnal patterns at a frequency comparable to DO concentrations. The decoupling of δ15NNO3 and δ18ONO3isotopes suggests that algal assimilation and denitrification are not major processes controlling diurnal NO3− variability in the San Joaquin River during the study. The lack of a clear explanation for NO3− variability likely reflects a combination of riverine biological processes and time‐varying physical transport of NO3− from upstream agricultural drains to the mainstem San Joaquin River.4. The application of an in situ optical NO3− sensor along with discrete samples provides a view into the fine temporal structure of hydrochemical data and may allow for greater accuracy in pollution assessment.

Diurnal Variation in the Basal Emission Rate of Isoprene

Treesearch

Jennifer Funk; Clive G. Jones; Christine J. Baker; Heather M. Fuller; Christian P. Giardina; Manuel T. Lerdua

2003-01-01

Isoprene is emitted from numerous plant species and profoundly influences tropospheric chemistry. Due to the short lifetime of isoprene in the atmosphere, developing an understanding of emission patterns at small time scales is essential for modeling regional atmospheric chemistry processes. Previous studies suggest that diurnal fluctuations in isoprene emission may be...

Sampling of the Diurnal Cycle of Precipitation using TRMM

NASA Technical Reports Server (NTRS)

Negri, Andrew J.; Bell, Thomas L.; Xu, Li-Ming; Starr, David OC. (Technical Monitor)

2001-01-01

We examine the temporal sampling of tropical regions using observations from the Tropical Rainfall Measuring Mission (TRMM) Microwave Imager (TMI) and Precipitation Radar (PR). We conclude that PR estimates at any one hour, even using three years of data, are inadequate to describe the diurnal cycle of precipitation over regions smaller than 12 degrees, due to high spatial variability in sampling. We show that the optimum period of accumulation is four hours. Diurnal signatures display half as much sampling error when averaged over four hours of local time. A similar pattern of sampling variability is found in the TMI data, despite the TMI's wider swath and increased sampling. These results are verified using an orbital model. The sensitivity of the sampling to satellite altitude is presented, as well as sampling patterns at the new TRMM altitude of 402.5 km.

Diurnal rhythm and concordance between objective and subjective hot flashes: the Hilo Women's Health Study.

PubMed

Sievert, Lynnette L; Reza, Angela; Mills, Phoebe; Morrison, Lynn; Rahberg, Nichole; Goodloe, Amber; Sutherland, Michael; Brown, Daniel E

2010-01-01

The aims of this study were to test for a diurnal pattern in hot flashes in a multiethnic population living in a hot, humid environment and to examine the rates of concordance between objective and subjective measures of hot flashes using ambulatory and laboratory measures. Study participants aged 45 to 55 years were recruited from the general population of Hilo, HI. Women wore a Biolog hot flash monitor (UFI, Morro Bay, CA), kept a diary for 24 hours, and also participated in 3-hour laboratory measures (n = 199). Diurnal patterns were assessed using polynomial regression. For each woman, objectively recorded hot flashes that matched subjective experience were treated as true-positive readings. Subjective hot flashes were considered the standard for computing false-positive and false-negative readings. True-positive, false-positive, and false-negative readings were compared across ethnic groups by chi analyses. Frequencies of sternal, nuchal, and subjective hot flashes peaked at 1500 +/- 1 hours with no difference by ethnicity. Laboratory results supported the pattern seen in ambulatory monitoring. Sternal and nuchal monitoring showed the same frequency of true-positive measures, but nonsternal electrodes picked up more false-positive readings. Laboratory monitoring showed very low frequencies of false negatives. There were no ethnic differences in the frequency of true-positive or false-positive measures. Women of European descent were more likely to report hot flashes that were not objectively demonstrated (false-negative measures). The diurnal pattern and peak in hot flash occurrence in the hot humid environment of Hilo were similar to results from more temperate environments. Lack of variation in sternal versus nonsternal measures and in true-positive measures across ethnicities suggests no appreciable effect of population variation in sweating patterns.

Diurnal rhythm and concordance between objective and subjective hot flashes: The Hilo Women’s Health Study

PubMed Central

Sievert, Lynnette L.; Reza, Angela; Mills, Phoebe; Morrison, Lynn; Rahberg, Nichole; Goodloe, Amber; Sutherland, Michael; Brown, Daniel E.

2010-01-01

Objective To test for a diurnal pattern in hot flashes in a multi-ethnic population living in a hot, humid environment. To examine rates of concordance between objective and subjective measures of hot flashes using ambulatory and laboratory measures. Methods Study participants aged 45–55 were recruited from the general population of Hilo, Hawaii. Women wore a Biolog hot flash monitor, kept a diary for 24-hours, and also participated in 3-hour laboratory measures (n=199). Diurnal patterns were assessed using polynomial regression. For each woman, objectively recorded hot flashes that matched subjective experience were treated as true positive readings. Subjective hot flashes were considered the standard for computing false positive and false negative readings. True positive, false positive, and false negative readings were compared across ethnic groups by chi-square analyses. Results Frequencies of sternal, nuchal and subjective hot flashes peaked at 15:00 ± 1 hour with no difference by ethnicity. Laboratory results supported the pattern seen in ambulatory monitoring. Sternal and nuchal monitoring showed the same frequency of true positive measures, but non-sternal electrodes picked up more false positive readings. Laboratory monitoring showed very low frequencies of false negatives. There were no ethnic differences in the frequency of true positive or false positive measures. Women of European descent were more likely to report hot flashes that were not objectively demonstrated (false negative measures). Conclusions The diurnal pattern and peak in hot flash occurrence in the hot humid environment of Hilo was similar to results from more temperate environments. Lack of variation in sternal vs. non-sternal measures, and in true positive measures across ethnicities suggests no appreciable effect of population variation in sweating patterns. PMID:20220538

Approximate analytical solution to diurnal atmospheric boundary-layer growth under well-watered conditions

USDA-ARS?s Scientific Manuscript database

The system of governing equations of a simplified slab model of the uniformly-mixed, purely convective, diurnal atmospheric boundary layer (ABL) is shown to allow immediate solutions for the potential temperature and specific humidity as functions of the ABL height and net radiation when expressed i...

Understanding the influence of orography on the precipitation diurnal cycle and the associated atmospheric processes in the central Andes

NASA Astrophysics Data System (ADS)

Junquas, C.; Takahashi, K.; Condom, T.; Espinoza, J.-C.; Chavez, S.; Sicart, J.-E.; Lebel, T.

2018-06-01

In the tropical Andes, the identification of the present synoptic mechanisms associated with the diurnal cycle of precipitation and its interaction with orography is a key step to understand how the atmospheric circulation influences the patterns of precipitation variability on longer time-scales. In particular we aim to better understand the combination of the local and regional mechanisms controlling the diurnal cycle of summertime (DJF) precipitation in the Northern Central Andes (NCA) region of Southern Peru. A climatology of the diurnal cycle is obtained from 15 wet seasons (2000-2014) of 3-hourly TRMM-3B42 data (0.25° × 0.25°) and swath data from the TRMM-2A25 precipitation radar product (5 km × 5 km). The main findings are: (1) in the NCA region, the diurnal cycle shows a maximum precipitation occurring during the day (night) in the western (eastern) side of the Andes highlands, (2) in the valleys of the Cuzco region and in the Amazon slope of the Andes the maximum (minimum) precipitation occurs during the night (day). The WRF (Weather Research and Forecasting) regional atmospheric model is used to simulate the mean diurnal cycle in the NCA region for the same period at 27 km and 9 km horizontal grid spacing and 3-hourly output, and at 3 km only for the month of January 2010 in the Cuzco valleys. Sensitivity experiments were also performed to investigate the effect of the topography on the observed rainfall patterns. The model reproduces the main diurnal precipitation features. The main atmospheric processes identified are: (1) the presence of a regional-scale cyclonic circulation strengthening during the afternoon, (2) diurnal thermally driven circulations at local scale, including upslope (downslope) wind and moisture transport during the day (night), (3) channelization of the upslope moisture transport from the Amazon along the Apurimac valleys toward the western part of the cordillera.

The anatomical relationships between the avian eye, orbit and sclerotic ring: implications for inferring activity patterns in extinct birds

PubMed Central

Hall, Margaret I

2008-01-01

Activity pattern, or the time of day when an animal is awake and active, is highly associated with that animal's ecology. There are two principal activity patterns: diurnal, or awake during the day in a photopic, or high light level, environment; and nocturnal, awake at night in scotopic, or low light level, conditions. Nocturnal and diurnal birds exhibit characteristic eye shapes associated with their activity pattern, with nocturnal bird eyes optimized for visual sensitivity with large corneal diameters relative to their eye axial lengths, and diurnal birds optimized for visual acuity, with larger axial lengths of the eye relative to their corneal diameters. The current study had three aims: (1) to quantify the nature of the relationship between the avian eye and its associated bony anatomy, the orbit and the sclerotic ring; (2) to investigate how activity pattern is reflected in that bony anatomy; and (3) to identify how much bony anatomy is required to interpret activity pattern reliably for a bird that does not have the soft tissue available for study, specifically, for a fossil. Knowledge of extinct avian activity patterns would be useful in making palaeoecological interpretations. Here eye, orbit and sclerotic ring morphologies of 140 nocturnal and diurnal bird species are analysed in a phylogenetic context. Although there is a close relationship between the avian eye and orbit, activity pattern can only be reliably interpreted for bony-only specimens, such as a fossil, that include both measurements of the sclerotic ring and orbit depth. Any missing data render the fossil analysis inaccurate, including fossil specimens that are flat and therefore do not have an orbit depth available. For example, activity pattern cannot be determined with confidence for Archaeopteryx lithographica, which has a complete sclerotic ring but no orbit depth measurement. Many of the bird fossils currently available that retain a good sclerotic ring tend to be flat specimens, while three-dimensionally preserved bird fossils tend not to have a well-preserved sclerotic ring or a well-defined optic foramen, necessary for delimiting the orbit depth. PMID:18510506

Preliminary assessment of the variability of UK offshore wind speed as a function of distance to the coast

NASA Astrophysics Data System (ADS)

Soler-Bientz, Rolando; Watson, Simon

2016-09-01

In the UK, there is an interest in the expected offshore wind resource given ambitious national plans to expand offshore capacity. There is also an increasing interest in alternative datasets to evaluate wind seasonal and inter-annual cycles which can be very useful in the initial stages of the design of wind farms in order to identify prospective areas where local measurements can then be applied to determine small-scale variations in the marine wind climate. In this paper we analyse both MERRA2 reanalysis data and measured offshore mast data to determine patterns in wind speed variation and how they change as a function of the distance from the coast. We also identify an empirical expression to estimate wind speed based on the distance from the coast. From the analysis, it was found that the variations of the seasonal cycles seem to be almost independent of the distance to the nearest shore and that they are an order of magnitude larger than the variations of the diurnal cycles. It was concluded that the diurnal variations decreased to less than a half for places located more than 100km from the nearest shore and that the data from the MERRA2 reanalysis grid points give an under-prediction of the average values of wind speed for both the diurnal and seasonal cycles. Finally, even though the two offshore masts were almost the same nearest distance from the coast and were geographically relatively close, they exhibited significantly different behaviour in terms of the strength of their diurnal and seasonal cycles which may be due to the distance from the coast for the prevailing wind direction being quite different for the two sites.

The role of the equivalent blackbody temperature in the study of Atlantic Ocean tropical cyclones

NASA Technical Reports Server (NTRS)

Steranka, J.; Rodgers, E. B.; Gentry, R. C.

1983-01-01

Satellite measured equivalent blackbody temperatures of Atlantic Ocean tropical cyclones are used to investigate their role in describing the convection and cloud patterns of the storms and in predicting wind intensity. The high temporal resolution of the equivalent blackbody temperature measurements afforded with the geosynchronous satellite provided sequential quantitative measurements of the tropical cyclone which reveal a diurnal pattern of convection at the inner core during the early developmental stage; a diurnal pattern of cloudiness in the storm's outer circulation throughout the life cycle; a semidiurnal pattern of cloudiness in the environmental atmosphere surrounding the storms during the weak storm stage; an outward modulating atmospheric wave originating at the inner core; and long term convective bursts at the inner core prior to wind intensification.

Seasonal and diurnal changes in starch content and sugar profiles of bermudagrass in the Piedmont region of the United States

USDA-ARS?s Scientific Manuscript database

Seasonal and diurnal patterns of sugar accumulation in bermudagrass (Cynodon dactylon) pastures were monitored in order to evaluate risk factors for pasture-associated laminitis of ponies and horses. Bermudagrass was collected in the morning and afternoon on a weekly basis, from mid-July until late...

Daily rhythms of behavioral and hormonal patterns in male dromedary camels housed in boxes

PubMed Central

Aubè, Lydiane; Fatnassi, Meriem; Monaco, Davide; Khorchani, Touhami; Lacalandra, Giovanni Michele; Hammadi, Mohamed

2017-01-01

Background Daily rhythmicity has been observed for a number of hormonal and behavioral variables in mammals. It can be entrained by several external factors, such as light-dark cycle and scheduled feeding. In dromedary camels, daily rhythmicity has been documented only for melatonin secretion and body temperature. In this study, the daily rhythmicity of behavioral repertoire, cortisol and testosterone levels was investigated in captive male camels. Methods Six clinically healthy male dromedary camels (Camelus dromedarius) were used. The animals were housed in single boxes for 24 h daily and fed twice a day. Over a period of 48 h, behavioral observations were made and blood samples taken every two hours. The data were analyzed using diurnality index, conisor analysis and PROC mixed procedure. Results The diurnality index for rumination and lying down was close to 0 (respectively, 0.09 and 0.19), while the indices for stereotypy, standing, feeding and walking were close to 1 (respectively, 0.74, 0.84, 0.92 and 0.85). Cosinor analysis revealed daily rhythmicity for all behaviors and for cortisol levels (acrophase at 12:57) but not for testosterone. Rumination and lying down (inactive behaviors) reached a peak during the scotophase, whereas feeding, walking and stereotypy (active behaviors) reached a peak during the photophase around midday. Cortisol level and expression of stereotypies peaked before and after food distribution and were negatively correlated (r =  − 0.287, P = 0.005). Testosterone levels and expression of sexual behaviors were stimulated by the visual and olfactory contacts with the females and were positively correlated (r = 0.164, P = 0.040). Testosterone was also negatively correlated with cortisol (r =  − 0.297; P = 0.003). Discussion These preliminary results provided new knowledge about the daily rhythm of behaviors in camels housed in boxes, suggesting that camels exhibit diurnal behavior pattern in the maintenance conditions outlined in the study. Daily rhythmicity seemed to be entrained not only by the light-dark cycle but also by scheduled feeding. The rise in stereotypy after food distribution could be due to the persistence of feeding motivation and frustration after the ingestion of food. Therefore, feeding practices should be improved to satisfy the foraging and feeding motivation of these camels. Behavioral and hormonal daily patterns in camels should be taken in consideration to adapt the management system, giving the animals more freedom during the light period and a diet richer in fiber, so as to improve reproductive performance, health and welfare. PMID:28367365

WNK-OSR1/SPAK-NCC signal cascade has circadian rhythm dependent on aldosterone.

PubMed

Susa, Koichiro; Sohara, Eisei; Isobe, Kiyoshi; Chiga, Motoko; Rai, Tatemitsu; Sasaki, Sei; Uchida, Shinichi

2012-11-02

Blood pressure and renal salt excretion show circadian rhythms. Recently, it has been clarified that clock genes regulate circadian rhythms of renal transporter expression in the kidney. Since we discovered the WNK-OSR1/SPAK-NaCl cotransporter (NCC) signal cascade, which is important for regulating salt balance and blood pressure, we have sought to determine whether NCC protein expression or phosphorylation shows diurnal rhythms in the mouse kidneys. Male C57BL/6J mice were sacrificed every 4h (at 20:00, 0:00, 4:00, 8:00, 12:00, and 16:00), and the expression and phosphorylation of WNK4, OSR1, SPAK, and NCC were determined by immunoblot. (Lights were turned on at 8:00, which was the start of the rest period, and turned off at 20:00, which was the start of the active period, since mice are nocturnal.) Although expression levels of each protein did not show diurnal rhythm, the phosphorylation levels of OSR1, SPAK, and NCC were increased around the start of the active period and decreased around the start of the rest period. Oral administration of eplerenone (10mg/day) attenuated the phosphorylation levels of these proteins and also diminished the diurnal rhythm of NCC phosphorylation. Thus, the activity of the WNK4-OSR1/SPAK-NCC cascade was shown to have a diurnal rhythm in the kidney that may be governed by aldosterone. Copyright © 2012 Elsevier Inc. All rights reserved.

The Impact of Complicated Grief on Diurnal Cortisol Levels Two Years After Loss: A Population-Based Study.

PubMed

Saavedra Pérez, Heidi C; Direk, Nese; Milic, Jelena; Ikram, Mohammed Arfan; Hofman, Albert; Tiemeier, Henning

2017-05-01

Few studies have focused on the effect of complicated grief-unresolved and prolonged grief-on the neuroendocrine systems. The present study examined the association of complicated grief and normal grief with the diurnal cortisol patterns in a large population-based study. This study was set in the Rotterdam Study and comprised 2084 persons aged older than 55 years (mean [SD] age, 64.9 [5.5] years). Participants were assessed with the Complicated Grief Inventory and classified into no grief (n = 1922), normal grief (n = 131), or complicated grief (n = 31) if they experienced the loss in the past 2 years. Saliva samples were collected to measure cortisol levels. Morning cortisol and summary measures (area under the curve and the slope) were studied to account for the diurnal pattern of cortisol. Persons with depressive disorders were excluded, and analyses were additionally adjusted for depressive symptoms. Compared to normal grievers, participants with complicated grief showed lower levels of morning cortisol (11.26 vs 15.51 nmol/L; difference, -4.24; 95% confidence interval [CI] = -7.87 to -0.62; p = .022), and lower levels of overall diurnal cortisol (6.89 vs 8.98 nmol/L; difference, -2.09; 95% CI = -3.81 to -0.37; p = .017). No difference was observed in slope between both groups. Participants with complicated grief also showed lower levels of morning cortisol than the nongrievers (11.26 vs 14.71; difference, -3.46; 95% CI = -6.78 to -0.13; p = .042). In contrast, cortisol secretion patterns did not differ between persons with normal grief and nongrieving controls. Participants with complicated grief showed low levels of morning cortisol and low overall diurnal cortisol levels characteristic for a chronic stress reaction.

Dim nighttime light impairs cognition and provokes depressive-like responses in a diurnal rodent.

PubMed

Fonken, Laura K; Kitsmiller, Emily; Smale, Laura; Nelson, Randy J

2012-08-01

Circadian disruption is a common by-product of modern life. Although jet lag and shift work are well-documented challenges to circadian organization, many more subtle environmental changes cause circadian disruption. For example, frequent fluctuations in the timing of the sleep/wake schedule, as well as exposure to nighttime lighting, likely affect the circadian system. Most studies of these effects have focused on nocturnal rodents, which are very different from diurnal species with respect to their patterns of light exposure and the effects that light can have on their activity. Thus, the authors investigated the effect of nighttime light on behavior and the brain of a diurnal rodent, the Nile grass rat. Following 3 weeks of exposure to standard light/dark (LD; 14:10 light [~150 lux] /dark [0 lux]) or dim light at night (dLAN; 14:10 light [~150 lux] /dim [5 lux]), rats underwent behavioral testing, and hippocampal neurons within CA1, CA3, and the dentate gyrus (DG) were examined. Three behavioral effects of dLAN were observed: (1) decreased preference for a sucrose solution, (2) increased latency to float in a forced swim test, and (3) impaired learning and memory in the Barnes maze. Light at night also reduced dendritic length in DG and basilar CA1 dendrites. Dendritic length in the DG positively correlated with sucrose consumption in the sucrose anhedonia task. Nighttime light exposure did not disrupt the pattern of circadian locomotor activity, and all grass rats maintained a diurnal activity pattern. Together, these data suggest that exposure to dLAN can alter affective responses and impair cognition in a diurnal animal.

Seasonal and spatial patterns in diurnal cycles in streamflow in the western United States

USGS Publications Warehouse

Lundquist, J.D.; Cayan, D.R.

2002-01-01

The diurnal cycle in streamflow constitutes a significant part of the variability in many rivers in the western United States and can be used to understand some of the dominant processes affecting the water balance of a given river basin. Rivers in which water is added diurnally, as in snowmelt, and rivers in which water is removed diurnally, as in evapotranspiration and infiltration, exhibit substantial differences in the timing, relative magnitude, and shape of their diurnal flow variations. Snowmelt-dominated rivers achieve their highest sustained flow and largest diurnal fluctuations during the spring melt season. These fluctuations are characterized by sharp rises and gradual declines in discharge each day. In large snowmelt-dominated basins, at the end of the melt season, the hour of maximum discharge shifts to later in the day as the snow line retreats to higher elevations. Many evapotranspiration/infiltration-dominated rivers in the western states achieve their highest sustained flows during the winter rainy season but exhibit their strongest diurnal cycles during summer months, when discharge is low, and the diurnal fluctuations compose a large percentage of the total flow. In contrast to snowmelt-dominated rivers, the maximum discharge in evapotranspiration/infiltration-dominated rivers occurs consistently in the morning throughout the summer. In these rivers, diurnal changes are characterized by a gradual rise and sharp decline each day.

Sleep Deprivation and Caffeine Treatment Potentiate Photic Resetting of the Master Circadian Clock in a Diurnal Rodent.

PubMed

Jha, Pawan Kumar; Bouâouda, Hanan; Gourmelen, Sylviane; Dumont, Stephanie; Fuchs, Fanny; Goumon, Yannick; Bourgin, Patrice; Kalsbeek, Andries; Challet, Etienne

2017-04-19

Circadian rhythms in nocturnal and diurnal mammals are primarily synchronized to local time by the light/dark cycle. However, nonphotic factors, such as behavioral arousal and metabolic cues, can also phase shift the master clock in the suprachiasmatic nuclei (SCNs) and/or reduce the synchronizing effects of light in nocturnal rodents. In diurnal rodents, the role of arousal or insufficient sleep in these functions is still poorly understood. In the present study, diurnal Sudanian grass rats, Arvicanthis ansorgei , were aroused at night by sleep deprivation (gentle handling) or caffeine treatment that both prevented sleep. Phase shifts of locomotor activity were analyzed in grass rats transferred from a light/dark cycle to constant darkness and aroused in early night or late night. Early night, but not late night, sleep deprivation induced a significant phase shift. Caffeine on its own induced no phase shifts. Both sleep deprivation and caffeine treatment potentiated light-induced phase delays and phase advances in response to a 30 min light pulse, respectively. Sleep deprivation in early night, but not late night, potentiated light-induced c-Fos expression in the ventral SCN. Caffeine treatment in midnight triggered c-Fos expression in dorsal SCN. Both sleep deprivation and caffeine treatment potentiated light-induced c-Fos expression in calbindin-containing cells of the ventral SCN in early and late night. These findings indicate that, in contrast to nocturnal rodents, behavioral arousal induced either by sleep deprivation or caffeine during the sleeping period potentiates light resetting of the master circadian clock in diurnal rodents, and activation of calbindin-containing suprachiasmatic cells may be involved in this effect. SIGNIFICANCE STATEMENT Arousing stimuli have the ability to regulate circadian rhythms in mammals. Behavioral arousal in the sleeping period phase shifts the master clock in the suprachiasmatic nuclei and/or slows down the photic entrainment in nocturnal animals. How these stimuli act in diurnal species remains to be established. Our study in a diurnal rodent, the Grass rat, indicates that sleep deprivation in the early rest period induces phase delays of circadian locomotor activity rhythm. Contrary to nocturnal rodents, both sleep deprivation and caffeine-induced arousal potentiate the photic entrainment in a diurnal rodent. Such enhanced light-induced circadian responses could be relevant for developing chronotherapeutic strategies. Copyright © 2017 the authors 0270-6474/17/374343-16$15.00/0.

Expression analysis of genes encoding double B-box zinc finger proteins in maize.

PubMed

Li, Wenlan; Wang, Jingchao; Sun, Qi; Li, Wencai; Yu, Yanli; Zhao, Meng; Meng, Zhaodong

2017-11-01

The B-box proteins play key roles in plant development. The double B-box (DBB) family is one of the subfamily of the B-box family, with two B-box domains and without a CCT domain. In this study, 12 maize double B-box genes (ZmDBBs) were identified through a genome-wide survey. Phylogenetic analysis of DBB proteins from maize, rice, Sorghum bicolor, Arabidopsis, and poplar classified them into five major clades. Gene duplication analysis indicated that segmental duplications made a large contribution to the expansion of ZmDBBs. Furthermore, a large number of cis-acting regulatory elements related to plant development, response to light and phytohormone were identified in the promoter regions of the ZmDBB genes. The expression patterns of the ZmDBB genes in various tissues and different developmental stages demonstrated that ZmDBBs might play essential roles in plant development, and some ZmDBB genes might have unique function in specific developmental stages. In addition, several ZmDBB genes showed diurnal expression pattern. The expression levels of some ZmDBB genes changed significantly under light/dark treatment conditions and phytohormone treatments, implying that they might participate in light signaling pathway and hormone signaling. Our results will provide new information to better understand the complexity of the DBB gene family in maize.

Cellular trade-offs and optimal resource allocation during cyanobacterial diurnal growth

PubMed Central

Knoop, Henning; Bockmayr, Alexander; Steuer, Ralf

2017-01-01

Cyanobacteria are an integral part of Earth’s biogeochemical cycles and a promising resource for the synthesis of renewable bioproducts from atmospheric CO2. Growth and metabolism of cyanobacteria are inherently tied to the diurnal rhythm of light availability. As yet, however, insight into the stoichiometric and energetic constraints of cyanobacterial diurnal growth is limited. Here, we develop a computational framework to investigate the optimal allocation of cellular resources during diurnal phototrophic growth using a genome-scale metabolic reconstruction of the cyanobacterium Synechococcus elongatus PCC 7942. We formulate phototrophic growth as an autocatalytic process and solve the resulting time-dependent resource allocation problem using constraint-based analysis. Based on a narrow and well-defined set of parameters, our approach results in an ab initio prediction of growth properties over a full diurnal cycle. The computational model allows us to study the optimality of metabolite partitioning during diurnal growth. The cyclic pattern of glycogen accumulation, an emergent property of the model, has timing characteristics that are in qualitative agreement with experimental findings. The approach presented here provides insight into the time-dependent resource allocation problem of phototrophic diurnal growth and may serve as a general framework to assess the optimality of metabolic strategies that evolved in phototrophic organisms under diurnal conditions. PMID:28720699

A numerical study of diurnally varying surface temperature on flow patterns and pollutant dispersion in street canyons

NASA Astrophysics Data System (ADS)

Tan, Zijing; Dong, Jingliang; Xiao, Yimin; Tu, Jiyuan

2015-03-01

The impacts of the diurnal variation of surface temperature on street canyon flow pattern and pollutant dispersion are investigated based on a two-dimensional street canyon model under different thermal stratifications. Uneven distributed street temperature conditions and a user-defined wall function representing the heat transfer between the air and the street canyon are integrated into the current numerical model. The prediction accuracy of this model is successfully validated against a published wind tunnel experiment. Then, a series of numerical simulations representing four time scenarios (Morning, Afternoon, Noon and Night) are performed at different Bulk Richardson number (Rb). The results demonstrate that uneven distributed street temperature conditions significantly alters street canyon flow structure and pollutant dispersion characteristics compared with conventional uniform street temperature assumption, especially for the morning event. Moreover, air flow patterns and pollutant dispersion are greatly influenced by diurnal variation of surface temperature under unstable stratification conditions. Furthermore, the residual pollutant in near-ground-zone decreases as Rb increases in noon, afternoon and night events under all studied stability conditions.

Airborne allergenic pollen in natural areas: Hornachuelos Natural Park, Cordoba, southern Spain.

PubMed

Garcia-Mozo, Herminia; Dominguez-Vilches, Eugenio; Galan, Carmen

2007-01-01

The present study shows the results of monitoring the atmospheric pollen in the atmosphere of an area of natural vegetation, the Hornachuelos Natural Park, Cordoba, southern Spain, during a six years (1998-2003). Special attention was paid in the seasonal and intra-diurnal characteristics of airborne allergenic pollen. During this period, 31 pollen types were described, some of them rare in aerobiological analysis. High concentrations of allergenic pollen from entomophilous species and from areas at a long distance were found. Significant differences between pollen spectrum and pollen concentration of the natural study area and the surrounding cities were detected. Intra-diurnal pattern from trees surrounding the trap presented a clear peak at midday/afternoon. Pollen from taxa comprising many species and from species at far locations showed a smoother intra-diurnal pattern. The correlation with meteorological parameters was positive with maximum and mean temperatures, and negative with humidity and rainfall.

Diurnal variation of surface ozone in mountainous areas: Case study of Mt. Huang, East China.

PubMed

Zhang, Lei; Jin, Lianji; Zhao, Tianliang; Yin, Yan; Zhu, Bin; Shan, Yunpeng; Guo, Xiaomei; Tan, Chenghao; Gao, Jinhui; Wang, Haoliang

2015-12-15

To explore the variations in atmospheric environment over mountainous areas, measurements were made from an intensive field observation at the summit of Mt. Huang (30.13°N, 118.15°E, 1841m above sea level), a rural site located in East China, from June to August 2011. The measurements revealed a diurnal change of surface O3 with low concentrations during the daytime and high concentrations during the nighttime. The causes of diurnal O3 variations over the mountain peak in East China were investigated by using a fairly comprehensive WRF-Chem and HYSPLIT4 modeling approach with observational analysis. By varying model inputs and comparing the results to a baseline modeling and actual air quality observations, it is found that nearby ozone urban/anthropogenic emission sources were contributing to a nighttime increase in mountaintop ozone levels due to a regional transport lag and residual layer effects. Positive correlation of measured O3 and CO concentrations suggested that O3 was associated with anthropogenic emissions. Sensitivity modeling experiments indicated that local anthropogenic emissions had little impact on the diurnal pattern of O3. The diurnal pattern of O3 was mainly influenced by regional O3 transport from the surrounding urban areas located 100-150km away from the summit, with a lag time of 10h for transport. Copyright © 2015 Elsevier B.V. All rights reserved.

[Diurnal and seasonal variations of surface atmospheric CO2 concentration in the river estuarine marsh].

PubMed

Zhang, Lin-Hai; Tong, Chuan; Zeng, Cong-Sheng

2014-03-01

Characteristics of diurnal and seasonal variations of surface atmospheric CO2 concentration were analyzed in the Minjiang River estuarine marsh from December 2011 to November 2012. The results revealed that both the diurnal and seasonal variation of surface atmospheric CO2 concentration showed single-peak patterns, with the valley in the daytime and the peak value at night for the diurnal variations, and the maxima in winter and minima in summer for the seasonal variation. Diurnal amplitude of CO2 concentration varied from 16.96 micromol x mol(-1) to 38.30 micromol x mol(-1). The seasonal averages of CO2 concentration in spring, summer, autumn and winter were (353.74 +/- 18.35), (327.28 +/- 8.58), (354.78 +/- 14.76) and (392.82 +/- 9.71) micromol x mol(-1), respectively, and the annual mean CO2 concentration was (357.16 +/- 26.89) micromol x mol(-1). The diurnal CO2 concentration of surface atmospheric was strongly negatively correlated with temperature, wind speed, photosynthetically active radiation and total solar radiation (P < 0.05). The diurnal concentration of CO2 was negatively related with tidal level in January, but significantly positively related in July.

Molecular mechanisms of foliar water uptake in a desert tree

PubMed Central

Yan, Xia; Zhou, Maoxian; Dong, Xicun; Zou, Songbing; Xiao, Honglang; Ma, Xiao-Fei

2015-01-01

Water deficits severely affect growth, particularly for the plants in arid and semiarid regions of the world. In addition to precipitation, other subsidiary water, such as dew, fog, clouds and small rain showers, may also be absorbed by leaves in a process known as foliar water uptake. With the severe scarcity of water in desert regions, this process is increasingly becoming a necessity. Studies have reported on physical and physiological processes of foliar water uptake. However, the molecular mechanisms remain less understood. As major channels for water regulation and transport, aquaporins (AQPs) are involved in this process. However, due to the regulatory complexity and functional diversity of AQPs, their molecular mechanism for foliar water uptake remains unclear. In this study, Tamarix ramosissima, a tree species widely distributed in desert regions, was investigated for gene expression patterns of AQPs and for sap flow velocity. Our results suggest that the foliar water uptake of T. ramosissima occurs in natural fields at night when the humidity is over a threshold of 85 %. The diurnal gene expression pattern of AQPs suggests that most AQP gene expressions display a circadian rhythm, and this could affect both photosynthesis and transpiration. At night, the PIP2-1 gene is also upregulated with increased relative air humidity. This gene expression pattern may allow desert plants to regulate foliar water uptake to adapt to extreme drought. This study suggests a molecular basis of foliar water uptake in desert plants. PMID:26567212

Molecular mechanisms of foliar water uptake in a desert tree.

PubMed

Yan, Xia; Zhou, Maoxian; Dong, Xicun; Zou, Songbing; Xiao, Honglang; Ma, Xiao-Fei

2015-11-12

Water deficits severely affect growth, particularly for the plants in arid and semiarid regions of the world. In addition to precipitation, other subsidiary water, such as dew, fog, clouds and small rain showers, may also be absorbed by leaves in a process known as foliar water uptake. With the severe scarcity of water in desert regions, this process is increasingly becoming a necessity. Studies have reported on physical and physiological processes of foliar water uptake. However, the molecular mechanisms remain less understood. As major channels for water regulation and transport, aquaporins (AQPs) are involved in this process. However, due to the regulatory complexity and functional diversity of AQPs, their molecular mechanism for foliar water uptake remains unclear. In this study, Tamarix ramosissima, a tree species widely distributed in desert regions, was investigated for gene expression patterns of AQPs and for sap flow velocity. Our results suggest that the foliar water uptake of T. ramosissima occurs in natural fields at night when the humidity is over a threshold of 85 %. The diurnal gene expression pattern of AQPs suggests that most AQP gene expressions display a circadian rhythm, and this could affect both photosynthesis and transpiration. At night, the PIP2-1 gene is also upregulated with increased relative air humidity. This gene expression pattern may allow desert plants to regulate foliar water uptake to adapt to extreme drought. This study suggests a molecular basis of foliar water uptake in desert plants. Published by Oxford University Press on behalf of the Annals of Botany Company.

Altered temporal patterns of anxiety in aged and amyloid precursor protein (APP) transgenic mice.

PubMed

Bedrosian, Tracy A; Herring, Kamillya L; Weil, Zachary M; Nelson, Randy J

2011-07-12

Both normal aging and dementia are associated with dysregulation of the biological clock, which contributes to disrupted circadian organization of physiology and behavior. Diminished circadian organization in conjunction with the loss of cholinergic input to the cortex likely contributes to impaired cognition and behavior. One especially notable and relatively common circadian disturbance among the aged is "sundowning syndrome," which is characterized by exacerbated anxiety, agitation, locomotor activity, and delirium during the hours before bedtime. Sundowning has been reported in both dementia patients and cognitively intact elderly individuals living in institutions; however, little is known about temporal patterns in anxiety and agitation, and the neurobiological basis of these rhythms remains unspecified. In the present study, we explored the diurnal pattern of anxiety-like behavior in aged and amyloid precursor protein (APP) transgenic mice. We then attempted to treat the observed behavioral disturbances in the aged mice using chronic nightly melatonin treatment. Finally, we tested the hypothesis that time-of-day differences in acetylcholinesterase and choline acetyltransferase expression and general neuronal activation (i.e., c-Fos expression) coincide with the behavioral symptoms. Our results show a temporal pattern of anxiety-like behavior that emerges in elderly mice. This behavioral pattern coincides with elevated locomotor activity relative to adult mice near the end of the dark phase, and with time-dependent changes in basal forebrain acetylcholinesterase expression. Transgenic APP mice show a similar behavioral phenomenon that is not observed among age-matched wild-type mice. These results may have useful applications to the study and treatment of age- and dementia-related circadian behavioral disturbances, namely, sundowning syndrome.

A review on the temporal pattern of deer-vehicle accidents: impact of seasonal, diurnal and lunar effects in cervids.

PubMed

Steiner, Wolfgang; Leisch, Friedrich; Hackländer, Klaus

2014-05-01

The increasing number of deer-vehicle-accidents (DVAs) and the resulting economic costs have promoted numerous studies on behavioural and environmental factors which may contribute to the quantity, spatiotemporal distribution and characteristics of DVAs. Contrary to the spatial pattern of DVAs, data of their temporal pattern is scarce and difficult to obtain because of insufficient accuracy in available datasets, missing standardization in data aquisition, legal terms and low reporting rates to authorities. Literature of deer-traffic collisions on roads and railways is reviewed to examine current understanding of DVA temporal trends. Seasonal, diurnal and lunar peak accident periods are identified for deer, although seasonal pattern are not consistent among and within species or regions and data on effects of lunar cycles on DVAs is almost non-existent. Cluster analysis of seasonal DVA data shows nine distinct clusters of different seasonal DVA pattern for cervid species within the reviewed literature. Studies analyzing the relationship between time-related traffic predictors and DVAs yield mixed results. Despite the seasonal dissimilarity, diurnal DVA pattern are comparatively constant in deer, resulting in pronounced DVA peaks during the hours of dusk and dawn frequently described as bimodal crepuscular pattern. Behavioural aspects in activity seem to have the highest impact in DVAs temporal trends. Differences and variations are related to habitat-, climatic- and traffic characteristics as well as effects of predation, hunting and disturbance. Knowledge of detailed temporal DVA pattern is essential for prevention management as well as for the application and evaluation of mitigation measures. Copyright © 2014 Elsevier Ltd. All rights reserved.

Crepuscular Behavioral Variation and Profiling of Opsin Genes in Anopheles gambiae and Anopheles stephensi (Diptera: Culicidae)

PubMed Central

Jenkins, Adam M.; Muskavitch, Marc A. T.

2015-01-01

We understand little about photopreference and the molecular mechanisms governing vision-dependent behavior in vector mosquitoes. Investigations of the influence of photopreference on adult mosquito behaviors such as endophagy and exophagy and endophily and exophily will enhance our ability to develop and deploy vector-targeted interventions and monitoring techniques. Our laboratory-based analyses have revealed that crepuscular period photopreference differs between An. gambiae and An. stephensi. We employed qRT-PCR to assess crepuscular transcriptional expression patterns of long wavelength-, short wavelength-, and ultraviolet wavelength-sensing opsins (i.e., rhodopsin-class G-protein coupled receptors) in An. gambiae and in An. stephensi. Transcript levels do not exhibit consistent differences between species across diurnal cycles, indicating that differences in transcript abundances within this gene set are not correlated with these behavioral differences. Using developmentally staged and gender-specific RNAseq data sets in An. gambiae, we show that long wavelength-sensing opsins are expressed in two different patterns (one set expressed during larval stages, and one set expressed during adult stages), while short wavelength- and ultraviolet wavelength-sensing opsins exhibit increased expression during adult stages. Genomic organization of An. gambiae opsins suggests paralogous gene expansion of long wavelength-sensing opsins in comparison with An. stephensi. We speculate that this difference in gene number may contribute to variation between these species in photopreference behavior (e.g., visual sensitivity). PMID:26334802

A Model for Interpreting High-Tower CO2 Concentration Records for the Surface Carbon Balance Information

NASA Astrophysics Data System (ADS)

Chen, B.; Chen, J. M.; Higuchi, K.; Chan, D.; Shashkov, A.

2002-05-01

Atmospheric CO2 concentration measurements have been made by scientists of Meteorological Service of Canada on a 40 m tower for the last 10 years at 15 minute intervals over a mostly intact boreal forest near Fraserdale (50N, 81W), Ontario, Canada. The long time records of CO2 as well as basic meteorological variables provide a unique opportunity to investigate any potential changes in the ecosystem in terms of carbon balance. A model is needed to decipher the carbon cycle signals from the diurnal and seasonal variation patterns in the CO2 record. For this purpose, the Boreal Ecosystem Productivity Simulator (BEPS) is expanded to include a one-dimensional CO2 vertical transfer model involving the interaction between plant canopies and the atmosphere in the surface layer and the diurnal dynamics of the mixed layer. An analytical solution of the scalar transfer equation within the surface layer is found using an assumption that the diurnal oscillation of CO2 concentration at a given height is sinusoidal, which is suitable for the investigation of the changes in diurnal variation pattern over the 10 year period. The complex interactions between the daily cycle of the atmosphere and vegetation CO2 exchange and the daily evolution of mixed layer entrainment of CO2 determines the CO2 variation pattern at a given height. The expanded BEPS can simulate within ñ2 ppm the hourly CO2 records at the 40 m measurement height. The annual totals of gross primary productivity (GPP), net primary productivity (NPP) and net ecosystem productivity (NEP), summed up from the hourly results, agree within 5% of previous estimates of BEPS at daily steps, indicating the internal consistency of the hourly model. The model is therefore ready for exploring changes in the CO2 record as affected by changes in the forest ecosystems upwind of the tower. Preliminary results indicate that the diurnal variation amplitude of CO2 has increased by 10-20% over the 10 years period, and this change can largely be attributed to enhanced growth of the forest. The uncertainties are large because the record is short relative to boreal carbon residence time. There is also a possibility of long-term changes in the mixed layer dynamics which affect the diurnal variation pattern at the measurement height.

Circadian regulation of intestinal lipid absorption by apolipoprotein AIV involves forkhead transcription factors A2 and O1 and microsomal triglyceride transfer protein.

PubMed

Pan, Xiaoyue; Munshi, Mohamed Khalid; Iqbal, Jahangir; Queiroz, Joyce; Sirwi, Alaa Ahmed; Shah, Shrenik; Younus, Abdullah; Hussain, M Mahmood

2013-07-12

We have shown previously that Clock, microsomal triglyceride transfer protein (MTP), and nocturnin are involved in the circadian regulation of intestinal lipid absorption. Here, we clarified the role of apolipoprotein AIV (apoAIV) in the diurnal regulation of plasma lipids and intestinal lipid absorption in mice. Plasma triglyceride in apoAIV(-/-) mice showed diurnal variations similar to apoAIV(+/+) mice; however, the increases in plasma triglyceride at night were significantly lower in these mice. ApoAIV(-/-) mice absorbed fewer lipids at night and showed blunted response to daytime feeding. To explain reasons for these lower responses, we measured MTP expression; intestinal MTP was low at night, and its induction after food entrainment was less in apoAIV(-/-) mice. Conversely, apoAIV overexpression increased MTP mRNA in hepatoma cells, indicating transcriptional regulation. Mechanistic studies revealed that sequences between -204/-775 bp in the MTP promoter respond to apoAIV and that apoAIV enhances expression of FoxA2 and FoxO1 transcription factors and their binding to the identified cis elements in the MTP promoter at night. Knockdown of FoxA2 and FoxO1 abolished apoAIV-mediated MTP induction. Similarly, knockdown of apoAIV in differentiated Caco-2 cells reduced MTP, FoxA2, and FoxO1 mRNA levels, cellular MTP activity, and media apoB. Moreover, FoxA2 and FoxO1 expression showed diurnal variations, and their expression was significantly lower in apoAIV(-/-) mice. These data indicate that apoAIV modulates diurnal changes in lipid absorption by regulating forkhead transcription factors and MTP and that inhibition of apoAIV expression might reduce plasma lipids.

The associations between diurnal cortisol patterns, self-perceived social support, and sleep behavior in Chinese breast cancer patients.

PubMed

Ho, Rainbow T H; Fong, Ted C T; Chan, Caitlin K P; Chan, Cecilia L W

2013-10-01

This study examined the relationships between diurnal cortisol patterns and sleep behavior, social support, psychological factors, and perceived health status in breast cancer patients. One hundred and eighty-one breast cancer patients completed a self-report questionnaire that combined the Hospital Anxiety and Depression Scale, the Yale Social Support Scale, and self-perceived measures of physical health, stress, sleep quality, total sleep hours, and time of awakening. Salivary cortisol was collected upon waking, at 1200h, 1700h, and 2100h on two consecutive days. Multiple regression analysis was performed on the diurnal cortisol slope that was derived from slope analysis of the log-transformed cortisol data. Controlling for the initial cortisol level, a flatter diurnal cortisol slope was significantly associated with a later time of awakening, higher negative social support, poorer perceived health, poorer sleep quality, and shorter total sleep hours. Anxiety and depression were not significantly correlated with the slope. The results indicate a subtle dysregulation in hypothalamic-pituitary-adrenal axis functioning in patients with highly negative social support, poor perceived health, poor sleep quality, a later time of awakening, and insufficient sleep hours. Copyright © 2013 Elsevier Ltd. All rights reserved.

Shift work parameters and disruption of diurnal cortisol production in female hospital employees.

PubMed

Hung, Eleanor Wai Man; Aronson, Kristan J; Leung, Michael; Day, Andrew; Tranmer, Joan

2016-01-01

Shift work is associated with an increased risk of cardiovascular diseases (CVD). Disruption of cortisol production is a potential underlying mechanism. This study explored the associations of diurnal quantity and pattern of cortisol production in relation to (1) current shift work status (exclusive day versus rotating days and nights), (2) years of past shift work and (3) parameters of rotating shift work (timing, length and intensity). Female hospital employees (160 day workers and 168 rotating shift workers) from southeastern Ontario, Canada, participated in a cross-sectional study. Participants completed a baseline questionnaire and measures of body height, weight, and waist circumference were taken. Midstream urine samples were collected over two separate 24-hour periods to measure creatinine-adjusted cortisol. Total diurnal cortisol production and pattern were described with two measures of the area under the curve. The effect of shift work on cortisol was modeled using multivariable linear regression analyses. Cortisol production in day workers and shift workers on their day shift were similar; however, shift workers on the night shift had flatter diurnal cortisol curves and produced less cortisol. This suggests that night work is associated with an acute attenuation of cortisol production.

Aging and the HPA axis: Stress and resilience in older adults

PubMed Central

Gaffey, Allison E.; Bergeman, C.S.; Clark, Lee Anna; Wirth, Michelle M.

2017-01-01

Hypothalamic-pituitary-adrenal (HPA) axis function may change over the course of aging, and altered diurnal or stress-induced secretion of the hormone cortisol could predispose older adults to negative health outcomes. We propose that psychological resilience may interact with diurnal cortisol to affect health outcomes later in life. Emotion regulation and social support are two constructs that contribute to resilience and exhibit age-specific patterns in older adults. Determining how the use of resilience resources interacts with age-related diurnal cortisol will improve our understanding of the pathways between stress, resilience, and well-being. In this review, we assess published studies evaluating diurnal cortisol in older adults to better understand differences in their HPA axis functioning. Evidence thus far suggests that diurnal cortisol may increase with age, although cross-sectional studies limit the conclusions that can be drawn. We also review extant evidence connecting age-specific signatures of emotion regulation and social support with diurnal cortisol. Conclusions are used to propose a preliminary model demonstrating how resilience resources may modulate the effects of cortisol on health in aging. PMID:27377692

A new expression for computing the bottomside thickness parameter and comparisons with the NeQuick and IRI-2012 models during declining phase of solar cycle 23 at equatorial latitude station, Chumphon, Thailand

NASA Astrophysics Data System (ADS)

Jamjareegulgarn, Punyawi; Supnithi, Pornchai; Watthanasangmechai, Kornyanat; Yokoyama, Tatsuhiro; Tsugawa, Takuya; Ishii, Mamoru

2017-07-01

This paper proposes a new expression for computing the bottomside thickness parameter at equatorial latitude station, Chumphon (10.72°N, 99.37°E), Thailand. Its diurnal variations from 2004 to 2006 at this location are then studied. The proposed expression is derived based on two experimental data sources: FMCW ionosonde and dual-frequency GPS system, and some expressions of the NeQuick 2 model. Hence, after both the bottomside thickness parameter computed by the proposed equation, B2bot_Pro, and the bottomside shape parameter (namely, B1_Pro in this work) are computed, the bottomside electron density and the height where the bottomside electron density drops down to be 24% of the NmF2 (namely, h0.24) can be computed and shown in this work using the analytical functions of the IRI model. Moreover, the diurnal variations of the B2bot_Pro are compared with those computed from the NeQuick model, B2bot_NeQ, and the predicted B0 of the IRI-2012 model with ABT-2009 and Bil-2000 options (namely, ;B0_ABT; and ;B0_Bil;, respectively). The averaged, minimum, and maximum values of percentage deviations among these bottomside thickness parameters are also computed and shown in this work. Our results show that the diurnal variations of B2bot_Pro at Chumphon station have the following patterns: they start to increase during nighttime to the first peaks during pre-sunrise hours, and then decrease abruptly to their minimum values during sunrise hours. Afterward, they increase again to reach the second peaks around local noontime and fall gradually to their starting times during 20-04 LT. The diurnal variations of B2bot_Pro follow generally the same trends as those of the B2bot_NeQ and the B0_ABT, except pre-sunrise hours. The pre-sunrise peaks and sunrise collapses in both the B2bot_NeQ and the B0_ABT can be found occasionally. On the other hand, the diurnal variations in B2bot_Pro differ from those in B0_Bil due to the flattened variation in B0_Bil and the pre-sunrise peaks as well as sunrise collapses in B0_Bil disappear. The pre-sunrise peaks of the B2bot_Pro at the Chumphon station are higher than those of the B2bot_NeQ, the B0_ABT, and the observed B0 at other regions. Furthermore, the percentage deviations between the B2bot_Pro and the B0_ABT (PD_B2B0ABT) are mostly lower than 30% for all seasons of the studied years, opposite to the other percentage deviations studied in this work. The proposed B2bot_Pro parameters in this work follow a similar trend to the B2bot_NeQ and the B0_ABT, but it is not conclusive that the proposed values are equivalent to them.

Diurnal pattern to insulin secretion and insulin action in healthy individuals.

PubMed

Saad, Ahmed; Dalla Man, Chiara; Nandy, Debashis K; Levine, James A; Bharucha, Adil E; Rizza, Robert A; Basu, Rita; Carter, Rickey E; Cobelli, Claudio; Kudva, Yogish C; Basu, Ananda

2012-11-01

Evaluation of the existence of a diurnal pattern of glucose tolerance after mixed meals is important to inform a closed-loop system of treatment for insulin requiring diabetes. We studied 20 healthy volunteers with normal fasting glucose (4.8 ± 0.1 mmol/L) and HbA(1c) (5.2 ± 0.0%) to determine such a pattern in nondiabetic individuals. Identical mixed meals were ingested during breakfast, lunch, or dinner at 0700, 1300, and 1900 h in randomized Latin square order on 3 consecutive days. Physical activity was the same on all days. Postprandial glucose turnover was measured using the triple tracer technique. Postprandial glucose excursion was significantly lower (P < 0.01) at breakfast than lunch and dinner. β-Cell responsivity to glucose and disposition index was higher (P < 0.01) at breakfast than lunch and dinner. Hepatic insulin extraction was lower (P < 0.01) at breakfast than dinner. Although meal glucose appearance did not differ between meals, suppression of endogenous glucose production tended to be lower (P < 0.01) and insulin sensitivity tended to be higher (P < 0.01) at breakfast than at lunch or dinner. Our results suggest a diurnal pattern to glucose tolerance in healthy humans, and if present in type 1 diabetes, it will need to be incorporated into artificial pancreas systems.

Diurnal influences on electrophysiological oscillations and coupling in the dorsal striatum and cerebellar cortex of the anesthetized rat

PubMed Central

Frederick, Ariana; Bourget-Murray, Jonathan; Chapman, C. Andrew; Amir, Shimon; Courtemanche, Richard

2014-01-01

Circadian rhythms modulate behavioral processes over a 24 h period through clock gene expression. What is largely unknown is how these molecular influences shape neural activity in different brain areas. The clock gene Per2 is rhythmically expressed in the striatum and the cerebellum and its expression is linked with daily fluctuations in extracellular dopamine levels and D2 receptor activity. Electrophysiologically, dopamine depletion enhances striatal local field potential (LFP) oscillations. We investigated if LFP oscillations and synchrony were influenced by time of day, potentially via dopamine mechanisms. To assess the presence of a diurnal effect, oscillatory power and coherence were examined in the striatum and cerebellum of rats under urethane anesthesia at four different times of day zeitgeber time (ZT1, 7, 13 and 19—indicating number of hours after lights turned on in a 12:12 h light-dark cycle). We also investigated the diurnal response to systemic raclopride, a D2 receptor antagonist. Time of day affected the proportion of LFP oscillations within the 0–3 Hz band and the 3–8 Hz band. In both the striatum and the cerebellum, slow oscillations were strongest at ZT1 and weakest at ZT13. A 3–8 Hz oscillation was present when the slow oscillation was lowest, with peak 3–8 Hz activity occurring at ZT13. Raclopride enhanced the slow oscillations, and had the greatest effect at ZT13. Within the striatum and with the cerebellum, 0–3 Hz coherence was greatest at ZT1, when the slow oscillations were strongest. Coherence was also affected the most by raclopride at ZT13. Our results suggest that neural oscillations in the cerebellum and striatum, and the synchrony between these areas, are modulated by time of day, and that these changes are influenced by dopamine manipulation. This may provide insight into how circadian gene transcription patterns influence network electrophysiology. Future experiments will address how these network alterations are linked with behavior. PMID:25309348

Polymorphisms in the circadian expressed genes PER3 and ARNTL2 are associated with diurnal preference and GNβ3 with sleep measures

PubMed Central

Parsons, Michael J; Lester, Kathryn J; Barclay, Nicola L; Archer, Simon N; Nolan, Patrick M; Eley, Thalia C; Gregory, Alice M

2014-01-01

Sleep and circadian rhythms are intrinsically linked, with several sleep traits, including sleep timing and duration, influenced by both sleep homeostasis and the circadian phase. Genetic variation in several circadian genes has been associated with diurnal preference (preference in timing of sleep), although there has been limited research on whether they are associated with other sleep measurements. We investigated whether these genetic variations were associated with diurnal preference (Morningness–Eveningness Questionnaire) and various sleep measures, including: the global Pittsburgh Sleep Quality index score; sleep duration; and sleep latency and sleep quality. We genotyped 10 polymorphisms in genes with circadian expression in participants from the G1219 sample (n = 966), a British longitudinal population sample of young adults. We conducted linear regressions using dominant, additive and recessive models of inheritance to test for associations between these polymorphisms and the sleep measures. We found a significant association between diurnal preference and a polymorphism in period homologue 3 (PER3) (P < 0.005, recessive model) and a novel nominally significant association between diurnal preference and a polymorphism in aryl hydrocarbon receptor nuclear translocator-like 2 (ARNTL2) (P < 0.05, additive model). We found that a polymorphism in guanine nucleotide binding protein beta 3 (GNβ3) was associated significantly with global sleep quality (P < 0.005, recessive model), and that a rare polymorphism in period homologue 2 (PER2) was associated significantly with both sleep duration and quality (P < 0.0005, recessive model). These findings suggest that genes with circadian expression may play a role in regulating both the circadian clock and sleep homeostasis, and highlight the importance of further studies aimed at dissecting the specific roles that circadian genes play in these two interrelated but unique behaviours. PMID:24635757

A statistical model of diurnal variation in human growth hormone

NASA Technical Reports Server (NTRS)

Klerman, Elizabeth B.; Adler, Gail K.; Jin, Moonsoo; Maliszewski, Anne M.; Brown, Emery N.

2003-01-01

The diurnal pattern of growth hormone (GH) serum levels depends on the frequency and amplitude of GH secretory events, the kinetics of GH infusion into and clearance from the circulation, and the feedback of GH on its secretion. We present a two-dimensional linear differential equation model based on these physiological principles to describe GH diurnal patterns. The model characterizes the onset times of the secretory events, the secretory event amplitudes, as well as the infusion, clearance, and feedback half-lives of GH. We illustrate the model by using maximum likelihood methods to fit it to GH measurements collected in 12 normal, healthy women during 8 h of scheduled sleep and a 16-h circadian constant-routine protocol. We assess the importance of the model components by using parameter standard error estimates and Akaike's Information Criterion. During sleep, both the median infusion and clearance half-life estimates were 13.8 min, and the median number of secretory events was 2. During the constant routine, the median infusion half-life estimate was 12.6 min, the median clearance half-life estimate was 11.7 min, and the median number of secretory events was 5. The infusion and clearance half-life estimates and the number of secretory events are consistent with current published reports. Our model gave an excellent fit to each GH data series. Our analysis paradigm suggests an approach to decomposing GH diurnal patterns that can be used to characterize the physiological properties of this hormone under normal and pathological conditions.

Association of eating behaviours with diurnal preference and rotating shift work in Japanese female nurses: a cross-sectional study

PubMed Central

Yoshizaki, Takahiro; Kawano, Yukari; Noguchi, Osamu; Onishi, Junko; Teramoto, Reiko; Sunami, Ayaka; Yokoyama, Yuri; Tada, Yuki; Hida, Azumi; Togo, Fumiharu

2016-01-01

Objectives Our study examines differences in eating behaviour between day workers and rotating shift workers, and considers whether diurnal preference could explain the differences. Methods Japanese female nurses were studied (39 day workers and 123 rotating shift workers, aged 21–63 years) using self-administered questionnaires. The questionnaires assessed eating behaviours, diurnal preference and demographic characteristics. The questionnaire in the Guidelines for the management of obesity disease issued by the Japan Society for the Study of Obesity was used to obtain scores for the levels of obesity-related eating behaviours, including cognition of constitution, motivation for eating, eating as a diversion, feeling of satiety, eating style, meal contents and temporal eating patterns. The Japanese version of the Morningness–Eveningness (ME) questionnaire was used to measure self-rated preference for the degree to which people prefer to be active in the morning or the evening (ME). Results The scores for meal contents and temporal eating patterns in rotating shift workers were significantly higher than those in day workers. The ME score of rotating shift workers was significantly lower, indicating greater eveningness/less morningness among rotating shift workers. Multivariate linear regression revealed that the ME score was significantly negatively associated with temporal eating patterns and showed a negative association with the score for meal contents at a trend level, while current work shift was not significantly correlated with the scores. Conclusions These results suggest that eating behaviours for rotating shift workers are associated with a more unbalanced diet and abnormal temporal eating patterns and that the associations may be explained by diurnal preference rather than by rotating shift work. PMID:27895063

Diurnal blood pressure variations are associated with changes in distal-proximal skin temperature gradient.

PubMed

Kräuchi, Kurt; Gompper, Britta; Hauenstein, Daniela; Flammer, Josef; Pflüger, Marlon; Studerus, Erich; Schötzau, Andy; Orgül, Selim

2012-11-01

It is generally assumed that skin vascular resistance contributes only to a small extent to total peripheral resistance and hence to blood pressure (BP). However, little is known about the impact of skin blood flow (SBF) changes on the diurnal variations of BP under ambulatory conditions. The main aim of the study was to determine whether diurnal patterns of distal SBF are related to mean arterial BP (MAP). Twenty-four-hour ambulatory measurements of BP, heart rate (HR) and distal (mean of hands and feet) as well as proximal (mean of sternum and infraclavicular region) skin temperatures were carried out in 51 patients (men/women = 18/33) during a 2-d eye hospital investigation. The standardized ambulatory protocol allowed measurements with minimal interference from uncontrolled parameters and, hence, some conclusive interpretations. The distal minus proximal skin temperature gradient (DPG) provided a measure for distal SBF. Individual cross-correlation analyses revealed that the diurnal pattern of MAP was nearly a mirror image of DPG and hence of distal SBF. Scheduled lunch and dinner induced an increase in DPG and a decline in MAP, while HR increased. Low daytime DPG (i.e. low distal SBF) levels significantly predicted sleep-induced BP dipping (r = -.436, p = .0014). Preliminary path analysis suggested that outdoor air temperature and atmospheric pressure may act on MAP via changed distal SBF. Changes in distal SBF may contribute to diurnal variation in MAP, including sleep-induced BP dipping and changes related to food intake. This finding might have an impact on individual cardiovascular risk prediction with respect to diurnal, seasonal and weather variations; however, the underlying mechanisms remain to be discovered.

Nocturnal activity patterns of northern myotis (Myotis septentrionalis) during the maternity season in West Virginia (USA)

USGS Publications Warehouse

Johnson, J.B.; Edwards, J.W.; Ford, W.M.

2011-01-01

Nocturnal activity patterns of northern myotis (Myotis septentrionalis) at diurnal roost trees remain largely uninvestigated. For example, the influence of reproductive status, weather, and roost tree and surrounding habitat characteristics on timing of emergence, intra-night activity, and entrance at their roost trees is poorly known. We examined nocturnal activity patterns of northern myotis maternity colonies during pregnancy and lactation at diurnal roost trees situated in areas that were and were not subjected to recent prescribed fires at the Fernow Experimental Forest, West Virginia from 2007 to 2009. According to exit counts and acoustic data, northern myotis colony sizes were similar between reproductive periods and roost tree settings. However, intra-night activity patterns differed slightly between reproductive periods and roost trees in burned and non-burned areas. Weather variables poorly explained variation in activity patterns during pregnancy, but precipitation and temperature were negatively associated with activity patterns during lactation. ?? Museum and Institute of Zoology PAS.

Midday Depression vs. Midday Peak in Diurnal Light Interception: Contrasting Patterns at Crown and Leaf Scales in a Tropical Evergreen Tree.

PubMed

Ventre-Lespiaucq, Agustina; Flanagan, Nicola S; Ospina-Calderón, Nhora H; Delgado, Juan A; Escudero, Adrián

2018-01-01

Crown architecture usually is heterogeneous as a result of foraging in spatially and temporally heterogeneous light environments. Ecologists are only beginning to identify the importance of temporal heterogeneity for light acquisition in plants, especially at the diurnal scale. Crown architectural heterogeneity often leads to a diurnal variation in light interception. However, maximizing light interception during midday may not be an optimal strategy in environments with excess light. Instead, long-lived plants are expected to show crown architectures and leaf positions that meet the contrasting needs of light interception and avoidance of excess light on a diurnal basis. We expected a midday depression in the diurnal course of light interception both at the whole-crown and leaf scales, as a strategy to avoid the interception of excessive irradiance. We tested this hypothesis in a population of guava trees ( Psidium guajava L.) growing in an open tropical grassland. We quantified three crown architectural traits: intra-individual heterogeneity in foliage clumping, crown openness, and leaf position angles. We estimated the diurnal course of light interception at the crown scale using hemispheric photographs, and at the leaf scale using the cosine of solar incidence. Crowns showed a midday depression in light interception, while leaves showed a midday peak. These contrasting patterns were related to architectural traits. At the crown scale, the midday depression of light interception was linked to a greater crown openness and foliage clumping in crown tops than in the lateral parts of the crown. At the leaf scale, an average inclination angle of 45° led to the midday peak in light interception, but with a huge among-leaf variation in position angles. The mismatch in diurnal course of light interception at crown and leaf scales can indicate that different processes are being optimized at each scale. These findings suggest that the diurnal course of light interception may be an important dimension of the resource acquisition strategies of long-lived woody plants. Using a temporal approach as the one applied here may improve our understanding of the diversity of crown architectures found across and within environments.

Diurnal Human Activity and Introduced Species Affect Occurrence of Carnivores in a Human-Dominated Landscape.

PubMed

Moreira-Arce, Dario; Vergara, Pablo M; Boutin, Stan

2015-01-01

Diurnal human activity and domestic dogs in agro-forestry mosaics should theoretically modify the diurnal habitat use patterns of native carnivores, with these effects being scale-dependent. We combined intensive camera trapping data with Bayesian occurrence probability models to evaluate both diurnal and nocturnal patterns of space use by carnivores in a mosaic of land-use types in southern Chile. A total of eight carnivores species were recorded, including human-introduced dogs. During the day the most frequently detected species were the culpeo fox and the cougar. Conversely, during the night, the kodkod and chilla fox were the most detected species. The best supported models showed that native carnivores responded differently to landscape attributes and dogs depending on both the time of day as well as the spatial scale of landscape attributes. The positive effect of native forest cover at 250 m and 500 m radius buffers was stronger during the night for the Darwin's fox and cougar. Road density at 250 m scale negatively affected the diurnal occurrence of Darwin´s fox, whereas at 500 m scale roads had a stronger negative effect on the diurnal occurrence of Darwin´s foxes and cougars. A positive effect of road density on dog occurrence was evidenced during both night and day. Patch size had a positive effect on cougar occurrence during night whereas it affected negatively the occurrence of culpeo foxes and skunks during day. Dog occurrence had a negative effect on Darwin's fox occurrence during day-time and night-time, whereas its negative effect on the occurrence of cougar was evidenced only during day-time. Carnivore occurrences were not influenced by the proximity to a conservation area. Our results provided support for the hypothesis that diurnal changes to carnivore occurrence were associated with human and dog activity. Landscape planning in our study area should be focused in reducing both the levels of diurnal human activity in native forest remnants and the dispersion rates of dogs into these habitats.

Midday Depression vs. Midday Peak in Diurnal Light Interception: Contrasting Patterns at Crown and Leaf Scales in a Tropical Evergreen Tree

PubMed Central

Ventre-Lespiaucq, Agustina; Flanagan, Nicola S.; Ospina-Calderón, Nhora H.; Delgado, Juan A.; Escudero, Adrián

2018-01-01

Crown architecture usually is heterogeneous as a result of foraging in spatially and temporally heterogeneous light environments. Ecologists are only beginning to identify the importance of temporal heterogeneity for light acquisition in plants, especially at the diurnal scale. Crown architectural heterogeneity often leads to a diurnal variation in light interception. However, maximizing light interception during midday may not be an optimal strategy in environments with excess light. Instead, long-lived plants are expected to show crown architectures and leaf positions that meet the contrasting needs of light interception and avoidance of excess light on a diurnal basis. We expected a midday depression in the diurnal course of light interception both at the whole-crown and leaf scales, as a strategy to avoid the interception of excessive irradiance. We tested this hypothesis in a population of guava trees (Psidium guajava L.) growing in an open tropical grassland. We quantified three crown architectural traits: intra-individual heterogeneity in foliage clumping, crown openness, and leaf position angles. We estimated the diurnal course of light interception at the crown scale using hemispheric photographs, and at the leaf scale using the cosine of solar incidence. Crowns showed a midday depression in light interception, while leaves showed a midday peak. These contrasting patterns were related to architectural traits. At the crown scale, the midday depression of light interception was linked to a greater crown openness and foliage clumping in crown tops than in the lateral parts of the crown. At the leaf scale, an average inclination angle of 45° led to the midday peak in light interception, but with a huge among-leaf variation in position angles. The mismatch in diurnal course of light interception at crown and leaf scales can indicate that different processes are being optimized at each scale. These findings suggest that the diurnal course of light interception may be an important dimension of the resource acquisition strategies of long-lived woody plants. Using a temporal approach as the one applied here may improve our understanding of the diversity of crown architectures found across and within environments. PMID:29904391

Estimation of seasonal diurnal variations in primary and secondary organic carbon concentrations in the urban atmosphere: EC tracer and multiple regression approaches

NASA Astrophysics Data System (ADS)

Kim, Woogyung; Lee, Hanlim; Kim, Jhoon; Jeong, Ukkyo; Kweon, Jung

2012-09-01

In order to investigate seasonal and diurnal variation of primary organic carbon (POC) and secondary organic carbon (SOC) concentrations in a megacity, hourly measurements of particulate and gaseous pollutants were carried out in Seoul from January to December 2010. The EC Tracer Method (ECTM) and the Multiple Regression Method (MRM) have been used to estimate seasonal and diurnal concentrations of POC and SOC concentrations. Annual mean SOC concentrations estimated by ECTM (SOCECTM) and MRM (SOCMRM) accounted for 14.61 and 17.21% of TOC concentrations, respectively. Seasonal patterns in SOCMRM were comparable to those of SOCECTM, but the annual average SOCMRM was about 15% greater than that of SOCECTM. In spring, however, a large discrepancy was observed between SOCECTM and SOCMRM, which is thought to be due to a high ozone concentration and primary TOC/EC ratio. Regarding the annual mean diurnal characteristics, POC concentration showed peaks around 10:00 and 00:00 local time that were also observed in diurnal variations of TOC and EC concentrations. Annual mean SOC concentration, however, showed peaks at around 15:00. In the morning over all seasons, we found discrepancies between SOCECTM and SOCMRM due to overestimated SOCECTM concentration. The diurnal variations in SOC concentrations were found to have seasonal characteristics. The diurnal pattern of SOC concentration in spring was similar to that in autumn, and SOC concentrations in all seasons with the exception of winter showed a peak at around 15:00. In summer, however, the SOC concentration peak at around 15:00 was greater by 70%, 81%, and 54% than the peaks seen in spring, autumn, and winter, respectively, which could be explained by the high ozone concentration and strong UV radiation in summer. From 10:00 to 15:00 in summer, the average increase rates in SOCECTM and SOCMRM were 0.39 and 0.24 μg m-3 h-1, respectively. In winter, negligible diurnal variations of estimated SOC concentrations demonstrate that SOC formation is less active than in other seasons. The high concentration level of mean SOC in winter could be attributed to a low mixing height or stagnant atmospheric condition.

Diurnal Human Activity and Introduced Species Affect Occurrence of Carnivores in a Human-Dominated Landscape

PubMed Central

Moreira-Arce, Dario; Vergara, Pablo M.; Boutin, Stan

2015-01-01

Diurnal human activity and domestic dogs in agro-forestry mosaics should theoretically modify the diurnal habitat use patterns of native carnivores, with these effects being scale-dependent. We combined intensive camera trapping data with Bayesian occurrence probability models to evaluate both diurnal and nocturnal patterns of space use by carnivores in a mosaic of land-use types in southern Chile. A total of eight carnivores species were recorded, including human-introduced dogs. During the day the most frequently detected species were the culpeo fox and the cougar. Conversely, during the night, the kodkod and chilla fox were the most detected species. The best supported models showed that native carnivores responded differently to landscape attributes and dogs depending on both the time of day as well as the spatial scale of landscape attributes. The positive effect of native forest cover at 250m and 500 m radius buffers was stronger during the night for the Darwin's fox and cougar. Road density at 250m scale negatively affected the diurnal occurrence of Darwin´s fox, whereas at 500m scale roads had a stronger negative effect on the diurnal occurrence of Darwin´s foxes and cougars. A positive effect of road density on dog occurrence was evidenced during both night and day. Patch size had a positive effect on cougar occurrence during night whereas it affected negatively the occurrence of culpeo foxes and skunks during day. Dog occurrence had a negative effect on Darwin's fox occurrence during day-time and night-time, whereas its negative effect on the occurrence of cougar was evidenced only during day-time. Carnivore occurrences were not influenced by the proximity to a conservation area. Our results provided support for the hypothesis that diurnal changes to carnivore occurrence were associated with human and dog activity. Landscape planning in our study area should be focused in reducing both the levels of diurnal human activity in native forest remnants and the dispersion rates of dogs into these habitats. PMID:26368395

Diminished circadian rhythms in hippocampal microglia may contribute to age-related neuroinflammatory sensitization

PubMed Central

Fonken, Laura K.; Kitt, Meagan M.; Gaudet, Andrew D.; Barrientos, Ruth M.; Watkins, Linda R.; Maier, Steven F.

2016-01-01

Aged animals exhibit diminished circadian rhythms, and both aging and circadian disruption sensitize neuroinflammatory responses. Microglia –the innate immune cell of the CNS – possess endogenous timekeeping mechanisms that regulate immune responses. Here, we explored whether aging is associated with disrupted diurnal rhythms in microglia and neuroinflammatory processes. First, hippocampal microglia isolated from young rats (4 mos. F344XBN) rhythmically expressed circadian clock genes, whereas microglia isolated from the hippocampus of aged rats (25 mos.) had aberrant Per1 and Per2 rhythms. Unstimulated microglia from young rats exhibited robust rhythms of TNFα and IL-1β mRNA expression, whereas those from aged rats had flattened and tonically-elevated cytokine expression. Similarly, microglial activation markers were diurnally regulated in the hippocampus of young but not aged rats and diurnal differences in responsiveness to both ex vivo and in vivo inflammatory challenges were abolished in aged rats. Corticosterone is an entraining signal for extra-SCN circadian rhythms. Here, corticosterone stimulation elicited similar Per1 induction in aged and young microglia. Overall, these results indicate that aging dysregulates circadian regulation of neuroinflammatory functions. PMID:27568094

The effect of the lunar cycle on fecal cortisol metabolite levels and foraging ecology of nocturnally and diurnally active spiny mice.

PubMed

Gutman, Roee; Dayan, Tamar; Levy, Ofir; Schubert, Iris; Kronfeld-Schor, Noga

2011-01-01

We studied stress hormones and foraging of nocturnal Acomys cahirinus and diurnal A. russatus in field populations as well as in two field enclosures populated by both species and two field enclosures with individuals of A. russatus alone. When alone, A. russatus individuals become also nocturnally active. We asked whether nocturnally active A. russatus will respond to moon phase and whether this response will be obtained also in diurnally active individuals. We studied giving-up densities (GUDs) in artificial foraging patches and fecal cortisol metabolite levels. Both species exhibited elevated fecal cortisol metabolite levels and foraged to higher GUDs in full moon nights; thus A. russatus retains physiological response and behavioral patterns that correlate with full moon conditions, as can be expected in nocturnal rodents, in spite of its diurnal activity. The endocrinological and behavioral response of this diurnal species to moon phase reflects its evolutionary heritage.

Diurnal variations of aerosol characteristics at a rural measuring site close to the Ruhr-Area, Germany

NASA Astrophysics Data System (ADS)

Kuhlbusch, T. A. J.; John, A. C.; Fissan, H.

