Quaternary geology and geomorphology of the Dinosaur Provincial Park area and surrounding plains, Alberta, Canada: the identification of former glacial lobes, drainage diversions and meltwater flood tracks

NASA Astrophysics Data System (ADS)

Evans, David J. A.

2000-06-01

The Quaternary geology and geomorphology of the lower Red Deer River drainage basin, centred on the Dinosaur Provincial Park badlands, provides information on pre-Late Wisconsinan drainage patterns and the dynamics of former lobes of the Laurentide Ice Sheet in western Canada. Patterns of deglaciation, proglacial lake evolution and spillway incision are also reconstructed based upon the distribution of surface materials and glacial/glaciofluvial landforms. The Empress Group fluvial and glaciolacustrine sediments, which could be as young as 27 ka BP, infill the precursor Red Deer River and its tributaries and document the initial advance of glacier ice into southern Alberta. Glaciotectonic disturbance of older sediments and bedrock, the production of deformation tills and the construction of a megafluting complex and cupola hills record the advances of a glacier lobe centred over the study area. Stratified inter- and intra-till beds record pulses of subglacial meltwater between phases of subsole deformation. The thickening of tills towards the margin of the lobe represents a till wedge, an expected product of sediment advection by glaciers moving over deformable beds. The eastern margin of the glacier lobe is demarcated by the interlobate Suffield hummocky moraine belt which contains overprinted thrust ridges, which record diachronous oscillations of neighbouring lobes within the ice sheet. Proglacial and glaciofluvial sediments were deposited in the area in association with proglacial Lake Bassano/Patricia, which drained eastwards when the Suffield moraine was dissected by spillways. Changes in the size of glacial lake Bassano/Patricia are clearly documented by a sequence of spillway incisions which culminated in the erosion of scabland topography and the initiation of a new course for the Red Deer River, a 15 km southward diversion of the main channel. In distinct contrast to the documented incision histories of other small rivers in Alberta, One Tree Creek and Little Sandhill Creek did not start major incisions of the Quaternary sediments over buried valley positions until the late-Holocene when environmental conditions were characterized by higher precipitation.

3D Deformation and Evolution of Mediterranean Basins: Insights From Crustal and Mantle Anisotropy

NASA Astrophysics Data System (ADS)

Lebedev, S.; Endrun, B.; Meier, T. M.; Adam, J.; Tirel, C.

2010-12-01

The slow convergence of Africa and Eurasia has been accompanied by spectacular tectonic activity within the Mediterranean. The evolution and retreat of multiple subduction zones has brought about pervasive deformation of continental back-arc basins. Continental deformation in the Mediterranean is at rates among the highest globally, and with diverse patterns and boundary conditions. Better understanding of this deformation promises important new insights into the dynamics of continents, and numerous competing models have been put forward. The lack of consensus to date is in large part due to the paucity of observational constraints on the deformation and flow within the deep crust and lithospheric mantle. Observations of seismic anisotropy provide constraints on deformation at depth. Array analysis of surface waves, in particular, can resolve variations in anisotropic fabric both laterally and as a function of depth. Analyses of other data types, including SKS splitting and Pn anisotropy, cross-validate and complement surface-wave constraints on anisotropy. Recent seismic-anisotropy imaging in the North Tyrrhenian and the Aegean indicates widespread diffuse deformation within the lithosphere, some of it with previously unknown patterns. Anisotropy shows the layering of finite strain in the crust and mantle. It reveals complex, depth-dependent flow patterns within the extending lithosphere and underlying asthenosphere. In the northern Aegean, fast shear-wave propagation directions within the mantle lithosphere are N-S, parallel to the direction of current extension. This indicates that the brittle upper crust, undergoing both stretching and bookshelf-like faulting on NE-SW trending faults, is underlain by a viscous mantle lithosphere that is flowing straight in the direction of the N-S extension. In the south-central Aegean, deforming weakly at present, anisotropic fabric in the lower crust trends parallel to the direction of paleo-extension in the Miocene; this fabric is a record of pervasive crustal flow that accompanied the exhumation of metamorphic core complexes at that time. In the North Tyrrhenian, extension over the last 10 m.y. has also caused exhumation of metamorphic rocks, with stretching lineations recording an E-W extension direction. Anisotropic fabric in both the lower crust and mantle lithosphere match this direction, confirming that viscous flow within both layers has accommodated the extension. Previously observed SKS-wave splitting in the northern and central Aegean shows predominantly NE-SW fast-propagation directions and is likely to indicate current and recent flow in the asthenosphere due to the rapid retreat of the Hellenic subduction zone. In the North Tyrrhenian, anisotropy also changes at the lithosphere-asthenosphere boundary. Whereas the lithosphere preserves the E-W trending fabric that is a record of recent extension, the asthenosphere shows NW-SE trending fabric that indicates asthenospheric flow parallel to the Apennines and the trench, probably related to the complex configuration of the subducting slabs beneath the Alps and the Apennines.

Investigation of Optimal Digital Image Correlation Patterns for Deformation Measurement

NASA Technical Reports Server (NTRS)

Bomarito, G. F.; Ruggles, T. J.; Hochhalter, J. D.; Cannon, A. H.

2016-01-01

Digital image correlation (DIC) relies on the surface texture of a specimen to measure deformation. When the specimen itself has little or no texture, a pattern is applied to the surface which deforms with the specimen and acts as an artificial surface texture. Because the applied pattern has an effect on the accuracy of DIC, an ideal pattern is sought for which the error introduced into DIC measurements is minimal. In this work, a study is performed in which several DIC pattern quality metrics from the literature are correlated to DIC measurement error. The resulting correlations give insight on the optimality of DIC patterns in general. Optimizations are then performed to produce patterns which are well suited for DIC. These patterns are tested to show their relative benefits. Chief among these benefits are a reduction in error of approximately 30 with respect to a randomly generated pattern.

Oak mistletoe (Phoradendron villosum) is linked to microhabitat availability and avian diversity in Oregon white oak (Quercus garryana) woodlands

USGS Publications Warehouse

Pritchard, Kyle R.; Hagar, Joan; Shaw, David C.

2016-01-01

Mistletoes are parasitic or hemi-parasitic flowering plants that parasitize woody plants around the globe. Important food and cover resources provided by mistletoes have been related to strong patterns of positive association between wildlife diversity and mistletoe density. Mistletoes also create microhabitat features known to be important to wildlife by causing deformations in their host trees. However, links between availability of mistletoe-formed microhabitat and wildlife diversity has not been well studied. We investigated this relationship by quantifying microhabitat features and avian abundance and diversity related to infection by Oak Mistletoe (Phoradendron villosum) in Oregon White Oak (Quercus garryana). Q. garryana woodlands support several avian species of conservation concern, so an understanding of the influence of mistletoe on wildlife habitat is critical. Our results suggest that 1) structural heterogeneity within tree crowns; 2) avian species richness and abundance are positively associated with mistletoe load; and 3) P. villosum fruit, available is an important food for western bluebird (Sialia mexicana) and other wildlife in late autumn and early winter. If a goal of restoration is to maintain habitat for oak-associated bird species, managers should consider the retention of some oaks hosting mistletoe.

In situ experimental assessment of lake whitefish development following a freshwater oil spill.

PubMed

Debruyn, Adrian M H; Wernick, Barbara G; Stefura, Corey; McDonald, Blair G; Rudolph, Barri-Lynn; Patterson, Luanne; Chapman, Peter M

2007-10-15

Wabamun Lake (Alberta, Canada) has been subject to ongoing contamination with polycyclic aromatic hydrocarbons (PAHs) from multiple sources for decades and in August 2005 was exposed to ca. 149 500 L of bunker C oil following a train derailment. We compared the pattern, frequency, and severity of deformity in larvae of lake whitefish (Coregonus clupeaformis) incubated in situ in areas of Wabamun Lake exposed only to "background" PAH contamination and in areas additionally exposed to PAHs from the oil. All sites in the lake (including reference areas) showed incidences of deformity higher than are typically observed in laboratory studies. A small number of oil-exposed sites showed higher incidences of some teratogenic deformities and a tendency to exhibit deformities of higher severity than sites not exposed to oil. The frequency of moderate to severe deformities in 8 of 16 classes was correlated with PAH exposure. Nonmetric multivariate ordination of deformity data revealed a general pattern of increasing incidence and severity of several skeletal (lordosis, scoliosis) and craniofacial (ocular, jaw) deformities at sites with relatively high exposure to oil-derived PAHs. A simultaneous consideration of incidence, severity, and pattern of deformity enabled us to detect a consistent (overall approximately 5% above background) response to the oil despite high variability and high background deformity rates in this historically contaminated environment.

Coseismic and postseismic deformation associated with the 2016 Mw 7.8 Kaikoura earthquake, New Zealand: fault movement investigation and seismic hazard analysis

NASA Astrophysics Data System (ADS)

Jiang, Zhongshan; Huang, Dingfa; Yuan, Linguo; Hassan, Abubakr; Zhang, Lupeng; Yang, Zhongrong

2018-04-01

The 2016 moment magnitude (Mw) 7.8 Kaikoura earthquake demonstrated that multiple fault segments can undergo rupture during a single seismic event. Here, we employ Global Positioning System (GPS) observations and geodetic modeling methods to create detailed images of coseismic slip and postseismic afterslip associated with the Kaikoura earthquake. Our optimal geodetic coseismic model suggests that rupture not only occurred on shallow crustal faults but also to some extent at the Hikurangi subduction interface. The GPS-inverted moment release during the earthquake is equivalent to a Mw 7.9 event. The near-field postseismic deformation is mainly derived from right-lateral strike-slip motions on shallow crustal faults. The afterslip did not only significantly extend northeastward on the Needles fault but also appeared at the plate interface, slowly releasing energy over the past 6 months, equivalent to a Mw 7.3 earthquake. Coulomb stress changes induced by coseismic deformation exhibit complex patterns and diversity at different depths, undoubtedly reflecting multi-fault rupture complexity associated with the earthquake. The Coulomb stress can reach several MPa during coseismic deformation, which can explain the trigger mechanisms of afterslip in two high-slip regions and the majority of aftershocks. Based on the deformation characteristics of the Kaikoura earthquake, interseismic plate coverage, and historical earthquakes, we conclude that Wellington is under higher seismic threat after the earthquake and great attention should be paid to potential large earthquake disasters in the near future.[Figure not available: see fulltext.

Occurrence of oral deformities in larval anurans

USGS Publications Warehouse

Drake, D.L.; Altig, R.; Grace, J.B.; Walls, S.C.

2007-01-01

We quantified deformities in the marginal papillae, tooth rows, and jaw sheaths of tadpoles from 13 population samples representing three families and 11 sites in the southeastern United States. Oral deformities were observed in all samples and in 13.5-98% of the specimens per sample. Batrachochytrium dendrobatidis (chytrid) infections were detected in three samples. There was high variability among samples in the pattern and number of discovered deformities. Pairwise associations between oral structures containing deformities were nonrandom for several populations, especially those with B. dendrobatidis infections or high total numbers of deformities. Comparisons of deformities among samples using multivariate analyses revealed that tadpole samples grouped together by family. Analyses of ordination indicated that three variables, the number of deformities, the number of significant associations among deformity types within populations, and whether populations were infected with B. dendrobatidis, were significantly correlated with the pattern of deformities. Our data indicate that the incidence of oral deformities can be high in natural populations and that phylogeny and B. dendrobatidis infection exert a strong influence on the occurrence and type of oral deformities in tadpoles. ?? by the American Society of Ichthyologists and Herperologists.

Plains Tectonics on Venus

NASA Technical Reports Server (NTRS)

Banerdt, W. B.; McGill, G. E.; Zuber, M. T.

1996-01-01

Tectonic deformation in the plains of Venus is pervasive, with virtually every area of the planet showing evidence for faulting or fracturing. This deformation can be classified into three general categories, defined by the intensity and areal extent of the surface deformation: distributed deformation, concentrated deformation, and local fracture patterns.

Spatial carrier color digital speckle pattern interferometry for absolute three-dimensional deformation measurement

NASA Astrophysics Data System (ADS)

Gao, Xinya; Wang, Yonghong; Li, Junrui; Dan, Xizuo; Wu, Sijin; Yang, Lianxiang

2017-06-01

It is difficult to measure absolute three-dimensional deformation using traditional digital speckle pattern interferometry (DSPI) when the boundary condition of an object being tested is not exactly given. In practical applications, the boundary condition cannot always be specifically provided, limiting the use of DSPI in real-world applications. To tackle this problem, a DSPI system that is integrated by the spatial carrier method and a color camera has been established. Four phase maps are obtained simultaneously by spatial carrier color-digital speckle pattern interferometry using four speckle interferometers with different illumination directions. One out-of-plane and two in-plane absolute deformations can be acquired simultaneously without knowing the boundary conditions using the absolute deformation extraction algorithm based on four phase maps. Finally, the system is proved by experimental results through measurement of the deformation of a flat aluminum plate with a groove.

Numerical Modeling of Surface Deformation due to Magma Chamber Inflation/Deflation in a Heterogeneous Viscoelastic Half-space

NASA Astrophysics Data System (ADS)

Dichter, M.; Roy, M.

2015-12-01

Interpreting surface deformation patterns in terms of deeper processes in regions of active magmatism is challenging and inherently non-unique. This study focuses on interpreting the unusual sombrero-shaped pattern of surface deformation in the Altiplano Puna region of South America, which has previously been modeled as the effect of an upwelling diapir of material in the lower crust. Our goal is to investigate other possible interpretations of the surface deformation feature using a suite of viscoelastic models with varying material heterogeneity. We use the finite-element code PyLith to study surface deformation due to a buried time-varying (periodic) overpressure source, a magma body, at depth within a viscoelastic half-space. In our models, the magma-body is a penny-shaped crack, with a cylindrical region above the crack that is weak relative to the surrounding material. We initially consider a magma body within a homogeneous viscoelastic half-space to determine the effect of the free surface upon deformation above and beneath the source region. We observe a complex depth-dependent phase relationship between stress and strain for elements that fall between the ground surface and the roof of the magma body. Next, we consider a volume of weak material (faster relaxation time relative to background) that is distributed with varying geometry around the magma body. We investigate how surface deformation is governed by the spatial distribution of the weak material and its rheologic parameters. We are able to reproduce a "sombrero" pattern of surface velocities for a range of models with material heterogeneity. The wavelength of the sombrero pattern is primarily controlled by the extent of the heterogeneous region, modulated by flexural effects. Our results also suggest an "optimum overpressure forcing frequency" where the lifetime of the sombrero pattern (a transient phenomenon due to the periodic nature of the overpressure forcing) reaches a maximum. Through further research we hope to better understand how the parameter space of our forward model controls the distribution of surface deformation and eventually develop a better understanding of the observed pattern of surface deformation in the Altiplano Puna.

Thalamus surface shape deformity in obsessive-compulsive disorder and schizophrenia.