PM10, PM2.5, and Black Carbon (BC) mass concentrations as well as number size distributions were measured quasi-online at a rural sampling site from 18 September to 17 October 1997. Average PM10, PM2.5, and BC mass concentrations were 37 ± 25, 25 ± 23, and 2 ± 1 μgm -3, respectively. All determined aerosol characteristics showed significant diurnal variations with generally higher concentrations during daytime compared to nights. Maxima in mass concentrations were around 11 AM and 8 PM during weekdays, most likely caused by commuter traffic. Decreased mass concentrations, changes in chemical composition and size distribution have been observed for the time from 12 to 5 PM. Diurnal variations of the BC/PM2.5 mass ratio revealed a minimum between 12 and 4 PM. The ratio of particle volume (0.5-2.5 μm) to particle mass (PM2.5) called 'potential density' also showed significant diurnal changes. These changes could be attributed to increasing in mixing height and windspeed. The determined diurnal variations in particle mass, composition, and size distribution may be relevant for epidemiological studies. We propose that diurnally weighted averages of relevant aerosol characteristics, which take diurnal patterns of human activities into account, should be used in epidemiological studies.

Salivary alpha amylase diurnal pattern and stress response are associated with body mass index in low-income preschool-aged children.

PubMed

Miller, Alison L; Sturza, Julie; Rosenblum, Katherine; Vazquez, Delia M; Kaciroti, Niko; Lumeng, Julie C

2015-03-01

Physiological stress responses are proposed as a pathway through which stress can "get under the skin" and lead to health problems, specifically obesity. We tested associations of salivary alpha amylase (sAA) diurnal patterns and stress responses with body mass index (BMI) in young, low-income children (51% male; 54% non-Hispanic white). Diurnal saliva samples were collected three times per day across three days for 269 children (M age 50.8 months, SD 6.3). Individual sAA intercept and slope values were calculated using random effect models to represent morning sAA levels and rate of sAA change across the day. A subset of children (n=195; M age 56.6 months, SD 6.9) participated in a lab-based behavioral stress protocol. Area under the curve increase (AUCI) across four timepoints was calculated to represent increase in sAA output during stress elicitation. Children were weighed and height measured and BMI z-score was calculated. Linear regression was used to evaluate associations of sAA intercept, sAA slope, and sAA AUCI with BMI z-score, controlling for child age, sex, and race/ethnicity; maternal weight status; and family income-to-needs ratio. Diurnal and stress-response sAA patterns were related to child adiposity: for each 1-standard deviation unit (SDU) decrease in morning sAA level, the child's BMI z-score increased by 0.11 (SE 0.05) SDU's (p<.04); for each 1-SDU increase in sAA slope across the day, the child's BMI z-score increased by 0.12 (SE 0.05) SDU's (p<.03); and for each 1-SDU decrease in sAA AUCI during the stress elicitation, the child's BMI z-score increased by 0.14 (SE 0.06) SDU's (p<.03). Blunted stress responses and atypical diurnal patterns of sAA have been found following exposure to chronic life stressors such as poverty. Findings suggest that associations of stress, sAA, and elevated body mass index may develop very early in the lifespan. Copyright © 2014 Elsevier Ltd. All rights reserved.

A stochastic differential equation model of diurnal cortisol patterns

NASA Technical Reports Server (NTRS)

Brown, E. N.; Meehan, P. M.; Dempster, A. P.

2001-01-01

Circadian modulation of episodic bursts is recognized as the normal physiological pattern of diurnal variation in plasma cortisol levels. The primary physiological factors underlying these diurnal patterns are the ultradian timing of secretory events, circadian modulation of the amplitude of secretory events, infusion of the hormone from the adrenal gland into the plasma, and clearance of the hormone from the plasma by the liver. Each measured plasma cortisol level has an error arising from the cortisol immunoassay. We demonstrate that all of these three physiological principles can be succinctly summarized in a single stochastic differential equation plus measurement error model and show that physiologically consistent ranges of the model parameters can be determined from published reports. We summarize the model parameters in terms of the multivariate Gaussian probability density and establish the plausibility of the model with a series of simulation studies. Our framework makes possible a sensitivity analysis in which all model parameters are allowed to vary simultaneously. The model offers an approach for simultaneously representing cortisol's ultradian, circadian, and kinetic properties. Our modeling paradigm provides a framework for simulation studies and data analysis that should be readily adaptable to the analysis of other endocrine hormone systems.

The Influence of Obliquity on Europan Cycloid Formation

NASA Technical Reports Server (NTRS)

Hurford, T. a.; Sarid, A. R.; Greenberg, R.; Bills, B. G.

2009-01-01

Tectonic patterns on Europa are influenced by tidal stress. An important well-organized component is associated with the orbital eccentricity, which produces a diurnally varying stress as Jupiter's apparent position in Europa's sky oscillates in longitude. Cycloidal lineaments seem to have formed as cracks propagated in this diurnally varying stress field. Maps of theoretical cycloid patterns capture many of the characteristics of the observed distribution on Europa. However, a few details of the observed cycloids distribution have not reproduced by previous models. Recently, it has been shown that Europa has a finite forced obliquity, so Jupiter's apparent positon in Europa's sky will also oscillate in latitude. We explore this new type of diurnal effect on cycloid formation. We find that stress from obliquity may be the key to explaining several characteristics of observed cycloids such as the shape of equator-crossing cycloids and the shift in the crack patterns in the Argadnel Regio region. All of those improvements of the fit between observaiton and theory seem to require Jupiter crossing Europa's equatorial plane 45 deg. to 180 deg after perijove passage. Suggestive of complex orbital dynamics that lock the direction of Europe's pericenter with the direction of the ascending node at the time these cracks were formed.

Optical Observations of Lightning in Northern India Himalayan Mountain Countries and Tibet

NASA Technical Reports Server (NTRS)

Boeck, William L.; Mach, D. M.; Goodman, S. J.; Christian, Hugh J., Jr.

1999-01-01

This study summarizes the results of an analysis of data from the LIS instrument on the TRMM platform. The data for the Indian summer monsoon season is examined to study the seasonal patterns of the geographic and diurnal distribution of lightning storms. The storms on the Tibetan plateau show a single large diurnal peak at about 1400 local solar time. A region of Northern Pakistan has two storm peaks at 0200 and 1400 local solar time. The morning peak is half the magnitude of the afternoon peak. The region south of the Himalayan Mountains has a combined diurnal cycle in location and time of storm occurrence.

Optical Observations of Lightning in Northern India, Himalayan Mountain Countries and Tibet

NASA Technical Reports Server (NTRS)

Boeck, W. L.; Mach, D.; Goodman, S. J.; Christian, H. J., Jr.

1999-01-01

This study summarizes the results of an analysis of data from the LIS instrument on the TRMM platform. The data for the Indian summer monsoon season is examined to study the seasonal patterns of the geographic and diurnal distribution of lightning storms. The storms on the Tibetan plateau show a single large diurnal peak at about 1400 local solar time. A region of Northern Pakistan has two storm peaks at 0200 and 1400 local solar time. The morning peak is half the magnitude of the afternoon peak. The region south of the Himalayan Mountains has a combined diurnal cycle in location and time of storm occurrence.

Lunar orientation in a beetle.

PubMed

Dacke, Marie; Byrne, Marcus J; Scholtz, Clarke H; Warrant, Eric J

2004-02-22

Many animals use the sun's polarization pattern to orientate, but the dung beetle Scarabaeus zambesianus is the only animal so far known to orientate using the million times dimmer polarization pattern of the moonlit sky. We demonstrate the relative roles of the moon and the nocturnal polarized-light pattern for orientation. We find that artificially changing the position of the moon, or hiding the moon's disc from the beetle's field of view, generally did not influence its orientation performance. We thus conclude that the moon does not serve as the primary cue for orientation. The effective cue is the polarization pattern formed around the moon, which is more reliable for orientation. Polarization sensitivity ratios in two photoreceptors in the dorsal eye were found to be 7.7 and 12.9, similar to values recorded in diurnal navigators. These results agree with earlier results suggesting that the detection and analysis of polarized skylight is similar in diurnal and nocturnal insects.

Differential Regulation of Duplicate Light-Dependent Protochlorophyllide Oxidoreductases in the Diatom Phaeodactylum tricornutum

PubMed Central

Hunsperger, Heather M.; Cattolico, Rose Ann

2016-01-01

Background Diatoms (Bacilliariophyceae) encode two light-dependent protochlorophyllide oxidoreductases (POR1 and POR2) that catalyze the penultimate step of chlorophyll biosynthesis in the light. Algae live in dynamic environments whose changing light levels induce photoacclimative metabolic shifts, including altered cellular chlorophyll levels. We hypothesized that the two POR proteins may be differentially adaptive under varying light conditions. Using the diatom Phaeodactylum tricornutum as a test system, differences in POR protein abundance and por gene expression were examined when this organism was grown on an alternating light:dark cycles at different irradiances; exposed to continuous light; and challenged by a significant decrease in light availability. Results For cultures maintained on a 12h light: 12h dark photoperiod at 200μE m−2 s−1 (200L/D), both por genes were up-regulated during the light and down-regulated in the dark, though por1 transcript abundance rose and fell earlier than that of por2. Little concordance occurred between por1 mRNA and POR1 protein abundance. In contrast, por2 mRNA and POR2 protein abundances followed similar diurnal patterns. When 200L/D P. tricornutum cultures were transferred to continuous light (200L/L), the diurnal regulatory pattern of por1 mRNA abundance but not of por2 was disrupted, and POR1 but not POR2 protein abundance dropped steeply. Under 1200μE m−2 s−1 (1200L/D), both por1 mRNA and POR1 protein abundance displayed diurnal oscillations. A compromised diel por2 mRNA response under 1200L/D did not impact the oscillation in POR2 abundance. When cells grown at 1200L/D were then shifted to 50μE m−2 s−1 (50L/D), por1 and por2 mRNA levels decreased swiftly but briefly upon light reduction. Thereafter, POR1 but not POR2 protein levels rose significantly in response to this light stepdown. Conclusion Given the sensitivity of diatom por1/POR1 to real-time light cues and adherence of por2/POR2 regulation to the diurnal cycle, we suggest that POR1 supports photoacclimation, whereas POR2 is the workhorse for daily chlorophyll synthesis. PMID:27367227

Shiftwork and Diurnal Salivary Cortisol Patterns Among Police Officers

PubMed Central

Charles, Luenda E.; Fekedulegn, Desta; Burchfiel, Cecil M.; Hartley, Tara A.; Andrew, Michael E.; Violanti, John M.; Miller, Diane B.

2016-01-01

Objective To investigate associations between shiftwork and diurnal salivary cortisol among 319 police officers (77.7% men) Methods Information on shiftwork was obtained from the City of Buffalo, NY electronic payroll records. Saliva was collected using Salivettes at seven time points and analyzed for free cortisol concentrations (nmol/L) using a chemiluminescence immunoassay. Mean slopes and areas under the curve were compared across shift schedule using analysis of variance (ANOVA)/analysis of covariance (ANCOVA). Results Officers working primarily on the night shift had a significantly shallower slope. Mean slope (nmol/L/minutes) of the cortisol curve varied significantly across shifts (day: −0.00332 ± 0.00017, afternoon: −0.00313 ± 0.00018, night: −0.00257 ± 0.0002); adjusted P = 0.023. Conclusions Our results suggest that night shiftwork is a work-place factor that may alter the response of the hypothalamic–pituitary–adrenal (HPA) axis to the circadian cues responsible for the pattern of the diurnal cortisol curve. PMID:27129020

DOE Office of Scientific and Technical Information (OSTI.GOV)

Fehrenbacher, Jennifer S.; Russell, Ann D.; Davis, Catherine V.

Mg/Ca ratios of planktic foraminifera are commonly used to reconstruct past ocean temperatures. However, intrashell Mg/Ca ratios exhibit a pattern of alternating high and low Mg-bands in many species. Whereas mechanisms controlling Mg variability are poorly constrained, recent experiments demonstrate that it is paced by the diurnal light/dark cycle in Orbulina universa, which forms a terminal shell of simple spherical geometry. It is unknown whether Mg-heterogeneity is diurnally paced in species with complex shell morphologies, or is the result of growth processes. Here, we show that high Mg/Ca-calcite also forms at night in cultured specimens of the multi-chambered planktic foraminiferamore » Neogloboquadrina dutertrei. Our results demonstrate that N. dutertrei adds a significant amount of calcite, and nearly all Mg-bands, after the final chamber forms. Furthermore, these results have implications for interpreting patterns of calcification in N. dutertrei, and possibly other foraminifera species, and suggests diurnal Mg-banding is an intrinsic component of biomineralization in planktic foraminifera.« less

Light at night alters daily patterns of cortisol and clock proteins in female Siberian hamsters.

PubMed

Bedrosian, T A; Galan, A; Vaughn, C A; Weil, Z M; Nelson, R J

2013-06-01

Humans and other organisms have adapted to a 24-h solar cycle in response to life on Earth. The rotation of the planet on its axis and its revolution around the sun cause predictable daily and seasonal patterns in day length. To successfully anticipate and adapt to these patterns in the environment, a variety of biological processes oscillate with a daily rhythm of approximately 24 h in length. These rhythms arise from hierarchally-coupled cellular clocks generated by positive and negative transcription factors of core circadian clock gene expression. From these endogenous cellular clocks, overt rhythms in activity and patterns in hormone secretion and other homeostatic processes emerge. These circadian rhythms in physiology and behaviour can be organised by a variety of cues, although they are most potently entrained by light. In recent history, there has been a major change from naturally-occurring light cycles set by the sun, to artificial and sometimes erratic light cycles determined by the use of electric lighting. Virtually every individual living in an industrialised country experiences light at night (LAN) but, despite its prevalence, the biological effects of such unnatural lighting have not been fully considered. Using female Siberian hamsters (Phodopus sungorus), we investigated the effects of chronic nightly exposure to dim light on daily rhythms in locomotor activity, serum cortisol concentrations and brain expression of circadian clock proteins (i.e. PER1, PER2, BMAL1). Although locomotor activity remained entrained to the light cycle, the diurnal fluctuation of cortisol concentrations was blunted and the expression patterns of clock proteins in the suprachiasmatic nucleus and hippocampus were altered. These results demonstrate that chronic exposure to dim LAN can dramatically affect fundamental cellular function and emergent physiology. © 2013 British Society for Neuroendocrinology.

Circadian exosomal expression of renal thiazide-sensitive NaCl cotransporter (NCC) and prostasin in healthy individuals.

PubMed

Castagna, Annalisa; Pizzolo, Francesca; Chiecchi, Laura; Morandini, Francesca; Channavajjhala, Sarath Kiran; Guarini, Patrizia; Salvagno, Gianluca; Olivieri, Oliviero

2015-06-01

A circadian timing system is involved in the maintenance of fluid and electrolyte balance and blood pressure control. Aldosterone and vasopressin modulate ion transporters and channels crucial in sodium (Na) and water reabsorption such as the epithelium Na channel and the renal thiazide-sensitive NaCl cotransporter (NCC). We analyzed in urinary exosomes the intraday variations of NCC and prostasin expression and the association with electrolytes and water balance parameters. Blood and urine samples were collected at five time points during the day from five healthy subjects. Blood renin, aldosterone, cortisol, ACTH, and plasmatic and urinary Na, potassium, creatinine, adiuretin (ADH), NCC, and prostasin were evaluated. ACTH and cortisol showed a circadian pattern, similarly to aldosterone, while exosomal NCC and prostasin pattern were similar to urinary ADH, decreased in the morning and subsequently increased in the afternoon and evening. In urinary exosomes, NCC and prostasin had a diurnal pattern parallel to ADH and aquaporin 2, confirming that, in healthy subjects, both prostasin and NCC relate to water balance. These results provide suggestions for a possible chronotherapeutic approach in patients treated with thiazides, diuretic drugs acting as specific inhibitors of NCC-mediated Na reabsorption. © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Impact of topography on the diurnal cycle of summertime moist convection in idealized simulations

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hassanzadeh, Hanieh; Schmidli, Jürg; Langhans, Wolfgang

The impact of an isolated mesoscale mountain on the diurnal cycle of moist convection and its spatial variation is investigated. Convection-resolving simulations of flow over 3D Gaussian-shaped mountains are performed for a conditionally unstable atmosphere under diurnal radiative forcing. The results show considerable spatial variability in terms of timing and amount of convective precipitation. This variability relates to different physical mechanisms responsible for convection initiation in different parts of the domain. During the late morning, the mass convergence from the radiatively driven diurnal upslope flow confronting the large-scale incident background flow triggers strong convective precipitation over the mountain lee slope.more » As a consequence, instabilities in the boundary layer are swept out by the emerging cold pool in the vicinity of the mountain, and some parts over the mountain near-field receive less rainfall than the far-field. Over the latter, an unperturbed boundary-layer growth allows for sporadic convective initiation. Still, secondary convection triggered over the leading edge of the cold pool spreads some precipitation over the downstream near-field. Detailed analysis of our control simulation provides further explanation of this frequently observed precipitation pattern over mountains and adjacent plains. Sensitivity experiments indicate a significant influence of the mountain height on the precipitation pattern over the domain.« less

Impact of topography on the diurnal cycle of summertime moist convection in idealized simulations

DOE PAGES

Hassanzadeh, Hanieh; Schmidli, Jürg; Langhans, Wolfgang; ...

2015-08-31

The impact of an isolated mesoscale mountain on the diurnal cycle of moist convection and its spatial variation is investigated. Convection-resolving simulations of flow over 3D Gaussian-shaped mountains are performed for a conditionally unstable atmosphere under diurnal radiative forcing. The results show considerable spatial variability in terms of timing and amount of convective precipitation. This variability relates to different physical mechanisms responsible for convection initiation in different parts of the domain. During the late morning, the mass convergence from the radiatively driven diurnal upslope flow confronting the large-scale incident background flow triggers strong convective precipitation over the mountain lee slope.more » As a consequence, instabilities in the boundary layer are swept out by the emerging cold pool in the vicinity of the mountain, and some parts over the mountain near-field receive less rainfall than the far-field. Over the latter, an unperturbed boundary-layer growth allows for sporadic convective initiation. Still, secondary convection triggered over the leading edge of the cold pool spreads some precipitation over the downstream near-field. Detailed analysis of our control simulation provides further explanation of this frequently observed precipitation pattern over mountains and adjacent plains. Sensitivity experiments indicate a significant influence of the mountain height on the precipitation pattern over the domain.« less

Habitual sleep quality and diurnal rhythms of salivary cortisol and dehydroepiandrosterone in postmenopausal women.

PubMed

Huang, Tianyi; Poole, Elizabeth M; Vetter, Celine; Rexrode, Kathryn M; Kubzansky, Laura D; Schernhammer, Eva; Rohleder, Nicolas; Hu, Frank B; Redline, Susan; Tworoger, Shelley S

2017-10-01

Dysregulation of the hypothalamus-pituitary-adrenal (HPA) axis has been suggested as a potential mechanism linking sleep and cardiometabolic disorders. However, the associations of two primary outputs of the HPA axis, cortisol and its antagonist dehydroepiandrosterone (DHEA), with sleep are less well studied. In the Nurses' Health Study II, 233 postmenopausal women provided five timed saliva samples over one day (immediately upon waking, 45min, 4h, and 10h after waking, and prior to going to sleep) to measure cortisol and DHEA. Of these, 209 completed assessment of their habitual sleep patterns using the Pittsburgh Sleep Quality Index (PSQI). We used piecewise linear mixed models to compare cross-sectional associations of slopes reflecting diurnal cortisol and DHEA rhythms with overall sleep quality and with seven sub-components. Overall, we observed no differences in the diurnal patterns of cortisol or DHEA between good versus poor sleepers as assessed by the global PSQI score. However, longer sleep latency was associated with significantly reduced cortisol awakening rise (p=0.02). Poorer subjective sleep quality (p=0.02), shorter sleep duration (p=0.02), and lower sleep efficiency (p=0.03) were associated with slower rate of cortisol decline later in the day. Women reporting daytime dysfunction had a sharper cortisol decline early in the day (p=0.03) but a flattened decline later in the day (p=0.01). The differences in diurnal patterns of DHEA between good versus poor sleepers, though less pronounced, were similar in direction to those of cortisol. Self-reported sleep duration, efficiency, latency and daytime dysfunction were associated with altered diurnal rhythms of cortisol and, to a lesser extent, DHEA. These findings provide support for the interplay between sleep and the HPA axis that may contribute to cardiometabolic disease. Copyright © 2017 Elsevier Ltd. All rights reserved.

Diurnal patterns and associations among salivary cortisol, DHEA and alpha-amylase in older adults.

PubMed

Wilcox, Rand R; Granger, Douglas A; Szanton, Sarah; Clark, Florence

2014-04-22

Cortisol and dehydroepiandrosterone (DHEA) are considered to be valuable markers of the hypothalamus-pituitary-adrenal (HPA) axis, while salivary alpha-amylase (sAA) reflects the autonomic nervous system. Past studies have found certain diurnal patterns among these biomarkers, with some studies reporting results that differ from others. Also, some past studies have found an association among these three biomarkers while other studies have not. This study investigates these patterns and associations in older adults by taking advantage of modern statistical methods for dealing with non-normality, outliers and curvature. Basic characteristics of the data are reported as well, which are relevant to understanding the nature of any patterns and associations. Boxplots were used to check on the skewness and presence of outliers, including the impact of using simple transformations for dealing with non-normality. Diurnal patterns were investigated using recent advances aimed at comparing medians. When studying associations, the initial step was to check for curvature using a non-parametric regression estimator. Based on the resulting fit, a robust regression estimator was used that is designed to deal with skewed distributions and outliers. Boxplots indicated highly skewed distributions with outliers. Simple transformations (such as taking logs) did not deal with this issue in an effective manner. Consequently, diurnal patterns were investigated using medians and found to be consistent with some previous studies but not others. A positive association between awakening cortisol levels and DHEA was found when DHEA is relatively low; otherwise no association was found. The nature of the association between cortisol and DHEA was found to change during the course of the day. Upon awakening, cortisol was found to have no association with sAA when DHEA levels are relatively low, but otherwise there is a negative association. DHEA was found to have a positive association with sAA upon awakening. Shortly after awakening and for the remainder of the day, no association was found between DHEA and sAA ignoring cortisol. For DHEA and cortisol (taken as the independent variables) versus sAA (the dependent variable), again an association is found only upon awakening. Copyright © 2014 Elsevier Inc. All rights reserved.

Influences of meteorological parameters on indoor radon concentrations (222Rn) excluding the effects of forced ventilation and radon exhalation from soil and building materials.

PubMed

Schubert, Michael; Musolff, Andreas; Weiss, Holger

2018-06-13

Elevated indoor radon concentrations ( 222 Rn) in dwellings pose generally a potential health risk to the inhabitants. During the last decades a considerable number of studies discussed both the different sources of indoor radon and the drivers for diurnal and multi day variations of its concentration. While the potential sources are undisputed, controversial opinions exist regarding their individual relevance and regarding the driving influences that control varying radon indoor concentrations. These drivers include (i) cyclic forced ventilation of dwellings, (ii) the temporal variance of the radon exhalation from soil and building materials due to e.g. a varying moisture content and (iii) diurnal and multi day temperature and pressure patterns. The presented study discusses the influences of last-mentioned temporal meteorological parameters by effectively excluding the influences of forced ventilation and undefined radon exhalation. The results reveal the continuous variation of the indoor/outdoor pressure gradient as key driver for a constant "breathing" of any interior space, which affects the indoor radon concentration with both diurnal and multi day patterns. The diurnally recurring variation of the pressure gradient is predominantly triggered by the day/night cycle of the indoor temperature that is associated with an expansion/contraction of the indoor air volume. Multi day patterns, on the other hand, are mainly due to periods of negative air pressure indoors that is triggered by periods of elevated wind speeds as a result of Bernoulli's principle. Copyright © 2018 Elsevier Ltd. All rights reserved.

Viscosity changes of riparian water controls diurnal fluctuations of stream-flow and DOC concentration

NASA Astrophysics Data System (ADS)

Schwab, Michael; Klaus, Julian; Pfister, Laurent; Weiler, Markus

2015-04-01

Diurnal fluctuations in stream-flow are commonly explained as being triggered by the daily evapotranspiration cycle in the riparian zone, leading to stream flow minima in the afternoon. While this trigger effect must necessarily be constrained by the extent of the growing season of vegetation, we here show evidence of daily stream flow maxima in the afternoon in a small headwater stream during the dormant season. We hypothesize that the afternoon maxima in stream flow are induced by viscosity changes of riparian water that is caused by diurnal temperature variations of the near surface groundwater in the riparian zone. The patterns were observed in the Weierbach headwater catchment in Luxembourg. The catchment is covering an area of 0.45 km2, is entirely covered by forest and is dominated by a schistous substratum. DOC concentration at the outlet of the catchment was measured with the field deployable UV-Vis spectrometer spectro::lyser (scan Messtechnik GmbH) with a high frequency of 15 minutes over several months. Discharge was measured with an ISCO 4120 Flow Logger. During the growing season, stream flow shows a frequently observed diurnal pattern with discharge minima in the afternoon. During the dormant season, a long dry period with daily air temperature amplitudes of around 10 ° C occurred in March and April 2014, with discharge maxima in the afternoon. The daily air temperature amplitude led to diurnal variations in the water temperature of the upper 10 cm of the riparian zone. Higher riparian water temperatures cause a decrease in water viscosity and according to the Hagen-Poiseuille equation, the volumetric flow rate is inversely proportional to viscosity. Based on the Hagen-Poiseuille equation and the viscosity changes of water, we calculated higher flow rates of near surface groundwater through the riparian zone into the stream in the afternoon which explains the stream flow maxima in the afternoon. With the start of the growing season, the viscosity induced diurnal effect is overlain by the stronger influence of evapotranspiration. Diurnal DOC fluctuations show daily maxima in the afternoon. While daily variations in DOC concentrations are often explained by faster in-stream biogeochemical processes during daylight, we here propose that the viscosity effect in the riparian zone could explain the afternoon peaks in DOC concentrations. Our records show that daily water temperature variations and therefore viscosity changes only occur in the near surface parts of the riparian zone, where the DOC concentrations are higher than in deeper parts of the riparian zone. We calculated, that the viscosity induced higher flow rates from the near surface parts of the riparian zone can explain the DOC concentration maxima in the afternoon. As the viscosity effect does not disappear during the growing season but is just smaller than the evapotranspiration effect, the DOC concentration pattern is not changing between the dormant and growing seasons. The different controls of diurnal fluctuations of stream-flow and water quality concentrations need to be carefully considered in order to better understand the different patterns in catchment hydrology.

Diurnal and circadian oscillations in expression of kisspeptin, kisspeptin receptor and gonadotrophin-releasing hormone 2 genes in the grass puffer, a semilunar-synchronised spawner.

PubMed

Ando, H; Ogawa, S; Shahjahan, Md; Ikegami, T; Doi, H; Hattori, A; Parhar, I

2014-07-01

In seasonally breeding animals, the circadian and photoperiodic regulation of neuroendocrine system is important for precisely-timed reproduction. Kisspeptin, encoded by the Kiss1 gene, acts as a principal positive regulator of the reproductive axis by stimulating gonadotrophin-releasing hormone (GnRH) neurone activity in vertebrates. However, the precise mechanisms underlying the cyclic regulation of the kisspeptin neuroendocrine system remain largely unknown. The grass puffer, Takifugu niphobles, exhibits a unique spawning rhythm: spawning occurs 1.5-2 h before high tide on the day of spring tide every 2 weeks, and the spawning rhythm is connected to circadian and lunar-/tide-related clock mechanisms. The grass puffer has only one kisspeptin gene (kiss2), which is expressed in a single neural population in the preoptic area (POA), and has one kisspeptin receptor gene (kiss2r), which is expressed in the POA and the nucleus dorsomedialis thalami. Both kiss2 and kiss2r show diurnal variations in expression levels, with a peak at Zeitgeber time (ZT) 6 (middle of day time) under the light/dark conditions. They also show circadian expression with a peak at circadian time 15 (beginning of subjective night-time) under constant darkness. The synchronous and diurnal oscillations of kiss2 and kiss2r expression suggest that the action of Kiss2 in the diencephalon is highly dependent on time. Moreover, midbrain GnRH2 gene (gnrh2) but not GnRH1 or GnRH3 genes show a unique semidiurnal oscillation with two peaks at ZT6 and ZT18 within a day. The cyclic expression of kiss2, kiss2r and gnrh2 may be important in the control of the precisely-timed diurnal and semilunar spawning rhythm of the grass puffer, possibly through the circadian clock and melatonin, which may transmit the photoperiodic information of daylight and moonlight to the reproductive neuroendocrine centre in the hypothalamus. © 2014 British Society for Neuroendocrinology.

Maternal negative affect during infancy is linked to disrupted patterns of diurnal cortisol and alpha asymmetry across contexts during childhood.

PubMed

Brooker, Rebecca J; Davidson, Richard J; Goldsmith, H Hill

2016-02-01

Maternal negative affect in the early environment is believed to sensitize long-term coping capacities in children. Yet, little work has identified physiological systems associated with coping responses, which may serve as mechanisms for links between early maternal negativity and child outcomes. Using a longitudinal twin sample (N=89), we found that high levels of maternal negative affect during infancy were associated with dysregulation of diurnal cortisol and electroencephalograph (EEG) asymmetry, two physiological systems that may support active approach-oriented coping when children are 7years old. Flattened slopes of diurnal cortisol were also associated with greater numbers of concurrent overanxious behaviors in children. A mediation analysis supported the role of dysregulated diurnal cortisol as a mediator of the link between maternal negative affect in the early environment and childhood risk for anxiety problems. Copyright © 2015 Elsevier Inc. All rights reserved.

Effect of equatorial electrodynamics on low-latitude thermosphere as inferred from neutral optical dayglow emission observations

NASA Astrophysics Data System (ADS)

Karan, D. K.; Duggirala, P. R.

2017-12-01

The diurnal variations in daytime airglow emission intensity measurements at three wavelengths OI 777.4 nm, OI 630.0 nm, and OI 557.7 nm made from a low-latitude location, Hyderabad (Geographic 17.50 N, 78.40 E; 8.90 N Mag. Lat) in India have been investigated. The intensity patterns showed both symmetric and asymmetric behavior in their respective diurnal emission variability with respect to local noon. The asymmetric diurnal behavior is not expected considering the photochemical nature of the production mechanisms. The reason for this observed asymmetric diurnal behavior has been found to be predominantly the temporal variation in the equatorial electrodynamics. The plasma that is transported across latitudes due to the action of varying electric field strength over the magnetic equator in the daytime contributes to the asymmetric diurnal behavior in the neutral daytime airglow emissions. Independent magnetic and radio measurements support this finding. It is also noted that this asymmetric diurnal behavior in the neutral emission intensities has a solar cycle dependence with more number of days during high solar activity period showing asymmetric diurnal behavior compared to those during low-solar activity epoch. These intensity variations over long time scale demonstrate that the daytime neutral optical emissions are extremely sensitive to the changes in the eastward electric field over low- and equatorial-latitudes.

Overexpression of Populus×canescens isoprene synthase gene in Camelina sativa leads to alterations in its growth and metabolism.

PubMed

Rossi, Lorenzo; Borghi, Monica; Yang, Jinfen; Xie, De-Yu

2017-08-01

Isoprene (2-methyl-1,3-butadiene) is a hemiterpene molecule. It has been estimated that the plant kingdom emits 500-750 million tons of isoprene in the environment, half of which results from tropical broadleaf trees and the remainder from shrubs. Camelina (Camelina sativa (L.) Crantz) is an emerging bioenergy plant for biodiesel. In this study, we characterized isoprene formation following a diurnal/nocturnal cycle in wild-type Camelina plants. To understand the potential effects of isoprene emission on this herbaceous plant, a gray poplar Populus×canescens isoprene synthase gene (PcISPS) was overexpressed in Camelina. Transgenic plants showed increased isoprene production, and the emissions were characterized by a diurnal/nocturnal cycle. Measurements of the expression of six genes of the plastidial 2-C-methyl-d-erythriol-4-phosphate (MEP) pathway revealed that the expression patterns of three key genes were associated with isoprene formation dynamics in the three genotypic plants. Conversely, dissimilar gene expression levels existed in different genotypes, indicating that dynamics and variations occurred among plants. Moreover, transgenic plants grew shorter and developed smaller leaves than the wild-type and empty vector control transgenic plants. Photosynthetic analysis showed that the CO 2 assimilation rate, intracellular CO 2 concentration, mesophyll conductance and contents of chlorophylls a and b were similar among PcISPS transgenic, empty-vector control transgenic, and wild-type plants, indicating that the transgene did not negatively affect photosynthesis. Based on these results, we suggest that the reduced biomass was likely a trade-off consequence of the increased isoprene emission. Copyright © 2017 Elsevier GmbH. All rights reserved.

Diurnal and Nocturnal Flight Activity of Blow Flies (Diptera: Calliphoridae) in a Rainforest Fragment in Brazil: Implications for the Colonization of Homicide Victims.

PubMed

Soares, Thiago F; Vasconcelos, Simao D

2016-11-01

Nocturnal flight of blow flies (Diptera: Calliphoridae) is a controversial issue in forensic entomology. We performed two field experiments to investigate the diurnal and nocturnal activity of six blow fly species in a rainforest fragment in Brazil. Initially, nocturnal (17:30-05:30) versus diurnal (05:30-17:30) flight activity was investigated. Only 3.9% of adults were collected at night, mostly the native species Mesembrinella bicolor, and nocturnal oviposition did not occur. In the second experiment, collection of adults took place at the following intervals: 05:30-08:30, 08:30-11:30, 11:30-14:30, and 14:30-17:30. The proportions of adults did not differ significantly among the four diurnal intervals, except for Hemilucilia segmentaria, which was captured more frequently in the early morning. Calliphoridae has predominantly diurnal behavior, not laying eggs in darkness. The association of the native species M. bicolor, Hemilucilia semidiaphana, and H. segmentaria to forested areas reinforces the forensic relevance of data on their flight pattern. © 2016 American Academy of Forensic Sciences.

Diurnal changes in the power spectral characteristics of eye movements and heart rate variability in the human fetus at term.

PubMed

Morokuma, S; Horimoto, N; Nakano, H

2001-08-01

It is well known that 1/f characteristics in power spectral patterns exist in various biological factors including heart rate variability. In the present study, we tried to elucidate the diurnal variation in spectral properties of eye movement and heart rate variability in the human fetus at term, via continuous 24-h observation of both these parameters. Studied were five uncomplicated fetuses at term. We observed eye movement and fetal heart rate (FHR) with real-time ultrasound and Doppler cardiotocograph, respectively, and analyzed the diurnal change in spectral properties, using the maximum entropy method. In four of five cases, the slope values of power spectra for both eye movement frequency and FHR, ranging approximately between 0.5 and 1.8, indicated diurnal variation, where the slopes tended to have high values during the day and low values at night. These findings suggest that, in the human fetus at term, eye movement and FHR are under the control of a common central mechanism, and this center changes its complexity as seen through diurnal rhythm.

Diurnal variations in personal care products in seawater and mussels at three Mediterranean coastal sites.

PubMed

Picot-Groz, Marina; Fenet, Hélène; Martinez Bueno, Maria Jesus; Rosain, David; Gomez, Elena

2018-03-01

The presence of personal care products (PCPs) in the marine environment is of major concern. PCPs, UV filters, and musks can enter the marine environment indirectly through wastewater or directly via recreational activities. We conducted this study to document patterns in the occurrence of seven PCPs at three coastal sites impacted by recreational activities during 1 day. The study focused on diurnal variations in these seven PCPs in seawater and indigenous mussels. In seawater, UV filters showed diurnal variations that mirrored variations in recreational activities at the sites. Ethylhexyl methoxycinnamate (EHMC) and octocrylene (OC) water concentrations increased from under the limit of quantification in the morning to 106 and 369 ng/L, respectively, when recreational activities were the highest. In mussels, diurnal variations in OC were observed, with the lowest concentrations recorded in the morning and then increasing throughout the day. As Mytilus spp. are widely used as sentinels in coastal pollution monitoring programs (mussel watch), our findings on diurnal variations could enhance sampling recommendations for recreational sites impacted by PCPs.

Diurnal Change of Soil Carbon Flux of Binhai New District

NASA Astrophysics Data System (ADS)

Wang, T. F.; Mao, T. Y.; Ye, W.

2018-05-01

In order to investigate the factors influencing diurnal change of soil carbon flux of Binhai New District. Field observation experiments were carried out by using LC pro-SD photosynthetic apparatus. The diurnal changes of soil carbon flux and its environmental factors such as atmosphere temperature and soil temperature were analysed. The results indicated that soil carbon flux appeared single diurnal pattern. The diurnal average of soil carbon flux ranked from 0.2761 to 2.3367μmo1/m2/s. Soil carbon flux varied significantly among different land use regimes(P<0.001). Significant relationships were found between soil respiration rate and atmosphere temperature, which could he best described by exponential equations (P<0.05). The Q10 value was based on the exponential correlations. Its value of Tian Keyuan, ECO-city, Dagu-Outlet and Yongding-River was 8.331, 6.049, 2.651 and 1.391, respectively. There were quadratic correlations between soil carbon flux and soil temperature (10cm). And soil temperature could account for more than 32.27% of the soil carbon flux changes (P<0.05, R2=0.3227-0.7465).

Evidence for a GPR18 Role in Diurnal Regulation of Intraocular Pressure

PubMed Central

Miller, Sally; Leishman, Emma; Oehler, Olivia; Daily, Laura; Murataeva, Natalia; Wager-Miller, Jim; Bradshaw, Heather; Straiker, Alex

2016-01-01

Purpose The diurnal cycling of intraocular pressure (IOP) was first described in humans more than a century ago. This cycling is preserved in other species. The physiologic underpinning of this diurnal variation in IOP remains a mystery, even though elevated pressure is indicated in most forms of glaucoma, a common cause of blindness. Once identified, the system that underlies diurnal variation would represent a natural target for therapeutic intervention. Methods Using normotensive mice, we measured the regulation of ocular lipid species by the enzymes fatty acid amide hydrolase (FAAH) and N-arachidonoyl phosphatidylethanolamine phospholipase (NAPE-PLD), mRNA expression of these enzymes, and their functional role in diurnal regulation of IOP. Results We now report that NAPE-PLD and FAAH mice do not exhibit a diurnal cycling of IOP. These enzymes produce and break down acylethanolamines, including the endogenous cannabinoid anandamide. The diurnal lipid profile in mice shows that levels of most N-acyl ethanolamines and, intriguingly, N-arachidonoyl glycine (NAGly), decline at night: NAGly is a metabolite of arachidonoyl ethanolamine and a potent agonist at GPR18 that lowers intraocular pressure. The GPR18 blocker O1918 raises IOP during the day when pressure is low, but not at night. Quantitative PCR analysis shows that FAAH mRNA levels rise with pressure, suggesting that FAAH mediates the changes in pressure. Conclusions Our results support FAAH-dependent NAGly action at GPR18 as the physiologic basis of the diurnal variation of intraocular pressure in mice. PMID:27893106

Changing On Diurnal Cycle Of Rainfall In Northern Coastal Of West Java

NASA Astrophysics Data System (ADS)

Yulihastin, E.; Hadi, T. W.; Ningsih, N. S.

2017-12-01

The floods event in the north of Java was largely due to persistent of rainfall that occurred in the morning which indicated of deviation of diurnal pattern of rainfall. The shift of the phase of diurnal rainfall cycle using TRMM satellite hourly data of 3B41RT on the rainy period of 2000-2016 exhibits over land from Late Afternoon-Early Midnight (LA-EM) to morning. The peak of the cycle changes from diurnal to semidiurnal with a peak occurring in LA-EM and morning. Location of rainfall which usually occurs in the oceans shifted into near coastal area. The classification of diurnal rainfall cycles based on composite analysis shows four types: Normal (N) Type (45.6%) with one peak rainfall occurring in the afternoon until night, Diurnal (D) Type (26%) with one peak and phase opposite to normal type, Semidiurnal (SD) Type (6.5 %) with two peaks and the main peak occurring in the afternoon until night, Third Diurnal (TD) Type (21.7%) with three peaks and the main peak occurs in the morning. The classification was confirmed using the objective method of Empirical Mode Decomposition (EMD) and obtained three IMFs representing three diurnal cycle modes of Type TD (67.8%) with the main rain peak taking place in the afternoon, Type D with rain peak occurring in the early hours (18.9%), and SD type (9.9%) with the first peak occurred in the afternoon. For D Type, the results also prove that the diurnal cycle with significant deviations in amplitude occurred in February 2002, 2004, 2008, 2014, wich is the maximum rainfall occurs in the EM. It also seems that in those years, rainfall intensity is concentrated on the northern coast of West Java while in the Java Sea rainfall was minimum.

Groundwater Evapotranspiration from Diurnal Water Table Fluctuation: a Modified White Based Method Using Drainable and Fillable Porosity

NASA Astrophysics Data System (ADS)

Acharya, S.; Mylavarapu, R.; Jawitz, J. W.

2012-12-01

In shallow unconfined aquifers, the water table usually shows a distinct diurnal fluctuation pattern corresponding to the twenty-four hour solar radiation cycle. This diurnal water table fluctuation (DWTF) signal can be used to estimate the groundwater evapotranspiration (ETg) by vegetation, a method known as the White [1932] method. Water table fluctuations in shallow phreatic aquifers is controlled by two distinct storage parameters, drainable porosity (or specific yield) and the fillable porosity. Yet, it is implicitly assumed in most studies that these two parameters are equal, unless hysteresis effect is considered. The White based method available in the literature is also based on a single drainable porosity parameter to estimate the ETg. In this study, we present a modification of the White based method to estimate ETg from DWTF using separate drainable (λd) and fillable porosity (λf) parameters. Separate analytical expressions based on successive steady state moisture profiles are used to estimate λd and λf, instead of the commonly employed hydrostatic moisture profile approach. The modified method is then applied to estimate ETg using the DWTF data observed in a field in northeast Florida and the results are compared with ET estimations from the standard Penman-Monteith equation. It is found that the modified method resulted in significantly better estimates of ETg than the previously available method that used only a single, hydrostatic-moisture-profile based λd. Furthermore, the modified method is also used to estimate ETg even during rainfall events which produced significantly better estimates of ETg as compared to the single λd parameter method.

Diurnal Variations of Depression-Related Health Information Seeking: Case Study in Finland Using Google Trends Data

PubMed Central

Kettunen, Jyrki; Eirola, Emil; Paakkonen, Heikki

2018-01-01

Background Some of the temporal variations and clock-like rhythms that govern several different health-related behaviors can be traced in near real-time with the help of search engine data. This is especially useful when studying phenomena where little or no traditional data exist. One specific area where traditional data are incomplete is the study of diurnal mood variations, or daily changes in individuals’ overall mood state in relation to depression-like symptoms. Objective The objective of this exploratory study was to analyze diurnal variations for interest in depression on the Web to discover hourly patterns of depression interest and help seeking. Methods Hourly query volume data for 6 depression-related queries in Finland were downloaded from Google Trends in March 2017. A continuous wavelet transform (CWT) was applied to the hourly data to focus on the diurnal variation. Longer term trends and noise were also eliminated from the data to extract the diurnal variation for each query term. An analysis of variance was conducted to determine the statistical differences between the distributions of each hour. Data were also trichotomized and analyzed in 3 time blocks to make comparisons between different time periods during the day. Results Search volumes for all depression-related query terms showed a unimodal regular pattern during the 24 hours of the day. All queries feature clear peaks during the nighttime hours around 11 PM to 4 AM and troughs between 5 AM and 10 PM. In the means of the CWT-reconstructed data, the differences in nighttime and daytime interest are evident, with a difference of 37.3 percentage points (pp) for the term “Depression,” 33.5 pp for “Masennustesti,” 30.6 pp for “Masennus,” 12.8 pp for “Depression test,” 12.0 pp for “Masennus testi,” and 11.8 pp for “Masennus oireet.” The trichotomization showed peaks in the first time block (00.00 AM-7.59 AM) for all 6 terms. The search volumes then decreased significantly during the second time block (8.00 AM-3.59 PM) for the terms “Masennus oireet” (P<.001), “Masennus” (P=.001), “Depression” (P=.005), and “Depression test” (P=.004). Higher search volumes for the terms “Masennus” (P=.14), “Masennustesti” (P=.07), and “Depression test” (P=.10) were present between the second and third time blocks. Conclusions Help seeking for depression has clear diurnal patterns, with significant rise in depression-related query volumes toward the evening and night. Thus, search engine query data support the notion of the evening-worse pattern in diurnal mood variation. Information on the timely nature of depression-related interest on an hourly level could improve the chances for early intervention, which is beneficial for positive health outcomes. PMID:29792291

Diurnal Variations of Depression-Related Health Information Seeking: Case Study in Finland Using Google Trends Data.

PubMed

Tana, Jonas Christoffer; Kettunen, Jyrki; Eirola, Emil; Paakkonen, Heikki

2018-05-23

Some of the temporal variations and clock-like rhythms that govern several different health-related behaviors can be traced in near real-time with the help of search engine data. This is especially useful when studying phenomena where little or no traditional data exist. One specific area where traditional data are incomplete is the study of diurnal mood variations, or daily changes in individuals' overall mood state in relation to depression-like symptoms. The objective of this exploratory study was to analyze diurnal variations for interest in depression on the Web to discover hourly patterns of depression interest and help seeking. Hourly query volume data for 6 depression-related queries in Finland were downloaded from Google Trends in March 2017. A continuous wavelet transform (CWT) was applied to the hourly data to focus on the diurnal variation. Longer term trends and noise were also eliminated from the data to extract the diurnal variation for each query term. An analysis of variance was conducted to determine the statistical differences between the distributions of each hour. Data were also trichotomized and analyzed in 3 time blocks to make comparisons between different time periods during the day. Search volumes for all depression-related query terms showed a unimodal regular pattern during the 24 hours of the day. All queries feature clear peaks during the nighttime hours around 11 PM to 4 AM and troughs between 5 AM and 10 PM. In the means of the CWT-reconstructed data, the differences in nighttime and daytime interest are evident, with a difference of 37.3 percentage points (pp) for the term "Depression," 33.5 pp for "Masennustesti," 30.6 pp for "Masennus," 12.8 pp for "Depression test," 12.0 pp for "Masennus testi," and 11.8 pp for "Masennus oireet." The trichotomization showed peaks in the first time block (00.00 AM-7.59 AM) for all 6 terms. The search volumes then decreased significantly during the second time block (8.00 AM-3.59 PM) for the terms "Masennus oireet" (P<.001), "Masennus" (P=.001), "Depression" (P=.005), and "Depression test" (P=.004). Higher search volumes for the terms "Masennus" (P=.14), "Masennustesti" (P=.07), and "Depression test" (P=.10) were present between the second and third time blocks. Help seeking for depression has clear diurnal patterns, with significant rise in depression-related query volumes toward the evening and night. Thus, search engine query data support the notion of the evening-worse pattern in diurnal mood variation. Information on the timely nature of depression-related interest on an hourly level could improve the chances for early intervention, which is beneficial for positive health outcomes. ©Jonas Christoffer Tana, Jyrki Kettunen, Emil Eirola, Heikki Paakkonen. Originally published in JMIR Mental Health (http://mental.jmir.org), 23.05.2018.

Effect of the glucocorticoid receptor antagonist Org 34850 on basal and stress-induced corticosterone secretion.

PubMed

Spiga, F; Harrison, L R; Wood, S A; Atkinson, H C; MacSweeney, C P; Thomson, F; Craighead, M; Grassie, M; Lightman, S L

2007-11-01

The activity of the hypothalamic-pituitary-adrenal (HPA) axis is characterised both by an ultradian pulsatile pattern of glucocorticoid secretion and an endogenous diurnal rhythm. Glucocorticoid feedback plays a major role in regulating HPA axis activity and this mechanism occurs via two different receptors: mineralocorticoid (MR) and glucocorticoid receptors (GR). In the present study, the effects of both acute and subchronic treatment with the GR antagonist Org 34850 on basal and stress-induced HPA axis activity in male rats were evaluated. To investigate the effect of Org 34850 on basal diurnal corticosterone rhythm over the 24-h cycle, an automated blood sampling system collected samples every 10 min. Acute injection of Org 34850 (10 mg/kg, s.c.) did not affect basal or stress-induced corticosterone secretion, but was able to antagonise the inhibitory effect of the glucocorticoid agonist methylprednisolone on stress-induced corticosterone secretion. However, 5 days of treatment with Org 34850 (10 mg/kg, s.c., two times a day), compared to rats treated with vehicle (5% mulgofen in 0.9% saline, 1 ml/kg, s.c.), increased corticosterone secretion over the 24-h cycle and resulted in changes in the pulsatile pattern of hormone release, but had no significant effect on adrenocorticotrophic hormone secretion or on stress-induced corticosterone secretion. Subchronic treatment with Org 34850 did not alter GR mRNA expression in the hippocampus, paraventricular nucleus of the hypothalamus or anterior-pituitary, or MR mRNA expression in the hippocampus. Our data suggest that a prolonged blockade of GRs is required to increase basal HPA axis activity. The changes observed here with ORG 34850 are consistent with inhibition of GR-mediated negative feedback of the HPA axis. In light of the evidence showing an involvement of dysfunctional HPA axis in the pathophysiology of depression, Org 34850 could be a potential treatment for mood disorders.

Separating selection by diurnal and nocturnal pollinators on floral display and spur length in Gymnadenia conopsea.

PubMed

Sletvold, Nina; Trunschke, Judith; Wimmergren, Carolina; Agren, Jon

2012-08-01

Most plants attract multiple flower visitors that may vary widely in their effectiveness as pollinators. Floral evolution is expected to reflect interactions with the most important pollinators, but few studies have quantified the contribution of different pollinators to current selection on floral traits. To compare selection mediated by diurnal and nocturnal pollinators on floral display and spur length in the rewarding orchid Gymnadenia conopsea, we manipulated the environment by conducting supplemental hand-pollinations and selective pollinator exclusions in two populations in central Norway. In both populations, the exclusion of diurnal pollinators significantly reduced seed production compared to open pollination, whereas the exclusion of nocturnal pollinators did not. There was significant selection on traits expected to influence pollinator attraction and pollination efficiency in both the diurnal and nocturnal pollination treatment. The relative strength of selection among plants exposed to diurnal and nocturnal visitors varied among traits and populations, but the direction of selection was consistent. The results suggest that diurnal pollinators are more important than nocturnal pollinators for seed production in the study populations, but that both categories contribute to selection on floral morphology. The study illustrates how experimental manipulations can link specific categories of pollinators to observed selection on floral traits, and thus improve our understanding of how species interactions shape patterns of selection.

Association of eating behaviours with diurnal preference and rotating shift work in Japanese female nurses: a cross-sectional study.

PubMed

Yoshizaki, Takahiro; Kawano, Yukari; Noguchi, Osamu; Onishi, Junko; Teramoto, Reiko; Sunami, Ayaka; Yokoyama, Yuri; Tada, Yuki; Hida, Azumi; Togo, Fumiharu

2016-11-28

Our study examines differences in eating behaviour between day workers and rotating shift workers, and considers whether diurnal preference could explain the differences. Japanese female nurses were studied (39 day workers and 123 rotating shift workers, aged 21-63 years) using self-administered questionnaires. The questionnaires assessed eating behaviours, diurnal preference and demographic characteristics. The questionnaire in the Guidelines for the management of obesity disease issued by the Japan Society for the Study of Obesity was used to obtain scores for the levels of obesity-related eating behaviours, including cognition of constitution, motivation for eating, eating as a diversion, feeling of satiety, eating style, meal contents and temporal eating patterns. The Japanese version of the Morningness-Eveningness (ME) questionnaire was used to measure self-rated preference for the degree to which people prefer to be active in the morning or the evening (ME). The scores for meal contents and temporal eating patterns in rotating shift workers were significantly higher than those in day workers. The ME score of rotating shift workers was significantly lower, indicating greater eveningness/less morningness among rotating shift workers. Multivariate linear regression revealed that the ME score was significantly negatively associated with temporal eating patterns and showed a negative association with the score for meal contents at a trend level, while current work shift was not significantly correlated with the scores. These results suggest that eating behaviours for rotating shift workers are associated with a more unbalanced diet and abnormal temporal eating patterns and that the associations may be explained by diurnal preference rather than by rotating shift work. Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://www.bmj.com/company/products-services/rights-and-licensing/.

Shoot water relations of mature black spruce families displaying a genotype × environment interaction in growth rate. III. Diurnal patterns as influenced by vapor pressure deficit and internal water status

Treesearch

John E. Major; Kurt H. Johnsen

2001-01-01

Pressure­volume curves were constructed and shoot water potentials measured for +20-year-old black spruce (Picea mariana (Mill.) BSP) trees from four full-sib families growing on a moist site and a dry site at the Petawawa Research Forest, Ontario, to determine whether differences in diurnal water relations traits were related to productivity. To...

DIEL OXYGEN-INDUCED MOVEMENT OF FISH ASSEMBLAGES IN A GREAT LAKES COASTAL WETLAND

EPA Science Inventory

To determine the importance of dissolved oxygen conditions in influencing daily ovement patterns of fishes in Great Lakes coastal wetlands, we sampled migrating fish assemblages from habitats with varying diurnal dissolved oxygen patterns in a Lake Superior coastal wetland during...

Diurnal pattern in nitrous oxide emissions from a sewage-enriched river.

PubMed

Xia, Yongqiu; Li, Yuefei; Li, Xiaobo; Guo, Miao; She, Dongli; Yan, Xiaoyuan

2013-07-01

Estimates of N2O emission based on limit measurements could be highly inaccurate because of considerable diurnal variations in N2O flux due to rapid transformation of nutrients and diel change of dissolved oxygen (DO). In the present study, the N2O fluxes, dissolved N2O concentrations, and the controlling variables were measured hourly for 3d and night cycles at five sites on a typically sewage-enriched river in the Taihu region. There were no significant diurnal patterns in N2O emissions and dissolved N2O saturation, with respective mean value of 56.1μg N2O-Nm(-2)h(-1) (range=41.1μg N2O-Nm(-2)h(-1) to 87.7μg N2O-Nm(-2)h(-1)) and 813% (range=597-1372%), though distinct diurnal patterns were observed in DO concentration and river chemistry. However, the mean N2O emissions and the mean dissolved N2O saturation during the day (61.7μgNm(-2)h(-1) for N2O fluxes and 0.52μgNL(-1) for dissolved N2O saturation) were significantly higher than those during the night (50.1μgNm(-2)h(-1)for N2O fluxes and 0.44μgNL(-1) for dissolved N2O saturation). Factors controlling the N2O flux were pH, DO, NH4(+),SO4(2-), air temperature, and water temperature. Sampling at 19:00h could well represent the daily average N2O flux at the studied river. Copyright © 2013 Elsevier Ltd. All rights reserved.

In Silico comparison between metoprolol succinate and bisoprolol on 24-hour systolic blood pressures.

PubMed

Jansson, Sven-Olof; Malm, Anders E; Lundström, Torbjörn

2014-12-01

To compare the effects of bisoprolol and metoprolol CR/ZOK (metoprolol succinate controlled release) on systolic blood pressure (bpsys) over a 24-h period in an in silico model. On the basis of the observed data from ambulatory blood pressure measurements (ABPM), a model with an appropriate distribution and correlation structure was derived for simulation of 24-h bpsys patterns during treatment with commonly studied doses, assumed to be equipotent, of bisoprolol and metoprolol CR/ZOK. Input into the simulations was aligned with the available data on the diurnal efficacy and pharmacology profiles of these substances. The validity of the model was tested in a bootstrap model. The simulation model reproduced the observed data with high congruence (p = 1.0). The mean 24-h bpsys values did not significantly differ between the two simulated groups (estimated overall change in bpsys [∆bpsys] for metoprolol versus bisoprolol = 2.7 mmHg [95% confidence interval -0.3 to 5.7 mmHg]; p = 0.08). There were clear diurnal differences, with bisoprolol being more effective earlier and metoprolol CR/ZOK being more effective later in the 24-h day. A validity test with 100 repeated samples gave an overall mean group difference of 1.4 ± 3.59 mmHg (p = 0.63 relative to simulation). In a robust model for the simulation of 24-h ABPM, comparisons between bisoprolol and metoprolol CR/ZOK indicate a comparable overall blood pressure-lowering effect but different diurnal patterns, consistent with the pharmacokinetics of the two drugs. This difference may be of clinical relevance, given the recognized diurnal pattern of cardiovascular events.

Patterns in diurnal airspace use by migratory landbirds along an ecological barrier.

PubMed

Peterson, Anna C; Niemi, Gerald J; Johnson, Douglas H

2015-04-01

Migratory bird populations and survival are affected by conditions experienced during migration. While many studies and conservation and management efforts focus on terrestrial stoppage and staging areas, the aerial environment through which migrants move also is subjected to anthropogenic impacts with potential consequences to migratory movement and survival. During autumn migration, the northern coastline of Lake Superior acts as an ecological barrier for many landbirds migrating out of the boreal forests of North America. From 24 observation points, we assessed the diurnal movements of birds throughout autumn migration, 2008-2010, within a 210 × 10 km coastal region along the northern coast of Lake Superior. Several raptor species showed patterns in airspace associated with topographic features such as proximity to the coastline and presence of ridgelines. Funneling movement, commonly used to describe the concentration of raptors along a migratory diversion line that either prevents or enhances migration progress, occurred only for Bald and Golden Eagles. This suggests a "leaky" migration funnel for most migratory raptors (e.g., migrating birds exiting the purported migration corridor). Passerines migrating during the late season showed more spatial and temporal structure in airspace distribution than raptors did, including funneling and an association with airspace near the coast. We conclude that (1) the diurnal use of airspace by many migratory landbirds is patterned in space and time, (2) autumn count sites situated along ecological barriers substantially underestimate the number of raptors due to "leakage" out of these concentration areas, and (3) the magnitude and structure of diurnal passerine movements in airspace have been overlooked. The heavy and structured use of airspace by migratory landbirds, especially the airspace associated with anthropogenic development (e.g., buildings, towers, turbines) necessitates a shift in focus to airspace management and conservation attention for these animals.

Patterns in diurnal airspace use by migratory landbirds along an ecological barrier

USGS Publications Warehouse

Peterson, Anna C.; Niemi, Gerald J.; Johnson, Douglas H.

2015-01-01

Migratory bird populations and survival are affected by conditions experienced during migration. While many studies and conservation and management efforts focus on terrestrial stoppage and staging areas, the aerial environment through which migrants move also is subjected to anthropogenic impacts with potential consequences to migratory movement and survival. During autumn migration, the northern coastline of Lake Superior acts as an ecological barrier for many landbirds migrating out of the boreal forests of North America. From 24 observation points, we assessed the diurnal movements of birds throughout autumn migration, 2008-2010, within a 210 km by 10 km coastal region along the northern coast of Lake Superior. Several raptor species showed patterns in airspace associated with topographic features such as proximity to the coastline and presence of ridgelines. Funneling movement, commonly used to describe the concentration of raptors along a migratory diversion line that either prevents or enhances migration progress, occurred only for Bald and Golden Eagles. This suggests a "leaky" migration funnel for most migratory raptors (e.g., migrating birds exiting the purported migration corridor). Passerines migrating during the late season showed more spatial and temporal structure in airspace distribution than raptors, including funneling and an association with airspace near the coast. We conclude that a) the diurnal use of airspace by many migratory landbirds is patterned in space and time, b) autumn count sites situated along ecological barriers substantially underestimate the number of raptors due to 'leakage' out of these concentration areas, and c) the magnitude and structure of diurnal passerine movements in airspace have been overlooked. The heavy and structured use of airspace by migratory landbirds, especially the airspace associated with anthropogenic development (e.g., buildings, towers, turbines) necessitates a shift in focus to airspace management and conservation attention for these animals.

Tidal dynamics of the Terminos Lagoon, Mexico: observations and 3D numerical modelling

NASA Astrophysics Data System (ADS)

Contreras Ruiz Esparza, Adolfo; Douillet, Pascal; Zavala-Hidalgo, Jorge

2014-09-01

The tidal circulation patterns in the Terminos Lagoon were studied based on the analysis of 1 year of measurements and numerical simulations using a baroclinic 3D hydrodynamic model, the MARS3D. A gauging network was installed consisting of six self-recording pressure-temperature sensors, a tide gauge station and two current profilers, with pressure and temperature sensors moored in the main lagoon inlets. Model simulations were validated against current and sea level observations and were used to analyse the circulation patterns caused by the tidal forcing. The numerical model was forced with eight harmonic components, four diurnal ( K 1, O 1, P 1, Q 1) and four semi-diurnal ( M 2, S 2, N 2, K 2), extracted from the TPX0.7 database. The tidal patterns in the study area vary from mixed, mainly diurnal in the two main inlets of the lagoon, to diurnal in its interior. The tidal residual circulation inside the lagoon is dominated by a cyclonic gyre. The results indicate a net flux from the southwest Ciudad del Carmen inlet (CdC) towards the northeast Puerto Real inlet (PtR) along the southern side of the lagoon and the opposite in the northern side. The results indicate two areas of strong currents in the vicinity of the inlets and weak currents inside the lagoon. The area of strong currents in the vicinity of the CdC inlet is larger than that observed in the PtR inlet. Nevertheless, the current analysis indicates that the highest current speeds, which can reach a magnitude of 1.9 m s-1, occurred in PtR. A further analysis of the tide distortion in the inlets revealed that both passages are ebb dominated.

The diurnal patterns of cortisol and dehydroepiandrosterone in relation to intense aerobic exercise in recreationally trained soccer players.

PubMed

Labsy, Z; Prieur, F; Le Panse, B; Do, M C; Gagey, O; Lasne, F; Collomp, K

2013-03-01

Diurnal patterns of cortisol and dehydroepiandrosterone (DHEA) secretion, the two main peripheral secretory products of the hypothalamic-pituitary-adrenal neuroendocrine stress axis, have been well characterized in rest conditions but not in relation to physical exercise. The purpose of this investigation was therefore to determine the effects of an intense 90-min aerobic exercise on the waking diurnal cortisol and DHEA cycles on three separate days [without exercise, with morning exercise (10:00-11:30 h), and with afternoon exercise (14:00-15:30 h)] in nine recreationally trained soccer players. Saliva samples were collected at awakening, 30 min after awakening, and then every 2 h from 08:00 to 22:00 h. A burst of secretory activity was found for cortisol (p < 0.01) but not for DHEA after awakening. Overall, diurnal decline for both adrenal steroids was observed on resting and exercise days under all conditions. However, there was a significant increase in salivary cortisol concentrations on the morning-exercise and afternoon-exercise days at, respectively, 12:00 h (p < 0.05) and 16:00 h (p < 0.01), versus the other trials. This acute response to exercise was not evident for DHEA. The results of this investigation indicate that 90 min of intense aerobic exercise does not affect the circadian pattern of salivary adrenal steroids in recreationally trained athletes over a 16-h waking period, despite a transitory increase in post-exercise cortisol concentration. Further studies are necessary to determine whether these results are applicable to elite athletes or patients with cortisol or DHEA deficiency.

Individual and Day-to-Day Differences in Active Coping Predict Diurnal Cortisol Patterns among Early Adolescent Girls.

PubMed

Sladek, Michael R; Doane, Leah D; Stroud, Catherine B

2017-01-01

Prior work has identified alterations in activity of the hypothalamic-pituitary-adrenal axis as a potential mechanism underlying stress-induced emotional health problems, which disproportionately impact girls beginning in mid-adolescence. How adolescent girls differ from one another in dispositional coping tendencies and shift specific coping strategies in response to varying stressors have been theorized as important predictors of their adaptation, health, and well-being during this dynamic period of development. The goal of this study was to examine whether individual and day-to-day (within-person) differences in adolescent girls' coping responses are associated with daily patterns of hypothalamic-pituitary-adrenal axis activity, indexed by cortisol. Participants were 122 early adolescent girls (M age  = 12.39) who provided three saliva samples per day for 3 days and completed daily coping reports, as well as a standard coping survey. Participants and primary caregivers also completed objective life stress interviews. On average, girls who were more likely to respond to interpersonal stress with voluntary engagement (active) coping exhibited generally adaptive daily physiological regulation-steeper diurnal cortisol slopes, lower total diurnal cortisol output, and lower cortisol awakening responses. Chronic interpersonal stress level significantly moderated these associations in different ways for two distinct components of the diurnal pattern-the slope and cortisol awakening responses. Regarding within-person differences, using active coping more than usual was associated with higher waking cortisol the following morning, which may help to prepare adolescent girls for perceived daily demands. These findings highlight the interactive influence of stress and coping in the prediction of daily hypothalamic-pituitary-adrenal axis activity and support the stress-buffering role of active coping for adolescent girls.

Carbon Metabolism in Two Species of Pereskia (Cactaceae) 1

PubMed Central

Rayder, Lisa; Ting, Irwin P.

1981-01-01

The Pereskia are morphologically primitive, leafed members of the Cactaceae. Gas exchange characteristics using a dual isotope porometer to monitor 14CO2 and tritiated water uptake, diurnal malic acid fluctuations, phosphoenolpyruvate carboxylase, and malate dehydrogenase activities were examined in two species of the genus Pereskia, Pereskia grandifolia and Pereskia aculeata. Investigations were done on well watered (control) and water-stressed plants. Nonstressed plants showed a CO2 uptake pattern indicating C3 carbon metabolism. However, diurnal fluctuations in titratable acidity were observed similar to Crassulacean acid metabolism. Plants exposed to 10 days of water stress exhibited stomatal opening only during an early morning period. Titratable acidity, phosphoenolpyruvate carboxylase activity, and malate dehydrogenase activity fluctuations were magnified in the stressed plants, but showed the same diurnal pattern as controls. Water stress causes these cacti to shift to an internal CO2 recycling (“idling”) that has all attributes of Crassulacean acid metabolism except nocturnal stomata opening and CO2 uptake. The consequences of this shift, which has been observed in other succulents, are unknown, and some possibilities are suggested. PMID:16661857

Diurnal patterns of productivity of arbuscular mycorrhizal fungi revealed with the Soil Ecosystem Observatory.

PubMed

Hernandez, Rebecca R; Allen, Michael F

2013-10-01

Arbuscular mycorrhizal (AM) fungi are the most abundant plant symbiont and a major pathway of carbon sequestration in soils. However, their basic biology, including their activity throughout a 24-h day : night cycle, remains unknown. We employed the in situ Soil Ecosystem Observatory to quantify the rates of diurnal growth, dieback and net productivity of extra-radical AM fungi. AM fungal hyphae showed significantly different rates of growth and dieback over a period of 24 h and paralleled the circadian-driven photosynthetic oscillations observed in plants. The greatest rates (and incidences) of growth and dieback occurred between noon and 18:00 h. Growth and dieback events often occurred simultaneously and were tightly coupled with soil temperature and moisture, suggesting a rapid acclimation of the external phase of AM fungi to the immediate environment. Changes in the environmental conditions and variability of the mycorrhizosphere may alter the diurnal patterns of productivity of AM fungi, thereby modifying soil carbon sequestration, nutrient cycling and host plant success. © 2013 The Authors. New Phytologist © 2013 New Phytologist Trust.

Diurnal patterns of productivity of arbuscular mycorrhizal fungi revealed with the Soil Ecosystem Observatory

PubMed Central

Hernandez, Rebecca R; Allen, Michael F

2013-01-01

Arbuscular mycorrhizal (AM) fungi are the most abundant plant symbiont and a major pathway of carbon sequestration in soils. However, their basic biology, including their activity throughout a 24-h day : night cycle, remains unknown. We employed the in situ Soil Ecosystem Observatory to quantify the rates of diurnal growth, dieback and net productivity of extra-radical AM fungi. AM fungal hyphae showed significantly different rates of growth and dieback over a period of 24 h and paralleled the circadian-driven photosynthetic oscillations observed in plants. The greatest rates (and incidences) of growth and dieback occurred between noon and 18:00 h. Growth and dieback events often occurred simultaneously and were tightly coupled with soil temperature and moisture, suggesting a rapid acclimation of the external phase of AM fungi to the immediate environment. Changes in the environmental conditions and variability of the mycorrhizosphere may alter the diurnal patterns of productivity of AM fungi, thereby modifying soil carbon sequestration, nutrient cycling and host plant success. PMID:23844990

Link between light-triggered Mg-banding and chamber formation in the planktic foraminifera Neogloboquadrina dutertrei

DOE PAGES

Fehrenbacher, Jennifer S.; Russell, Ann D.; Davis, Catherine V.; ...

2017-05-15

Mg/Ca ratios of planktic foraminifera are commonly used to reconstruct past ocean temperatures. However, intrashell Mg/Ca ratios exhibit a pattern of alternating high and low Mg-bands in many species. Whereas mechanisms controlling Mg variability are poorly constrained, recent experiments demonstrate that it is paced by the diurnal light/dark cycle in Orbulina universa, which forms a terminal shell of simple spherical geometry. It is unknown whether Mg-heterogeneity is diurnally paced in species with complex shell morphologies, or is the result of growth processes. Here, we show that high Mg/Ca-calcite also forms at night in cultured specimens of the multi-chambered planktic foraminiferamore » Neogloboquadrina dutertrei. Our results demonstrate that N. dutertrei adds a significant amount of calcite, and nearly all Mg-bands, after the final chamber forms. Furthermore, these results have implications for interpreting patterns of calcification in N. dutertrei, and possibly other foraminifera species, and suggests diurnal Mg-banding is an intrinsic component of biomineralization in planktic foraminifera.« less

The Antarctic Krill Euphausia superba Shows Diurnal Cycles of Transcription under Natural Conditions

PubMed Central

Albiero, Alessandro; Sales, Gabriele; Millino, Caterina; Mazzotta, Gabriella M.; Bertolucci, Cristiano; Costa, Rodolfo

2013-01-01

Background Polar environments are characterized by extreme seasonal changes in day length, light intensity and spectrum, the extent of sea ice during the winter, and food availability. A key species of the Southern Ocean ecosystem, the Antarctic krill (Euphausia superba) has evolved rhythmic physiological and behavioral mechanisms to adapt to daily and seasonal changes. The molecular organization of the clockwork underlying these biological rhythms is, nevertheless, still only partially understood. Methodology/Principal Findings The genome sequence of the Antarctic krill is not yet available. A normalized cDNA library was produced and pyrosequenced in the attempt to identify large numbers of transcripts. All available E. superba sequences were then assembled to create the most complete existing oligonucleotide microarray platform with a total of 32,217 probes. Gene expression signatures of specimens collected in the Ross Sea at five different time points over a 24-hour cycle were defined, and 1,308 genes differentially expressed were identified. Of the corresponding transcripts, 609 showed a significant sinusoidal expression pattern; about 40% of these exibithed a 24-hour periodicity while the other 60% was characterized by a shorter (about 12-hour) rhythm. We assigned the differentially expressed genes to functional categories and noticed that those concerning translation, proteolysis, energy and metabolic process, redox regulation, visual transduction and stress response, which are most likely related to daily environmental changes, were significantly enriched. Two transcripts of peroxiredoxin, thought to represent the ancestral timekeeping system that evolved about 2.5 billion years ago, were also identified as were two isoforms of the EsRh1 opsin and two novel arrestin1 sequences involved in the visual transduction cascade. Conclusions Our work represents the first characterization of the krill diurnal transcriptome under natural conditions and provides a first insight into the genetic regulation of physiological changes, which occur around the clock during an Antarctic summer day. PMID:23874706

Diurnal pattern of sodium excretion in dogs with and without chronically reduced renal perfusion pressure.

PubMed

Corea, M; Seeliger, E; Boemke, W; Reinhardt, H W

1996-01-01

In 5 conscious dogs the diurnal patterns of urinary sodium excretion (UNaV) were investigated, initially during 1 control day and, thereafter, during 4 days of servo-controlled reduction of renal perfusion pressure (rRPP). The individual dog's mean arterial blood pressure was reduced to 80% of the blood pressure on the control day. This value was always found to be below the threshold for the pressure-dependent renin release. During the entire study period urine was collected in 4-hour intervals and blood samples were taken every 4 h. The dogs were kept on a standardized high sodium and high water intake and were fed once daily at 8.30 h. On the control day, UNaV, urinary flow rate (UV), fractional lithium excretion (FELi) and fractional sodium excretion (FENa) had similar diurnal patterns. They peaked 4-8 h after food intake and decreased to low values during the night. On day 1 of rRPP, UNaV and FENa were maintained at very low levels in all collection periods, whereas the patterns of UV and FELi were unaltered compared with the patterns on the control day. On days 2-4 of rRPP, a clear-cut maximum in the patterns of UNaV and FENa recurred, comparable with the patterns on the control day. However, compared with the control day this maximum was shifted by 4 h towards the night. In contrast, the patterns of UV and FELi remained unchanged compared with the control day. The results indicate that UNaV has a typical time course in conscious, sodium- and water-replete dogs fed once daily. Endogenous stimulation of sodium reabsorption by means of rRPP results in a characteristic 4-hour shift of UNaV and FENa towards the night during rRPP days 2-4. This delay in UNaV seems to be evoked by processes in the distal tubule.

Patterns of salivary cortisol levels can manifest work stress in emergency care providers.

PubMed

Nakajima, Yasushi; Takahashi, Takayuki; Shetty, Vivek; Yamaguchi, Masaki

2012-05-01

To develop objective assessments of work fatigue, we investigated the patterns of changes in salivary cortisol levels in emergency care providers working extended work shifts. Fourteen subjects, comprising seven physicians and seven physician assistants, provided unstimulated saliva samples at regular intervals over the course of a 24-h work shift and over their subsequent free day. There was a significant time effect, with early morning cortisol levels being significantly attenuated following the work shift. Native diurnal variations varied by gender, with the female subjects manifesting greater cortisol levels. Physicians also had higher cortisol profiles even though their wake-rest cycles were similar to those of the physician assistants. Our results suggest that temporal changes, as well as diurnal similarities, in the salivary cortisol patterns can reflect work-related stress and recovery. In particular, early morning cortisol levels may manifest individual reactivity to work stressors as well as sleep deprivation.

Does high diurnal variability in a reef flat from Ofu, American Samoa confer resistance to ocean acidification?

NASA Astrophysics Data System (ADS)

Koweek, D.; Samuel, L.; Mucciarone, D. A.; Woodson, C. B.; Monismith, S. G.; Dunbar, R. B.

2012-12-01

Forecasts for coral reefs under various ocean acidification scenarios are becoming increasingly complex due to significant inter-site variability in biogeochemistry, ecology, and physical oceanography. The reef flats of Ofu, American Samoa are a potential end-member of this vulnerability spectrum due to extremely high diurnal variability in their biogeochemistry. Here we present coupled biogeochemical and physical oceanographic measurements from a shallow reef flat on Ofu in November 2011. We observed diurnal temperature ranges of up to 7°C, along with diurnal pH and dissolved oxygen ranges of 0.6 units, and 160 percent of saturation, respectively. Carbon system measurements were less extreme. Alkalinity varied between 2240-2360 μmol/kg and total dissolved inorganic carbon (TDIC) ranged between 1850-2100 μmol/kg during the diurnal cycle. These observations suggest diurnal ranges of ~240ppm CO2 and 1.5 units of ΩAr. The larger diurnal range in TDIC relative to alkalinity suggests a reef environment dominated by photosynthesis. From these observations, we explore the balance between the dominant biogeochemical processes of production and calcification on the reef flat in more detail, along with its implication for conferring resistance to ocean acidification. We use calcification rate estimates to provide insight to patterns of day and night growth and/or dissolution on the reef. Finally, we present evidence of tidal modulation of the biogeochemical signals and discuss the role of localized physical circulation in helping to determine a reef's vulnerability to ocean acidification.

Diurnal cortisol rhythms, fatigue and psychosocial factors in five-year survivors of ovarian cancer.

PubMed

Cuneo, Michaela G; Schrepf, Andrew; Slavich, George M; Thaker, Premal H; Goodheart, Michael; Bender, David; Cole, Steve W; Sood, Anil K; Lutgendorf, Susan K

2017-10-01

Fatigue is a challenge in ovarian cancer survivorship and greatly impacts quality of life. In other cancer populations, fatigue has been associated with abnormal diurnal cortisol patterns. However, little is known about biological and behavioral factors in 5+-year ovarian cancer survivors and potential mechanisms underlying persistent fatigue have not been investigated in this population. Moreover, relationships between neuroendocrine and psychosocial factors in 5+-year ovarian cancer survivors have not been studied. We addressed these issues by examining relationships between diurnal cortisol rhythms, fatigue, life stress, and social support in 30 survivors of ovarian cancer who were assessed at least 5 years (mean=6.20years) following their primary diagnosis. Flatter diurnal cortisol slopes were associated with higher levels of fatigue, suggesting a role for HPA-axis dysregulation in sustained fatigue experienced by survivors. Moreover, greater cumulative lifetime stressor exposure (p=0.023) and stressor severity (p=0.004) were associated with flatter diurnal cortisol slopes, while higher social attachment (p=0.001) was associated with steeper diurnal cortisol slopes. These findings suggest that ovarian cancer survivors with greater lifetime stress exposure or lower social attachment may be at increased risk for circadian rhythm disruption, which in turn is associated with fatigue. Future research should examine relationships of clinical stage and inflammatory cytokines to cortisol rhythms and fatigue in long-term ovarian cancer survivors, as well as investigating the clinical significance of abnormal diurnal cortisol profiles in this population. Copyright © 2017 Elsevier Ltd. All rights reserved.

Verifying Diurnal Variations of Global Precipitation in Three New Global Reanalyses

NASA Astrophysics Data System (ADS)

Wu, S.; Xie, P.; Sun, F.; Joyce, R.

2013-12-01

Diurnal variations of global precipitation and their representation in three sets of new generation global reanalyses are examined using the reprocessed and bias corrected CMORPH satellite precipitation estimates. The CMORPH satellite precipitation estimates are produced on an 8km by 8km grid over the globe (60oS-60oN) and in a 30-min interval covering a 15-year period from 1998 to the present through combining information from IR and PMW observations from all available satellites. Bias correction is performed for the raw CMORPH precipitation estimates through calibration against an gauge-based analysis over land and against the pentad GPCP analysis over ocean. The reanalyses examined here include the NCEP CFS reanalysis (CFSR), NASA/GSFC MERRA, and ECMWF Interim. The bias-corrected CMORPH is integrated from its original resolution to the reanalyses grid systems to facilitate the verification. First, quantitative agreements between the reanalysis precipitation fields and the CMORPH satellite observation are examined over the global domain. Precipitation structures associated with the large-scale topography are well reproduced when compared against the observation. Evolution of precipitation patterns with the development of transient weather systems are captured by the CFSR and two other reanalyses. The reanalyses tend to generate precipitation fields with wider raining areas and reduced intensity for heavy rainfall cases compared the observations over both land and ocean. Seasonal migration of global precipitation depicted in the 15-year CMORPH satellite observations is very well captured by the three sets of new reanalyses, although magnitude of precipitation is larger, especially in the CFSR, compared to that in the observations. In general, the three sets of new reanalyses exhibit substantial improvements in their performance to represent global precipitation distributions and variations. In particular, the new reanalyses produced precipitation variations of fine time/space scales collated in the observations. The diurnal cycle of the precipitation is reasonably well reproduced by the reanalyses over many global oceanic and land areas. Diurnal amplitude of the reanalyses precipitation, defined as the standard deviation of the 24 hourly mean values, is smaller than that in the observations over most of the oceanic regions, attributable largely to the continuous weak precipitation throughout the diurnal cycle in all of the three reanalyses. Over ocean, the pattern of diurnal variations of precipitation in the reanalyses is quite similar to that in the observations, with the timing of maximum precipitation shifted by1-3 hours. Over land especially over Africa, the reanalyses tend to produce maximum precipitation around noon, much earlier than that in the observations. Particularly noticeable is the diurnal cycle of warm season precipitation over CONUS in association with the eastward propagation of meso-scale systems distinct in the observations. None of the three new reanalyses are capable of detecting this pattern of diurnal variations. A comprehensive description and diagnostic discussions will be given at the AGU meeting.

Chronotype, sleep loss, and diurnal pattern of salivary cortisol in a simulated daylong driving.

PubMed

Oginska, Halszka; Fafrowicz, Magdalena; Golonka, Krystyna; Marek, Tadeusz; Mojsa-Kaja, Justyna; Tucholska, Kinga

2010-07-01

The study focused on chronotype-related differences in subjective load assessment, sleepiness, and salivary cortisol pattern in subjects performing daylong simulated driving. Individual differences in work stress appraisal and psychobiological cost of prolonged load seem to be of importance in view of expanding compressed working time schedules. Twenty-one healthy, male volunteers (mean +/- SD: 27.9 +/- 4.9 yrs) were required to stay in semiconstant routine conditions. They performed four sessions (each lasting approximately 2.5 h) of simulated driving, i.e., completed chosen tasks from computer driving games. Saliva samples were collected after each driving session, i.e., at 10:00-11:00, 14:00-15:00, 18:00-19:00, and 22:00-23:00 h as well as 10-30 min after waking (between 05:00 and 06:00 h) and at bedtime (after 00:00 h). Two subgroups of subjects were distinguished on the basis of the Chronotype Questionnaire: morning (M)- and evening (E)-oriented types. Subjective data on sleep need, sleeping time preferences, sleeping problems, and the details of the preceding night were investigated by questionnaire. Subjective measures of task load (NASA Task Load Index [NASA-TLX]), activation (Thayer's Activation-Deactivation Adjective Check List [AD ACL]), and sleepiness (Karolinska Sleepiness Scale [KSS]) were applied at times of saliva samples collection. M- and E-oriented types differed significantly as to their ideal sleep length (6 h 54 min +/- 44 versus 8 h 13 min +/- 50 min), preferred sleep timing (midpoint at 03:19 versus 04:26), and sleep index, i.e., 'real-to-ideal' sleep ratio, before the experimental day (0.88 versus 0.67). Sleep deficit proved to be integrated with eveningness. M and E types exhibited similar diurnal profiles of energy, tiredness, tension, and calmness assessed by AD ACL, but E types estimated higher their workload (NASA-TLX) and sleepiness (KSS). M types exhibited a trend of higher mean cortisol levels than E types (F = 4.192, p < .056) and distinct diurnal variation (F = 2.950, p < .019), whereas E types showed a flattened diurnal curve. Cortisol values did not correlate with subjective assessments of workload, arousal, or sleepiness at any time-of-day. Diurnal cortisol pattern parameters (i.e., morning level, mean level, and range of diurnal changes) showed significant positive correlations with sleep length before the experiment (r = .48, .54, and .53, respectively) and with sleep index (r = .63, .64, and .56, respectively). The conclusions of this study are: (i) E-oriented types showed lower salivary cortisol levels and a flattened diurnal curve in comparison with M types; (ii) sleep loss was associated with lower morning cortisol and mean diurnal level, whereas higher cortisol levels were observed in rested individuals. In the context of stress theory, it may be hypothesized that rested subjects perceived the driving task as a challenge, whereas those with reduced sleep were not challenged, but bored/exhausted with the experimental situation.

Diurnal and seasonal variations in surface methane at a tropical coastal station: Role of mesoscale meteorology.

PubMed

Kavitha, M; Nair, Prabha R; Girach, I A; Aneesh, S; Sijikumar, S; Renju, R

2018-08-01

In view of the large uncertainties in the methane (CH 4 ) emission estimates and the large spatial gaps in its measurements, studies on near-surface CH 4 on regional basis become highly relevant. This paper presents the first time observational results of a study on the impacts of mesoscale meteorology on the temporal variations of near-surface CH 4 at a tropical coastal station, in India. It is based on the in-situ measurements conducted during January 2014 to August 2016, using an on-line CH 4 analyzer working on the principle of gas chromatography. The diurnal variation shows a daytime low (1898-1925ppbv) and nighttime high (1936-2022ppbv) extending till early morning hours. These changes are closely associated with the mesoscale circulations, namely Sea Breeze (SB) and Land Breeze (LB), as obtained through the meteorological observations, WRF simulations of the circulations and the diurnal variation of boundary layer height as observed by the Microwave Radiometer Profiler. The diurnal enhancement always coincides with the onset of LB. Several cases of different onset timings of LB were examined and results presented. The CH 4 mixing ratio also exhibits significant seasonal patterns being maximum in winter and minimum in pre-monsoon/monsoon with significant inter-annual variations, which is also reflected in diurnal patterns, and are associated with changing synoptic meteorology. This paper also presents an analysis of in-situ measured near-surface CH 4 , column averaged and upper tropospheric CH 4 retrieved by Atmospheric Infrared Sounder (AIRS) onboard Earth Observing System (EOS)/Aqua which gives insight into the vertical distribution of the CH 4 over the location. An attempt is also made to estimate the instantaneous radiative forcing for the measured CH 4 mixing ratio. Copyright © 2018 Elsevier B.V. All rights reserved.

The impact of sampling, PCR, and sequencing replication on discerning changes in drinking water bacterial community over diurnal time-scales.

PubMed

Bautista-de Los Santos, Quyen Melina; Schroeder, Joanna L; Blakemore, Oliver; Moses, Jonathan; Haffey, Mark; Sloan, William; Pinto, Ameet J

2016-03-01

High-throughput and deep DNA sequencing, particularly amplicon sequencing, is being increasingly utilized to reveal spatial and temporal dynamics of bacterial communities in drinking water systems. Whilst the sampling and methodological biases associated with PCR and sequencing have been studied in other environments, they have not been quantified for drinking water. These biases are likely to have the greatest effect on the ability to characterize subtle spatio-temporal patterns influenced by process/environmental conditions. In such cases, intra-sample variability may swamp any underlying small, systematic variation. To evaluate this, we undertook a study with replication at multiple levels including sampling sites, sample collection, PCR amplification, and high throughput sequencing of 16S rRNA amplicons. The variability inherent to the PCR amplification and sequencing steps is significant enough to mask differences between bacterial communities from replicate samples. This was largely driven by greater variability in detection of rare bacteria (relative abundance <0.01%) across PCR/sequencing replicates as compared to replicate samples. Despite this, we captured significant changes in bacterial community over diurnal time-scales and find that the extent and pattern of diurnal changes is specific to each sampling location. Further, we find diurnal changes in bacterial community arise due to differences in the presence/absence of the low abundance bacteria and changes in the relative abundance of dominant bacteria. Finally, we show that bacterial community composition is significantly different across sampling sites for time-periods during which there are typically rapid changes in water use. This suggests hydraulic changes (driven by changes in water demand) contribute to shaping the bacterial community in bulk drinking water over diurnal time-scales. Copyright © 2015 Elsevier Ltd. All rights reserved.

Diurnal periodicity of assimilate transport shapes resource allocation and whole-plant carbon balance.

PubMed

Brauner, Katrin; Birami, Benjamin; Brauner, Horst A; Heyer, Arnd G

2018-06-01

Whole-plant carbon balance comprises diurnal fluctuations of photosynthetic carbon gain and respiratory losses, as well as partitioning of assimilates between phototrophic and heterotrophic organs. Because it is difficult to access, the root system is frequently neglected in growth models, or its metabolism is rated based on generalizations from other organs. Here, whole-plant cuvettes were used for investigating total-plant carbon exchange with the environment over full diurnal cycles. Dynamics of primary metabolism and diurnally resolved phloem exudation profiles, as proxy of assimilate transport, were combined to obtain a full picture of resource allocation. This uncovered a strong impact of periodicity of inter-organ transport on the efficiency of carbon gain. While a sinusoidal fluctuation of the transport rate, with minor diel deflections, minimized respiratory losses in Arabidopsis wild-type plants, triangular or rectangular patterns of transport, found in mutants defective in either starch or sucrose metabolism, increased root respiration at the end or beginning of the day, respectively. Power spectral density and cross-correlation analysis revealed that only the rate of starch synthesis was strictly correlated to the rate of net photosynthesis in wild-type, while in a sucrose-phosphate synthase mutant (spsa1), this applied also to carboxylate synthesis, serving as an alternative carbon pool. In the starchless mutant of plastidial phospho-gluco mutase (pgm), none of these rates, but concentrations of sucrose and glucose in the root, followed the pattern of photosynthesis, indicating direct transduction of shoot sugar levels to the root. The results demonstrate that starch metabolism alone is insufficient to buffer diurnal fluctuations of carbon exchange. © 2018 The Authors The Plant Journal © 2018 John Wiley & Sons Ltd.

Diurnal Cycle of Convection and Air-Sea-Land Interaction Associated with MJO over the Maritime Continent

NASA Astrophysics Data System (ADS)

Savarin, A.; Chen, S. S.

2016-12-01

The Madden-Julian Oscillation (MJO) is a dominant mode of intraseasonal variability in the tropics. Large-scale convection fueling the MJO is initiated over the tropical Indian Ocean and propagates eastward across the Maritime Continent (MC) and into the western Pacific as a pattern of alternating phases of active and suppressed convection. As an eastward-propagating MJO convective event encounters the MC, its nature is altered due to the complex interactions with the landmass and topography as well as the warm coastal ocean. In turn, the passage of a large-scale MJO event modulates local conditions over the MC. Previous studies have shown a strong and distinct diurnal cycle of convection over the land and nearby ocean, with an afternoon maximum over land, and a morning maximum over water. These complex interactions are still not well understood. This study aims to improve our understanding on how the resolution of distinct topographic features affects the diurnal cycle of convection in the active and suppressed MJO regimes. We use the Unified Wave Interface - a Coupled Model (UWIN-CM), a fully coupled atmosphere-ocean model to examine the effects that varying model resolution has on the representation of the MJO, the diurnal cycle of convection, and their interaction. Three model simulations of the November-December 2011 MJO event were carried out with resolutions of 12-, 4-, and 1.3-km in the fully coupled setting, and verified against TRMM and DYNAMO field campaign observations. Primary results indicate that increasing model resolution provides a better representation of the MC topography that not only improves the pattern of the diurnal cycle of convection over land. It also increases the amount of precipitation over water to values comparable to TRMM, possibly aiding the MJO's eastward propagation as shown in observational studies.

Diurnal patterns of salivary cortisol and DHEA using a novel collection device: electronic monitoring confirms accurate recording of collection time using this device.

PubMed

Laudenslager, Mark L; Calderone, Jacqueline; Philips, Sam; Natvig, Crystal; Carlson, Nichole E

2013-09-01

The accurate indication of saliva collection time is important for defining the diurnal decline in salivary cortisol as well as characterizing the cortisol awakening response. We tested a convenient and novel collection device for collecting saliva on strips of filter paper in a specially constructed booklet for determination of both cortisol and DHEA. In the present study, 31 healthy adults (mean age 43.5 years) collected saliva samples four times a day on three consecutive days using filter paper collection devices (Saliva Procurement and Integrated Testing (SPIT) booklet) which were maintained during the collection period in a large plastic bottle with an electronic monitoring cap. Subjects were asked to collect saliva samples at awakening, 30 min after awakening, before lunch and 600 min after awakening. The time of awakening and the time of collection before lunch were allowed to vary by each subjects' schedule. A reliable relationship was observed between the time recorded by the subject directly on the booklet and the time recorded by electronic collection device (n=286 observations; r(2)=0.98). However, subjects did not consistently collect the saliva samples at the two specific times requested, 30 and 600 min after awakening. Both cortisol and DHEA revealed diurnal declines. In spite of variance in collection times at 30 min and 600 min after awakening, the slope of the diurnal decline in both salivary cortisol and DHEA was similar when we compared collection tolerances of ±7.5 and ±15 min for each steroid. These unique collection booklets proved to be a reliable method for recording collection times by subjects as well as for estimating diurnal salivary cortisol and DHEA patterns. Copyright © 2013 Elsevier Ltd. All rights reserved.

Changes in neuropeptide Y immunoreactivity and transcript levels in circadian system structures of the diurnal rodent, the thirteen-lined ground squirrel

PubMed Central

Vidal, Luis; Lugo, Nidza

2007-01-01

The intergeniculate leaflet (IGL) and its neuropeptide Y (NPY) projection to the main circadian clock, the suprachiasmatic nucleus (SCN), have been the focus of extensive research conducted, for the most part, on nocturnal rodent species. However, a variety of anatomical and physiological differences between the circadian system of diurnal and nocturnal species have been reported. These differences led us to question whether the role of NPY in the circadian system of the diurnal ground squirrel differs from that in nocturnal rodents. We used semi-quantitative immunohistochemistry to analyze NPY content in SCN terminals of squirrels sacrificed at specific times of the day and compared the data to previous published results from the rat. Additionally, NPY mRNA was quantified using real-time PCR to determine if varying NPY-immunoreactivity (-ir) levels could be the result of changes in peptide transcription. Our results demonstrate that NPY-ir levels in the ground squirrel SCN peak during the middle of the night unlike what is observed in the rat. Cell counts of NPY-ir neurons in the IGL revealed a pattern of variation 6 hr out of phase compared to what was observed in the SCN. NPY mRNA levels showed only one sharp increase in the middle of the night, coinciding with increases in NPY-ir levels observed in the SCN. Differences in the pattern of fluctuation of NPY in the SCN between the rat and squirrel suggest that this peptide may serve distinct roles in the circadian system of diurnal and nocturnal species. Our data provide the first evidence of the relationship between transcript and peptide levels in the circadian system of a diurnal species. PMID:17109825

Diurnal patterns of salivary cortisol and DHEA using a novel collection device: Electronic monitoring confirms accurate recording of collection time using this device

PubMed Central

Laudenslager, Mark L.; Calderone, Jacqueline; Philips, Sam; Natvig, Crystal; Carlson, Nichole E.

2013-01-01

The accurate indication of saliva collection time is important for defining the diurnal decline in salivary cortisol as well as characterizing the cortisol awakening response.. We tested a convenient and novel collection device for collecting saliva on strips of filter paper in a specially constructed booklet for determination of both cortisol and DHEA. In the present study, 31 healthy adults (mean age 43.5 yrs.) collected saliva samples four times a day on three consecutive days using filter paper collection devices (Saliva Procurement and Integrated Testing (SPIT) booklet) which were maintained during the collection period in a large plastic bottle with an electronic monitoring cap. Subjects were asked to collect saliva samples at awakening, 30 min. after awakening, before lunch and 600 min. after awakening. The time of awakening and the time of collection before lunch were allowed to vary by each subjects’ schedule. A reliable relationship was observed between the time recorded by the subject directly on the booklet and the time recorded by electronic collection device (n = 286 observations; r2 = 0.98). However, subjects did not consistently collect the saliva samples at the two specific times requested, 30 and 600 min. after awakening. Both cortisol and DHEA revealed diurnal declines.. In spite of variance in collection times at 30 min. and 600 min. after awakening, the slope of the diurnal decline in both salivary cortisol and DHEA were similar when we compared collection tolerances of ± 7.5 and ± 15 min. for each steroid.. These unique collection booklets proved to be a reliable method for recording collection times by subjects as well as for estimating diurnal salivary cortisol and DHEA patterns. PMID:23490073

Wheel running improves REM sleep and attenuates stress-induced flattening of diurnal rhythms in F344 rats.

PubMed

Thompson, Robert S; Roller, Rachel; Greenwood, Benjamin N; Fleshner, Monika

2016-05-01

Regular physical activity produces resistance to the negative health consequences of stressor exposure. One way that exercise may confer stress resistance is by reducing the impact of stress on diurnal rhythms and sleep; disruptions of which contribute to stress-related disease including mood disorders. Given the link between diurnal rhythm disruptions and stress-related disorders and that exercise both promotes stress resistance and is a powerful non-photic biological entrainment cue, we tested if wheel running could reduce stress-induced disruptions of sleep/wake behavior and diurnal rhythms. Adult, male F344 rats with or without access to running wheels were instrumented for biotelemetric recording of diurnal rhythms of locomotor activity, heart rate, core body temperature (CBT), and sleep (i.e. REM, NREM, and WAKE) in the presence of a 12 h light/dark cycle. Following 6 weeks of sedentary or exercise conditions, rats were exposed to an acute stressor known to disrupt diurnal rhythms and produce behaviors associated with mood disorders. Prior to stressor exposure, exercise rats had higher CBT, more locomotor activity during the dark cycle, and greater %REM during the light cycle relative to sedentary rats. NREM and REM sleep were consolidated immediately following peak running to a greater extent in exercise, compared to sedentary rats. In response to stressor exposure, exercise rats expressed higher stress-induced hyperthermia than sedentary rats. Stressor exposure disrupted diurnal rhythms in sedentary rats; and wheel running reduced these effects. Improvements in sleep and reduced diurnal rhythm disruptions following stress could contribute to the health promoting and stress protective effects of exercise.

Wheel Running Improves REM Sleep and Attenuates Stress-induced Flattening of Diurnal Rhythms in F344 Rats

PubMed Central

Thompson, Robert S.; Roller, Rachel; Greenwood, Benjamin N.; Fleshner, Monika

2016-01-01

Regular physical activity produces resistance to the negative health consequences of stressor exposure. One way that exercise may confer stress resistance is by reducing the impact of stress on diurnal rhythms and sleep; disruptions of which contribute to stress-related disease including mood disorders. Given the link between diurnal rhythm disruptions and stress-related disorders and that exercise both promotes stress resistance and is a powerful non-photic biological entrainment cue, we tested if wheel running could reduce stress-induced disruptions of sleep/wake behavior and diurnal rhythms. Adult, male F344 rats with or without access to running wheels were instrumented for biotelemetric recording of diurnal rhythms of locomotor activity, heart rate, core body temperature (CBT), and sleep (i.e. REM, NREM, and WAKE) in the presence of a 12hr light/dark cycle. Following 6 weeks of sedentary or exercise conditions, rats were exposed to an acute stressor known to disrupt diurnal rhythms and produce behaviors associated with mood disorders. Prior to stressor exposure, exercise rats had higher CBT, more locomotor activity during the dark cycle, and greater %REM during the light cycle relative to sedentary rats. NREM and REM sleep were consolidated immediately following peak running to a greater extent in exercise, compared to sedentary rats. In response to stressor exposure, exercise rats expressed higher stress-induced hyperthermia than sedentary rats. Stressor exposure disrupted diurnal rhythms in sedentary rats; and wheel running reduced these effects. Improvements in sleep and reduced diurnal rhythm disruptions following stress could contribute to the health promoting and stress protective effects of exercise. PMID:27124542

Diurnal Dynamics of Gaseous and Dissolved Metabolites and Microbiota Composition in the Bovine Rumen

PubMed Central

van Lingen, Henk J.; Edwards, Joan E.; Vaidya, Jueeli D.; van Gastelen, Sanne; Saccenti, Edoardo; van den Bogert, Bartholomeus; Bannink, André; Smidt, Hauke; Plugge, Caroline M.; Dijkstra, Jan

2017-01-01

Diurnal patterns of ruminal fermentation metabolites and microbial communities are not commonly assessed when investigating variation in ruminal CH4 production. The aims of this study were to monitor diurnal patterns of: (i) gaseous and dissolved metabolite concentrations in the bovine rumen, (ii) H2 and CH4 emitted, and (iii) the rumen microbiota. Furthermore, the effect of dietary inclusion of linseed oil on these patterns was assessed. Four rumen cannulated multiparous cows were used in a cross-over design with two 17 days periods and two dietary treatments: a control diet and a linseed oil supplemented diet [40% maize silage, 30% grass silage, 30% concentrate on dry matter (DM) basis for both diets; fat contents of 33 vs. 56 g/kg of DM]. On day 11, rumen contents were sampled for 10 h after morning feeding to profile gaseous and dissolved metabolite concentrations and microbiota composition. H2 and CH4 emission (mass per unit of time) was measured in respiration chambers from day 13 to 17. A 100-fold increase in ruminal H2 partial pressure (contribution to the total pressure of rumen headspace gases) was observed at 0.5 h after feeding. This peak was followed by a decline to basal level. Qualitatively similar patterns after feeding were also observed for H2 and CH4 emission, ethanol and lactate concentrations, and propionate molar proportion, although the opposite pattern was seen for acetate molar proportion. Associated with these patterns, a temporal biphasic change in the microbial composition was observed as based on 16S ribosomal RNA with certain taxa specifically associated with each phase. Bacterial concentrations (log10 16S ribosomal RNA gene copies based) were affected by time, and were increased by linseed oil supplementation. Archaeal concentrations (log10 16S ribosomal RNA gene copies based) tended to be affected by time and were not affected by diet, despite linseed oil supplementation decreasing CH4 emission, tending to decrease the partial pressure of CH4, and tending to increase propionate molar proportion. Linseed oil supplementation affected microbiota composition, and was most associated with an uncultivated Bacteroidales taxon. In summary, our findings support the importance of diurnal dynamics for the understanding of VFA, H2, and CH4 production. PMID:28367142

Diurnal salivary cortisol patterns during pregnancy and after delivery: relationship to plasma corticotrophin-releasing-hormone.

PubMed

Allolio, B; Hoffmann, J; Linton, E A; Winkelmann, W; Kusche, M; Schulte, H M

1990-08-01

The circadian rhythm of salivary cortisol was studied in 10 healthy women every 4 weeks throughout pregnancy. In addition, in 12 women the diurnal patterns of salivary cortisol, serum cortisol, plasma ACTH, plasma CRH and serum progesterone were analysed in late third trimester pregnancy and again 3-5 days after delivery. Salivary cortisol profiles exhibited a clear circadian rhythm during pregnancy with an increase in mean salivary cortisol from the 25th to 28th week onwards reaching concentrations in late pregnancy more than twice as high as in non-pregnant controls, rapidly returning to normal concentrations after delivery. The coefficient of variation of salivary cortisol profiles decreased in third trimester pregnancy due to a parallel upward shift of cortisol concentrations (40.2 +/- 3.4% vs 77.6 +/- 6.6% after delivery, P less than 0.01). A diurnal pattern was also found for plasma ACTH and serum cortisol before and after delivery with lower concentrations post-partum (P less than 0.01). In late pregnancy, progesterone concentrations were significantly higher in the evening (930 +/- 85 nmol/l vs 813 +/- 74 nmol/l at 0900 h, P less than 0.01) but showed no diurnal variation post-partum. Plasma CRH was significantly elevated in late third trimester pregnancy (1.22 +/- 0.23 micrograms/l at 0900 h) but showed no diurnal change (1.30 +/- 0.28 micrograms/l at 1900 h). Moreover, no correlation between the free cortisol increase in late pregnancy and plasma CRH was noted despite a wide range of CRH levels (0.13-3.60 micrograms/l). In contrast, a significant correlation was observed between the serum progesterone increase and the salivary cortisol increase in late pregnancy (r = 0.70, P less than 0.05). These findings demonstrate that placental CRH is not the only regulator of maternal ACTH and cortisol release. Instead, our study suggests that placental CRH has little influence on baseline maternal adrenocortical function in pregnancy. The elevated salivary cortisol levels in pregnancy may be explained by glucocorticoid resistance owing to the antiglucocorticoid action of high progesterone concentrations.

Diurnal changes in the dielectric properties and water status of eastern hemlock and red spruce from Howland, ME

NASA Technical Reports Server (NTRS)

Salas, W. A.; Ranson, K. J.; Rock, B. N.; Moss, D. M.

1991-01-01

The diurnal characteristics of microwave dielectric properties and water potential of two conifer species were investigated in July and September, 1990. P-band and C-band radial dielectric profiles of hemlock and red spruce, as well as hemlock diurnal water potential and dielectric profiles, are presented. The resulting radial dielectric profiles matched the regions of the functional sapwood (water transport component of the active xylem) in both species such that the sapwood was characterized by a higher dielectric than the bark and heartwood tissues. This is probably due to characteristic differences in the water content of each tissue. As the hemlocks progressed through their diurnal water potential pattern, the dielectric profile remained static until mid-afternoon. As the tension in the water column relaxed (2 to 3 bars) the dielectric constant decreased by 30 to 40 percent. There are several possible explanations for this phenomenon, and these may relate to the dependency of the dielectric measurements on temperature, salinity, and volumetric water content.

Diurnal variations in axial length, choroidal thickness, intraocular pressure, and ocular biometrics.

PubMed

Chakraborty, Ranjay; Read, Scott A; Collins, Michael J

2011-07-11

To investigate the pattern of diurnal variations in axial length (AL), choroidal thickness, intraocular pressure (IOP), and ocular biometrics over 2 consecutive days. Measurements of ocular biometrics and IOP were collected for 30 young adult subjects (15 myopes, 15 emmetropes) at 10 different times over 2 consecutive days. Five sets of measurements were collected each day at approximately 3-hour intervals, with the first measurement taken at ~9 AM and final measurement at ~9 PM. AL underwent significant diurnal variation (P < 0.0001) that was consistently observed across the 2 measurement days. The longest AL was typically observed at the second measurement session (mean time, 12:26) and the shortest AL at the final session of each day (mean time, 21:06). The mean diurnal change in AL was 0.032 ± 0.018 mm. Choroidal thickness underwent significant diurnal variation (mean change, 0.029 ± 0.016 mm; P < 0.001) and varied approximately in antiphase to the AL changes. Significant diurnal variations were also found in vitreous chamber depth (VCD; mean change, 0.06 ± 0.029 mm; P < 0.0001) and IOP (mean change, 3.54 ± 0.84 mm Hg; P < 0.0001). A positive association was found between the variations of AL and IOP (r(2) = 0.17, P < 0.0001) and AL and VCD (r(2) = 0.31, P < 0.0001) and a negative association between AL and choroidal thickness (r(2) = 0.13, P < 0.0001). There were no significant differences in the magnitude and timing of diurnal variations associated with refractive error. Significant diurnal variations in AL, choroidal thickness, and IOP were consistently observed over 2 consecutive days of testing.

Differential regulation of duplicate light-dependent protochlorophyllide oxidoreductases in the diatom Phaeodactylum tricornutum

DOE PAGES

Hunsperger, Heather M.; Ford, Christopher J.; Miller, James S.; ...

2016-07-01

Diatoms (Bacilliariophyceae) encode two light-dependent protochlorophyllide oxidoreductases (POR1 and POR2) that catalyze the penultimate step of chlorophyll biosynthesis in the light. Algae live in dynamic environments whose changing light levels induce photoacclimative metabolic shifts, including altered cellular chlorophyll levels. We hypothesized that the two POR proteins may be differentially adaptive under varying light conditions. Using the diatom Phaeodactylum tricornutum as a test system, differences in POR protein abundance and por gene expression were examined when this organism was grown on an alternating light:dark cycles at different irradiances; exposed to continuous light; and challenged by a significant decrease in light availability.more » As a result, for cultures maintained on a 12h light: 12h dark photoperiod at 200μEm –2 s –1 ( 200L/D), both por genes were up-regulated during the light and down-regulated in the dark, though por1 transcript abundance rose and fell earlier than that of por2. Little concordance occurred between por1 mRNA and POR1 protein abundance. In contrast, por2 mRNA and POR2 protein abundances followed similar diurnal patterns. When 200L/D P. tricornutum cultures were transferred to continuous light ( 200L/L), the diurnal regulatory pattern of por1 mRNA abundance but not of por2 was disrupted, and POR1 but not POR2 protein abundance dropped steeply. Under 1200μEm –2 s –1 ( 1200L/D), both por1 mRNA and POR1 protein abundance displayed diurnal oscillations. A compromised diel por2 mRNA response under 1200L/D did not impact the oscillation in POR2 abundance. When cells grown at 1200L/D were then shifted to 50μEm –2 s –1 (50L/D), por1 and por2 mRNA levels decreased swiftly but briefly upon light reduction. Thereafter, POR1 but not POR2 protein levels rose significantly in response to this light stepdown.« less

Maternal Olfactory Cues Synchronize the Circadian System of Artificially Raised Newborn Rabbits

PubMed Central

Montúfar-Chaveznava, Rodrigo; Trejo-Muñoz, Lucero; Hernández-Campos, Oscar; Navarrete, Erika; Caldelas, Ivette

2013-01-01

In European newborn rabbits, once-daily nursing acts as a strong non-photic entraining cue for the pre-visual circadian system. Nevertheless, there is a lack of information regarding which of the non-photic cues are capable of modulating pup circadian system. In this study, for the first time, we determined that the mammary pheromone 2-methylbut-2-enal (2MB2) presented in the maternal milk acts as a non-photic entraining cue. We evaluated the effect of once-daily exposure to maternal olfactory cues on the temporal pattern of core body temperature, gross locomotor activity and metabolic variables (liver weight, serum glucose, triacylglycerides, free fatty acids, cholecystokinin and cholesterol levels) in newborn rabbits. Rabbit pups were separated from their mothers from postnatal day 1 (P1) to P8 and were randomly assigned to one of the following conditions: nursed by a lactating doe (NAT); exposed to a 3-min pulse of maternal milk (M-Milk), mammary pheromone (2MB2), or water (H2O). To eliminate maternal stimulation, the pups of the last three groups were artificially fed once every 24-h. On P8, the rabbits were sacrificed at different times of the day. In temperature and activity, the NAT, M-Milk and 2MB2 groups exhibited clear diurnal rhythmicity with a conspicuous anticipatory rise hours prior to nursing. In contrast, the H2O group exhibited atypical rhythmicity in both parameters, lacking the anticipatory component. At the metabolic level, all of the groups exhibited a diurnal pattern with similar phases in liver weight and metabolites examined. The results obtained in this study suggest that during pre-visual stages of development, the circadian system of newborn rabbits is sensitive to the maternal olfactory cues contained in milk, indicating that these cues function as non-photic entraining signals mainly for the central oscillators regulating the expression of temperature and behavior, whereas in metabolic diurnal rhythmicity, these cues lack an effect, indicating that peripheral oscillators respond to milk administration. PMID:24040161

Out of the dark: 350 million years of conservatism and evolution in diel activity patterns in vertebrates.

PubMed

Anderson, Samantha R; Wiens, John J

2017-08-01

Many animals are active only during a particular time (e.g., day vs. night), a partitioning that may have important consequences for species coexistence. An open question is the extent to which this diel activity niche is evolutionarily conserved or labile. Here, we analyze diel activity data across a phylogeny of 1914 tetrapod species. We find strong phylogenetic signal, showing that closely related species tend to share similar activity patterns. Ancestral reconstructions show that nocturnality was the most likely ancestral diel activity pattern for tetrapods and many major clades within it (e.g., amphibians, mammals). Remarkably, nocturnal activity appears to have been maintained continuously in some lineages for ∼350 million years. Thus, we show that traits involved in local-scale resource partitioning can be conserved over strikingly deep evolutionary time scales. We also demonstrate a potentially important (but often overlooked) metric of niche conservatism. Finally, we show that diurnal lineages appear to have faster speciation and diversification rates than nocturnal lineages, which may explain why there are presently more diurnal tetrapod species even though diurnality appears to have evolved more recently. Overall, our results may have implications for studies of community ecology, species richness, and the evolution of diet and communication systems. © 2017 The Author(s). Evolution © 2017 The Society for the Study of Evolution.

Rhythmic Diurnal Synthesis and Signaling of Retinoic Acid in the Rat Pineal Gland and Its Action to Rapidly Downregulate ERK Phosphorylation.

PubMed

Ashton, Anna; Stoney, Patrick N; Ransom, Jemma; McCaffery, Peter

2018-03-08

Vitamin A is important for the circadian timing system; deficiency disrupts daily rhythms in activity and clock gene expression, and reduces the nocturnal peak in melatonin in the pineal gland. However, it is currently unknown how these effects are mediated. Vitamin A primarily acts via the active metabolite, retinoic acid (RA), a transcriptional regulator with emerging non-genomic activities. We investigated whether RA is subject to diurnal variation in synthesis and signaling in the rat pineal gland. Its involvement in two key molecular rhythms in this gland was also examined: kinase activation and induction of Aanat, which encodes the rhythm-generating melatonin synthetic enzyme. We found diurnal changes in expression of several genes required for RA signaling, including a RA receptor and synthetic enzymes. The RA-responsive gene Cyp26a1 was found to change between day and night, suggesting diurnal changes in RA activity. This corresponded to changes in RA synthesis, suggesting rhythmic production of RA. Long-term RA treatment in vitro upregulated Aanat transcription, while short-term treatment had no effect. RA was also found to rapidly downregulate extracellular signal-regulated kinase (ERK) 1/2 phosphorylation, suggesting a rapid non-genomic action which may be involved in driving the molecular rhythm in ERK1/2 activation in this gland. These results demonstrate that there are diurnal changes in RA synthesis and activity in the rat pineal gland which are partially under circadian control. These may be key to the effects of vitamin A on circadian rhythms, therefore providing insight into the molecular link between this nutrient and the circadian system.

Specific Diurnal EMG Activity Pattern Observed in Occlusal Collapse Patients: Relationship between Diurnal Bruxism and Tooth Loss Progression

PubMed Central

Kawakami, Shigehisa; Kumazaki, Yohei; Manda, Yosuke; Oki, Kazuhiro; Minagi, Shogo

2014-01-01

Aim The role of parafunctional masticatory muscle activity in tooth loss has not been fully clarified. This study aimed to reveal the characteristic activity of masseter muscles in bite collapse patients while awake and asleep. Materials and Methods Six progressive bite collapse patients (PBC group), six age- and gender-matched control subjects (MC group), and six young control subjects (YC group) were enrolled. Electromyograms (EMG) of the masseter muscles were continuously recorded with an ambulatory EMG recorder while patients were awake and asleep. Diurnal and nocturnal parafunctional EMG activity was classified as phasic, tonic, or mixed using an EMG threshold of 20% maximal voluntary clenching. Results Highly extended diurnal phasic activity was observed only in the PBC group. The three groups had significantly different mean diurnal phasic episodes per hour, with 13.29±7.18 per hour in the PBC group, 0.95±0.97 per hour in the MC group, and 0.87±0.98 per hour in the YC group (p<0.01). ROC curve analysis suggested that the number of diurnal phasic episodes might be used to predict bite collapsing tooth loss. Conclusion Extensive bite loss might be related to diurnal masticatory muscle parafunction but not to parafunction during sleep. Clinical Relevance: Scientific rationale for study Although mandibular parafunction has been implicated in stomatognathic system breakdown, a causal relationship has not been established because scientific modalities to evaluate parafunctional activity have been lacking. Principal findings This study used a newly developed EMG recording system that evaluates masseter muscle activity throughout the day. Our results challenge the stereotypical idea of nocturnal bruxism as a strong destructive force. We found that diurnal phasic masticatory muscle activity was most characteristic in patients with progressive bite collapse. Practical implications The incidence of diurnal phasic contractions could be used for the prognostic evaluation of stomatognathic system stability. PMID:25010348

Tissue specific and abiotic stress regulated transcription of histidine kinases in plants is also influenced by diurnal rhythm

PubMed Central

Singh, Anupama; Kushwaha, Hemant R.; Soni, Praveen; Gupta, Himanshu; Singla-Pareek, Sneh L.; Pareek, Ashwani

2015-01-01

Two-component system (TCS) is one of the key signal sensing machinery which enables species to sense environmental stimuli. It essentially comprises of three major components, sensory histidine kinase proteins (HKs), histidine phosphotransfer proteins (Hpts), and response regulator proteins (RRs). The members of the TCS family have already been identified in Arabidopsis and rice but the knowledge about their functional indulgence during various abiotic stress conditions remains meager. Current study is an attempt to carry out comprehensive analysis of the expression of TCS members in response to various abiotic stress conditions and in various plant tissues in Arabidopsis and rice using MPSS and publicly available microarray data. The analysis suggests that despite having almost similar number of genes, rice expresses higher number of TCS members during various abiotic stress conditions than Arabidopsis. We found that the TCS machinery is regulated by not only various abiotic stresses, but also by the tissue specificity. Analysis of expression of some representative members of TCS gene family showed their regulation by the diurnal cycle in rice seedlings, thus bringing-in another level of their transcriptional control. Thus, we report a highly complex and tight regulatory network of TCS members, as influenced by the tissue, abiotic stress signal, and diurnal rhythm. The insights on the comparative expression analysis presented in this study may provide crucial leads toward dissection of diverse role(s) of the various TCS family members in Arabidopsis and rice. PMID:26442025

Chronic sciatic neuropathy in rat reduces voluntary wheel running activity with concurrent chronic mechanical allodynia

PubMed Central

Whitehead, RA; Lam, NL; Sun, MS; Sanchez, JJ; Noor, S; Vanderwall, AG; Petersen, TR; Martin, HB

2016-01-01

BACKGROUND Animal models of peripheral neuropathy produced by a number of manipulations are assessed for the presence of pathological pain states such as allodynia. While stimulus-induced behavioral assays are frequently used and important to examine allodynia (i.e. sensitivity to light mechanical touch; von Frey fiber test) other measures of behavior that reflect overall function are not only complementary to stimulus-induced responsive measures, but are also critical to gain a complete understanding of the effects of the pain model on quality of life, a clinically relevant aspect of pain on general function. Voluntary wheel running activity in rodent models of inflammatory and muscle pain is emerging as a reliable index of general function that extends beyond stimulus-induced behavioral assays. Clinically, reports of increased pain intensity occur at night, a period typically characterized with reduced activity during the diurnal cycle. We therefore examined in rats whether alterations in wheel running activity were more robust during the inactive phase compared to the active phase of their diurnal cycle in a widely used rodent model of chronic peripheral neuropathic pain, the sciatic nerve chronic constriction injury (CCI) model. METHODS In adult male Sprague Dawley rats, baseline (BL) hindpaw threshold responses to light mechanical touch were assessed using the von Frey test prior to measuring BL activity levels using freely accessible running wheels (1 hr/day for 7 sequential days) to quantify distance traveled. Running wheel activity BL values are expressed as total distance traveled (m). The overall experimental design was: following BL measures, rats underwent either sham or CCI surgery followed by repeated behavioral re-assessment of hindpaw thresholds and wheel running activity levels for up to 18 days after surgery. Specifically, separate groups of rats were assessed for wheel running activity levels (1 hr total/trial) during the onset (within first 2 hrs) of either the (1) inactive (n=8/gp) or (2) active (n = 8/gp) phase of the diurnal cycle. An additional group of CCI-treated rats (n = 8/gp) were exposed to a locked running wheel to control for the potential effects of wheel running exercise on allodynia. The 1-hr running wheel trial period was further examined at discrete 20-min intervals to identify possible pattern differences in activity during the first, middle and last portion of the 1-hr trial. The effect of neuropathy on activity levels were assessed by measuring the change from their respective BLs to distance traveled in the running wheels. RESULTS While wheel running distances between groups were not different at BL from rats examined during either the inactive phase of the diurnal cycle or active phase of the diurnal cycle, sciatic nerve CCI reduced running wheel activity levels compared to sham-operated controls during the inactive phase. Additionally, compared to sham controls, bilateral low threshold mechanical allodynia was observed at all time-points after surgical induction of neuropathy in rats with free-wheel and locked-wheel access. Allodynia in CCI compared to shams was replicated in rats whose running wheel activity was examined during the active phase of the diurnal cycle. Conversely, no significant reduction in wheel running activity was observed in CCI-treated rats compared to sham controls at any timepoint when activity levels were examined during the active diurnal phase. Lastly, running wheel activity patterns within the 1 hr trial period during the inactive phase of the diurnal cycle were relatively consistent throughout each 20 min phase. CONCLUSIONS Compared to non-neuropathic sham controls, a profound and stable reduction of running wheel activity was observed in CCI rats during the inactive phase of the diurnal cycle. A concurrent robust allodynia persisted in all rats regardless of when wheel running activity was examined or whether they ran on wheels, suggesting that acute wheel running activity does not alter chronic low intensity mechanical allodynia as measured using the von Frey fiber test. Overall, these data support that acute wheel running exercise with limited repeated exposures does not itself alter allodynia and offers a behavioral assay complementary to stimulus-induced measures of neuropathic pain. PMID:27782944

Fluctuation of Dof1/Dof2 expression ratio under the influence of varying nitrogen and light conditions: involvement in differential regulation of nitrogen metabolism in two genotypes of finger millet (Eleusine coracana L.).

PubMed

Gupta, Supriya; Gupta, Sanjay Mohan; Gupta, Alok Kumar; Gaur, Vikram Singh; Kumar, Anil

2014-08-10

In order to gain insights into the mechanism of high nitrogen use efficiency (NUE) of finger millet (FM) the role of Dof2 transcription factor (TF), which is a repressor of genes involved in C/N metabolism was investigated. The partial cDNA fragment of EcDof2 (912-bp; GenBank acc. no. KF261117) was isolated and characterized from finger millet (FM) that showed 63% and 58% homology with Dof2 of Zea mays at nucleotide and protein level, respectively. Its expression studies were carried out along with the activator EcDof1 in two genotypes (GE3885, high protein genotype (HPG); GE1437, low protein genotype (LPG)) of FM differing in grain protein contents (13.8% and 6.2%) showed that EcDof2 is expressed in both shoot and root tissues with significantly (p≤0.05) higher expression in the roots. The diurnal expression of both EcDof1 and EcDof2 in shoots was differential having different time of peak expression indicating a differential response to diurnal condition. Under continuous dark conditions, expression of EcDof1 and EcDof2 oscillated in both the genotypes whereas on illumination, the fold expression of EcDof1 was higher as compared to EcDof2. Under increasing nitrate concentration, EcDof2 expression increases in roots and shoots of LPG while it remains unchanged in HPG. However, the EcDof1 expression was found to increase in both genotypes. Further, time kinetics studies under single nitrate concentration revealed that EcDof2 was repressed in the roots of both genotypes whereas EcDof1 oscillated with time. The EcDof1/EcDof2 ratio measured showed differential response under different light and nitrogen conditions. It was higher in the roots of HPG indicating higher activation of genes involved in N uptake and assimilation resulting in high grain protein accumulation. The results indicate that both light and nitrogen concentration influence Dof1 and Dof2 expression and suggests a complex pattern of regulation of genes influenced by these plant specific TFs. In nutshell, the Dof1/Dof2 ratio can serve as an index for measuring the N responsiveness and NUE of crops and can be further validated by Dof2 knock down approach. Copyright © 2014 Elsevier B.V. All rights reserved.

Central role for ferritin in the day/night regulation of iron homeostasis in marine phytoplankton

PubMed Central

Botebol, Hugo; Lesuisse, Emmanuel; Šuták, Robert; Six, Christophe; Lozano, Jean-Claude; Schatt, Philippe; Vergé, Valérie; Kirilovsky, Amos; Morrissey, Joe; Léger, Thibaut; Camadro, Jean-Michel; Gueneugues, Audrey; Bowler, Chris; Blain, Stéphane; Bouget, François-Yves

2015-01-01

In large regions of the open ocean, iron is a limiting resource for phytoplankton. The reduction of iron quota and the recycling of internal iron pools are among the diverse strategies that phytoplankton have evolved to allow them to grow under chronically low ambient iron levels. Phytoplankton species also have evolved strategies to cope with sporadic iron supply such as long-term storage of iron in ferritin. In the picophytoplanktonic species Ostreococcus we report evidence from observations both in the field and in laboratory cultures that ferritin and the main iron-binding proteins involved in photosynthesis and nitrate assimilation pathways show opposite diurnal expression patterns, with ferritin being maximally expressed during the night. Biochemical and physiological experiments using a ferritin knock-out line subsequently revealed that this protein plays a central role in the diel regulation of iron uptake and recycling and that this regulation of iron homeostasis is essential for cell survival under iron limitation. PMID:26553998

Central role for ferritin in the day/night regulation of iron homeostasis in marine phytoplankton.

PubMed

Botebol, Hugo; Lesuisse, Emmanuel; Šuták, Robert; Six, Christophe; Lozano, Jean-Claude; Schatt, Philippe; Vergé, Valérie; Kirilovsky, Amos; Morrissey, Joe; Léger, Thibaut; Camadro, Jean-Michel; Gueneugues, Audrey; Bowler, Chris; Blain, Stéphane; Bouget, François-Yves

2015-11-24

In large regions of the open ocean, iron is a limiting resource for phytoplankton. The reduction of iron quota and the recycling of internal iron pools are among the diverse strategies that phytoplankton have evolved to allow them to grow under chronically low ambient iron levels. Phytoplankton species also have evolved strategies to cope with sporadic iron supply such as long-term storage of iron in ferritin. In the picophytoplanktonic species Ostreococcus we report evidence from observations both in the field and in laboratory cultures that ferritin and the main iron-binding proteins involved in photosynthesis and nitrate assimilation pathways show opposite diurnal expression patterns, with ferritin being maximally expressed during the night. Biochemical and physiological experiments using a ferritin knock-out line subsequently revealed that this protein plays a central role in the diel regulation of iron uptake and recycling and that this regulation of iron homeostasis is essential for cell survival under iron limitation.

Soil temperature extrema recovery rates after precipitation cooling

NASA Technical Reports Server (NTRS)

Welker, J. E.

1984-01-01

From a one dimensional view of temperature alone variations at the Earth's surface manifest themselves in two cyclic patterns of diurnal and annual periods, due principally to the effects of diurnal and seasonal changes in solar heating as well as gains and losses of available moisture. Beside these two well known cyclic patterns, a third cycle has been identified which occurs in values of diurnal maxima and minima soil temperature extrema at 10 cm depth usually over a mesoscale period of roughly 3 to 14 days. This mesoscale period cycle starts with precipitation cooling of soil and is followed by a power curve temperature recovery. The temperature recovery clearly depends on solar heating of the soil with an increased soil moisture content from precipitation combined with evaporation cooling at soil temperatures lowered by precipitation cooling, but is quite regular and universal for vastly different geographical locations, and soil types and structures. The regularity of the power curve recovery allows a predictive model approach over the recovery period. Multivariable linear regression models alloy predictions of both the power of the temperature recovery curve as well as the total temperature recovery amplitude of the mesoscale temperature recovery, from data available one day after the temperature recovery begins.

Alpine glacier-fed turbid lakes are discontinuous cold polymictic rather than dimictic

PubMed Central

Peter, Hannes; Sommaruga, Ruben

2017-01-01

Abstract Glacier retreat as a consequence of climate change influences freshwater ecosystems in manifold ways, yet the physical and chemical bases of these effects are poorly studied. Here, we characterize how water temperature differs between alpine lakes with and without direct glacier influence on seasonal and diurnal timescales. Using high temporal resolution monitoring of temperature in 4 lakes located in a catchment influenced by glacier retreat, we reported unexpectedly high surface temperatures, even in proglacial lakes located 2600 m a.s.l. Cold glacier meltwater and low nighttime air temperatures caused a distinct diurnal pattern of water temperature in the water column of glacier-influenced lakes. Precipitation onto glacier surfaces apparently leads to rapid cooling of the glacier-fed lakes and disrupts the thermal stratification with several mixing events during the summer. Taken together, these mechanisms contribute to the unique seasonal and diurnal dynamics of glacier-influenced lakes that contrast with the typical dimictic pattern of clear alpine lakes and represent an example of discontinuous cold polymictic lake type. This work contributes to the basic description of how climate and meteorology affect the physical properties of an increasingly common lake type. PMID:28690780

A Smartphone App Reveals Erratic Diurnal Eating Patterns in Humans that Can Be Modulated for Health Benefits.

PubMed

Gill, Shubhroz; Panda, Satchidananda

2015-11-03

A diurnal rhythm of eating-fasting promotes health, but the eating pattern of humans is rarely assessed. Using a mobile app, we monitored ingestion events in healthy adults with no shift-work for several days. Most subjects ate frequently and erratically throughout wakeful hours, and overnight fasting duration paralleled time in bed. There was a bias toward eating late, with an estimated <25% of calories being consumed before noon and >35% after 6 p.m. "Metabolic jetlag" resulting from weekday/weekend variation in eating pattern akin to travel across time zones was prevalent. The daily intake duration (95% interval) exceeded 14.75 hr for half of the cohort. When overweight individuals with >14 hr eating duration ate for only 10-11 hr daily for 16 weeks assisted by a data visualization (raster plot of dietary intake pattern, "feedogram") that we developed, they reduced body weight, reported being energetic, and improved sleep. Benefits persisted for a year. Copyright © 2015 Elsevier Inc. All rights reserved.

The impact of the severity of early life stress on diurnal cortisol: The role of puberty.

PubMed

King, Lucy S; Colich, Natalie L; LeMoult, Joelle; Humphreys, Kathryn L; Ordaz, Sarah J; Price, Alexandria N; Gotlib, Ian H

2017-03-01

Researchers have documented dysregulation of the hypothalamic-pituitary-adrenal (HPA) axis in children and adolescents who experienced early life stress (ELS). The precise nature of this dysregulation, however, has been difficult to discern. In fact, both elevated and blunted patterns of diurnal cortisol regulation have been reported in children and adolescents exposed to greater ELS, including both reduced and heightened cortisol levels and change in cortisol across the day. These divergent findings may be due to developmental changes in the relation between ELS and HPA-axis functioning. The present study was designed to examine the role of puberty in the impact of the severity of ELS on the regulation of diurnal cortisol. Boys and girls (N=145) ages 9-13 years recruited from lower-risk communities completed an interview about their ELS experiences and at-home collection of diurnal cortisol. ELS experiences were objectively coded for severity, and children's level of pubertal development was measured using Tanner Staging. Multi-level piecewise mixed-effects models tested the effects of ELS severity and pubertal stage on cortisol levels at waking, the cortisol awakening response (CAR), and the daytime cortisol slope. While we found no significant interactive effects of pubertal stage and ELS severity on cortisol levels at waking or the daytime cortisol slope, findings indicated that pubertal stage interacted with ELS severity to predict the cortisol awakening response (CAR). Specifically, in earlier puberty, higher ELS was associated with a blunted CAR compared to lower ELS; in contrast, in later puberty, higher ELS was associated with a heightened CAR compared to lower ELS. Differences in the relation between ELS severity and the CAR were uniquely determined by puberty, and not by age. By considering and examining the role of puberty, the current study provides a developmental explanation for previous divergent findings of both blunted and heightened patterns of diurnal cortisol following ELS. These results indicate that careful attention should be given to children's pubertal status before drawing conclusions concerning the nature of diurnal cortisol dysregulation. Copyright © 2016 Elsevier Ltd. All rights reserved.

Tropical montane forest conversion affects spatial and temporal nitrogen dynamics in Kenyan headwater catchment

NASA Astrophysics Data System (ADS)

Jacobs, Suzanne; Weeser, Björn; Breuer, Lutz; Butterbach-Bahl, Klaus; Guzha, Alphonce; Rufino, Mariana

2017-04-01

Deforestation and land use change (LUC) are often stated as major contributors to changes in water quality, although other catchment characteristics such as topography, geology and climate can also play a role. Understanding how stream water chemistry is affected by LUC is essential for sustainable water management and land use planning. However, there is often a lack of reliable data, especially in less studied regions such as East Africa. This study focuses on three sub-catchments (27-36 km2) with different land use types (natural forest, smallholder agriculture and tea/tree plantations) nested in a 1023 km2 headwater catchment in the Mau Forest Complex, Kenya's largest closed-canopy indigenous tropical montane forest. In the past decades approx. 25% of the natural forest was lost due to land use change. We studied seasonal, diurnal and spatial patterns of total dissolved nitrogen (TDN), nitrate (NO3-N) and dissolved organic nitrogen (DON) using a combination of high-resolution in-situ measurements, bi-weekly stream water samples and spatial sampling campaigns. Multiple linear regression analysis of the spatial data indicates that land use shows a strong influence on TDN and nitrate, while DON is more influenced by precipitation. Highest TDN and nitrate concentrations are found in tea plantations, followed by smallholder agriculture and natural forest. This ranking does not change throughout the year, though concentrations of TDN and nitrate are respectively 27.6 and 25.4% lower in all catchments during the dry season. Maximum Overlap Discrete Wavelet Transform (MODWT) analysis of the high resolution nitrate data revealed a seasonal effect on diurnal patterns in the natural forest catchment, where the daily peak shifts from early morning in the wet season to mid-afternoon in the dry season. The smallholder and tea catchment do not exhibit clear diurnal patterns. The results suggest that land use affects dissolved nitrogen concentrations, leading to higher N export in catchments under managed land use. Furthermore, the changes in diurnal patterns in the forest catchment and absence of similar patterns in the other catchments are an indication that biogeochemical processes such as nitrification and denitrification in areas under different land use are affected as well. This could have implications for regional N-cycling.

Local diurnal wind-driven variabiity and upwelling in a small coastal embayment

NASA Astrophysics Data System (ADS)

Walter, R. K.; Reid, E. C.; Davis, K. A.; Armenta, K. J.; Merhoff, K.; Nidzieko, N.

2017-12-01

The oceanic response to high-frequency local diurnal wind forcing is examined in a small coastal embayment located along an understudied stretch of the central California coast. We show that local diurnal wind forcing is the dominant control on nearshore temperature variability and circulation patterns. A complex empirical orthogonal function (CEOF) analysis of velocities in San Luis Obispo Bay reveals that the first-mode CEOF amplitude time series, which accounts for 47.9% of the variance, is significantly coherent with the local wind signal at the diurnal frequency and aligns with periods of weak and strong wind forcing. The diurnal evolution of the hydrographic structure and circulation in the bay is examined using both individual events and composite-day averages. During the late afternoon, the local wind strengthens and results in a sheared flow with near-surface warm waters directed out of the bay and a compensating flow of colder waters into the bay over the bottom portion of the water column. This cold water intrusion into the bay causes isotherms to shoal toward the surface and delivers subthermocline waters to shallow reaches of the bay, representing a mechanism for small-scale upwelling. When the local winds relax, the warm water mass advects back into the bay in the form of a buoyant plume front. Local diurnal winds are expected to play an important role in nearshore dynamics and local upwelling in other small coastal embayments with important implications for various biological and ecological processes.

Local diurnal wind-driven variability and upwelling in a small coastal embayment

NASA Astrophysics Data System (ADS)

Walter, Ryan K.; Reid, Emma C.; Davis, Kristen A.; Armenta, Kevin J.; Merhoff, Kevin; Nidzieko, Nicholas J.

2017-02-01

The oceanic response to high-frequency local diurnal wind forcing is examined in a small coastal embayment located along an understudied stretch of the central California coast. We show that local diurnal wind forcing is the dominant control on nearshore temperature variability and circulation patterns. A complex empirical orthogonal function (CEOF) analysis of velocities in San Luis Obispo Bay reveals that the first-mode CEOF amplitude time series, which accounts for 47.9% of the variance, is significantly coherent with the local wind signal at the diurnal frequency and aligns with periods of weak and strong wind forcing. The diurnal evolution of the hydrographic structure and circulation in the bay is examined using both individual events and composite-day averages. During the late afternoon, the local wind strengthens and results in a sheared flow with near-surface warm waters directed out of the bay and a compensating flow of colder waters into the bay over the bottom portion of the water column. This cold water intrusion into the bay causes isotherms to shoal toward the surface and delivers subthermocline waters to shallow reaches of the bay, representing a mechanism for small-scale upwelling. When the local winds relax, the warm water mass advects back into the bay in the form of a buoyant plume front. Local diurnal winds are expected to play an important role in nearshore dynamics and local upwelling in other small coastal embayments with important implications for various biological and ecological processes.

Effects of intermittent flow and irradiance level on back reef Porites corals at elevated seawater temperatures

USGS Publications Warehouse

Smith, L.W.; Birkeland, C.

2007-01-01

Corals inhabiting shallow back reef habitats are often simultaneously exposed to elevated seawater temperatures and high irradiance levels, conditions known to cause coral bleaching. Water flow in many tropical back reef systems is tidally influenced, resulting in semi-diurnal or diurnal flow patterns. Controlled experiments were conducted to test effects of semi-diurnally intermittent water flow on photoinhibition and bleaching of the corals Porites lobata and P. cylindrica kept at elevated seawater temperatures and different irradiance levels. All coral colonies were collected from a shallow back reef pool on Ofu Island, American Samoa. In the high irradiance experiments, photoinhibition and bleaching were less for both species in the intermittent high-low flow treatment than in the constant low flow treatment. In the low irradiance experiments, there were no differences in photoinhibition or bleaching for either species between the flow treatments, despite continuously elevated seawater temperatures. These results suggest that intermittent flow associated with semi-diurnal tides, and low irradiances caused by turbidity or shading, may reduce photoinhibition and bleaching of back reef corals during warming events. ?? 2006 Elsevier B.V. All rights reserved.

Correlations between environmental factors and wild bee behavior on alfalfa (Medicago sativa) in northwestern China.

PubMed

Wang, Xiaojuan; Liu, Hongping; Li, Xiaoxia; Song, Yu; Chen, Li; Jin, Liang

2009-10-01

To discover the effect of environmental factors on pollinator visitation to flowering Medicago sativa, several field experiments were designed to examine the diurnal movement patterns of wild bee species in the Hexi Corridor of northwestern China. Our study results showed that Megachile abluta, M. spissula, and Xylocopa valga showed unimodal diurnal foraging behavior, whereas Andrena parvula and Anthophora melanognatha showed bimodal diurnal foraging behavior. Correlation analysis indicated that diurnal foraging activities of pollinators were significantly correlated with environmental factors. Correlations of foraging activities versus environmental factors for M. abluta, M. spissula, and X. valga best fit a linear model, whereas those of A. parvula and A. melanognatha best fit a parallel quadratic model. Results of this study indicated that solitary wild bees such as M. abluta, M. spissula, X. valga, A. parvula, and A. melanognatha are potential alfalfa pollinators in the Hexi Corridor. An understanding of the environmental factors that affect the behaviors of different wild bees foraging in alfalfa are basic to the utilization of solitary wild bees in a practical way for increased, or more consistent, pollination of alfalfa for seed production.

Brief Report: The Impact of Negative Family-Work Spillover on Diurnal Cortisol

PubMed Central

Zilioli, Samuele; Imami, Ledina; Slatcher, Richard B.

2016-01-01

Both dimensions of the work-family interface, work-to-family and family-to-work spillover, have important implications for health and well-being. Despite the importance of these associations, very little is known about the physiological mechanisms through which the interplay between family and work experiences are translated into long-lasting consequences for health. This study investigated both positive and negative aspects of each spillover dimension on diurnal cortisol secretion patterns in a large panel study of working adults between the ages of 33 and 80. Results revealed that greater negative family-to-work (NFW) spillover predicted lower wake-up cortisol values and a flatter (less “healthy”) diurnal cortisol slope. This effect was evident even after controlling for the effects of the other spillover dimensions. These findings indicate that not all aspects of the work-family interface might impact stress physiology to the same extent and suggest that diurnal cortisol may be an important pathway through which negative aspects of the work-family interface leave their mark on health. PMID:27280370

The impact of negative family-work spillover on diurnal cortisol.

PubMed

Zilioli, Samuele; Imami, Ledina; Slatcher, Richard B

2016-10-01

Both dimensions of the work-family interface, work-to-family and family-to-work spillover, have important implications for health and well-being. Despite the importance of these associations, very little is known about the physiological mechanisms through which the interplay between family and work experiences are translated into long-lasting consequences for health. This study investigated both positive and negative aspects of each spillover dimension on diurnal cortisol secretion patterns in a large panel study of working adults between the ages of 33 and 80. Greater negative family-to-work (NFW) spillover predicted lower wake-up cortisol values and a flatter (less "healthy") diurnal cortisol slope. This effect was evident even after controlling for the effects of the other spillover dimensions. These findings indicate that not all aspects of the work-family interface might impact stress physiology to the same extent and suggest that diurnal cortisol may be an important pathway through which negative aspects of the work-family interface leave their mark on health. (PsycINFO Database Record (c) 2016 APA, all rights reserved).

The Prospective Association of the Diurnal Cortisol Rhythm With Sleep Duration and Perceived Sleeping Problems in Preschoolers: The Generation R Study.

PubMed

Saridjan, Nathalie S; Kocevska, Desana; Luijk, Maartje P C M; Jaddoe, Vincent W V; Verhulst, Frank C; Tiemeier, Henning

2017-06-01

Cortisol, the end product of the hypothalamic-pituitary-adrenal axis, plays an important role in modulating sleep. Yet, studies investigating the association between diurnal cortisol rhythm and sleep patterns in young children are scarce. We tested the hypothesis that the diurnal cortisol rhythm is associated with shorter sleep duration and more sleep problems across early childhood. This study was embedded in Generation R, a population-based cohort from fetal life onward. Parents collected saliva samples from their infant at five moments during day 1. In 322 infants aged 12 to 20 months, we determined the diurnal cortisol rhythm by calculating the area under the curve (AUC), the cortisol awakening response (CAR), and the diurnal slope. Sleep duration and sleep behavior were repeatedly assessed across ages of 14 months to 5 years. Generalized estimating equation models were used to assess related cortisol measures to sleep duration and sleep behavior. The diurnal cortisol slope and the CAR, but not the AUC, were associated with sleep duration across childhood. Children with flatter slopes and children with a more positive CAR were more likely to have shorter nighttime sleep duration (β per nmol/L/h slope = -0.12, 95% confidence interval = -0.19 to -0.05, p = .001; β per nmol/L CAR = -0.01, 95% confidence interval = -0.02 to 0.00, p = .04). Cortisol measures did not predict sleep problems. The present study suggests that a flatter diurnal cortisol slope and a more marked morning rise, which can indicate stress (or hypothalamic-pituitary-adrenal dysregulation), have a long-term association with sleep regulation.

Diurnal Changes in Volume and Specific Tissue Weight of Crassulacean Acid Metabolism Plants 1

PubMed Central

Chen, Sheng-Shu; Black, Clanton C.

1983-01-01

The diurnal variations in volume and in specific weight were determined for green stems and leaves of Crassulacen acid metabolism (CAM) plants. Volume changes were measured by a water displacement method. Diurnal variations occurred in the volume of green CAM tissues. Their volume increased early in the light period reaching a maximum about mid-day, then the volume decreased to a minimum near midnight. The maximum volume increase each day was about 2.7% of the total volume. Control leaves of C3 and C4 plants exhibited reverse diurnal volume changes of 0.2 to 0.4%. The hypothesis is presented and supported that green CAM tissues should exhibit a diurnal increase in volume due to the increase of internal gas pressure from CO2 and O2 when their stomata are closed. Conversely, the volume should decrease when the gas pressure is decreased. The second hypothesis presented and supported was that the specific weight (milligrams of dry weight per square centimeter of green surface area) of green CAM tissues should increase at night due to the net fixation of CO2. Green CAM tissues increased their specific weight at night in contrast to control C3 and C4 leaves which decreased their specific weight at night. With Kalanchoë daigremontiana leaves, the calculated increase in specific leaf weight at night based on estimates of carbohydrate available for net CO2 fixation was near 6% and the measured increase in specific leaf weight was 6%. Diurnal measurements of CAM tissue water content were neither coincident nor reciprocal with their diurnal patterns of either volume or specific weight changes. PMID:16662833

Patterns of fire activity over Indonesia and Malaysia from polar and geostationary satellite observations

NASA Astrophysics Data System (ADS)

Hyer, Edward J.; Reid, Jeffrey S.; Prins, Elaine M.; Hoffman, Jay P.; Schmidt, Christopher C.; Miettinen, Jukka I.; Giglio, Louis

2013-03-01

Biomass burning patterns over the Maritime Continent of Southeast Asia are examined using a new active fire detection product based on application of the Wildfire Automated Biomass Burning Algorithm (WF_ABBA) to data from the imagers on the MTSAT geostationary satellites operated by the Japanese space agency JAXA. Data from MTSAT-1R and MTSAT-2 covering 34 months from September 2008 to July 2011 are examined for a study region consisting of Indonesia, Malaysia, and nearby environs. The spatial and temporal distributions of fires detected in the MTSAT WF_ABBA product are described and compared with active fire observations from MODIS MOD14 data. Land cover distributions for the two instruments are examined using a new 250 m land cover product from the National University of Singapore. The two products show broadly similar patterns of fire activity, land cover distribution of fires, and pixel fire radiative power (FRP). However, the MTSAT WF_ABBA data differ from MOD14 in important ways. Relative to MODIS, the MTSAT WF_ABBA product has lower overall detection efficiency, but more fires detected due to more frequent looks, a greater relative fraction of fires in forest and a lower relative fraction of fires in open areas, and significantly higher single-pixel retrieved FRP. The differences in land cover distribution and FRP between the MTSAT and MODIS products are shown to be qualitatively consistent with expectations based on pixel size and diurnal sampling. The MTSAT WF_ABBA data are used to calculate coverage-corrected diurnal cycles of fire for different regions within the study area. These diurnal cycles are preliminary but demonstrate that the fraction of diurnal fire activity sampled by the two MODIS sensors varies significantly by region and vegetation type. Based on the results from comparison of the two fire products, a series of steps is outlined to account for some of the systematic biases in each of these satellite products in order to produce a successful merged fire detection product.

Diurnal and Intra-Annual Variations in Greenhouse Gases at Fixed Sites in the San Francisco Bay Area

NASA Astrophysics Data System (ADS)

Newman, S.; Guha, A.; Martien, P. T.; Bower, J.; Perkins, I.; Randall, S.; Young, A.; Stevenson, E.; Hilken, H.

2017-12-01

The Bay Area Air Quality Management District, the San Francisco Bay Area's air quality regulatory agency, has set a goal to reduce the region's greenhouse gas (GHG) emissions to 80% below 1990 levels by 2050, consistent with the State of California's climate goals. Recently, the Air District's governing board adopted a 2017 Clean Air Plan which lays out the agency's vision and includes actions to put the region on a path towards achieving the 2050 goal while also reducing air pollution and related health impacts. The Plan includes GHG rule-making efforts, policy initiatives, local government partnerships, outreach, grants, and incentives, encompassing over 250 specific implementation actions across all economic sectors to effect ambitious emission reductions in the region. To track trends in atmospheric observations of GHGs and associated species and monitor changes in regional emission patterns, the Air District has established a fixed site network (CO2, CH4, CO) of one generally upwind site (Bodega Bay - on the coast north of Marin County) and three receptor sites (Bethel Island - east of the major refineries, in the Sacramento River Delta; Livermore - east of the bulk of the East Bay cities; and San Martin - south of the major city of San Jose). Having collected over a year of data for each of the fixed sites, the Air District is now investigating spatial and temporal variations in GHG emissions. Concentrating on variations in diurnal cycles, we see the commonly observed pattern of seasonal changes in diurnal amplitude at all sites, with larger variations during the winter than the summer, consistent with seasonally varying daily changes in planetary boundary layer heights. Investigations explore the weekday/weekend effect on the diurnal patterns and the effect of seasonal wind direction changes on the intra-annual variations of the local enhancements. The Air District is beginning to investigate the ways in which the fixed site network reflects the dominant upwind GHG emissions.

Trait anxiety and salivary cortisol during free living and military stress.

PubMed

Taylor, Marcus K; Reis, Jared P; Sausen, Kenneth P; Padilla, Genieleah A; Markham, Amanda E; Potterat, Eric G; Drummond, Sean P A

2008-02-01

Accumulating evidence suggests that negative affect is associated with elevated cortisol. Limited research has investigated this association in young, highly functioning, and stress-resilient populations. We examined the relation of trait anxiety with total and diurnal salivary cortisol during free-living conditions and during a stressful military exercise in 26 military men ages 19-30 yr (M = 21.6, SD = 2.3). Salivary cortisol was assessed at five time points over 2 consecutive days of free-living measurement, and three time points during a stressful military experience. Trait anxiety was measured with the trait portion of the Spielberger State-Trait Anxiety Inventory 1-3 wk prior to the military exercise. Total cortisol concentrations were similar between men reporting high or low anxiety during free-living conditions (8.6 +/- 3.2 vs. 7.4 +/- 2.8 nmol x L(-1), respectively, P > 0.05), and military stress (21.3 +/- 7.3 vs. 19.0 +/- 7.0 nmol x L(-1), respectively, P > 0.05). The diurnal cortisol profile differed significantly (P = 0.04) between these men during the free-living condition, but not the stressful military experience (P > 0.05). Specifically, during free living, men with low anxiety exhibited a diurnal cortisol pattern that peaked in the early morning, decreased precipitously during the midmorning, and continued to decrease throughout the day, reaching a nadir in the evening. By contrast, the cortisol pattern of high-anxiety men remained elevated and significantly higher than their low-anxiety counterparts during the midmorning, decreased more slowly throughout the day, and reached its lowest level in the evening. Results were not substantially altered following adjustment for sleep duration or wake time. These findings suggest that trait anxiety influences the diurnal cortisol pattern in young, apparently healthy men during free-living conditions, but does not predict the cortisol response to uncontrollable military stress.