PubMed

Kang, Do-Hyung; Kim, Sun Hyung; Kim, Chi-Won; Choi, Jung-Seok; Jang, Joon Hwan; Jung, Myung Hun; Lee, Jong-Min; Kim, Sun I; Kwon, Jun Soo

2008-04-16

The authors performed a three-dimensional shape deformation analysis to clarify the various patterns of specific thalamic nuclei abnormality using three age-matched and sex-matched groups of 22 patients with obsessive-compulsive disorder (OCD), 22 patients with schizophrenia and 22 control participants. Compared with the healthy volunteers, the anterior, lateral outward surface deformities of the thalamus were significant in OCD patients, whereas the posterior, medial outward deformities of the thalamus were prominent in schizophrenia patients. In terms of thalamic asymmetry, both OCD and schizophrenia patients exhibited the loss of a leftward pattern of asymmetry on the posterior, medial surface of the thalamus. Different patterns of shape abnormality of specific thalamic nuclei may be related to the different phenomenology of OCD and schizophrenia.

Spatial Patterns of Carbonate Biomineralization in Biofilms

PubMed Central

Li, Xiaobao; Chopp, David L.; Russin, William A.; Brannon, Paul T.; Parsek, Matthew R.

2015-01-01

Microbially catalyzed precipitation of carbonate minerals is an important process in diverse biological, geological, and engineered systems. However, the processes that regulate carbonate biomineralization and their impacts on biofilms are largely unexplored, mainly because of the inability of current methods to directly observe biomineralization within biofilms. Here, we present a method for in situ, real-time imaging of biomineralization in biofilms and use it to show that Pseudomonas aeruginosa biofilms produce morphologically distinct carbonate deposits that substantially modify biofilm structures. The patterns of carbonate biomineralization produced in situ were substantially different from those caused by accumulation of particles produced by abiotic precipitation. Contrary to the common expectation that mineral precipitation should occur at the biofilm surface, we found that biomineralization started at the base of the biofilm. The carbonate deposits grew over time, detaching biofilm-resident cells and deforming the biofilm morphology. These findings indicate that biomineralization is a general regulator of biofilm architecture and properties. PMID:26276112

Multiscale deformation behavior for multilayered steel by in-situ FE-SEM

NASA Astrophysics Data System (ADS)

Tanaka, Y.; Kishimoto, S.; Yin, F.; Kobayashi, M.; Tomimatsu, T.; Kagawa, K.

2010-03-01

The multi-scale deformation behavior of multi-layered steel during tensile loading was investigated by in-situ FE-SEM observation coupled with multi-scale pattern. The material used was multi-layered steel sheet consisting of martensitic and austenitic stainless steel layers. Prior to in-situ tensile testing, the multi-scale pattern combined with a grid and random dots were fabricated by electron beam lithography on the polished surface in the area of 1 mm2 to facilitate direct observation of multi-scale deformation. Both of the grids with pitches of 10 μm and a random speckle pattern ranging from 200 nm to a few μm sizes were drawn onto the specimen surface at same location. The electron moiré method was applied to measure the strain distribution in the deformed specimens at a millimeter scale and digital images correlation method was applied to measure the in-plane deformation and strain distribution at a micron meter scale acquired before and after at various increments of straining. The results showed that the plastic deformation in the austenitic stainless steel layer was larger than the martensitic steel layer at millimeter scale. However, heterogeneous intrinsic grain-scale plastic deformation was clearly observed and it increased with increasing the plastic deformation.

ASAR images a diverse set of deformation patterns at Kilauea volcano, Hawai'i

USGS Publications Warehouse

Poland, Michael P.

2007-01-01

Since 2003, 27 independent look angles have been acquired by ENVISAT’s Advanced Synthetic Aperture Radar (ASAR) instrument over the island of Hawai`i, allowing for the formation of thousands of interferograms showing deformation of the ground surface. On Kīlauea volcano, a transition from minor to broad-scale summit inflation was observed by interferograms that span 2003 to 2006. In addition, radar interferometry (InSAR) observations of Kīlauea led to the discovery of several previously unknown areas of localized subsidence in the caldera and along the volcano’s east rift zone. These features are probably caused by the cooling and contraction of accumulated lavas. After November 2005, a surface instability near the point that lava entered the ocean on the south flank of Kīlauea was observed in interferograms. The motion is most likely a result of unbuttressing of a portion of the coast following the collapse of a large lava delta in November 2005. InSAR data can also be used to map lava flow development over time, providing ~30 m spatial resolution maps at approximately monthly intervals. Future applications of InSAR to Kīlauea will probably result in more discoveries and insights, both as the style of volcano deformation changes and as data from new instruments are acquired.

Modelling ground deformation patterns associated with volcanic processes at the Okataina Volcanic Centre

NASA Astrophysics Data System (ADS)

Holden, L.; Cas, R.; Fournier, N.; Ailleres, L.

2017-09-01

The Okataina Volcanic Centre (OVC) is one of two large active rhyolite centres in the modern Taupo Volcanic Zone (TVZ) in the North Island of New Zealand. It is located in a complex section of the Taupo rift, a tectonically active section of the TVZ. The most recent volcanic unrest at the OVC includes the 1315 CE Kaharoa and 1886 Tarawera eruptions. Current monitoring activity at the OVC includes the use of continuous GPS receivers (cGPS), lake levelling and seismographs. The ground deformation patterns preceding volcanic activity the OVC are poorly constrained and restricted to predictions from basic modelling and comparison to other volcanoes worldwide. A better understanding of the deformation patterns preceding renewed volcanic activity is essential to determine if observed deformation is related to volcanic, tectonic or hydrothermal processes. Such an understanding also means that the ability of the present day cGPS network to detect these deformation patterns can also be assessed. The research presented here uses the finite element (FE) modelling technique to investigate ground deformation patterns associated with magma accumulation and diking processes at the OVC in greater detail. A number of FE models are produced and tested using Pylith software and incorporate characteristics of the 1315 CE Kaharoa and 1886 Tarawera eruptions, summarised from the existing body of research literature. The influence of a simple ring fault structure at the OVC on the modelled deformation is evaluated. The ability of the present-day continuous GPS (cGPS) GeoNet monitoring network to detect or observe the modelled deformation is also considered. The results show the modelled horizontal and vertical displacement fields have a number of key features, which include prominent lobe based regions extending northwest and southeast of the OVC. The results also show that the ring fault structure increases the magnitude of the displacements inside the caldera, in particular in the vicinity of the southern margin. As a result, some of the cGPS stations in the vicinity of the OVC are more important for measuring deformation related to volcanic processes than others. The results have important implications for how any future observed deformation at the OVC is observed and interpreted.

A Morphospace for Reef Fishes: Elongation Is the Dominant Axis of Body Shape Evolution

PubMed Central

Claverie, Thomas; Wainwright, Peter C.

2014-01-01

Tropical reef fishes are widely regarded as being perhaps the most morphologically diverse vertebrate assemblage on earth, yet much remains to be discovered about the scope and patterns of this diversity. We created a morphospace of 2,939 species spanning 56 families of tropical Indo-Pacific reef fishes and established the primary axes of body shape variation, the phylogenetic consistency of these patterns, and whether dominant patterns of shape change can be accomplished by diverse underlying changes. Principal component analysis showed a major axis of shape variation that contrasts deep-bodied species with slender, elongate forms. Furthermore, using custom methods to compare the elongation vector (axis that maximizes elongation deformation) and the main vector of shape variation (first principal component) for each family in the morphospace, we showed that two thirds of the families diversify along an axis of body elongation. Finally, a comparative analysis using a principal coordinate analysis based on the angles among first principal component vectors of each family shape showed that families accomplish changes in elongation with a wide range of underlying modifications. Some groups such as Pomacentridae and Lethrinidae undergo decreases in body depth with proportional increases in all body regions, while other families show disproportionate changes in the length of the head (e.g., Labridae), the trunk or caudal region in all combinations (e.g., Pempheridae and Pinguipedidae). In conclusion, we found that evolutionary changes in body shape along an axis of elongation dominates diversification in reef fishes. Changes in shape on this axis are thought to have immediate implications for swimming performance, defense from gape limited predators, suction feeding performance and access to some highly specialized habitats. The morphological modifications that underlie changes in elongation are highly diverse, suggesting a role for a range of developmental processes and functional consequences. PMID:25409027

a Research on Monitoring Surface Deformation and Relationships with Surface Parameters in Qinghai Tibetan Plateau Permafrost

NASA Astrophysics Data System (ADS)

Mi, S. J.; Li, Y. T.; Wang, F.; Li, L.; Ge, Y.; Luo, L.; Zhang, C. L.; Chen, J. B.

2017-09-01

The Qinghai Tibetan Plateau permafrost has been the largest permafrost region in middle-low latitude in the world for its high altitude. For the large area permafrost, especially surface deformation brought by it, have serious influence on the road engineering, road maintaining and regional economic development. Consequently, it is essential to monitor the surface deformation and study factors that influent it. We monitored an area named Wudaoliang from July 25, 2015 to June 1, 2016 and 15 Sentinel images were obtained during this time. The area we chose is about 35 kilometers long and 2 kilometers wide, and the national road 109 of China passes through the area. The traditional PS-INSAR (Persistent Scatterer Interferometric Synthetic Aperture Radar) method is not suitable because less historical images in the research area and leading to the number of PS (Persistent Scatterer) points is not enough to obtain accurate deformation results. Therefore, in this paper, we used another method which named QUASI-PSInSAR (QUASI Persistent Scatterer Interferometric Synthetic Aperture Radar) to acquire deformation for it has the advantage to weaken or eliminate the effects of spatial and temporal correlation, which has proved by other scholar. After processing 15 images in the SARproz software, we got the conclusions that, 1) the biggest deformation velocity in the whole area was about 127.9mm/year and about 109.3 mm/year in the road; 2) apparent deformation which have surface deformation more than 30mm/year was about 1.7Km in the road. Meanwhile, soil moisture(SM), Land surface temperature (LST) and surface water(SW), which are primary parameters of the land surface over the same time were reversed by using Sentinel data, Landsat data and ZY-3 data, respectively. After analyzing SM, LST , SW and deformation, we obtained that wet areas which had bigger SM, lower LST and more SW, had greater percentage of severe deformation than arid areas; besides, deformation pattern were different in arid areas and wet areas. During the research time, frost heaving firstly accounted for a large proportion both in the arid and wet areas with the decrease of downward radiation from July to December; after December, thaw settlement came into prominence with the increase downward radiation in the arid areas, while in the wet areas, surface put into diverse situations because of water transformation leading to severe deformation. In summary, soil moisture is an important factor that influences the surface deformation. This relationship between deformation process and soil moisture will be researched more in our further work.

Gait patterns in hemiplegic patients with equinus foot deformity.

PubMed

Manca, M; Ferraresi, G; Cosma, M; Cavazzuti, L; Morelli, M; Benedetti, M G

2014-01-01

Equinus deformity of the foot is a common feature of hemiplegia, which impairs the gait pattern of patients. The aim of the present study was to explore the role of ankle-foot deformity in gait impairment. A hierarchical cluster analysis was used to classify the gait patterns of 49 chronic hemiplegic patients with equinus deformity of the foot, based on temporal-distance parameters and joint kinematic measures obtained by an innovative protocol for motion assessment in the sagittal, frontal, and transverse planes, synthesized by parametrical analysis. Cluster analysis identified five subgroups of patients with homogenous levels of dysfunction during gait. Specific joint kinematic abnormalities were found, according to the speed of progression in each cluster. Patients with faster walking were those with less ankle-foot complex impairment or with reduced range of motion of ankle-foot complex, that is with a stiff ankle-foot complex. Slow walking was typical of patients with ankle-foot complex instability (i.e., larger motion in all the planes), severe equinus and hip internal rotation pattern, and patients with hip external rotation pattern. Clustering of gait patterns in these patients is helpful for a better understanding of dysfunction during gait and delivering more targeted treatment.

Description Of Scoliotic Deformity Pattern By Harmonic Functions

NASA Astrophysics Data System (ADS)

Drerup, Burkhard; Hierholzer, Eberhard

1989-04-01

Frontal radiographs of scoliotic deformity of the spine reveal a characteristic pattern of lateral deviation, lateral tilt and axial rotation of vertebrae. In order to study interrelations between deformation parameters 478 radiographs of idiopathic scolioses, 23 of scolioses after Wilms-tumor treatment and 18 of scolioses following poliomyelitis were digitized. From these the curves of lateral deviation, tilt and rotation are calculated and fitted by Fourier series. By restriction to the first harmonic, analysis reduces to the analysis of a single phase and amplitude for each curve. Justification of this simplification will be discussed. Results provide a general geometric description of scoliotic deformity.

Crustal deformation, the earthquake cycle, and models of viscoelastic flow in the asthenosphere

NASA Technical Reports Server (NTRS)

Cohen, S. C.; Kramer, M. J.

1983-01-01

The crustal deformation patterns associated with the earthquake cycle can depend strongly on the rheological properties of subcrustal material. Substantial deviations from the simple patterns for a uniformly elastic earth are expected when viscoelastic flow of subcrustal material is considered. The detailed description of the deformation pattern and in particular the surface displacements, displacement rates, strains, and strain rates depend on the structure and geometry of the material near the seismogenic zone. The origin of some of these differences are resolved by analyzing several different linear viscoelastic models with a common finite element computational technique. The models involve strike-slip faulting and include a thin channel asthenosphere model, a model with a varying thickness lithosphere, and a model with a viscoelastic inclusion below the brittle slip plane. The calculations reveal that the surface deformation pattern is most sensitive to the rheology of the material that lies below the slip plane in a volume whose extent is a few times the fault depth. If this material is viscoelastic, the surface deformation pattern resembles that of an elastic layer lying over a viscoelastic half-space. When the thickness or breath of the viscoelastic material is less than a few times the fault depth, then the surface deformation pattern is altered and geodetic measurements are potentially useful for studying the details of subsurface geometry and structure. Distinguishing among the various models is best accomplished by making geodetic measurements not only near the fault but out to distances equal to several times the fault depth. This is where the model differences are greatest; these differences will be most readily detected shortly after an earthquake when viscoelastic effects are most pronounced.