Diural TSH variations in hypothyroidism.

PubMed

Weeke, J; Laurberg, P

1976-07-01

There is a circadian variation in serum TSH in euthyroid subjects. A similar diurnal variation has been demonstrated in patients with hypothyroidism. In the present study the 24-hour pattern of serum TSH was investigated in eight patients with hypothyroidism of varying severity and in five hypothyroid patients treated with thyroxine (T4). There was a circadian variation in serum TSH in patients with hypothyroidism of moderate degree, and in patients treated for severe hypothyrodism with thyroxine. The pattern was similar to that found in normal subjects, i.e., low TSH levels in the daytime and higher levels at night. In severely hypothyroid patients, no diurnal variation in serum TSH was observed. A practical consequence is that blood samples for TSH measurements in patients with moderately elevated TSH levels are best taken after 1100 h, when the low day levels are reached.

Time to pay attention: attentional performance time-stamped prefrontal cholinergic activation, diurnality and performance

PubMed Central

Paolone, Giovanna; Lee, Theresa M.; Sarter, Martin

2012-01-01

Although the impairments in cognitive performance that result from shifting or disrupting daily rhythms have been demonstrated, the neuronal mechanisms that optimize fixed time daily performance are poorly understood. We previously demonstrated that daily practice of a sustained attention task (SAT) evokes a diurnal activity pattern in rats. Here we report that SAT practice at a fixed time produced practice time-stamped increases in prefrontal cholinergic neurotransmission that persisted after SAT practice was terminated and in a different environment. SAT time-stamped cholinergic activation occurred irrespective of whether the SAT was practiced during the light or dark phase or in constant light conditions. In contrast, prior daily practice of an operant schedule of reinforcement, albeit generating more rewards and lever presses per session than the SAT, neither activated the cholinergic system nor affected the animals' nocturnal activity pattern. Likewise, food-restricted animals exhibited strong food anticipatory activity (FAA) and attenuated activity during the dark period but FAA was not associated with increases in prefrontal cholinergic activity. Removal of cholinergic neurons impaired SAT performance and facilitated the reemergence of nocturnality. Shifting SAT practice away from a fixed time resulted in significantly lower performance. In conclusion, these experiments demonstrated that fixed time, daily practice of a task assessing attention generates a precisely practice time-stamped activation of the cortical cholinergic input system. Time-stamped cholinergic activation benefits fixed time performance and, if practiced during the light phase, contributes to a diurnal activity pattern. PMID:22933795

Time to pay attention: attentional performance time-stamped prefrontal cholinergic activation, diurnality, and performance.

PubMed

Paolone, Giovanna; Lee, Theresa M; Sarter, Martin

2012-08-29

Although the impairments in cognitive performance that result from shifting or disrupting daily rhythms have been demonstrated, the neuronal mechanisms that optimize fixed-time daily performance are poorly understood. We previously demonstrated that daily practice of a sustained attention task (SAT) evokes a diurnal activity pattern in rats. Here, we report that SAT practice at a fixed time produced practice time-stamped increases in prefrontal cholinergic neurotransmission that persisted after SAT practice was terminated and in a different environment. SAT time-stamped cholinergic activation occurred regardless of whether the SAT was practiced during the light or dark phase or in constant-light conditions. In contrast, prior daily practice of an operant schedule of reinforcement, albeit generating more rewards and lever presses per session than the SAT, neither activated the cholinergic system nor affected the animals' nocturnal activity pattern. Likewise, food-restricted animals exhibited strong food anticipatory activity (FAA) and attenuated activity during the dark phase but FAA was not associated with increases in prefrontal cholinergic activity. Removal of cholinergic neurons impaired SAT performance and facilitated the reemergence of nocturnality. Shifting SAT practice away from a fixed time resulted in significantly lower performance. In conclusion, these experiments demonstrated that fixed-time, daily practice of a task assessing attention generates a precisely practice time-stamped activation of the cortical cholinergic input system. Time-stamped cholinergic activation benefits fixed-time performance and, if practiced during the light phase, contributes to a diurnal activity pattern.

Temperature Variation under Continuous Light Restores Tomato Leaf Photosynthesis and Maintains the Diurnal Pattern in Stomatal Conductance

PubMed Central

Haque, Mohammad S.; de Sousa, Alexandra; Soares, Cristiano; Kjaer, Katrine H.; Fidalgo, Fernanda; Rosenqvist, Eva; Ottosen, Carl-Otto

2017-01-01

The response of tomato plants (Solanum lycopersicum L. cv. Aromata) to continuous light (CL) in relation to photosynthesis, abscisic acid (ABA) and reactive oxygen species (ROS) was investigated to improve the understanding of the development and/or alleviation of CL-induced leaf injury in constant and diurnal temperature fluctuations with similar daily light integral and daily mean temperature. The plants were grown in three photoperiodic treatments for 15 days; One treatment with a 16/8 h light/dark period and a light/dark temperature of 27/17°C (Control), two CL treatments with 24 h photoperiods, one with a constant temperature of 24°C (CLCT) and the other one with variable temperature of 27/17°C for 16/8 ho, respectively (CLVT). A diurnal pattern of stomatal conductance (gs) and [ABA] was observed in the plants grown in the control and CLVT conditions, while the plants in CLCT conditions experienced a significant decrease in stomatal conductance aligned with an increase in ABA. The net photosynthesis (A) was significantly reduced in CLCT, aligned with a significant decrease in the maximum rate of Rubisco carboxylation (Vcmax), the maximum rate of electron transport (Jmax) and mesophyll diffusion conductance to CO2 (gm) in comparison to the control and CLVT. An increased production of H2O2 and O2•- linked with increased activities of antioxidative enzymes was seen in both CL treatments, but despite of this, leaf injuries were only observed in the CLCT treatment. The results suggest that the diurnal temperature fluctuations alleviated the CL injury symptoms, probably because the diurnal cycles of cellular mechanisms were maintained. The ROS were shown not to be directly involved in CL-induced leaf injury, since both ROS production and scavenging was highest in CLVT without leaf chlorotic symptoms. PMID:28979273

Nocturnal activity patterns of northern myotis (Myotis septentrionalis) during the maternity season in West Virginia (USA)

Treesearch

Joshua B. Johnson; John W. Edwards; W. Mark Ford

2011-01-01

Nocturnal activity patterns of northern myotis (Myotis septentrionalis) at diurnal roost trees remain largely uninvestigated. For example, the influence of reproductive status, weather, and roost tree and surrounding habitat characteristics on timing of emergence, intra-night activity, and entrance at their roost trees is poorly known. We examined...

Patterns of expression and normalized levels of the five Arabidopsis phytochromes.

PubMed

Sharrock, Robert A; Clack, Ted

2002-09-01

Using monoclonal antibodies specific for each apoprotein and full-length purified apoprotein standards, the levels of the five Arabidopsis phytochromes and their patterns of expression in seedlings and mature plants and under different light conditions have been characterized. Phytochrome levels are normalized to the DNA content of the various tissue extracts to approximate normalization to the number of cells in the tissue. One phytochrome, phytochrome A, is highly light labile. The other four phytochromes are much more light stable, although among these, phytochromes B and C are reduced 4- to 5-fold in red- or white-light-grown seedlings compared with dark-grown seedlings. The total amount of extractable phytochrome is 23-fold lower in light-grown than dark-grown tissues, and the percent ratios of the five phytochromes, A:B:C:D:E, are measured as 85:10:2:1.5:1.5 in etiolated seedlings and 5:40:15:15:25 in seedlings grown in continuous white light. The four light-stable phytochromes are present at nearly unchanging levels throughout the course of development of mature rosette and reproductive-stage plants and are present in leaves, stems, roots, and flowers. Phytochrome protein expression patterns over the course of seed germination and under diurnal and circadian light cycles are also characterized. Little cycling in response to photoperiod is observed, and this very low amplitude cycling of some phytochrome proteins is out of phase with previously reported cycling of PHY mRNA levels. These studies indicate that, with the exception of phytochrome A, the family of phytochrome photoreceptors in Arabidopsis constitutes a quite stable and very broadly distributed array of sensory molecules.

Diurnal patterns and relationships between physiological and self-reported stress in patients with epilepsy and psychogenic non-epileptic seizures.

PubMed

Novakova, Barbora; Harris, Peter R; Reuber, Markus

2017-05-01

Patients with epilepsy and those with psychogenic non-epileptic seizures (PNES) experience high levels of stress and stress is one of the most frequently self-identified seizure precipitants. Although stress is a multifaceted phenomenon, few studies have systematically examined its different components in patients with seizures. The aim of this study was therefore to describe diurnal patterns of psychological and physiological measures of stress in patients with epilepsy and patients with PNES, and explore their relationships to each other in order to improve our understanding of the mechanisms underlying stress and seizure occurrence in these patients. A range of stress markers including self-reported stress, salivary cortisol, and heart rate variability (HRV) were explored in adult patients with refractory epilepsy (N=22) and those with PNES (N=23) undergoing three- to five-day video-telemetry. A diurnal pattern was observed in the physiological measures, characterized by higher levels of physiological arousal in the mornings and lower levels at night in both patients with epilepsy and PNES. The physiological measures (cortisol and HRV) were associated with each other in patients with epilepsy; no close relationship was found with self-reported stress in either of the two patient groups. The findings contribute to and expand on previous studies of the patterns of stress in patients with seizures. The results also indicate a discrepancy between patients' physiological responses and their subjective stress perceptions, suggesting that simple self-reports cannot be used as a proxy of physiological arousal in patients with seizures and stress. Stress in these patient groups should be studied using a combination of complementary measures. Copyright © 2017 Elsevier Inc. All rights reserved.

Characterising fifteen years of continuous atmospheric radon activity observations at Cape Point (South Africa)

NASA Astrophysics Data System (ADS)

Botha, R.; Labuschagne, C.; Williams, A. G.; Bosman, G.; Brunke, E.-G.; Rossouw, A.; Lindsay, R.

2018-03-01

This paper describes and discusses fifteen years (1999-2013) of continuous hourly atmospheric radon (222Rn) monitoring at the coastal low-altitude Southern Hemisphere Cape Point Station in South Africa. A strong seasonal cycle is evident in the observed radon concentrations, with maxima during the winter months, when air masses arriving at the Cape Point station from over the African continental surface are more frequently observed, and minima during the summer months, when an oceanic fetch is predominant. An atmospheric mean radon activity concentration of 676 ± 2 mBq/m3 is found over the 15-year record, having a strongly skewed distribution that exhibits a large number of events falling into a compact range of low values (corresponding to oceanic air masses), and a smaller number of events with high radon values spread over a wide range (corresponding to continental air masses). The mean radon concentration from continental air masses (1 004 ± 6 mBq/m3) is about two times higher compared to oceanic air masses (479 ± 3 mBq/m3). The number of atmospheric radon events observed is strongly dependent on the wind direction. A power spectral Fast Fourier Transform analysis of the 15-year radon time series reveals prominent peaks at semi-diurnal, diurnal and annual timescales. Two inter-annual radon periodicities have been established, the diurnal 0.98 ± 0.04 day-1 and half-diurnal 2.07 ± 0.15 day-1. The annual peak reflects major seasonal changes in the patterns of offshore versus onshore flow associated with regional/hemispheric circulation patterns, whereas the diurnal and semi-diurnal peaks together reflect the influence of local nocturnal radon build-up over land, and the interplay between mesoscale sea/land breezes. The winter-time diurnal radon concentration had a significant decrease of about 200 mBq/m3 (17%) while the summer-time diurnal radon concentration revealed nearly no changes. A slow decline in the higher radon percentiles (75th and 95th) for the winter and spring seasons is found over the 15-year data set, with most of the change occurring in the first 9 years (1999-2007). This observed inter-annual decline appears to be associated with changes in the frequency of air masses having originated from over the African continental surfaces, and no significant trend is found in the lower radon percentiles associated with oceanic air masses. The general decrease of atmospheric radon-associated with continental air-masses at Cape Point could be attributed to changing meteorological conditions, possibly driven by climate change.

Interaction between stream temperature, streamflow, and groundwater exchanges in alpine streams

USGS Publications Warehouse

Constantz, James E.

1998-01-01

Four alpine streams were monitored to continuously collect stream temperature and streamflow for periods ranging from a week to a year. In a small stream in the Colorado Rockies, diurnal variations in both stream temperature and streamflow were significantly greater in losing reaches than in gaining reaches, with minimum streamflow losses occurring early in the day and maximum losses occurring early in the evening. Using measured stream temperature changes, diurnal streambed infiltration rates were predicted to increase as much as 35% during the day (based on a heat and water transport groundwater model), while the measured increase in streamflow loss was 40%. For two large streams in the Sierra Nevada Mountains, annual stream temperature variations ranged from 0° to 25°C. In summer months, diurnal stream temperature variations were 30–40% of annual stream temperature variations, owing to reduced streamflows and increased atmospheric heating. Previous reports document that one Sierra stream site generally gains groundwater during low flows, while the second Sierra stream site may lose water during low flows. For August the diurnal streamflow variation was 11% at the gaining stream site and 30% at the losing stream site. On the basis of measured diurnal stream temperature variations, streambed infiltration rates were predicted to vary diurnally as much as 20% at the losing stream site. Analysis of results suggests that evapotranspiration losses determined diurnal streamflow variations in the gaining reaches, while in the losing reaches, evapotranspiration losses were compounded by diurnal variations in streambed infiltration. Diurnal variations in stream temperature were reduced in the gaining reaches as a result of discharging groundwater of relatively constant temperature. For the Sierra sites, comparison of results with those from a small tributary demonstrated that stream temperature patterns were useful in delineating discharges of bank storage following dam releases. Direct coupling may have occurred between streamflow and stream temperature for losing stream reaches, such that reduced streamflows facilitated increased afternoon stream temperatures and increased afternoon stream temperatures induced increased streambed losses, leading to even greater increases in both stream temperature and streamflow losses.

Diurnal and menstrual cycles in body temperature are regulated differently: a 28-day ambulatory study in healthy women with thermal discomfort of cold extremities and controls.

PubMed

Kräuchi, Kurt; Konieczka, Katarzyna; Roescheisen-Weich, Corina; Gompper, Britta; Hauenstein, Daniela; Schoetzau, Andreas; Fraenkl, Stephan; Flammer, Josef

2014-02-01

Diurnal cycle variations in body-heat loss and heat production, and their resulting core body temperature (CBT), are relatively well investigated; however, little is known about their variations across the menstrual cycle under ambulatory conditions. The main purpose of this study was to determine whether menstrual cycle variations in distal and proximal skin temperatures exhibit similar patterns to those of diurnal variations, with lower internal heat conductance when CBT is high, i.e. during the luteal phase. Furthermore, we tested these relationships in two groups of women, with and without thermal discomfort of cold extremities (TDCE). In total, 19 healthy eumenorrheic women with regular menstrual cycles (28-32 days), 9 with habitual TDCE (ages 29 ± 1.5 year; BMI 20.1 ± 0.4) and 10 controls without these symptoms (CON: aged 27 ± 0.8 year; BMI 22.7 ± 0.6; p < 0.004 different to TDCE) took part in the study. Twenty-eight days continuous ambulatory skin temperature measurements of distal (mean of hands and feet) and proximal (mean of sternum and infraclavicular regions) skin regions, thighs, and calves were carried out under real-life, ambulatory conditions (i-Buttons® skin probes, sampling rate: 2.5 min). The distal minus proximal skin temperature gradient (DPG) provided a valuable measure for heat redistribution from the core to the shell, and, hence, for internal heat conduction. Additionally, basal body temperature was measured sublingually directly after waking up in bed. Mean diurnal amplitudes in skin temperatures increased from proximal to distal skin regions and the 24-h mean values were inversely related. TDCE compared to CON showed significantly lower hand skin temperatures and DPG during daytime. However, menstrual cycle phase did not modify these diurnal patterns, indicating that menstrual and diurnal cycle variations in skin temperatures reveal additive effects. Most striking was the finding that all measured skin temperatures, together with basal body temperature, revealed a similar menstrual cycle variation (independent of BMI), with highest and lowest values during the luteal and follicular phases, respectively. These findings lead to the conclusion that in contrast to diurnal cycle, variations in CBT variation across the menstrual cycle cannot be explained by changes in internal heat conduction under ambulatory conditions. Although no measurements of metabolic heat production were carried out increased metabolic heat generation during the luteal phase seems to be the most plausible explanation for similar body temperature increases.

PDF-modulated visual inputs and cryptochrome define diurnal behavior in Drosophila.

PubMed

Cusumano, Paola; Klarsfeld, André; Chélot, Elisabeth; Picot, Marie; Richier, Benjamin; Rouyer, François

2009-11-01

Morning and evening circadian oscillators control the bimodal activity of Drosophila in light-dark cycles. The lateral neurons evening oscillator (LN-EO) is important for promoting diurnal activity at dusk. We found that the LN-EO autonomously synchronized to light-dark cycles through either the cryptochrome (CRY) that it expressed or the visual system. In conditions in which CRY was not activated, flies depleted for pigment-dispersing factor (PDF) or its receptor lost the evening activity and displayed reversed PER oscillations in the LN-EO. Rescue experiments indicated that normal PER cycling and the presence of evening activity relied on PDF secretion from the large ventral lateral neurons and PDF receptor function in the LN-EO. The LN-EO thus integrates light inputs and PDF signaling to control Drosophila diurnal behavior, revealing a new clock-independent function for PDF.

Patterns of cold-air drainage and microclimate in mid-latitude versus high-latitude mountains: contrasts and implications for climate change (Invited)

NASA Astrophysics Data System (ADS)

Pepin, N. C.

2009-12-01

Predictions of current spatial patterns of climate are difficult in areas of complex relief in all parts of the world, because of the interweaving influences of topography, elevation and aspect. These influences vary temporally as a result of the seasonal and diurnal cycles in radiation balance. In periods of negative energy balance, surface decoupling can occur as cold air drainage develops low-level temperature inversions, and the surface temperature regime beneath the inversion becomes divorced from free atmospheric forcing. Both the spatial scale and temporal persistence of this decoupling vary according to latitude, and although the physical processes that influence inversion formation are similar in polar areas and mid-latitude mountains, the contrasting seasonal and diurnal forcings make the end results very different. Examples are contrasted from detailed field temperature measurements (~50 sites per field area) taken over several years in areas of complex relief in the eastern Pyrenees (~42.5 deg N), the Oregon Cascades (also ~42.5 deg N) and Finnish Lapland (70 deg N and above the Arctic circle). In the former two locations decoupling is mostly diurnally driven, and small-scale topography is important in mediating the effects. Summer decoupling is brief and spatially limited, whereas winter decoupling can be more spatially extensive. There are strong relationships between synoptic conditions, as measured by objective flow indices at the 700 mb level (derived from NCEP/NCAR reanalysis fields) and the patterns of decoupling, which allow us to assess the effects of past and potential future circulation change on spatial patterns of future climate warming. In Finnish Lapland the decoupling regime most clearly approaches the mid-latitude pattern around the equinoxes when there are clear day and night periods. In winter and summer however (the polar night and polar day) with the muting of the diurnal cycle, processes are more poorly understood. Winter cold pools can develop and strengthen over days until eventually they extend over and above the topography. Strangely, there are also indistinct relationships with circulation indices at this time. While build-up can take days, destruction is often immediate and is dynamically forced. In summer, localized decoupling occurs on clear nights even though the sun is above the horizon, but micro-scale patterns are different than in mid-latitudes. The above comparison shows that polar areas are very different in their micro-temperature regimes than mid-latitude mountains and in their relationships of these regimes with circulation. Thus we expect detailed spatial patterns of climate change may be very different in the two regions.

Transient variation of martian ground-atmosphere thermal boundary layer structure.

NASA Technical Reports Server (NTRS)

Pallmann, A. J.; Dannevik, W. P.

1972-01-01

Results of a numerical simulation of the diurnal redistribution of temperature by radiative and molecular-conductive processes in the Martian soil-atmosphere system. An attempt is made to assess the importance of atmospheric molecular conduction near the surface and to estimate the characteristic depth of the diurnal temperature wave. The computational results are found to indicate a dual structure in the diurnal temperature wave propagation pattern, with a diffusive-type wave in the lowest 150 m superimposed on a radiatively induced disturbance with a characteristic scale of 1.8 km. Atmospheric molecular thermal conduction typically accounts for about 15% of the total heating/cooling in the lowest 25 m. Thermal conduction in both the soil and atmosphere appears to be an important factor in the thermal coupling of these subsystems. A free-convection regime in the conduction layer is predicted by the model for about five hours of the Martian day.

Rising sea levels will reduce extreme temperature variations in tide-dominated reef habitats.

PubMed

Lowe, Ryan Joseph; Pivan, Xavier; Falter, James; Symonds, Graham; Gruber, Renee

2016-08-01

Temperatures within shallow reefs often differ substantially from those in the surrounding ocean; therefore, predicting future patterns of thermal stresses and bleaching at the scale of reefs depends on accurately predicting reef heat budgets. We present a new framework for quantifying how tidal and solar heating cycles interact with reef morphology to control diurnal temperature extremes within shallow, tidally forced reefs. Using data from northwestern Australia, we construct a heat budget model to investigate how frequency differences between the dominant lunar semidiurnal tide and diurnal solar cycle drive ~15-day modulations in diurnal temperature extremes. The model is extended to show how reefs with tidal amplitudes comparable to their depth, relative to mean sea level, tend to experience the largest temperature extremes globally. As a consequence, we reveal how even a modest sea level rise can substantially reduce temperature extremes within tide-dominated reefs, thereby partially offsetting the local effects of future ocean warming.

Viking-1 meteorological measurements - First impressions

NASA Technical Reports Server (NTRS)

Hess, S. L.; Henry, R. M.; Leovy, C. B.; Tillman, J. E.; Ryan, J. A.

1976-01-01

A preliminary evaluation is given of in situ meteorological measurements made by Viking 1 on Mars. The data reported show that: (1) the atmosphere has approximate volume mixing ratios of 1.5% argon, 3% nitrogen, and 95% carbon dioxide; (2) the diurnal temperature range is large and regular, with a sunrise minimum of about 188 K and a midafternoon maximum near 244 K; (3) air and ground temperatures coincide quite closely during the night, but ground temperature exceeds air temperature near midday by as much as 25 C; (4) the winds exhibit a marked diurnal cycle; and (5) a large diurnal pressure variation with an afternoon minimum and an early-morning maximum parallels the wind pattern. The variations are explained in terms of familiar meteorological processes. It is suggested that latent heat is unlikely to play an important role on Mars because no evidence has been observed for traveling synoptic-scale disturbances such as those that occur in the terrestrial tropics.

Use of Salivary Diurnal Cortisol as an Outcome Measure in Randomised Controlled Trials: a Systematic Review.

PubMed

Ryan, Richella; Booth, Sara; Spathis, Anna; Mollart, Sarah; Clow, Angela

2016-04-01

Dysregulation of the hypothalamic-pituitary-adrenal (HPA) axis is associated with diverse adverse health outcomes, making it an important therapeutic target. Measurement of the diurnal rhythm of cortisol secretion provides a window into this system. At present, no guidelines exist for the optimal use of this biomarker within randomised controlled trials (RCTs). The aim of this study is to describe the ways in which salivary diurnal cortisol has been measured within RCTs of health or behavioural interventions in adults. Six electronic databases (up to May 21, 2015) were systematically searched for RCTs which used salivary diurnal cortisol as an outcome measure to evaluate health or behavioural interventions in adults. A narrative synthesis was undertaken of the findings in relation to salivary cortisol methodology and outcomes. From 78 studies that fulfilled the inclusion criteria, 30 included healthy participants (38.5 %), 27 included patients with physical disease (34.6 %) and 21 included patients with psychiatric disease (26.9 %). Psychological therapies were most commonly evaluated (n = 33, 42.3 %). There was substantial heterogeneity across studies in relation to saliva collection protocols and reported cortisol parameters. Only 39 studies (50 %) calculated a rhythm parameter such as the diurnal slope or the cortisol awakening response (CAR). Patterns of change in cortisol parameters were inconsistent both within and across studies and there was low agreement with clinical findings. Salivary diurnal cortisol is measured inconsistently across RCTs, which is limiting the interpretation of findings within and across studies. This indicates a need for more validation work, along with consensus guidelines.

The contribution of the pineal gland on daily rhythms and masking in diurnal grass rats, Arvicanthis niloticus.

PubMed

Shuboni, Dorela D; Agha, Amna A; Groves, Thomas K H; Gall, Andrew J

2016-07-01

Melatonin is a hormone rhythmically secreted at night by the pineal gland in vertebrates. In diurnal mammals, melatonin is present during the inactive phase of the rest/activity cycle, and in primates it directly facilitates sleep and decreases body temperature. However, the role of the pineal gland for the promotion of sleep at night has not yet been studied in non-primate diurnal mammalian species. Here, the authors directly examined the hypothesis that the pineal gland contributes to diurnality in Nile grass rats by decreasing activity and increasing sleep at night, and that this could occur via effects on circadian mechanisms or masking, or both. Removing the pineal gland had no effect on the hourly distribution of activity across a 12:12 light-dark (LD) cycle or on the patterns of sleep-like behavior at night. Masking effects of light at night on activity were also not significantly different in pinealectomized and control grass rats, as 1h pulses of light stimulated increases in activity of sham and pinealectomized animals to a similar extent. In addition, the circadian regulation of activity was unaffected by the surgical condition of the animals. Our results suggest that the pineal gland does not contribute to diurnality in the grass rat, thus highlighting the complexity of temporal niche transitions. The current data raise interesting questions about how and why genetic and neural mechanisms linking melatonin to sleep regulatory systems might vary among mammals that reached a diurnal niche via parallel and independent pathways. Copyright © 2016 Elsevier B.V. All rights reserved.

Diving behavior and movements of juvenile hawksbill turtles Eretmochelys imbricata on a Caribbean coral reef

NASA Astrophysics Data System (ADS)

Blumenthal, J. M.; Austin, T. J.; Bothwell, J. B.; Broderick, A. C.; Ebanks-Petrie, G.; Olynik, J. R.; Orr, M. F.; Solomon, J. L.; Witt, M. J.; Godley, B. J.

2009-03-01

As historically abundant spongivores, hawksbill turtles Eretmochelys imbricata likely played a key ecological role on coral reefs. However, coral reefs are now experiencing global declines and many hawksbill populations are critically reduced. For endangered species, tracking movement has been recognized as fundamental to management. Since movements in marine vertebrates encompass three dimensions, evaluation of diving behavior and range is required to characterize marine turtle habitat. In this study, habitat use of hawksbill turtles on a Caribbean coral reef was elucidated by quantifying diel depth utilization and movements in relation to the boundaries of marine protected areas. Time depth recorders (TDRs) and ultrasonic tags were deployed on 21 Cayman Islands hawksbills, ranging in size from 26.4 to 58.4 cm straight carapace length. Study animals displayed pronounced diel patterns of diurnal activity and nocturnal resting, where diurnal dives were significantly shorter, deeper, and more active. Mean diurnal dive depth (±SD) was 8 ± 5 m, range 2-20 m, mean nocturnal dive depth was 5 ± 5 m, range 1-14 m, and maximum diurnal dive depth was 43 ± 27 m, range 7-91 m. Larger individuals performed significantly longer dives. Body mass was significantly correlated with mean dive depth for nocturnal but not diurnal dives. However, maximum diurnal dive depth was significantly correlated with body mass, suggesting partitioning of vertical habitat by size. Thus, variable dive capacity may reduce intraspecific competition and provide resistance to degradation in shallow habitats. Larger hawksbills may also represent important predators on deep reefs, creating a broad ecological footprint over a range of depths.

Dysregulated diurnal cortisol pattern is associated with glucocorticoid resistance in women with major depressive disorder

PubMed Central

Jarcho, Michael R.; Slavich, George M.; Tylova-Stein, Hana; Wolkowitz, Owen M.; Burke, Heather M.

2013-01-01

Dysfunction of the hypothalamic–pituitary–adrenal (HPA) axis is believed to play a role in the pathophysiology of depression. To investigate mechanisms that may underlie this effect, we examined several indices of HPA axis function – specifically, diurnal cortisol slope, cortisol awakening response, and suppression of cortisol release following dexamethasone administration – in 26 pre-menopausal depressed women and 23 never depressed women who were matched for age and body mass index. Salivary cortisol samples were collected at waking, 30 min after waking, and at bedtime over three consecutive days. On the third day, immediately after the bedtime sample, participants ingested a 0.5 mg dexamethasone tablet; they then collected cortisol samples at waking and 30 min after waking the following morning. As predicted, depressed women exhibited flatter diurnal cortisol rhythms and more impaired suppression of cortisol following dexamethasone administration than non-depressed women over the three sampling days. In addition, flatter diurnal cortisol slopes were associated with reduced cortisol response to dexamethasone treatment, both for all women and for depressed women when considered separately. Finally, greater self-reported depression severity was associated with flatter diurnal cortisol slopes and with less dexamethasone-related cortisol suppression for depressed women. Depression in women thus appears to be characterized by altered HPA axis functioning, as indexed by flatter diurnal cortisol slopes and an associated impaired sensitivity of cortisol to dexamethasone. Given that altered HPA axis functioning has been implicated in several somatic conditions, the present findings may be relevant for understanding the pathophysiology of both depression and depression-related physical disease. PMID:23410758

A model for diurnal patterns of carbon fixation in a Precambrian microbial mat based on a modern analog

NASA Technical Reports Server (NTRS)

Rothschild, L. J.

1991-01-01

Microbial mat communities are one of the first and most prevalent biological communities known from the Precambrian fossil record. These fossil mat communities are found as laminated sedimentary rock structures called stromatolites. Using a modern microbial mat as an analog for Precambrian stromatolites, a study of carbon fixation during a diurnal cycle under ambient conditions was undertaken. The rate of carbon fixation depends primarily on the availability of light (consistent with photosynthetic carbon fixation) and inorganic carbon, and not nitrogen or phosphorus. Atmospheric PCO2 is thought to have decreased from 10 bars at 4 Ga (10(9) years before present) to approximately 10(-4) bars today, implying a change in the availability of inorganic carbon for carbon fixation. Experimental manipulation of levels of inorganic carbon to levels that may have been available to Precambrian mat communities resulted in increased levels of carbon fixation during daylight hours. Combining these data with models of daylength during the Precambrian, models are derived for diurnal patterns of photosynthetic carbon fixation in a Precambrian microbial mat community. The models suggest that, even in the face of shorter daylengths during the Precambrian, total daily carbon fixation has been declining over geological time, with most of the decrease having occurred during the Precambrian.

Effects of a Therapeutic Intervention for Foster Preschoolers on Diurnal Cortisol Activity

PubMed Central

Fisher, Philip A.; Stoolmiller, Mike; Gunnar, Megan R.; Burraston, Bert O.

2007-01-01

Atypical diurnal patterns of hypothalamic-pituitary-adrenal (HPA) axis activity have been observed samples of individuals following early life adversity. A characteristic pattern arising from disrupted caregiving is a low early morning cortisol level that changes little from morning to evening. Less well understood is the plasticity of the HPA axis in response to subsequent supportive caregiving environments. Monthly early morning and evening cortisol levels were assessed over 12 months in a sample of 3- to 6-year-old foster children enrolled in a randomized trial of a family-based therapeutic intervention (N = 117; intervention condition n = 57; regular foster care condition n = 60), and a community comparison group of same-aged, nonmaltreated children from low-income families (n = 60). Latent growth analyses revealed stable and typical diurnal (morning-to-evening) cortisol activity among community comparison children. Foster children in the intervention condition exhibited cortisol activity that became comparable to the comparison group children over the course of the study. In contrast, children in regular foster care condition exhibited increasingly flattened morning-to-evening cortisol activity over the course of the study. In sum, improvements in caregiving following early adversity appear to have the potential to reverse or prevent disruptions in HPA axis functioning. PMID:17656028

Relationships between surface solar radiation and wheat yield in Spain

NASA Astrophysics Data System (ADS)

Hernandez-Barrera, Sara; Rodriguez-Puebla, Concepción

2017-04-01

Here we examine the role of solar radiation to describe wheat-yield variability in Spain. We used Partial Least Square regression to capture the modes of surface solar radiation that drive wheat-yield variability. We will show that surface solar radiation introduces the effects of teleconnection patterns on wheat yield and also it is associated with drought and diurnal temperature range. We highlight the importance of surface solar radiation to obtain models for wheat-yield projections because it could reduce uncertainty with respect to the projections based on temperatures and precipitation variables. In addition, the significance of the model based on surface solar radiation is greater than the previous one based on drought and diurnal temperature range (Hernandez-Barrera et al., 2016). According to our results, the increase of solar radiation over Spain for 21st century could force a wheat-yield decrease (Hernandez-Barrera et al., 2017). Hernandez-Barrera S., Rodríguez-Puebla C. and Challinor A.J. 2016 Effects of diurnal temperature range and drought on wheat yield in Spain. Theoretical and Applied Climatology. DOI: 10.1007/s00704-016-1779-9 Hernandez-Barrera S., Rodríguez-Puebla C. 2017 Wheat yield in Spain and associated solar radiation patterns. International Journal of Climatology. DOI: 10.1002/joc.4975

Hydrology controls dissolved organic matter export and composition in an Alpine stream and its hyporheic zone.

PubMed

Fasching, Christina; Ulseth, Amber J; Schelker, Jakob; Steniczka, Gertraud; Battin, Tom J

2016-03-01

Streams and rivers transport dissolved organic matter (DOM) from the terrestrial environment to downstream ecosystems. In light of climate and global change it is crucial to understand the temporal dynamics of DOM concentration and composition, and its export fluxes from headwaters to larger downstream ecosystems. We monitored DOM concentration and composition based on a diurnal sampling design for 3 years in an Alpine headwater stream. We found hydrologic variability to control DOM composition and the coupling of DOM dynamics in the streamwater and the hyporheic zone. High-flow events increased DOM inputs from terrestrial sources (as indicated by the contributions of humic- and fulvic-like fluorescence), while summer baseflow enhanced the autochthonous imprint of DOM. Diurnal and seasonal patterns of DOM composition were likely induced by biological processes linked to temperature and photosynthetic active radiation (PAR). Floods frequently interrupted diurnal and seasonal patterns of DOM, which led to a decoupling of streamwater and hyporheic water DOM composition and delivery of aromatic and humic-like DOM to the streamwater. Accordingly, DOM export fluxes were largely of terrigenous origin as indicated by optical properties. Our study highlights the relevance of hydrologic and seasonal dynamics for the origin, composition and fluxes of DOM in an Alpine headwater stream.

Recovery from adolescent anorexia nervosa and associations with diurnal patterns of salivary stress hormones: a case report.

PubMed

Oskis, Andrea; Loveday, Catherine; Hucklebridge, Frank; Wood, David; Clow, Angela

2012-01-01

In the neurodevelopment of adolescent anorexia nervosa (AN), dysregulation of the hypothalamic-pituitary-adrenal (HPA) axis is proposed to be a central component. Furthermore, a therapeutic milieu focusing on affect regulation can contribute much to treatment, given the emotional processing difficulties associated with this disorder. Studies of HPA axis function following such specialist treatments for adolescent AN, however, are rare. This study describes the diurnal pattern of HPA axis activation, including the cortisol awakening response (CAR), in a 16-year-old female diagnosed with AN both during illness and at clinical recovery following milieu therapy with a focus on affect regulation. Specialised single-case study statistics were used to assess whether the patient's data were significantly different from the healthy "norm" at illness and recovery. During illness, her measure of affective problems was outside of the normal range and cortisol and DHEA secretory profiles were significantly elevated across the diurnal period. However, at recovery both her affective state and HPA axis function became comparable to healthy controls. This case study suggests that salivary markers of HPA axis function can be feasibly incorporated into the clinical regime within a specialist adolescent AN residential service and could be used by clinicians to monitor prognosis and interventions.

Theory and case studies on solar induced seismicity

NASA Astrophysics Data System (ADS)

Duma, Gerald; Freund, Friedemann; Kosovichev, Pavel

2015-04-01

Huge electric current vortices are continuously generated in the Earth's lithosphere through electromagnetic induction from powerful ionospheric electric vortex currents that arise from ionization on the sun-lit side of the Earth (Chapman S. and Bartels J., 1940). The circular telluric currents in the Earth's lithosphere interact with the Earth's main magnetic field (H), building up a magnetic moment (M). According to T = [M x H] a mechanic torque (T) results from this interaction that can reach values as high as 5x10exp13 Nm (Duma G. and Ruzhin Y., 2003). We present evidence that this ionospherically induced telluric torque, which reaches deep into the lithosphere, influences the diurnal seismicity patterns in major earthquake zones as documented by earthquakes with magnitudes M ≥ 6.0. Our results confirm observations of distinct time-of-day patterns of seismic activity reported for over a century (Omori F., 1902; Conrad V., 1932 ; Shimshoni M., 1971; Duma G. and Vilardo G., 1998; Schekotov A.Yu., Molchanov O.A. and Hayakawa M., 2005) and even much earlier by Pliny the Elder, 79 A.D. A solar influence on earthquake frequency is apparent not only in diurnal patterns, but also in seasonal (e.g. Lipovics T., 2005) and decadal patterns. The effect can be validated by data recorded continuously at geomagnetic observatories, the INTERMAGNET stations (http://www.intermagnet.org), operating on all continents. The observatories continuously record magnetic variations which arise from the telluric currents in the Earth's lithosphere. Theory and model are presented, starting from the primary source for the effect, which is the varying solar wind speed as measured by satellites. The data are provided by the OMNI 2 directory (NASA, http://omniweb.gsfc.nasa.gov). We offer 7 case studies that deal with seismic activity patterns in the diurnal, seasonal and long term time domains for seismic zones in Asia (Japan, Taiwan, Sumatra), N-America (California), the Mid Atlantic Ridge, the Red Sea and Europe (Austria).

Thermal equilibrium of Nellore cattle in tropical conditions: an investigation of circadian pattern

USDA-ARS?s Scientific Manuscript database

The aim of this work was to evaluate the diurnal patterns of physiological responses and the thermal regulation of adult Nellore bulls. Six 30-mo-old Nellore bulls (669 ± 65 kg BW) were randomly assigned to four 6-h periods in a Latin Square design such that measurements of each animal cover a 24-h ...

Diel activity patterns of the Louisiana pine snakes (Pituophis ruthveni) in eastern Texas

Treesearch

Marc J. Ealy; Robert R. Fleet; D. Craig Rudolph

2004-01-01

This study examined the diel activity patterns of six Louisiana pine snakes in eastern Texas using radio-telemetry. snakes were monitored for 44 days on two study areas from May to October 1996. Louisana pine snakes were primarily diurnal with moderate crepuscular activity, spending the night within pocket gopher burrows or inactive on the surface. During daylight...

Neural coding underlying the cue preference for celestial orientation

PubMed Central

el Jundi, Basil; Warrant, Eric J.; Byrne, Marcus J.; Khaldy, Lana; Baird, Emily; Smolka, Jochen; Dacke, Marie

2015-01-01

Diurnal and nocturnal African dung beetles use celestial cues, such as the sun, the moon, and the polarization pattern, to roll dung balls along straight paths across the savanna. Although nocturnal beetles move in the same manner through the same environment as their diurnal relatives, they do so when light conditions are at least 1 million-fold dimmer. Here, we show, for the first time to our knowledge, that the celestial cue preference differs between nocturnal and diurnal beetles in a manner that reflects their contrasting visual ecologies. We also demonstrate how these cue preferences are reflected in the activity of compass neurons in the brain. At night, polarized skylight is the dominant orientation cue for nocturnal beetles. However, if we coerce them to roll during the day, they instead use a celestial body (the sun) as their primary orientation cue. Diurnal beetles, however, persist in using a celestial body for their compass, day or night. Compass neurons in the central complex of diurnal beetles are tuned only to the sun, whereas the same neurons in the nocturnal species switch exclusively to polarized light at lunar light intensities. Thus, these neurons encode the preferences for particular celestial cues and alter their weighting according to ambient light conditions. This flexible encoding of celestial cue preferences relative to the prevailing visual scenery provides a simple, yet effective, mechanism for enabling visual orientation at any light intensity. PMID:26305929

Neural coding underlying the cue preference for celestial orientation.

PubMed

el Jundi, Basil; Warrant, Eric J; Byrne, Marcus J; Khaldy, Lana; Baird, Emily; Smolka, Jochen; Dacke, Marie

2015-09-08

Diurnal and nocturnal African dung beetles use celestial cues, such as the sun, the moon, and the polarization pattern, to roll dung balls along straight paths across the savanna. Although nocturnal beetles move in the same manner through the same environment as their diurnal relatives, they do so when light conditions are at least 1 million-fold dimmer. Here, we show, for the first time to our knowledge, that the celestial cue preference differs between nocturnal and diurnal beetles in a manner that reflects their contrasting visual ecologies. We also demonstrate how these cue preferences are reflected in the activity of compass neurons in the brain. At night, polarized skylight is the dominant orientation cue for nocturnal beetles. However, if we coerce them to roll during the day, they instead use a celestial body (the sun) as their primary orientation cue. Diurnal beetles, however, persist in using a celestial body for their compass, day or night. Compass neurons in the central complex of diurnal beetles are tuned only to the sun, whereas the same neurons in the nocturnal species switch exclusively to polarized light at lunar light intensities. Thus, these neurons encode the preferences for particular celestial cues and alter their weighting according to ambient light conditions. This flexible encoding of celestial cue preferences relative to the prevailing visual scenery provides a simple, yet effective, mechanism for enabling visual orientation at any light intensity.

Gene Expression in Plant Lipid Metabolism in Arabidopsis Seedlings

PubMed Central

Hsiao, An-Shan; Haslam, Richard P.; Michaelson, Louise V.; Liao, Pan; Napier, Johnathan A.; Chye, Mee-Len

2014-01-01

Events in plant lipid metabolism are important during seedling establishment. As it has not been experimentally verified whether lipid metabolism in 2- and 5-day-old Arabidopsis thaliana seedlings is diurnally-controlled, quantitative real-time PCR analysis was used to investigate the expression of target genes in acyl-lipid transfer, β-oxidation and triacylglycerol (TAG) synthesis and hydrolysis in wild-type Arabidopsis WS and Col-0. In both WS and Col-0, ACYL-COA-BINDING PROTEIN3 (ACBP3), DIACYLGLYCEROL ACYLTRANSFERASE1 (DGAT1) and DGAT3 showed diurnal control in 2- and 5-day-old seedlings. Also, COMATOSE (CTS) was diurnally regulated in 2-day-old seedlings and LONG-CHAIN ACYL-COA SYNTHETASE6 (LACS6) in 5-day-old seedlings in both WS and Col-0. Subsequently, the effect of CIRCADIAN CLOCK ASSOCIATED1 (CCA1) and LATE ELONGATED HYPOCOTYL (LHY) from the core clock system was examined using the cca1lhy mutant and CCA1-overexpressing (CCA1-OX) lines versus wild-type WS and Col-0, respectively. Results revealed differential gene expression in lipid metabolism between 2- and 5-day-old mutant and wild-type WS seedlings, as well as between CCA1-OX and wild-type Col-0. Of the ACBPs, ACBP3 displayed the most significant changes between cca1lhy and WS and between CCA1-OX and Col-0, consistent with previous reports that ACBP3 is greatly affected by light/dark cycling. Evidence of oil body retention in 4- and 5-day-old seedlings of the cca1lhy mutant in comparison to WS indicated the effect of cca1lhy on storage lipid reserve mobilization. Lipid profiling revealed differences in primary lipid metabolism, namely in TAG, fatty acid methyl ester and acyl-CoA contents amongst cca1lhy, CCA1-OX, and wild-type seedlings. Taken together, this study demonstrates that lipid metabolism is subject to diurnal regulation in the early stages of seedling development in Arabidopsis. PMID:25264899

Movements and bioenergetics of canvasbacks wintering in the upper Chesapeake Bay

USGS Publications Warehouse

Howerter, D.W.

1990-01-01

The movement patterns, range areas and energetics of canvasbacks (Aythya valisineria) wintering in the upper Chesapeake Bay, Maryland, were investigated. Eighty-seven juvenile female canvasbacks were radio-tracked between 30 December 1988 and 25 March 1989. Diurnal time and energy budgets were constructed for a time of day-season matrix for canvasbacks using riverine and main bay habitats. Canvasbacks were very active at night, making regular and often lengthy crepuscular movements (x = 11.7 km) from near shore habitats during the day to off shore habitats at night. Movement patterns were similar for birds using habitats on the eastern and western shores of the Bay. Canvasbacks had extensive home ranges averaging 14,286 ha, and used an average of 1.97 core areas. Sleeping was the predominant diurnal behavior. Telemetry indicated that canvasbacks actively fed at night. Canvasbacks spent more time in active behaviors (e.g. swimming, alert) on the eastern shore than on the western shore. Similarly, canvasbacks were more active during daytime hours at locations where artificial feeding occurred. Behavioral patterns were only weakly correlated with weather patterns. Canvasbacks appeared to reduce energy expenditure in mid-winter by reducing distances moved, reducing feeding activities and increasing the amount of time spent sleeping. This pattern was observed even though 1988-89 mid-winter weather conditions were very mild.

Evolutionary transformation of rod photoreceptors in the all-cone retina of a diurnal garter snake

PubMed Central

Schott, Ryan K.; Müller, Johannes; Yang, Clement G. Y.; Bhattacharyya, Nihar; Chan, Natalie; Xu, Mengshu; Morrow, James M.; Ghenu, Ana-Hermina; Loew, Ellis R.; Tropepe, Vincent; Chang, Belinda S. W.

2016-01-01

Vertebrate retinas are generally composed of rod (dim-light) and cone (bright-light) photoreceptors with distinct morphologies that evolved as adaptations to nocturnal/crepuscular and diurnal light environments. Over 70 years ago, the “transmutation” theory was proposed to explain some of the rare exceptions in which a photoreceptor type is missing, suggesting that photoreceptors could evolutionarily transition between cell types. Although studies have shown support for this theory in nocturnal geckos, the origins of all-cone retinas, such as those found in diurnal colubrid snakes, remain a mystery. Here we investigate the evolutionary fate of the rods in a diurnal garter snake and test two competing hypotheses: (i) that the rods, and their corresponding molecular machinery, were lost or (ii) that the rods were evolutionarily modified to resemble, and function, as cones. Using multiple approaches, we find evidence for a functional and unusually blue-shifted rhodopsin that is expressed in small single “cones.” Moreover, these cones express rod transducin and have rod ultrastructural features, providing strong support for the hypothesis that they are not true cones, as previously thought, but rather are modified rods. Several intriguing features of garter snake rhodopsin are suggestive of a more cone-like function. We propose that these cone-like rods may have evolved to regain spectral sensitivity and chromatic discrimination as a result of ancestral losses of middle-wavelength cone opsins in early snake evolution. This study illustrates how sensory evolution can be shaped not only by environmental constraints but also by historical contingency in forming new cell types with convergent functionality. PMID:26715746

Developmental and diurnal expression of the synaptosomal-associated protein 25 (Snap25) in the rat pineal gland.

PubMed

Karlsen, Anna S; Rath, Martin F; Rohde, Kristian; Toft, Trine; Møller, Morten

2013-06-01

Snap25 (synaptosomal-associated protein) is a 25 kDa protein, belonging to the SNARE-family (soluble N-ethylmaleimide-sensitive factor attachment protein receptors) of proteins, essential for synaptic and secretory vesicle exocytosis. Snap25 has by immunohistochemistry been demonstrated in the rat pineal gland but the biological importance of this is unknown. In this study, we demonstrate a high expression of mRNA encoding Snap25 in all parts of the rat pineal complex, the superficial-, and deep-pineal gland, as well as in the pineal stalk. Snap25 showed a low pineal expression during embryonic stages with a strong increase in expression levels just after birth. The expression showed no day/night variations. Neither removal of the sympathetic input to the pineal gland by superior cervical ganglionectomy nor bilateral decentralization of the superior cervical ganglia significantly affected the expression of Snap25 in the gland. The pineal expression levels of Snap25 were not changed following intraperitoneal injection of isoproterenol. The strong expression of Snap25 in the pineal gland suggests the presence of secretory granules and microvesicles in the rat pinealocyte supporting the concept of a vesicular release. At the transcriptional level, this Snap25-based release mechanism does not exhibit any diurnal rhythmicity and is regulated independently of the sympathetic nervous input to the gland.

Patterns of morning and evening fatigue among adults with HIV/AIDS.

PubMed

Lerdal, Anners; Gay, Caryl L; Aouizerat, Bradley E; Portillo, Carmen J; Lee, Kathryn A

2011-08-01

Describe patterns of morning and evening fatigue in adults with HIV and examine their relationship to demographic and clinical factors and other symptoms. Most studies of HIV-related fatigue assess average levels of fatigue and do not address its diurnal fluctuations. Patterns of fatigue over the course of the day may have important implications for assessment and treatment. A cross-sectional, correlational design was used with six repeated measures over 72 hours. A convenience sample of 318 HIV-infected adults was recruited in San Francisco. Socio-demographic, clinical and symptom data were collected with questionnaires. CD4+ T-cell count and viral load were obtained from medical records. Participants completed a four-item version of the Lee Fatigue Scale each morning and evening for three consecutive days. Participants were grouped based on their diurnal pattern of fatigue (high evening only, high morning only, high morning and evening and low morning and evening). Group comparisons and logistic regression were used to determine the unique predictors of each fatigue pattern. The high evening fatigue pattern was associated with anxiety and the high morning pattern was associated with anxiety and depression. The morning fatigue pattern showed very little fluctuation between morning and evening, the evening pattern showed the largest fluctuation. The high morning and evening pattern was associated with anxiety, depression and sleep disturbance and this group reported the most fatigue-related distress and interference in functioning. These results provide initial evidence for the importance of assessing the patient's daily pattern of fatigue fluctuation, as different patterns were associated with different symptom experiences and perhaps different aetiologies. Different fatigue patterns may benefit from tailored intervention strategies. Management of depressive symptoms could be tested in patients who experience high levels of morning fatigue. © 2011 Blackwell Publishing Ltd.

A diffusion climatology for Cape Canaveral, Florida

NASA Technical Reports Server (NTRS)

Siler, R. K.

1980-01-01

The problem of toxic effluent released by a space shuttle launch on local plant and animal life is discussed. Based on several successive years of data, nine basic weather patterns were identified, and the probabilities of pattern occurrence, of onshore/alongshore cloud transport, of precipitation accompanying the latter, and of ground-level concentrations of hydrogen chloride were determined. Diurnal variations for the patterns were also investigated. Sketches showing probable movement of launch cloud exhaust and isobaric maps are presented.

Seasonal and Diel Activity Patterns of Eight Sympatric Mammals in Northern Japan Revealed by an Intensive Camera-Trap Survey.

PubMed

Ikeda, Takashi; Uchida, Kenta; Matsuura, Yukiko; Takahashi, Hiroshi; Yoshida, Tsuyoshi; Kaji, Koichi; Koizumi, Itsuro

2016-01-01

The activity patterns of mammals are generally categorized as nocturnal, diurnal, crepuscular (active at twilight), and cathemeral (active throughout the day). These patterns are highly variable across regions and seasons even within the same species. However, quantitative data is still lacking, particularly for sympatric species. We monitored the seasonal and diel activity patterns of terrestrial mammals in Hokkaido, Japan. Through an intensive camera-trap survey a total of 13,279 capture events were recorded from eight mammals over 20,344 camera-trap days, i.e., two years. Diel activity patterns were clearly divided into four categories: diurnal (Eurasian red squirrels), nocturnal (raccoon dogs and raccoons), crepuscular (sika deer and mountain hares), and cathemeral (Japanese martens, red foxes, and brown bears). Some crepuscular and cathemeral mammals shifted activity peaks across seasons. Particularly, sika deer changed peaks from twilight during spring-autumn to day-time in winter, possibly because of thermal constraints. Japanese martens were cathemeral during winter-summer, but nocturnal in autumn. We found no clear indication of predator-prey and competitive interactions, suggesting that animal densities are not very high or temporal niche partitioning is absent among the target species. This long-term camera-trap survey was highly cost-effective and provided one of the most detailed seasonal and diel activity patterns in multiple sympatric mammals under natural conditions.

Seasonal and diurnal patterns of soil water potential in the rhizosphere of blue oaks: evidence for hydraulic lift.

PubMed

Ishikawa, C Millikin; Bledsoe, C S

2000-12-01

In a 3-year study, seasonal and daily soil water fluctuations in a California blue oak woodland were investigated by measuring soil water potential (Ψ s ) at hourly intervals. Soil water potential remained relatively high well into the annual summer drought, with values above -0.5 MPa until June even in a dry year. As drought progressed, Ψ s (at 25, 50, 75, and 100 cm depth) decreased to less than -3 MPa, providing evidence for continued blue oak root activity throughout the summer. We observed diurnal Ψ s fluctuations (gradual increase at night and rapid decrease during daytime) characteristic of hydraulic lift, a process by which plant roots redistribute water from wet to dry soil layers. These diurnal fluctuations were observed at all four soil depths and began to appear when Ψ s reached approximately -0.3 MPa. When Ψ s reached approximately -3 MPa, fluctuations became "offset" from those typical of hydraulic lift. These offset fluctuations (apparent at low water potentials when temperature fluctuations were large) closely followed diurnal fluctuations in soil temperature. We propose that these offset patterns resulted from a combination of hydraulic lift cessation and an over-correction for temperature in the model used to calculate Ψ s from raw sensor data. The appearance and disappearance of hydraulic lift fluctuations seemed to depend on Ψ s . While soil temperatures and dates at which hydraulic lift appeared (and disappeared) were significantly different between wet and dry years, Ψ s values associated with hydraulic lift appearance were not significantly different. Hydraulic lift occurred too late in summer to benefit annual forage grasses. However, water released by blue oak trees at night could slow the rate of soil water depletion and extend blue oaks' growing season.

Individual-Based Ant-Plant Networks: Diurnal-Nocturnal Structure and Species-Area Relationship

PubMed Central

Dáttilo, Wesley; Fagundes, Roberth; Gurka, Carlos A. Q.; Silva, Mara S. A.; Vieira, Marisa C. L.; Izzo, Thiago J.; Díaz-Castelazo, Cecília; Del-Claro, Kleber; Rico-Gray, Victor

2014-01-01

Despite the importance and increasing knowledge of ecological networks, sampling effort and intrapopulation variation has been widely overlooked. Using continuous daily sampling of ants visiting three plant species in the Brazilian Neotropical savanna, we evaluated for the first time the topological structure over 24 h and species-area relationships (based on the number of extrafloral nectaries available) in individual-based ant-plant networks. We observed that diurnal and nocturnal ant-plant networks exhibited the same pattern of interactions: a nested and non-modular pattern and an average level of network specialization. Despite the high similarity in the ants’ composition between the two collection periods, ant species found in the central core of highly interacting species totally changed between diurnal and nocturnal sampling for all plant species. In other words, this “night-turnover” suggests that the ecological dynamics of these ant-plant interactions can be temporally partitioned (day and night) at a small spatial scale. Thus, it is possible that in some cases processes shaping mutualistic networks formed by protective ants and plants may be underestimated by diurnal sampling alone. Moreover, we did not observe any effect of the number of extrafloral nectaries on ant richness and their foraging on such plants in any of the studied ant-plant networks. We hypothesize that competitively superior ants could monopolize individual plants and allow the coexistence of only a few other ant species, however, other alternative hypotheses are also discussed. Thus, sampling period and species-area relationship produces basic information that increases our confidence in how individual-based ant-plant networks are structured, and the need to consider nocturnal records in ant-plant network sampling design so as to decrease inappropriate inferences. PMID:24918750

Ionospheric acoustic and gravity wave activity above low-latitude thunderstorms

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lay, Erin Hoffmann

In this report, we study the correlation between thunderstorm activity and ionospheric gravity and acoustic waves in the low-latitude ionosphere. We use ionospheric total electron content (TEC) measurements from the Low Latitude Ionospheric Sensor Network (LISN) and lightning measurements from the World- Wide Lightning Location Network (WWLLN). We find that ionospheric acoustic waves show a strong diurnal pattern in summer, peaking in the pre-midnight time period. However, the peak magnitude does not correspond to thunderstorm area, and the peak time is significantly after the peak in thunderstorm activity. Wintertime acoustic wave activity has no discernable pattern in these data. Themore » coverage area of ionospheric gravity waves in the summer was found to increase with increasing thunderstorm activity. Wintertime gravity wave activity has an observable diurnal pattern unrelated to thunderstorm activity. These findings show that while thunderstorms are not the only, or dominant source of ionospheric perturbations at low-latitudes, they do have an observable effect on gravity wave activity and could be influential in acoustic wave activity.« less

Social media fingerprints of unemployment.

PubMed

Llorente, Alejandro; Garcia-Herranz, Manuel; Cebrian, Manuel; Moro, Esteban

2015-01-01

Recent widespread adoption of electronic and pervasive technologies has enabled the study of human behavior at an unprecedented level, uncovering universal patterns underlying human activity, mobility, and interpersonal communication. In the present work, we investigate whether deviations from these universal patterns may reveal information about the socio-economical status of geographical regions. We quantify the extent to which deviations in diurnal rhythm, mobility patterns, and communication styles across regions relate to their unemployment incidence. For this we examine a country-scale publicly articulated social media dataset, where we quantify individual behavioral features from over 19 million geo-located messages distributed among more than 340 different Spanish economic regions, inferred by computing communities of cohesive mobility fluxes. We find that regions exhibiting more diverse mobility fluxes, earlier diurnal rhythms, and more correct grammatical styles display lower unemployment rates. As a result, we provide a simple model able to produce accurate, easily interpretable reconstruction of regional unemployment incidence from their social-media digital fingerprints alone. Our results show that cost-effective economical indicators can be built based on publicly-available social media datasets.

Social Media Fingerprints of Unemployment

PubMed Central

Llorente, Alejandro; Garcia-Herranz, Manuel; Cebrian, Manuel; Moro, Esteban

2015-01-01

Recent widespread adoption of electronic and pervasive technologies has enabled the study of human behavior at an unprecedented level, uncovering universal patterns underlying human activity, mobility, and interpersonal communication. In the present work, we investigate whether deviations from these universal patterns may reveal information about the socio-economical status of geographical regions. We quantify the extent to which deviations in diurnal rhythm, mobility patterns, and communication styles across regions relate to their unemployment incidence. For this we examine a country-scale publicly articulated social media dataset, where we quantify individual behavioral features from over 19 million geo-located messages distributed among more than 340 different Spanish economic regions, inferred by computing communities of cohesive mobility fluxes. We find that regions exhibiting more diverse mobility fluxes, earlier diurnal rhythms, and more correct grammatical styles display lower unemployment rates. As a result, we provide a simple model able to produce accurate, easily interpretable reconstruction of regional unemployment incidence from their social-media digital fingerprints alone. Our results show that cost-effective economical indicators can be built based on publicly-available social media datasets. PMID:26020628

Polymorphism in the PER3 promoter associates with diurnal preference and delayed sleep phase disorder.

PubMed

Archer, Simon N; Carpen, Jayshan D; Gibson, Mark; Lim, Gim Hui; Johnston, Jonathan D; Skene, Debra J; von Schantz, Malcolm

2010-05-01

To screen the PER3 promoter for polymorphisms and investigate the phenotypic associations of these polymorphisms with diurnal preference, delayed sleep phase disorder/syndrome (DSPD/DSPS), and their effects on reporter gene expression. Interspecific comparison was used to define the approximate extent of the PER3 promoter as the region between the transcriptional start site and nucleotide position -874. This region was screened in DNA pools using PCR and direct sequencing, which was also used to screen DNA from individual participants. The different promoter alleles were cloned into a luciferase expression vector and a deletion library created. Promoter activation was measured by chemiluminescence. N/A. DNA samples were obtained from volunteers with defined diurnal preference (3 x 80, selected from a pool of 1,590), and DSPD patients (n=23). N/A. We verified three single nucleotide polymorphisms (G -320T, C -319A, G -294A), and found a novel variable number tandem repeat (VNTR) polymorphism (-318 1/2 VNTR). The -320T and -319A alleles occurred more frequently in DSPD compared to morning (P = 0.042 for each) or evening types (P = 0.006 and 0.033). The allele combination TA2G was more prevalent in DSPD compared to morning (P 0.033) or evening types (P = 0.002). Luciferase expression driven by the TA2G combination was greater than for the more common GC2A (P < 0.05) and the rarer TA1G (P < 0.001) combinations. Deletion reporter constructs identified two enhancer regions (-703 to -605, and -283 to -80). Polymorphisms in the PER3 promoter could affect its expression, leading to potential differences in the observed functions of PER3.

Arabidopsis florigen FT binds to diurnally oscillating phospholipids that accelerate flowering.

PubMed

Nakamura, Yuki; Andrés, Fernando; Kanehara, Kazue; Liu, Yu-chi; Dörmann, Peter; Coupland, George

2014-04-04

Arabidopsis FT protein is a component of florigen, which transmits photoperiodic flowering signals from leaf companion cells to the shoot apex. Here, we show that FT specifically binds phosphatidylcholine (PC) in vitro. A transgenic approach to increase PC levels in vivo in the shoot meristem accelerates flowering whereas reduced PC levels delay flowering, demonstrating that PC levels are correlated with flowering time. The early flowering is related to FT activity, because expression of FT-effector genes is increased in these plants. Simultaneous increase of FT and PC in the shoot apical meristem further stimulates flowering, whereas a loss of FT function leads to an attenuation of the effect of increased PC. Specific molecular species of PC oscillate diurnally, and night-dominant species are not the preferred ligands of FT. Elevating night-dominant species during the day delays flowering. We suggest that FT binds to diurnally changing molecular species of PC to promote flowering.

Extensive circadian and light regulation of the transcriptome in the malaria mosquito Anopheles gambiae

PubMed Central

2013-01-01

Background Mosquitoes exhibit 24 hr rhythms in flight activity, feeding, reproduction and development. To better understand the molecular basis for these rhythms in the nocturnal malaria vector Anopheles gambiae, we have utilized microarray analysis on time-of-day specific collections of mosquitoes over 48 hr to explore the coregulation of gene expression rhythms by the circadian clock and light, and compare these with the 24 hr rhythmic gene expression in the diurnal Aedes aegypti dengue vector mosquito. Results In time courses from An. gambiae head and body collected under light:dark cycle (LD) and constant dark (DD) conditions, we applied three algorithms that detect sinusoidal patterns and an algorithm that detects spikes in expression. This revealed across four experimental conditions 393 probes newly scored as rhythmic. These genes correspond to functions such as metabolic detoxification, immunity and nutrient sensing. This includes glutathione S-transferase GSTE5, whose expression pattern and chromosomal location are shared with other genes, suggesting shared chromosomal regulation; and pulsatile expression of the gene encoding CYP6M2, a cytochrome P450 that metabolizes pyrethroid insecticides. We explored the interaction of light and the circadian clock and highlight the regulation of odorant binding proteins (OBPs), important components of the olfactory system. We reveal that OBPs have unique expression patterns as mosquitoes make the transition from LD to DD conditions. We compared rhythmic expression between An. gambiae and Ae. aegypti heads collected under LD conditions using a single cosine fitting algorithm, and report distinct similarities and differences in the temporal regulation of genes involved in tRNA priming, the vesicular-type ATPase, olfaction and vision between the two species. Conclusions These data build on our previous analyses of time-of-day specific regulation of the An. gambiae transcriptome to reveal additional rhythmic genes, an improved understanding of the co-regulation of rhythms in gene expression by the circadian clock and by light, and an understanding of the time-of-day specific regulation of some of these rhythmic processes in comparison with a different species of mosquito. Improved understanding of biological timing at the molecular level that underlies key physiological aspects of mosquito vectors may prove to be important to successful implementation of established and novel insect control methods. PMID:23552056

Circadian oscillation of starch branching enzyme gene expression in the sorghum endosperm

DOE Office of Scientific and Technical Information (OSTI.GOV)

Mutisya, J.; Sun, C.; Jansson, C.

2009-08-31

Expression of the three SBE genes, encoding starch branching enzymes, in the sorghum endosperm exhibited a diurnal rhythm during a 24-h cycle. Remarkably, the oscillation in SBE expression was maintained in cultured spikes after a 48-h dark treatment, also when fed a continuous solution of sucrose or abscisic acid. Our findings suggest that the rhythmicity in SBE expression in the endosperm is independent of cues from the photosynthetic source and that the oscillator resides within the endosperm itself.

Waves in the Mesosphere of Venus as seen by the Venus Express Radio Science Experiment VeRa

NASA Astrophysics Data System (ADS)

Tellmann, Silvia; Häusler, B.; Hinson, D. P.; Tyler, G.; Andert, T. P.; Bird, M. K.; Imamura, T.; Pätzold, M.; Remus, S.

2013-10-01

The Venus Express Radio Science Experiment (VeRa) has retrieved more than 700 profiles of the mesosphere and troposphere of Venus. These profiles cover a wide range of latitudes and local times, enabling study of atmospheric wave phenomena over a range spatial scales at altitudes of 40-90 km. In addition to quasi-horizontal waves and eddies on near planetary scales, diurnally forced eddies and thermal tides, small-scale gravity waves, and turbulence play a significant role in the development and maintenance of atmospheric super-rotation. Small-scale temperature variations with vertical wavelengths of 4 km or less have wave amplitudes reaching TBD km in the stable atmosphere above the tropopause, in contrast with much weaker temperature perturbations observed in the middle cloud layer below. The strength of gravity waves increases with latitude in both hemispheres. The results suggest that convection at low latitudes and topographical forcing at high northern latitudes—possibly in combination with convection and/or Kelvin-Helmholtz instabilities—play key roles in the genesis of gravity waves. Further, thermal tides also play an important role in the mesosphere. Diurnal and semi-diurnal wave modes are observed at different latitudes and altitudes. The latitudinal and height dependence of the thermal tide modes will be investigated.

Diurnal variations in water vapor over Central and South America

NASA Astrophysics Data System (ADS)

Meza, Amalia; Mendoza, Luciano; Clara, Bianchi

2017-04-01

Diurnal variations in atmospheric integrated water vapor (IWV) are studied employing IWV estimates, with a 30 minutes sampling rate, derived from Global Navigation Satellite Systems (GNSS) observations during the period 2007-2013. The analysis was performed in 70 GNSS tracking sites (GPS + GLONASS) belonging to Central and South America, which have more than 5 years of data. The selected area involves different climate types, from polar to tropical, and diverse relieves, therefore the patterns of IWV diurnal variations are very different for each station. There are many processes that could induce diurnal variations in atmospheric water vapor (Dai et al, 1999 a,b), the most relevant causes are: surface evapotranspiration, atmospheric large-scale vertical motion, atmospheric low-level moisture convergence and precipitation and vertical mixing (which affects the vertical distribution of water vapor but does not affect the IWV). Firstly, our work study the main characteristics of the IWV diurnal cycle (and for surface temperature, T) obtained for all stations together, using Principal Component Analysis (PCA). First and second PCA modes highlight the global main behaviors of IWV variability for all stations. The first mode on IWV represent the 70% of the variability and could be related to the surface evapotranspiration, while the second mode (27 % of the variability) is practically in counter phase to T variability (its first mode represent the 97% of the variability), therefore this mode could be related to breeze regime. Then, every station is separately analyzed and seasonal and local variations (relative to the relives) are detected, these results spotlight, among other characteristics, the sea and mountain breeze regime. This presentation shows the first analysis of IWV diurnal cycle performed over Central and South America and another original characteristic is PCA technique employed to infer the results. Reference: Dai, A., K. E. Trenberth, and T. R. Karl, 1999 a: Effects of clouds, soil moisture, precipitation and water vapor on diurnal temperature range. J. Climate, 12, 2451-2473. Dai, A., F. Giorgi, and K. E. Trenberth, 1999 b: Observed and model simulated precipitation diurnal cycle over the contiguous United States.J. Geophys. Res., 104, 6377-6402.

On the influence of the diurnal variations of aerosol content to estimate direct aerosol radiative forcing using MODIS data

NASA Astrophysics Data System (ADS)

Xu, Hui; Guo, Jianping; Ceamanos, Xavier; Roujean, Jean-Louis; Min, Min; Carrer, Dominique

2016-09-01

Long-term measurements of aerosol optical depth (AOD) from the Aerosol Robotic Network (AERONET) located in Beijing reveal a strong diurnal cycle of aerosol load staged by seasonal patterns. Such pronounced variability is matter of importance in respect to the estimation of daily averaged direct aerosol radiative forcing (DARF). Polar-orbiting satellites could only offer a daily revisit, which turns in fact to be even much less in case of frequent cloudiness. Indeed, this places a severe limit to properly capture the diurnal variations of AOD and thus estimate daily DARF. Bearing this in mind, the objective of the present study is however to evaluate the impact of AOD diurnal variations for conducting quantitative assessment of DARF using Moderate Resolution Imaging Spectroradiometer (MODIS) AOD data over Beijing. We provide assessments of DARF with two different assumptions about diurnal AOD variability: taking the observed hourly-averaged AOD cycle into account and assuming constant MODIS (including Terra and Aqua) AOD value throughout the daytime. Due to the AOD diurnal variability, the absolute differences in annual daily mean DARFs, if the constant MODIS/Terra (MODIS/Aqua) AOD value is used instead of accounting for the observed hourly-averaged daily variability, is 1.2 (1.3) Wm-2 at the top of the atmosphere, 27.5 (30.6) Wm-2 at the surface, and 26.4 (29.3) Wm-2 in the atmosphere, respectively. During the summertime, the impact of the diurnal AOD variability on seasonal daily mean DARF estimates using MODIS Terra (Aqua) data can reach up to 2.2 (3.9) Wm-2 at the top of the atmosphere, 43.7 (72.7) Wm-2 at the surface, and 41.4 (68.8) Wm-2 in the atmosphere, respectively. Overall, the diurnal variation in AOD tends to cause large bias in the estimated DARF on both seasonal and annual scales. In summertime, the higher the surface albedo, the stronger impact on DARF at the top of the atmosphere caused by dust and biomass burning (continental) aerosol. This indicates that the impact on DARFs estimates is sensitive to assumptions of aerosol type and surface albedo.

Impact of chronobiology on neuropathic pain treatment.

PubMed

Gilron, Ian

2016-01-01

Inflammatory pain exhibits circadian rhythmicity. Recently, a distinct diurnal pattern has been described for peripheral neuropathic conditions. This diurnal variation has several implications: advancing understanding of chronobiology may facilitate identification of new and improved treatments; developing pain-contingent strategies that maximize treatment at times of the day associated with highest pain intensity may provide optimal pain relief as well as minimize treatment-related adverse effects (e.g., daytime cognitive dysfunction); and consideration of the impact of chronobiology on pain measurement may lead to improvements in analgesic study design that will maximize assay sensitivity of clinical trials. Recent and ongoing chronobiology studies are thus expected to advance knowledge and treatment of neuropathic pain.

Differential contribution of Ca2+ sources to day and night BK current activation in the circadian clock

PubMed Central

McNally, Beth A.

2018-01-01

Large conductance K+ (BK) channels are expressed widely in neurons, where their activation is regulated by membrane depolarization and intracellular Ca2+ (Ca2+i). To enable this regulation, BK channels functionally couple to both voltage-gated Ca2+ channels (VGCCs) and channels mediating Ca2+ release from intracellular stores. However, the relationship between BK channels and their specific Ca2+ source for particular patterns of excitability is not well understood. In neurons within the suprachiasmatic nucleus (SCN)—the brain’s circadian clock—BK current, VGCC current, and Ca2+i are diurnally regulated, but paradoxically, BK current is greatest at night when VGCC current and Ca2+i are reduced. Here, to determine whether diurnal regulation of Ca2+ is relevant for BK channel activation, we combine pharmacology with day and night patch-clamp recordings in acute slices of SCN. We find that activation of BK current depends primarily on three types of channels but that the relative contribution changes between day and night. BK current can be abrogated with nimodipine during the day but not at night, establishing that L-type Ca2+ channels (LTCCs) are the primary daytime Ca2+ source for BK activation. In contrast, dantrolene causes a significant decrease in BK current at night, suggesting that nighttime BK activation is driven by ryanodine receptor (RyR)–mediated Ca2+i release. The N- and P/Q-type Ca2+ channel blocker ω-conotoxin MVIIC causes a smaller reduction of BK current that does not differ between day and night. Finally, inhibition of LTCCs, but not RyRs, eliminates BK inactivation, but the BK β2 subunit was not required for activation of BK current by LTCCs. These data reveal a dynamic coupling strategy between BK channels and their Ca2+ sources in the SCN, contributing to diurnal regulation of SCN excitability. PMID:29237755

Differential contribution of Ca2+ sources to day and night BK current activation in the circadian clock.

PubMed

Whitt, Joshua P; McNally, Beth A; Meredith, Andrea L

2018-02-05

Large conductance K + (BK) channels are expressed widely in neurons, where their activation is regulated by membrane depolarization and intracellular Ca 2+ (Ca 2+ i ). To enable this regulation, BK channels functionally couple to both voltage-gated Ca 2+ channels (VGCCs) and channels mediating Ca 2+ release from intracellular stores. However, the relationship between BK channels and their specific Ca 2+ source for particular patterns of excitability is not well understood. In neurons within the suprachiasmatic nucleus (SCN)-the brain's circadian clock-BK current, VGCC current, and Ca 2+ i are diurnally regulated, but paradoxically, BK current is greatest at night when VGCC current and Ca 2+ i are reduced. Here, to determine whether diurnal regulation of Ca 2+ is relevant for BK channel activation, we combine pharmacology with day and night patch-clamp recordings in acute slices of SCN. We find that activation of BK current depends primarily on three types of channels but that the relative contribution changes between day and night. BK current can be abrogated with nimodipine during the day but not at night, establishing that L-type Ca 2+ channels (LTCCs) are the primary daytime Ca 2+ source for BK activation. In contrast, dantrolene causes a significant decrease in BK current at night, suggesting that nighttime BK activation is driven by ryanodine receptor (RyR)-mediated Ca 2+ i release. The N- and P/Q-type Ca 2+ channel blocker ω-conotoxin MVIIC causes a smaller reduction of BK current that does not differ between day and night. Finally, inhibition of LTCCs, but not RyRs, eliminates BK inactivation, but the BK β2 subunit was not required for activation of BK current by LTCCs. These data reveal a dynamic coupling strategy between BK channels and their Ca 2+ sources in the SCN, contributing to diurnal regulation of SCN excitability. © 2018 Whitt et al.