Coordination of Cellular Dynamics Contributes to Tooth Epithelium Deformations

PubMed Central

Morita, Ritsuko; Kihira, Miho; Nakatsu, Yousuke; Nomoto, Yohei; Ogawa, Miho; Ohashi, Kazumasa; Mizuno, Kensaku; Tachikawa, Tetsuhiko; Ishimoto, Yukitaka; Morishita, Yoshihiro; Tsuji, Takashi

2016-01-01

The morphologies of ectodermal organs are shaped by appropriate combinations of several deformation modes, such as invagination and anisotropic tissue elongation. However, how multicellular dynamics are coordinated during deformation processes remains to be elucidated. Here, we developed a four-dimensional (4D) analysis system for tracking cell movement and division at a single-cell resolution in developing tooth epithelium. The expression patterns of a Fucci probe clarified the region- and stage-specific cell cycle patterns within the tooth germ, which were in good agreement with the pattern of the volume growth rate estimated from tissue-level deformation analysis. Cellular motility was higher in the regions with higher growth rates, while the mitotic orientation was significantly biased along the direction of tissue elongation in the epithelium. Further, these spatio-temporal patterns of cellular dynamics and tissue-level deformation were highly correlated with that of the activity of cofilin, which is an actin depolymerization factor, suggesting that the coordination of cellular dynamics via actin remodeling plays an important role in tooth epithelial morphogenesis. Our system enhances the understanding of how cellular behaviors are coordinated during ectodermal organogenesis, which cannot be observed from histological analyses. PMID:27588418

Temperature and field direction dependences of first-order reversal curve (FORC) diagrams of hot-deformed Nd-Fe-B magnets

NASA Astrophysics Data System (ADS)

Yomogita, Takahiro; Okamoto, Satoshi; Kikuchi, Nobuaki; Kitakami, Osamu; Sepehri-Amin, Hossein; Ohkubo, Tadakatsu; Hono, Kazuhiro; Akiya, Takahiro; Hioki, Keiko; Hattori, Atsushi

2018-02-01

First-order reversal curve (FORC) diagram has been previously adopted for the analyses of magnetization reversal process and/or quantitative evaluation of coercivity and interaction field dispersions in various magnetic samples. Although these kinds of information are valuable for permanent magnets, previously reported FORC diagrams of sintered Nd-Fe-B magnets exhibit very complicated patterns. In this paper, we have studied the FORC diagrams of hot-deformed Nd-Fe-B magnets under various conditions. Contrary to the previous reports on sintered Nd-Fe-B magnets, the FORC diagram of the hot-deformed Nd-Fe-B magnet exhibits a very simple pattern consisting of a strong spot and a weak line. From this FORC diagram pattern, it is revealed that the coercivity dispersion of the hot-deformed Nd-Fe-B magnets is surprisingly small. Moreover, this feature of the FORC diagram pattern is very robust and unaffected by changes in various conditions such as grain boundary diffusion process, temperature, and field direction, whereas these conditions significantly change the coercivity and the shape of magnetization curve. This fact indicates that the magnetization reversal process of the hot-deformed Nd-Fe-B magnets is almost unchanged against these conditions.

Intraplate Crustal Deformation Within the Northern Sinai Microplate: Evidence from Paleomagnetic Directions and Mechanical Modeling

NASA Astrophysics Data System (ADS)

Dembo, N.; Granot, R.; Hamiel, Y.

2017-12-01

The intraplate crustal deformation found in the northern part of the Sinai Microplate, located near the northern Dead Sea Fault plate boundary, is examined. Previous studies have suggested that distributed deformation in Lebanon is accommodated by regional uniform counterclockwise rigid block rotations. However, remanent magnetization directions observed near the Lebanese restraining bend are not entirely homogeneous suggesting that an unexplained and complex internal deformation pattern exists. In order to explain the variations in the amount of vertical-axis rotations we construct a mechanical model of the major active faults in the region that simulates the rotational deformation induced by motion along these faults. The rotational pattern calculated by the mechanical modeling predicts heterogeneous distribution of rotations around the faults. The combined rotation field that considers both the fault induced rotations and the already suggested regional block rotations stands in general agreement with the observed magnetization directions. Overall, the modeling results provide a more detailed and complete picture of the deformation pattern in this region and show that rotations induced by motion along the Dead Sea Fault act in parallel to rigid block rotations. Finally, the new modeling results unravel important insights as to the fashion in which crustal deformation is distributed within the northern part of the Sinai Microplate and propose an improved deformational mechanism that might be appropriate for other plate margins as well.

Tectonic Deformation Pattern along the Longmen Shan Fault Zone in Eastern Tibet: Insights from Focal Mechanisms of the Wenchuan and Lushan Earthquake Sequences, Southwestern China

NASA Astrophysics Data System (ADS)

Yi, G.; Vallage, A.; Klinger, Y.; Long, F.; Wang, S.

2017-12-01

760 ML≥3.5 aftershocks of the 2008 Wenchuan earthquake, the 2013 Lushan mainshock and its 87 ML≥3.5 aftershocks were selected to obtain focal mechanism solutions from CAP waveform inversion method (Zhu and Helmberger, 1996), along with strain rosette (Amelung and King, 1997) and Areal strain (As) (Vallage et al., 2014), we aimed to analyze the tectonic deformation pattern along the Longmen Shan (LMS) fault zone, southwestern China. The As values show that 93% compressional earthquakes for the Lushan sequence are of pure thrust for the southern segment of the LMS fault zone, while only 50% compressional and nearly 40% of strike-slip and oblique-thrust events for the Wenchuan sequence reflect the strike-slip component increase on the central-northern segment of the LMS fault zone, meaning many different faults responsible for the Wenchuan aftershock activity. The strain rosettes with purely NW-trending compressional white lobe for the entire 87 aftershocks and 4 different classes of magnitudes are very similar to that of the Lushan mainshock. We infer that the geological structures for the southern segment are of thrust faulting under NW compressional deformation. The strain rosettes exhibit self-similarity in terms of orientation and shape for all classes, reflecting that the deformation pattern of the southern segment is independent with earthquake size, and suggesting that each class is representative of the overall deformation for the southern segment. We obtained EW-oriented pure compressional strain rosette of the entire 760 aftershocks and NW-oriented white lobe with small NE-oriented black lobe of the Wenchuan mainshock, and this difference may reflect different tectonic deformation pattern during the co-seismic and post-seismic stages. The deformation segmentation along the Wenchuan coseismic surface rupture is also evidenced from the different orientation of strain rosettes, i.e., NW for the southern area, NE for the central and NNW for the northern parts. The above inferences indicate a very complicated tectonic deformation pattern related to the complex geological structure. The segment of the northern aftershock area without ruptures behaves an oblique compressional deformation.

Quantifying near-field and off-fault deformation patterns of the 1992 Mw 7.3 Landers earthquake

NASA Astrophysics Data System (ADS)

Milliner, Christopher W. D.; Dolan, James F.; Hollingsworth, James; Leprince, Sebastien; Ayoub, Francois; Sammis, Charles G.

2015-05-01

Coseismic surface deformation in large earthquakes is typically measured using field mapping and with a range of geodetic methods (e.g., InSAR, lidar differencing, and GPS). Current methods, however, either fail to capture patterns of near-field coseismic surface deformation or lack preevent data. Consequently, the characteristics of off-fault deformation and the parameters that control it remain poorly understood. We develop a standardized method to fully measure the surface, near-field, coseismic deformation patterns at high resolution using the COSI-Corr program by correlating pairs of aerial photographs taken before and after the 1992 Mw 7.3 Landers earthquake. COSI-Corr offers the advantage of measuring displacement across the entire zone of surface deformation and over a wider aperture than that available to field geologists. For the Landers earthquake, our measured displacements are systematically larger than the field measurements, indicating the presence of off-fault deformation. We show that 46% of the total surface displacement occurred as off-fault deformation, over a mean deformation width of 154 m. The magnitude and width of off-fault deformation along the rupture is primarily controlled by the macroscopic structural complexity of the fault system, with a weak correlation with the type of near-surface materials through which the rupture propagated. Both the magnitude and width of distributed deformation are largest in stepovers, bends, and at the southern termination of the surface rupture. We find that slip along the surface rupture exhibits a consistent degree of variability at all observable length scales and that the slip distribution is self-affine fractal with dimension of 1.56.

3D Computational Mechanics Elucidate the Evolutionary Implications of Orbit Position and Size Diversity of Early Amphibians

PubMed Central

Marcé-Nogué, Jordi; Fortuny, Josep; De Esteban-Trivigno, Soledad; Sánchez, Montserrat; Gil, Lluís; Galobart, Àngel

2015-01-01

For the first time in vertebrate palaeontology, the potential of joining Finite Element Analysis (FEA) and Parametrical Analysis (PA) is used to shed new light on two different cranial parameters from the orbits to evaluate their biomechanical role and evolutionary patterns. The early tetrapod group of Stereospondyls, one of the largest groups of Temnospondyls is used as a case study because its orbits position and size vary hugely within the members of this group. An adult skull of Edingerella madagascariensis was analysed using two different cases of boundary and loading conditions in order to quantify stress and deformation response under a bilateral bite and during skull raising. Firstly, the variation of the original geometry of its orbits was introduced in the models producing new FEA results, allowing the exploration of the ecomorphology, feeding strategy and evolutionary patterns of these top predators. Secondly, the quantitative results were analysed in order to check if the orbit size and position were correlated with different stress patterns. These results revealed that in most of the cases the stress distribution is not affected by changes in the size and position of the orbit. This finding supports the high mechanical plasticity of this group during the Triassic period. The absence of mechanical constraints regarding the orbit probably promoted the ecomorphological diversity acknowledged for this group, as well as its ecological niche differentiation in the terrestrial Triassic ecosystems in clades as lydekkerinids, trematosaurs, capitosaurs or metoposaurs. PMID:26107295

Non-leaky modes and bandgaps of surface acoustic waves in wrinkled stiff-film/compliant-substrate bilayers

NASA Astrophysics Data System (ADS)

Li, Guo-Yang; Xu, Guoqiang; Zheng, Yang; Cao, Yanping

2018-03-01

Surface acoustic wave (SAW) devices have found a wide variety of technical applications, including SAW filters, SAW resonators, microfluidic actuators, biosensors, flow measurement devices, and seismic wave shields. Stretchable/flexible electronic devices, such as sensory skins for robotics, structural health monitors, and wearable communication devices, have received considerable attention across different disciplines. Flexible SAW devices are essential building blocks for these applications, wherein piezoelectric films may need to be integrated with the compliant substrates. When piezoelectric films are much stiffer than soft substrates, SAWs are usually leaky and the devices incorporating them suffer from acoustic losses. In this study, the propagation of SAWs in a wrinkled bilayer system is investigated, and our analysis shows that non-leaky modes can be achieved by engineering stress patterns through surface wrinkles in the system. Our analysis also uncovers intriguing bandgaps (BGs) related to the SAWs in a wrinkled bilayer system; these are caused by periodic deformation patterns, which indicate that diverse wrinkling patterns could be used as metasurfaces for controlling the propagation of SAWs.

Pattern size tolerance of reverse offset printing: a proximity deformation effect related to local PDMS slipping

NASA Astrophysics Data System (ADS)

Kusaka, Yasuyuki; Kanazawa, Shusuke; Koutake, Masayoshi; Ushijima, Hirobumi

2017-10-01

We investigated the shape integrity of silver nanoparticle ink patterns formed by reverse offset printing, focusing particularly on the proximity effect of neighbouring patterns due to the local deformation of a polydimethylsiloxane (PDMS) blanket during contact with a hard cliché. We performed printing tests using a cliché having circular patterns with smaller neighbouring circles located at various distances (2-20 µm), and the results revealed that as we decrease the thickness of PDMS and the inter-pattern gap distance, and as we increase the printing indentations, the shape integrity of the printed pattern was worsened. A complementary numerical simulation of PDMS deformations suggested that the pattern distortion during the contact with clichés was caused by the horizontal deformation of PDMS during the printing, which becomes a significant burden when the uplifted region of PDMS is closer to the gap distance of each pattern. Our analysis further indicates that during printing, there is slipping of the ink at the PDMS interface. In addition, we examined the effects of a synchronization mismatch in a roll-to-sheet printing on the pattern size tolerance. The magnitude of the size distortions was severely influenced not only by the mismatch ratio but also by the nip width. This result verifies the scraping of the ink accompanied by the slipping of the PDMS during the printing process, and thereby determines the size tolerance of printed patterns in reverse offset printing. Finally, we discuss the optimization of process parameters to ensure the size integrity of reverse offset printing.

Dynamic model of intrusion of magma and/or magmatic fluids in the large-scale deformation source of the Campi Flegrei caldera (Italy).

NASA Astrophysics Data System (ADS)

Crescentini, Luca; Amoruso, Antonella; Luongo, Annamaria

2015-04-01

The Campi Flegrei (CF) caldera is located in a densely populated area close to Naples (Southern Italy). It is renowned as a site of continual slow vertical movements. After the last eruption in 1538, the caldera generally subsided until 1969 when minor uplift occurred. In the early 1970s this uplift became significant (~1.5 m max). A further large uplift episode occurred from 1982 to 1984 (~1.8 m max), and subsequently smaller uplift episodes have occurred since then. Amoruso et al. (2014a,b) have recently shown that the CF surface deformation field from 1980 to 2013 can be decomposed into two stationary parts. Large-scale deformation can be explained by a quasi-horizontal source, oriented NW to SE and mathematically represented by a pressurized finite triaxial ellipsoid (PTE) ~4 km deep, possibly related to the injection of magma and/or magmatic fluids from a deeper magma chamber into a sill, or pressurization of interconnected (micro)cavities. Residual deformation not accounted for by PTE is confined to the Solfatara fumarolic area and can be mathematically explained by a small (point) pressurized oblate spheroid (PS) ~2 km below the Solfatara fumarolic field, that has been equated with a poroelastic response of the substratum to pore pressure increases near the injection point of hot magmatic fluids into the hydrothermal system. A satisfying feature of this double source model is that the geometric source parameters of each are constant over the period 1980-2013 with the exception of volume changes (potencies). Several papers have ascribed CF deformation to the injection of magmatic fluids at the base of the hydrothermal system. All models predict complex spatial and temporal evolution of the deformation pattern and consequently contrast with the observed deformation pattern stationarity. Also recently proposed dynamic models of sill intrusion in a shallow volcanic environment do not satisfy the observed CF deformation pattern stationarity. We have developed an analytical dynamic model of intrusion of magma or injection of supercritical fluids in the PTE. Propagation is governed by a Navier-Stokes equation for magma intrusion and modelled as creeping flow in porous media (Darcy's law) for supercritical fluids injection. In both cases the ground deformation pattern is constant over time. Using Finite Element Modeling, we also show that the presence of a viscoelastic shell surrounding the PTE amplifies ground deformation, with no appreciable effect on the ground deformation pattern. Thus, our model satisfies the observed CF deformation pattern stationarity both using a purely elastic medium or allowing for stress relaxation close to the PTE, caused by the rock temperature. Amoruso et al. (2014a), J. Geophys. Res., 119 (2), 858-879 Amoruso et al. (2014b), Geophys. Res. Lett., 41 (9), 3081-3088

Cephalopod-inspired design of electro-mechano-chemically responsive elastomers for on-demand fluorescent patterning

NASA Astrophysics Data System (ADS)

Wang, Qiming; Gossweiler, Gregory R.; Craig, Stephen L.; Zhao, Xuanhe

2014-09-01

Cephalopods can display dazzling patterns of colours by selectively contracting muscles to reversibly activate chromatophores - pigment-containing cells under their skins. Inspired by this novel colouring strategy found in nature, we design an electro-mechano-chemically responsive elastomer system that can exhibit a wide variety of fluorescent patterns under the control of electric fields. We covalently couple a stretchable elastomer with mechanochromic molecules, which emit strong fluorescent signals if sufficiently deformed. We then use electric fields to induce various patterns of large deformation on the elastomer surface, which displays versatile fluorescent patterns including lines, circles and letters on demand. Theoretical models are further constructed to predict the electrically induced fluorescent patterns and to guide the design of this class of elastomers and devices. The material and method open promising avenues for creating flexible devices in soft/wet environments that combine deformation, colorimetric and fluorescent response with topological and chemical changes in response to a single remote signal.

The Relation Between Rotation Deformity and Nerve Root Stress in Lumbar Scoliosis

NASA Astrophysics Data System (ADS)

Kim, Ho-Joong; Lee, Hwan-Mo; Moon, Seong-Hwan; Chun, Heoung-Jae; Kang, Kyoung-Tak

Even though several finite element models of lumbar spine were introduced, there has been no model including the neural structure. Therefore, the authors made the novel lumbar spine finite element model including neural structure. Using this model, we investigated the relation between the deformity pattern and nerve root stress. Two lumbar models with different types of curve pattern (lateral bending and lateral bending with rotation curve) were made. In the model of lateral bending curves without rotation, the principal compressive nerve root stress on the concave side was greater than the principal tensile stress on the convex side at the apex vertebra. Contrarily, in the lateral bending curve with rotational deformity, the nerve stress on the convex side was higher than that on the concave side. Therefore, this study elicit that deformity pattern could have significantly influence on the nerve root stress in the lumbar spine.

Development of a Standardized Methodology for the Use of COSI-Corr Sub-Pixel Image Correlation to Determine Surface Deformation Patterns in Large Magnitude Earthquakes.

NASA Astrophysics Data System (ADS)

Milliner, C. W. D.; Dolan, J. F.; Hollingsworth, J.; Leprince, S.; Ayoub, F.

2014-12-01

Coseismic surface deformation is typically measured in the field by geologists and with a range of geophysical methods such as InSAR, LiDAR and GPS. Current methods, however, either fail to capture the near-field coseismic surface deformation pattern where vital information is needed, or lack pre-event data. We develop a standardized and reproducible methodology to fully constrain the surface, near-field, coseismic deformation pattern in high resolution using aerial photography. We apply our methodology using the program COSI-corr to successfully cross-correlate pairs of aerial, optical imagery before and after the 1992, Mw 7.3 Landers and 1999, Mw 7.1 Hector Mine earthquakes. This technique allows measurement of the coseismic slip distribution and magnitude and width of off-fault deformation with sub-pixel precision. This technique can be applied in a cost effective manner for recent and historic earthquakes using archive aerial imagery. We also use synthetic tests to constrain and correct for the bias imposed on the result due to use of a sliding window during correlation. Correcting for artificial smearing of the tectonic signal allows us to robustly measure the fault zone width along a surface rupture. Furthermore, the synthetic tests have constrained for the first time the measurement precision and accuracy of estimated fault displacements and fault-zone width. Our methodology provides the unique ability to robustly understand the kinematics of surface faulting while at the same time accounting for both off-fault deformation and measurement biases that typically complicates such data. For both earthquakes we find that our displacement measurements derived from cross-correlation are systematically larger than the field displacement measurements, indicating the presence of off-fault deformation. We show that the Landers and Hector Mine earthquake accommodated 46% and 38% of displacement away from the main primary rupture as off-fault deformation, over a mean deformation width of 183 m and 133 m, respectively. We envisage that correlation results derived from our methodology will provide vital data for near-field deformation patterns and will be of significant use for constraining inversion solutions for fault slip at depth.

Rietveld analysis of X-ray powder diffraction patterns as a potential tool for the identification of impact-deformed carbonate rocks

NASA Astrophysics Data System (ADS)

Huson, S. A.; Foit, F. F.; Watkinson, A. J.; Pope, M. C.

2009-12-01

Previous X-ray powder diffraction (XRD) studies revealed that shock deformed carbonates and quartz have broader XRD patterns than those of unshocked samples. Entire XRD patterns, single peak profiles and Rietveld refined parameters of carbonate samples from the Sierra Madera impact crater, west Texas, unshocked equivalent samples from 95 miles north of the crater and the Mission Canyon Formation of southwest Montana and western Wyoming were used to evaluate the use of X-ray powder diffraction as a potential tool for distinguishing impact deformed rocks from unshocked and tectonically deformed rocks. At Sierra Madera dolostone and limestone samples were collected from the crater rim (lower shock intensity) and the central uplift (higher shock intensity). Unshocked equivalent dolostone samples were collected from well cores drilled outside of the impact crater. Carbonate rocks of the Mission Canyon Formation were sampled along a transect across the tectonic front of the Sevier and Laramide orogenic belts. Whereas calcite subjected to significant shock intensities at the Sierra Madera impact crater can be differentiated from tectonically deformed calcite from the Mission Canyon Formation using Rietveld refined peak profiles, weakly shocked calcite from the crater rim appears to be indistinguishable from the tectonically deformed calcite. In contrast, Rietveld analysis readily distinguishes shocked Sierra Madera dolomite from unshocked equivalent dolostone samples from outside the crater and tectonically deformed Mission Canyon Formation dolomite.

A mechanical model for deformable and mesh pattern wheel of lunar roving vehicle

NASA Astrophysics Data System (ADS)

Liang, Zhongchao; Wang, Yongfu; Chen, Gang (Sheng); Gao, Haibo

2015-12-01

As an indispensable tool for astronauts on lunar surface, the lunar roving vehicle (LRV) is of great significance for manned lunar exploration. An LRV moves on loose and soft lunar soil, so the mechanical property of its wheels directly affects the mobility performance. The wheels used for LRV have deformable and mesh pattern, therefore, the existing mechanical theory of vehicle wheel cannot be used directly for analyzing the property of LRV wheels. In this paper, a new mechanical model for LRV wheel is proposed. At first, a mechanical model for a rigid normal wheel is presented, which involves in multiple conventional parameters such as vertical load, tangential traction force, lateral force, and slip ratio. Secondly, six equivalent coefficients are introduced to amend the rigid normal wheel model to fit for the wheels with deformable and mesh-pattern in LRV application. Thirdly, the values of the six equivalent coefficients are identified by using experimental data obtained in an LRV's single wheel testing. Finally, the identified mechanical model for LRV's wheel with deformable and mesh pattern are further verified and validated by using additional experimental results.

2014-2016 Mt. Etna Ground deformation imaged by SISTEM approach using GPS and SENTINEL-1A/1B TOPSAR data

NASA Astrophysics Data System (ADS)

Bonforte, Alessandro; Guglielmino, Francesco; Puglisi, Giuseppe

2017-04-01

In the frame of the EC FP7 MED-SUV project (call FP7 ENV.2012.6.4-2), and thanks to the GEO-GSNL initiative, GPS data and SENTINEL 1A/1B TOPSAR acquired on Mt. Etna between October 2014 and November 2016 were analyzed. The SENTINEL data were used in order to combine and integrate them with GPS, and detail the ground deformation recorded by GPS on Mt. Etna, during the last two-year's volcanic activity. The Sentinel data were processed by GAMMA software, using a spectral diversity method and a procedure able to co-register the SENTINEL pairs with extremely high precision (< 0.01 pixel). In order to optimize the time processing, a new software architecture based on the hypervisor virtualization technology for the x64 versions of Windows has been implemented. The DInSAR results are analysed and successively used as input for the time series analysis using the StaMPS package. On December 28, 2014 eruptive activity resumed at Mt. Etna with a fire fountain activity feeding two lava flows spreading on the eastern and south-western upper flanks of the volcano, producing evident deformation at the summit of the volcano. GPS displacements and Sentinel-1A ascending interferogram were calculated in order to image the ground deformation pattern accompanying the eruption. The ground deformation pattern has been perfectly depicted by the GPS network, mainly affecting the uppermost part of the volcano edifice, with a strong decay of the deformation, according to a very shallow and strong dyke intrusion. The Sentinel 1A SAR data, covering the similar time spanning, confirmed that most of displacements are related to the dike intrusion, and evidenced a local gravity-driven motion of the western wall of the Valle del Bove, probably related to the dike intrusion. To monitor the temporal successive evolution of ground deformation, we performed an A-DInSAR SENTINEL analysis using the Small BAseline Subset (SBAS) approach included with the StaMPS processing package. The April 2015-December 2015, SBAS Time series, shown a volcano inflation, with an uplift of about 28 mm localized in the central and western area of the volcano. Suddenly, in the first days of December 2015, volcanic activity abruptly restarted at the central crater with a very strongly explosive eruption; this kind of activity continued, with a decreasing intensity, with other episodes at the same crater and then involving, in turn, all the other three summit craters of the volcano. On December 8, when the eruptive activity was concluding, a seismic swarm affected the uppermost part of the Pernicana fault where it joins the NE-Rift. The SBAS time series have then been integrated by the SISTEM algorithm with the ground displacements measured by two GPS surveys carried out on the NE flank of the volcano at the end of April and in mid-December 2015. Results of this data integration provide a very detailed picture of the ground deformation pattern on the volcano, preceding and accompanying the vigorous eruption and the seismic swarm; besides the general inflation of the edifice during the pre-eruptive period. The January 2016 - November 2016 is the last period analyzed, characterized by the kinematic of the eastern unstable flank, with displacement involving both the Pernicana fault and the other structures dissecting this sector of the volcano.

Study of the crater deformation of the CODELCO/Andina mine using the satellite and ground data

NASA Astrophysics Data System (ADS)

Caverlotti-Silva, M. A.; Arellano-Baeza, A. A.

2011-12-01

The correct monitoring of the subsidence of the craters related to the underground mine exploitation is one of the most important endeavors of the satellite remote sensing. The ASTER and LANDSAT satellite images have been used to study the deformation of the crater of the CODELCO/Andina mine, Valparaiso Region, Chile. The high-resolution satellite images were used to detect changes in the lineament patterns related to the subsidence. These results were compared with the ground deformation extracted from the GPS and topography station networks. It was found that sudden changes in the lineament patterns appear when the ground deformation overcomes a definite threshold.

Diversity, distribution, and morphological deformities among living Foraminifera in hypersaline Salwa Bay, Saudi Arabia

NASA Astrophysics Data System (ADS)

Olalekan Amao, Abduljamiu; Kaminski, Michael

2016-04-01

The Arabian Gulf is considered a naturally stressed environment due to extremes of salinity and summer temperatures. Anthropogenic influences such as rapid urbanisation projects, maritime transport, and large numbers of desalination plants and oil-related activities compounds the problem. Foraminifera are known to be resilient under such stressful conditions. The purpose of our study is to document the foraminiferal diversity and abundance in the hypersaline Salwa Bay area, near the Saudi Arabian-Qatar Border. We expect the foraminiferal fauna in Salwa Bay to be adapted to extremes in salinity, and we wish to document any species that might be endemic or uniquely adapted to the area. Shannon-Wiener index, relative abundance, species richness, and the percentage of morphological deformities were determined for samples collected from the bay. Salwa Bay is the most saline extension of the Arabian Gulf with high salinity, water temperature and evaporation rate, which is attributed to slow flushing rates, coral reef barriers and higher residency time of the water. Environmental parameters measured at the time of collection were depth (10-110 cm), salinity (52.6-53.0) total dissolved solids (48.8-49.4 g/l), and temperature (27-27.6°C). The foraminiferal assemblages in Salwa Bay are dominated by porcelaneous foraminifera, which include Peneroplis pertusus, Peneroplis planatus, Coscinospira hemprichii and Coscinospira acicularis. The most common species across the sampled transect is Peneroplis pertusus. Hyaline species were also found, but agglutinated foraminifera are absent. Diversity in Salwa Bay is lower compared with localities that have "normal" salinity, and many of the foraminifera display conspicuous morphological deformities. Approximately 55% of the assemblage exhibits mild to severe deformities such as fusion of two adults or double tests, protuberance on the spiral side, abnormal arrangement of the chambers, abnormal shape of the proloculus and modification of the coiling plane in several chambers. We speculate that the combination of high summer temperatures and salinities may be the main cause of the deformities and comparatively low diversity.

Orbital shape in intentional skull deformations and adult sagittal craniosynostoses.

PubMed

Sandy, Ronak; Hennocq, Quentin; Nysjö, Johan; Giran, Guillaume; Friess, Martin; Khonsari, Roman Hossein

2018-06-21

Intentional cranial deformations are the result of external mechanical forces exerted on the skull vault that modify the morphology of various craniofacial structures such as the skull base, the orbits and the zygoma. In this controlled study, we investigated the 3D shape of the orbital inner mould and the orbital volume in various types of intentional deformations and in adult non-operated scaphocephaly - the most common type of craniosynostosis - using dedicated morphometric methods. CT scans were performed on 32 adult skulls with intentional deformations, 21 adult skull with scaphocephaly and 17 non-deformed adult skulls from the collections of the Muséum national d'Histoire naturelle in Paris, France. The intentional deformations group included six skulls with Toulouse deformations, eight skulls with circumferential deformations and 18 skulls with antero-posterior deformations. Mean shape models were generated based on a semi-automatic segmentation technique. Orbits were then aligned and compared qualitatively and quantitatively using colour-coded distance maps and by computing the mean absolute distance, the Hausdorff distance, and the Dice similarity coefficient. Orbital symmetry was assessed after mirroring, superimposition and Dice similarity coefficient computation. We showed that orbital shapes were significantly and symmetrically modified in intentional deformations and scaphocephaly compared with non-deformed control skulls. Antero-posterior and circumferential deformations demonstrated a similar and severe orbital deformation pattern resulting in significant smaller orbital volumes. Scaphocephaly and Toulouse deformations had similar deformation patterns but had no effect on orbital volumes. This study showed that intentional deformations and scaphocephaly significantly interact with orbital growth. Our approach was nevertheless not sufficient to identify specific modifications caused by the different types of skull deformations or by scaphocephaly. © 2018 Anatomical Society.

Pattern palette for complex fluid flows

NASA Astrophysics Data System (ADS)

Sandnes, B.

2012-04-01

From landslides to oil and gas recovery to the squeeze of a toothpaste tube, flowing complex fluids are everywhere around us in nature and engineering. That is not to say, though, that they are always well understood. The dissipative interactions, through friction and inelastic collisions, often give rise to nonlinear dynamics and complexity manifested in pattern formation on large scales. The images displayed on this poster illustrate the diverse morphologies found in multiphase flows involving wet granular material: Air is injected into a generic mixture of granular material and fluid contained in a 500 µm gap between two parallel glass plates. At low injection rates, friction between the grains - glass beads averaging 100 µm in diameter - dominates the rheology, producing "stick-slip bubbles" and labyrinthine frictional fingering. A transition to various other morphologies, including "corals" and viscous fingers, emerges for increasing injection rate. At sufficiently high granular packing fractions, the material behaves like a deformable, porous solid, and the air rips through in sudden fractures.

Modeling of thermomechanical changes of extreme-ultraviolet mask and their dependence on absorber variation

NASA Astrophysics Data System (ADS)

Ban, Chung-Hyun; Park, Eun-Sang; Park, Jae-Hun; Oh, Hye-Keun

2018-06-01

Thermal and structural deformation of extreme-ultraviolet lithography (EUVL) masks during the exposure process may become important issues as these masks are subject to rigorous image placement and flatness requirements. The reflective masks used for EUVL absorb energy during exposure, and the temperature of the masks rises as a result. This can cause thermomechanical deformation that can reduce the pattern quality. The use of very thick low-thermal-expansion substrate materials (LTEMs) may reduce energy absorption, but they do not completely eliminate mask deformation. Therefore, it is necessary to predict and optimize the effects of energy transferred from the extreme-ultraviolet (EUV) light source and the resultant patterns of structured EUV masks with complex multilayers. Our study shows that heat accumulates in the masks as exposure progresses. It has been found that a higher absorber ratio (pattern density) applied to the patterning of EUV masks exacerbates the problem, especially in masks with more complex patterns.