Setting the main circadian clock of a diurnal mammal by hypocaloric feeding

PubMed Central

Mendoza, Jorge; Gourmelen, Sylviane; Dumont, Stephanie; Sage-Ciocca, Dominique; Pévet, Paul; Challet, Etienne

2012-01-01

Caloric restriction attenuates the onset of a number of pathologies related to ageing. In mammals, circadian rhythms, controlled by the hypothalamic suprachiasmatic (SCN) clock, are altered with ageing. Although light is the main synchronizer for the clock, a daily hypocaloric feeding (HF) may also modulate the SCN activity in nocturnal rodents. Here we report that a HF also affects behavioural, physiological and molecular circadian rhythms of the diurnal rodent Arvicanthis ansorgei. Under constant darkness HF, but not normocaloric feeding (NF), entrains circadian behaviour. Under a light–dark cycle, HF at midnight led to phase delays of the rhythms of locomotor activity and plasma corticosterone. Furthermore, Per2 and vasopressin gene oscillations in the SCN were phase delayed in HF Arvicanthis compared with animals fed ad libitum. Moreover, light-induced expression of Per genes in the SCN was modified in HF Arvicanthis, despite a non-significant effect on light-induced behavioural phase delays. Together, our data show that HF affects the circadian system of the diurnal rodent Arvicanthis ansorgei differentially from nocturnal rodents. The Arvicanthis model has relevance for the potential use of HF to manipulate circadian rhythms in diurnal species including humans. PMID:22570380

Long-term real-time chemical characterization of submicron aerosols at Montsec (Southern Pyrenees, 1570 m a.s.l.)

NASA Astrophysics Data System (ADS)

Ripoll, A.; Minguillón, M. C.; Pey, J.; Jimenez, J. L.; Day, D. A.; Querol, X.; Alastuey, A.

2014-11-01

Real-time measurements of inorganic (sulfate, nitrate, ammonium, chloride and black carbon (BC)) and organic submicron aerosols from a continental background site (Montsec, MSC, 1570 m a.s.l.) in the Western Mediterranean Basin (WMB) were conducted for 10 months (July 2011-April 2012). An Aerosol Chemical Speciation Monitor (ACSM) was co-located with other on-line and off-line PM1 measurements. Analyses of the hourly, diurnal, and seasonal variations are presented here, for the first time for this region. Seasonal trends in PM1 components are attributed to variations in: evolution of the planetary boundary layer (PBL) height, air mass origin, and meteorological conditions. In summer, the higher temperature and solar radiation increases convection, enhancing the growth of the PBL and the transport of anthropogenic pollutants towards high altitude sites. Furthermore, the regional recirculation of air masses over the WMB creates a continuous increase in the background concentrations of PM1 components and causes the formation of reserve strata at relatively high altitudes. Sporadically, MSC is affected by air masses from North Africa. The combination of all these atmospheric processes at local, regional and continental scales results in a high variability of PM1 components, with poorly defined daily patterns, except for the organic aerosols (OA). OA was mostly oxygenated organic aerosol (OOA), with two different types: semi-volatile (SV-OOA) and low-volatile (LV-OOA), and both showed marked diurnal cycles regardless of the air mass origin, especially SV-OOA. This different diurnal variation compared to inorganic aerosols suggested that OA components at MSC are not only associated with anthropogenic and long-range-transported secondary OA (SOA), but also with recently-produced biogenic SOA. Very different conditions drive the aerosol phenomenology in winter at MSC. The thermal inversions and the lower vertical development of the PBL leave MSC in the free troposphere most of the day, being affected by PBL air masses only after midday, when the mountain breezes transport emissions from the adjacent valleys and plains to the top of the mountain. This results in clear diurnal patterns of both organic and inorganic concentrations. Moreover, in winter sporadic long-range transport from mainland Europe is observed and leads to less marked diurnal patterns. The results obtained in the present study highlight the importance of SOA formation processes at a remote site such as MSC, especially in summer. Additional research is needed to characterize the sources of SOA at remote sites.

Water-stress-induced breakdown of carbon-water relations: indicators from diurnal FLUXNET patterns

NASA Astrophysics Data System (ADS)

Nelson, Jacob A.; Carvalhais, Nuno; Migliavacca, Mirco; Reichstein, Markus; Jung, Martin

2018-04-01

Understanding of terrestrial carbon and water cycles is currently hampered by an uncertainty in how to capture the large variety of plant responses to drought. In FLUXNET, the global network of CO2 and H2O flux observations, many sites do not uniformly report the ancillary variables needed to study drought response physiology. To this end, we outline two data-driven indicators based on diurnal energy, water, and carbon flux patterns derived directly from the eddy covariance data and based on theorized physiological responses to hydraulic and non-stomatal limitations. Hydraulic limitations (i.e. intra-plant limitations on water movement) are proxied using the relative diurnal centroid (CET*), which measures the degree to which the flux of evapotranspiration (ET) is shifted toward the morning. Non-stomatal limitations (e.g. inhibitions of biochemical reactions, RuBisCO activity, and/or mesophyll conductance) are characterized by the Diurnal Water-Carbon Index (DWCI), which measures the degree of coupling between ET and gross primary productivity (GPP) within each day. As a proof of concept we show the response of the metrics at six European sites during the 2003 heat wave event, showing a varied response of morning shifts and decoupling. Globally, we found indications of hydraulic limitations in the form of significantly high frequencies of morning-shifted days in dry/Mediterranean climates and savanna/evergreen plant functional types (PFTs), whereas high frequencies of decoupling were dominated by dry climates and grassland/savanna PFTs indicating a prevalence of non-stomatal limitations in these ecosystems. Overall, both the diurnal centroid and DWCI were associated with high net radiation and low latent energy typical of drought. Using three water use efficiency (WUE) models, we found the mean differences between expected and observed WUE to be -0.09 to 0.44 µmol mmol-1 and -0.29 to -0.40 µmol mmol-1 for decoupled and morning-shifted days, respectively, compared to mean differences -1.41 to -1.42 µmol mmol-1 in dry conditions, suggesting that morning shifts/hydraulic responses are associated with an increase in WUE, whereas decoupling/non-stomatal limitations are not.

Regulation of melanopsin expression.

PubMed

Hannibal, Jens

2006-01-01

Circadian rhythms in mammals are adjusted daily to the environmental day/night cycle by photic input via the retinohypothalamic tract (RHT). Retinal ganglion cells (RGCs) of the RHT constitute a separate light-detecting system in the mammalian retina used for irradiance detection and for transmission to the circadian system and other non-imaging forming processes in the brain. The RGCs of the RHT are intrinsically photosensitive due to the expression of melanopsin, an opsin-like photopigment. This notion is based on anatomical and functional data and on studies of mice lacking melanopsin. Furthermore, heterologous expression of melanopsin in non-neuronal mammalian cell lines was found sufficient to render these cells photosensitive. Even though solid evidence regarding the function of melanopsin exists, little is known about the regulation of melanopsin gene expression. Studies in albino Wistar rats showed that the expression of melanopsin is diurnal at both the mRNA and protein levels. The diurnal changes in melanopsin expression seem, however, to be overridden by prolonged exposure to light or darkness. Significant increase in melanopsin expression was observed from the first day in constant darkness and the expression continued to increase during prolonged exposure in constant darkness. Prolonged exposure to constant light, on the other hand, decreased melanopsin expression to an almost undetectable level after 5 days of constant light. The induction of melanopsin by darkness was even more pronounced if darkness was preceded by light suppression for 5 days. These observations show that dual mechanisms regulate melanopsin gene expression and that the intrinsic light-responsive RGCs in the albino Wistar rat adapt their expression of melanopsin to environmental light and darkness.

Idealized Numerical Modeling Experiments of the Diurnal Cycle of Tropical Cyclones

NASA Astrophysics Data System (ADS)

Navarro, Erika L.

Numerical experiments are performed to evaluate the role of the daily cycle of radiation on axisymmetric hurricane structure. Although a diurnal response in the high cloudiness of tropical cyclones (TCs) has been well documented in the past, the impact to storm structure and intensity remains unknown. Previous modeling work attributes differences in results to experimental setup (e.g., initial and boundary conditions) as well as to radiative parameterization schemes. Here, a numerically-simulated TC in a statistical steady-state is examined to quantify the TC response to the daily cycle of radiation, and a modified, Sawyer-Eliassen approach is applied to evaluate the dynamical mechanism. Fourier analysis in time reveals a spatially coherent pattern in the temperature, wind, and latent heating tendency fields that is statistically significant at the 95% level. This signal accounts for up to 62% of the variance in the temperature field of the upper troposphere, and is mainly concentrated in the TC outflow layer. Composite analysis reveals a cycle in the storm intensity in the low-levels, which lags a periodic response in the latent heating tendency by 6 h. Average magnitudes of the azimuthal wind anomalies near the radius of maximum wind (RMW) are 1 m/s and account for 21% of the overall variance. A hypothesis is drawn from these results that the TC diurnal cycle is comprised of two distinct, periodic circulations: (1) a radiatively-driven circulation in the TC outflow layer due to absorption of solar radiation, and (2) a convectively-driven circulation in the lower and middle troposphere due to anomalous latent heating from convection. These responses are coupled and are periodic with respect to the diurnal cycle. Using a modified, Sawyer-Eliassen approach for time-varying heating, these hypotheses are evaluated to determine the impact of periodic diurnal heating on a balanced vortex. Periodic heating near the top of the vortex produces a local overturning circulation in the region of heating that manifests as inertia-buoyancy waves in the storm environment. Periodic heating in the lower troposphere drives an overturning circulation that resembles the Sawyer-Eliassen solution. This low-level heating induces a positive perturbation azimuthal wind response of 4 m/s near the RMW, which lags the maximum in streamfunction by 6 h. Comparison of these solutions to the numerically-simulated TC reveals a close correspondence of results, suggesting that the axisymmetric TC diurnal cycle is a balanced response driven by periodic heating. The sensitivity of these results to the length of the diurnal period and the vortex intensity are evaluated using the modified, Sawyer-Eliassen approach. Although the true diurnal period is fixed in nature, these experiments allow for the relationship between the magnitude and structure of the TC diurnal signal to the length of the diurnal period to be explored. Results demonstrate that the TC diurnal cycle exhibits large variance, even for the same heating distributions. High-frequency forcing projects mainly onto inertia-buoyancy waves, while low-frequency produces a balanced response resembling the Sawyer-Eliassen solution. Comparison to two, numerically simulated TCs with modified diurnal periods show similar results. In addition, stronger diurnal signals are observed for stronger vortices, suggesting a dependence of the TC diurnal signal on the underlying state of the vortex. These results imply that the magnitude and structure of the TC diurnal signal in nature varies throughout the storm lifetime, and is a function of the structure and intensity of the vortex.

Opsin co-expression in Limulus photoreceptors: differential regulation by light and a circadian clock

PubMed Central

Katti, C.; Kempler, K.; Porter, M. L.; Legg, A.; Gonzalez, R.; Garcia-Rivera, E.; Dugger, D.; Battelle, B.-A.

2010-01-01

A long-standing concept in vision science has held that a single photoreceptor expresses a single type of opsin, the protein component of visual pigment. However, the number of examples in the literature of photoreceptors from vertebrates and invertebrates that break this rule is increasing. Here, we describe a newly discovered Limulus opsin, Limulus opsin5, which is significantly different from previously characterized Limulus opsins, opsins1 and 2. We show that opsin5 is co-expressed with opsins1 and 2 in Limulus lateral and ventral eye photoreceptors and provide the first evidence that the expression of co-expressed opsins can be differentially regulated. We show that the relative levels of opsin5 and opsin1 and 2 in the rhabdom change with a diurnal rhythm and that their relative levels are also influenced by the animal's central circadian clock. An analysis of the sequence of opsin5 suggests it is sensitive to visible light (400–700 nm) but that its spectral properties may be different from that of opsins1 and 2. Changes in the relative levels of these opsins may underlie some of the dramatic day–night changes in Limulus photoreceptor function and may produce a diurnal change in their spectral sensitivity. PMID:20639420

Circadian consequences of social organization in the ant species Camponotus compressus

NASA Astrophysics Data System (ADS)

Sharma, Vijay Kumar; Lone, Shahnaz Rahman; Goel, Anubhuthi; Chandrashekaran, M. K.

The locomotor activity rhythm of different castes of the ant species Camponotus compressus was monitored individually under laboratory light/dark (LD) cycles, and under continuous darkness (DD). The colony of this ant species comprises two sexual castes, the queens and the males, and three worker castes, namely the major, media, and minor workers. The virgin males and virgin queens display rhythmic activity patterns, but the mated queens were arrhythmic while laying eggs, with the rhythmicity resuming soon after egg-laying. Under the LD regime, major workers showed nocturnal patterns, while about 75% of the media workers displayed nocturnal patterns and about 25% showed diurnal patterns. Under the DD regime, most major workers exhibited circadian rhythm of activity with a single steady state, whereas media workers displayed two types of activity patterns, with activity patterns changing after 6-9 days in DD (turn-arounds). The pre-turn-around τ of the ants that showed nocturnal activity patterns during LD entrainment was <24 h after release into DD, which then became >24 h, after 6-9 days. On the other hand, the pre-turn-around τ of those ants that exhibited diurnal patterns during LD entrainment was first >24 h after release into DD, and then became <24 h, after 6-9 days. The activity of the minor workers neither entrained to LD cycles nor showed any sign of free-run in DD. It appears that the circadian clocks of the ant species C. compressus are flexible, and may perhaps depend upon the tasks assigned to them in the colony.

Evaluation of CLM4 Solar Radiation Partitioning Scheme Using Remote Sensing and Site Level FPAR Datasets

DOE PAGES

Wang, Kai; Mao, Jiafu; Dickinson, Robert; ...

2013-06-05

This paper examines a land surface solar radiation partitioning scheme, i.e., that of the Community Land Model version 4 (CLM4) with coupled carbon and nitrogen cycles. Taking advantage of a unique 30-year fraction of absorbed photosynthetically active radiation (FPAR) dataset derived from the Global Inventory Modeling and Mapping Studies (GIMMS) normalized difference vegetation index (NDVI) data set, multiple other remote sensing datasets, and site level observations, we evaluated the CLM4 FPAR ’s seasonal cycle, diurnal cycle, long-term trends and spatial patterns. These findings show that the model generally agrees with observations in the seasonal cycle, long-term trends, and spatial patterns,more » but does not reproduce the diurnal cycle. Discrepancies also exist in seasonality magnitudes, peak value months, and spatial heterogeneity. Here, we identify the discrepancy in the diurnal cycle as, due to, the absence of dependence on sun angle in the model. Implementation of sun angle dependence in a one-dimensional (1-D) model is proposed. The need for better relating of vegetation to climate in the model, indicated by long-term trends, is also noted. Evaluation of the CLM4 land surface solar radiation partitioning scheme using remote sensing and site level FPAR datasets provides targets for future development in its representation of this naturally complicated process.« less

Temporal variability of selected air toxics in the United States

NASA Astrophysics Data System (ADS)

McCarthy, Michael C.; Hafner, Hilary R.; Chinkin, Lyle R.; Charrier, Jessica G.

Ambient measurements of hazardous air pollutants (HAPs, air toxics) collected in the United States from 1990 to 2005 were analyzed for diurnal, seasonal, and/or annual variability and trends. Visual and statistical analyses were used to identify and quantify temporal variations in air toxics at national and regional levels. Sufficient data were available to analyze diurnal variability for 14 air toxics, seasonal variability for 24 air toxics, and annual trends for 26 air toxics. Four diurnal variation patterns were identified and labeled invariant, nighttime peak, morning peak, and daytime peak. Three distinct seasonal patterns were identified and labeled invariant, cool, and warm. Multiple air toxics showed consistent decreasing trends over three trend periods, 1990-2005, 1995-2005, and 2000-2005. Trends appeared to be relatively consistent within chemically similar pollutant groups. Hydrocarbons such as benzene, 1,3-butadiene, styrene, xylene, and toluene decreased by approximately 5% or more per year at more than half of all monitoring sites. Concentrations of carbonyl compounds such as formaldehyde, acetaldehyde, and propionaldehyde were equally likely to have increased or decreased at monitoring sites. Chlorinated volatile organic compounds (VOCs) such as tetrachloroethylene, dichloromethane, and methyl chloroform decreased at more than half of all monitoring sites, but decreases among these species were much more variable than among the hydrocarbons. Lead particles decreased in concentration at most monitoring sites, but trends in other metals were not consistent over time.

Biodiversity and diel variation of the benthohyponeuston: A case study of the Northeast Black Sea

NASA Astrophysics Data System (ADS)

Vereshchaka, Alexander L.; Anokhina, Ludmila L.

2015-12-01

The neustal is a specific habitat of oceans, which significantly differs in abiotic parameters from the waters below. One of the most significant components of the coastal neustonic fauna is the benthohyponeuston migrating diurnally between benthic and neustonic realms. Data on this fauna are fragmentary and contradictory, partly due to lack of the criteria to distinguish benthohyponeuston from other benthopelagic animals diurnally migrating to the bulk water from the seafloor. We propose a criterion to quantify the degree of aggregation/avoidance of the neustal zone, reveal four distinct ecological groups and describe patterns of their overnight dynamics. Benthohyponeuston appears in open water at sunset, its biomass most rapidly increases one hour after sunset. Cumaceans, mysids and polychaetes make significant contribution during first three hours after sunset. Decapods are important around midnight and 3 h later. Amphipods are significant overnight. By analogy with the benthopelagic species, we define the benthohyponeuston as benthic animals, which are associated with the neustal zone at least at one stage of their life cycle. This association is necessary for reproduction, dispersal or feeding - that represent three basic pathways connecting neustonic and benthic/benthopelagic coastal communities below. The data on benthohyponeuston and patterns of its overnight dynamics will help in a better understanding of vertical migrations in the coastal zone and in estimating diurnal fluxes of organic matter.

The trehalose pathway in maize: conservation and gene regulation in response to the diurnal cycle and extended darkness

PubMed Central

Henry, Clémence; Bledsoe, Samuel W.; Siekman, Allison; Kollman, Alec; Waters, Brian M.; Feil, Regina; Stitt, Mark; Lagrimini, L. Mark

2014-01-01

Energy resources in plants are managed in continuously changing environments, such as changes occurring during the day/night cycle. Shading is an environmental disruption that decreases photosynthesis, compromises energy status, and impacts on crop productivity. The trehalose pathway plays a central but not well-defined role in maintaining energy balance. Here, we characterized the maize trehalose pathway genes and deciphered the impacts of the diurnal cycle and disruption of the day/night cycle on trehalose pathway gene expression and sugar metabolism. The maize genome encodes 14 trehalose-6-phosphate synthase (TPS) genes, 11 trehalose-6-phosphate phosphatase (TPP) genes, and one trehalase gene. Transcript abundance of most of these genes was impacted by the day/night cycle and extended dark stress, as were sucrose, hexose sugars, starch, and trehalose-6-phosphate (T6P) levels. After extended darkness, T6P levels inversely followed class II TPS and sucrose non-fermenting-related protein kinase 1 (SnRK1) target gene expression. Most significantly, T6P no longer tracked sucrose levels after extended darkness. These results showed: (i) conservation of the trehalose pathway in maize; (ii) that sucrose, hexose, starch, T6P, and TPS/TPP transcripts respond to the diurnal cycle; and(iii) that extended darkness disrupts the correlation between T6P and sucrose/hexose pools and affects SnRK1 target gene expression. A model for the role of the trehalose pathway in sensing of sucrose and energy status in maize seedlings is proposed. PMID:25271261

Menopausal hot flashes: Randomness or rhythmicity

NASA Astrophysics Data System (ADS)

Kronenberg, Fredi

1991-10-01

Menopausal hot flashes are episodes of flushing, increased heart rate, skin blood flow and skin temperature, and a sensation of heat. The thermoregulatory and cardiovascular concomitants of hot flashes are associated with peaks in the levels of various hormones and neurotransmitters in the peripheral circulation. Although hot flashes affect about 75% of women, and are the primary reason that women at menopause seek medical attention, the mechanism of hot flashes is still not understood. Hot flashes vary in frequency and intensity both within and between individuals, and have been thought of as occurring randomly. Yet, some women report that their hot flashes are worse at a particular time of day or year. Initial examination of subjects' recordings of their hot flashes showed diurnal patterns of hot flash occurrence. There also seems to be a diurnal rhythm of hot flash intensity. Continuous physiological monitoring of hot flashes is facilitating the analysis of these patterns, which is revealing circadian and ultradian periodicities. The occurrence of hot flashes can be modulated by external and internal factors, including ambient temperature and fever. Rhythms of thermoregulatory and endocrine functions also may influence hot flash patterns. Examination of the interrelationships between the various systems of the body involved in hot flashes, and a multidisciplinary approach to the analysis of hot flash patterns, will aid our understanding of this complex phenomenon.

A methodology for investigation of the seasonal evolution in proglacial hydrograph form

NASA Astrophysics Data System (ADS)

Hannah, David M.; Gurnell, Angela M.; McGregor, Glenn R.

1999-11-01

This paper advances an objective method of diurnal hydrograph classification as an aid to exploring changes in the hydrological functioning of glacierized catchments over the ablation season. The temporal sequencing of different hydrograph classes allows identification of seasonal evolution in hydrograph form and also assists delimitation of hydrologically-meaningful time periods of similar diurnal discharge response. The effectiveness of this approach is illustrated by applying it to two contrasting summer discharge records for a small cirque basin. By comparing the results with patterns of surface energy receipt and glacier ablation, the seasonally transient relative influences of: (i) surface meltwater production and (ii) meltwater routing and storage conditions within the intervening glacier drainage system in determining runoff are elucidated. The method successfully characterizes distinct seasonal-scale changes in the diurnal outflow hydrograph during the ablation-dominated 1995 melt season but is also able to reveal underlying trends and short-term fluctuations in the precipitation-dominated, poorly ablation-regulated 1996 melt season. The limitations and benefits of this hydrograph classification technique are evaluated.

Rising sea levels will reduce extreme temperature variations in tide-dominated reef habitats

PubMed Central

Lowe, Ryan Joseph; Pivan, Xavier; Falter, James; Symonds, Graham; Gruber, Renee

2016-01-01

Temperatures within shallow reefs often differ substantially from those in the surrounding ocean; therefore, predicting future patterns of thermal stresses and bleaching at the scale of reefs depends on accurately predicting reef heat budgets. We present a new framework for quantifying how tidal and solar heating cycles interact with reef morphology to control diurnal temperature extremes within shallow, tidally forced reefs. Using data from northwestern Australia, we construct a heat budget model to investigate how frequency differences between the dominant lunar semidiurnal tide and diurnal solar cycle drive ~15-day modulations in diurnal temperature extremes. The model is extended to show how reefs with tidal amplitudes comparable to their depth, relative to mean sea level, tend to experience the largest temperature extremes globally. As a consequence, we reveal how even a modest sea level rise can substantially reduce temperature extremes within tide-dominated reefs, thereby partially offsetting the local effects of future ocean warming. PMID:27540589

Link between light-triggered Mg-banding and chamber formation in the planktic foraminifera Neogloboquadrina dutertrei

NASA Astrophysics Data System (ADS)

Fehrenbacher, Jennifer S.; Russell, Ann D.; Davis, Catherine V.; Gagnon, Alexander C.; Spero, Howard J.; Cliff, John B.; Zhu, Zihua; Martin, Pamela

2017-05-01

The relationship between seawater temperature and the average Mg/Ca ratios in planktic foraminifera is well established, providing an essential tool for reconstructing past ocean temperatures. However, many species display alternating high and low Mg-bands within their shell walls that cannot be explained by temperature alone. Recent experiments demonstrate that intrashell Mg variability in Orbulina universa, which forms a spherical terminal shell, is paced by the diurnal light/dark cycle. Whether Mg-heterogeneity is also diurnally paced in species with more complex shell morphologies is unknown. Here we show that high Mg/Ca-calcite forms at night in cultured specimens of the multi-chambered species Neogloboquadrina dutertrei. Our results demonstrate that N. dutertrei adds a significant amount of calcite, and nearly all Mg-bands, after the final chamber forms. These results have implications for interpreting patterns of calcification in N. dutertrei and suggest that diurnal Mg-banding is an intrinsic component of biomineralization in planktic foraminifera.

Transcriptome-Wide Identification of Reference Genes for Expression Analysis of Soybean Responses to Drought Stress along the Day.

PubMed

Marcolino-Gomes, Juliana; Rodrigues, Fabiana Aparecida; Fuganti-Pagliarini, Renata; Nakayama, Thiago Jonas; Ribeiro Reis, Rafaela; Bouças Farias, Jose Renato; Harmon, Frank G; Correa Molinari, Hugo Bruno; Correa Molinari, Mayla Daiane; Nepomuceno, Alexandre

2015-01-01

The soybean transcriptome displays strong variation along the day in optimal growth conditions and also in response to adverse circumstances, like drought stress. However, no study conducted to date has presented suitable reference genes, with stable expression along the day, for relative gene expression quantification in combined studies on drought stress and diurnal oscillations. Recently, water deficit responses have been associated with circadian clock oscillations at the transcription level, revealing the existence of hitherto unknown processes and increasing the demand for studies on plant responses to drought stress and its oscillation during the day. We performed data mining from a transcriptome-wide background using microarrays and RNA-seq databases to select an unpublished set of candidate reference genes, specifically chosen for the normalization of gene expression in studies on soybean under both drought stress and diurnal oscillations. Experimental validation and stability analysis in soybean plants submitted to drought stress and sampled during a 24 h timecourse showed that four of these newer reference genes (FYVE, NUDIX, Golgin-84 and CYST) indeed exhibited greater expression stability than the conventionally used housekeeping genes (ELF1-β and β-actin) under these conditions. We also demonstrated the effect of using reference candidate genes with different stability values to normalize the relative expression data from a drought-inducible soybean gene (DREB5) evaluated in different periods of the day.

Hourly pattern of allergenic alder and birch pollen concentrations in the air: Spatial differentiation and the effect of meteorological conditions

NASA Astrophysics Data System (ADS)

Borycka, K.; Kasprzyk, I.

2018-06-01

In temperate climate widespread alder and birch are an important source of strong aeroallergens. The diurnal pattern of airborne pollen concentrations depends on the rhythm of pollen release from anthers as well as weather conditions, convection air currents, long-distance transport, pollen trap location and local vegetation. The aim of the study was to present a diurnal pattern of Alnus (alder) and Betula (birch) pollen concentrations in the air in a horizontal and vertical gradient and examine the weather parameters that had the greatest impact on the pattern. The study was conducted in Rzeszów City, southeast Poland over three years. Pollen grains were collected using a Hirst volumetric spore trap at three sampling points: two at 12 m the agl, and one at 1.5 m agl. Data were analysed using circular statistics and a nonlinear function. For alder, three models of hourly patterns were elaborated and the most common presented early morning minimum and early afternoon maximum. For birch, the most common model has one peak at night and a marked decrease in concentrations in early morning, although a second model has peak during early afternoon. A model with 3 peaks is much less common. These models are characteristic for warm temperate climate regions, where alders and birches are common. The diurnal patterns did not depend on the localization of traps or proximity of the pollen source, although these factors influenced the hourly concentrations, with higher values observed at roof level. Significant relationships between the hourly pollen counts and meteorological parameters were observed only for alder. Three incidents of increasing birch pollen concentrations were observed during the first two hours of precipitation and linked to a convection effect. Unstable weather conditions caused by air convection might strongly modify the circadian pattern and cause the nightly peaks concentrations. The general results are that people suffering from allergies may be exposed to high birch and alder pollen concentrations at almost all times during the day with the exception of the morning hours, as well as during the first hours of convective precipitation. Precise information on pollen concentrations aids in allergy prevention, so cities should provide aerobiological monitoring at least at "roof level" and "nose level".

Ecological Momentary Assessment of Pain, Fatigue, Depressive, and Cognitive Symptoms Reveals Significant Daily Variability in Multiple Sclerosis.

PubMed

Kratz, Anna L; Murphy, Susan L; Braley, Tiffany J

2017-11-01

To describe the daily variability and patterns of pain, fatigue, depressed mood, and cognitive function in persons with multiple sclerosis (MS). Repeated-measures observational study of 7 consecutive days of home monitoring, including ecological momentary assessment (EMA) of symptoms. Multilevel mixed models were used to analyze data. General community. Ambulatory adults (N=107) with MS recruited through the University of Michigan and surrounding community. Not applicable. EMA measures of pain, fatigue, depressed mood, and cognitive function rated on a 0 to 10 scale, collected 5 times a day for 7 days. Cognitive function and depressed mood exhibited more stable within-person patterns than pain and fatigue, which varied considerably within person. All symptoms increased in intensity across the day (all P<.02), with fatigue showing the most substantial increase. Notably, this diurnal increase varied by sex and age; women showed a continuous increase from wake to bedtime, whereas fatigue plateaued after 7 pm for men (wake-bed B=1.04, P=.004). For the oldest subgroup, diurnal increases were concentrated to the middle of the day compared with younger subgroups, which showed an earlier onset of fatigue increase and sustained increases until bed time (wake-3 pm B=.04, P=.01; wake-7 pm B=.03, P=.02). Diurnal patterns of cognitive function varied by education; those with advanced college degrees showed a more stable pattern across the day, with significant differences compared with those with bachelor-level degrees in the evening (wake-7 pm B=-.47, P=.02; wake-bed B=-.45, P=.04). Findings suggest that chronic symptoms in MS are not static, even over a short time frame; rather, symptoms-fatigue and pain in particular-vary dynamically across and within days. Incorporation of EMA methods should be considered in the assessment of these chronic MS symptoms to enhance assessment and treatment strategies. Copyright © 2017 American Congress of Rehabilitation Medicine. Published by Elsevier Inc. All rights reserved.

Plasticity of circadian activity and body temperature rhythms in golden spiny mice.

PubMed

Cohen, Rotem; Smale, Laura; Kronfeld-Schor, Noga

2009-04-01

Most animals can be categorized as nocturnal, diurnal, or crepuscular. However, rhythms can be quite plastic in some species and vary from one individual to another within a species. In the golden spiny mouse (Acomys russatus), a variety of rhythm patterns have been seen, and these patterns can change considerably as animals are transferred from the field into the laboratory. We previously suggested that these animals may have a circadian time-keeping system that is fundamentally nocturnal and that diurnal patterns seen in their natural habitat reflect mechanisms operating outside of the basic circadian time-keeping system (i.e., masking). In the current study, we further characterized plasticity evident in the daily rhythms of golden spiny mice by measuring effects of lighting conditions and access to a running wheel on rhythms in general activity (GA) and body temperature (Tb). Before the wheel was introduced, most animals were active mainly during the night, though there was considerable inter-individual variability and patterns were quite plastic. The introduction of the wheel caused an increase in the level of nighttime activity and Tb in most individuals. The periods of the rhythms in constant darkness (DD) were very similar, and even slightly longer in this study (24.1+/-0.2 h) than in an earlier one in which animals had not been provided with running wheels. We found no correlation between the distance animals ran in their wheels and the period of their rhythms in DD. Re-entrainment after phase delays of the LD cycle occurred more rapidly in the presence than absence of the running wheel. The characteristics of the rhythms of golden spiny mice seen in this study may be the product of natural selection favoring plasticity of the circadian system, perhaps reflecting what can happen during an evolutionary transition as animals move from a nocturnal to a diurnal niche.

Global satellite data highlights the diurnal asymmetry of the surface temperature response to deforestation

NASA Astrophysics Data System (ADS)

Schultz, Natalie M.; Lawrence, Peter J.; Lee, Xuhui

2017-04-01

Uncertainties remain about the spatial pattern and magnitude of the biophysical effects of deforestation. In particular, a diurnal asymmetry in the magnitude and sign of the surface temperature response to deforestation (ΔTS) has been observed, but the biophysical processes that contribute to day and nighttime ΔTS are not fully understood. In this study, we use a space-for-time approach with satellite and reanalysis data to investigate the biophysical processes that control the day and nighttime ΔTS. Additionally, we incorporate flux-tower data to examine two hypotheses for nighttime forest warming relative to open lands: (1) that forests generate turbulence in the stable nocturnal boundary layer, which brings heat aloft down to the surface, and (2) that forests store more heat during the day and release it at night. Our results confirm a diurnal asymmetry in ΔTS. Over most regions of the world, deforestation results in daytime warming and nighttime cooling. The strongest daytime warming is in the tropics, where the average ΔTS is 4.4 ± 0.07 K. The strongest nighttime cooling is observed in the boreal zone, where open lands are cooler than forests by an average of 1.4 ± 0.04 K. Daytime patterns of ΔTS are explained by differences in the latent heat flux (ΔLE) and absorbed solar radiation (ΔKa). We find that nighttime ΔTS is related to the strength of the nocturnal temperature inversion, with stronger temperature inversions at high latitudes and weak inversions in the tropics. Forest turbulence at night combined with stored heat release drives nighttime ΔTS patterns.

Impaired Production and Diurnal Regulation of Vascular RvDn-3 DPA Increase Systemic Inflammation and Cardiovascular Disease.

PubMed

Colas, Romain A; Souza, Patricia R; Walker, Mary E; Burton, Maudrian; Zasłona, Zbigniew; Curtis, Annie M; Marques, Raquel M; Dalli, Jesmond

2018-03-16

Diurnal mechanisms are central to regulating host responses. Recent studies uncovered a novel family of mediators termed as specialized proresolving mediators that terminate inflammation without interfering with the immune response. Herein, we investigated the diurnal regulation of specialized proresolving mediators in humans and their role in controlling peripheral blood leukocyte and platelet activation. Using lipid mediator profiling and healthy volunteers, we found that plasma concentrations of n-3 docosapentaenoic acid-derived D-series resolvins (RvD n-3 DPA ) were regulated in a diurnal manner. The production and regulation of these mediators was markedly altered in patients at risk of myocardial infarct. These changes were associated with decreased 5-lipoxygenase expression and activity, as well as increased systemic adenosine concentrations. We also found a significant negative correlation between plasma RvD n-3 DPA and markers of platelet, monocyte, and neutrophil activation, including CD63 and CD11b. Incubation of RvD n-3 DPA with peripheral blood from healthy volunteers and patients with cardiovascular disease significantly and dose-dependently decreased platelet and leukocyte activation. Furthermore, administration of RvD5 n-3 DPA to ApoE -/- (apolipoprotein E deficient) mice significantly reduced platelet-leukocyte aggregates, vascular thromboxane B 2 concentrations, and aortic lesions. These results demonstrate that peripheral blood RvD n-3 DPA are diurnally regulated in humans, and dysregulation in the production of these mediators may lead to cardiovascular disease. © 2018 The Authors.

[Effects of diurnal warming on soil N2O emission in soybean field].

PubMed

Hu, Zheng-Hua; Zhou, Ying-Ping; Cui, Hai-Ling; Chen, Shu-Tao; Xiao, Qi-Tao; Liu, Yan

2013-08-01

To investigate the impact of experimental warming on N2O emission from soil of soybean field, outdoor experiments with simulating diurnal warming were conducted, and static dark chamber-gas chromatograph method was used to measure N2O emission fluxes. Results indicated that: the diurnal warming did not change the seasonal pattern of N2O emissions from soil. In the whole growing season, comparing to the control treatment (CK), the warming treatment (T) significantly enhanced the N2O flux and the cumulative amount of N2O by 17.31% (P = 0.019), and 20.27% (P = 0.005), respectively. The significant correlations were found between soil N2O emission and soil temperature, moisture. The temperature sensitivity values of soil N2O emission under CK and T treatments were 3.75 and 4.10, respectively. In whole growing stage, T treatment significantly increased the crop aboveground and total biomass, the nitrate reductase activity, and total nitrogen in leaves, while significantly decreased NO3(-) -N content in leaves. T treatment significantly increased soil NO3(-) -N content, but had no significant effect on soil organic carbon and total nitrogen contents. The results of this study suggested that diurnal warming enhanced N2O emission from soil in soybean field.

Starch-Branching Enzyme IIa Is Required for Proper Diurnal Cycling of Starch in Leaves of Maize1[OA

PubMed Central

Yandeau-Nelson, Marna D.; Laurens, Lieve; Shi, Zi; Xia, Huan; Smith, Alison M.; Guiltinan, Mark J.

2011-01-01

Starch-branching enzyme (SBE), a glucosyl transferase, is required for the highly regular pattern of α-1,6 bonds in the amylopectin component of starch. In the absence of SBEIIa, as shown previously in the sbe2a mutant of maize (Zea mays), leaf starch has drastically reduced branching and the leaves exhibit a severe senescence-like phenotype. Detailed characterization of the maize sbe2a mutant revealed that SBEIIa is the primary active branching enzyme in the leaf and that in its absence plant growth is affected. Both seedling and mature sbe2a mutant leaves do not properly degrade starch during the night, resulting in hyperaccumulation. In mature sbe2a leaves, starch hyperaccumulation is greatest in visibly senescing regions but also observed in green tissue and is correlated to a drastic reduction in photosynthesis within the leaf. Starch granules from sbe2a leaves observed via scanning electron microscopy and transmission electron microscopy analyses are larger, irregular, and amorphous as compared with the highly regular, discoid starch granules observed in wild-type leaves. This appears to trigger premature senescence, as shown by an increased expression of genes encoding proteins known to be involved in senescence and programmed cell death processes. Together, these results indicate that SBEIIa is required for the proper diurnal cycling of transitory starch within the leaf and suggest that SBEIIa is necessary in producing an amylopectin structure amenable to degradation by starch metabolism enzymes. PMID:21508184

Genetic diversity in the environmental conditioning of gossypium hirsutum and gossypium barbadense cultivars

USDA-ARS?s Scientific Manuscript database

Enzyme adaptations to temperature occur constantly as temperature patterns modulate diurnally and seasonally. These adaptations entail qualitative and/or quantitative metabolic changes that often provide a competitive advantage, impact migration to new environments, and effect the survival of the s...

Ecological analysis of spatial and temporal patterns of pelagic ecosystem components potentially interacting with an OTEC (Ocean Thermal Energy Conversion) plant near Punta Tuna, Puerto Rico: physical characteristics. Final report

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lopez, J.M.; Tilly, L.J.

1983-01-01

This hydrographic study characterizes the Punta Tuna area as a potential site for an OTEC power plant. Seven cruises were conducted at approximately two month intervals. Each cruise included at least 22 hydrocast stations, six done as serial stations in a small area to reveal temporal and small scale variability. The results of the analysis of these data so far indicate a bi-seasonality in the dynamics. Mesoscale eddies and meanders are a common feature of the circulation pattern on Puerto Rico's southern coast. The time series studies have shown their existence of a very energetic internal wave field with relativelymore » large amplitude waves at the diurnal and semi-diurnal tidal frequencies. The results in terms of an OTEC power plant indicate the thermal resource to be at least a 20C thermal gradient in the upper 100 m year round.« less

Model Simulation of Diurnal Vertical Migration Patterns of Different-Sized Colonies of Microcystis Employing a Particle Trajectory Approach.

PubMed

Chien, Yu Ching; Wu, Shian Chee; Chen, Wan Ching; Chou, Chih Chung

2013-04-01

Microcystis , a genus of potentially harmful cyanobacteria, is known to proliferate in stratified freshwaters due to its capability to change cell density and regulate buoyancy. In this study, a trajectory model was developed to simulate the cell density change and spatial distribution of Microcystis cells with nonuniform colony sizes. Simulations showed that larger colonies migrate to the near-surface water layer during the night to effectively capture irradiation and become heavy enough to sink during daytime. Smaller-sized colonies instead took a longer time to get to the surface. Simulation of the diurnally varying Microcystis population profile matched the observed pattern in the field when the radii of the multisized colonies were in a beta distribution. This modeling approach is able to take into account the history of cells by keeping track of their positions and properties, such as cell density and the sizes of colonies. It also serves as the basis for further developmental modeling of phytoplanktons that are forming colonies and changing buoyancy.

Carbon and energy fluxes from China's largest freshwater lake

NASA Astrophysics Data System (ADS)

Gan, G.; LIU, Y.

2017-12-01

Carbon and energy fluxes between lakes and the atmosphere are important aspects of hydrology, limnology, and ecology studies. China's largest freshwater lake, the Poyang lake experiences tremendous water-land transitions periodically throughout the year, which provides natural experimental settings for the study of carbon and energy fluxes. In this study, we use the eddy covariance technique to explore the seasonal and diurnal variation patterns of sensible and latent heat fluxes of Poyang lake during its high-water and low-water periods, when the lake is covered by water and mudflat, respectively. We also determine the annual NEE of Poyang lake and the variations of NEE's components: Gross Primary Productivity (GPP) and Ecosystem Respiration (Re). Controlling factors of seasonal and diurnal variations of carbon and energy fluxes are analyzed, and land cover impacts on the variation patterns are also studied. Finally, the coupling between the carbon and energy fluxes are analyzed under different atmospheric, boundary stability and land cover conditions.

Differences in the diurnal pattern of soil respiration under adjacent Miscanthus x giganteus and barley crops reveal potential flaws in accepted sampling strategies

NASA Astrophysics Data System (ADS)

Keane, James; Ineson, Phil

2017-04-01

Soil respiration (Rs) plays an important role in the global carbon cycle and contributes ca. 30% of global ecosystem respiration.However, for convenience, measurements used to compare Rs from different land uses, crops or management practices are often made between 09:00 and 16:00, with an implicit assumption that Rs is largely controlled by temperature. Three months' continuous data presented here show distinctly different diurnal patterns of Rs between barley (Hordeum vulgare) and Miscanthus x giganteus (Miscanthus) grown on adjacent fields. Maximum Rs in barley occurred during the afternoon and correlated with soil temperature, whereas Rs peaked in Miscanthus during the night and was significantly correlated with earlier levels of solar radiation, probably due to delays in translocation of recent photosynthate. Since daily mean Rs in Miscanthus coincided with levels 40% greater than the mean in barley, it is vital to select appropriate times to measure Rs if only single daily measurements are to be made.

Control of the Diurnal Pattern of Methane Emission from Emergent Aquatic Macrophytes by Gas Transport Mechanisms

NASA Technical Reports Server (NTRS)

Whiting, Gary J.; Chanton, Jeffrey P.

1995-01-01

Methane emissions from Typha latifolia (L.) showed a large mid-morning transient peak associated with rising light levels. This peak was also associated with a steep decline in lacunal CH, concentrations near the stem base. This pattern contrasted sharply with emissions from Peltandra virginica (L.) that gradually rose to a peak in the mid-afternoon corresponding to elevated air temperatures. Internal CH4 concentrations within P. virginica stems did not change significantly over the diurnal period. Stomatal conductance appeared to correlate directly with light levels in both plant types and were not associated with peak CH4 emission events in either plant. These patterns are consistent with a convective throughflow and diffusive gas ventilation systems for Typha and Peltandra, respectively. Further effects of the convective throughflow in T. latifolia were evident in the elevated CH4 concentrations measured within brown leaves as contrasted to the near ambient levels measured within live green leaves. Experimental manipulation of elevated and reduced CO2 levels in the atmosphere surrounding the plants and of light/dark periods suggested that stomatal aperture has little or no control of methane emissions from T. latifolia.

Retinoic Acid-Related Orphan Receptor γ (RORγ): A Novel Participant in the Diurnal Regulation of Hepatic Gluconeogenesis and Insulin Sensitivity

PubMed Central

Takeda, Yukimasa; Kang, Hong Soon; Freudenberg, Johannes; DeGraff, Laura M.; Jothi, Raja; Jetten, Anton M.

2014-01-01

The hepatic circadian clock plays a key role in the daily regulation of glucose metabolism, but the precise molecular mechanisms that coordinate these two biological processes are not fully understood. In this study, we identify a novel connection between the regulation of RORγ by the clock machinery and the diurnal regulation of glucose metabolic networks. We demonstrate that particularly at daytime, mice deficient in RORγ exhibit improved insulin sensitivity and glucose tolerance due to reduced hepatic gluconeogenesis. This is associated with a reduced peak expression of several glucose metabolic genes critical in the control of gluconeogenesis and glycolysis. Genome-wide cistromic profiling, promoter and mutation analysis support the concept that RORγ regulates the transcription of several glucose metabolic genes directly by binding ROREs in their promoter regulatory region. Similar observations were made in liver-specific RORγ-deficient mice suggesting that the changes in glucose homeostasis were directly related to the loss of hepatic RORγ expression. Altogether, our study shows that RORγ regulates several glucose metabolic genes downstream of the hepatic clock and identifies a novel metabolic function for RORγ in the diurnal regulation of hepatic gluconeogenesis and insulin sensitivity. The inhibition of the activation of several metabolic gene promoters by an RORγ antagonist suggests that antagonists may provide a novel strategy in the management of metabolic diseases, including type 2 diabetes. PMID:24831725

Susceptibility to depression expressed as alterations in cortisol day curve: a cross-twin, cross-trait study.

PubMed

Wichers, Marieke C; Myin-Germeys, Inez; Jacobs, Nele; Kenis, Gunter; Derom, Catherine; Vlietinck, Robert; Delespaul, Philippe; Mengelers, Ron; Peeters, Frenk; Nicolson, Nancy; Van Os, Jim

2008-04-01

To examine, using a cross-twin cross-trait design, the hypotheses 1) that the genetic and environmental susceptibility to depression is expressed, in part, as alterations in cortisol day curves and 2) that cortisol abnormalities are not merely the consequence of depressive states or the stressors associated with its onset. Alteration of diurnal secretion of cortisol is a possible endophenotype of depression, as depressed patients show alterations in cortisol dynamics over the day. Salivary cortisol measurements were obtained in a sample of 279 twin pairs at 10 random times a day for 5 days. A structured clinical interview for DSM-IV (Diagnostic and Statistical Manual of Mental Disorders, 4th Edition) axis I mood disorder (SCID) was administered. Using multilevel regression analysis, the moderating influence of a lifetime diagnosis of depression in the co-twin on the association between time of day and cortisol concentrations in the proband twin was examined. Diurnal variation in cortisol in the proband twin differed as a function of lifetime diagnosis of depression in the co-twin. In addition, this moderating effect was significantly stronger for dizygotic than for monozygotic twins. Probands of co-twins with lifetime depression have a different diurnal cortisol profile than those without, suggesting that altered hypothalamic-pituitary-adrenal axis functioning is an indicator of depression susceptibility.

The Cloud Top Distribution and Diurnal Variation of Clouds Over East Asia: Preliminary Results From Advanced Himawari Imager

NASA Astrophysics Data System (ADS)

Chen, Dandan; Guo, Jianping; Wang, Hongqing; Li, Jian; Min, Min; Zhao, Wenhui; Yao, Dan

2018-04-01

Clouds, as one of the most uncertain factors in climate system, have been intensively studied as satellites with advanced instruments emerged in recent years. However, few studies examine the vertical distributions of cloud top and their temporal variations over East Asia based on geostationary satellite data. In this study, the vertical structures of cloud top and its diurnal variations in summer of 2016 are analyzed using the Advanced Himawari Imager/Himawari-8 cloud products. Results show that clouds occur most frequently over the southern Tibetan Plateau and the Bay of Bengal. We find a steep gradient of cloud occurrence frequency extending from southwest to northeast China and low-value centers over the eastern Pacific and the Inner Mongolia Plateau. The vertical structures of cloud top are highly dependent on latitude, in addition to the nonnegligible roles of both terrain and land-sea thermal contrast. In terms of the diurnal cycle, clouds tend to occur more often in the afternoon, peaking around 1700 local time over land and ocean. The amplitude of cloud diurnal variation over ocean is much smaller than that over land, and complex terrain tends to be linked to larger amplitude. In vertical, the diurnal cycle of cloud frequency exhibits bimodal pattern over both land and ocean. The high-level peaks occur at almost the same altitude over land and ocean. In contrast, the low-level peaks over ocean mainly reside in the boundary layer, much lower than those over land, which could be indicative of the frequent occurrence of marine boundary layer clouds.

Patterns of Morning and Evening Fatigue Among Adults with HIV/AIDS

PubMed Central

Lerdal, Anners; Gay, Caryl L.; Aouizerat, Bradley E.; Portillo, Carmen J.; Lee, Kathryn A.

2011-01-01

Aims and objectives Describe patterns of morning and evening fatigue in adults with HIV and examine their relationship to demographic and clinical factors and other symptoms. Background Most studies of HIV-related fatigue assess average levels of fatigue and do not address its diurnal fluctuations. Patterns of fatigue over the course of the day may have important implications for assessment and treatment. Design A cross-sectional, correlational design was used with six repeated measures over 72 hours. Method A convenience sample of 318 HIV-infected adults was recruited in San Francisco. Socio-demographic, clinical and symptom data were collected with questionnaires. CD4+ T-cell count and viral load were obtained from medical records. Participants completed a four-item version of the Lee Fatigue Scale each morning and evening for three consecutive days. Participants were grouped based on their diurnal pattern of fatigue (high evening only, high morning only, high morning and evening and low morning and evening). Group comparisons and logistic regression were used to determine the unique predictors of each fatigue pattern. Results The high evening fatigue pattern was associated with anxiety and the high morning pattern was associated with anxiety and depression. The morning fatigue pattern showed very little fluctuation between morning and evening, the evening pattern showed the largest fluctuation. The high morning and evening pattern was associated with anxiety, depression and sleep disturbance and this group reported the most fatigue-related distress and interference in functioning. Conclusions These results provide initial evidence for the importance of assessing the patient’s daily pattern of fatigue fluctuation, as different patterns were associated with different symptom experiences and perhaps different etiologies. Relevance to clinical practice Different fatigue patterns may benefit from tailored intervention strategies. Management of depressive symptoms could be tested in patients who experience high levels of morning fatigue. PMID:21752119

Dissociation between diurnal cycles in locomotor activity, feeding behavior and hepatic PERIOD2 expression in chronic alcohol-fed mice

PubMed Central

Zhou, Peng; Werner, John H.; Lee, Donghoon; Sheppard, Aaron D.; Liangpunsakul, Suthat; Duffield, Giles E.

2015-01-01

Chronic alcohol consumption contributes to fatty liver disease. Our studies revealed that the hepatic circadian clock is disturbed in alcohol-induced hepatic steatosis, and effects of chronic alcohol administration upon the clock itself may contribute to steatosis. We extended these findings to explore the effects of chronic alcohol treatment on daily feeding and locomotor activity patterns. Mice were chronically pair-fed ad libitum for 4 weeks using the Lieber-DeCarli liquid diet, with calorie-controlled liquid and standard chow diets as control groups. Locomotor activity, feeding activity, and real-time bioluminescence recording of PERIOD2::LUCIFERASE expression in tissue explants were measured. Mice on liquid control and chow diets exhibited normal profiles of locomotor activity, with a ratio of 22:78% day/night activity and a peak during early night. This pattern was dramatically altered in alcohol-fed mice, marked by a 49:51% ratio and the absence of a distinct peak. While chow-diet fed mice had a normal 24:76% ratio of feeding activity, with a peak in the early night, this pattern was dramatically altered in both liquid-diet groups: mice had a 43:57% ratio, and an absence of a distinct peak. Temporal differences were also observed between the two liquid-diet groups during late day. Cosinor analysis revealed a ~4-h and ~6-h shift in the alcohol-fed group feeding and locomotor activity rhythms, respectively. Analysis of hepatic PER2 expression revealed that the molecular clock in alcohol-fed and control liquid-diet mice was shifted by ~11 h and ~6 h, respectively. No differences were observed in suprachiasmatic nucleus explants, suggesting that changes in circadian phase in the liver were generated independently from the central clock. These results suggest that chronic alcohol consumption and a liquid diet can differentially modulate the daily rhythmicity of locomotor and feeding behaviors, aspects that might contribute to disturbances in the circadian timing system and development of hepatic steatosis. PMID:25960184

Atmospheric waves on Venus as seen by the Venus Express Radio Science Experiment VeRa

NASA Astrophysics Data System (ADS)

Tellmann, S.; Häusler, B.; Hinson, D. P.; Tyler, G. L.; Andert, T. P.; Bird, M. K.; Imamura, T.; Pätzold, M.; Remus, S.

2013-09-01

Next to quasi-horizontal waves and eddies on near planetary scales, diurnally forced eddies and thermal tides, small-scale gravity waves and turbulence play a significant role in the development and maintenance of atmospheric super rotation.

Using diurnal streamflow and conductivity data to monitor and forecast runoff in a snowmelt dominated watershed

NASA Astrophysics Data System (ADS)

Miller, S.; Miller, S. N.

2016-12-01

Natural diurnal fluctuations in streamflow are common in many types of streams and scales for different reasons (i.e. snowmelt, evapotranspiration, infiltration, precipitation). Scientific literature has placed little consideration on the role diurnal cycles as they may appear insignificant from a water management point of view; however, recent insights into the timing and shape of the diurnal cycle have led to new methods for eco-hydrologic characterization of a given watershed. The diurnal effect is usually not detectible from visual investigation of a stream, but requires a minimum of hourly continuous measurement. In the 1990s the United States Geological Survey began collecting hourly river stage measurements for thousands of stream gauge stations across the US, ushering in new methods of analysis and comparison. A nested watershed study with ten stream gauging stations recording sub-hourly river stage was deployed in a snowmelt-dominated region of the Medicine Bow National Forest in southeastern Wyoming in 2013. In addition, at each stream gauging station sub-hourly conductivity and temperature data was recorded to aid in eco-hydrologic characterization of the different watersheds. Early summer results show asymmetry in the diurnal cycle during snowmelt, with a steeper rising and a flatter falling limb. As snowmelt becomes a less contributing component of streamflow later in the season, the asymmetry shifts to a flatter rising limb and steeper falling limb. Stream conductivity is low during snowmelt and begins to gradually increase as baseflow becomes a larger portion of total streamflow. The study region is recovering from a mountain pine beetle epidemic that peaked in 2008. Prior research suggests the bark beetle epidemic has had little effect on annual streamflow patterns; however, several results show an earlier shift in the day of year in which peak annual streamflow is observed. The diurnal cycle is likely to comprise a larger percentage of daily streamflow during snowmelt in post-epidemic forests, as more solar radiation is available to penetrate to the ground surface and induce snowmelt, contributing to the effect of an earlier observed peak annual streamflow.

Relative roles of emissions and meteorology in the diurnal pattern of urban PM10: analysis of the daylight saving time effect.

PubMed

Muñoz, Ricardo C

2012-06-01

Daylight saving time (DST) is a common practice in many countries, in which Official Time (OT) is abruptly shifted 1 hour with respect to solar time on two occasions every year (in fall and spring). All anthropogenic emitting processes tied to OT like job and school commuting traffic, abruptly change in this moment their timing with respect to solar time, inducing a sudden shift between emissions and the meteorological factors that control the dispersion and transport of air pollutants. Analyzing 13 years of hourly particulate matter (PM10) concentrations measured in Santiago, Chile, we demonstrate that the DST practice has observable non-trivial effects in the PM10 diurnal cycle. The clearest impact is in the morning peak of PM10 during the fall DST change, which occurs later and has on average a significant smaller magnitude in the days after the DST change as compared to the days before it. This decrease in magnitude is most remarkable because it occurs in a period of the year when overall PM10 concentrations increase due to generally worsening of the dispersion conditions. Results are shown for seven monitoring stations around the city, and for the fall and spring DST changes. They show clearly the interplay of emissions and meteorology in conditioning urban air pollution problems, highlighting the role of the morning and evening transitions of the atmospheric boundary layer in shaping the diurnal pattern of urban air pollutant concentrations.

New Insights into Activity Patterns in Children, Found Using Functional Data Analyses.

PubMed

Goldsmith, Jeff; Liu, Xinyue; Jacobson, Judith S; Rundle, Andrew

2016-09-01

Continuous monitoring of activity using accelerometers and other wearable devices provides objective, unbiased measurement of physical activity in minute-by-minute or finer resolutions. Accelerometers have already been widely deployed in studies of healthy aging, recovery of function after heart surgery, and other outcomes. Although common analyses of accelerometer data focus on single summary variables, such as the total or average activity count, there is growing interest in the determinants of diurnal profiles of activity. We use tools from functional data analysis (FDA), an area with an established statistical literature, to treat complete 24-h diurnal profiles as outcomes in a regression model. We illustrate the use of such models by analyzing data collected in New York City from 420 children participating in a Head Start program. Covariates of interest include season, sex, body mass index z-score, presence of an asthma diagnosis, and mother's birthplace. The FDA model finds several meaningful associations between several covariates and diurnal profiles of activity. In some cases, including shifted activity patterns for children of foreign-born mothers and time-specific effects of asthma on activity, these associations exist for covariates that are not associated with average activity count. FDA provides a useful statistical framework for settings in which the effect of covariates on the timing of activity is of interest. The use of similar models in other applications should be considered, and we make code public to facilitate this process.

The trehalose pathway in maize: conservation and gene regulation in response to the diurnal cycle and extended darkness.

PubMed

Henry, Clémence; Bledsoe, Samuel W; Siekman, Allison; Kollman, Alec; Waters, Brian M; Feil, Regina; Stitt, Mark; Lagrimini, L Mark

2014-11-01

Energy resources in plants are managed in continuously changing environments, such as changes occurring during the day/night cycle. Shading is an environmental disruption that decreases photosynthesis, compromises energy status, and impacts on crop productivity. The trehalose pathway plays a central but not well-defined role in maintaining energy balance. Here, we characterized the maize trehalose pathway genes and deciphered the impacts of the diurnal cycle and disruption of the day/night cycle on trehalose pathway gene expression and sugar metabolism. The maize genome encodes 14 trehalose-6-phosphate synthase (TPS) genes, 11 trehalose-6-phosphate phosphatase (TPP) genes, and one trehalase gene. Transcript abundance of most of these genes was impacted by the day/night cycle and extended dark stress, as were sucrose, hexose sugars, starch, and trehalose-6-phosphate (T6P) levels. After extended darkness, T6P levels inversely followed class II TPS and sucrose non-fermenting-related protein kinase 1 (SnRK1) target gene expression. Most significantly, T6P no longer tracked sucrose levels after extended darkness. These results showed: (i) conservation of the trehalose pathway in maize; (ii) that sucrose, hexose, starch, T6P, and TPS/TPP transcripts respond to the diurnal cycle; and(iii) that extended darkness disrupts the correlation between T6P and sucrose/hexose pools and affects SnRK1 target gene expression. A model for the role of the trehalose pathway in sensing of sucrose and energy status in maize seedlings is proposed. © The Author 2014. Published by Oxford University Press on behalf of the Society for Experimental Biology.

Cone-like rhodopsin expressed in the all-cone retina of the colubrid pine snake as a potential adaptation to diurnality.

PubMed

Bhattacharyya, Nihar; Darren, Benedict; Schott, Ryan K; Tropepe, Vincent; Chang, Belinda S W

2017-07-01

Colubridae is the largest and most diverse family of snakes, with visual systems that reflect this diversity, encompassing a variety of retinal photoreceptor organizations. The transmutation theory proposed by Walls postulates that photoreceptors could evolutionarily transition between cell types in squamates, but few studies have tested this theory. Recently, evidence for transmutation and rod-like machinery in an all-cone retina has been identified in a diurnal garter snake ( Thamnophis ), and it appears that the rhodopsin gene at least may be widespread among colubrid snakes. However, functional evidence supporting transmutation beyond the existence of the rhodopsin gene remains rare. We examined the all-cone retina of another colubrid, Pituophis melanoleucus , thought to be more secretive/burrowing than Thamnophis We found that P. melanoleucus expresses two cone opsins (SWS1, LWS) and rhodopsin (RH1) within the eye. Immunohistochemistry localized rhodopsin to the outer segment of photoreceptors in the all-cone retina of the snake and all opsin genes produced functional visual pigments when expressed in vitro Consistent with other studies, we found that P. melanoleucus rhodopsin is extremely blue-shifted. Surprisingly, P. melanoleucus rhodopsin reacted with hydroxylamine, a typical cone opsin characteristic. These results support the idea that the rhodopsin-containing photoreceptors of P. melanoleucus are the products of evolutionary transmutation from rod ancestors, and suggest that this phenomenon may be widespread in colubrid snakes. We hypothesize that transmutation may be an adaptation for diurnal, brighter-light vision, which could result in increased spectral sensitivity and chromatic discrimination with the potential for colour vision. © 2017. Published by The Company of Biologists Ltd.

CRTC2 activation in the suprachiasmatic nucleus, but not paraventricular nucleus, varies in a diurnal fashion and increases with nighttime light exposure.

PubMed

Highland, Julie A; Weiser, Michael J; Hinds, Laura R; Spencer, Robert L

2014-10-01

Entrainment of the intrinsic suprachiasmatic nucleus (SCN) molecular clock to the light-dark cycle depends on photic-driven intracellular signal transduction responses of SCN neurons that converge on cAMP response element-binding protein (CREB)-mediated regulation of gene transcription. Characterization of the CREB coactivator proteins CREB-regulated transcriptional coactivators (CRTCs) has revealed a greater degree of differential activity-dependent modulation of CREB transactivational function than previously appreciated. In confirmation of recent reports, we found an enrichment of crtc2 mRNA and prominent CRTC2 protein expression within the SCN of adult male rats. With use of a hypothalamic organotypic culture preparation for initial CRTC2-reactive antibody characterization, we found that CRTC2 immunoreactivity in hypothalamic neurons shifted from a predominantly cytoplasmic profile under basal culture conditions to a primarily nuclear localization (CRTC2 activation) 30 min after adenylate cyclase stimulation. In adult rat SCN, we found a diurnal variation in CRTC2 activation (peak at zeitgeber time of 4 h and trough at zeitgeber time of 16-20 h) but no variation in the total number of CRTC2-immunoreactive cells. There was no diurnal variation of CRTC2 activation in the hypothalamic paraventricular nucleus, another site of enriched CRTC2 expression. Exposure of rats to light (50 lux) for 30 min during the second half of their dark (nighttime) phase produced CRTC2 activation. We observed in the SCN a parallel change in the expression of a CREB-regulated gene (FOS). In contrast, nighttime light exposure had no effect on CRTC2 activation or FOS expression in the paraventricular nucleus, nor did it affect corticosterone hormone levels. These results suggest that CRTC2 participates in CREB-dependent photic entrainment of SCN function. Copyright © 2014 the American Physiological Society.

Over-Expression of GmGIa-Regulated Soybean miR172a Confers Early Flowering in Transgenic Arabidopsis thaliana.

PubMed

Wang, Tao; Sun, Ming-Yang; Wang, Xue-Song; Li, Wen-Bin; Li, Yong-Guang

2016-04-29

Flowering is a pivotal event in the life cycle of plants. miR172 has been widely confirmed to play critical roles in flowering time control by regulating its target gene expression in Arabidopsis. However, the role of its counterpart in soybean remains largely unclear. In the present study, we found that the gma-miR172a was regulated by a GIGANTEA ortholog, GmGIa, in soybean through miRNA metabolism. The expression analysis revealed that gma-miR172a has a pattern of diurnal rhythm expression and its abundance increased rapidly as plants grew until the initiation of flowering phase in soybean. One target gene of gma-miR172a, Glyma03g33470, was predicted and verified using a modified RLM 5'-RACE (RNA ligase-mediated rapid amplification of 5' cDNA ends) assay. Overexpression of gma-miR172a exhibited an early flowering phenotype and the expression of FT, AP1 and LFY were simultaneously increased in gma-miR172a-transgenic Arabidopsis plants, suggesting that the early flowering phenotype was associated with up-regulation of these genes. The overexpression of the gma-miR172a-resistant version of Glyma03g33470 weakened early flowering phenotype in the toe1 mutant of Arabidopsis. Taken together, our results suggested that gma-miR172a played an important role in GmGIa-mediated flowering by repressing Glyma03g33470, which in turn increased the expression of FT, AP1 and LFY to promote flowering in soybean.

SUMOylation of phytochrome-B negatively regulates light-induced signaling in Arabidopsis thaliana

PubMed Central

Sadanandom, Ari; Ádám, Éva; Orosa, Beatriz; Viczián, András; Klose, Cornelia; Zhang, Cunjin; Josse, Eve-Marie; Kozma-Bognár, László; Nagy, Ferenc

2015-01-01

The red/far red light absorbing photoreceptor phytochrome-B (phyB) cycles between the biologically inactive (Pr, λmax, 660 nm) and active (Pfr; λmax, 730 nm) forms and functions as a light quality and quantity controlled switch to regulate photomorphogenesis in Arabidopsis. At the molecular level, phyB interacts in a conformation-dependent fashion with a battery of downstream regulatory proteins, including PHYTOCHROME INTERACTING FACTOR transcription factors, and by modulating their activity/abundance, it alters expression patterns of genes underlying photomorphogenesis. Here we report that the small ubiquitin-like modifier (SUMO) is conjugated (SUMOylation) to the C terminus of phyB; the accumulation of SUMOylated phyB is enhanced by red light and displays a diurnal pattern in plants grown under light/dark cycles. Our data demonstrate that (i) transgenic plants expressing the mutant phyBLys996Arg-YFP photoreceptor are hypersensitive to red light, (ii) light-induced SUMOylation of the mutant phyB is drastically decreased compared with phyB-YFP, and (iii) SUMOylation of phyB inhibits binding of PHYTOCHROME INTERACTING FACTOR 5 to phyB Pfr. In addition, we show that OVERLY TOLERANT TO SALT 1 (OTS1) de-SUMOylates phyB in vitro, it interacts with phyB in vivo, and the ots1/ots2 mutant is hyposensitive to red light. Taken together, we conclude that SUMOylation of phyB negatively regulates light signaling and it is mediated, at least partly, by the action of OTS SUMO proteases. PMID:26283376

CONCENTRATIONS AND PATTERNS OF PHOTOCHEMICAL OXIDANTS IN THE U.S.

EPA Science Inventory

The report describes ozone and PAN levels at urban sites in the U.S., and of ozone at selected nonurban sites. Sample diurnal curves for ozone at suburban and nonurban sites are presented. Highest concentrations of both oxidants occur in California, where the second-highest 1-hr ...

Crepuscular flight activity of an invasive insect governed by interacting abiotic factors

Treesearch

Yigen Chen; Steven J. Seybold

2014-01-01

Seasonal and diurnal flight patterns of the invasive walnut twig beetle, Pityophthorus juglandis, were assessed between 2011 and 2014 in northern California, USA in the context of the effects of ambient temperature, light intensity, wind speed, and barometric pressure. Pityophthorus juglandis generally initiated flight in late...

Atmospheric stability and diurnal patterns of aeolian saltation on the Llano Estacado

USDA-ARS?s Scientific Manuscript database

Aeolian transport is driven by aerodynamic surface stress imposed by turbulent winds in the Earth’s atmospheric boundary layer (ABL). ABL regime is influenced by stratification, which can either enhance or suppress production of turbulence by shear associated with the vertical gradient of streamwise...

Genetic diversity in the environmental conditioning of two sorghum (Sorghum bicolor L.) hybrids

USDA-ARS?s Scientific Manuscript database

Sorghum metabolism continually adapts to environmental temperature as thermal patterns modulate diurnally and seasonally. The degree of adaptation to any given temperature may be difficult to determine from phenotypic responses of the plants. The present study was designed to see if the efficiency o...

Effects of soil moisture on the diurnal pattern of pesticide emission: Numerical simulation and sensitivity analysis

USDA-ARS?s Scientific Manuscript database

Accurate prediction of pesticide volatilization is important for the protection of human and environmental health. Due to the complexity of the volatilization process, sophisticated predictive models are needed, especially for dry soil conditions. A mathematical model was developed to allow simulati...

Dysregulation of the cortisol diurnal rhythm following prenatal alcohol exposure and early life adversity.

PubMed

McLachlan, Kaitlyn; Rasmussen, Carmen; Oberlander, Tim F; Loock, Christine; Pei, Jacqueline; Andrew, Gail; Reynolds, James; Weinberg, Joanne

2016-06-01

The hypothalamic-pituitary-adrenal (HPA) axis is impacted by a multitude of pre- and postnatal factors. Developmental programming of HPA axis function by prenatal alcohol exposure (PAE) has been demonstrated in animal models and in human infants, but remains understudied in older children and adolescents. Moreover, early life adversity (ELA), which occurs at higher rates in children with PAE than in non-exposed children, may also play a role in programming the stress response system. In a cohort of children and adolescents with PAE and ELA (PAE + ELA), we evaluated HPA function through assessment of diurnal cortisol activity compared to that in typically developing controls, as well as the associations among specific ELAs, adverse outcomes, protective factors, and diurnal cortisol. Morning and evening saliva samples were taken under basal conditions from 42 children and adolescents (5-18 years) with PAE + ELA and 43 typically developing controls. High rates of ELA were shown among children with PAE, and significantly higher evening cortisol levels and a flatter diurnal slope were observed in children with PAE + ELA, compared to controls. Medication use in the PAE + ELA group was associated with lower morning cortisol levels, which were comparable to controls. Complex associations were found among diurnal cortisol patterns in the PAE + ELA group and a number of ELAs and later adverse outcomes, whereas protective factors were associated with more typical diurnal rhythms. These results complement findings from research on human infants and animal models showing dysregulated HPA function following PAE, lending weight to the suggestion that PAE and ELA may interact to sensitize the developing HPA axis. The presence of protective factors may buffer altered cortisol regulation, underscoring the importance of early assessment and interventions for children with FASD, and in particular, for the many children with FASD who also have ELA. Copyright © 2016 Elsevier Inc. All rights reserved.

Dysregulation of the cortisol diurnal rhythm following prenatal alcohol exposure and early life adversity

PubMed Central

McLachlan, Kaitlyn; Rasmussen, Carmen; Oberlander, Tim F.; Loock, Christine; Pei, Jacqueline; Andrew, Gail; Reynolds, James; Weinberg, Joanne

2016-01-01

The hypothalamic-pituitary-adrenal (HPA) axis is impacted by a multitude of pre- and postnatal factors. Developmental programming of HPA axis function by prenatal alcohol exposure (PAE) has been demonstrated in animal models and in human infants, but remains understudied in older children and adolescents. Moreover, early life adversity (ELA), which occurs at higher rates in children with PAE than in non-exposed children, may also play a role in programming the HPA or stress response system. In a cohort of children and adolescents with PAE and ELA (PAE + ELA), we evaluated HPA function through assessment of diurnal cortisol activity compared to that in typically developing controls, as well as the associations among specific ELAs, adverse outcomes, protective factors, and diurnal cortisol. Morning and evening saliva samples were taken under basal conditions from 42 children and adolescents (5–18 years) with PAE + ELA and 43 typically developing controls. High rates of ELA were shown among children with PAE, and significantly higher evening cortisol levels and a flatter diurnal slope were observed in children with PAE + ELA, compared to controls. Medication use in the PAE + ELA group was associated with lower morning cortisol levels, which were comparable to controls. Complex associations were found among diurnal cortisol patterns in the PAE + ELA group and a number of ELAs and later adverse outcomes, whereas protective factors were associated with more typical diurnal rhythms. These results complement findings from research on human infants and animal models showing dysregulated HPA function following PAE, lending weight to the suggestion that PAE and ELA may interact to sensitize the developing HPA axis. The presence of protective factors may buffer altered cortisol regulation, underscoring the importance of early assessment and interventions for children with FASD, and in particular, for the many children with FASD who also have ELA. PMID:27286932

Terpenoid Metabolism in Wild-Type and Transgenic Arabidopsis PlantsW⃞

PubMed Central

Aharoni, Asaph; Giri, Ashok P.; Deuerlein, Stephan; Griepink, Frans; de Kogel, Willem-Jan; Verstappen, Francel W. A.; Verhoeven, Harrie A.; Jongsma, Maarten A.; Schwab, Wilfried; Bouwmeester, Harro J.

2003-01-01

Volatile components, such as terpenoids, are emitted from aerial parts of plants and play a major role in the interaction between plants and their environment. Analysis of the composition and emission pattern of volatiles in the model plant Arabidopsis showed that a range of volatile components are released, primarily from flowers. Most of the volatiles detected were monoterpenes and sesquiterpenes, which in contrast to other volatiles showed a diurnal emission pattern. The active terpenoid metabolism in wild-type Arabidopsis provoked us to conduct an additional set of experiments in which transgenic Arabidopsis overexpressing two different terpene synthases were generated. Leaves of transgenic plants constitutively expressing a dual linalool/nerolidol synthase in the plastids (FaNES1) produced linalool and its glycosylated and hydroxylated derivatives. The sum of glycosylated components was in some of the transgenic lines up to 40- to 60-fold higher than the sum of the corresponding free alcohols. Surprisingly, we also detected the production and emission of nerolidol, albeit at a low level, suggesting that a small pool of its precursor farnesyl diphosphate is present in the plastids. Transgenic lines with strong transgene expression showed growth retardation, possibly as a result of the depletion of isoprenoid precursors in the plastids. In dual-choice assays with Myzus persicae, the FaNES1-expressing lines significantly repelled the aphids. Overexpression of a typical cytosolic sesquiterpene synthase resulted in the production of only trace amounts of the expected sesquiterpene, suggesting tight control of the cytosolic pool of farnesyl diphosphate, the precursor for sesquiterpenoid biosynthesis. This study further demonstrates the value of Arabidopsis for studies of the biosynthesis and ecological role of terpenoids and provides new insights into their metabolism in wild-type and transgenic plants. PMID:14630967

Orexin gene therapy restores the timing and maintenance of wakefulness in narcoleptic mice.