Spatiotemporal Patterns of Precipitation-Modulated Landslide Deformation From Independent Component Analysis of InSAR Time Series

NASA Astrophysics Data System (ADS)

Cohen-Waeber, J.; Bürgmann, R.; Chaussard, E.; Giannico, C.; Ferretti, A.

2018-02-01

Long-term landslide deformation is disruptive and costly in urbanized environments. We rely on TerraSAR-X satellite images (2009-2014) and an improved data processing algorithm (SqueeSAR™) to produce an exceptionally dense Interferometric Synthetic Aperture Radar ground deformation time series for the San Francisco East Bay Hills. Independent and principal component analyses of the time series reveal four distinct spatial and temporal surface deformation patterns in the area around Blakemont landslide, which we relate to different geomechanical processes. Two components of time-dependent landslide deformation isolate continuous motion and motion driven by precipitation-modulated pore pressure changes controlled by annual seasonal cycles and multiyear drought conditions. Two components capturing more widespread seasonal deformation separate precipitation-modulated soil swelling from annual cycles that may be related to groundwater level changes and thermal expansion of buildings. High-resolution characterization of landslide response to precipitation is a first step toward improved hazard forecasting.

Seismic anisotropy and large-scale deformation of the Eastern Alps

NASA Astrophysics Data System (ADS)

Bokelmann, Götz; Qorbani, Ehsan; Bianchi, Irene

2013-12-01

Mountain chains at the Earth's surface result from deformation processes within the Earth. Such deformation processes can be observed by seismic anisotropy, via the preferred alignment of elastically anisotropic minerals. The Alps show complex deformation at the Earth's surface. In contrast, we show here that observations of seismic anisotropy suggest a relatively simple pattern of internal deformation. Together with earlier observations from the Western Alps, the SKS shear-wave splitting observations presented here show one of the clearest examples yet of mountain chain-parallel fast orientations worldwide, with a simple pattern nearly parallel to the trend of the mountain chain. In the Eastern Alps, the fast orientations do not connect with neighboring mountain chains, neither the present-day Carpathians, nor the present-day Dinarides. In that region, the lithosphere is thin and the observed anisotropy thus resides within the asthenosphere. The deformation is consistent with the eastward extrusion toward the Pannonian basin that was previously suggested based on seismicity and surface geology.

Numerical models of caldera deformation: Effects of multiphase and multicomponent hydrothermal fluid flow

USGS Publications Warehouse

Hutnak, M.; Hurwitz, S.; Ingebritsen, S.E.; Hsieh, P.A.

2009-01-01

Ground surface displacement (GSD) in large calderas is often interpreted as resulting from magma intrusion at depth. Recent advances in geodetic measurements of GSD, notably interferometric synthetic aperture radar, reveal complex and multifaceted deformation patterns that often require complex source models to explain the observed GSD. Although hydrothermal fluids have been discussed as a possible deformation agent, very few quantitative studies addressing the effects of multiphase flow on crustal mechanics have been attempted. Recent increases in the power and availability of computing resources allow robust quantitative assessment of the complex time-variant thermal interplay between aqueous fluid flow and crustal deformation. We carry out numerical simulations of multiphase (liquid-gas), multicomponent (H 2O-CO2) hydrothermal fluid flow and poroelastic deformation using a range of realistic physical parameters and processes. Hydrothermal fluid injection, circulation, and gas formation can generate complex, temporally and spatially varying patterns of GSD, with deformation rates, magnitudes, and geometries (including subsidence) similar to those observed in several large calderas. The potential for both rapid and gradual deformation resulting from magma-derived fluids suggests that hydrothermal fluid circulation may help explain deformation episodes at calderas that have not culminated in magmatic eruption.

A Comparative Study of Random Patterns for Digital Image Correlation

NASA Astrophysics Data System (ADS)

Stoilov, G.; Kavardzhikov, V.; Pashkouleva, D.

2012-06-01

Digital Image Correlation (DIC) is a computer based image analysis technique utilizing random patterns, which finds applications in experimental mechanics of solids and structures. In this paper a comparative study of three simulated random patterns is done. One of them is generated according to a new algorithm, introduced by the authors. A criterion for quantitative evaluation of random patterns after the calculation of their autocorrelation functions is introduced. The patterns' deformations are simulated numerically and realized experimentally. The displacements are measured by using the DIC method. Tensile tests are performed after printing the generated random patterns on surfaces of standard iron sheet specimens. It is found that the new designed random pattern keeps relatively good quality until reaching 20% deformation.

Shape equivalence under perspective and projective transformations.

PubMed

Wagemans, J; Lamote, C; Van Gool, L

1997-06-01

When a planar shape is viewed obliquely, it is deformed by a perspective deformation. If the visual system were to pick up geometrical invariants from such projections, these would necessarily be invariant under the wider class of projective transformations. To what extent can the visual system tell the difference between perspective and nonperspective but still projective deformations of shapes? To investigate this, observers were asked to indicate which of two test patterns most resembled a standard pattern. The test patterns were related to the standard pattern by a perspective or projective transformation, or they were completely unrelated. Performance was slightly better in a matching task with perspective and unrelated test patterns (92.6%) than in a projective-random matching task (88.8%). In a direct comparison, participants had a small preference (58.5%) for the perspectively related patterns over the projectively related ones. Preferences were based on the values of the transformation parameters (slant and shear). Hence, perspective and projective transformations yielded perceptual differences, but they were not treated in a categorically different manner by the human visual system.

A novel 3D deformation measurement method under optical microscope for micro-scale bulge-test

NASA Astrophysics Data System (ADS)

Wu, Dan; Xie, Huimin

2017-11-01

A micro-scale 3D deformation measurement method combined with optical microscope is proposed in this paper. The method is based on gratings and phase shifting algorithm. By recording the grating images before and after deformation from two symmetrical angles and calculating the phases of the grating patterns, the 3D deformation field of the specimen can be extracted from the phases of the grating patterns. The proposed method was applied to the micro-scale bulge test. A micro-scale thermal/mechanical coupling bulge-test apparatus matched with the super-depth microscope was exploited. With the gratings fabricated onto the film, the deformed morphology of the bulged film was measured reliably. The experimental results show that the proposed method and the exploited bulge-test apparatus can be used to characterize the thermal/mechanical properties of the films at micro-scale successfully.

Results from a model-independent method of monitoring a geodetic network for patterns of transient deformation

NASA Technical Reports Server (NTRS)

Hurst, Kenneth; Granat, Robert

2005-01-01

We have implmented two multi-station detectors for transient crustal deformation within the Southern California Integrated GPS (SCGIN). One the the primary goals of SCIGN is to detect transient deformation associated with the earthquake cycle in Southern California.

Wavefront correction performed by a deformable mirror of arbitrary actuator pattern within a multireflection waveguide.

PubMed

Ma, Xingkun; Huang, Lei; Bian, Qi; Gong, Mali

2014-09-10

The wavefront correction ability of a deformable mirror with a multireflection waveguide was investigated and compared via simulations. By dividing a conventional actuator array into a multireflection waveguide that consisted of single-actuator units, an arbitrary actuator pattern could be achieved. A stochastic parallel perturbation algorithm was proposed to find the optimal actuator pattern for a particular aberration. Compared with conventional an actuator array, the multireflection waveguide showed significant advantages in correction of higher order aberrations.

Impact of Sauropod Dinosaurs on Lagoonal Substrates in the Broome Sandstone (Lower Cretaceous), Western Australia

PubMed Central

Thulborn, Tony

2012-01-01

Existing knowledge of the tracks left by sauropod dinosaurs (loosely ‘brontosaurs’) is essentially two-dimensional, derived mainly from footprints exposed on bedding planes, but examples in the Broome Sandstone (Early Cretaceous) of Western Australia provide a complementary three-dimensional picture showing the extent to which walking sauropods could deform the ground beneath their feet. The patterns of deformation created by sauropods traversing thinly-stratified lagoonal deposits of the Broome Sandstone are unprecedented in their extent and structural complexity. The stacks of transmitted reliefs (underprints or ghost prints) beneath individual footfalls are nested into a hierarchy of deeper and more inclusive basins and troughs which eventually attain the size of minor tectonic features. Ultimately the sauropod track-makers deformed the substrate to such an extent that they remodelled the topography of the landscape they inhabited. Such patterns of substrate deformation are revealed by investigating fragmentary and eroded footprints, not by the conventional search for pristine footprints on intact bedding planes. For that reason it is not known whether similar patterns of substrate deformation might occur at sauropod track-sites elsewhere in the world. PMID:22662116

Plastic deformation of a magnesium oxide 001-plane surface produced by cavitation

NASA Technical Reports Server (NTRS)

Hattori, S.; Miyoshi, K.; Buckley, D. H.; Okada, T.

1986-01-01

An investigation was conducted to examine plastic deformation of a cleaved single-crystal magnesium oxide 001-plane surface exposed to cavitation. Cavitation damage experiments were carried out in distilled water at 25 C by using a magnetostrictive oscillator in close proximity (2 mm) to the surface of the cleaved specimen. The dislocation-etch-pit patterns induced by cavitation were examined and compared with that of microhardness indentations. The results revealed that dislocation-etch-pit patterns around hardness indentations contain both screw and edge dislocations, while the etch-pit patterns on the surface exposed to cavitation contain only screw dislocations. During cavitation, deformation occurred in a thin surface layer, accompanied by work-hardening of the ceramic. The row of screw dislocations underwent a stable growth, which was analyzed crystallographically.

Wrinkling and Folding on Patched Elastic Surfaces: Modulation of the Chemistry and Pattern Size of Microwrinkled Surfaces.

PubMed

Nogales, Aurora; Del Campo, Adolfo; Ezquerra, Tiberio A; Rodriguez-Hernández, Juan

2017-06-14

An unconventional strategy is proposed that takes advantage of localized high-deformation areas, referred to as folded wrinkles, to produce microstructured elastic surfaces with precisely controlled pattern dimensions and chemical distribution. For that purpose, elastic PDMS substrates were prestretched to a different extent and oxidized in particular areas using a mask. When the stretching was removed, the PDMS substrate exhibited out-of-plane deformations that largely depend on the applied prestretching. Prestretchings below 100% lead to affine deformations in which the treated areas are buckled. On the contrary, prestretchings above ε >100% prior to surface treatment induce the formation of folded wrinkles on those micrometer-size ultraviolet-ozone (UVO) treated areas upon relaxation. As a result, dual periodic wrinkles were formed due to the alternation of highly deformed (folded) and low deformed (buckled) areas. Our strategy is based on the surface treatment at precise positions upon prestretching of the elastic substrate (PDMS). Additionally, this approach can be used to template the formation of wrinkled surfaces by alternating lines of folded wrinkles (valleys) and low-deformed areas (hills). This effect allowed us to precisely tune the shape and distribution of the UVO exposed areas by varying the prestretching direction. Moreover, the wrinkle characteristics, including period and amplitude, exhibit a direct relation to the dimensions of the patterns present in the mask.

Deformations of superconformal theories

DOE PAGES

Córdova, Clay; Dumitrescu, Thomas T.; Intriligator, Kenneth

2016-11-22

Here, we classify possible supersymmetry-preserving relevant, marginal, and irrelevant deformations of unitary superconformal theories in d ≥ 3 dimensions. Our method only relies on symmetries and unitarity. Hence, the results are model independent and do not require a Lagrangian description. Two unifying themes emerge: first, many theories admit deformations that reside in multiplets together with conserved currents. Such deformations can lead to modifications of the supersymmetry algebra by central and noncentral charges. Second, many theories with a sufficient amount of supersymmetry do not admit relevant or marginal deformations, and some admit neither. The classification is complicated by the fact thatmore » short superconformal multiplets display a rich variety of sporadic phenomena, including supersymmetric deformations that reside in the middle of a multiplet. We illustrate our results with examples in diverse dimensions. In particular, we explain how the classification of irrelevant supersymmetric deformations can be used to derive known and new constraints on moduli-space effective actions.« less

Comparison of epicardial deformation in passive and active isolated rabbit hearts

NASA Astrophysics Data System (ADS)

Ho, Andrew; Tang, Liang; Chiang, Fu-Pen; Lin, Shien-Fong

2007-02-01

Mechanical deformation of isolated rabbit hearts through passive inflation techniques have been a viable form of replicating heart motion, but its relation to the heart's natural active contractions remain unclear. The mechanical properties of the myocardium may show diverse characteristics while in tension and compression. In this study, epicardial strain was measured with the assistance of computer-aided speckle interferometry (CASI)1. CASI tracks the movement of clusters of particles for measuring epicardial deformation. The heart was cannulated and perfused with Tyrode's solution. Silicon carbide particles were applied onto the myocardium to form random speckle pattern images while the heart was allowed to actively contract and stabilize. High resolution videos (1000x1000 pixels) of the left ventricle were taken with a complementary metal oxide semiconductor (CMOS) camera as the heart was actively contracting through electrical pacing at various cycle lengths between 250-800 ms. A latex balloon was then inserted into the left ventricle via left atrium and videos were taken as the balloon was repeatedly inflated and deflated at controlled volumes (1-3 ml/cycle). The videos were broken down into frames and analyzed through CASI. Active contractions resulted in non-uniform circular epicardial and uniaxial contractions at different stages of the motion. In contrast, the passive heart demonstrated very uniform expansion and contraction originating from the source of the latex balloon. The motion of the active heart caused variations in deformation, but in comparison to the passive heart, had a more enigmatic displacement field. The active heart demonstrated areas of large displacement and others with relatively no displacement. Application of CASI was able to successfully distinguish the motions between the active and passive hearts.

Holocene Flexural Deformation over the Nile Delta: Evidence from Radar Interferometry

NASA Astrophysics Data System (ADS)

Gebremichael, E.; Sultan, M.; Becker, R.

2017-12-01

Isostatic adjustment and subsequent subsidence and uplift due to sediment and water loading and unloading mechanisms is one of the major factors that produce regional deformational patterns across river deltas. Using 84 Envisat ASAR scenes that were acquired (2004 - 2010) along three tracks and applying Persistent scatterer (PS) radar interferometric techniques, we documented flexural deformational patterns over the entire Nile Delta (length: 186 km; width: 240 km) of Egypt. The passive continental margin of Africa subsided from Jurassic time onwards due to isostatic loading creating an accommodation space and consequently, the deposition of relatively younger sediments on the oceanic crust. In river deltas, the flexural isostasy model dictates that a subsidence in the oceanic crust side should be balanced by a bulge (uplift) in the flanking regions. Using radar interferometry, we were able to identify the flexural deformation pattern and map its spatial extent over the northern and central Nile Delta region. Findings include: (1) the northern Nile Delta region (block) is separated from the southern delta region by an east-west trending, extensively faulted, hinge line that signifies the boundary between two deformational patterns (subsidence and uplift). It separates the highly subsiding (up to 9.8 mm/yr) northern delta block (up to 85 km long) from the nearly stable (0.4 mm/yr; averaged) southern delta block (up to 91 km long). The hinge line marks the end of the passive continental margin of Africa and the beginning of the oceanic crust of the Mediterranean. (2) We mapped the extent of a 20-40 km wide flexural uplift zone to the south of the hinge line. Within the flexural uplift zone (2.5 mm/yr; averaged), there is a gradual increase in uplift rate reaching peak value (up to 7 mm/yr) near the midpoint of the zone. (3) The uplift rate gradually decreases south of the flexure boundary reaching 0.3 mm/yr at the southern periphery of the delta. (4) The flexural deformation pattern is interrupted (replaced by subsidence) in some areas due to local deformation caused by high groundwater extraction rates in western (6 mm/yr) and gas extraction in north central delta (9 mm/yr).

Stress and deformation characteristics of sea ice in a high resolution numerical sea ice model.

NASA Astrophysics Data System (ADS)

Heorton, Harry; Feltham, Daniel; Tsamados, Michel

2017-04-01

The drift and deformation of sea ice floating on the polar oceans is due to the applied wind and ocean currents. The deformations of sea ice over ocean basin length scales have observable patterns; cracks and leads in satellite images and within the velocity fields generated from floe tracking. In a climate sea ice model the deformation of sea ice over ocean basin length scales is modelled using a rheology that represents the relationship between stresses and deformation within the sea ice cover. Here we investigate the link between observable deformation characteristics and the underlying internal sea ice stresses and force balance using the Los Alamos numerical sea ice climate model. In order to mimic laboratory experiments on the deformation of small cubes of sea ice we have developed an idealised square domain that tests the model response at spatial resolutions of up to 500m. We use the Elastic Anisotropic Plastic and Elastic Viscous Plastic rheologies, comparing their stability over varying resolutions and time scales. Sea ice within the domain is forced by idealised winds in order to compare the confinement of wind stresses and internal sea ice stresses. We document the characteristic deformation patterns of convergent, divergent and rotating stress states.

Persistent Scatterer Interferometry analysis of ground deformation in the Po Plain (Piacenza-Reggio Emilia sector, Northern Italy): seismo-tectonic implications

NASA Astrophysics Data System (ADS)

Antonielli, Benedetta; Monserrat, Oriol; Bonini, Marco; Cenni, Nicola; Devanthéry, Núria; Righini, Gaia; Sani, Federico

2016-08-01

This work aims to explore the ongoing tectonic activity of structures in the outermost sector of the Northern Apennines, which represents the active leading edge of the thrust belt and is dominated by compressive deformation. We have applied the Persistent Scatterer Interferometry (PSI) technique to obtain new insights into the present-day deformation pattern of the frontal area of the Northern Apennine. PSI has proved to be effective in detecting surface deformation of wide regions involved in low tectonic movements. We used 34 Envisat images in descending geometry over the period of time between 2004 and 2010, performing about 300 interferometric pairs. The analysis of the velocity maps and of the PSI time-series has allowed to observe ground deformation over the sector of the Po Plain between Piacenza and Reggio Emilia. The time-series of permanent GPS stations located in the study area, validated the results of the PSI technique, showing a good correlation with the PS time-series. The PS analysis reveals the occurrence of a well-known subsidence area on the rear of the Ferrara arc, mostly connected to the exploitation of water resources. In some instances, the PS velocity pattern reveals ground uplift (with mean velocities ranging from 1 to 2.8 mm yr-1) above active thrust-related anticlines of the Emilia and Ferrara folds, and part of the Pede-Apennine margin. We hypothesize a correlation between the observed uplift deformation pattern and the growth of the thrust-related anticlines. As the uplift pattern corresponds to known geological features, it can be used to constrain the seismo-tectonic setting, and a working hypothesis may involve that the active Emilia and Ferrara thrust folds would be characterized by interseismic periods possibly dominated by aseismic creep.

Reliability of calculation of the lithosphere deformations in tectonically stable area of Poland based on the GPS measurements

NASA Astrophysics Data System (ADS)

Araszkiewicz, Andrzej; Jarosiński, Marek

2013-04-01

In this research we aimed to check if the GPS observations can be used for calculation of a reliable deformation pattern of the intracontinental lithosphere in seismically inactive areas, such as territory of Poland. For this purpose we have used data mainly from the ASG-EUPOS permanent network and the solutions developed by the MUT CAG team (Military University of Technology: Centre of Applied Geomatics). From the 128 analyzed stations almost 100 are mounted on buildings. Daily observations were processed in the Bernese 5.0 software and next the weekly solutions were used to determine the station velocities expressed in ETRF2000. The strain rates were determined for almost 200 triangles with GPS stations in their corners plotted used Delaunay triangulation. The obtained scattered directions of deformations and highly changeable values of strain rates point to insufficient antennas' stabilization as for geodynamical studies. In order to depict badly stabilized stations we carried out a benchmark test to show what might be the effect of one station drift on deformations in contacting triangles. Based on the benchmark results, from our network we have eliminated the stations which showed deformation pattern characteristic for instable station. After several rounds of strain rate calculations and eliminations of dubious points we have reduced the number of stations down to 60. The refined network revealed more consistent deformation pattern across Poland. Deformations compared with the recent stress field of the study area disclosed good correlation in some places and significant discrepancies in the others, which will be the subject of future research.

Polyethylene damage and deformation on fixed-bearing, non-conforming unicondylar knee replacements corresponding to progressive changes in alignment and fixation.

PubMed

Harman, Melinda K; Schmitt, Sabine; Rössing, Sven; Banks, Scott A; Sharf, Hans-Peter; Viceconti, Marco; Hodge, W Andrew

2010-07-01

Deviations from nominal alignment of unicondylar knee replacements impact knee biomechanics, including the load and stress distribution at the articular contact surfaces. This study characterizes relationships between the biomechanical environment, distinguished by progressive changes in alignment and fixation, and articular damage and deformation in a consecutive series of retrieved unicondylar knee replacements. Twenty seven fixed-bearing, non-conforming unicondylar knee replacements of one design were retrieved after 2 to 13 years of in vivo function. The in vivo biomechanical environment was characterized by grading component migration measured from full-length radiographs and grading component fixation based on intraoperative manual palpation. Articular damage patterns and linear deformation on the polyethylene inserts were measured using optical photogrammetry and contact point digitization. Articular damage patterns and surface deformation on the explanted polyethylene inserts corresponded to progressive changes in component alignment and fixation. Component migration produced higher deformation rates, whereas loosening contributed to larger damage areas but lower deformation rates. Migration and loosening of the femoral component, but not the tibial component, were factors contributing to large regions of abrasion concentrated on the articular periphery. Classifying component migration and fixation at revision proved useful for distinguishing common biomechanical conditions associated with the varied polyethylene damage patterns and linear deformation for this fixed-bearing, non-conforming design. Pre-clinical evaluations of unicondylar knee replacements that are capable of reproducing variations in clinical alignment and predicting the observed wear mechanisms are necessary to better understand the impact of knee biomechanics and design on unicondylar knee replacement longevity. Copyright (c) 2010 Elsevier Ltd. All rights reserved.

Using the two-way shape memory effect of NiTi to control surface texture for cellular mechanotransduction

NASA Astrophysics Data System (ADS)

Liang, Yuan; Qin, Haifeng; Hou, Xiaoning; Doll, Gary L.; Ye, Chang; Dong, Yalin

2018-07-01

Mechanical force can crucially affect form and function of cells, and play critical roles in many diseases. While techniques to conveniently apply mechanical force to cells are limited, we fabricate a surface actuator prototype for cellular mechanotransduction by imparting severe plastic deformation into the surface of shape memory alloy (SMA). Using ultrasonic nanocrystal surface modification (UNSM), a deformation-based surface engineering technique with high controllability, micro surface patterns can be generated on the surface of SMA so that the micro-size cell can conform to the pattern; meanwhile, phase transformation can be induced in the subsurface by severe plastic deformation. By controlling plastic deformation and phase transformation, it is possible to establish a quantitative relation between deformation and temperature. When cells are cultured on the UNSM-treated surface, such surface can dynamically deform in response to external temperature change, and therefore apply controllable mechanical force to cells. Through this study, we demonstrate a novel way to fabricate a low-cost surface actuator that has the potential to be used for high-throughput cellular mechanotransduction.

Contour junctions defined by dynamic image deformations enhance perceptual transparency.

PubMed

Kawabe, Takahiro; Nishida, Shin'ya

2017-11-01

The majority of work on the perception of transparency has focused on static images with luminance-defined contour junctions, but recent work has shown that dynamic image sequences with dynamic image deformations also provide information about transparency. The present study demonstrates that when part of a static image is dynamically deformed, contour junctions at which deforming and nondeforming contours are connected facilitate the deformation-based perception of a transparent layer. We found that the impression of a transparent layer was stronger when a dynamically deforming area was adjacent to static nondeforming areas than when presented alone. When contour junctions were not formed at the dynamic-static boundaries, however, the impression of a transparent layer was not facilitated by the presence of static surrounding areas. The effect of the deformation-defined junctions was attenuated when the spatial pattern of luminance contrast at the junctions was inconsistent with the perceived transparency related to luminance contrast, while the effect did not change when the spatial luminance pattern was consistent with it. In addition, the results showed that contour completions across the junctions were required for the perception of a transparent layer. These results indicate that deformation-defined junctions that involve contour completion between deforming and nondeforming regions enhance the perception of a transparent layer, and that the deformation-based perceptual transparency can be promoted by the simultaneous presence of appropriately configured luminance and contrast-other features that can also by themselves produce the sensation of perceiving transparency.

Eliminating the zero spectrum in Fourier transform profilometry using empirical mode decomposition.

PubMed

Li, Sikun; Su, Xianyu; Chen, Wenjing; Xiang, Liqun

2009-05-01

Empirical mode decomposition is introduced into Fourier transform profilometry to extract the zero spectrum included in the deformed fringe pattern without the need for capturing two fringe patterns with pi phase difference. The fringe pattern is subsequently demodulated using a standard Fourier transform profilometry algorithm. With this method, the deformed fringe pattern is adaptively decomposed into a finite number of intrinsic mode functions that vary from high frequency to low frequency by means of an algorithm referred to as a sifting process. Then the zero spectrum is separated from the high-frequency components effectively. Experiments validate the feasibility of this method.

Image Correlation Pattern Optimization for Micro-Scale In-Situ Strain Measurements

NASA Technical Reports Server (NTRS)

Bomarito, G. F.; Hochhalter, J. D.; Cannon, A. H.

2016-01-01

The accuracy and precision of digital image correlation (DIC) is a function of three primary ingredients: image acquisition, image analysis, and the subject of the image. Development of the first two (i.e. image acquisition techniques and image correlation algorithms) has led to widespread use of DIC; however, fewer developments have been focused on the third ingredient. Typically, subjects of DIC images are mechanical specimens with either a natural surface pattern or a pattern applied to the surface. Research in the area of DIC patterns has primarily been aimed at identifying which surface patterns are best suited for DIC, by comparing patterns to each other. Because the easiest and most widespread methods of applying patterns have a high degree of randomness associated with them (e.g., airbrush, spray paint, particle decoration, etc.), less effort has been spent on exact construction of ideal patterns. With the development of patterning techniques such as microstamping and lithography, patterns can be applied to a specimen pixel by pixel from a patterned image. In these cases, especially because the patterns are reused many times, an optimal pattern is sought such that error introduced into DIC from the pattern is minimized. DIC consists of tracking the motion of an array of nodes from a reference image to a deformed image. Every pixel in the images has an associated intensity (grayscale) value, with discretization depending on the bit depth of the image. Because individual pixel matching by intensity value yields a non-unique scale-dependent problem, subsets around each node are used for identification. A correlation criteria is used to find the best match of a particular subset of a reference image within a deformed image. The reader is referred to references for enumerations of typical correlation criteria. As illustrated by Schreier and Sutton and Lu and Cary systematic errors can be introduced by representing the underlying deformation with under-matched shape functions. An important implication, as discussed by Sutton et al., is that in the presence of highly localized deformations (e.g., crack fronts), error can be reduced by minimizing the subset size. In other words, smaller subsets allow the more accurate resolution of localized deformations. Contrarily, the choice of optimal subset size has been widely studied and a general consensus is that larger subsets with more information content are less prone to random error. Thus, an optimal subset size balances the systematic error from under matched deformations with random error from measurement noise. The alternative approach pursued in the current work is to choose a small subset size and optimize the information content within (i.e., optimizing an applied DIC pattern), rather than finding an optimal subset size. In the literature, many pattern quality metrics have been proposed, e.g., sum of square intensity gradient (SSSIG), mean subset fluctuation, gray level co-occurrence, autocorrelation-based metrics, and speckle-based metrics. The majority of these metrics were developed to quantify the quality of common pseudo-random patterns after they have been applied, and were not created with the intent of pattern generation. As such, it is found that none of the metrics examined in this study are fit to be the objective function of a pattern generation optimization. In some cases, such as with speckle-based metrics, application to pixel by pixel patterns is ill-conditioned and requires somewhat arbitrary extensions. In other cases, such as with the SSSIG, it is shown that trivial solutions exist for the optimum of the metric which are ill-suited for DIC (such as a checkerboard pattern). In the current work, a multi-metric optimization method is proposed whereby quality is viewed as a combination of individual quality metrics. Specifically, SSSIG and two auto-correlation metrics are used which have generally competitive objectives. Thus, each metric could be viewed as a constraint imposed upon the others, thereby precluding the achievement of their trivial solutions. In this way, optimization produces a pattern which balances the benefits of multiple quality metrics. The resulting pattern, along with randomly generated patterns, is subjected to numerical deformations and analyzed with DIC software. The optimal pattern is shown to outperform randomly generated patterns.

Fortuna Tessera, Venus - Evidence of horizontal convergence and crustal thickening

NASA Technical Reports Server (NTRS)

Vorder Bruegge, R. W.; Head, J. W.

1989-01-01

Structural and tectonic patterns mapped in Fortuna Tessera are interpreted to reflect a change in the style and intensity of deformation from east to west, beginning with simple tessera terrain at relatively low topographic elevations in the east and progressing through increasingly complex deformation patterns and higher topography to Maxwell Montes in the West. These morphologic and topographic patterns are consistent with east-to-west convergence and compression and the increasing elevations are interpreted to be due to crustal thickening processes associated with the convergent deformational environment. Using an Airy isostatic model, crustal thicknesses of approximately 35 km for the initial tessera terrain, and crustal thicknesses of over 100 km for the Maxwell Montes region are predicted. Detailed mapping with Magellan data will permit the deconvolution of individual components and structures in this terrain.

The orientation distribution of tunneling-related quantities

NASA Astrophysics Data System (ADS)

Seif, W. M.; Refaie, A. I.; Botros, M. M.

2018-03-01

In the nuclear tunneling processes involving deformed nuclei, most of the tunneling-related quantities depend on the relative orientations of the participating nuclei. In the presence of different multipole deformations, we study the variation of a few relevant quantities for the α-decay and the sub-barrier fusion processes, in an orientation degree of freedom. The knocking frequency and the penetration probability are evaluated within the Wentzel-Kramers-Brillouin approximation. The interaction potential is calculated with Skyrme-type nucleon-nucleon interaction. We found that the width of the potential pocket, the Coulomb barrier radius, the penetration probability, the α-decay width, and the fusion cross-section follow consistently the orientation-angle variation of the radius of the deformed nucleus. The orientation distribution patterns of the pocket width, the barrier radius, the logarithms of the penetrability, the decay width, and the fusion cross-section are found to be highly analogous to pattern of the deformed-nucleus radius. The curve patterns of the orientation angle distributions of the internal pocket depth, the Coulomb barrier height and width, as well as the knocking frequency simulate inversely the variation of the deformed nucleus radius. The predicted orientation behaviors will be of a special interest in predicting the optimum orientations for the tunneling processes.