PubMed

Kantor, Sandor; Mochizuki, Takatoshi; Lops, Stefan N; Ko, Brian; Clain, Elizabeth; Clark, Erika; Yamamoto, Mihoko; Scammell, Thomas E

2013-08-01

Narcolepsy is caused by selective loss of the orexin/hypocretin-producing neurons of the hypothalamus. For patients with narcolepsy, chronic sleepiness is often the most disabling symptom, but current therapies rarely normalize alertness and do not address the underlying orexin deficiency. We hypothesized that the sleepiness of narcolepsy would substantially improve if orexin signaling were restored in specific brain regions at appropriate times of day. We used gene therapy to restore orexin signaling in a mouse model of narcolepsy. In these Atx mice, expression of a toxic protein (ataxin-3) selectively kills the orexin neurons. To induce ectopic expression of the orexin neuropeptides, we microinjected an adeno-associated viral vector coding for prepro-orexin plus a red fluorescence protein (AAV-orexin) into the mediobasal hypothalamus of Atx and wild-type mice. Control mice received an AAV coding only for red fluorescence protein. Two weeks later, we recorded sleep/wake behavior, locomotor activity, and body temperature and examined the patterns of orexin expression. Atx mice rescued with AAV-orexin produced long bouts of wakefulness and had a normal diurnal pattern of arousal, with the longest bouts of wake and the highest amounts of locomotor activity in the first hours of the night. In addition, AAV-orexin improved the timing of rapid eye movement sleep and the consolidation of nonrapid eye movement sleep in Atx mice. These substantial improvements in sleepiness and other symptoms of narcolepsy demonstrate the effectiveness of orexin gene therapy in a mouse model of narcolepsy. Additional work is needed to optimize this approach, but in time, AAV-orexin could become a useful therapeutic option for patients with narcolepsy.

Wind speed statistics for Goldstone, California, anemometer sites

NASA Technical Reports Server (NTRS)

Berg, M.; Levy, R.; Mcginness, H.; Strain, D.

1981-01-01

An exploratory wind survey at an antenna complex was summarized statistically for application to future windmill designs. Data were collected at six locations from a total of 10 anemometers. Statistics include means, standard deviations, cubes, pattern factors, correlation coefficients, and exponents for power law profile of wind speed. Curves presented include: mean monthly wind speeds, moving averages, and diurnal variation patterns. It is concluded that three of the locations have sufficiently strong winds to justify consideration for windmill sites.

Chronic ethanol consumption disrupts diurnal rhythms of hepatic glycogen metabolism in mice

PubMed Central

Udoh, Uduak S.; Swain, Telisha M.; Filiano, Ashley N.; Gamble, Karen L.; Young, Martin E.

2015-01-01

Chronic ethanol consumption has been shown to significantly decrease hepatic glycogen content; however, the mechanisms responsible for this adverse metabolic effect are unknown. In this study, we examined the impact chronic ethanol consumption has on time-of-day-dependent oscillations (rhythms) in glycogen metabolism processes in the liver. For this, male C57BL/6J mice were fed either a control or ethanol-containing liquid diet for 5 wk, and livers were collected every 4 h for 24 h and analyzed for changes in various genes and proteins involved in hepatic glycogen metabolism. Glycogen displayed a robust diurnal rhythm in the livers of mice fed the control diet, with the peak occurring during the active (dark) period of the day. The diurnal glycogen rhythm was significantly altered in livers of ethanol-fed mice, with the glycogen peak shifted into the inactive (light) period and the overall content of glycogen decreased compared with controls. Chronic ethanol consumption further disrupted diurnal rhythms in gene expression (glycogen synthase 1 and 2, glycogenin, glucokinase, protein targeting to glycogen, and pyruvate kinase), total and phosphorylated glycogen synthase protein, and enzyme activities of glycogen synthase and glycogen phosphorylase, the rate-limiting enzymes of glycogen metabolism. In summary, these results show for the first time that chronic ethanol consumption disrupts diurnal rhythms in hepatic glycogen metabolism at the gene and protein level. Chronic ethanol-induced disruption in these daily rhythms likely contributes to glycogen depletion and disruption of hepatic energy homeostasis, a recognized risk factor in the etiology of alcoholic liver disease. PMID:25857999

Disruption of the circadian clock within the cardiomyocyte influences mycardial contractile function, metabolism, and gene expression

USDA-ARS?s Scientific Manuscript database

Virtually every mammalian cell, including cardiomyocytes, possesses an intrinsic circadian clock. The role of this transcriptionally based molecular mechanism in cardiovascular biology is poorly understood. We hypothesized that the circadian clock within the cardiomyocyte influences diurnal variatio...

Basic results of medical examinations of Soyuz spacecraft crew members

NASA Technical Reports Server (NTRS)

Gurovskiy, N. N.; Yegorov, A. D.; Kakurin, L. I.; Nefedov, Y. G.

1975-01-01

Weightlessness, hypokinesia and intense activity of crew members caused changes in human physiological functions during prolonged space flight as expressed in unusual diurnal rhythms. Microclimate, radiation and the nervous emotional state were not of significance in emergence of human body response reactions.

Uncovering the mystery of opposite circadian rhythms between mouse and human leukocytes in humanized mice.

PubMed

Zhao, Yue; Liu, Min; Chan, Xue Ying; Tan, Sue Yee; Subramaniam, Sharrada; Fan, Yong; Loh, Eva; Chang, Kenneth Tou En; Tan, Thiam Chye; Chen, Qingfeng

2017-11-02

Many immune parameters show circadian rhythms during the 24-hour day in mammals. The most striking circadian oscillation is the number of circulating immune cells that display an opposite rhythm between humans and mice. The physiological roles and mechanisms of circadian variations in mouse leukocytes are well studied, whereas for humans they remain unclear because of the lack of a proper model. In this study, we found that consistent with their natural host species, mouse and human circulating leukocytes exhibited opposite circadian oscillations in humanized mice. This cyclic pattern of trafficking correlated well with the diurnal expression levels of C-X-C chemokine receptor 4, which were controlled by the intracellular hypoxia-inducible factor 1α/aryl hydrocarbon receptor nuclear translocator-like heterodimer. Furthermore, we also discovered that p38 mitogen-activated protein kinases/mitogen-activated 2 had opposite effects between mice and humans in generating intracellular reactive oxygen species, which subsequently regulated HIF-1α expression. In conclusion, we propose humanized mice as a robust model for human circadian studies and reveal insights on a novel molecular clock network in the human circadian rhythm. © 2017 by The American Society of Hematology.

The complete spectrum of the equatorial electrojet related to solar tides: CHAMP observations

NASA Astrophysics Data System (ADS)

Lühr, H.; Manoj, C.

2013-08-01

Based on 10 yr of magnetic field measurements by the CHAMP satellite we draw a detailed picture of the equatorial electrojet (EEJ) tidal variations. For the first time the complete EEJ spectrum related to average solar tides has been compiled. A large fraction of the resulting spectrum is related to the switch on/off of the EEJ between day and night. This effect has carefully been considered when interpreting the results. As expected, largest amplitudes are caused by the migrating tides representing the mean diurnal variation. Higher harmonics of the daily variations show a 1/f fall-off in amplitude. Such a spectrum is required to represent the vanishing of the EEJ current at night. The migrating tidal signal exhibits a distinct annual variation with large amplitudes during December solstice and equinox seasons but a depression by a factor of 1.7 around June-July. A rich spectrum of non-migrating tidal effects is deduced. Most prominent is the four-peaked longitudinal pattern around August. Almost 90% of the structure can be attributed to the diurnal eastward-propagating tide DE3. In addition the westward-propagating DW5 is contributing to wave-4. The second-largest non-migrating tide is the semi-diurnal SW4 around December solstice. It causes a wave-2 feature in satellite observations. The three-peaked longitudinal pattern, often quoted as typical for the December season, is significantly weaker. During the months around May-June a prominent wave-1 feature appears. To first order it represents a stationary planetary wave SPW1 which causes an intensification of the EEJ at western longitudes beyond 60° W and a weakening over Africa/India. In addition, a prominent ter-diurnal non-migrating tide TW4 causes the EEJ to peak later, at hours past 14:00 local time in the western sector. A particularly interesting non-migrating tide is the semi-diurnal SW3. It causes largest EEJ amplitudes from October through December. This tidal component shows a strong dependence on solar flux level with increasing amplitudes towards solar maximum. We are not aware of any previous studies mentioning this behaviour of SW3. The main focus of this study is to present the observed EEJ spectrum and its relation to tidal driving. For several of the identified spectral components we cannot offer convincing explanations for the generation mechanisms.

Diurnal ocean surface layer model validation

NASA Technical Reports Server (NTRS)

Hawkins, Jeffrey D.; May, Douglas A.; Abell, Fred, Jr.

1990-01-01

The diurnal ocean surface layer (DOSL) model at the Fleet Numerical Oceanography Center forecasts the 24-hour change in a global sea surface temperatures (SST). Validating the DOSL model is a difficult task due to the huge areas involved and the lack of in situ measurements. Therefore, this report details the use of satellite infrared multichannel SST imagery to provide day and night SSTs that can be directly compared to DOSL products. This water-vapor-corrected imagery has the advantages of high thermal sensitivity (0.12 C), large synoptic coverage (nearly 3000 km across), and high spatial resolution that enables diurnal heating events to be readily located and mapped. Several case studies in the subtropical North Atlantic readily show that DOSL results during extreme heating periods agree very well with satellite-imagery-derived values in terms of the pattern of diurnal warming. The low wind and cloud-free conditions necessary for these events to occur lend themselves well to observation via infrared imagery. Thus, the normally cloud-limited aspects of satellite imagery do not come into play for these particular environmental conditions. The fact that the DOSL model does well in extreme events is beneficial from the standpoint that these cases can be associated with the destruction of the surface acoustic duct. This so-called afternoon effect happens as the afternoon warming of the mixed layer disrupts the sound channel and the propagation of acoustic energy.

Associations between circadian and stress response cortisol in children.

PubMed

Simons, Sterre S H; Cillessen, Antonius H N; de Weerth, Carolina

2017-01-01

Hypothalamic-pituitary-adrenal (HPA) axis functioning is characterized by the baseline production of cortisol following a circadian rhythm, as well as by the superimposed production of cortisol in response to a stressor. However, it is relatively unknown whether the basal cortisol circadian rhythm is associated with the cortisol stress response in children. Since alterations in cortisol stress responses have been associated with mental and physical health, this study investigated whether the cortisol circadian rhythm is associated with cortisol stress responses in 6-year-old children. To this end, 149 normally developing children (M age  = 6.09 years; 70 girls) participated in an innovative social evaluative stress test that effectively provoked increases in cortisol. To determine the cortisol stress response, six cortisol saliva samples were collected and two cortisol stress response indices were calculated: total stress cortisol and cortisol stress reactivity. To determine children's cortisol circadian rhythm eight cortisol circadian samples were collected during two days. Total diurnal cortisol and diurnal cortisol decline scores were calculated as indices of the cortisol circadian rhythm. Hierarchical regression analyses indicated that higher total diurnal cortisol as well as a smaller diurnal cortisol decline, were both uniquely associated with higher total stress cortisol. No associations were found between the cortisol circadian rhythm indices and cortisol stress reactivity. Possible explanations for the patterns found are links with children's self-regulatory capacities and parenting quality.

Diurnal flight behavior of Ichneumonoidea (Insecta: Hymenoptera) related to environmental factors in a tropical dry forest.

PubMed

González-Moreno, A; Bordera, S; Leirana-Alcocer, J; Delfín-González, H

2012-06-01

The biology and behavior of insects are strongly influenced by environmental conditions such as temperature and precipitation. Because some of these factors present a within day variation, they may be causing variations on insect diurnal flight activity, but scant information exists on the issue. The aim of this work was to describe the patterns on diurnal variation of the abundance of Ichneumonoidea and their relation with relative humidity, temperature, light intensity, and wind speed. The study site was a tropical dry forest at Ría Lagartos Biosphere Reserve, Mexico; where correlations between environmental factors (relative humidity, temperature, light, and wind speed) and abundance of Ichneumonidae and Braconidae (Hymenoptera: Ichneumonoidea) were estimated. The best regression model for explaining abundance variation was selected using the second order Akaike Information Criterion. The optimum values of temperature, humidity, and light for flight activity of both families were also estimated. Ichneumonid and braconid abundances were significantly correlated to relative humidity, temperature, and light intensity; ichneumonid also showed significant correlations to wind speed. The second order Akaike Information Criterion suggests that in tropical dry conditions, relative humidity is more important that temperature for Ichneumonoidea diurnal activity. Ichneumonid wasps selected toward intermediate values of relative humidity, temperature and the lowest wind speeds; while Braconidae selected for low values of relative humidity. For light intensity, braconids presented a positive selection for moderately high values.

Seizure phenotypes, periodicity, and sleep-wake pattern of seizures in Kcna-1 null mice.

PubMed

Wright, Samantha; Wallace, Eli; Hwang, Youngdeok; Maganti, Rama

2016-02-01

This study was undertaken to describe seizure phenotypes, natural progression, sleep-wake patterns, as well as periodicity of seizures in Kcna-1 null mutant mice. These mice were implanted with epidural electroencephalography (EEG) and electromyography (EMG) electrodes, and simultaneous video-EEG recordings were obtained while animals were individually housed under either diurnal (LD) condition or constant darkness (DD) over ten days of recording. The video-EEG data were analyzed to identify electrographic and behavioral phenotypes and natural progression and to examine the periodicity of seizures. Sleep-wake patterns were analyzed to understand the distribution and onset of seizures across the sleep-wake cycle. Four electrographically and behaviorally distinct seizure types were observed. Regardless of lighting condition that animals were housed in, Kcna-1 null mice initially expressed only a few of the most severe seizure types that progressively increased in frequency and decreased in seizure severity. In addition, a circadian periodicity was noted, with seizures peaking in the first 12h of the Zeitgeber time (ZT) cycle, regardless of lighting conditions. Interestingly, seizure onset differed between lighting conditions where more seizures arose out of sleep in LD conditions, whereas under DD conditions, the majority occurred out of the wakeful state. We suggest that this model be used to understand the circadian pattern of seizures as well as the pathophysiological implications of sleep and circadian disturbances in limbic epilepsies. Copyright © 2015 Elsevier Inc. All rights reserved.

Detection of Diurnal Variation of Tomato Transcriptome through the Molecular Timetable Method in a Sunlight-Type Plant Factory.

PubMed

Higashi, Takanobu; Tanigaki, Yusuke; Takayama, Kotaro; Nagano, Atsushi J; Honjo, Mie N; Fukuda, Hirokazu

2016-01-01

The timing of measurement during plant growth is important because many genes are expressed periodically and orchestrate physiological events. Their periodicity is generated by environmental fluctuations as external factors and the circadian clock as the internal factor. The circadian clock orchestrates physiological events such as photosynthesis or flowering and it enables enhanced growth and herbivory resistance. These characteristics have possible applications for agriculture. In this study, we demonstrated the diurnal variation of the transcriptome in tomato (Solanum lycopersicum) leaves through molecular timetable method in a sunlight-type plant factory. Molecular timetable methods have been developed to detect periodic genes and estimate individual internal body time from these expression profiles in mammals. We sampled tomato leaves every 2 h for 2 days and acquired time-course transcriptome data by RNA-Seq. Many genes were expressed periodically and these expressions were stable across the 1st and 2nd days of measurement. We selected 143 time-indicating genes whose expression indicated periodically, and estimated internal time in the plant from these expression profiles. The estimated internal time was generally the same as the external environment time; however, there was a difference of more than 1 h between the two for some sampling points. Furthermore, the stress-responsive genes also showed weakly periodic expression, implying that they were usually expressed periodically, regulated by light-dark cycles as an external factor or the circadian clock as the internal factor, and could be particularly expressed when the plant experiences some specific stress under agricultural situations. This study suggests that circadian clock mediate the optimization for fluctuating environments in the field and it has possibilities to enhance resistibility to stress and floral induction by controlling circadian clock through light supplement and temperature control.

Detection of Diurnal Variation of Tomato Transcriptome through the Molecular Timetable Method in a Sunlight-Type Plant Factory

PubMed Central

Higashi, Takanobu; Tanigaki, Yusuke; Takayama, Kotaro; Nagano, Atsushi J.; Honjo, Mie N.; Fukuda, Hirokazu

2016-01-01

The timing of measurement during plant growth is important because many genes are expressed periodically and orchestrate physiological events. Their periodicity is generated by environmental fluctuations as external factors and the circadian clock as the internal factor. The circadian clock orchestrates physiological events such as photosynthesis or flowering and it enables enhanced growth and herbivory resistance. These characteristics have possible applications for agriculture. In this study, we demonstrated the diurnal variation of the transcriptome in tomato (Solanum lycopersicum) leaves through molecular timetable method in a sunlight-type plant factory. Molecular timetable methods have been developed to detect periodic genes and estimate individual internal body time from these expression profiles in mammals. We sampled tomato leaves every 2 h for 2 days and acquired time-course transcriptome data by RNA-Seq. Many genes were expressed periodically and these expressions were stable across the 1st and 2nd days of measurement. We selected 143 time-indicating genes whose expression indicated periodically, and estimated internal time in the plant from these expression profiles. The estimated internal time was generally the same as the external environment time; however, there was a difference of more than 1 h between the two for some sampling points. Furthermore, the stress-responsive genes also showed weakly periodic expression, implying that they were usually expressed periodically, regulated by light–dark cycles as an external factor or the circadian clock as the internal factor, and could be particularly expressed when the plant experiences some specific stress under agricultural situations. This study suggests that circadian clock mediate the optimization for fluctuating environments in the field and it has possibilities to enhance resistibility to stress and floral induction by controlling circadian clock through light supplement and temperature control. PMID:26904059

A hormonal approach to anti-social behaviour.

PubMed

Loomans, Max M; Tulen, Joke H M; de Rijke, Yolanda B; van Marle, Hjalmar J C

2016-12-01

Altered levels of cortisol and testosterone have previously been associated with anti-social personality disorder (ASPD) and psychopathy, but there is some conflicting evidence as to how characteristic these findings are. To test the hypothesis that diurnal fluctuations in cortisol and/or testosterone will differentiate ASPD and psychopathy among male forensic psychiatric inpatients and distinguish both groups from healthy men not in treatment. One hundred and sixty-six men participated: 81 patients with ASPD, 42 of whom had a Psychopathy Checklist-Revised (PCL-R) score of 26 or more and 39 with a score of 25 or less, 51 forensic hospital employees and 34 general population men. None in the latter two groups had abnormal personality traits. For each person, diurnal cortisol and testosterone saliva samples were collected. Both patient groups and the forensic hospital employees showed significantly higher diurnal testosterone levels than the general population, community-based men. The community men showed significantly lower values in their diurnal cortisol variation than the ASPD and psychopathy groups but, in this, were similar to the forensic employee group. Neither cortisol nor testosterone levels differentiated the higher from lower Psychopathy Checklist-Revised scorers. We replicated findings of diurnal testosterone deficiencies among men with psychopathy and ASPD, but we were unable to differentiate patients groups from each other or from the hospital employees on cortisol measures. This suggests a case for more research with more diverse comparison groups and more differentiation of personality traits before drawing definitive conclusions about distinctive hormonal patterns among men with psychopathy, as external environmental variables may prove more influential than previously suspected. Copyright © 2015 John Wiley & Sons, Ltd. Copyright © 2015 John Wiley & Sons, Ltd.

Genetic Dissection of Dual Roles for the Transcription Factor six7 in Photoreceptor Development and Patterning in Zebrafish

PubMed Central

Sotolongo-Lopez, Mailin; Alvarez-Delfin, Karen; Saade, Carole J.; Vera, Daniel L.; Fadool, James M.

2016-01-01

The visual system of a particular species is highly adapted to convey detailed ecological and behavioral information essential for survival. The consequences of structural mutations of opsins upon spectral sensitivity and environmental adaptation have been studied in great detail, but lacking is knowledge of the potential influence of alterations in gene regulatory networks upon the diversity of cone subtypes and the variation in the ratio of rods and cones observed in numerous diurnal and nocturnal species. Exploiting photoreceptor patterning in cone-dominated zebrafish, we uncovered two independent mechanisms by which the sine oculis homeobox homolog 7 (six7) regulates photoreceptor development. In a genetic screen, we isolated the lots-of-rods-junior (ljrp23ahub) mutation that resulted in an increased number and uniform distribution of rods in otherwise normal appearing larvae. Sequence analysis, genome editing using TALENs and knockdown strategies confirm ljrp23ahub as a hypomorphic allele of six7, a teleost orthologue of six3, with known roles in forebrain patterning and expression of opsins. Based on the lack of predicted protein-coding changes and a deletion of a conserved element upstream of the transcription start site, a cis-regulatory mutation is proposed as the basis of the reduced expression of six7 in ljrp23ahub. Comparison of the phenotypes of the hypomorphic and knock-out alleles provides evidence of two independent roles in photoreceptor development. EdU and PH3 labeling show that the increase in rod number is associated with extended mitosis of photoreceptor progenitors, and TUNEL suggests that the lack of green-sensitive cones is the result of cell death of the cone precursor. These data add six7 to the small but growing list of essential genes for specification and patterning of photoreceptors in non-mammalian vertebrates, and highlight alterations in transcriptional regulation as a potential source of photoreceptor variation across species. PMID:27058886

Brachypodium distachyon as a new model system for understanding iron homeostasis in grasses: phylogenetic and expression analysis of Yellow Stripe-Like (YSL) transporters

PubMed Central

Yordem, Burcu K.; Conte, Sarah S.; Ma, Jian Feng; Yokosho, Kengo; Vasques, Kenneth A.; Gopalsamy, Srinivasa N.; Walker, Elsbeth L.

2011-01-01

Background and Aims Brachypodium distachyon is a temperate grass with a small stature, rapid life cycle and completely sequenced genome that has great promise as a model system to study grass-specific traits for crop improvement. Under iron (Fe)-deficient conditions, grasses synthesize and secrete Fe(III)-chelating agents called phytosiderophores (PS). In Zea mays, Yellow Stripe1 (ZmYS1) is the transporter responsible for the uptake of Fe(III)–PS complexes from the soil. Some members of the family of related proteins called Yellow Stripe-Like (YSL) have roles in internal Fe translocation of plants, while the function of other members remains uninvestigated. The aim of this study is to establish brachypodium as a model system to study Fe homeostasis in grasses, identify YSL proteins in brachypodium and maize, and analyse their expression profiles in brachypodium in response to Fe deficiency. Methods The YSL family of proteins in brachypodium and maize were identified based on sequence similarity to ZmYS1. Expression patterns of the brachypodium YSL genes (BdYSL genes) were determined by quantitative RT–PCR under Fe-deficient and Fe-sufficient conditions. The types of PS secreted, and secretion pattern of PS in brachypodium were analysed by high-performance liquid chromatography. Key Results Eighteen YSL family members in maize and 19 members in brachypodium were identified. Phylogenetic analysis revealed that some YSLs group into a grass-specific clade. The Fe status of the plant can regulate expression of brachypodium YSL genes in both shoots and roots. 3-Hydroxy-2′-deoxymugineic acid (HDMA) is the dominant type of PS secreted by brachypodium, and its secretion is diurnally regulated. Conclusions PS secretion by brachypodium parallels that of related crop species such as barley and wheat. A single grass species-specific YSL clade is present, and expression of the BdYSL members of this clade could not be detected in shoots or roots, suggesting grass-specific functions in reproductive tissues. Finally, the Fe-responsive expression profiles of several YSLs suggest roles in Fe homeostasis. PMID:21831857

Contrasting Fish Behavior in Artificial Seascapes with Implications for Resources Conservation

PubMed Central

Koeck, Barbara; Alós, Josep; Caro, Anthony; Neveu, Reda; Crec'hriou, Romain; Saragoni, Gilles; Lenfant, Philippe

2013-01-01

Artificial reefs are used by many fisheries managers as a tool to mitigate the impact of fisheries on coastal fish communities by providing new habitat for many exploited fish species. However, the comparison between the behavior of wild fish inhabiting either natural or artificial habitats has received less attention. Thus the spatio-temporal patterns of fish that establish their home range in one habitat or the other and their consequences of intra-population differentiation on life-history remain largely unexplored. We hypothesize that individuals with a preferred habitat (i.e. natural vs. artificial) can behave differently in terms of habitat use, with important consequences on population dynamics (e.g. life-history, mortality, and reproductive success). Therefore, using biotelemetry, 98 white seabream (Diplodus sargus) inhabiting either artificial or natural habitats were tagged and their behavior was monitored for up to eight months. Most white seabreams were highly resident either on natural or artificial reefs, with a preference for the shallow artificial reef subsets. Connectivity between artificial and natural reefs was limited for resident individuals due to great inter-habitat distances. The temporal behavioral patterns of white seabreams differed between artificial and natural reefs. Artificial-reef resident fish had a predominantly nocturnal diel pattern, whereas natural-reef resident fish showed a diurnal diel pattern. Differences in diel behavioral patterns of white seabream inhabiting artificial and natural reefs could be the expression of realized individual specialization resulting from differences in habitat configuration and resource availability between these two habitats. Artificial reefs have the potential to modify not only seascape connectivity but also the individual behavioral patterns of fishes. Future management plans of coastal areas and fisheries resources, including artificial reef implementation, should therefore consider the potential effect of habitat modification on fish behavior, which could have key implications on fish dynamics. PMID:23935978

Contrasting fish behavior in artificial seascapes with implications for resources conservation.

PubMed

Koeck, Barbara; Alós, Josep; Caro, Anthony; Neveu, Reda; Crec'hriou, Romain; Saragoni, Gilles; Lenfant, Philippe

2013-01-01

Artificial reefs are used by many fisheries managers as a tool to mitigate the impact of fisheries on coastal fish communities by providing new habitat for many exploited fish species. However, the comparison between the behavior of wild fish inhabiting either natural or artificial habitats has received less attention. Thus the spatio-temporal patterns of fish that establish their home range in one habitat or the other and their consequences of intra-population differentiation on life-history remain largely unexplored. We hypothesize that individuals with a preferred habitat (i.e. natural vs. artificial) can behave differently in terms of habitat use, with important consequences on population dynamics (e.g. life-history, mortality, and reproductive success). Therefore, using biotelemetry, 98 white seabream (Diplodus sargus) inhabiting either artificial or natural habitats were tagged and their behavior was monitored for up to eight months. Most white seabreams were highly resident either on natural or artificial reefs, with a preference for the shallow artificial reef subsets. Connectivity between artificial and natural reefs was limited for resident individuals due to great inter-habitat distances. The temporal behavioral patterns of white seabreams differed between artificial and natural reefs. Artificial-reef resident fish had a predominantly nocturnal diel pattern, whereas natural-reef resident fish showed a diurnal diel pattern. Differences in diel behavioral patterns of white seabream inhabiting artificial and natural reefs could be the expression of realized individual specialization resulting from differences in habitat configuration and resource availability between these two habitats. Artificial reefs have the potential to modify not only seascape connectivity but also the individual behavioral patterns of fishes. Future management plans of coastal areas and fisheries resources, including artificial reef implementation, should therefore consider the potential effect of habitat modification on fish behavior, which could have key implications on fish dynamics.

Spatial and diurnal below canopy evaporation in a desert vineyard: measurements and modeling

USDA-ARS?s Scientific Manuscript database

Evaporation from the soil surface (E) can be a significant source of water loss in arid areas. In sparsely vegetated systems, E is expected to be a function of soil, climate, irrigation regime, precipitation patterns, and plant canopy development, and will therefore change dynamically at both daily ...

Human prolactin - 24-hour pattern with increased release during sleep.

NASA Technical Reports Server (NTRS)

Sassin, J. F.; Weitzman, E. D.; Kapen, S.; Frantz, A. G.

1972-01-01

Human prolactin was measured in plasma by radioimmunoassay at 20-minute intervals for a 24-hour period in each of six normal adults, whose sleep-wake cycles were monitored polygraphically. A marked diurnal variation in plasma concentrations was demonstrated, with highest values during sleep. Periods of episodic release occurred throughout the 24 hours.

Diurnal patterns of photosynthesis and water relations for four orchard-grown pomegranate (Punica granatum L.) cultivars

USDA-ARS?s Scientific Manuscript database

Long-term drought, coupled with tighter regulations on limited water resources have caused growers to seek drought tolerant cultivars of common tree crops in California. Yet information on pomegranate physiology is lacking, even though it is grown throughout the world in various climates. The purpos...

Dynamics of photosynthetic photon flux density (PPFD) and estimates in coastal northern California

USDA-ARS?s Scientific Manuscript database

The seasonal trends and diurnal patterns of Photosynthetically Active Radiation (PAR) were investigated in the San Francisco Bay Area of Northern California from March through August in 2007 and 2008. During these periods, the daily values of PAR flux density (PFD), energy loading with PAR (PARE), a...

Riparian Plant Water Relations Along the North Fork Kings River, California

Treesearch

Janet L. Nachlinger; Stanley D. Smith; Roland J. Risser

1989-01-01

Plant water relations of five obligate riparian species were studied along California's North Fork Kings River. Diurnal stomatal conductance, transpiration, and xylem pressure potentials were measured throughout the 1986 growing season and in mid-season in 1987. Patterns were similar for all species although absolute values varied considerably. Maximum stomatal...

HYPOXIC EFFECT ON GROWTH OF PALEOMENETES VULGARIS LARVAE AND OTHER SPECIES: USING CONSTANT EXPOSURE DATA TO PREDICT CYCLIC EXPOSURE RESPONSE

EPA Science Inventory

First stage larval marsh grass shrimp, Palaemonetes vulgaris, were exposed to patterns of diurnal, semidiurnal, and constant hypoxia to evaluate effects on growth and to determine if there was a consistent relationship between exposures. A comparison of growth with cyclic exposur...

Children's Cortisol Patterns and the Quality of the Early Learning Environment

ERIC Educational Resources Information Center

Sajaniemi, Nina; Suhonen, Eira; Kontu, Elina; Rantanen, Pekka; Lindholm, Harri; Hyttinen, Sirpa; Hirvonen, Ari

2011-01-01

The aim of this study was to evaluate the influence of early educational quality on children's cortisol levels. It was hypothesised that the environmental stressors might load children's immature stress regulative systems thus affecting their diurnal cortisol levels. The study sample consisted of 146 preschool-aged children. Cortisol was measured…

Estimating greenhouse gas emissions from a waste lagoon

USDA-ARS?s Scientific Manuscript database

A cost-effective approach was used to investigate the relationship between emission of the greenhouse gases (GHG) CO2, CH4, and N2O and energy fluxes from a swine waste lagoon. Energy fluxes were calculated using the Penman method. The energy fluxes showed a diurnal pattern as expected of such flux...

Temporal, Spatial, and Diurnal Patterns in Avian Activity at the Shuttle Landing Facility, John F. Kennedy Space Center, Florida, USA

NASA Technical Reports Server (NTRS)

Larson, Vickie L.; Rowe, Sean P.; Breininger, David R.

1997-01-01

Spatial and temporal patterns in bird abundance within the five-mile airspace at the Shuttle Landing Facility (SLF) on John F. Kennedy Space Center (KSC), Florida, USA were investigated for purposes of quantifying Bird Aircraft Strike Hazards (BASH). The airspace is surrounded by the Merritt Island National Wildlife Refuge (MINWR) which provides habitat for approximately 331 resident and migratory bird species. Potential bird strike hazards were greatest around sunrise and sunset for most avian taxonomic groups, including wading birds, most raptors, pelicans, gulls/terns, shorebirds, and passerines. Turkey Vultures and Black Vultures were identified as a primary threat to aircraft operations and were represented in 33% of the samples. Diurnal vulture activity varied seasonally with the development of air thermals in the airspace surrounding the SLF. Variation in the presence and abundance of migratory species was shown for American Robins, swallows, and several species of shorebirds. Analyses of bird activities provides for planning of avionics operations during periods of low-dsk and allows for risk minimization measures during periods of high-risk.

Effects of urban density on carbon dioxide exchanges: Observations of dense urban, suburban and woodland areas of southern England.

PubMed

Ward, H C; Kotthaus, S; Grimmond, C S B; Bjorkegren, A; Wilkinson, M; Morrison, W T J; Evans, J G; Morison, J I L; Iamarino, M

2015-03-01

Anthropogenic and biogenic controls on the surface-atmosphere exchange of CO2 are explored for three different environments. Similarities are seen between suburban and woodland sites during summer, when photosynthesis and respiration determine the diurnal pattern of the CO2 flux. In winter, emissions from human activities dominate urban and suburban fluxes; building emissions increase during cold weather, while traffic is a major component of CO2 emissions all year round. Observed CO2 fluxes reflect diurnal traffic patterns (busy throughout the day (urban); rush-hour peaks (suburban)) and vary between working days and non-working days, except at the woodland site. Suburban vegetation offsets some anthropogenic emissions, but 24-h CO2 fluxes are usually positive even during summer. Observations are compared to estimated emissions from simple models and inventories. Annual CO2 exchanges are significantly different between sites, demonstrating the impacts of increasing urban density (and decreasing vegetation fraction) on the CO2 flux to the atmosphere. Copyright © 2015 The Authors. Published by Elsevier Ltd.. All rights reserved.

Black carbon at a roadside site in Beijing: Temporal variations and relationships with carbon monoxide and particle number size distribution

NASA Astrophysics Data System (ADS)

Song, Shaojie; Wu, Ye; Xu, Jiayu; Ohara, Toshimasa; Hasegawa, Shuichi; Li, Jiaqi; Yang, Liu; Hao, Jiming

2013-10-01

Black carbon (BC), carbon monoxide (CO), and particle number size distribution were measured near a major urban expressway of Beijing during summer and winter field campaigns in 2009. BC was also observed at urban and rural sites. The temporal variations of BC and its relationships with CO and particle number size distribution were analyzed. The average BC concentrations at the roadside site were 12.3 and 17.9 μg m-3 during the summer and winter campaigns, respectively. BC concentrations ranked in the order of roadside > urban > rural. A general diurnal pattern at all sites showed that the higher BC levels were observed at night. The diurnal pattern of summertime BC at the roadside site followed the variations of heavy-duty diesel vehicles (HDDVs). The increased proportion of HDDVs at night contributed to high ΔBC/ΔCO ratios. This study suggests that HDDVs are an important contributor to nighttime BC and particle number concentrations of both Aitken and accumulation modes near major roadways in Beijing, especially in summer.

Foraging Activity Pattern Is Shaped by Water Loss Rates in a Diurnal Desert Rodent.

PubMed

Levy, Ofir; Dayan, Tamar; Porter, Warren P; Kronfeld-Schor, Noga

2016-08-01

Although animals fine-tune their activity to avoid excess heat, we still lack a mechanistic understanding of such behaviors. As the global climate changes, such understanding is particularly important for projecting shifts in the activity patterns of populations and communities. We studied how foraging decisions vary with biotic and abiotic pressures. By tracking the foraging behavior of diurnal desert spiny mice in their natural habitat and estimating the energy and water costs and benefits of foraging, we asked how risk management and thermoregulatory requirements affect foraging decisions. We found that water requirements had the strongest effect on the observed foraging decisions. In their arid environment, mice often lose water while foraging for seeds and cease foraging even at high energetic returns when water loss is high. Mice also foraged more often when energy expenditure was high and for longer times under high seed densities and low predation risks. Gaining insight into both energy and water balance will be crucial to understanding the forces exerted by changing climatic conditions on animal energetics, behavior, and ecology.

Does the Clock Make the Poison? Circadian Variation in Response to Pesticides

PubMed Central

Hooven, Louisa A.; Sherman, Katherine A.; Butcher, Shawn; Giebultowicz, Jadwiga M.

2009-01-01

Background Circadian clocks govern daily physiological and molecular rhythms, and putative rhythms in expression of xenobiotic metabolizing (XM) genes have been described in both insects and mammals. Such rhythms could have important consequences for outcomes of chemical exposures at different times of day. To determine whether reported XM gene expression rhythms result in functional rhythms, we examined daily profiles of enzyme activity and dose responses to the pesticides propoxur, deltamethrin, fipronil, and malathion. Methodology/Principal Findings Published microarray expression data were examined for temporal patterns. Male Drosophila were collected for ethoxycoumarin-O-deethylase (ECOD), esterase, glutathione-S-transferase (GST), and, and uridine 5′-diphosphoglucosyltransferase (UGT) enzyme activity assays, or subjected to dose-response tests at four hour intervals throughout the day in both light/dark and constant light conditions. Peak expression of several XM genes cluster in late afternoon. Significant diurnal variation was observed in ECOD and UGT enzyme activity, however, no significant daily variation was observed in esterase or GST activity. Daily profiles of susceptibility to lethality after acute exposure to propoxur and fipronil showed significantly increased resistance in midday, while susceptibility to deltamethrin and malathion varied little. In constant light, which interferes with clock function, the daily variation in susceptibility to propoxur and in ECOD and UGT enzyme activity was depressed. Conclusions/Significance Expression and activities of specific XM enzymes fluctuate during the day, and for specific insecticides, the concentration resulting in 50% mortality varies significantly during the day. Time of day of chemical exposure should be an important consideration in experimental design, use of pesticides, and human risk assessment. PMID:19649249

IgE-dependent activation of human mast cells and fMLP-mediated activation of human eosinophils is controlled by the circadian clock.

PubMed

Baumann, Anja; Feilhauer, Katharina; Bischoff, Stephan C; Froy, Oren; Lorentz, Axel

2015-03-01

Symptoms of allergic attacks frequently exhibit diurnal variations. Accordingly, we could recently demonstrate that mast cells and eosinophils - known as major effector cells of allergic diseases - showed an intact circadian clock. Here, we analyzed the role of the circadian clock in the functionality of mast cells and eosinophils. Human intestinal mast cells (hiMC) were isolated from intestinal mucosa; human eosinophils were isolated from peripheral blood. HiMC and eosinophils were synchronized by dexamethasone before stimulation every 4h around the circadian cycle by FcɛRI crosslinking or fMLP, respectively. Signaling molecule activation was examined using Western blot, mRNA expression by real-time RT-PCR, and mediator release by multiplex analysis. CXCL8 and CCL2 were expressed and released in a circadian manner by both hiMC and eosinophils in response to activation. Moreover, phosphorylation of ERK1/2, known to be involved in activation of hiMC and eosinophils, showed circadian rhythms in both cell types. Interestingly, all clock genes hPer1, hPer2, hCry1, hBmal1, and hClock were expressed in a similar circadian pattern in activated and unstimulated cells indicating that the local clock controls hiMC and eosinophils and subsequently allergic reactions but not vice versa. Copyright © 2014 Elsevier Ltd. All rights reserved.

Network Discovery Pipeline Elucidates Conserved Time-of-Day–Specific cis-Regulatory Modules

PubMed Central

McEntee, Connor; Byer, Amanda; Trout, Jonathan D; Hazen, Samuel P; Shen, Rongkun; Priest, Henry D; Sullivan, Christopher M; Givan, Scott A; Yanovsky, Marcelo; Hong, Fangxin; Kay, Steve A; Chory, Joanne

2008-01-01

Correct daily phasing of transcription confers an adaptive advantage to almost all organisms, including higher plants. In this study, we describe a hypothesis-driven network discovery pipeline that identifies biologically relevant patterns in genome-scale data. To demonstrate its utility, we analyzed a comprehensive matrix of time courses interrogating the nuclear transcriptome of Arabidopsis thaliana plants grown under different thermocycles, photocycles, and circadian conditions. We show that 89% of Arabidopsis transcripts cycle in at least one condition and that most genes have peak expression at a particular time of day, which shifts depending on the environment. Thermocycles alone can drive at least half of all transcripts critical for synchronizing internal processes such as cell cycle and protein synthesis. We identified at least three distinct transcription modules controlling phase-specific expression, including a new midnight specific module, PBX/TBX/SBX. We validated the network discovery pipeline, as well as the midnight specific module, by demonstrating that the PBX element was sufficient to drive diurnal and circadian condition-dependent expression. Moreover, we show that the three transcription modules are conserved across Arabidopsis, poplar, and rice. These results confirm the complex interplay between thermocycles, photocycles, and the circadian clock on the daily transcription program, and provide a comprehensive view of the conserved genomic targets for a transcriptional network key to successful adaptation. PMID:18248097

Higher cortisol levels at diurnal trough predict greater attentional bias towards threat in healthy young adults.

PubMed

Hakamata, Yuko; Izawa, Shuhei; Sato, Eisuke; Komi, Shotaro; Murayama, Norio; Moriguchi, Yoshiya; Hanakawa, Takashi; Inoue, Yusuke; Tagaya, Hirokuni

2013-11-01

Attentional bias (AB), selective information processing towards threat, can exacerbate anxiety and depression. Despite growing interest, physiological determinants of AB are yet to be understood. We examined whether stress hormone cortisol and its diurnal variation pattern contribute to AB. Eighty-seven healthy young adults underwent assessments for AB, anxious personality traits, depressive symptoms, and attentional function. Salivary cortisol was collected at three time points daily (at awakening, 30 min after awakening, and bedtime) for 2 consecutive days. We performed: (1) multiple regression analysis to examine the relationships between AB and the other measures and (2) analysis of variance (ANOVA) between groups with different cortisol variation patterns for the other measures. Multiple regression analysis revealed that higher cortisol levels at bedtime (p<0.001), an anxious personality trait (p=0.011), and years of education (p=0.036) were included in the optimal model to predict AB (adjusted R(2)=0.234, p<0.001). ANOVA further demonstrated significant mean differences in AB and depressive symptoms; individuals with blunted cortisol variation exhibited significantly greater AB and depression than those with moderate variation (p=0.037 and p=0.009, respectively). Neuropsychological assessment focused on attention and cortisol measurement at three time points daily. We showed that higher cortisol levels at bedtime and blunted cortisol variation are associated with greater AB. Individuals who have higher cortisol levels at diurnal trough might be at risk of clinical anxiety or depression but could also derive more benefits from the attentional-bias-modification program. © 2013 Elsevier B.V. All rights reserved.

Dietary Intake, Eating Behaviors, and Diurnal Patterns of Salivary Cortisol and Alpha-Amylase Secretion Among Professional Young Adult Female Tennis Players.

PubMed

Filaire, Edith; Massart, Alain; Hua, Jiewen; Le Scanff, Christine

2015-06-01

The aims of study were to examine the eating behaviors among 26 professional female tennis players and to assess the diurnal patterns of stress hormones through the measurement of awakening and diurnal profiles of salivary alpha-amylase (sAA) and cortisol concentrations. Eating behaviors were assessed through three questionnaires (Eating Attitudes Test-26; Eating Disorders Inventory 2; and Body Shape Questionnaire), food intake by a 7-day diet record, and menstrual status by questionnaire. Perceived stress scale and anxiety state were also evaluated. Saliva samples were collected at awakening, 30 min, 60 min, and 12 hr post awakening after 6-days' rest. Forty-six percent of tennis players presented Disordered Eating attitudes (DE) (n = 12) with a lower body mass index, and higher state anxiety as compared with the group without DE. No differences in the Perceived Stress Scale scores were noted. Mean energy intake, protein and carbohydrates intakes were lower (p < .05) in the DE group as compared with the group without DE. Although in both groups, sAA concentrations presented a decrease in the first 30 min after awakening, and then progressively rose toward the afternoon, DE players exhibited reduced concentrations of the sAA with a decrease in its overall day secretion. Moreover, they showed a higher overall day secretion of salivary cortisol and a higher Cortisol Awakening Response. These results suggest that the activity of the sympathetic nervous system is impaired whereas the cortisol awakening response is enhanced. The long-term consequences of these modifications on health remain to be elucidated.

Light-induced diurnal pattern of methane exchange in a boreal forest

NASA Astrophysics Data System (ADS)

Sundqvist, Elin; Crill, Patrick; Mölder, Meelis; Vestin, Patrik; Lindroth, Anders

2013-04-01

Boreal forests represents one third of the Earth's forested land surface area and is a net sink of methane and an important component of the atmospheric methane budget. Methane is oxidized in well-aerated forest soils whereas ponds and bog soils are sources of methane. Besides the microbial processes in the soil also forest vegetation might contribute to methane exchange. Due to a recent finding of methane consumption by boreal plants that correlated with photosynthetic active radiation (PAR), we investigate the impact of PAR on soil methane exchange at vegetated plots on the forest floor. The study site, Norunda in central Sweden, is a 120 years old boreal forest stand, dominated by Scots pine and Norway spruce. We used continuous chamber measurements in combination with a high precision laser gas analyzer (Los Gatos Research), to measure the methane exchange at four different plots in July-November 2009, and April-June 2010. The ground vegetation consisted almost entirely of mosses and blueberry-shrubs. Two of the plots acted as stable sinks of methane whereas the other two plots shifted from sinks to sources during very wet periods. The preliminary results show a clear diurnal pattern of the methane exchange during the growing season, which cannot be explained by temperature. The highest consumption occurs at high PAR levels. The amplitude of the diurnal methane exchange during the growing season is in the order of 10 μmol m-2 h-1. This indicates that besides methane oxidation by methanotrophs in the soil there is an additional removal of methane at soil level by a process related to ground vegetation.

Salivary α-amylase and cortisol after exercise in menopause: influence of long-term HRT.

PubMed

Patacchioli, F R; Ghiciuc, C M; Bernardi, M; Dima-Cozma, L C; Fattorini, L; Squeo, M R; Galoppi, P; Brunelli, R; Ferrante, F; Pasquali, V; Perrone, G

2015-01-01

This observational prospective study analyzed the effect of an incremental cardiopulmonary exercise test (CPET) on the secretion of salivary biomarkers of the adrenergic nervous system and hypothalamus-pituitary-adrenal (HPA) axis activity by measuring salivary α-amylase and cortisol diurnal trajectories in the setting of long-term hormone replacement therapy (HRT). Fifteen healthy sedentary postmenopausal women who were current HRT users and 15 women who had never used HRT were consecutively recruited. α-Amylase and cortisol were measured in salivary samples collected on the CPET day and on a rest day. Cardiovascular and respiratory fitness parameters were recorded during the CPET challenge. The participants had very homogeneous somatic characteristics, and they were all in generally good health. The postmenopausal never-HRT users presented an abnormal diurnal pattern of α-amylase at baseline and a flattened response to CPET. In contrast, women on HRT had a physiological α-amylase diurnal pattern and increased salivary α-amylase production during the CPET-induced challenge. The CPET challenge physiologically activated the HPA axis activity, as shown by the increase in the concentration of salivary cortisol during the effort test. HPA axis activity was not affected by long-term HRT. Postmenopausal women using HRT exhibited a cardiorespiratory functional capacity that was significantly (p < 0.05) higher than that of non-users. Our findings show that healthy postmenopausal women present an asymmetry between adrenergic nervous system and HPA axis activities under both basal and stress conditions. HRT was able to modify the abnormal adrenergic nervous system activity, most likely by reducing the sympathetic hyperactivity that characterizes menopause.

Diurnal variation in the coupling of photosynthetic electron transport and carbon fixation in iron-limited phytoplankton in the NE subarctic Pacific

NASA Astrophysics Data System (ADS)

Schuback, N.; Flecken, M.; Maldonado, M. T.; Tortell, P. D.

2015-10-01

Active chlorophyll a fluorescence approaches, including fast repetition rate fluorometry (FRRF), have the potential to provide estimates of phytoplankton primary productivity at unprecedented spatial and temporal resolution. FRRF-derived productivity rates are based on estimates of charge separation at PSII (ETRRCII), which must be converted into ecologically relevant units of carbon fixation. Understanding sources of variability in the coupling of ETRRCII and carbon fixation provides physiological insight into phytoplankton photosynthesis, and is critical for the application of FRRF as a primary productivity measurement tool. In the present study, we simultaneously measured phytoplankton carbon fixation and ETRRCII in the iron-limited NE subarctic Pacific, over the course of a diurnal cycle. We show that rates of ETRRCII are closely tied to the diurnal cycle in light availability, whereas rates of carbon fixation appear to be influenced by endogenous changes in metabolic energy allocation under iron-limited conditions. Unsynchronized diurnal oscillations of the two rates led to 3.5 fold changes in the conversion factor coupling ETRRCII and carbon fixation (Φe:C / nPSII). Consequently, diurnal variability in phytoplankton carbon fixation cannot be adequately captured with FRRF approaches if a constant conversion factor is applied. Utilizing several auxiliary photophysiological measurements, we observed that a high conversion factor is associated with conditions of excess light, and correlates with the expression of non-photochemical quenching (NPQ) in the pigment antenna, as derived from FRRF measurements. The observed correlation between NPQ and the conversion factor Φe:C / nPSII has the potential to improve estimates of phytoplankton carbon fixation rates from FRRF measurements alone.

Diurnal variation in the coupling of photosynthetic electron transport and carbon fixation in iron-limited phytoplankton in the NE subarctic Pacific

NASA Astrophysics Data System (ADS)

Schuback, Nina; Flecken, Mirkko; Maldonado, Maria T.; Tortell, Philippe D.

2016-02-01

Active chlorophyll a fluorescence approaches, including fast repetition rate fluorometry (FRRF), have the potential to provide estimates of phytoplankton primary productivity at an unprecedented spatial and temporal resolution. FRRF-derived productivity rates are based on estimates of charge separation in reaction center II (ETRRCII), which must be converted into ecologically relevant units of carbon fixation. Understanding sources of variability in the coupling of ETRRCII and carbon fixation provides physiological insight into phytoplankton photosynthesis and is critical for the application of FRRF as a primary productivity measurement tool. In the present study, we simultaneously measured phytoplankton carbon fixation and ETRRCII in the iron-limited NE subarctic Pacific over the course of a diurnal cycle. We show that rates of ETRRCII are closely tied to the diurnal cycle in light availability, whereas rates of carbon fixation appear to be influenced by endogenous changes in metabolic energy allocation under iron-limited conditions. Unsynchronized diurnal oscillations of the two rates led to 3.5-fold changes in the conversion factor between ETRRCII and carbon fixation (Kc / nPSII). Consequently, diurnal variability in phytoplankton carbon fixation cannot be adequately captured with FRRF approaches if a constant conversion factor is applied. Utilizing several auxiliary photophysiological measurements, we observed that a high conversion factor is associated with conditions of excess light and correlates with the increased expression of non-photochemical quenching (NPQ) in the pigment antenna, as derived from FRRF measurements. The observed correlation between NPQ and Kc / nPSII requires further validation but has the potential to improve estimates of phytoplankton carbon fixation rates from FRRF measurements alone.

Biotic and abiotic controls on diurnal fluctuations in labile soil phosphorus of a wet tropical forest.

PubMed

Vandecar, Karen L; Lawrence, Deborah; Wood, Tana; Oberbauer, Steven F; Das, Rishiraj; Tully, Katherine; Schwendenmann, Luitgard

2009-09-01

The productivity of many tropical wet forests is generally limited by bioavailable phosphorus (P). Microbial activity is a key regulator of P availability in that it determines both the supply of P through organic matter decomposition and the depletion of bioavailable P through microbial uptake. Both microbial uptake and mineralization occur rapidly, and their net effect on P availability varies with soil moisture, temperature, and soil organic matter quantity and quality. Exploring the mechanisms driving P availability at fine temporal scales can provide insight into the coupling of carbon, water, and nutrient cycles, and ultimately, the response of tropical forests to climate change. Despite the recognized importance of P cycling to the dynamics of wet tropical forests and their potential sensitivity to short-term fluctuations in bioavailable P, the diurnal pattern of P remains poorly understood. This study quantifies diurnal fluctuations in labile soil P and evaluates the importance of biotic and abiotic factors in driving these patterns. To this end, measurements of labile P were made every other hour in a Costa Rican wet tropical forest oxisol. Spatial and temporal variation in Bray-extractable P were investigated in relation to ecosystem carbon flux, soil CO2 efflux, soil moisture, soil temperature, solar radiation, and sap-flow velocity. Spatially averaged bi-hourly (every two hours) labile P ranged from 0.88 to 2.48 microg/g across days. The amplitude in labile P throughout the day was 0.61-0.82 microg/g (41-54% of mean P concentrations) and was characterized by a bimodal pattern with a decrease at midday. Labile P increased with soil CO2 efflux and soil temperature and declined with increasing sap flow and solar radiation. Together, soil CO2 efflux, soil temperature, and sap flow explained 86% of variation in labile P.

[Leaf water potential of spring wheat and field pea under different tillage patterns and its relationships with environmental factors].

PubMed

Zhang, Ming; Zhang, Ren-Zhi; Cai, Li-Qun

2008-07-01

Based on a long-term experiment, the leaf water potential of spring wheat and field pea, its relationships with environmental factors, and the diurnal variations of leaf relative water content and water saturation deficient under different tillage patterns were studied. The results showed that during whole growth period, field pea had an obviously higher leaf water potential than spring wheat, but the two crops had similar diurnal variation trend of their leaf water potential, i.e., the highest in early morning, followed by a descent, and a gradual ascent after the descent. For spring wheat, the maximum leaf water potential appeared at its jointing and heading stages, followed by at booting and flowering stages, and the minimum appeared at filling stage. For field pea, the maximum leaf water potential achieved at squaring stage, followed by at branching and flowering stages, and the minimum was at podding stage. The leaf relative water content of spring wheat was the highest at heading stage, followed by at jointing and flowering stages, and achieved the minimum at filling stage; while the water saturation deficient was just in adverse. With the growth of field pea, its leaf relative water content decreased, but leaf water saturation deficient increased. The leaf water potential of both spring wheat and field pea had significant correlations with environmental factors, including soil water content, air temperature, solar radiation, relative air humidity, and air water potential. Path analysis showed that the meteorological factor which had the strongest effect on the diurnal variation of spring wheat' s and field pea' s leaf water potential was air water potential and air temperature, respectively. Compared with conventional tillage, the protective tillage patterns no-till, no-till plus straw mulching, and conventional tillage plus straw returning increased the leaf water potential and relative water content of test crops, and the effect of no-till plus straw mulching was most significant.

Temporal distribution and potential sources of atmospheric mercury measured at a high-elevation background station in Taiwan

NASA Astrophysics Data System (ADS)

Sheu, Guey-Rong; Lin, Neng-Huei; Wang, Jia-Lin; Lee, Chung-Te; Ou Yang, Chang-Feng; Wang, Sheng-Hsiang

2010-07-01

Measurements of gaseous elemental mercury (GEM), reactive gaseous mercury (RGM), and particulate mercury (PHg) have been conducted at Lulin Atmospheric Background Station (LABS) in Taiwan since April 2006. This was the first long-term free tropospheric atmospheric Hg monitoring program in the downwind region of East Asia, which is a major Hg emission source region. Between April 13, 2006 and December 31, 2007, the mean concentrations of GEM, RGM, and PHg were 1.73 ng m -3, 12.1 pg m -3, and 2.3 pg m -3, respectively. A diurnal pattern was observed for GEM with afternoon peaks and nighttime lows, whereas the diurnal pattern of RGM was opposite to that of GEM. Spikes of RGM were frequently observed between midnight and early morning with concurrent decreases in GEM and relative humidity and increases in O 3, suggesting the oxidation of GEM and formation of RGM in free troposphere (FT). Upslope movement of boundary layer (BL) air in daytime and subsidence of FT air at night resulted in these diurnal patterns. Considering only the nighttime data, which were more representative of FT air, the composite monthly mean GEM concentrations ranged between 1.06 and 2.06 ng m -3. Seasonal variation in nighttime GEM was evident, with lower concentrations usually occurring in summer when clean marine air masses prevailed. Between fall and spring, air masses passed the East Asian continent prior to reaching LABS, contributing to the elevated GEM concentrations. Analysis of GEM/CO correlation tends to support the argument. Good GEM/CO correlations were observed in fall, winter, and spring, suggesting influence of anthropogenic emission sources. Our results demonstrate the significance of East Asian Hg emissions, including both anthropogenic and biomass burning emissions, and their long-range transport in the FT. Because of the pronounced seasonal monsoon activity and the seasonal variation in regional wind field, export of the Asian Hg emissions to Taiwan occurs mainly during fall, winter, and spring.

Brown Norway and Zucker Lean Rats Demonstrate Circadian Variation in Ventilation and Sleep Apnea

PubMed Central

Fink, Anne M.; Topchiy, Irina; Ragozzino, Michael; Amodeo, Dionisio A.; Waxman, Jonathan A.; Radulovacki, Miodrag G.; Carley, David W.

2014-01-01

Study Objectives: Circadian rhythms influence many biological systems, but there is limited information about circadian and diurnal variation in sleep related breathing disorder. We examined circadian and diurnal patterns in sleep apnea and ventilatory patterns in two rat strains, one with high sleep apnea propensity (Brown Norway [BN]) and the other with low sleep apnea propensity (Zucker Lean [ZL]). Design/Setting: Chronically instrumented rats were randomized to breathe room air (control) or 100% oxygen (hyperoxia), and we performed 20-h polysomnography beginning at Zeitgeber time 4 (ZT 4; ZT 0 = lights on, ZT12 = lights off). We examined the effect of strain and inspired gas (twoway analysis of variance) and analyzed circadian and diurnal variability. Measurements and Results: Strain and inspired gas-dependent differences in apnea index (AI; apneas/h) were particularly prominent during the light phase. AI in BN rats (control, 16.9 ± 0.9; hyperoxia, 34.0 ± 5.8) was greater than in ZL rats (control, 8.5 ± 1.0; hyperoxia, 15.4 ± 1.1, [strain effect, P < 0.001; gas effect, P = 0.001]). Hyperoxia reduced respiratory frequency in both strains, and all respiratory pattern variables demonstrated circadian variability. BN rats exposed to hyperoxia demonstrated the largest circadian fluctuation in AI (amplitude = 17.9 ± 3.7 apneas/h [strain effect, P = 0.01; gas effect, P < 0.001; interaction, P = 0.02]; acrophase = 13.9 ± 0.7 h; r2 = 0.8 ± 1.4). Conclusions: Inherited, environmental, and circadian factors all are important elements of underlying sleep related breathing disorder. Our method to examine sleep related breathing disorder phenotypes in rats may have implications for understanding vulnerability for sleep related breathing disorder in humans. Citation: Fink AM; Topchiy I; Ragozzino M; Amodeo DA; Waxman JA; Radulovacki MG; Carley DW. Brown Norway and Zucker Lean rats demonstrate circadian variation in ventilation and sleep apnea. SLEEP 2014;37(4):715-721. PMID:24899760

Short communication: Using diurnal patterns of (13)C enrichment of CO2 to evaluate the effects of nitrate and docosahexaenoic acid on fiber degradation in the rumen of lactating dairy cows.

PubMed

Klop, G; Bannink, A; Dieho, K; Gerrits, W J J; Dijkstra, J

2016-09-01

Nitrate decreases enteric CH4 production in ruminants, but may also negatively affect fiber degradation. In this experiment, 28 lactating Holstein dairy cows were grouped into 7 blocks. Within blocks, cows were randomly assigned to 1 of 4 isonitrogenous treatments in a 2×2 factorial arrangement: control (CON); NO3 [21g of nitrate/kg of dry matter (DM)]; DHA [3g of docosahexaenoic acid (DHA)/kg of DM]; or NO3+DHA (21g of nitrate/kg of DM and 3g of DHA/kg of DM). Cows were fed a total mixed ration consisting of 21% grass silage, 49% corn silage, and 30% concentrates on a DM basis. Based on the difference in natural (13)C enrichment and neutral detergent fiber and starch content between grass silage and corn silage, we investigated whether a negative effect on rumen fiber degradation could be detected by evaluating diurnal patterns of (13)C enrichment of exhaled carbon dioxide. A significant nitrate × DHA interaction was found for neutral detergent fiber digestibility, which was reduced on the NO3 treatment to an average of 55%, as compared with 61, 64, and 65% on treatments CON, DHA, and NO3+DHA, respectively. Feeding nitrate, but not DHA, resulted in a pronounced increase in (13)C enrichment of CO2 in the first 3 to 4 h after feeding only. Results support the hypothesis that effects of a feed additive on the rate of fiber degradation in the rumen can be detected by evaluating diurnal patterns of (13)C enrichment of CO2. To be able to detect this, the main ration components have to differ considerably in fiber and nonfiber carbohydrate content as well as in natural (13)C enrichment. Copyright © 2016 American Dairy Science Association. Published by Elsevier Inc. All rights reserved.

Physical models for the normal YORP and diurnal Yarkovsky effects

NASA Astrophysics Data System (ADS)

Golubov, O.; Kravets, Y.; Krugly, Yu. N.; Scheeres, D. J.

2016-06-01

We propose an analytic model for the normal Yarkovsky-O'Keefe-Radzievskii-Paddack (YORP) and diurnal Yarkovsky effects experienced by a convex asteroid. Both the YORP torque and the Yarkovsky force are expressed as integrals of a universal function over the surface of an asteroid. Although in general this function can only be calculated numerically from the solution of the heat conductivity equation, approximate solutions can be obtained in quadratures for important limiting cases. We consider three such simplified models: Rubincam's approximation (zero heat conductivity), low thermal inertia limit (including the next order correction and thus valid for small heat conductivity), and high thermal inertia limit (valid for large heat conductivity). All three simplified models are compared with the exact solution.

Describing temporal variation in reticuloruminal pH using continuous monitoring data.

PubMed

Denwood, M J; Kleen, J L; Jensen, D B; Jonsson, N N

2018-01-01

Reticuloruminal pH has been linked to subclinical disease in dairy cattle, leading to considerable interest in identifying pH observations below a given threshold. The relatively recent availability of continuously monitored data from pH boluses gives new opportunities for characterizing the normal patterns of pH over time and distinguishing these from abnormal patterns using more sensitive and specific methods than simple thresholds. We fitted a series of statistical models to continuously monitored data from 93 animals on 13 farms to characterize normal variation within and between animals. We used a subset of the data to relate deviations from the normal pattern to the productivity of 24 dairy cows from a single herd. Our findings show substantial variation in pH characteristics between animals, although animals within the same farm tended to show more consistent patterns. There was strong evidence for a predictable diurnal variation in all animals, and up to 70% of the observed variation in pH could be explained using a simple statistical model. For the 24 animals with available production information, there was also a strong association between productivity (as measured by both milk yield and dry matter intake) and deviations from the expected diurnal pattern of pH 2 d before the productivity observation. In contrast, there was no association between productivity and the occurrence of observations below a threshold pH. We conclude that statistical models can be used to account for a substantial proportion of the observed variability in pH and that future work with continuously monitored pH data should focus on deviations from a predictable pattern rather than the frequency of observations below an arbitrary pH threshold. Copyright © 2018 American Dairy Science Association. Published by Elsevier Inc. All rights reserved.

Tower Based Measurements of Bio-indicators Over the Growing Season at a Mature Douglas-fir Coniferous Forest

NASA Astrophysics Data System (ADS)

Cheng, Y.; Hilker, T.; Middleton, E. M.; Coops, N. C.; Black, T. A.; Krishnan, P.

2007-12-01

The use of remotely sensed measurements collected by satellite, aircraft, and ground instruments to improve our understanding of ecological and hydrological processes were successfully demonstrated through the First International Satellite Land Surface Climatology (ISLSCP) Field Experiment [FIFE] and the BOReal Ecosystem- Atmosphere Study [BOREAS]. Following the concept of FIFE and BOREAS, we analyzed hyperspectral reflectance measurements collected at a coastal forest in British Columbia, Canada through the 2006 growing season. Diurnal and seasonal dynamics of the Photochemical Reflectance Index (PRI), a normalized difference spectral band-ratio index based on the xanthophyll signal at 531 nm which expresses protective responses to high light stress, were studied. This index has been shown to correlate with photosynthetic light use efficiency (LUE), an essential variable to model carbon uptake efficiency by plants. The measurements were collected from an automated system mounted on a flux tower under different sun and view geometries and atmospheric conditions through the 2006 growing season. Canopy structure was modeled using Light Detection and Ranging (LiDAR) technology, from which the sunlit and shaded canopy fractions were calculated as a function of incoming photosynthetically active radiation (PAR). These automated directional observations allowed us to: 1) investigate diurnal and seasonal changes of the PRI under different sky conditions; 2) compare the PRI with tower-based micro-meteorological measurements; and 3) separately investigate the PRI dynamics for sunlit and shaded partitions of the canopy which differ in response to their light environments. The data were categorized into six different groups based on two sky conditions (sunny and cloudy) and three illumination conditions (sunlit, shaded and intermediate). PRI showed a clear correlation with the LiDAR-based shadow fraction estimates. In April, the commencement of the growing season, clear diurnal dynamics of the PRI were observed for the sunlit foliage subset which showed lower (more negative) PRI values and a more dramatic change with sun altitude than shaded leaves. This was expected since leaves exposed to direct sunlight in their natural environment are likely under higher light stress. Consequently, diurnal changes of PRI and the differences among foliage groups were less obvious on overcast days because of limited direct irradiance. In August, when water availability was at its lowest of the year, the PRI exhibited relatively constant values throughout the day but with clear distinguishable values among the three leaf groups on sunny days. For other tower based measurements, PAR and GEP both showed clear seasonal patterns. Better estimates of the actual PAR intensity illuminating the sunlit and shaded canopy fractions were retrieved using the shadow fraction to reduce the above-canopy PAR. A clear seasonal pattern emerged for this revised PAR that distinguished among the groups and was also used to estimate LUE for the leaf groups. The correlation between PRI and LUE was confirmed. From these results, better understandings of the dynamics of carbon exchange bio-indicators that can be derived from directional hyperspectral reflectance measurements were demonstrated. Keywords: PRI, photosynthesis, PAR, GEP, LUE

Diurnal warming in shallow coastal seas: Observations from the Caribbean and Great Barrier Reef regions

NASA Astrophysics Data System (ADS)

Zhu, X.; Minnett, P. J.; Berkelmans, R.; Hendee, J.; Manfrino, C.

2014-07-01

A good understanding of diurnal warming in the upper ocean is important for the validation of satellite-derived sea surface temperature (SST) against in-situ buoy data and for merging satellite SSTs taken at different times of the same day. For shallow coastal regions, better understanding of diurnal heating could also help improve monitoring and prediction of ecosystem health, such as coral reef bleaching. Compared to its open ocean counterpart which has been studied extensively and modeled with good success, coastal diurnal warming has complicating localized characteristics, including coastline geometry, bathymetry, water types, tidal and wave mixing. Our goal is to characterize coastal diurnal warming using two extensive in-situ temperature and weather datasets from the Caribbean and Great Barrier Reef (GBR), Australia. Results showed clear daily warming patterns in most stations from both datasets. For the three Caribbean stations where solar radiation is the main cause of daily warming, the mean diurnal warming amplitudes were about 0.4 K at depths of 4-7 m and 0.6-0.7 K at shallower depths of 1-2 m; the largest warming value was 2.1 K. For coral top temperatures of the GBR, 20% of days had warming amplitudes >1 K, with the largest >4 K. The bottom warming at shallower sites has higher daily maximum temperatures and lower daily minimum temperatures than deeper sites nearby. The averaged daily warming amplitudes were shown to be closely related to daily average wind speed and maximum insolation, as found in the open ocean. Diurnal heating also depends on local features including water depth, location on different sections of the reef (reef flat vs. reef slope), the relative distance from the barrier reef chain (coast vs. lagoon stations vs. inner barrier reef sites vs. outer rim sites); and the proximity to the tidal inlets. In addition, the influence of tides on daily temperature changes and its relative importance compared to solar radiation was quantified by calculating the ratio of power spectrum densities at the principal lunar semidiurnal M2 tide versus 24-hour cycle frequency representing mainly solar radiation forcing, i.e., (PSDM2/PSD24). Despite the fact that GBR stations are generally located at regions with large tidal changes, the tidal effects were modest: 80% of stations showed value of (PSDM2/PSD24) of less than 10%.

Thermal biology, torpor use and activity patterns of a small diurnal marsupial from a tropical desert: sexual differences.

PubMed

Körtner, Gerhard; Rojas, A Daniella; Geiser, Fritz

2010-08-01

Many small desert dasyurids employ torpor almost daily during winter, because cold nights and low food availability impose high energetic costs. However, in Western Australia the arid zone extends into tropical, coastal regions, where winter temperature conditions are far less severe. We studied the thermal biology and activity patterns of free-ranging kaluta (approximately 27 g), a dasyurid restricted to these tropical spinifex deserts, during the Austral winter (June-July) and in addition quantified activity patterns in captivity. Unlike most dasyurids, wild and captive kalutas were almost exclusively diurnal and retreated into underground burrows during the night. Despite being active during the warmer part of the day, kalutas entered torpor daily. However, torpor patterns differed remarkably between males and females. While females spent most of the night torpid at body temperatures (T (b)) as low as 21 degrees C, close to soil temperature, males entered multiple short and shallow bouts (T (b) > 25 degrees C) during the night. Males also maintained higher T (b)s during the early morning when active, occupied larger home ranges and covered greater distances while foraging than females. Hence, males appear to expend more energy than the similar-sized females both while foraging and during the rest phase. We propose that physiological as well as behavioural preparations for the September mating season that culminate in a complete male die-off might already impose energetic costs on males during winter.

Electronic diary evidence on energy erosion in clinical burnout.

PubMed

Sonnenschein, Mieke; Sorbi, Marjolijn J; van Doornen, Lorenz J P; Schaufeli, Wilmar B; Maas, Cora J M

2007-10-01

Burnout is generally defined as a state of severe exhaustion. So far, research has predominantly focused on relatively mild burnout in employees able to work despite their complaints. This study examines energy depletion in clinical burnout (e.g., the severest cases on extended sick leave) by comparing the diurnal patterns of fatigue and exhaustion with those of healthy individuals. Sixty clinically burned-out and 40 healthy participants kept an electronic diary for 14 days, 7 times a day, yielding a total of 8,116 diary entries. This study shows that burned-out individuals typically suffer continuously from a severe fatigue throughout the day. The resulting flattened diurnal cycles mark a stable exhaustion that is uncommon in healthy persons. The current results provide novel support for the existence of severe energy erosion in clinical burnout.

Singing activity-driven Arc expression associated with vocal acoustic plasticity in juvenile songbird.

PubMed

Hayase, Shin; Wada, Kazuhiro

2018-06-23

Learned vocalization, including birdsong and human speech, is acquired through self-motivated vocal practice during the sensitive period of vocal learning. The zebra finch (Taeniopygia guttata) develops a song characterized by vocal variability and crystalizes a defined song pattern as adulthood. However, it remains unknown how vocal variability is regulated with diurnal singing during the sensorimotor learning period. Here, we investigated the expression of activity-dependent neuroplasticity-related gene Arc during the early plastic song phase to examine its potential association with vocal plasticity. We first confirmed that multiple acoustic features of syllables in the plastic song were dramatically and simultaneously modulated during the first 3 hours of singing in a day and the altered features were maintained until sleep. Concurrently, Arc was intensely induced during morning singing and a subsequent attenuation during afternoon singing in the robust nucleus of the arcopallium (RA) and the interfacial nucleus of the nidopallium (NIf). The singing-driven Arc expression was not altered by circadian rhythm, but rather reduced during the day as juveniles produced more songs. Song stabilization accelerated by testosterone administration in juveniles was accompanied with attenuation of Arc induction in RA and NIf. In contrast, although early-deafened birds produced highly unstable song even at adulthood, singing-driven Arc expression was not different between intact and early-deafened adults. These results suggest a potential functional link between Arc expression in RA and NIf and vocal plasticity during the sensorimotor phase of song learning. Nonetheless, Arc expression did not reflect the quality of bird's own song or auditory feedback. This article is protected by copyright. All rights reserved. This article is protected by copyright. All rights reserved.

Global analysis of gene expression in maize leaves treated with low temperature. II. Combined effect of severe cold (8 °C) and circadian rhythm.

PubMed

Jończyk, M; Sobkowiak, A; Trzcinska-Danielewicz, J; Skoneczny, M; Solecka, D; Fronk, J; Sowiński, P

2017-10-01

In maize seedlings, severe cold results in dysregulation of circadian pattern of gene expression causing profound modulation of transcription of genes related to photosynthesis and other key biological processes. Plants live highly cyclic life and their response to environmental stresses must allow for underlying biological rhythms. To study the interplay of a stress and a rhythmic cue we investigated transcriptomic response of maize seedlings to low temperature in the context of diurnal gene expression. Severe cold stress had pronounced effect on the circadian rhythm of a substantial proportion of genes. Their response was strikingly dual, comprising either flattening (partial or complete) of the diel amplitude or delay of expression maximum/minimum by several hours. Genes encoding central oscillator components behaved in the same dual manner, unlike their Arabidopsis counterparts reported earlier to cease cycling altogether upon cold treatment. Also numerous genes lacking circadian rhythm responded to the cold by undergoing up- or down-regulation. Notably, the transcriptome changes preceded major physiological manifestations of cold stress. In silico analysis of metabolic processes likely affected by observed gene expression changes indicated major down-regulation of photosynthesis, profound and multifarious modulation of plant hormone levels, and of chromatin structure, transcription, and translation. A role of trehalose and stachyose in cold stress signaling was also suggested. Meta-analysis of published transcriptomic data allowed discrimination between general stress response of maize and that unique to severe cold. Several cis- and trans-factors likely involved in the latter were predicted, albeit none of them seemed to have a major role. These results underscore a key role of modulation of diel gene expression in maize response to severe cold and the unique character of the cold-response of the maize circadian clock.