Proof-of-feasibility of using well bore deformation as a diagnostic tool to improve CO 2 sequestration

DOE Office of Scientific and Technical Information (OSTI.GOV)

Murdoch, Larry; Moysey, Stephen; Germanovich, Leonid

Injecting CO 2 raises pore pressure and this causes subsurface formations to deform. The pattern and amount of deformation will reflect the distribution of pressure and formation properties in the subsurface, two quantities of interest during CO 2 storage. The hypothesis underlying this research is that the small deformation accompanying CO 2 storage can be measured and interpreted to improve the storage process.

Response of deformation patterns to reorganizations of the southern San Andreas fault system since ca. 1.5 Ma

NASA Astrophysics Data System (ADS)

Cooke, M. L.; Fattaruso, L.; Dorsey, R. J.; Housen, B. A.

2015-12-01

Between ~1.5 and 1.1 Ma, the southern San Andreas fault system underwent a major reorganization that included initiation of the San Jacinto fault and termination of slip on the extensional West Salton detachment fault. The southern San Andreas fault itself has also evolved since this time, with several shifts in activity among fault strands within San Gorgonio Pass. We use three-dimensional mechanical Boundary Element Method models to investigate the impact of these changes to the fault network on deformation patterns. A series of snapshot models of the succession of active fault geometries explore the role of fault interaction and tectonic loading in abandonment of the West Salton detachment fault, initiation of the San Jacinto fault, and shifts in activity of the San Andreas fault. Interpreted changes to uplift patterns are well matched by model results. These results support the idea that growth of the San Jacinto fault led to increased uplift rates in the San Gabriel Mountains and decreased uplift rates in the San Bernardino Mountains. Comparison of model results for vertical axis rotation to data from paleomagnetic studies reveals a good match to local rotation patterns in the Mecca Hills and Borrego Badlands. We explore the mechanical efficiency at each step in the evolution, and find an overall trend toward increased efficiency through time. Strain energy density patterns are used to identify regions of off-fault deformation and potential incipient faulting. These patterns support the notion of north-to-south propagation of the San Jacinto fault during its initiation. The results of the present-day model are compared with microseismicity focal mechanisms to provide additional insight into the patterns of off-fault deformation within the southern San Andreas fault system.

Altitudinal Patterns of Species Diversity and Phylogenetic Diversity across Temperate Mountain Forests of Northern China.

PubMed

Zhang, Wenxin; Huang, Dizhou; Wang, Renqing; Liu, Jian; Du, Ning

2016-01-01

The spatial patterns of biodiversity and their underlying mechanisms have been an active area of research for a long time. In this study, a total of 63 samples (20m × 30m) were systematically established along elevation gradients on Mount Tai and Mount Lao, China. We explored altitudinal patterns of plant diversity in the two mountain systems. In order to understand the mechanisms driving current diversity patterns, we used phylogenetic approaches to detect the spatial patterns of phylogenetic diversity and phylogenetic structure along two elevation gradients. We found that total species richness had a monotonically decreasing pattern and tree richness had a unimodal pattern along the elevation gradients in the two study areas. However, altitudinal patterns in shrub richness and herbs richness were not consistent on the two mountains. At low elevation, anthropogenic disturbances contributed to the increase of plant diversity, especially for shrubs and herbs in understory layers, which are more sensitive to changes in microenvironment. The phylogenetic structure of plant communities exhibited an inverted hump-shaped pattern along the elevation gradient on Mount Tai, which demonstrates that environmental filtering is the main driver of plant community assembly at high and low elevations and inter-specific competition may be the main driver of plant community assembly in the middle elevations. However, the phylogenetic structure of plant communities did not display a clear pattern on Mount Lao where the climate is milder. Phylogenetic beta diversity and species beta diversity consistently increased with increasing altitudinal divergence in the two study areas. However, the altitudinal patterns of species richness did not completely mirror phylogenetic diversity patterns. Conservation areas should be selected taking into consideration the preservation of high species richness, while maximizing phylogenetic diversity to improve the potential for diversification in the future.

Volcano geodesy in the Cascade arc, USA

NASA Astrophysics Data System (ADS)

Poland, Michael P.; Lisowski, Michael; Dzurisin, Daniel; Kramer, Rebecca; McLay, Megan; Pauk, Ben

2017-08-01

Experience during historical time throughout the Cascade arc and the lack of deep-seated deformation prior to the two most recent eruptions of Mount St. Helens might lead one to infer that Cascade volcanoes are generally quiescent and, specifically, show no signs of geodetic change until they are about to erupt. Several decades of geodetic data, however, tell a different story. Ground- and space-based deformation studies have identified surface displacements at five of the 13 major Cascade arc volcanoes that lie in the USA (Mount Baker, Mount St. Helens, South Sister, Medicine Lake, and Lassen volcanic center). No deformation has been detected at five volcanoes (Mount Rainier, Mount Hood, Newberry Volcano, Crater Lake, and Mount Shasta), and there are not sufficient data at the remaining three (Glacier Peak, Mount Adams, and Mount Jefferson) for a rigorous assessment. In addition, gravity change has been measured at two of the three locations where surveys have been repeated (Mount St. Helens and Mount Baker show changes, while South Sister does not). Broad deformation patterns associated with heavily forested and ice-clad Cascade volcanoes are generally characterized by low displacement rates, in the range of millimeters to a few centimeters per year, and are overprinted by larger tectonic motions of several centimeters per year. Continuous GPS is therefore the best means of tracking temporal changes in deformation of Cascade volcanoes and also for characterizing tectonic signals so that they may be distinguished from volcanic sources. Better spatial resolution of volcano deformation can be obtained through the use of campaign GPS, semipermanent GPS, and interferometric synthetic aperture radar observations, which leverage the accumulation of displacements over time to improve signal to noise. Deformation source mechanisms in the Cascades are diverse and include magma accumulation and withdrawal, post-emplacement cooling of recent volcanic deposits, magmatic-tectonic interactions, and loss of volatiles plus densification of magma. The Cascade Range thus offers an outstanding opportunity for investigating a wide range of volcanic processes. Indeed, there may be areas of geodetic change that have yet to be discovered, and there is good potential for addressing a number of important questions about how arc volcanoes work before, during, and after eruptions by continuing geodetic research in the Cascade Range.

Volcano geodesy in the Cascade arc, USA

USGS Publications Warehouse

Poland, Michael; Lisowski, Michael; Dzurisin, Daniel; Kramer, Rebecca; McLay, Megan; Pauk, Benjamin

2017-01-01

Experience during historical time throughout the Cascade arc and the lack of deep-seated deformation prior to the two most recent eruptions of Mount St. Helens might lead one to infer that Cascade volcanoes are generally quiescent and, specifically, show no signs of geodetic change until they are about to erupt. Several decades of geodetic data, however, tell a different story. Ground- and space-based deformation studies have identified surface displacements at five of the 13 major Cascade arc volcanoes that lie in the USA (Mount Baker, Mount St. Helens, South Sister, Medicine Lake, and Lassen volcanic center). No deformation has been detected at five volcanoes (Mount Rainier, Mount Hood, Newberry Volcano, Crater Lake, and Mount Shasta), and there are not sufficient data at the remaining three (Glacier Peak, Mount Adams, and Mount Jefferson) for a rigorous assessment. In addition, gravity change has been measured at two of the three locations where surveys have been repeated (Mount St. Helens and Mount Baker show changes, while South Sister does not). Broad deformation patterns associated with heavily forested and ice-clad Cascade volcanoes are generally characterized by low displacement rates, in the range of millimeters to a few centimeters per year, and are overprinted by larger tectonic motions of several centimeters per year. Continuous GPS is therefore the best means of tracking temporal changes in deformation of Cascade volcanoes and also for characterizing tectonic signals so that they may be distinguished from volcanic sources. Better spatial resolution of volcano deformation can be obtained through the use of campaign GPS, semipermanent GPS, and interferometric synthetic aperture radar observations, which leverage the accumulation of displacements over time to improve signal to noise. Deformation source mechanisms in the Cascades are diverse and include magma accumulation and withdrawal, post-emplacement cooling of recent volcanic deposits, magmatic-tectonic interactions, and loss of volatiles plus densification of magma. The Cascade Range thus offers an outstanding opportunity for investigating a wide range of volcanic processes. Indeed, there may be areas of geodetic change that have yet to be discovered, and there is good potential for addressing a number of important questions about how arc volcanoes work before, during, and after eruptions by continuing geodetic research in the Cascade Range.

Different deformation patterns using GPS in the volcanic process of El Hierro (Canary Island) 2011-2013

NASA Astrophysics Data System (ADS)

García-Cañada, Laura; José García-Arias, María; Pereda de Pablo, Jorge; Lamolda, Héctor; López, Carmen

2014-05-01

Ground deformation is one of the most important parameter in volcano monitoring. The detected deformations in volcanic areas can be precursors of a volcanic activity and contribute with useful information to study the evolution of an unrest, eruption or any volcanic process. GPS is the most common technique used to measure volcano deformations. It can be used to detect slow displacement rates or much larger and faster deformations associated with any volcanic process. In volcanoes the deformation is expected to be a mixed of nature; during periods of quiescence it will be slow or not present, while increased activity slow displacement rates can be detected or much larger and faster deformations can be measure due to magma intrusion, for example in the hours to days prior a eruption beginning. In response to the anomalous seismicity detected at El Hierro in July 2011, the Instituto Geográfico Nacional (IGN) improved its volcano monitoring network in the island with continuous GPS that had been used to measure the ground deformation associated with the precursory unrest since summer 2011, submarine eruption (October 2011-March 2012) and the following unrest periods (2012-2013). The continuous GPS time series, together with other techniques, had been used to evaluate the activity and to detect changes in the process. We investigate changes in the direction and module of the deformation obtained by GPS and they show different patterns in every unrest period, very close to the seismicity locations and migrations.

Neighborhood binary speckle pattern for deformation measurements insensitive to local illumination variation by digital image correlation.

PubMed

Zhao, Jian; Yang, Ping; Zhao, Yue

2017-06-01

Speckle pattern-based characteristics of digital image correlation (DIC) restrict its application in engineering fields and nonlaboratory environments, since serious decorrelation effect occurs due to localized sudden illumination variation. A simple and efficient speckle pattern adjusting and optimizing approach presented in this paper is aimed at providing a novel speckle pattern robust enough to resist local illumination variation. The new speckle pattern, called neighborhood binary speckle pattern, derived from original speckle pattern, is obtained by means of thresholding the pixels of a neighborhood at its central pixel value and considering the result as a binary number. The efficiency of the proposed speckle pattern is evaluated in six experimental scenarios. Experiment results indicate that the DIC measurements based on neighborhood binary speckle pattern are able to provide reliable and accurate results, even though local brightness and contrast of the deformed images have been seriously changed. It is expected that the new speckle pattern will have more potential value in engineering applications.

Thermal input control and enhancement for laser based residual stress measurements using liquid temperature indicating coatings

DOEpatents

Pechersky, M.J.

1999-07-06

An improved method for measuring residual stress in a material is disclosed comprising the steps of applying a spot of temperature indicating coating to the surface to be studied, establishing a speckle pattern surrounds the spot of coating with a first laser then heating the spot of coating with a far infrared laser until the surface plastically deforms. Comparing the speckle patterns before and after deformation by subtracting one pattern from the other will produce a fringe pattern that serves as a visual and quantitative indication of the degree to which the plasticized surface responded to the stress during heating and enables calculation of the stress. 3 figs.

Thermal input control and enhancement for laser based residual stress measurements using liquid temperature indicating coatings

DOEpatents

Pechersky, Martin J.

1999-01-01

An improved method for measuring residual stress in a material comprising the steps of applying a spot of temperature indicating coating to the surface to be studied, establishing a speckle pattern surrounds the spot of coating with a first laser then heating the spot of coating with a far infrared laser until the surface plastically deforms. Comparing the speckle patterns before and after deformation by subtracting one pattern from the other will produce a fringe pattern that serves as a visual and quantitative indication of the degree to which the plasticized surface responded to the stress during heating and enables calculation of the stress.

Topographic Response to the Yakutat Block Collision

NASA Technical Reports Server (NTRS)

Stock, Joann M.

2000-01-01

The principal objective of this grant and this research were to investigate the topographic development of an active glaciated orogenic belt in southern Alaska as that development relates to patterns of erosion and crustal deformation. A specific objective of the research was to investigate feedbacks between mountain building, orographic affects on climate, and patterns of exhumation and rock uplift. To that end, an orogen-scale analysis of topography was conducted with the aid of digital elevation models, magnitudes and patterns of crustal deformation were compiled from existing literature, present and past climate patterns were constrained using the modern and past distribution of glaciers, and styles, magnitudes, and extent of erosion were constrained with observations from the 1998 field season.

Synchronized diffusive-wave spectroscopy: Principle and application to sound propagation in aqueous foams.

PubMed

Crassous, Jérôme; Chasle, Patrick; Pierre, Juliette; Saint-Jalmes, Arnaud; Dollet, Benjamin

2016-03-01

We present an experimental method to measure oscillatory strains in turbid material. The material is illuminated with a laser, and the speckle patterns are recorded. The analysis of the deformations of the optical path length shows that the speckle patterns are modulated at the strain frequency. By recording those patterns synchronously with the strain source, we are able to measure the amplitude and the phase of the strain. This method is tested in the specific case of an aqueous foam where an acoustic wave propagates. The effects of material internal dynamics and heterogeneous deformations are also discussed.

Synchronized diffusive-wave spectroscopy: Principle and application to sound propagation in aqueous foams

NASA Astrophysics Data System (ADS)

Crassous, Jérôme; Chasle, Patrick; Pierre, Juliette; Saint-Jalmes, Arnaud; Dollet, Benjamin

2016-03-01

We present an experimental method to measure oscillatory strains in turbid material. The material is illuminated with a laser, and the speckle patterns are recorded. The analysis of the deformations of the optical path length shows that the speckle patterns are modulated at the strain frequency. By recording those patterns synchronously with the strain source, we are able to measure the amplitude and the phase of the strain. This method is tested in the specific case of an aqueous foam where an acoustic wave propagates. The effects of material internal dynamics and heterogeneous deformations are also discussed.

Taxonomic and Phylogenetic Determinants of Functional Composition of Bolivian Bat Assemblages

PubMed Central

Aguirre, Luis F.; Montaño-Centellas, Flavia A.; Gavilanez, M. Mercedes; Stevens, Richard D.