The impact of an extreme case of irrigation on the southeastern United States climate

NASA Astrophysics Data System (ADS)

Selman, Christopher; Misra, Vasubandhu

2017-02-01

The impacts of irrigation on southeast United States diurnal climate are investigated using simulations from a regional climate model. An extreme case is assumed, wherein irrigation is set to 100 % of field capacity over the growing season of May through October. Irrigation is applied to the root zone layers of 10-40 and 40-100 cm soil layers only. It is found that in this regime there is a pronounced decrease in monthly averaged temperatures in irrigated regions across all months. In non-irrigated areas a slight warming is simulated. Diurnal maximum temperatures in irrigated areas warm, while diurnal minimum temperatures cool. The daytime warming is attributed to an increase in shortwave flux at the surface owing to diminished low cloud cover. Nighttime and daily mean cooling result as a consequence repartitioning of energy into latent heat flux over sensible heat flux, and of a higher net downward ground heat flux. Excess heat is transported into the deep soil layer, preventing a rapidly intensifying positive feedback loop. Both diurnal and monthly average precipitations are reduced over irrigated areas at a magnitude and spatial pattern similar to one another. Due to the excess moisture availability, evaporation is seen to increase, but this is nearly balanced by a corresponding reduction in sensible heat flux. Concomitant with additional moisture availability is an increase in both transient and stationary moisture flux convergences. However, despite the increase, there is a large-scale stabilization of the atmosphere stemming from a cooled surface.

The Role of Gravity Waves in Modulating Atmospheric Tides

NASA Technical Reports Server (NTRS)

Mayr, H. G.; Mengel, J. G; Chan, K. L.; Porter, H. S.

1999-01-01

We discuss results for the diurnal and semidiurnal tides obtained from our 3-D, time dependent numerical spectral model (NMS), extending from the ground up into the thermosphere, which incorporates Hines' Doppler spread parameterization of small scale gravity waves (GW). In the DSP, GW momentum (and energy) are conserved as the waves modulate the background flow and are filtered by the flow.As a consequence, the GW interaction tightly couples the dynamic components of the middle atmosphere with strong non-linear interactions between mean zonal circulation, tides and planetary waves to produce complicated patterns of variability much like those observed. The major conclusions are: (1) Since GW momentum is deposited in the altitude regime of increasing winds, the amplitude of the diurnal tide is amplified and its vertical wavelength is reduced at altitudes between 80 and 120 km. Wave filtering by the mean zonal circulation (with peak velocities during solstice) causes the GW flux to peak during equinox, and this produces a large semi-annual variation in the tide that has been observed on UARS. (2) Without the diurnal tide, the semidiurnal tide would also be modulated in this way. But the diurnal tide filters out the GW preferentially during equinox, so that the semidiurnal tide, at higher altitudes, tends to peak during solstice. (3) Under the influence of GW, the tides are modulated also significantly by planetary waves, with periods between 2 and 30 days, which are generated preferentially during solstice in part due to baroclinic instability.

Statistical problems in measuring surface ozone and modelling its patterns

NASA Astrophysics Data System (ADS)

Hutchison, Paul Stewart

The Thesis examines ground level air pollution data supplied by ITE Bush, Penicuik, Midlothian, Scotland. There is a brief examination of sulphur dioxide concentration data, but the Thesis is primarily concerned with ozone. The diurnal behaviour of ozone is the major topic, and a new methodology of classification of 'ozone days' is introduced and discussed. In chapter 2, the inverse Gaussian distribution is considered and rejected as a possible alternative to the standard approach of using the lognormal as a model for the frequency distribution of observed sulphur dioxide concentrations. In chapter 3, the behaviour of digital gas pollution analysers is investigated by making use of data obtained from two such machines operating side by side. A time series model of the differences between the readings obtained from the two machines is considered, and possible effects on modelling discussed. In chapter 4, the changes in the diurnal behaviour of ozone over a year are examined. A new approach involving a distortion of the time axis is shown to give diurnal ozone curves more homogeneous properties and have beneficial effects for modelling purposes. Chapter 5 extends the analysis of the diurnal behaviour of ozone begun in chapter 4 by considering individual 'ozone days' and attempting to classify them as one of several typical 'types' of day. The time distortion method introduced in chapter 4 is used, and a new classification methodology is introduced for considering data of this type. The statistical properties of this method are discussed in chapter 6.

[Diurnal variations of grassland evapotranspiration over different periods in the Pailugou basin in the upper reach of the Heihe River, Northwest China.

PubMed

Wang, Zhong Fu; Zhang, Lan Hui; Wang, Yi Bo; He, Chan Sheng

2016-11-18

Evapotranspiration (ET) is an important component of water cycle, but its measurement in high altitude mountainous region is quite difficult, resulting in the poor understanding of the temporal and spatial variations of actual ET in high altitude mountainous region. In this paper, a weighing lysimeter was used to measure the hourly ET in a grassland in the Pailugou basin in the upper reach of the Heihe River, Northwest China. Based on the measured data, diurnal variations of grassland ET over different periods were analyzed. Results indicated that snow and ice sublimation appeared during the freezing period, with a very different diurnal variation pattern compared with other three periods. During the period without sunshine, the amount of snow and ice sublimation was nearly constant. When the highest global radiation and lowest relative humidity appeared in the same period, the amount of snow and ice sublimation increased a little. The early growth period was a period when snow and ice started to melt, during which snowmelt evaporation and soil evaporation occurred at the same time. The growth period had the highest ET rate. Due to continuous rainfall events, maximum and minimum ET values appeared at the same hour. ET in the late growth period mainly came from soil evaporation, producing 3 peaks in diurnal variation, which was different from only one peak in both the early growth period and the growth period.

Sessional, Weekly and Diurnal Patterns of Computer Lab Usage by Students Attending a Regional University in Australia

ERIC Educational Resources Information Center

Spennemann, Dirk H. R.; Atkinson, John; Cornforth, David

2007-01-01

Most universities have invested in extensive infrastructure in the form of computer laboratories and computer kiosks. However, is this investment justified when it is suggested that students work predominantly from home using their own computers? This paper provides an empirical study investigating how students at a regional multi-campus…

Diurnal patterns in flight activity and effects of light on host finding behavior of the Asian citrus psyllid

USDA-ARS?s Scientific Manuscript database

The Asian citrus psyllid (ACP), Diaphorina citri (Hemiptera: Psyllidae), is an invasive pest of citrus in the United States. The psyllid feeds and reproduces primarily on new flush growth of citrus and other rutaceous plants. Because it vectors the bacterial causal agents of the deadly citrus green...

Hypothalamic-Ptuitary-Adrenal (HPA) Axis Activity in Adults with Intellectual Disabilities: A Preliminary Investigation

ERIC Educational Resources Information Center

Presland, A. D.; Clare, I. C. H.; Broughton, S.; Luke, L.; Wheeler, E.; Fairchild, G.; Watson, P. C.; Chan, W. Y. S.; Kearns, A.; Ring, H. A.

2013-01-01

Background: Cortisol is a marker of physiological arousal, exhibiting a characteristic pattern of diurnal activity. The daily cortisol profile has been examined extensively and is atypical in a number of clinical disorders. However, there are very few studies focussing on the cortisol profile in adults with intellectual disabilities (ID). This…

Diurnal variations in metal concentrations in the Alamosa River and Wightman Fork, southwestern Colorado, 1995-97

USGS Publications Warehouse

Ortiz, Roderick F.; Stogner, Sr., Robert W.

2001-01-01

A comprehensive sampling network was implemented in the Alamosa River Basin from 1995 to 1997 to address data gaps identified as part of the ecological risk assessment of the Summitville Superfund site. Aluminum, copper, iron, and zinc were identified as the constituents of concern for the risk assessment. Water-quality samples were collected at six sites on the Alamosa River and Wightman Fork by automatic samplers. Several discrete (instantaneous) samples were collected over 24 hours at each site during periods of high diurnal variations in streamflow (May through September). The discrete samples were analyzed individually and duplicate samples were composited to produce a single sample that represented the daily-mean concentration. The diurnal variations in concentration with respect to the theoretical daily-mean concentration (maximum minus minimum divided by daily mean) are presented. Diurnal metal concentrations were highly variable in the Alamosa River and Wightman Fork. The concentration of a metal at a single site could change by several hundred percent during one diurnal cycle. The largest percent change in metal concentrations was observed for aluminum and iron. Zinc concentrations varied the least of the four metals. No discernible or predictable pattern was indicated in the timing of the daily mean, maximum, or minimum concentrations. The percentage of discrete sample concentrations that varied from the daily-mean concentration by thresholds of plus or minus 10, 25, and 50 percent was evaluated. Between 50 and 75 percent of discrete-sample concentrations varied from the daily-mean concentration by more than plus or minus 10 percent. The percentage of samples exceeding given thresholds generally was smaller during the summer period than the snowmelt period. Sampling strategies are critical to accurately define variability in constituent concentration, and conversely, understanding constituent variability is important in determining appropriate sampling strategies. During nonsteady-state periods, considerable errors in estimates of daily-mean concentration are possible if based on one discrete sample. Flow-weighting multiple discrete samples collected over a diurnal cycle provides a better estimate of daily-mean concentrations during nonsteady-state periods.

Propagation of Intra-Seasonal Tropical Oscillations (PISTON)

NASA Astrophysics Data System (ADS)

Moum, J. N.

2017-12-01

During monsoon season over the South China Sea and Philippines, weather varies on the subseasonal time scale. Disturbances of the "boreal summer intraseasonal oscillation" (BSISO) move north and east across the region over periods of weeks. These disturbances are strongly conditioned by the complex geography of the region. The diurnal cycle in convection over islands and adjacent coastal seas is strong. Air-sea interaction is modulated by ocean stratification and local circulation patterns that are themselves complex and diurnally varying. The multiple pathways and space-time scales in the regional ocean-atmosphere-land system make prediction on subseasonal to seasonal time scales challenging. The PISTON field campaign targets the west coast of Luzon in August/September 2018. It includes ship-based, moored and land-based measurements, a significant modeling effort and coordinates with the Philippine SALICA program (Sea Air Land Interactions in the Context of Archipelagos) and the aircraft-based, NASA-funded CAMP2EX campaign (Cloud and Aerosol Monsoonal Processes-Philippines Experiment). The diurnal cycle and its interaction with the BSISO are primary targets for PISTON. Key questions are: how heat is stored and released in the upper ocean on intraseasonal time scales; how that heat storage interacts with atmospheric convection; and what role it plays in BSISO maintenance and propagation. Key processes include land-sea breezes, orographic influence on convection, river discharge to coastal oceans, gravity waves, diurnal warm layers, internal tides, and a buoyancy-driven northward coastal current. As intraseasonal disturbances approach the region, the presence of islands, with their low surface heat capacity, mountains, inhomogeneous distribution of urban/vegetation/soil, and strong diurnal cycle disrupts the air-sea heat exchange that sustains the BSISO over the ocean, confounding prediction models in which these processes are inadequately represented. Along with upscale influences, PISTON seeks to advance our understanding of how large scale atmospheric circulation variability over the South China Sea, related to the monsoon, BSISO, and convectively coupled waves, modifies the local diurnal cycle, synoptic systems, and air sea interaction in coastal regions and nearby open seas.

Influence of Observed Diurnal Cycles of Aerosol Optical Depth on Aerosol Direct Radiative Effect

NASA Technical Reports Server (NTRS)

Arola, A.; Eck, T. F.; Huttunen, J.; Lehtinen, K. E. J.; Lindfors, A. V.; Myhre, G.; Smirinov, A.; Tripathi, S. N.; Yu, H.

2013-01-01

The diurnal variability of aerosol optical depth (AOD) can be significant, depending on location and dominant aerosol type. However, these diurnal cycles have rarely been taken into account in measurement-based estimates of aerosol direct radiative forcing (ADRF) or aerosol direct radiative effect (ADRE). The objective of our study was to estimate the influence of diurnal aerosol variability at the top of the atmosphere ADRE estimates. By including all the possible AERONET sites, we wanted to assess the influence on global ADRE estimates. While focusing also in more detail on some selected sites of strongest impact, our goal was to also see the possible impact regionally.We calculated ADRE with different assumptions about the daily AOD variability: taking the observed daily AOD cycle into account and assuming diurnally constant AOD. Moreover, we estimated the corresponding differences in ADREs, if the single AOD value for the daily mean was taken from the the Moderate Resolution Imaging Spectroradiometer (MODIS) Terra or Aqua overpass times, instead of accounting for the true observed daily variability. The mean impact of diurnal AOD variability on 24 h ADRE estimates, averaged over all AERONET sites, was rather small and it was relatively small even for the cases when AOD was chosen to correspond to the Terra or Aqua overpass time. This was true on average over all AERONET sites, while clearly there can be much stronger impact in individual sites. Examples of some selected sites demonstrated that the strongest observed AOD variability (the strongest morning afternoon contrast) does not typically result in a significant impact on 24 h ADRE. In those cases, the morning and afternoon AOD patterns are opposite and thus the impact on 24 h ADRE, when integrated over all solar zenith angles, is reduced. The most significant effect on daily ADRE was induced by AOD cycles with either maximum or minimum AOD close to local noon. In these cases, the impact on 24 h ADRE was typically around 0.1-0.2W/sq m (both positive and negative) in absolute values, 5-10% in relative ones.

Linking diurnal trends in methylmercury concentration and organic matter photo-reactivity in wetlands of the Yolo Bypass, California

NASA Astrophysics Data System (ADS)

Fleck, J. A.; Downing, B. D.; Saraceno, J.; Gill, G.; Stephenson, M.; Bergamaschi, B. A.

2008-12-01

Aqueous concentrations of methylmercury (MeHg) are known to vary temporally and spatially due to multiple concurrent production and loss mechanisms, and due to variations in the hydrologic connectivity between the methylating substrate (most commonly the benthos) and the overlying water compartments. Diurnal trends in MeHg production, bacterial demethylation, photo-demethylation, diffusion and advection transport processes have been identified and investigated; however, the magnitude and relative importance of each process in mediating overlying water MeHg concentrations, is not well known in natural wetland systems. Temporal variations in aqueous MeHg concentrations may impact the biological accumulation of MeHg into the base of the aquatic food chain, and may challenge regulatory efforts designed to mitigate MeHg exports from point and non-point sources. To identify the possible "hot moments" during the diurnal cycle, surface water MeHg concentrations were monitored in two agricultural wetland settings (wild rice and white rice fields) over a 24- hour period within the Yolo Bypass Wildlife Area, California using a combination of in situ optical sensors and traditional surface-water grab samples. In the wild rice field, MeHg concentrations doubled from 1 ng/L to 2 ng/L over the nighttime hours and returned to 1 ng/L during the daylight hours, whereas the white rice field showed no significant variation in MeHg concentration (0.73 +/- 0.08 ng/L) throughout the diurnal cycle. Similar trends were observed when MeHg data was expressed as a percentage of total Hg, with both wetland habitats exhibiting similar levels (20% MeHg) following the nighttime period and the wild rice field declining to 10% in the early evening. Field parameters measured in situ (including: solar radiation, pH, dissolved oxygen, and temperature) exhibited large diurnal trends in both wetlands, whereas optical proxies for dissolved organic matter (DOM) composition mirrored the fluctuations in MeHg concentration and %MeHg, with a strong diurnal trend in wild rice and no apparent trend in white rice. These results suggest a unique link between DOM photo-reactivity and photo-demethylation in these wetlands that challenges traditional monitoring efforts in terms of defining generalized "hot moments" associated with the diurnal cycling of MeHg in shallow agricultural wetland settings.

Diurnal cortisol and mental well-being in middle and older age: evidence from four cohort studies

PubMed Central

Stafford, Mai; Ben-Shlomo, Yoav; Cooper, Cyrus; Gale, Catharine; Gardner, Michael P; Geoffroy, Marie-Claude; Power, Chris; Kuh, Diana; Cooper, Rachel

2017-01-01

Objectives We conducted an individual participant meta-analysis to test the hypothesis that cortisol patterns indicative of dysregulated hypothalamic–pituitary–adrenal axis functioning would be prospectively associated with poorer well-being at follow-up. Setting Four large UK-based cohort studies. Participants Those providing valid salivary or serum cortisol samples (n=7515 for morning cortisol; n=1612 for cortisol awakening response) at baseline (age 44–82) and well-being data on the Warwick Edinburgh Mental Wellbeing Scale at follow-up (0–8 years) were included. Results Well-being was not associated with morning cortisol, diurnal slope or awakening response though a borderline association with evening cortisol was found. Adjusting for sex and follow-up time, each 1 SD increase in evening cortisol was associated with a −0.47 (95% CI −1.00 to 0.05) point lower well-being. This was attenuated by adjustment for body mass index, smoking and socioeconomic position. Between-study heterogeneity was low. Conclusions This study does not support the hypothesis that diurnal cortisol is prospectively associated with well-being up to 8 years later. However, replication in prospective studies with cortisol samples over multiple days is required. PMID:29025828

Changes in the Diurnal Rhythms during a 45-Day Head-Down Bed Rest

PubMed Central

Liang, Xiaodi; Zhang, Lin; Wan, Yufeng; Yu, Xinyang; Guo, Yiming; Chen, Xiaoping; Tan, Cheng; Huang, Tianle; Shen, Hanjie; Chen, Xianyun; Li, Hongying; Lv, Ke; Sun, Fei; Chen, Shanguang; Guo, Jinhu

2012-01-01

In spaceflight human circadian rhythms and sleep patterns are likely subject to change, which consequently disturbs human physiology, cognitive abilities and performance efficiency. However, the influence of microgravity on sleep and circadian clock as well as the underlying mechanisms remain largely unknown. Placing volunteers in a prone position, whereby their heads rest at an angle of −6° below horizontal, mimics the microgravity environment in orbital flight. Such positioning is termed head-down bed rest (HDBR). In this work, we analysed the influence of a 45-day HDBR on physiological diurnal rhythms. We examined urinary electrolyte and hormone excretion, and the results show a dramatic elevation of cortisol levels during HDBR and recovery. Increased diuresis, melatonin and testosterone were observed at certain periods during HDBR. In addition, we investigated the changes in urination and defecation frequencies and found that the rhythmicity of urinary frequency during lights-off during and after HDBR was higher than control. The grouped defecation frequency data exhibits rhythmicity before and during HDBR but not after HDBR. Together, these data demonstrate that HDBR can alter a number of physiological processes associated with diurnal rhythms. PMID:23110150

Diurnal global variability of the Earth's magnetic field during geomagnetically quiet conditions

NASA Astrophysics Data System (ADS)

Klausner, V.

2012-12-01

This work proposes a methodology (or treatment) to establish a representative signal of the global magnetic diurnal variation. It is based on a spatial distribution in both longitude and latitude of a set of magnetic stations as well as their magnetic behavior on a time basis. We apply the Principal Component Analysis (PCA) technique using gapped wavelet transform and wavelet correlation. This new approach was used to describe the characteristics of the magnetic variations at Vassouras (Brazil) and 12 other magnetic stations spread around the terrestrial globe. Using magnetograms from 2007, we have investigated the global dominant pattern of the Sq variation as a function of low solar activity. This year was divided into two seasons for seasonal variation analysis: solstices (June and December) and equinoxes (March and September). We aim to reconstruct the original geomagnetic data series of the H component taking into account only the diurnal variations with periods of 24 hours on geomagnetically quiet days. We advance a proposal to reconstruct the Sq baseline using only the PCA first mode. The first interpretation of the results suggests that PCA/wavelet method could be used to the reconstruction of the Sq baseline.

Invasion of Ancestral Mammals into Dim-light Environments Inferred from Adaptive Evolution of the Phototransduction Genes.

PubMed

Wu, Yonghua; Wang, Haifeng; Hadly, Elizabeth A

2017-04-20

Nocturnality is a key evolutionary innovation of mammals that enables mammals to occupy relatively empty nocturnal niches. Invasion of ancestral mammals into nocturnality has long been inferred from the phylogenetic relationships of crown Mammalia, which is primarily nocturnal, and crown Reptilia, which is primarily diurnal, although molecular evidence for this is lacking. Here we used phylogenetic analyses of the vision genes involved in the phototransduction pathway to predict the diel activity patterns of ancestral mammals and reptiles. Our results demonstrated that the common ancestor of the extant Mammalia was dominated by positive selection for dim-light vision, supporting the predominate nocturnality of the ancestral mammals. Further analyses showed that the nocturnality of the ancestral mammals was probably derived from the predominate diurnality of the ancestral amniotes, which featured strong positive selection for bright-light vision. Like the ancestral amniotes, the common ancestor of the extant reptiles and various taxa in Squamata, one of the main competitors of the temporal niches of the ancestral mammals, were found to be predominate diurnality as well. Despite this relatively apparent temporal niche partitioning between ancestral mammals and the relevant reptiles, our results suggested partial overlap of their temporal niches during crepuscular periods.

Summer behavior of immature radio-equipped woodcock in central Maine

USGS Publications Warehouse

Dunford, R.D.; Owen, R.B.

1973-01-01

The behavior of 15 immature American woodcock (Philohela minor) was studied in central Maine during the summers of 1969 and 1970 using radiotelemetry. The monitored birds used a variety of nocturnal sites including old fields, bogs, powerlines, highway medians, woods roads, and fore clearings. Old fields were occupied more often than any other type of opening. Second growth-hardwoods, alders, hardwood-conifers, and conifers were utilized as diurnal cover. Diurnal locations of radio-equipped woodcock averaged 15 m from major breaks in the forest canopy. Four birds were monitored continuously during the day and night to detennine periods of activity. Although the birds were active throughout the day, very little activity was recorded after they moved to nocturnal sites. No apparent difference was found in the daily patterns of movement between immature male and female woodcock. Crepuscular movements between diurnal covers and nocturnal areas averaged 332 m. A composite summer range for the 15 woodcock during 183 woodcock-days was 1060 hectares. The data suggest that immature woodcock are quite mobile during the summer and utilize most of the forest openings occurring within 1-3 km of good nesting habitat. Most of these openings are also used for singing grounds by males in the spring.

Sondrestrom incoherent scatter radar observations during the lower thermosphere coupling study - September 21-26, 1987

NASA Astrophysics Data System (ADS)

Johnson, R. M.

1991-02-01

The incoherent scatter radar located at Sondre Stromfjord (Greenland) obtained E and F region measurements during the first Lower Thermosphere Coupling Study (LTCS 1), September 21-26, 1987. Lower thermospheric neutral winds deduced from these measurements show that the neutral dynamics are influenced by both tidal oscillations and magnetospheric forcing. During an interval which was relatively quiet geomagnetically, September 23-24, a semidiurnal oscillation dominated the neutral motion. The model equinox tidal amplitudes and phases of Forbes (1982) for the diurnal tide are roughly in agreement with the observed diurnal oscillation for the first four days of the experiment. Vertical variations in the observed diurnal phases are consistent with the results of Forbes and Hagan (1988) and may provide evidence of dissipation of the propagating (1, 1) tidal mode. The semidiurnal motion observed during this period is not well represented by the recent theoretical results for the amplitude and phase of the semidiurnal tide (Forbes and Vial, 1991). Neutral winds obtained during a geomagnetically active interval, September 25-26, displayed a flow pattern that was significantly distorted from that observed during the preceding, relatively quiet interval.

Tidal regime dictates the cascading consumptive and nonconsumptive effects of multiple predators on a marsh plant.

PubMed

Kimbro, David L

2012-02-01

Prey perception of predators can dictate how prey behaviorally balance the need to avoid being eaten with the need to consume resources, and this perception and consequent behavior can be strongly influenced by physical processes. Physical factors, however, can also alter the density and diversity of predators that pursue prey. Thus, it remains uncertain to what extent variable risk perception and antipredator behavior vs. variation in predator consumption of prey underlie prey-resource dynamics and give rise to large-scale patterns in natural systems. In an experimental food web where tidal inundation of marsh controls which predators access prey, crab and conch (predators) influenced the survivorship and antipredator behavior of snails (prey) irrespective of whether tidal inundation occurred on a diurnal or mixed semidiurnal schedule. Specifically, cues of either predator caused snails to ascend marsh leaves; snail survivorship was reduced more by unrestrained crabs than by unrestrained conchs; and snail survivorship was lowest with multiple predators than with any single predator despite interference. In contrast to these tidally consistent direct consumptive and nonconsumptive effects, indirect predator effects differed with tidal regime: snail grazing of marsh leaves in the presence of predators increased in the diurnal tide but decreased in the mixed semidiurnal tidal schedule, overwhelming the differences in snail density that resulted from direct predation. In addition, results suggest that snails may increase their foraging to compensate for stress-induced metabolic demand in the presence of predator cues. Patterns from natural marshes spanning a tidal inundation gradient (from diurnal to mixed semidiurnal tides) across 400 km of coastline were consistent with experimental results: despite minimal spatial variation in densities of predators, snails, abiotic stressors, and marsh productivity, snail grazing on marsh plants increased and plant biomass decreased on shorelines exposed to a diurnal tide. Because both the field and experimental results can be explained by tidal-induced variation in risk perception and snail behavior rather than by changes in snail density, this study reinforces the importance of nonconsumptive predator effects in complex natural systems and at large spatial scales.

The role of Phragmites in the CH4 and CO2 fluxes in a minerotrophic peatland in southwest Germany

NASA Astrophysics Data System (ADS)

van den Berg, Merit; Ingwersen, Joachim; Lamers, Marc; Streck, Thilo

2016-11-01

Peatlands are interesting as a carbon storage option, but are also natural emitters of the greenhouse gas methane (CH4). Phragmites peatlands are particularly interesting due to the global abundance of this wetland plant (Phragmites australis) and the highly efficient internal gas transport mechanism, which is called humidity-induced convection (HIC). The research aims were to (1) clarify how this plant-mediated gas transport influences the CH4 fluxes, (2) which other environmental variables influence the CO2 and CH4 fluxes, and (3) whether Phragmites peatlands are a net source or sink of greenhouse gases. CO2 and CH4 fluxes were measured with the eddy covariance technique within a Phragmites-dominated fen in southwest Germany. One year of flux data (March 2013-February 2014) shows very clear diurnal and seasonal patterns for both CO2 and CH4. The diurnal pattern of CH4 fluxes was only visible when living, green reed was present. In August the diurnal cycle of CH4 was the most distinct, with 11 times higher midday fluxes (15.7 mg CH4 m-2 h-1) than night fluxes (1.41 mg CH4 m-2 h-1). This diurnal cycle has the highest correlation with global radiation, which suggests a high influence of the plants on the CH4 flux. But if the cause were the HIC, it would be expected that relative humidity would correlate stronger with CH4 flux. Therefore, we conclude that in addition to HIC, at least one additional mechanism must be involved in the creation of the convective flow within the Phragmites plants. Overall, the fen was a sink for carbon and greenhouse gases in the measured year, with a total carbon uptake of 221 g C m-2 yr-1 (26 % of the total assimilated carbon). The net uptake of greenhouse gases was 52 g CO2 eq. m-2 yr-1, which is obtained from an uptake of CO2 of 894 g CO2 eq. m-2 yr-1 and a release of CH4 of 842 g CO2 eq. m-2 yr-1.

Phase Advance of the Light-Dark Cycle Perturbs Diurnal Rhythms of Brain-derived Neurotrophic Factor and Neurotrophin-3 Protein Levels, Which Reduces Synaptophysin-positive Presynaptic Terminals in the Cortex of Juvenile Rats

PubMed Central

Hamatake, Michiko; Miyazaki, Noriko; Sudo, Kaori; Matsuda, Motoko; Sadakata, Tetsushi; Furuya, Asako; Ichisaka, Satoshi; Hata, Yoshio; Nakagawa, Chiaki; Nagata, Koh-ichi; Furuichi, Teiichi; Katoh-Semba, Ritsuko

2011-01-01

In adult rat brains, brain-derived neurotrophic factor (BDNF) rhythmically oscillates according to the light-dark cycle and exhibits unique functions in particular brain regions. However, little is known of this subject in juvenile rats. Here, we examined diurnal variation in BDNF and neurotrophin-3 (NT-3) levels in 14-day-old rats. BDNF levels were high in the dark phase and low in the light phase in a majority of brain regions. In contrast, NT-3 levels demonstrated an inverse phase relationship that was limited to the cerebral neocortex, including the visual cortex, and was most prominent on postnatal day 14. An 8-h phase advance of the light-dark cycle and sleep deprivation induced an increase in BDNF levels and a decrease in NT-3 levels in the neocortex, and the former treatment reduced synaptophysin expression and the numbers of synaptophysin-positive presynaptic terminals in cortical layer IV and caused abnormal BDNF and NT-3 rhythms 1 week after treatment. A similar reduction of synaptophysin expression was observed in the cortices of Bdnf gene-deficient mice and Ca2+-dependent activator protein for secretion 2 gene-deficient mice with abnormal free-running rhythm and autistic-like phenotypes. In the latter mice, no diurnal variation in BDNF levels was observed. These results indicate that regular rhythms of BDNF and NT-3 are essential for correct cortical network formation in juvenile rodents. PMID:21527636

Phase advance of the light-dark cycle perturbs diurnal rhythms of brain-derived neurotrophic factor and neurotrophin-3 protein levels, which reduces synaptophysin-positive presynaptic terminals in the cortex of juvenile rats.

PubMed

Hamatake, Michiko; Miyazaki, Noriko; Sudo, Kaori; Matsuda, Motoko; Sadakata, Tetsushi; Furuya, Asako; Ichisaka, Satoshi; Hata, Yoshio; Nakagawa, Chiaki; Nagata, Koh-ichi; Furuichi, Teiichi; Katoh-Semba, Ritsuko

2011-06-17

In adult rat brains, brain-derived neurotrophic factor (BDNF) rhythmically oscillates according to the light-dark cycle and exhibits unique functions in particular brain regions. However, little is known of this subject in juvenile rats. Here, we examined diurnal variation in BDNF and neurotrophin-3 (NT-3) levels in 14-day-old rats. BDNF levels were high in the dark phase and low in the light phase in a majority of brain regions. In contrast, NT-3 levels demonstrated an inverse phase relationship that was limited to the cerebral neocortex, including the visual cortex, and was most prominent on postnatal day 14. An 8-h phase advance of the light-dark cycle and sleep deprivation induced an increase in BDNF levels and a decrease in NT-3 levels in the neocortex, and the former treatment reduced synaptophysin expression and the numbers of synaptophysin-positive presynaptic terminals in cortical layer IV and caused abnormal BDNF and NT-3 rhythms 1 week after treatment. A similar reduction of synaptophysin expression was observed in the cortices of Bdnf gene-deficient mice and Ca(2+)-dependent activator protein for secretion 2 gene-deficient mice with abnormal free-running rhythm and autistic-like phenotypes. In the latter mice, no diurnal variation in BDNF levels was observed. These results indicate that regular rhythms of BDNF and NT-3 are essential for correct cortical network formation in juvenile rodents.

Diurnal variations of dissolved and colloidal organic carbon and trace metals in a boreal lake during summer bloom.

PubMed

Pokrovsky, O S; Shirokova, L S

2013-02-01

This work describes variation of element concentration in surface water of a subarctic organic-rich lake during the diurnal cycle of photosynthesis. An unusually hot summer 2010 in European part of subarctic Russia produced elevated surface water temperature (28-30 °C) and caused massive cyanobacterial bloom. Diurnal variation of ~40 dissolved macro and trace elements and organic carbon were recorded in the humic Lake Svyatoe in the White Sea drainage basin. Two days continuous measurements with 3 h sampling steps at the surface (0.5 m) allowed tracing cyanobacterial activity via pH and O₂ measurement and revealed constant concentrations (within ±20-30%) of all major elements (Na, Mg, Cl, SO₄, K, Ca), organic and inorganic carbon and most trace elements (Li, B, Sc, Ti, Ni, Cu, Ga, As, Rb, Sr, Y, Zr, Mo, Sb, medium and heavy REEs, Hf, Pb, Th, U). The concentration of Mn demonstrated a factor of 3 decrease during the day following Mn adsorption onto cyanobacterial cells due to ~1 pH unit raise during the photosynthesis and Mn release during the night due to desorption from the cell surface. The role of Mn(II) photo-oxidation by reactive oxygen species could be also pronounced, although its contribution to Mn diurnal variation was much smaller than the adsorption at the cell surfaces. Similar pattern, but with much lesser variations (c.a., 10-20%), was recorded for Ba and Fe. On-site ultrafiltration technique allowed to distinguish between low molecular weight (LMW) complexes (<1 kDa) and high molecular weight (HMW) colloids (1 kDa-0.22 μm) and to assess their diurnal pattern. Colloidal Al and Fe were the highest during the night, when the contribution of HMW allochthonous colloids was maximal. Typical insoluble trivalent and tetravalent elements exhibited constant complexation (>80-90%) with HMW allochthonous organics, independent on the diel photosynthetic cycle. Finally, biologically-relevant metals (Cu, Co, Cr, V, and Ni) demonstrated significant variations of colloidal fractions (from 10 to 60%) not directly related to the photosynthesis. The majority of possible metal nutrients, being strongly associated with organic and organo-mineral colloids do not exhibit any measurable concentration variation during photosynthesis. The two types of element behavior during cyanobacterial bloom in the water column--constant concentration and sinusoidal variations--likely depend on element speciation in solution and their relative affinity to surfaces of aquatic microorganisms and complexation with authochthonous and allochthonous organic matter. Copyright © 2012 Elsevier Ltd. All rights reserved.

Interactions of cortisol, testosterone, and resistance training: influence of circadian rhythms.

PubMed

Hayes, Lawrence D; Bickerstaff, Gordon F; Baker, Julien S

2010-06-01

Diurnal variation of sports performance usually peaks in the late afternoon, coinciding with increased body temperature. This circadian pattern of performance may be explained by the effect of increased core temperature on peripheral mechanisms, as neural drive does not appear to exhibit nycthemeral variation. This typical diurnal regularity has been reported in a variety of physical activities spanning the energy systems, from Adenosine triphosphate-phosphocreatine (ATP-PC) to anaerobic and aerobic metabolism, and is evident across all muscle contractions (eccentric, isometric, concentric) in a large number of muscle groups. Increased nerve conduction velocity, joint suppleness, increased muscular blood flow, improvements of glycogenolysis and glycolysis, increased environmental temperature, and preferential meteorological conditions may all contribute to diurnal variation in physical performance. However, the diurnal variation in strength performance can be blunted by a repeated-morning resistance training protocol. Optimal adaptations to resistance training (muscle hypertrophy and strength increases) also seem to occur in the late afternoon, which is interesting, since cortisol and, particularly, testosterone (T) concentrations are higher in the morning. T has repeatedly been linked with resistance training adaptation, and higher concentrations appear preferential. This has been determined by suppression of endogenous production and exogenous supplementation. However, the cortisol (C)/T ratio may indicate the catabolic/anabolic environment of an organism due to their roles in protein degradation and protein synthesis, respectively. The morning elevated T level (seen as beneficial to achieve muscle hypertrophy) may be counteracted by the morning elevated C level and, therefore, protein degradation. Although T levels are higher in the morning, an increased resistance exercise-induced T response has been found in the late afternoon, suggesting greater responsiveness of the hypothalamo-pituitary-testicular axis then. Individual responsiveness has also been observed, with some participants experiencing greater hypertrophy and strength increases in response to strength protocols, whereas others respond preferentially to power, hypertrophy, or strength endurance protocols dependent on which protocol elicited the greatest T response. It appears that physical performance is dependent on a number of endogenous time-dependent factors, which may be masked or confounded by exogenous circadian factors. Strength performance without time-of-day-specific training seems to elicit the typical diurnal pattern, as does resistance training adaptations. The implications for this are (a) athletes are advised to coincide training times with performance times, and (b) individuals may experience greater hypertrophy and strength gains when resistance training protocols are designed dependent on individual T response.

Coding-Sequence Identification and Transcriptional Profiling of Nine AMTs and Four NRTs From Tobacco Revealed Their Differential Regulation by Developmental Stages, Nitrogen Nutrition, and Photoperiod

PubMed Central

Liu, Lai-Hua; Fan, Teng-Fei; Shi, Dong-Xue; Li, Chang-Jun; He, Ming-Jie; Chen, Yi-Yin; Zhang, Lei; Yang, Chao; Cheng, Xiao-Yuan; Chen, Xu; Li, Di-Qin; Sun, Yi-Chen

2018-01-01

Although many members encoding different ammonium- and nitrate-transporters (AMTs, NRTs) were identified and functionally characterized from several plant species, little is known about molecular components for NH4+- and NO3- acquisition/transport in tobacco, which is often used as a plant model for biological studies besides its agricultural and industrial interest. We reported here the first molecular identification in tobacco (Nicotiana tabacum) of nine AMTs and four NRTs, which are respectively divided into four (AMT1/2/3/4) and two (NRT1/2) clusters and whose functionalities were preliminarily evidenced by heterologous functional-complementation in yeast or Arabidopsis. Tissue-specific transcriptional profiling by qPCR revealed that NtAMT1.1/NRT1.1 mRNA occurred widely in leaves, flower organs and roots; only NtAMT1.1/1.3/2.1NRT1.2/2.2 were strongly transcribed in the aged leaves, implying their dominant roles in N-remobilization from source/senescent tissues. N-dependent expression analysis showed a marked upregulation of NtAMT1.1 in the roots by N-starvation and resupply with N including NH4+, suggesting a predominant action of NtAMT1.1 in NH4+ uptake/transport whenever required. The obvious leaf-expression of other NtAMTs e.g., AMT1.2 responsive to N indicates a major place, where they may play transport roles associated with plant N-status and (NH4+-)N movement within aerial-parts. The preferentially root-specific transcription of NtNRT1.1/1.2/2.1 responsive to N argues their importance for root NO3- uptake and even sensing in root systems. Moreover, of all NtAMTs/NRTs, only NtAMT1.1/NRT1.1/1.2 showed their root-expression alteration in a typical diurnal-oscillation pattern, reflecting likely their significant roles in root N-acquisition regulated by internal N-demand influenced by diurnal-dependent assimilation and translocation of carbohydrates from shoots. This suggestion could be supported at least in part by sucrose- and MSX-affected transcriptional-regulation of NtNRT1.1/1.2. Thus, present data provide valuable molecular bases for the existence of AMTs/NRTs in tobacco, promoting a deeper understanding of their biological functions. PMID:29563921

Diurnal variability of CO2 and CH4 emissions from tropical reservoirs

NASA Astrophysics Data System (ADS)

Linkhorst, Annika; Reinaldo Paranaíba, José; Barros, Nathan; DelSontro, Tonya; Isidorova, Anastasija; Mendonça, Raquel; Sobek, Sebastian

2017-04-01

Reservoirs are important atmospheric sources of carbon dioxide (CO2) and methane (CH4) with CH4 being a greenhouse gas (GHG) at least 28 times more potent than CO2. Reservoir GHG emissions tend to be heterogeneous, however, and thus current emission estimates are likely conservative since they often overlook emission hot spots and hot moments, especially for CH4 ebullition. For CO2, diffusion is the dominant flux pathway, and diurnal patterns in CO2 emissions can largely be linked to photosynthesis. In contrast, ebullition, the release of gases through bubbles that are formed in the sediments and travel through the water column, is a major emission pathway for CH4 in shallow waters. We visually observed a change in quantity and size of bubbles at different times of the day, and therefore conducted a diurnal study in four different Brazilian reservoirs of different size, age, climatic and geographic characteristics. We hypothesized that sub-daily trends in CH4 ebullition occur in Brazilian reservoirs as bubble release depends on physical factors such as turbulence and hydrostatic pressure, which can exhibit sub-daily patterns in large, managed reservoirs. In each reservoir, we performed measurements of CO2 and CH4 fluxes at one location over 24 hours. CH4 ebullition was tracked continuously by an echosounder, and 13 anchored bubble traps per reservoir were sampled every three hours. Further, a custom-built equilibrator monitored dissolved CH4 and CO2 concentrations, and diffusive and total fluxes of CO2 and CH4 were measured using floating chambers in triplicates every 30 minutes during the same period. We observed that CH4 ebullition as well as CH4 and CO2 diffusion peaked during the day, with peak fluxes being up to four times higher than low fluxes. However, the exact timing and magnitude varied for the different sampling events, and could in part be linked to biological and physical properties of the respective reservoir. This study combined different state-of-the-art techniques to show, for the first time, short-scale temporal variability for both diffusion and ebullition of CO2 and CH4 in different tropical reservoirs. It shows substantial and non-negligable diurnal variability in GHG emission from tropical reservoirs. Further studies are needed to find out if the pattern of low flux during night needs to be accounted for in estimations of GHG emission from reservoirs.

Posttraumatic stress symptoms related to community violence and children's diurnal cortisol response in an urban community-dwelling sample.

PubMed

Suglia, Shakira Franco; Staudenmayer, John; Cohen, Sheldon; Wright, Rosalind J

2010-03-01

While community violence has been linked to psychological morbidity in urban youth, data on the physiological correlates of violence and associated posttraumatic stress symptoms are sparse. We examined the influence of child posttraumatic stress symptoms reported in relationship to community violence exposure on diurnal salivary cortisol response in a population based sample of 28 girls and 15 boys ages 7-13, 54% self-identified as white and 46% as Hispanic. Mothers' reported on the child's exposure to community violence using the Survey of Children's Exposure to Community Violence and completed the Checklist of Children's Distress Symptoms (CCDS) which captures factors related to posttraumatic stress; children who were eight years of age or greater reported on their own community violence exposure. Saliva samples were obtained from the children four times a day (after awakening, lunch, dinner and bedtime) over three days. Mixed models were used to assess the influence of posttraumatic stress symptoms on cortisol expression, examined as diurnal slope and area under the curve (AUC), calculated across the day, adjusting for socio-demographics. In adjusted analyses, higher scores on total traumatic stress symptoms (CCDS) were associated with both greater cortisol AUC and with a flatter cortisol waking to bedtime rhythm. The associations were primarily attributable to differences on the intrusion, arousal and avoidance CCDS subscales. Posttraumatic stress symptomatology reported in response to community violence exposure was associated with diurnal cortisol disruption in these community-dwelling urban children.

Mechanisms of cadmium-induced chronotoxicity in mice.

PubMed

Miura, Nobuhiko; Ashimori, Atsushige; Takeuchi, Asuka; Ohtani, Katsumi; Takada, Naoko; Yanagiba, Yukie; Mita, Masaharu; Togawa, Masako; Hasegawa, Tatsuya

2013-01-01

Biological defense factors show diurnal variations in their expression levels or activities. These variations can induce the different sensitivity to external toxicants of a day. We reported earlier that mice showed clear diurnal variation of cadmium (Cd)-induced toxicity, i.e., chronotoxicity. In this report, we investigated additional new evidences for the cadmium (Cd)-induced chronotoxicity, and considered the mechanisms contributed to this chronotoxicity. Male C57BL/6J mice were injected with CdCl₂ (6.4 mg/kg, one shot) intraperitoneally at 6 different time points of a day (zeitgeber time (ZT); ZT2, ZT6, ZT10, ZT14, ZT18 or ZT22) followed by monitoring the mortality until 14 days after the injection. We observed extreme difference in survival numbers: surprisingly, all mice died at ZT2 injection while all mice survived at ZT18 injection. Moreover, in non-lethal dose of Cd (4.5 mg/kg), the values of alanine aminotransferase (ALT) and aspartate aminotransferase (AST) used as indexes of hepatotoxicity markedly increased at ZT6 injection while mostly unchanged at ZT18 injection. To consider the mechanisms of this extreme diurnal variation, we examined biochemical studies and concluded that the diurnal variation was not caused by the differences in hepatic Cd level, basal hepatic metallothionein (MT) level, and induction level or induction speed of hepatic MT. We suggested that one of the candidate determination factors was glutathione. We believe that the "chronotoxicology" for metal toxicity may be classic, yet new viewpoint in modern toxicology field.

New insights into hydrochemical processes in lowland river systems gained from in situ, high-resolution monitoring

NASA Astrophysics Data System (ADS)

Wade, Andrew; Palmer-Felgate, Elizabeth; Halliday, Sarah; Skeffington, Richard; Loewenthal, Matthew; Jarvie, Helen; Bowes, Michael; Greenway, Gillian; Haswell, Stephen; Bell, Ian; Joly, Etienne; Fallatah, Ahmed; Neal, Colin; Williams, Richard; Gozzard, Emma; Newman, Jonathan

2013-04-01

This work focuses on the insights obtained from in situ, high-resolution hydrochemical monitoring in three lowland UK catchments experiencing different levels of nutrient enrichment. Between November 2009 and February 2012, the upper River Kennet, the River Enborne and The Cut, all located within the Thames basin, southeast England, were instrumented with in situ analytical equipment to make hourly measurements of a range of hydrochemical determinands. The upper River Kennet is a rural catchment with limited effluent inputs above the selected monitoring point. The River Enborne is a rural catchment, impacted by agricultural runoff, and septic tank and sewage treatment works (STWs) discharges. The Cut is a highly urbanised system significantly affected by STW discharges. On the upper River Kennet and the River Enborne hourly measurements of Total Reactive Phosphorus (TRP) were made using a Systea Micromac C. In addition on the River Enborne, a Hach Lange Nitratax was used to measure nitrate (NO3). On The Cut both Total P and TRP were measured using a Hach Lange Phosphax Sigma. At all stations nutrient monitoring was supplemented with hourly pH, chlorophyll, dissolved oxygen, conductivity, turbidity and water temperature using YSI 6600 Multi-parameter sondes. Instream hydrochemical dynamics were investigated using non-stationary time-series analysis techniques. The results reveal complex nutrient dynamics, with diurnal patterns which exhibit seasonal changes in phase and amplitude, and are influenced by flow conditions, shading and nutrient sources. On the River Enborne a marked diurnal cycle was present within the streamwater NO3 time-series. The cycle was strongest in the spring before riparian shading developed. At times of low flow a two peak diurnal cycle was also evident in the streamwater NO3 time-series. The reduction in diurnal NO3 processing after the development of riparian shading was also accompanied by a marked drop in dissolved oxygen at this time. The presence of a two peak diurnal cycle is indicative of the dominance of STW discharges to the system, as STW discharges exhibit a marked two peak diurnal cycle associated with peak water usage. This two peak diurnal cycling can also been seen in the River Enborne TRP data. The dominance of effluent discharges was also evident in the River Enborne seasonal NO3 and TRP dynamics. Both determinands displayed summer time peaks caused by the reduced dilution capacity of the system and increased water residence time during the low flow summer months. The TP and TRP dynamics on The Cut were highly complex with significant diurnal fluctuations. Although, a two peak diurnal signal was evident within the TRP time-series it was difficult to characterise due to the complexity of the dynamics observed. Monitoring on the upper River Kennet highlighted the challenges associated with undertaking in situ analytical monitoring without mains electricity. Resampling of the data at lower sampling frequencies demonstrated that within the point-source dominated catchments, daily monitoring was sufficient for accurate load estimation.

Family income and appraisals of parental conflict as predictors of psychological adjustment and diurnal cortisol in emerging adulthood.

PubMed

Lucas-Thompson, Rachel G; Hostinar, Camelia E

2013-10-01

The goal of the current study was to provide the first investigation of whether appraisals of parental marital conflict mediate associations of family income with emerging adult psychological adjustment and diurnal cortisol production. Participants were 178 college students who provided 3 saliva samples across the day and reported their family income, adjustment (depressive symptoms, perceived daily stress, internalizing problems, and externalizing problems), and appraisals of their parents' conflict (including perceptions of frequency, intensity, resolution, stability, as well as perceived threat and self-blame for conflict). Results indicated that emerging adults from low-income families reported more-negative conflict appraisals, which in turn predicted lower levels of adjustment; there was no association between income and patterns of cortisol production across the day. However, emerging adults who felt responsible for their parents' conflict displayed cortisol levels that were lower early in the day, with a tendency toward blunted cortisol slopes across the day; those who appraised their parents' conflict less negatively displayed a more normative pattern of cortisol production. These results suggest that effects of family income on psychological adjustment are explained, in part, by appraisals of parental conflict, particularly of appraisals of conflict as threatening, whereas self-blame conflict appraisals have main effects on cortisol, and predict a dysregulated and potentially maladaptive pattern of cortisol production across the day for emerging adults.

Diurnal and twenty-four hour patterning of human diseases: acute and chronic common and uncommon medical conditions.

PubMed

Smolensky, Michael H; Portaluppi, Francesco; Manfredini, Roberto; Hermida, Ramon C; Tiseo, Ruana; Sackett-Lundeen, Linda L; Haus, Erhard L

2015-06-01

The symptom intensity and mortality of human diseases, conditions, and syndromes exhibit diurnal or 24 h patterning, e.g., skin: atopic dermatitis, urticaria, psoriasis, and palmar hyperhidrosis; gastrointestinal: esophageal reflux, peptic ulcer (including perforation and hemorrhage), cyclic vomiting syndrome, biliary colic, hepatic variceal hemorrhage, and proctalgia fugax; infection: susceptibility, fever, and mortality; neural: frontal, parietal, temporal, and occipital lobe seizures, Parkinson's and Alzheimer's disease, hereditary progressive dystonia, and pain (cancer, post-surgical, diabetic neuropathic and foot ulcer, tooth caries, burning mouth and temporomandibular syndromes, fibromyalgia, sciatica, intervertebral vacuum phenomenon, multiple sclerosis muscle spasm, and migraine, tension, cluster, hypnic, and paroxysmal hemicranial headache); renal: colic and nocturnal enuresis and polyuria; ocular: bulbar conjunctival redness, keratoconjunctivitis sicca, intraocular pressure and anterior ischemic optic neuropathy, and recurrent corneal erosion syndrome; psychiatric/behavioral: major and seasonal affective depressive disorders, bipolar disorder, parasuicide and suicide, dementia-associated agitation, and addictive alcohol, tobacco, and heroin cravings and withdrawal phenomena; plus autoimmune and musculoskeletal: rheumatoid arthritis, osteoarthritis, axial spondylarthritis, gout, Sjögren's syndrome, and systemic lupus erythematosus. Knowledge of these and other 24 h patterns of human pathophysiology informs research of their underlying circadian and other endogenous mechanisms, external temporal triggers, and more effective patient care entailing clinical chronopreventive and chronotherapeutic strategies. Copyright © 2014 Elsevier Ltd. All rights reserved.

Diurnal Pattern of Leaf, Flower and Fruit Specific Ambient Volatiles above an Oil Palm Plantation in Pará State, Brazil

DOE PAGES

Jardine, Kolby J.; Gimenez, Bruno O.; Araujo, Alessandro C.; ...

2016-01-01

Oil palm plantations are rapidly expanding in the tropics because of insatiable global demand for fruit oil to be used in food, biofuels and cosmetics. Here we show that three tissue-specific volatiles can be quantified in ambient air above an African-American hybrid oil palm plantation in Brazil and linked photosynthesis (isoprene), floral scent (estragole), and for the first time, fruit oil processing (6-methyl-5-hepten-2-one, MHO). Plant enclosure techniques verified their tissue specific emission sources with ambient concentrations displaying distinct diurnal patterns above the canopy. Isoprene concentrations were near zero at night, but dramatically increased during the day while estragole showed elevatedmore » concentrations at night suggesting a light-independent, temperature-driven emission pattern from flowers. MHO also showed elevated concentrations at night and both estragole and MHO increased during the day. Our observations demonstrate that the African-American oil palm hybrid is strong isoprene emitter and suggest that MHO is a specific oxidation product of lycopene released during the industrial processing of palm oil. This study highlights the potential value of quantifying volatile oil palm signals in the atmosphere as a novel, non-invasive method to better understand biological functioning and its interactions with the environment including carbon assimilation, floral-insect interactions, and fruit oil production/processing.« less

Diurnal Pattern of Leaf, Flower and Fruit Specific Ambient Volatiles above an Oil Palm Plantation in Pará State, Brazil

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jardine, Kolby J.; Gimenez, Bruno O.; Araujo, Alessandro C.

Oil palm plantations are rapidly expanding in the tropics because of insatiable global demand for fruit oil to be used in food, biofuels and cosmetics. Here we show that three tissue-specific volatiles can be quantified in ambient air above an African-American hybrid oil palm plantation in Brazil and linked photosynthesis (isoprene), floral scent (estragole), and for the first time, fruit oil processing (6-methyl-5-hepten-2-one, MHO). Plant enclosure techniques verified their tissue specific emission sources with ambient concentrations displaying distinct diurnal patterns above the canopy. Isoprene concentrations were near zero at night, but dramatically increased during the day while estragole showed elevatedmore » concentrations at night suggesting a light-independent, temperature-driven emission pattern from flowers. MHO also showed elevated concentrations at night and both estragole and MHO increased during the day. Our observations demonstrate that the African-American oil palm hybrid is strong isoprene emitter and suggest that MHO is a specific oxidation product of lycopene released during the industrial processing of palm oil. This study highlights the potential value of quantifying volatile oil palm signals in the atmosphere as a novel, non-invasive method to better understand biological functioning and its interactions with the environment including carbon assimilation, floral-insect interactions, and fruit oil production/processing.« less

Neuroticism and introversion are associated with salivary cortisol patterns in adolescents.

PubMed

Hauner, Katherina K Y; Adam, Emma K; Mineka, Susan; Doane, Leah D; DeSantis, Amy S; Zinbarg, Richard; Craske, Michelle; Griffith, James W

2008-11-01

Previous studies have yielded equivocal findings on the relationship between personality and cortisol activity. The present study examined associations between personality and cortisol activity in a large, diverse adolescent sample, while partialling the effects of relevant demographic and health-related covariates. A subsample of 230 participants (57% of whom reported elevated neuroticism) was selected from a larger sample of 16-18-year olds involved in a study on risk factors for emotional disorders. Subsample participants completed a battery of personality questionnaires, and saliva collection was requested several months later on three consecutive days at six time points per day, from wakeup to bedtime. Associations between personality and cortisol rhythms were examined using multilevel growth curve modeling. Neuroticism (N) and introversion (I) were significantly and differentially associated with features of diurnal cortisol patterns. Specifically, a significant N x gender interaction was observed, demonstrating flatter cortisol rhythms across the waking day among male participants with higher N. Elevated I, however, was associated with lower cortisol awakening responses for both male and female participants, and higher cortisol at the time of waking for male participants only. The present study supports personality as a significant predictor of diurnal cortisol patterns in late adolescence, after accounting for the effects of demographic and health covariates, and suggests that gender plays a role in moderating associations between personality and cortisol.

Neuroticism and Introversion are Associated with Salivary Cortisol Patterns in Adolescents

PubMed Central

Hauner, Katherina K. Y.; Adam, Emma K.; Mineka, Susan; Doane, Leah D.; DeSantis, Amy S.; Zinbarg, Richard; Craske, Michelle; Griffith, James W.

2008-01-01

Previous studies have yielded equivocal findings on the relationship between personality and cortisol activity. The present study examined associations between personality and cortisol activity in a large, diverse adolescent sample, while partialling the effects of relevant demographic and health-related covariates. A subsample of 230 participants (57% of whom reported elevated neuroticism) was selected from a larger sample of 16- to 18-year-olds involved in a study on risk factors for emotional disorders. Subsample participants completed a battery of personality questionnaires, and saliva collection was requested several months later on three consecutive days at six time points per day, from wakeup to bedtime. Associations between personality and cortisol rhythms were examined using multilevel growth curve modeling. Neuroticism (N) and introversion (I) were significantly and differentially associated with features of diurnal cortisol patterns. Specifically, a significant N by gender interaction was observed, demonstrating flatter cortisol rhythms across the waking day among male participants with higher N. Elevated I, however, was associated with lower cortisol awakening responses for both male and female participants, and higher cortisol at the time of waking for male participants only. The present study supports personality as a significant predictor of diurnal cortisol patterns in late adolescence, after accounting for the effects of demographic and health covariates, and suggests that gender plays a role in moderating associations between personality and cortisol. PMID:18809259

Genome-wide analysis of day/night DNA methylation differences in Populus nigra.

PubMed

Ding, Chang-Jun; Liang, Li-Xiong; Diao, Shu; Su, Xiao-Hua; Zhang, Bing-Yu

2018-01-01

DNA methylation is an important mechanism of epigenetic modification. Methylation changes during stress responses and developmental processes have been well studied; however, their role in plant adaptation to the day/night cycle is poorly understood. In this study, we detected global methylation patterns in leaves of the black poplar Populus nigra 'N46' at 8:00 and 24:00 by methylated DNA immunoprecipitation sequencing (MeDIP-seq). We found 10,027 and 10,242 genes to be methylated in the 8:00 and 24:00 samples, respectively. The methylated genes appeared to be involved in multiple biological processes, molecular functions, and cellular components, suggesting important roles for DNA methylation in poplar cells. Comparing the 8:00 and 24:00 samples, only 440 differentially methylated regions (DMRs) overlapped with genic regions, including 193 hyper- and 247 hypo-methylated DMRs, and may influence the expression of 137 downstream genes. Most hyper-methylated genes were associated with transferase activity, kinase activity, and phosphotransferase activity, whereas most hypo-methylated genes were associated with protein binding, ATP binding, and adenyl ribonucleotide binding, suggesting that different biological processes were activated during the day and night. Our results indicated that methylated genes were prevalent in the poplar genome, but that only a few of these participated in diurnal gene expression regulation.

Assessment of the Performance of a Scanning Wind Doppler Lidar at an Urban-Mountain Site in Seoul

NASA Astrophysics Data System (ADS)

Park, S.; Kim, S. W.

2017-12-01

Winds in the planetary boundary layer (PBL) are important factors for accurate modelling of air quality, numerical weather prediction and conversion of satellite measurements to near-surface air quality information (Seibert et al., AE, 2000; Emeis et al., Meteorol. Z., 2008). In this study, we (1) evaluate wind speed (WS) and direction (WD) retrieved from Wind Doppler Lidar (WDL) measurements by two methods [so called, `sine-fitting (SF) method' and `singular value decomposition (SVD) method'] and (2) analyze the WDL data at Seoul National University (SNU), Seoul, to investigate the diurnal evolution of winds and aerosol characteristics in PBL. Evaluation of the two methods used in retrieving wind from radial velocity was done through comparison with radiosonde soundings from the same site. Winds retrieved using the SVD method from mean radial velocity of 15 minutes showed good agreement with radiosonde profiles (i.e., bias of 0.03 m s-1 and root mean square of 1.70 m s-1 in WS). However, the WDL was found to have difficulty retrieving signals under clean conditions (i.e., too small signal to noise ratio) or under the presence of near-surface optically-thick aerosol/cloud layer (i.e., strong signal attenuation). Despite this shortcoming, the WDL was able to successfully capture the diurnal variation of PBL wind. Two major wind patterns were observed at SNU; first of all, when convective boundary layer was strongly developed, thermally induced winds with large variation of vertical WS in the afternoon and a diurnal variation in WD showing characteristics of mountain and valley winds were observed. Secondly, small variation in WS and WD throughout the day was a major characteristic of cases when wind was largely influenced by the synoptic weather pattern.

New foliage growth is a significant, unaccounted source for volatiles in boreal evergreen forests

NASA Astrophysics Data System (ADS)

Aalto, J.; Kolari, P.; Hari, P.; Kerminen, V.-M.; Schiestl-Aalto, P.; Aaltonen, H.; Levula, J.; Siivola, E.; Kulmala, M.; Bäck, J.

2013-11-01

Estimates of volatile organic compound (VOC) emissions from forests are based on the assumption that foliage has a steady emission potential over its lifetime, and that emissions are mainly modified by short term variations in light and temperature. However, in many field studies this has been challenged, and high emissions and atmospheric concentrations have been measured during periods of low biological activity such as in springtime. We conducted measurements during three years, using an online gas-exchange monitoring system to observe volatile organic emissions from a mature (1 yr old) and a growing Scots pine shoot. The emission rates of organic vapours (monoterpenes, methyl butenol (MBO), acetone and methanol) from vegetative buds of Scots pine during the dehardening and rapid shoot growth stages were one to two orders of magnitude higher than those from mature foliage. The normally assumed temperature dependency was not sufficient to explain the variations in emission rates during spring. The diurnal emission pattern of growing shoots differed from the diurnal cycle in temperature as well as from the diurnal emission pattern of mature shoots, which may be related to processes involved in shoot or needle elongation. Our findings imply that global estimations of monoterpene emission rates from forests are in need of revision, and that the physiological state of the plants should be taken into account when emissions of the reactive gases such as monoterpenes are estimated. The significant interannual variation in emission rates, related to changes in plant metabolic activity, has important implications to the aerosol precursor concentrations and chemical reactions in atmosphere, and potentially offers an explanation for the frequent aerosol formation events in spring.

Actively heated high-resolution fiber-optic-distributed temperature sensing to quantify streambed flow dynamics in zones of strong groundwater upwelling

USGS Publications Warehouse

Briggs, Martin A.; Buckley, Sean F.; Bagtzoglou, Amvrossios C.; Werkema, Dale D.; Lane, John W.

2016-01-01

Zones of strong groundwater upwelling to streams enhance thermal stability and moderate thermal extremes, which is particularly important to aquatic ecosystems in a warming climate. Passive thermal tracer methods used to quantify vertical upwelling rates rely on downward conduction of surface temperature signals. However, moderate to high groundwater flux rates (>−1.5 m d−1) restrict downward propagation of diurnal temperature signals, and therefore the applicability of several passive thermal methods. Active streambed heating from within high-resolution fiber-optic temperature sensors (A-HRTS) has the potential to define multidimensional fluid-flux patterns below the extinction depth of surface thermal signals, allowing better quantification and separation of local and regional groundwater discharge. To demonstrate this concept, nine A-HRTS were emplaced vertically into the streambed in a grid with ∼0.40 m lateral spacing at a stream with strong upward vertical flux in Mashpee, Massachusetts, USA. Long-term (8–9 h) heating events were performed to confirm the dominance of vertical flow to the 0.6 m depth, well below the extinction of ambient diurnal signals. To quantify vertical flux, short-term heating events (28 min) were performed at each A-HRTS, and heat-pulse decay over vertical profiles was numerically modeled in radial two dimension (2-D) using SUTRA. Modeled flux values are similar to those obtained with seepage meters, Darcy methods, and analytical modeling of shallow diurnal signals. We also observed repeatable differential heating patterns along the length of vertically oriented sensors that may indicate sediment layering and hyporheic exchange superimposed on regional groundwater discharge.

Cluster analysis of intradiurnal holm oak pollen cycles at peri-urban and rural sampling sites in southwestern Spain

NASA Astrophysics Data System (ADS)

Hernández-Ceballos, M. A.; García-Mozo, H.; Galán, C.

2015-08-01

The impact of regional and local weather and of local topography on intradiurnal variations in airborne pollen levels was assessed by analysing bi-hourly holm oak ( Quercus ilex subsp. ballota (Desf.) Samp.) pollen counts at two sampling stations located 40 km apart, in southwestern Spain (Cordoba city and El Cabril nature reserve) over the period 2010-2011. Pollen grains were captured using Hirst-type volumetric spore traps. Analysis of regional weather conditions was based on the computation of backward trajectories using the HYSPLIT model. Sampling days were selected on the basis of phenological data; rainy days were eliminated, as were days lying outside a given range of percentiles (P95-P5). Analysis of cycles for the study period, as a whole, revealed differences between sampling sites, with peak bi-hourly pollen counts at night in Cordoba and at midday in El Cabril. Differences were also noted in the influence of surface weather conditions (temperature, relative humidity and wind). Cluster analysis of diurnal holm oak pollen cycles revealed the existence of five clusters at each sampling site. Analysis of backward trajectories highlighted specific regional air-flow patterns associated with each site. Findings indicated the contribution of both nearby and distant pollen sources to diurnal cycles. The combined use of cluster analysis and meteorological analysis proved highly suitable for charting the impact of local weather conditions on airborne pollen-count patterns. This method, and the specific tools used here, could be used not only to study diurnal variations in counts for other pollen types and in other biogeographical settings, but also in a number of other research fields involving airborne particle transport modelling, e.g. radionuclide transport in emergency preparedness exercises.

Cluster analysis of intradiurnal holm oak pollen cycles at peri-urban and rural sampling sites in southwestern Spain.

PubMed

Hernández-Ceballos, M A; García-Mozo, H; Galán, C

2015-08-01

The impact of regional and local weather and of local topography on intradiurnal variations in airborne pollen levels was assessed by analysing bi-hourly holm oak (Quercus ilex subsp. ballota (Desf.) Samp.) pollen counts at two sampling stations located 40 km apart, in southwestern Spain (Cordoba city and El Cabril nature reserve) over the period 2010-2011. Pollen grains were captured using Hirst-type volumetric spore traps. Analysis of regional weather conditions was based on the computation of backward trajectories using the HYSPLIT model. Sampling days were selected on the basis of phenological data; rainy days were eliminated, as were days lying outside a given range of percentiles (P95-P5). Analysis of cycles for the study period, as a whole, revealed differences between sampling sites, with peak bi-hourly pollen counts at night in Cordoba and at midday in El Cabril. Differences were also noted in the influence of surface weather conditions (temperature, relative humidity and wind). Cluster analysis of diurnal holm oak pollen cycles revealed the existence of five clusters at each sampling site. Analysis of backward trajectories highlighted specific regional air-flow patterns associated with each site. Findings indicated the contribution of both nearby and distant pollen sources to diurnal cycles. The combined use of cluster analysis and meteorological analysis proved highly suitable for charting the impact of local weather conditions on airborne pollen-count patterns. This method, and the specific tools used here, could be used not only to study diurnal variations in counts for other pollen types and in other biogeographical settings, but also in a number of other research fields involving airborne particle transport modelling, e.g. radionuclide transport in emergency preparedness exercises.

Food reward without a timing component does not alter the timing of activity under positive energy balance.

PubMed

van der Vinne, V; Akkerman, J; Lanting, G D; Riede, S J; Hut, R A

2015-09-24

Circadian clocks drive daily rhythms in physiology and behavior which allow organisms to anticipate predictable daily changes in the environment. In most mammals, circadian rhythms result in nocturnal activity patterns although plasticity of the circadian system allows activity patterns to shift to different times of day. Such plasticity is seen when food access is restricted to a few hours during the resting (light) phase resulting in food anticipatory activity (FAA) in the hours preceding food availability. The mechanisms underlying FAA are unknown but data suggest the involvement of the reward system and homeostatic regulation of metabolism. We previously demonstrated the isolated effect of metabolism by inducing diurnality in response to energetic challenges. Here the importance of reward timing in inducing daytime activity is assessed. The daily activity distribution of mice earning palatable chocolate at their preferred time by working in a running wheel was compared with that of mice receiving a timed palatable meal at noon. Mice working for chocolate (WFC) without being energetically challenged increased their total daily activity but this did not result in a shift to diurnality. Providing a chocolate meal at noon each day increased daytime activity, identifying food timing as a factor capable of altering the daily distribution of activity and rest. These results show that timing of food reward and energetic challenges are both independently sufficient to induce diurnality in nocturnal mammals. FAA observed following timed food restriction is likely the result of an additive effect of distinct regulatory pathways activated by energetic challenges and food reward. Copyright © 2015 IBRO. Published by Elsevier Ltd. All rights reserved.

Diurnal and seasonal changes in stem increment and water use by yellow poplar trees in response to environmental stress.

PubMed

McLaughlin, Samuel B; Wullschleger, Stan D; Nosal, Miloslav

2003-11-01

To evaluate indicators of whole-tree physiological responses to climate stress, we determined seasonal, daily and diurnal patterns of growth and water use in 10 yellow poplar (Liriodendron tulipifera L.) trees in a stand recently released from competition. Precise measurements of stem increment and sap flow made with automated electronic dendrometers and thermal dissipation probes, respectively, indicated close temporal linkages between water use and patterns of stem shrinkage and swelling during daily cycles of water depletion and recharge of extensible outer-stem tissues. These cycles also determined net daily basal area increment. Multivariate regression models based on a 123-day data series showed that daily diameter increments were related negatively to vapor pressure deficit (VPD), but positively to precipitation and temperature. The same model form with slight changes in coefficients yielded coefficients of determination of about 0.62 (0.57-0.66) across data subsets that included widely variable growth rates and VPDs. Model R2 was improved to 0.75 by using 3-day running mean daily growth data. Rapid recovery of stem diameter growth following short-term, diurnal reductions in VPD indicated that water stored in extensible stem tissues was part of a fast recharge system that limited hydration changes in the cambial zone during periods of water stress. There were substantial differences in the seasonal dynamics of growth among individual trees, and analyses indicated that faster-growing trees were more positively affected by precipitation, solar irradiance and temperature and more negatively affected by high VPD than slower-growing trees. There were no negative effects of ozone on daily growth rates in a year of low ozone concentrations.

Characterizing CH4 and N2O emissions from an intensive dairy operation in summer and fall in China

NASA Astrophysics Data System (ADS)

Zhu, Gaodi; Ma, Xiaoyuan; Gao, Zhiling; Ma, Wenqi; Li, Jianguo; Cai, Zhenjiang

2014-02-01

Evaluation of the global warming potential of the dairy industry both in China and globally necessitates reliable characterization of CH4 and N2O emissions. However, CH4 and N2O emissions from dairy operations differ with feeds, herd structures and manure management practices, and the lack of N2O and CH4 emission measurements for China, especially for intensive dairy operations, causes substantial uncertainty in accounting for GHGs from dairy operation both in China and globally. In this study, CH4 and N2O emissions during summer to fall period from an intensive feedlot in China were characterized to fill the data gap. The diurnal CH4 emission patterns for milking cows and heifers were driven by the feeding activities and the diurnal N2O patterns by the diurnal changes in temperature. The CH4 emission rates of 397 g head-1 d-1 (23.63 L CH4 kg-1 milk) (in summer) and 279 g head-1 d-1 (in fall) for milking cows and heifers accounted for 5.17% and 7.68% of their daily gross energy intakes, whereas the N2O emission rates of 36.7 g head-1 d-1 (0.85 L N2O kg-1 milk) for milking cows and 24.2 g head-1 d-1 for heifers accounted for 4.25% and 6.86% of the daily feed N intake. The CH4 conversion factor and CH4 emission intensity in the measurement season for intensive dairy operations in China are lower than those for collective operations in China, and the CH4 emission intensity is similar to those in developed countries.

2010 weather and aeolian sand-transport data from the Colorado River corridor, Grand Canyon, Arizona

USGS Publications Warehouse

Dealy, Timothy P.; East, Amy E.; Fairley, Helen C.

2014-01-01

Measurements of weather parameters and aeolian sand transport were made in 2010 near selected archeological sites in the Colorado River corridor through Grand Canyon, Arizona. Data collected in 2010 indicate event- and seasonal-scale variations in rainfall, wind, temperature, humidity, and barometric pressure. Differences in weather patterns between 2009 and 2010 included a slightly later spring windy season, greater spring precipitation and annual rainfall totals, and a later onset and length of the reduced diurnal barometric-pressure fluctuations commonly associated with summer monsoon conditions. The increase in spring precipitation was consistent with the 2010 spring El Niño conditions compared to the 2009 spring La Niña conditions, whereas the subsequent transition to an El Niño-Southern Oscillation neutral phase appeared to delay the reduction in diurnal barometric fluctuations.

Plasticity of crassulacean acid metabolism at subtropical latitudes: a pineapple case study.

PubMed

Rainha, Nuno; Medeiros, Violante P; Câmara, Mariana; Faustino, Hélder; Leite, João P; Barreto, Maria do Carmo; Cruz, Cristina; Pacheco, Carlos A; Ponte, Duarte; Bernardes da Silva, Anabela

2016-01-01

Plants with the crassulacean acid metabolism (CAM) express high-metabolic plasticity, to adjust to environmental stresses. This article hypothesizes that irradiance and nocturnal temperatures are the major limitations for CAM at higher latitudes such as the Azores (37°45'N). Circadian CAM expression in Ananas comosus L. Merr. (pineapple) was assessed by the diurnal pattern of leaf carbon fixation into l-malate at the solstices and equinoxes, and confirmed by determining maximal phosphoenolpyruvate carboxylase (PEPC) activity in plant material. Metabolic adjustments to environmental conditions were confirmed by gas exchange measurements, and integrated with environmental data to determine CAM's limiting factors: light and temperature. CAM plasticity was observed at the equinoxes, under similar photoperiods, but different environmental conditions. In spring, CAM expression was similar between vegetative and flowering plants, while in autumn, flowering (before anthesis) and fructifying (with fully developed fruit before ripening) plants accumulated more l-malate. Below 100 µmol m(-2) s(-1) , CAM phase I was extended, reducing CAM phase III during the day. Carbon fixation inhibition may occur by two major pathways: nocturnal temperature (<15°C) inhibiting PEPC activity and l-malate accumulation; and low irradiance influencing the interplay between CAM phase I and III, affecting carboxylation and decarboxylation. Both have important consequences for plant development in autumn and winter. Observations were confirmed by flowering time prediction using environmental data, emphasizing that CAM expression had a strong seasonal regulation due to a complex network response to light and temperature, allowing pineapple to survive in environments not suitable for high productivity. © 2015 Scandinavian Plant Physiology Society.

Internal and external control of net photosynthesis and stomatal conductance of mature eastern white pine (Pinus strobus)

Treesearch

Chris A. Maier; R.O. Teskey

1992-01-01

Leaf gas exchange and water relations were monitored in the upper canopy of two 25 m tall eastern white pine (Pinus strobus L.) trees over two consecutive growing seasons (1986 and 1987). Examination of the seasonal and diurnal patterns of net photosynthesis and leaf conductance showed that both internal and external (environmental) factors were...

Children's Transition to School: Relationships between Preschool Attendance, Cortisol Patterns, and Effortful Control

ERIC Educational Resources Information Center

Hall, James; Lindorff, Ariel

2017-01-01

Aims: To determine whether distinct trends can exist in children's diurnal cortisol slopes as they transition to school, and the extent to which these trends relate to preschool attendance and/or exerted effortful control. Method: A secondary analysis of the anonymised data gathered for the UK Transition to School Study was carried out. 105…

Analysis of seasonal, diurnal, and noctural growth patterns of young longleaf pine

Treesearch

John C. Gilbert; Ralph S. Meldahl; John S. Kush; William D. Boyer

2006-01-01

Forty longleaf pine (Pinus palustris Mill.) trees initially ranging from 1 to 1.5 m in height were measured on the Escambia Experimental Forest from 1969 through 1980. The trees were evenly divided between two soil types. From 1969 through 1970, height and diameter measurements were recorded one to four times weekly during the growing seasons and...

Climate change and hydrology in the Blue Mountains [Chapter 3

Treesearch

Caty F. Clifton; Kate T. Day; Kathie Dello; Gordon E. Grant; Jessica E. Halofsky; Daniel J. Isaak; Charles H. Luce; Mohammad Safeeq; Brian P. Staab; John Stevenson

2017-01-01

The dominant influences on climatic patterns in the Pacific Northwest are the Pacific Ocean and the Cascade Range. The diurnal temperature range is higher east of the Cascade crest, further inland from the Pacific Ocean. More precipitation falls west of the Cascade Mountains crest, and a strong rain shadow greatly reduces precipitation east of the crest. The southern...

Diurnal expression of clock genes in pineal gland and brain and plasma levels of melatonin and cortisol in Atlantic salmon parr and smolts.

PubMed

Huang, Tien-sheng; Ruoff, Peter; Fjelldal, Per G

2010-10-01

In Atlantic salmon, the preadaptation to a marine life, i.e., parr-smolt transformation, and melatonin production in the pineal gland are regulated by the photoperiod. However, the clock genes have never been studied in the pineal gland of this species. The aim of the present study was to describe the diurnal expression of clock genes (Per1-like, Cry2, and Clock) in the pineal gland and brain of Atlantic salmon parr and smolts in freshwater, as well as plasma levels of melatonin and cortisol. By employing an out-of-season smolt production model, the parr-smolt transformation was induced by subjecting triplicate groups of parr to 6 wks (wks 0 to 6) under a 12 h:12 h light-dark (LD) regime followed by 6 wks (wks 6 to 12) of continuous light (LL). The measured clock genes in both pineal gland and brain and the plasma levels of melatonin and cortisol showed significant daily variations in parr under LD in wk 6, whereas these rhythms were abolished in smolts under LL in wk 12. In parr, the pineal Per1-like and Cry2 expression peaked in the dark phase, whereas the pineal Clock expression was elevated during the light phase. Although this study presents novel findings on the clock gene system in the teleost pineal gland, the role of this system in the regulation of smoltification needs to be studied in more detail.

Circadian Rhythms Differ between Sexes and Closely Related Species of Nasonia Wasps

PubMed Central

Bertossa, Rinaldo C.; van Dijk, Jeroen; Diao, Wenwen; Saunders, David; Beukeboom, Leo W.; Beersma, Domien G. M.

2013-01-01

Activity rhythms in 24 h light-dark cycles, constant darkness, and constant light conditions were analyzed in four different Nasonia species for each sex separately. Besides similarities, clear differences are evident among and within Nasonia species as well as between sexes. In all species, activity in a light-dark cycle is concentrated in the photophase, typical for diurnal organisms. Contrary to most diurnal insect species so far studied, Nasonia follows Aschoff's rule by displaying long (>24 h) internal rhythms in constant darkness but short (<24 h) in constant light. In constant light, N. vitripennis males display robust circadian activity rhythms, whereas females are usually arrhythmic. In contrast to other Nasonia species, N. longicornis males display anticipatory activity, i.e. activity shortly before light-on in a light-dark cycle. As expected, N. oneida shows activity patterns similar to those of N. giraulti but with important differences in key circadian parameters. Differences in circadian activity patterns and parameters between species may reflect synchronization of specific life-history traits to environmental conditions. Scheduling mating or dispersion to a specific time of the day could be a strategy to avoid interspecific hybridization in Nasonia species that live in sympatry. PMID:23555911

Numerical Study of Winter Diurnal Convection Over the City of Krasnoyarsk: Effects of Non-freezing River, Undulating Fog and Steam Devils

NASA Astrophysics Data System (ADS)

Hrebtov, M.; Hanjalić, K.

2017-06-01

We performed a numerical simulation of penetrative convection of an inversion-topped weakly stratified atmospheric boundary layer over urban terrain with a strong localized source of heat and moisture. With some simplifications, the case mimics the real environment of the Krasnoyarsk region in Russia where the non-freezing river Yenisei acts as a thermal and humidity source during winter, generating an undulating fog pattern along the river accompanied with scattered `steam devils'. An idealized full diurnal cycle was simulated using an unsteady Reynolds-averaged Navier-Stokes (RANS) three-equation algebraic flux model and the novel buoyancy-accounting functions for treating the ground boundary conditions. The results show a significant effect of the river on the net temperature and moisture distribution. The localized heat and moisture source leads to strong horizontal convection and marked non-uniformity of humidity concentration in the air. An interplay of several distinct large-scale vortex systems leads to a wavy pattern of moisture plumes over the river. The simulations deal with rare natural phenomena and show the capability of the RANS turbulence closure to capture the main features of flow and scalar fields on an affordable, relatively coarse, computational grid.

Technical note: Differences in the diurnal pattern of soil respiration under adjacent Miscanthus × giganteus and barley crops reveal potential flaws in accepted sampling strategies

NASA Astrophysics Data System (ADS)

Ben Keane, J.; Ineson, Phil

2017-03-01

For convenience, measurements used to compare soil respiration (Rs) from different land uses, crops or management practices are often made between 09:00 and 16:00 UTC, convenience which is justified by an implicit assumption that Rs is largely controlled by temperature. Three months of continuous data presented here show distinctly different diurnal patterns of Rs between barley (Hordeum vulgare) and Miscanthus × giganteus (Miscanthus) grown on adjacent fields. Maximum Rs in barley occurred during the afternoon and correlated with soil temperature, whereas in Miscanthus after an initial early evening decline, Rs increased above the daily average during the night and in July maximum daily rates of Rs were seen at 22:00 and was significantly correlated with earlier levels of solar radiation, probably due to delays in translocation of recent photosynthate. Since the time of the daily mean Rs in Miscanthus occurred when Rs in the barley was 40 % greater than the daily mean, it is vital to select appropriate times to measure Rs especially if only single daily measurements are to be made.

Proteomic identification of rhythmic proteins in rice seedlings.

PubMed

Hwang, Heeyoun; Cho, Man-Ho; Hahn, Bum-Soo; Lim, Hyemin; Kwon, Yong-Kook; Hahn, Tae-Ryong; Bhoo, Seong Hee

2011-04-01

Many aspects of plant metabolism that are involved in plant growth and development are influenced by light-regulated diurnal rhythms as well as endogenous clock-regulated circadian rhythms. To identify the rhythmic proteins in rice, periodically grown (12h light/12h dark cycle) seedlings were harvested for three days at six-hour intervals. Continuous dark-adapted plants were also harvested for two days. Among approximately 3000 reproducible protein spots on each gel, proteomic analysis ascertained 354 spots (~12%) as light-regulated rhythmic proteins, in which 53 spots showed prolonged rhythm under continuous dark conditions. Of these 354 ascertained rhythmic protein spots, 74 diurnal spots and 10 prolonged rhythmic spots under continuous dark were identified by MALDI-TOF MS analysis. The rhythmic proteins were functionally classified into photosynthesis, central metabolism, protein synthesis, nitrogen metabolism, stress resistance, signal transduction and unknown. Comparative analysis of our proteomic data with the public microarray database (the Plant DIURNAL Project) and RT-PCR analysis of rhythmic proteins showed differences in rhythmic expression phases between mRNA and protein, suggesting that the clock-regulated proteins in rice are modulated by not only transcriptional but also post-transcriptional, translational, and/or post-translational processes. 2011 Elsevier B.V. All rights reserved.

Melatonin and Pancreatic Islets: Interrelationships between Melatonin, Insulin and Glucagon

PubMed Central

Peschke, Elmar; Bähr, Ina; Mühlbauer, Eckhard

2013-01-01

The pineal hormone melatonin exerts its influence in the periphery through activation of two specific trans-membrane receptors: MT1 and MT2. Both isoforms are expressed in the islet of Langerhans and are involved in the modulation of insulin secretion from β-cells and in glucagon secretion from α-cells. De-synchrony of receptor signaling may lead to the development of type 2 diabetes. This notion has recently been supported by genome-wide association studies identifying particularly the MT2 as a risk factor for this rapidly spreading metabolic disturbance. Since melatonin is secreted in a clearly diurnal fashion, it is safe to assume that it also has a diurnal impact on the blood-glucose-regulating function of the islet. This factor has hitherto been underestimated; the disruption of diurnal signaling within the islet may be one of the most important mechanisms leading to metabolic disturbances. The study of melatonin–insulin interactions in diabetic rat models has revealed an inverse relationship: an increase in melatonin levels leads to a down-regulation of insulin secretion and vice versa. Elucidation of the possible inverse interrelationship in man may open new avenues in the therapy of diabetes. PMID:23535335

Expression of FcFT1, a FLOWERING LOCUS T-like gene, is regulated by light and associated with inflorescence differentiation in fig (Ficus carica L.).

PubMed

Ikegami, Hidetoshi; Nogata, Hitoshi; Inoue, Yoshiaki; Himeno, Shuichi; Yakushiji, Hiroshi; Hirata, Chiharu; Hirashima, Keita; Mori, Masashi; Awamura, Mitsuo; Nakahara, Takao

2013-12-16

Because the floral induction occurs in many plants when specific environmental conditions are satisfied, most plants bloom and bear fruit during the same season each year. In fig, by contrast, the time interval during which inflorescence (flower bud, fruit) differentiation occurs corresponds to the shoot elongation period. Fig trees thus differ from many species in their reproductive growth characteristics. To date, however, the molecular mechanisms underlying this unorthodox physiology of floral induction and fruit setting in fig trees have not been elucidated. We isolated a FLOWERING LOCUS T (FT)-like gene from fig and examined its function, characteristics, and expression patterns. The isolated gene, F. carica FT (FcFT1), is single copy in fig and shows the highest similarity at the amino acid level (93.1%) to apple MdFT2. We sequenced its upstream region (1,644 bp) and identified many light-responsive elements. FcFT1 was mainly expressed in leaves and induced early flowering in transgenic tobacco, suggesting that FcFT1 is a fig FT ortholog. Real-time reverse-transcription PCR analysis revealed that FcFT1 mRNA expression occurred only in leaves at the lower nodes, the early fruit setting positions. mRNA levels remained a constant for approximately 5 months from spring to autumn, corresponding almost exactly to the inflorescence differentiation season. Diurnal variation analysis revealed that FcFT1 mRNA expression increased under relative long-day and short-day conditions, but not under continuous darkness. These results suggest that FcFT1 activation is regulated by light conditions and may contribute to fig's unique fruit-setting characteristics.

Diurnal variation in the functioning of cowpea nodules.

PubMed

Rainbird, R M; Atkins, C A; Pate, J S

1983-06-01

Nitrogenase (EC 1.7.99.2) activity of nodules of cowpea (Vigna unguiculata [L.] Walp), maintained under conditions of a 12-hour day at 30 degrees C and 800 to 1,000 microeinsteins per square meter per second (photosynthetically active radiation) and a 12-hour night at 20 degrees C, showed a marked diurnal variation with the total electron flux through the enzyme at night being 60% of that in the photoperiod. This diurnal pattern was, however, due to changes in hydrogen evolution. The rate of nitrogen fixation, measured by short-term (15)N(2) assimilation or estimated from the difference in hydrogen evolution in air or Ar:O(2) (80:20; v/v), showed no diurnal variation. Carbon dioxide released from nodules showed a diurnal variation synchronized with that of nitrogenase functioning and, as a consequence, the apparent ;respiratory cost' of nitrogen fixation in the photoperiod was almost double that at night (9.74 +/- 0.38 versus 5.70 +/- 0.90 moles CO(2) evolved per mole N(2) fixed). Separate carbon and nitrogen balances constructed for nodules during the photoperiod and dark period showed that, at night, nodule functioning required up to 40% less carbohydrate to achieve the same level of nitrogen fixation as during the photoperiod (2.4 versus 1.4 moles hexose per mole N(2) fixed).Stored reserves of nonstructural carbohydrate of the nodule only partly satisfied the requirement for carbon at night, and fixation was dependent on continued import of translocated assimilates at all times. Measurements of the soluble nitrogen pools of the nodule together with (15)N studies indicated that, both during the day and night, nitrogenous products of fixation were effectively translocated to all organs of the host plant despite low rates of transpiration at night. Reduced fluxes of water through the plant at night were apparently counteracted by increased concentration of nitrogen, especially as ureides, in the xylem stream.

[Spatial variation in diurnal courses of stem temperature of Betula platyphylla and Fraxinus mandshurica and its influencing factors].

PubMed

Li, Yu Ran; Wang, Xing Chang; Wang, Chuan Kuan; Liu, Fan; Zhang, Quan Zhi

2017-10-01

Plant temperature is an important parameter for estimating energy balance and vegetation respiration of forest ecosystem. To examine spatial variation in diurnal courses of stem temperatures (T s ) and its influencing factors, we measured the T s with copper constantan thermocouples at different depths, heights and azimuths within the stems of two broadleaved tree species with contrasting bark and wood properties, Betula platyphylla and Fraxinus mandshurica. The results showed that the monthly mean diurnal courses of the T s largely followed that of air temperature with a 'sinusoi dal' pattern, but the T s lagged behind the air temperature by 0 h at the stem surface to 4 h at 6 cm depth. The daily maximal values and ranges of the diurnal course of T s decreased gradually with increasing measuring depth across the stem and decreasing measuring height along the stem. The circumferential variation in T s was marginal, with slightly higher daily maximal values in the south and west directions during the daytime of the dormant season. Differences in thermal properties (i.e. , specific heat capacity and thermal conductivity) of both bark and wood tissue between the two species contributed to the inter specific variations in the radial variation in T s through influencing the heat exchange between the stem surface and ambient air as well as heat diffusion within the stem. The higher reflectance of the bark of B. platyphylla decreased the influence of solar radiation on T s . The stepwise regression showed that the diurnal courses of T s could be well predicted by the environmental factors (R 2 > 0.85) with an order of influence ranking as air temperature > water vapor pressure > net radiation > wind speed. It is necessary to take the radial, vertical and inter specific varia-tions in T s into account when estimating biomass heat storage and stem CO2 efflux.

Body temperature, activity patterns, and hunting in free-living cheetah: biologging reveals new insights.

PubMed

Hetem, Robyn S; Mitchell, Duncan; de Witt, Brenda A; Fick, Linda G; Maloney, Shane K; Meyer, Leith C R; Fuller, Andrea

2018-05-31

As one of the few felids that is predominantly diurnal, cheetahs (Acinonyx jubatus Von Schreber, 1775) can be exposed to high heat loads in their natural habitat. Little is known about long-term patterns of body temperature and activity (including hunting) in cheetahs because long-term concurrent measurements of body temperature and activity never have been reported for cheetahs, or indeed for any free-living felid. We report here body temperature and locomotor activity measured with implanted data loggers over seven months in five free-living cheetahs in Namibia. Air temperature ranged from a maximum of 39ºC in summer to -2ºC in winter. Cheetahs had higher (∼0.4 ºC) maximum 24h body temperatures, later acrophase (∼1 h), with larger fluctuations in the range of the 24h body temperature rhythm (∼0.4 ºC) during a hot-dry period than during a cool-dry period, but maintained homeothermy irrespective of the climatic conditions. As ambient temperatures increased, the cheetahs shifted from a diurnal to a crepuscular activity pattern, with reduced activity between 9:00 and 15:00 and increased nocturnal activity. The timing of hunts followed the general pattern of activity; the cheetahs hunted when they were on the move. Cheetahs hunted if an opportunity presented itself, on occasion they hunted in the midday heat or in total darkness (new moon). Biologging revealed insights into cheetah biology that are not accessible by traditional observer-based techniques. This article is protected by copyright. All rights reserved. This article is protected by copyright. All rights reserved.

Tectonic Processes on Europa: Tidal Stresses, Mechanical Response, and Visible Features

USGS Publications Warehouse

Greenberg, R.; Geissler, P.; Hoppa, G.; Tufts, B.R.; Durda, D.D.; Pappalardo, R.; Head, J.W.; Greeley, R.; Sullivan, R.; Carr, M.H.

1998-01-01

Europa's orbital eccentricity, driven by the resonance with Io and Ganymede, results in "diurnal" tides (3.5-day period) and possibly in nonsynchronous rotation. Both diurnal variation and nonsynchronous rotation can create significant stress fields on Europa's surface, and both effects may produce cracking. Patterns and time sequences of apparent tectonic features on Europa include lineaments that correlate with both sources of stress, if we take into account nonsynchronous rotation, after initial crack formation, by amounts ranging up to several tens of degrees. For example, the crosscutting time sequence of features in the Cadmus and Minos Linea region is consistent with a combined diurnal and nonsynchronous tensile-stress field, as it evolves during tens of degrees of nonsynchronous rotation. Constraints on the rotation rate from comparing Voyager and Galileo images show that significant rotation requires 104yr, but could be fast enough to have allowed significant rotation since the last global resurfacing, even if such resurfacing was as recent as a few million years ago. Once cracking is initiated, diurnal tides work cracks so that they open and close daily. Although the daily effect is small, over 105yr double ridges could plausibly be built along the cracks with sizes and morphologies consistent with observed structures, according to a model in which underlying liquid water fills the open cracks, partially freezes, and is extruded during the daily closing of the cracks. Thus, several lines of observational and theoretical evidence can be integrated if we assume nonsynchronous rotation and the existence of a liquid water layer. ?? 1998 Academic Press.

Simulating the convective precipitation diurnal cycle in a North American scale convection-permitting model

NASA Astrophysics Data System (ADS)

Scaff, L.; Li, Y.; Prein, A. F.; Liu, C.; Rasmussen, R.; Ikeda, K.

2017-12-01

A better representation of the diurnal cycle of convective precipitation is essential for the analysis of the energy balance and the water budget components such as runoff, evaporation and infiltration. Convection-permitting regional climate modeling (CPM) has been shown to improve the models' performance of summer precipitation, allowing to: (1) simulate the mesoscale processes in more detail and (2) to provide more insights in future changes in convective precipitation under climate change. In this work we investigate the skill of the Weather Research and Forecast model (WRF) in simulating the summer precipitation diurnal cycle over most of North America. We use 4 km horizontal grid spacing in a 13-years long current and future period. The future scenario is assuming no significant changes in large-scale weather patterns and aims to answer how the weather of the current climate would change if it would reoccur at the end of the century under a high-end emission scenario (Pseudo Global Warming). We emphasize on a region centered on the lee side of the Canadian Rocky Mountains, where the summer precipitation amount shows a regional maximum. The historical simulations are capable to correctly represent the diurnal cycle. At the lee-side of the Canadian Rockies the increase in the convective available potential energy as well as pronounced low-level moisture flux from the southeast Prairies explains the local maximum in summer precipitation. The PGW scenario shows an increase in summer precipitation amount and intensity in this region, consistently with a stronger source of moisture and convective energy.

Effects of aniracetam on impaired sleep patterns in stroke-prone spontaneously hypertensive rats.

PubMed

Kimura, M; Okano, S; Inoué, S

2000-06-01

The aim of the present study was to determine the pattern of sleep disturbances and the effects on sleep of aniracetam, a cognitive enhancer, in stroke-prone spontaneously hypertensive rats (SHRSP). Compared with normotensive control rats, SHRSP exhibited an impaired sleep pattern characterized by suppressed diurnal rapid eye movement (REM) sleep and excessive nocturnal non-REM sleep. At a dose of 30 mg/kg per day p.o., aniracetam increased REM sleep in the light period after administration for 5 consecutive days. Consequently, suppressed REM sleep in SHRSP was restored by repeated treatment with aniracetam. Aniracetam could be useful in improving REM sleep impairment associated with vascular dementia.

Global strike-slip fault distribution on Enceladus reveals mostly left-lateral faults

NASA Astrophysics Data System (ADS)

Martin, E. S.; Kattenhorn, S. A.

2013-12-01

Within the outer solar system, normal faults are a dominant tectonic feature; however, strike-slip faults have played a role in modifying the surfaces of many icy bodies, including Europa, Ganymede, and Enceladus. Large-scale tectonic deformation in icy shells develops in response to stresses caused by a range of mechanisms including polar wander, despinning, volume changes, orbital recession/decay, diurnal tides, and nonsynchronous rotation (NSR). Icy shells often preserve this record of tectonic deformation as patterns of fractures that can be used to identify the source of stress responsible for creating the patterns. Previously published work on Jupiter's moon Europa found that right-lateral strike-slip faults predominantly formed in the southern hemisphere and left-lateral strike-slip faults in the northern hemisphere. This pattern suggested they were formed in the past by stresses induced by diurnal tidal forcing, and were then rotated into their current longitudinal positions by NSR. We mapped the distribution of strike-slip faults on Enceladus and used kinematic indicators, including tailcracks and en echelon fractures, to determine their sense of slip. Tailcracks are secondary fractures that form as a result of concentrations of stress at the tips of slipping faults with geometric patterns dictated by the slip sense. A total of 31 strike-slip faults were identified, nine of which were right-lateral faults, all distributed in a seemingly random pattern across Enceladus's surface, in contrast to Europa. Additionally, there is a dearth of strike-slip faults within the tectonized terrains centered at 90°W and within the polar regions north and south of 60°N and 60°S, respectively. The lack of strike-slip faults in the north polar region may be explained, in part, by limited data coverage. The south polar terrain (SPT), characterized by the prominent tiger stripes and south polar dichotomy, yielded no discrete strike-slip faults. This does not suggest that the SPT is devoid of shear: previous work has indicated that the tiger stripes may be undergoing strike-slip motions and the surrounding regions may be experiencing shear. The fracture patterns and geologic activity within the SPT have been previously documented to be the result of stresses induced by both NSR and diurnal tidal deformation. As these same mechanisms are the main controls on strike-slip fault patterns on Europa, the lack of a match between strike-slip patterns on Europa and Enceladus is intriguing. The pattern of strike-slip faults on Enceladus suggests a different combination of stress mechanisms is required to produce the observed distributions. We will present models of global stress mechanisms to consider how the global-scale pattern of strike-slip faults on Enceladus may have been produced. This problem will be investigated further by measuring the angles at which tailcracks have formed on Enceladus. Tailcracks produced by simple shear form at 70.5° to the fault. Any deviation from this angle indicates some ratio of concomitant shear and dilation, which may provide insights into elucidating the stresses controlling strike-slip formation on Enceladus.

Large variations in diurnal and seasonal patterns of sap flux among Aleppo pine trees in semi-arid forest reflect tree-scale hydraulic adjustments

NASA Astrophysics Data System (ADS)

Preisler, Yakir; Tatarinov, Fyodor; Rohatyn, Shani; Rotenberg, Eyal; Grünzweig, José M.; Klein, Tamir; Yakir, Dan

2015-04-01

Adjustments and adaptations of trees to drought vary across different biomes, species and habitats, with important implications for tree mortality and forest dieback associated with global climate change. The aim of this study was to investigate possible links between the patterns of variations in water flux dynamics and drought resistance in Aleppo pine (Pinus halepensis) trees in a semi-arid stand (Yatir forest, Israel). We measured sap flow (SF) and variations in stem diameter, complemented with short-term campaigns of leaf-scale measurements of water vapour and CO2 gas exchange, branch water potential and hydraulic conductivity, as well as eddy flux measurements of evapotranspiration (ET) from a permanent flux tower at the site. SF rates were well synchronized with ET, reaching maximum rates during midday in all trees during the rainy season (Dec-Apr). However, during the dry season (May-Nov), the daily trend in the rates of SF greatly varied among trees, allowing classification into three tree classes: 1) trees with SF maximum rate constantly occurring in mid-day (12:00-13:00); 2)trees showing a shift to an early morning SF peak (04:00-06:00); and 3) trees shifting their daily SF peak to the evening (16:00-18:00). This classification did not change during the four years study period, between 2010 and 2014. Checking for correlation of tree parameters as DBH, tree height, crown size, and competition indices with rates of SF, indicated that timing of maximum SF in summer was mainly related to tree size (DBH), when large trees tended to have a later SF maximum. Dendrometer measurements indicated that large trees (high DBH) had maximum daily diameter in the morning during summer and winter, while small trees typically had maximum daily diameter during midday and afternoon in winter and summer, respectively. Leaf-scale transpiration (T) measurements showed typical morning peak in all trees, and another peak in the afternoon in large trees only. Different diurnal curves observed during the dry season, indicated that water potential and hydraulic conductivity values in larger trees restored from midday depression earlier than in smaller ones. The results demonstrate large heterogeneity in the behaviour related to tree water relations among trees of the same species and in the same stand. The combination of diurnal leaf-scale measurements, SF and changes in DBH demonstrated the different strategies of individual trees of different sizes. Large trees with sufficient internal water storage can more freely manipulate their water storage capacity, with reduced dependence on environmental conditions (e.g., morning and afternoon peaks of T). On the other hand, during the dry summer small trees with insufficient internal water storage are strongly restricted by low soil water availability and extreme environmental conditions, which is expressed in only one peak of T, midday to afternoon shift of diurnal DBH maximum, and shift in SF to predawn when soil water potential is highest. Refilling of internal water storage seems to be in the afternoon/evening since T becomes smaller than SF and DBH increases. Reliance on external water availability in small trees might be insufficient during long drought episodes when soil water content decreases below threshold required for extraction by the trees, leading to increased tree mortality in small DBH trees.

Long term monitoring of rock surface temperature and rock cracking in temperate and desert climates

NASA Astrophysics Data System (ADS)

Eppes, M. C.; Warren, K.; Hinson, E.; Dash, L.

2012-12-01

The extent to which diurnal cycling of temperature results in the mechanical breakdown of rock cannot be clearly defined until direct connections between rock surface temperatures and rock cracking are identified under natural conditions. With this goal, we have developed a unique instrumentation system for monitoring spatial (N-, S-, E-, W-, up- and down-facing) and temporal (per minute) temperature variability in natural boulders while simultaneously monitoring cracking via acoustic emission sensors. To date, we have collected 11 and 12 months of data respectively for ~30 cm diameter granite boulders placed in North Carolina (near Charlotte) and New Mexico (Sevilleta National Wildlife Refuge). These data allow us 1) to compare and contrast spatial and temporal trends in surface temperatures of natural boulders at high temporal resolution over unprecedentedly long time scales in two contrasting environments and 2) to make direct correlations between boulder surface temperatures and periods of microcracking as recorded by acoustic emissions in both environments. Preliminary analysis of both data sets indicates that there is no obvious single high or low threshold in surface temperature or rate of surface temperature change (measurable at a per minute scale) beyond which cracking occurs for either locality. For example, for the New Mexico rock, overall rock surface temperatures ranged from -27 C to 54 C throughout the year, and rock surface temperatures during the times of peak cracking event clusters ranged from -14 C to 46 C. The majority of events occur during winter months in North Carolina and in summer in New Mexico. The majority of events occurred in the late afternoon/early evening for both localities, although the overall numbers of cracking events was significantly higher in the New Mexico locality. In both cases, the key temperature factor that appears to most often correlate with cracking is the rate of change of temperature difference across the rock surface. Large clusters of microcracking events commonly occur when the thermal gradient across the rock is rapidly changing, both positively or negatively. In most cases, this condition arises due to periods of rapid temperature change of the rock's upper surface associated with changing cloud cover, increased or decreased wind speed, or sudden rain events that follow sunny periods. As such, it appears that microcracking is often not solely associated with solar-related patterns of diurnal heating and cooling per-sea, but instead associated with weather conditions that lead to abrupt alterations of the diurnal pattern. Thus, the fact that clusters of events occur during specific times of day can be attributed to overall diurnal insolation patterns combined with rapid changes in weather that often occur during specific times of day as well. These data support the interpretation of documented preferential orientations of cracks in a variety of environments as having been formed due to stresses that arise by diurnal heating and cooling during specific times of day. As such, these data provide important inputs for numeric models by our collaborators, B. Hallet and P. Makenzie that seek to determine the exact thermo-mechanical mechanisms that link thermal cycling and rock fracture.

Urinary concentration does not exclusively rely on plasma vasopressin. A study between genders. Gender and diurnal urine regulation.

PubMed

Graugaard-Jensen, C; Hvistendahl, G M; Frøkiaer, J; Bie, P; Djurhuus, J C

2014-09-01

We investigated the influence of gender on the diurnal regulation of urine production with special focus on vasopressin, oxytocin and prostaglandin E2. Fifteen young women in mid-follicular phase and 22 young men (20-33 years) were included. All participants underwent a 24-h circadian inpatient study under standardized conditions for measurements of plasma vasopressin, oxytocin, sodium and osmolality. Urine was fractionally collected for measurements of electrolytes, aquaporin-2 and prostaglandin E2. Plasma vasopressin expressed a diurnal rhythm with a night-time increase in both genders (P < 0.001). The ratio between mean daytime and mean night-time was 1.57 [95% CI: 1.33-1.84] P < 0.001 in men and 1.35 [95% CI: 1.11-1.64] P = 0.002 in women. P-vasopressin was higher in males during the night (P < 0.05). There was no difference in diuresis (P = 0.43), urine osmolality (P = 0.12) or aquaporin-2 excretion (P = 0.80) between genders. We found a trend towards a higher reabsorption of free water in males (P = 0.07). The excretion of prostaglandin E2 was higher in males (P < 0.001). There was no diurnal rhythm in p-oxytocin (P = 0.37) and no correlation to diuresis, urine osmolality or aquaporin-2 excretions. Similar urinary flows and osmolalities are associated with levels of plasma vasopressin and renal PGE2, which are higher in males than in females. Oxytocin does not seem to play a role in the diurnal urine formation, whereas prostaglandin E2 could represent a mediator of the gender difference, not only as a mediator of the vasopressin response, but also as an independent factor. These findings need further elucidation. © 2014 Scandinavian Physiological Society. Published by John Wiley & Sons Ltd.

Central melanopsin projections in the diurnal rodent, Arvicanthis niloticus

PubMed Central

Langel, Jennifer L.; Smale, Laura; Esquiva, Gema; Hannibal, Jens

2015-01-01

The direct effects of photic stimuli on behavior are very different in diurnal and nocturnal species, as light stimulates an increase in activity in the former and a decrease in the latter. Studies of nocturnal mice have implicated a select population of retinal ganglion cells that are intrinsically photosensitive (ipRGCs) in mediation of these acute responses to light. ipRGCs are photosensitive due to the expression of the photopigment melanopsin; these cells use glutamate and pituitary adenylate cyclase-activating polypeptide (PACAP) as neurotransmitters. PACAP is useful for the study of central ipRGC projections because, in the retina, it is found exclusively within melanopsin cells. Little is known about the central projections of ipRGCs in diurnal species. Here, we first characterized these cells in the retina of the diurnal Nile grass rat using immunohistochemistry (IHC). The same basic subtypes of melanopsin cells that have been described in other mammals were present, but nearly 25% of them were displaced, primarily in its superior region. PACAP was present in 87.7% of all melanopsin cells, while 97.4% of PACAP cells contained melanopsin. We then investigated central projections of ipRGCs by examining the distribution of immunoreactive PACAP fibers in intact and enucleated animals. This revealed evidence that these cells project to the suprachiasmatic nucleus, lateral geniculate nucleus (LGN), pretectum, and superior colliculus. This distribution was confirmed with injections of cholera toxin subunit β coupled with Alexa Fluor 488 in one eye and Alexa Fluor 594 in the other, combined with IHC staining of PACAP. These studies also revealed that the ventral and dorsal LGN and the caudal olivary pretectal nucleus receive less innervation from ipRGCs than that reported in nocturnal rodents. Overall, these data suggest that although ipRGCs and their projections are very similar in diurnal and nocturnal rodents, they may not be identical. PMID:26236201

Central melanopsin projections in the diurnal rodent, Arvicanthis niloticus.

PubMed

Langel, Jennifer L; Smale, Laura; Esquiva, Gema; Hannibal, Jens

2015-01-01

The direct effects of photic stimuli on behavior are very different in diurnal and nocturnal species, as light stimulates an increase in activity in the former and a decrease in the latter. Studies of nocturnal mice have implicated a select population of retinal ganglion cells that are intrinsically photosensitive (ipRGCs) in mediation of these acute responses to light. ipRGCs are photosensitive due to the expression of the photopigment melanopsin; these cells use glutamate and pituitary adenylate cyclase-activating polypeptide (PACAP) as neurotransmitters. PACAP is useful for the study of central ipRGC projections because, in the retina, it is found exclusively within melanopsin cells. Little is known about the central projections of ipRGCs in diurnal species. Here, we first characterized these cells in the retina of the diurnal Nile grass rat using immunohistochemistry (IHC). The same basic subtypes of melanopsin cells that have been described in other mammals were present, but nearly 25% of them were displaced, primarily in its superior region. PACAP was present in 87.7% of all melanopsin cells, while 97.4% of PACAP cells contained melanopsin. We then investigated central projections of ipRGCs by examining the distribution of immunoreactive PACAP fibers in intact and enucleated animals. This revealed evidence that these cells project to the suprachiasmatic nucleus, lateral geniculate nucleus (LGN), pretectum, and superior colliculus. This distribution was confirmed with injections of cholera toxin subunit β coupled with Alexa Fluor 488 in one eye and Alexa Fluor 594 in the other, combined with IHC staining of PACAP. These studies also revealed that the ventral and dorsal LGN and the caudal olivary pretectal nucleus receive less innervation from ipRGCs than that reported in nocturnal rodents. Overall, these data suggest that although ipRGCs and their projections are very similar in diurnal and nocturnal rodents, they may not be identical.

Orexin Gene Therapy Restores the Timing and Maintenance of Wakefulness in Narcoleptic Mice

PubMed Central

Kantor, Sandor; Mochizuki, Takatoshi; Lops, Stefan N.; Ko, Brian; Clain, Elizabeth; Clark, Erika; Yamamoto, Mihoko; Scammell, Thomas E.

2013-01-01

Study Objectives: Narcolepsy is caused by selective loss of the orexin/hypocretin-producing neurons of the hypothalamus. For patients with narcolepsy, chronic sleepiness is often the most disabling symptom, but current therapies rarely normalize alertness and do not address the underlying orexin deficiency. We hypothesized that the sleepiness of narcolepsy would substantially improve if orexin signaling were restored in specific brain regions at appropriate times of day. Design: We used gene therapy to restore orexin signaling in a mouse model of narcolepsy. In these Atx mice, expression of a toxic protein (ataxin-3) selectively kills the orexin neurons. Interventions: To induce ectopic expression of the orexin neuropeptides, we microinjected an adeno-associated viral vector coding for prepro-orexin plus a red fluorescence protein (AAV-orexin) into the mediobasal hypothalamus of Atx and wild-type mice. Control mice received an AAV coding only for red fluorescence protein. Two weeks later, we recorded sleep/wake behavior, locomotor activity, and body temperature and examined the patterns of orexin expression. Measurements and Results: Atx mice rescued with AAV-orexin produced long bouts of wakefulness and had a normal diurnal pattern of arousal, with the longest bouts of wake and the highest amounts of locomotor activity in the first hours of the night. In addition, AAV-orexin improved the timing of rapid eye movement sleep and the consolidation of nonrapid eye movement sleep in Atx mice. Conclusions: These substantial improvements in sleepiness and other symptoms of narcolepsy demonstrate the effectiveness of orexin gene therapy in a mouse model of narcolepsy. Additional work is needed to optimize this approach, but in time, AAV-orexin could become a useful therapeutic option for patients with narcolepsy. Citation: Kantor S; Mochizuki T; Lops SN; Ko B; Clain E; Clark E; Yamamoto M; Scammell TE. Orexin gene therapy restores the timing and maintenance of wakefulness in narcoleptic mice. SLEEP 2013;36(8):1129–1138. PMID:23904672

Taking the pulse of snowmelt: in situ sensors reveal seasonal, event and diurnal patterns of nitrate and dissolved organic matter variability in an upland forest stream

Treesearch

Brian A. Pellerin; John Franco Saraceno; James B. Shanley; Stephen D. Sebestyen; George R. Aiken; Wilfred M. Wollheim; Brian A. Bergamaschi

2012-01-01

Highly resolved time series data are useful to accurately identify the timing, rate, and magnitude of solute transport in streams during hydrologically dynamic periods such as snowmelt. We used in situ optical sensors for nitrate (NO3-) and chromophoric dissolved organic matter fluorescence (FDOM) to measure surface water...

Diurnal variation in probability of death following self-poisoning in Sri Lanka—evidence for chronotoxicity in humans

PubMed Central

Metcalfe, Chris; Gunnell, David; Mohamed, Fahim; Eddleston, Michael

2012-01-01

Background The absorption, distribution, metabolism and elimination of medicines are partly controlled by transporters and enzymes with diurnal variation in expression. Dose timing may be important for maximizing therapeutic and minimizing adverse effects. However, outcome data for such an effect in humans are sparse, and chronotherapeutics is consequently less practised. We examined a large prospective Sri Lankan cohort of patients with acute poisoning to seek evidence of diurnal variation in the probability of survival. Methods In all, 14 840 patients admitted to hospital after yellow oleander (Cascabela thevetia) seed or pesticide [organophosphorus (OP), carbamate, paraquat, glyphosate] self-poisoning were investigated for variation in survival according to time of ingestion. Results We found strong evidence that the outcome of oleander poisoning was associated with time of ingestion (P < 0.001). There was weaker evidence for OP insecticides (P = 0.041) and no evidence of diurnal variation in the outcome for carbamate, glyphosate and paraquat pesticides. Compared with ingestion in the late morning, and with confounding by age, sex, time of and delay to hospital presentation and year of admission controlled, case fatality of oleander poisoning was over 50% lower following evening ingestion (risk ratio = 0.40, 95% confidence interval 0.26–0.62). Variation in dose across the day was not responsible. Conclusions We have shown for the first time that timing of poison ingestion affects survival in humans. This evidence for chronotoxicity suggests chronotherapeutics should be given greater attention in drug development and clinical practice. PMID:23179303

Testosterone levels change with subsistence hunting effort in !Kung San men.

PubMed

Worthman, C M; Konner, M J

1987-01-01

Although little is known empirically of the physiology of human hunting, arguments for innate biological bases of gender-dimorphic behaviors such as aggression frequently point to the role of hunting in human evolution. Study of !Kung San hunter-gatherer men demonstrated that the diurnal pattern in serum testosterone was altered during a six-day hunt, compared to pre- and post-hunt levels, due mainly to elevation of evening values. Hunting success did not correlate with any testosterone measures. The pattern of changes observed is most consistent with the known concomitants of moderate prolonged exercise.

Diurnal changes of photosynthetic quantum yield in the intertidal macroalga Sargassum thunbergii under simulated tidal emersion conditions

NASA Astrophysics Data System (ADS)

Yu, Yong Qiang; Zhang, Quan Sheng; Tang, Yong Zheng; Li, Xue Meng; Liu, Hong Liang; Li, Li Xia

2013-07-01

In this study, a three-way factorial experimental design was used to investigate the diurnal changes of photosynthetic activity of the intertidal macroalga Sargassum thunbergii in response to temperature, tidal pattern and desiccation during a simulated diurnal light cycle. The maximum (Fv/Fm) and effective (ΦPSII) quantum yields of photosystem II (PSII) were estimated by chlorophyll fluorescence using a pulse amplitude modulated fluorometer. Results showed that this species exhibited sun-adapted characteristics, as evidenced by the daily variation of Fv/Fm and ΦPSII. Both yield values decreased with increasing irradiance towards noon and recovered rapidly in the afternoon suggesting a dynamic photoinhibition. The photosynthetic quantum yield of S. thunbergii thalli varied significantly with temperature, tidal pattern and desiccation. Thalli were more susceptible to light-induced damage at high temperature of 25 °C and showed complete recovery of photosynthetic activity only when exposed to 8 °C. In contrast with the mid-morning low tide period, although there was an initial increase in photosynthetic yield during emersion, thalli showed a greater degree of decline at the end of emersion and remained less able to recover when low tide occurred at mid-afternoon. Short-term air exposure of 2 h did not significantly influence the photosynthesis. However, when exposed to moderate conditions (4 h desiccation at 15 °C or 6 h desiccation at 8 °C), a significant inhibition of photosynthesis was followed by partial or complete recovery upon re-immersion in late afternoon. Only extreme conditions (4 h desiccation at 25 °C or 6 h desiccation at 15 °C or 25 °C) resulted in the complete inhibition, with little indication of recovery until the following morning, implying the occurrence of chronic PSII damage. Based on the magnitude of effect, desiccation was the predominant negative factor affecting the photosynthesis under the simulated daytime irradiance period. These results may explain the distribution pattern of this species in natural habitats, where it is generally restricted to tide pools in the intertidal zone of wave-swept rocky shores which could provide shelter from desiccation stress during low tide.

Invasion of Ancestral Mammals into Dim-light Environments Inferred from Adaptive Evolution of the Phototransduction Genes

PubMed Central

Wu, Yonghua; Wang, Haifeng; Hadly, Elizabeth A.

2017-01-01

Nocturnality is a key evolutionary innovation of mammals that enables mammals to occupy relatively empty nocturnal niches. Invasion of ancestral mammals into nocturnality has long been inferred from the phylogenetic relationships of crown Mammalia, which is primarily nocturnal, and crown Reptilia, which is primarily diurnal, although molecular evidence for this is lacking. Here we used phylogenetic analyses of the vision genes involved in the phototransduction pathway to predict the diel activity patterns of ancestral mammals and reptiles. Our results demonstrated that the common ancestor of the extant Mammalia was dominated by positive selection for dim-light vision, supporting the predominate nocturnality of the ancestral mammals. Further analyses showed that the nocturnality of the ancestral mammals was probably derived from the predominate diurnality of the ancestral amniotes, which featured strong positive selection for bright-light vision. Like the ancestral amniotes, the common ancestor of the extant reptiles and various taxa in Squamata, one of the main competitors of the temporal niches of the ancestral mammals, were found to be predominate diurnality as well. Despite this relatively apparent temporal niche partitioning between ancestral mammals and the relevant reptiles, our results suggested partial overlap of their temporal niches during crepuscular periods. PMID:28425474

Remote detection of water stress in orchard canopies using MODIS/ASTER airborne simulator (MASTER) data

NASA Astrophysics Data System (ADS)

Cheng, Tao; Riaño, David; Koltunov, Alexander; Whiting, Michael L.; Ustin, Susan L.

2011-09-01

Vegetation canopy water content (CWC) is an important parameter for monitoring natural and agricultural ecosystems. Previous studies focused on the observation of annual or monthly variations in CWC but lacked temporal details to study vegetation physiological activities within a diurnal cycle. This study provides an evaluation of detecting vegetation diurnal water stress using airborne data acquired with the MASTER instrument. Concurrent with the morning and afternoon acquisitions of MASTER data, an extensive field campaign was conducted over almond and pistachio orchards in southern San Joaquin Valley of California to collect CWC measurements. Statistical analysis of the field measurements indicated a significant decrease of CWC from morning to afternoon. Field measured CWC was linearly correlated to the normalized difference infrared index (NDII) calculated with atmospherically corrected MASTER reflectance data using either FLAASH or empirical line (EL). Our regression analysis demonstrated that both atmospheric corrections led to a root mean square error (RMSE) of approximately 0.035 kg/m2 for the estimation of CWC (R2=0.42 for FLAASH images and R2=0.45 for EL images). Remote detection of the subtle decline in CWC awaits an improved prediction of CWC. Diurnal CWC maps revealed the spatial patterns of vegetation water status in response to variations in irrigation treatment.

Social strain and cortisol regulation in midlife in the US.

PubMed

Friedman, Esther M; Karlamangla, Arun S; Almeida, David M; Seeman, Teresa E

2012-02-01

Chronic stress has been implicated in a variety of adverse health outcomes, from compromised immunity to cardiovascular disease to cognitive decline. The hypothalamic pituitary adrenal (HPA) axis has been postulated to play the primary biological role in translating chronic stress into ill health. Stressful stimuli activate the HPA-axis and cause an increase in circulating levels of cortisol. Frequent and long-lasting activation of the HPA-axis, as occurs in recurrently stressful environments, can in the long run compromise HPA-axis functioning and ultimately affect health. Negative social interactions with family and friends may be a significant source of stress in daily life, constituting the type of recurrently stressful environment that could lead to compromised HPA functioning and altered diurnal cortisol rhythms. We use data from two waves (1995 and 2004-2005) of the Midlife in the U.S. (MIDUS) study and from the National Study of Daily Experiences (NSDE) and piecewise growth curve models to investigate relationships between histories of social strain and patterns of diurnal cortisol rhythms. We find that reported levels of social strain were significantly associated with their diurnal cortisol rhythm. These effects were more pronounced for individuals with a history of greater reported strain across a ten-year period. Copyright © 2011 Elsevier Ltd. All rights reserved.

Ionospheric irregularities and acoustic/gravity wave activity above low-latitude thunderstorms

DOE PAGES

Lay, Erin H.

2017-12-18

Ionospheric irregularities due to plasma bubbles, scintillation, and acoustic/gravity waves are studied in the low-latitude ionosphere in relation to thunderstorm activity. Ionospheric total electron content (TEC) measurements from the Low Latitude Ionospheric Sensor Network (LISN) and lightning measurements from the World-Wide Lightning Location Network (WWLLN) are compared during two summer months and two winter months in 2013. Large amplitude fluctuations in TEC are found to have a strongly-peaked diurnal pattern in the late evening and nighttime summer ionosphere. The maximum magnitude and coverage area of these fluctuations increases as thunderstorm area increases. Summertime mid-amplitude fluctuations do not exhibit the samemore » diurnal variation, but do increase in magnitude and coverage area as thunderstorm area increases. Wintertime ionospheric fluctuations do not appear to be related to thunderstorm activity. Lastly, these findings show that thunderstorms have an observable effect on magnitude and coverage area of ionospheric fluctuations.« less

Assessment of ozone variations and meteorological effects in an urban area in the Mediterranean Coast.

PubMed

Dueñas, C; Fernández, M C; Cañete, S; Carretero, J; Liger, E

2002-11-01

Ozone concentrations are valuable indicators of possible health and environmental impacts. However, they are also used to monitor changes and trends in the sources of both ozone and its precursors. For this purpose, the influence of meteorological variables is a confusing factor. This study presents an analysis of a year of ozone concentrations measured in a coastal Spanish city. Firstly, the aim of this study was to perceive the daily, monthly and seasonal variation patterns of ozone concentrations. Diurnal cycles are presented by season and the fit of the data to a normal distribution is tested. In order to assess ozone behaviour under temperate weather conditions, local meteorological variables (wind direction and speed, temperature, relative humidity, pressure and rainfall) were monitored together with ozone concentrations. The main relationships we could observe in these analyses were then used to obtain a regression equation linking diurnal ozone concentrations in summer with meteorological parameters.

Ionospheric irregularities and acoustic/gravity wave activity above low-latitude thunderstorms

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lay, Erin H.

Ionospheric irregularities due to plasma bubbles, scintillation, and acoustic/gravity waves are studied in the low-latitude ionosphere in relation to thunderstorm activity. Ionospheric total electron content (TEC) measurements from the Low Latitude Ionospheric Sensor Network (LISN) and lightning measurements from the World-Wide Lightning Location Network (WWLLN) are compared during two summer months and two winter months in 2013. Large amplitude fluctuations in TEC are found to have a strongly-peaked diurnal pattern in the late evening and nighttime summer ionosphere. The maximum magnitude and coverage area of these fluctuations increases as thunderstorm area increases. Summertime mid-amplitude fluctuations do not exhibit the samemore » diurnal variation, but do increase in magnitude and coverage area as thunderstorm area increases. Wintertime ionospheric fluctuations do not appear to be related to thunderstorm activity. Lastly, these findings show that thunderstorms have an observable effect on magnitude and coverage area of ionospheric fluctuations.« less

Psychosocial job strain and sleep quality interaction leading to insufficient recovery.

PubMed

Rydstedt, Leif W; Devereux, Jason J

2013-11-05

The purpose of the study was to assess the impact of job strain and sleep quality on the diurnal pattern of cortisol reactivity, measured by awakening and evening (10 PM) saliva cortisol. The sample consisted of 76 British white-collar workers (24 women, 52 men; mean age 45.8 years). Sleep quality and job strain were assessed in a survey distributed just before the cortisol sampling. Both input variables were dichotomized about the median and factorial ANOVA was used for the statistical analysis. Low sleep quality was significantly associated with lower morning cortisol secretion. While job strain had no main effects on the cortisol reactivity there was a significant interaction effect between the input variables on morning cortisol secretion. These findings tentatively support the hypothesis that lack of sleep for workers with high job strain may result in a flattened diurnal cortisol reactivity.

Diurnal patterns of wheat spectral reflectances and their importance in the assessment of canopy parameters from remotely sensed observations. [Phoenix, Arizona

NASA Technical Reports Server (NTRS)

Pinter, P. J.; Jackson, R. D.; Idso, S. B.; Reginato, R. J. (Principal Investigator)

1982-01-01

Spectral reflectances of Produra wheat were measured at 13 different times of the day at Phoenix, Arizona, during April 1979 using a nadir-oriented hand-held 4-band radiometer which had bandpass characteristics similar to those on LANDSAT satellites. Different Sun altitude and azimuth angles caused significant diurnal changes in radiant return in both visible and near-IR regions of the spectrum and in several vegetation indices derived from them. The magnitude of these changes were related to different canopy architecture, percent cover and green leaf area conditions. Spectral measurements taken at each time period were well correlated with green leaf area index but the nature of the relationship changed significantly with time of day. Thus, a significant bias in the estimation of the green leaf area index from remotely sensed spectral data could occur if sun angles are not properly accounted for.

Psychosocial Job Strain and Sleep Quality Interaction Leading to Insufficient Recovery

PubMed Central

Rydstedt, Leif W.; Devereux, Jason J.

2013-01-01

The purpose of the study was to assess the impact of job strain and sleep quality on the diurnal pattern of cortisol reactivity, measured by awakening and evening (10 PM) saliva cortisol. The sample consisted of 76 British white-collar workers (24 women, 52 men; mean age 45.8 years). Sleep quality and job strain were assessed in a survey distributed just before the cortisol sampling. Both input variables were dichotomized about the median and factorial ANOVA was used for the statistical analysis. Low sleep quality was significantly associated with lower morning cortisol secretion. While job strain had no main effects on the cortisol reactivity there was a significant interaction effect between the input variables on morning cortisol secretion. These findings tentatively support the hypothesis that lack of sleep for workers with high job strain may result in a flattened diurnal cortisol reactivity. PMID:24196305

Ionospheric Irregularities and Acoustic/Gravity Wave Activity Above Low-Latitude Thunderstorms

NASA Astrophysics Data System (ADS)

Lay, Erin H.

2018-01-01

Ionospheric irregularities due to plasma bubbles, scintillation, and acoustic/gravity waves are studied in the low-latitude ionosphere in relation to thunderstorm activity. Ionospheric total electron content (TEC) measurements from the Low Latitude Ionospheric Sensor Network and lightning measurements from the World-Wide Lightning Location Network are compared during two summer months and two winter months in 2013. Large amplitude fluctuations in TEC are found to have a strongly peaked diurnal pattern in the late evening and nighttime summer ionosphere. The maximum magnitude and coverage area of these fluctuations increases as thunderstorm area increases. Summertime midamplitude fluctuations do not exhibit the same diurnal variation but do increase in magnitude and coverage area as thunderstorm area increases. Wintertime ionospheric fluctuations do not appear to be related to thunderstorm activity. These findings show that thunderstorms have an observable effect on magnitude and coverage area of ionospheric fluctuations.

Somatostatin Is Essential for the Sexual Dimorphism of GH Secretion, Corticosteroid-Binding Globulin Production, and Corticosterone Levels in Mice

PubMed Central

Adams, Jessica M.; Otero-Corchon, Veronica; Hammond, Geoffrey L.; Veldhuis, Johannes D.; Qi, Nathan

2015-01-01

Distinct male and female patterns of pituitary GH secretion produce sexually differentiated hepatic gene expression profiles, thereby influencing steroid and xenobiotic metabolism. We used a fully automated system to obtain serial nocturnal blood samples every 15 minutes from cannulated wild-type (WT) and somatostatin knockout (Sst-KO) mice to determine the role of SST, the principal inhibitor of GH release, in the generation of sexually dimorphic GH pulsatility. WT males had lower mean and median GH values, less random GH secretory bursts, and longer trough periods between GH pulses than WT females. Each of these parameters was feminized in male Sst-KO mice, whereas female Sst-KO mice had higher GH levels than all other groups, but GH pulsatility was unaffected. We next performed hepatic mRNA profiling with high-density microarrays. Male Sst-KO mice exhibited a globally feminized pattern of GH-dependent mRNA levels, but female Sst-KO mice were largely unaffected. Among the differentially expressed female-predominant genes was Serpina6, which encodes corticosteroid-binding globulin (CBG). Increased CBG was associated with elevated diurnal peak plasma corticosterone in unstressed WT females and both sexes of Sst-KO mice compared with WT males. Sst-KO mice also had exaggerated ACTH and corticosterone responses to acute restraint stress. However, consistent with their lack of phenotypic signs of excess glucocorticoids, cerebrospinal fluid concentrations of free corticosterone in Sst-KO mice were not elevated. In summary, SST is necessary for the prolonged interpulse troughs that define masculinized pituitary GH secretion. SST also contributes to sexual dimorphism of the hypothalamic-pituitary-adrenal axis via GH-dependent regulation of hepatic CBG production. PMID:25551181

The effect of lateral decubitus position on nocturnal intraocular pressure over a habitual 24-hour period in healthy adults.

PubMed

Hao, Jie; Zhen, Yi; Wang, Hao; Yang, Diya; Wang, Ningli

2014-01-01

To investigate the effect of lateral decubitus position (LDP) on nocturnal intraocular pressure (IOP) and the effect of LDP on 24-hour habitual IOP pattern in healthy subjects. Intraocular pressure was measured every 2-hours using an Accupen Applanation Tonometer (Accutome, USA). During the diurnal period (7:30 am, 9:30 am, 11:30 am, 1:30 pm, 3:30 pm, 5:30 pm, 7:30 pm, and 9:30 pm), IOP was measured in the sitting position under bright light (500-1000 lux) after the subjects had been seated for 5 min. The nocturnal IOP was measured in the supine position, right LDP, and left LDP, with randomized sequences, under dim light (<10 lux) at 11:30 pm, 1:30 am, 3:30 am, and 5:30 am. The subjects were awakened and maintained each position for 5 min before the measurement. The 24-hour habitual IOP patterns were obtained according to the nocturnal position (supine, right LDP and left LDP) for either eye. P<0.05 was considered to be significant. Nineteen healthy subjects were included with a mean age of 51.3±5.8 years. During the nocturnal period, a significant IOP difference was found between the dependent eye (the eye on the lower side) of LDP and the supine position, but not for all the nocturnal time points. Over a 24-hour period, the effect of LDP on habitual IOP pattern was not statistically significant, although the mean nocturnal IOP and the diurnal-nocturnal IOP change for the right and the left eye in the LDP pattern was slightly higher than that in the sitting-supine pattern. Significant nocturnal IOP differences existed between the dependent eye and the supine, but did not occur consistently for all time points. Over a 24-hour period, the effect of LDP on habitual IOP pattern was not statistically significant in healthy subjects.

Impact of diurnal temperature variation on grape berry development, proanthocyanidin accumulation, and the expression of flavonoid pathway genes

USDA-ARS?s Scientific Manuscript database

Little is known about the impact of temperature on proanthocyanidin (PA) accumulation in grape skins, despite its significance in berry composition and wine quality. Field grown grapes (cv. Merlot) were cooled during the day or heated at night by +/- 8 °C, from fruit set to véraison in three seasons...

Perturbed rhythmic activation of signaling pathways in mice deficient for Sterol Carrier Protein 2-dependent diurnal lipid transport and metabolism

PubMed Central

Jouffe, Céline; Gobet, Cédric; Martin, Eva; Métairon, Sylviane; Morin-Rivron, Delphine; Masoodi, Mojgan; Gachon, Frédéric

2016-01-01

Through evolution, most of the living species have acquired a time keeping system to anticipate daily changes caused by the rotation of the Earth. In all of the systems this pacemaker is based on a molecular transcriptional/translational negative feedback loop able to generate rhythmic gene expression with a period close to 24 hours. Recent evidences suggest that post-transcriptional regulations activated mostly by systemic cues play a fundamental role in the process, fine tuning the time keeping system and linking it to animal physiology. Among these signals, we consider the role of lipid transport and metabolism regulated by SCP2. Mice harboring a deletion of the Scp2 locus present a modulated diurnal accumulation of lipids in the liver and a perturbed activation of several signaling pathways including PPARα, SREBP, LRH-1, TORC1 and its upstream regulators. This defect in signaling pathways activation feedbacks upon the clock by lengthening the circadian period of animals through post-translational regulation of core clock regulators, showing that rhythmic lipid transport is a major player in the establishment of rhythmic mRNA and protein expression landscape. PMID:27097688

Perturbed rhythmic activation of signaling pathways in mice deficient for Sterol Carrier Protein 2-dependent diurnal lipid transport and metabolism.

PubMed

Jouffe, Céline; Gobet, Cédric; Martin, Eva; Métairon, Sylviane; Morin-Rivron, Delphine; Masoodi, Mojgan; Gachon, Frédéric

2016-04-21

Through evolution, most of the living species have acquired a time keeping system to anticipate daily changes caused by the rotation of the Earth. In all of the systems this pacemaker is based on a molecular transcriptional/translational negative feedback loop able to generate rhythmic gene expression with a period close to 24 hours. Recent evidences suggest that post-transcriptional regulations activated mostly by systemic cues play a fundamental role in the process, fine tuning the time keeping system and linking it to animal physiology. Among these signals, we consider the role of lipid transport and metabolism regulated by SCP2. Mice harboring a deletion of the Scp2 locus present a modulated diurnal accumulation of lipids in the liver and a perturbed activation of several signaling pathways including PPARα, SREBP, LRH-1, TORC1 and its upstream regulators. This defect in signaling pathways activation feedbacks upon the clock by lengthening the circadian period of animals through post-translational regulation of core clock regulators, showing that rhythmic lipid transport is a major player in the establishment of rhythmic mRNA and protein expression landscape.

Race and diurnal blood pressure patterns. A review and meta-analysis.

PubMed

Profant, J; Dimsdale, J E

1999-05-01

Investigators have reported variable findings regarding the role of race in diurnal blood pressure patterns. We performed a review and meta-analysis of this literature to identify the overall effect of race on circadian blood pressure patterns. Eighteen studies involving 2852 participants were reviewed. Meta-analyses were conducted using effect sizes calculated from the data provided directly in the study reports. Separate meta-analyses were conducted on effect sizes for differences between blacks and whites in daytime and nighttime systolic and diastolic blood pressure and nocturnal dip in systolic and diastolic blood pressure. To evaluate discrepancies in findings from studies involving American versus non-American blacks, overall meta-analyses as well as within-subset meta-analyses of black/white differences were conducted for comparisons involving American and non-American blacks. Results of overall meta-analyses indicate that blacks experience higher levels of systolic and diastolic blood pressure, both at night and during the day. These differences were significantly greater at night than during the day (P<0.05). Results of within-subset analyses involving American blacks mirrored those for all black/white comparisons, except that the effect of race on nocturnal dip, ie, that American blacks experienced less of a dip in both systolic and diastolic blood pressure at night, was significant (P<0.05). In contrast, the effect of race on nocturnal dip was not significant for comparisons involving non-American blacks. These results suggest a consistent difference in the chronobiology of blood pressure, particularly in American blacks.

Diurnal patterns of methane flux from a seasonal wetland: mechanisms and methodology

USGS Publications Warehouse

Bansal, Sheel; Tangen, Brian; Finocchiaro, Raymond

2018-01-01

Methane emissions from wetlands are temporally dynamic. Few chamber-based studies have explored diurnal variation in methane flux with high temporal replication. Using an automated sampling system, we measured methane flux every 2.5 to 4 h for 205 diel cycles during three growing seasons (2013–2015) from a seasonal wetland in the Prairie Pothole Region of North America. During ponded conditions, fluxes were generally positive (i.e., methanogenesis dominant, 10.1 ± 0.8 mg m−2 h−1), had extreme range of variation (from −1 to 70 mg m−2 h−1), and were highest during late day. In contrast, during dry conditions fluxes were very low and primarily negative (i.e., oxidation dominant, −0.05 ± 0.002 mg m−2 h−1), with the highest (least negative) fluxes occurring at pre-dawn. During semi-saturated conditions, methane fluxes also were very low, oscillated between positive and negative values (i.e., balanced between methanogenesis and methane oxidation), and exhibited no diel pattern. Methane flux was positively correlated with air temperature during ponded conditions (r = 0.57) and negatively during dry conditions (r = −0.42). Multiple regression analyses showed that temperature, light and water-filled pore space explained 72% of variation in methane flux. Methane fluxes are highly temporally dynamic and follow contrasting diel patterns that are dependent on dominant microbial processes influenced by saturation state.

Diurnal Salivary Cortisol Patterns Prior to Pregnancy Predict Infant Birth Weight

PubMed Central

Guardino, Christine M.; Schetter, Christine Dunkel; Saxbe, Darby E.; Adam, Emma K.; Ramey, Sharon Landesman; Shalowitz, Madeleine U.

2016-01-01

Objective Elevated maternal psychosocial stress during pregnancy and accompanying changes in stress hormones may contribute to risk of adverse birth outcomes such as low birth weight and preterm birth. Relatedly, research on fetal programming demonstrates intriguing associations between maternal stress processes during pregnancy and outcomes in offspring that extend into adulthood. The purpose of this study was to test whether HPA patterns in mothers during the period between two pregnancies (i.e., the interpregnancy interval) and the subsequent pregnancy predict infant birth weight, a key birth outcome. Methods This study sampled salivary cortisol both before and during pregnancy in a diverse community sample of 142 women in the Community Child Health Network (CCHN) study. Results Using multilevel modeling, we found that flatter diurnal cortisol slopes in mothers during the interval between one birth and a subsequent pregnancy predicted lower infant birth weight of the subsequent child. This interpregnancy cortisol pattern in mothers also correlated with significantly shorter inter-pregnancy intervals, such that women with flatter cortisol slopes had more closely spaced pregnancies. After adding demographic covariates of household income, cohabitation with partner, and race to the model, these results were unchanged. For participants who provided both interpregnancy and pregnancy cortisol data (n = 73), we found that interpregnancy cortisol slopes predicted infant birth weight independent of pregnancy cortisol slopes. Conclusions These novel findings on interpregnancy HPA axis function and subsequent pregnancy outcomes strongly support lifespan health approaches and underscore the importance of maternal stress physiology between pregnancies. PMID:26844584

Measurement of tidal and residual currents in the Strait of Hormuz

NASA Astrophysics Data System (ADS)

Azizpour, Jafar; Siadatmousavi, Seyed Mostafa; Chegini, Vahid

2016-09-01

Quantifying the current in the Strait of Hormuz (SH) is vital for understanding the circulation in the Persian Gulf. To measure the current in the strait, four subsurface moorings were deployed at four different stations close to SH from early November 2012 to the end of January 2013. Tidal current were dominant in the SH. The tides in the SH were complex partially standing waves and the dominant pattern varied from being primarily semi-diurnal to diurnal. The phase difference between tidal constituents of current and sea level elevation time series was used as an index to show the partially progressive wave pattern inside the study area. At mooring positions 3 and 4, located to the left of SH, the phase differences were close to 160° and 100°, respectively. It indicates partially progressive waves in opposite direction at these stations. K1 and M2 were the two main constituents at all stations inside the study area. At surface, the magnitude of semi-major axis of ellipses for M2 constituent was larger than corresponding value for K1 whereas at the bottom layer, the opposite pattern was observed. The M2 rotary coefficients at mooring 1 illustrated that current vector at the bottom layer rotated in opposite direction compared to current vectors at the middle and surface layers. The rotation was counterclockwise in the bottom layer, while it was clockwise in the surface and middle layers.

Diurnal pH variations of a Glacial Stream: a starting point for Inquiry-driven student and teacher Investigations of a Glacial Ecosystem

NASA Astrophysics Data System (ADS)

O'Brien, W. P.; Galbraith, J.; Fatland, D. R.; Heavner, M.

2009-12-01

Contemporary geoscience research often operates in a mode that generates huge repositories of data available on the internet to the scientific community and the general public. The SEAMONSTER (SM) online data browser of both archival and real-time data is an example of such a dynamic online ecosystem resource associated with the Juneau Icefield. Although newly developed database navigation tools and geobrowsers make it easy for non-experts to access data of interest, it nonetheless can be daunting to K-16 educators to fashion lesson plans that make effective use of these rich resources. In the following scenario, a student and associated teacher, operating outside the traditional didactic lecture/demo mode, explore and try to make sense of a tiny portion of SM data in a spirit of inquiry guided by curiosity, looking for features that catch their attention as they skim through interactive time-series graphs (96 samples/day) of data from Lemon Creek (which drains Lemon Glacier) for stream hydrological variables (temperature, pH, conductivity, dissolved oxygen, turbidity, discharge) and associated meteorological variables (precipitation, humidity, temperature). Amidst all the complex fluctuations that follow no immediately apparent pattern, one regular and continuous feature does stand out: a seemingly sinusoidal diurnal variation in pH of about 0.1 that peaks daily at noon. This high-frequency signal is superimposed on a slower signal characterized by multiple-day trends and larger fluctuations in pH. The resulting composite signal with its easily identifiable patterns is an ideal candidate for investigating Fourier signal decomposition. They hypothesize that photosynthesis could be a contributing factor to the diurnal signal and then design and run an experiment modeling bioactive streamwater with a blended chloroplast-rich slurry of fresh spinach leaves (spinach soup). They put a recording pH meter in the spinach soup and expose it to high and low levels of light; the experiment (based in part on my own actual videotaped spinach-soup study) returns a positive correlation between elevated pH and increased photosynthetic activity in the soup, thereby providing a plausible explanation for micro-scale daily fluctuations in stream pH. They then re-examine the local hydrological and meteorological data, looking for patterns and correlations that might enable them to infer the sources (glacial or watershed) and types of photosynthetic producers/consumers living in Lemon Creek. These results could then be compared with diurnal pH variations also found in a nearby non-glacial stream, Montana Creek. Thus the steady pH heartbeat of a stream in the dynamic ecosystem surrounding a partially-glaciated watershed threads together a diverse set of inquiry-and-data-driven ecological investigations integrating topics from chemistry, biology, physics and informatics.

Oceanic Tidal Mixing As a Contributor to Milankovitch-scale Climate Change

NASA Technical Reports Server (NTRS)

Munk, Walter; Bills, Bruce

2004-01-01

We propose that changes in the magnitude of oceanic tidal mixing on long time scales is an important, but previously unrecognized, contributor to global climate change. it is well known that Earth's orbital and rotational state changes significantly on 10(exp 4)-10(exp 5) year time scales, and that this influences the spatial and temporal pattern of incident radiation. It is widely supposed that climatic variations on these same time scales are, in large part, a response of the ocean-atmosphere-cryosphere system to this radiative forcing. Our proposal is that variations in the luni-solar tidal potential, induced by these same orbital and rotational variations, influences oceanic mixing and thus modulates meridional heat transport, by amounts which are competitive with the radiative forcing. There are some obvious differences between tidal potential and insolation. First is that the Sun and Moon both contribute to tides, whereas the radiation is entirely of solar origin. Second is that the Earth is transparent to gravity but opaque to radiation. Clipping associated with this opacity makes the radiation pattern temporal spectrum rather more complex than the tidal spectrum. A third point is that solar radiation directly delivers energy to Earth's surface whereas tidal mixing will only expedite lateral transport of heat in association with oceanic thermohaline circulation. The diurnal average insolation pattern is best parameterized via a Fourier series in time of year and Legendre polynomials in sine of latitude. Our present focus will be on the annual average terms. The Legendre degree n=0 term describes the global average insolation, and is nearly constant. The degree n=l term describes differences between northern and southern hemispheres, and the annual mean is zero. The degree n=2 term is the main contributor to the equator to pole variations, and varies with obliquity and orbital eccentricity, with the obliquity variation dominating. The lowest order decomposition of the tidal potential recognizes 3 constituents: semi-diurnal, diurnal, and long period, with solar and lunar contributions to each. Our present focus will be on long term variations in the mean square amplitude of the semi-diurnal constituent, with averaging over all the short period variations. For the solar tide that includes the day and year. For the lunar tide it includes the day, month, year, and the apsidal (8.85 year) and nodal (18.6 year) periods. We present calculations of the variations in radiative and tidal forcing for the past 3 million years. The two signals are quite similar. Both vary by approximately 1% of their respective mean values, are dominated by obliquity variations, and exhibit only secondary influence from orbital eccentricity.

Oceanic Tidal Mixing as a Contributor to Milankovitch-scale Climate Change

NASA Astrophysics Data System (ADS)

Munk, W.; Bills, B. G.

2004-12-01

We propose that changes in the magnitude of oceanic tidal mixing on long time scales is an important, but previously unrecognized, contributor to global climate change. It is well known that Earth's orbital and rotational state changes significantly on 104-105 year time scales, and that this influences the spatial and temporal pattern of incident radiation. It is widely supposed that climatic variations on these same time scales are, in large part, a response of the ocean-atmosphere-cryosphere system to this radiative forcing. Our proposal is that variations in the luni-solar tidal potential, induced by these same orbital and rotational variations, influences oceanic mixing and thus modulates meridional heat transport, by amounts which are competitive with the radiative forcing. There are some obvious differences between tidal potential and insolation. First is that the Sun and Moon both contribute to tides, whereas the radiation is entirely of solar origin. Second is that the Earth is transparent to gravity but opaque to radiation. Clipping associated with this opacity makes the radiation pattern temporal spectrum rather more complex than the tidal spectrum. A third point is that solar radiation directly delivers energy to Earth's surface whereas tidal mixing will only expedite lateral transport of heat in association with oceanic thermo-haline circulation. The diurnal average insolation pattern is best parameterized via a Fourier series in time of year and Legendre polynomials in sine of latitude. Our present focus will be on the annual average terms. The Legendre degree n=0 term describes the global average insolation, and is nearly constant. The degree n=1 term describes differences between northern and southern hemispheres, and the annual mean is zero. The degree n=2 term is the main contributor to the equator to pole variations, and varies with obliquity and orbital eccentricity, with the obliquity variation dominating. The lowest order decomposition of the tidal potential recognizes 3 constituents: semi-diurnal, diurnal, and long period, with solar and lunar contributions to each. Our present focus will be on long term variations in the mean square amplitude of the semi-diurnal constituent, with averaging over all the short period variations. For the solar tide that includes the day and year. For the lunar tide it includes the day, month, year, and the apsidal (8.85 year) and nodal (18.6 year) periods. We present calculations of the variations in radiative and tidal forcing for the past 3 million years. The two signals are quite similar. Both vary by ~1% of their respective mean values, are dominated by obliquity variations, and exhibit only secondary influence from orbital eccentricity.

Seasonal and Circadian Variation in Salivary Testosterone in Rural Bolivian Men

PubMed Central

Vitzthum, Virginia J.; Worthman, Carol M.; Beall, Cynthia M.; Thornburg, Jonathan; Vargas, Enrique; Villena, Mercedes; Soria, Rudy; Caceres, Esperanza; Spielvogel, Hilde

2013-01-01

Testosterone (T) plays a key role in the increase and maintenance of muscle mass and bone density in adult men. Life history theory predicts that environmental stress may prompt a reallocation of such investments to those functions critical to survival. We tested this hypothesis in two studies of rural Bolivian adult men by comparing free T levels and circadian rhythms during late winter, which is especially severe, to those in less arduous seasons. For each pair of salivary TAM/TPM samples (collected in a ~12-hour period), circadian rhythm was considered classic (CCLASSIC) if TAM>110%TPM, reverse (CREVERSE) if TPM>110%TAM, and flat (CFLAT) otherwise. We tested the hypotheses that mean TAM>mean TPM and that mean TLWTOTHER-PM (A: p=0.035, B: p=0.0005) and TOTHER-AM>TLW-AM (A: p=0.054, B: p=0.007); TPM did not vary seasonally, and T diurnality was not significant during late winter. T diurnality varied substantially between days within an individual, between individuals and between seasons, but neither T levels nor diurnality varied with age. These patterns may reflect the seasonally varying but unscheduled, life-long, strenuous physical labor that typifies many non-industrialized economies. These results also suggest that single morning samples may substantially underestimate peak circulating T for an individual and, most importantly, that exogenous signals may moderate diurnality and the trajectory of age-related change in the male gonadal axis. PMID:19367574

Dynamic characteristics of soil respiration in Yellow River Delta wetlands, China

NASA Astrophysics Data System (ADS)

Wang, Xiao; Luo, Xianxiang; Jia, Hongli; Zheng, Hao

2018-02-01

The stable soil carbon (C) pool in coastal wetlands, referred to as "blue C", which has been extensively damaged by climate change and soil degradation, is of importance to maintain global C cycle. Therefore, to investigate the dynamic characteristics of soil respiration rate and evaluate C budgets in coastal wetlands are urgently. In this study, the diurnal and seasonal variation of soil respiration rate in the reed wetland land (RL) and the bare wetland land (BL) was measured in situ with the dynamic gas-infrared CO2 method in four seasons, and the factors impacted on the dynamic characteristics of soil respiration were investigated. The results showed that the diurnal variation of soil respiration rate consistently presented a "U" curve pattern in April, July, and September, with the maximum values at 12:00 a.m. and the minimum values at 6:00 a.m. In the same season, the diurnal soil respiration rate in RL was significantly greater than those in BL (P < 0.05). In April, July, and September, the mean diurnal soil respiration rate was 0.14, 0.42, and 0.39 μmol m-2 s-1 in RL, 0.05, 0.22, 0.13, and 0.01 μmol m-2 s-1 in BL, respectively. Soil surface temperature was the primary factor that influenced soil respiration, which was confirmed by the exponential positive correlation between the soil respiration rate and soil surface temperature in BL and RL (P < 0.05). In addition, the high salinity of soils suppressed soil respiration, confirming by the significantly negative correlation between soil respiration rate and the content of soluble salt. These results will be useful for understanding the mechanisms underlying soil respiration and elevating C sequestration potential in the coastal wetlands.