2016-01-01

Understanding diversity patterns and the potential mechanisms driving them is a fundamental goal in ecology. Examination of different dimensions of biodiversity can provide insights into the relative importance of different processes acting upon biotas to shape communities. Unfortunately, patterns of diversity are still poorly understood in hyper-diverse tropical countries. Here, we assess spatial variation of taxonomic, functional and phylogenetic diversity of bat assemblages in one of the least studied Neotropical countries, Bolivia, and determine whether changes in biodiversity are explained by the replacement of species or functional groups, or by differences in richness (i.e., gain or loss of species or functional groups). Further, we evaluate the contribution of phylogenetic and taxonomic changes in the resulting patterns of functional diversity of bats. Using well-sampled assemblages from published studies we examine noctilionoid bats at ten study sites across five ecoregions in Bolivia. Bat assemblages differed from each other in all dimensions of biodiversity considered; however, diversity patterns for each dimension were likely structured by different mechanisms. Within ecoregions, differences were largely explained by species richness, suggesting that the gain or loss of species or functional groups (as opposed to replacement) was driving dissimilarity patterns. Overall, our results suggest that whereas evolutionary processes (i.e., historical connection and dispersal routes across Bolivia) create a template of diversity patterns across the country, ecological mechanisms modify these templates, decoupling the observed patterns of functional, taxonomic and phylogenetic diversity in Bolivian bats. Our results suggests that elevation represents an important source of variability among diversity patterns for each dimension of diversity considered. Further, we found that neither phylogenetic nor taxonomic diversity can fully account for patterns of functional diversity, highlighting the need for examining different dimensions of biodiversity of bats in hyperdiverse ecosystems. PMID:27384441

Taxonomic and Phylogenetic Determinants of Functional Composition of Bolivian Bat Assemblages.

PubMed

Aguirre, Luis F; Montaño-Centellas, Flavia A; Gavilanez, M Mercedes; Stevens, Richard D

2016-01-01

Understanding diversity patterns and the potential mechanisms driving them is a fundamental goal in ecology. Examination of different dimensions of biodiversity can provide insights into the relative importance of different processes acting upon biotas to shape communities. Unfortunately, patterns of diversity are still poorly understood in hyper-diverse tropical countries. Here, we assess spatial variation of taxonomic, functional and phylogenetic diversity of bat assemblages in one of the least studied Neotropical countries, Bolivia, and determine whether changes in biodiversity are explained by the replacement of species or functional groups, or by differences in richness (i.e., gain or loss of species or functional groups). Further, we evaluate the contribution of phylogenetic and taxonomic changes in the resulting patterns of functional diversity of bats. Using well-sampled assemblages from published studies we examine noctilionoid bats at ten study sites across five ecoregions in Bolivia. Bat assemblages differed from each other in all dimensions of biodiversity considered; however, diversity patterns for each dimension were likely structured by different mechanisms. Within ecoregions, differences were largely explained by species richness, suggesting that the gain or loss of species or functional groups (as opposed to replacement) was driving dissimilarity patterns. Overall, our results suggest that whereas evolutionary processes (i.e., historical connection and dispersal routes across Bolivia) create a template of diversity patterns across the country, ecological mechanisms modify these templates, decoupling the observed patterns of functional, taxonomic and phylogenetic diversity in Bolivian bats. Our results suggests that elevation represents an important source of variability among diversity patterns for each dimension of diversity considered. Further, we found that neither phylogenetic nor taxonomic diversity can fully account for patterns of functional diversity, highlighting the need for examining different dimensions of biodiversity of bats in hyperdiverse ecosystems.

Tertiary thrust systems and fluid flow beneath the Beaufort coastal plain (1002 area), Arctic National Wildlife Refuge, Alaska, U.S.A.

USGS Publications Warehouse

Potter, Christopher J.; Grow, John A.; Perry, William J.; Moore, Thomas E.; O'Sullivan, Paul B.; Phillips, Jeffrey D.; Saltus, Richard W.

2004-01-01

In the eastern part of the 1002 area, a northward-younging pattern of thin-skinned deformation is apparent. Converging patterns of Paleocene reflectors on the north flank of the Sabbath syncline indicate that the Aichilik high and the Sabbath syncline formed as a passive-roof duplex and piggyback basin, respectively, just behind the Paleocene deformation front. During the Eocene and possibly the Oligocene, thin-skinned thrusting advanced northward over the present location of the Niguanak high. A passive-roof duplex occupied the frontal part of this system. The Kingak and Hue shales exposed above the Niguanak high were transported into their present structural position during the Eocene to Oligocene motion on the long thrust ramps above the present south flank of the Niguanak high. Broad, basement-cored subsurface domes (Niguanak high and Aurora dome) formed near the deformation front in the Oligocene, deforming the overlying thin-skinned structures and feeding a new increment of displacement into thin-skinned structures directly to the north. Deformation continued through the Miocene above a detachment in the basement. Offshore seismicity and Holocene shortening documented by previous workers may indicate that contractional deformation continues to the present day.

Dynamic deformation inspection of a human arm by using a line-scan imaging system

NASA Astrophysics Data System (ADS)

Hu, Eryi

2009-11-01

A line-scan imaging system is used in the dynamic deformation measurement of a human arm when the muscle is contracting and relaxing. The measurement principle is based on the projection grating profilometry, and the measuring system is consisted of a line-scan CCD camera, a projector, optical lens and a personal computer. The detected human arm is put upon a reference plane, and a sinusoidal grating is projected onto the object surface and reference plane at an incidence angle, respectively. The deformed fringe pattern in the same line of the dynamic detected arm is captured by the line-scan CCD camera with free trigger model, and the deformed fringe pattern is recorded in the personal computer for processing. A fast Fourier transform combining with a filtering and spectrum shifting method is used to extract the phase information caused by the profile of the detected object. Thus, the object surface profile can be obtained following the geometric relationship between the fringe deformation and the object surface height. Furthermore, the deformation procedure can be obtained line by line. Some experimental results are presented to prove the feasibility of the inspection system.

Biodiversity patterns along ecological gradients: unifying β-diversity indices.

PubMed

Szava-Kovats, Robert C; Pärtel, Meelis

2014-01-01

Ecologists have developed an abundance of conceptions and mathematical expressions to define β-diversity, the link between local (α) and regional-scale (γ) richness, in order to characterize patterns of biodiversity along ecological (i.e., spatial and environmental) gradients. These patterns are often realized by regression of β-diversity indices against one or more ecological gradients. This practice, however, is subject to two shortcomings that can undermine the validity of the biodiversity patterns. First, many β-diversity indices are constrained to range between fixed lower and upper limits. As such, regression analysis of β-diversity indices against ecological gradients can result in regression curves that extend beyond these mathematical constraints, thus creating an interpretational dilemma. Second, despite being a function of the same measured α- and γ-diversity, the resultant biodiversity pattern depends on the choice of β-diversity index. We propose a simple logistic transformation that rids beta-diversity indices of their mathematical constraints, thus eliminating the possibility of an uninterpretable regression curve. Moreover, this transformation results in identical biodiversity patterns for three commonly used classical beta-diversity indices. As a result, this transformation eliminates the difficulties of both shortcomings, while allowing the researcher to use whichever beta-diversity index deemed most appropriate. We believe this method can help unify the study of biodiversity patterns along ecological gradients.

Biodiversity Patterns along Ecological Gradients: Unifying β-Diversity Indices

PubMed Central

Szava-Kovats, Robert C.; Pärtel, Meelis

2014-01-01

Ecologists have developed an abundance of conceptions and mathematical expressions to define β-diversity, the link between local (α) and regional-scale (γ) richness, in order to characterize patterns of biodiversity along ecological (i.e., spatial and environmental) gradients. These patterns are often realized by regression of β-diversity indices against one or more ecological gradients. This practice, however, is subject to two shortcomings that can undermine the validity of the biodiversity patterns. First, many β-diversity indices are constrained to range between fixed lower and upper limits. As such, regression analysis of β-diversity indices against ecological gradients can result in regression curves that extend beyond these mathematical constraints, thus creating an interpretational dilemma. Second, despite being a function of the same measured α- and γ-diversity, the resultant biodiversity pattern depends on the choice of β-diversity index. We propose a simple logistic transformation that rids beta-diversity indices of their mathematical constraints, thus eliminating the possibility of an uninterpretable regression curve. Moreover, this transformation results in identical biodiversity patterns for three commonly used classical beta-diversity indices. As a result, this transformation eliminates the difficulties of both shortcomings, while allowing the researcher to use whichever beta-diversity index deemed most appropriate. We believe this method can help unify the study of biodiversity patterns along ecological gradients. PMID:25330181

Uncovering the deformation mechanisms of origami metamaterials by introducing generic degree-four vertices.

PubMed

Fang, Hongbin; Li, Suyi; Ji, Huimin; Wang, K W

2016-10-01

Origami-based design holds promise for developing new mechanical metamaterials whose overall kinematic and mechanical properties can be programmed using purely geometric criteria. In this article, we demonstrate that the deformation of a generic degree-four vertex (4-vertex) origami cell is a combination of contracting, shearing, bending, and facet-binding. The last three deformation mechanisms are missing in the current rigid-origami metamaterial investigations, which focus mainly on conventional Miura-ori patterns. We show that these mechanisms provide the 4-vertex origami sheets and blocks with new deformation patterns as well as extraordinary kinematical and mechanical properties, including self-locking, tridirectional negative Poisson's ratios, flipping of stiffness profiles, and emerging shearing stiffness. This study reveals that the 4-vertex cells offer a better platform and greater design space for developing origami-based mechanical metamaterials than the conventional Miura-ori cell.

Uncovering the deformation mechanisms of origami metamaterials by introducing generic degree-four vertices

NASA Astrophysics Data System (ADS)

Fang, Hongbin; Li, Suyi; Ji, Huimin; Wang, K. W.

2016-10-01

Origami-based design holds promise for developing new mechanical metamaterials whose overall kinematic and mechanical properties can be programmed using purely geometric criteria. In this article, we demonstrate that the deformation of a generic degree-four vertex (4-vertex) origami cell is a combination of contracting, shearing, bending, and facet-binding. The last three deformation mechanisms are missing in the current rigid-origami metamaterial investigations, which focus mainly on conventional Miura-ori patterns. We show that these mechanisms provide the 4-vertex origami sheets and blocks with new deformation patterns as well as extraordinary kinematical and mechanical properties, including self-locking, tridirectional negative Poisson's ratios, flipping of stiffness profiles, and emerging shearing stiffness. This study reveals that the 4-vertex cells offer a better platform and greater design space for developing origami-based mechanical metamaterials than the conventional Miura-ori cell.

Investigating Different Patterns of Slab Deformation in the Lower Mantle

NASA Astrophysics Data System (ADS)

Zhang, J.; McNamara, A. K.

2017-12-01

The geometry of slabs within the upper mantle have been relatively well-imaged by tomography and regional seismic studies; however, the style of slab deformation in the lower mantle remains poorly understood. Although tomography models reveal that the lower mantle beneath paleo-subduction regions are faster-than-average, the resolution is not high enough to resolve how slabs are actually deforming there. Slabs have long been hypothesized as viscous, tabular sheets that subduct at the surface, descend through the mantle, and impinge on the core-mantle boundary (CMB). Geodynamical studies have shown a wide range of possible deformational behaviors, ranging from stiff, buckling slabs to more-ductile masses of accumulating slab material undergoing pure shear. Of particular interest is how rheology and 3D spherical geometry control the shape and deformational style of slabs as they descend deeper into the mantle. We performed high resolution 3D spherical calculations to explore slab deformation in deep mantle as a function of slab strength. In our model, kinematic velocity boundary conditions are imposed on the surface to simulate a moving plate which guides the formation of a subducting slab. In addition, a viscosity jump at the transition zone is applied. We find that although a slab subducts as a large tabular sheet from the surface, it doesn't always maintain such geometry. Instead, it typically breaks apart into a few smaller and narrower sheets which can even turn into cylindrical-shaped downwelling after subducting into deep mantle. Since seismic anisotropy is hypothesized to originate from crystal preferred orientation (CPO) in a slab when it impinges on the CMB and is predicted with significant help of time-dependent deformation information from the geodynamic models, our findings on lower mantle slab deformation patterns may enhance the understanding towards the cause of characteristic patterns of predicted seismic anisotropy.

Diverse Geological Applications For Basil: A 2d Finite-deformation Computational Algorithm

NASA Astrophysics Data System (ADS)

Houseman, Gregory A.; Barr, Terence D.; Evans, Lynn

Geological processes are often characterised by large finite-deformation continuum strains, on the order of 100% or greater. Microstructural processes cause deformation that may be represented by a viscous constitutive mechanism, with viscosity that may depend on temperature, pressure, or strain-rate. We have developed an effective com- putational algorithm for the evaluation of 2D deformation fields produced by Newto- nian or non-Newtonian viscous flow. With the implementation of this algorithm as a computer program, Basil, we have applied it to a range of diverse applications in Earth Sciences. Viscous flow fields in 2D may be defined for the thin-sheet case or, using a velocity-pressure formulation, for the plane-strain case. Flow fields are represented using 2D triangular elements with quadratic interpolation for velocity components and linear for pressure. The main matrix equation is solved by an efficient and compact conjugate gradient algorithm with iteration for non-Newtonian viscosity. Regular grids may be used, or grids based on a random distribution of points. Definition of the prob- lem requires that velocities, tractions, or some combination of the two, are specified on all external boundary nodes. Compliant boundaries may also be defined, based on the idea that traction is opposed to and proportional to boundary displacement rate. In- ternal boundary segments, allowing fault-like displacements within a viscous medium have also been developed, and we find that the computed displacement field around the fault tip is accurately represented for Newtonian and non-Newtonian viscosities, in spite of the stress singularity at the fault tip. Basil has been applied by us and colleagues to problems that include: thin sheet calculations of continental collision, Rayleigh-Taylor instability of the continental mantle lithosphere, deformation fields around fault terminations at the outcrop scale, stress and deformation fields in and around porphyroblasts, and deformation of the subducted oceanic slab. Application of Basil to a diverse range of topics is facilitated by the use of command syntax input files that allow most aspects of the calculation to be controlled easily, together with a post-processing package, Sybil, for display and interpretation of the results. Sybil uses a menu-driven graphical interface to access a powerful combination of commands, to- gether with log files that allow repetitive tasks to be more automated

Ultrasound Imaging of Muscle Contraction of the Tibialis Anterior in Patients with Facioscapulohumeral Dystrophy.

PubMed

Gijsbertse, Kaj; Goselink, Rianne; Lassche, Saskia; Nillesen, Maartje; Sprengers, André; Verdonschot, Nico; van Alfen, Nens; de Korte, Chris

2017-11-01

A need exists for biomarkers to diagnose, quantify and longitudinally follow facioscapulohumeral muscular dystrophy (FSHD) and many other neuromuscular disorders. Furthermore, the pathophysiological mechanisms leading to muscle weakness in most neuromuscular disorders are not completely understood. Dynamic ultrasound imaging (B-mode image sequences) in combination with speckle tracking is an easy, applicable and patient-friendly imaging tool to visualize and quantify muscle deformation. This dynamic information provides insight in the pathophysiological mechanisms and may help to distinguish the various stages of diseased muscle in FSHD. In this proof-of-principle study, we applied a speckle tracking technique to 2-D ultrasound image sequences to quantify the deformation of the tibialis anterior muscle in patients with FSHD and in healthy controls. The resulting deformation patterns were compared with muscle ultrasound echo intensity analysis (a measure of fat infiltration and dystrophy) and clinical outcome measures. Of the four FSHD patients, two patients had severe peroneal weakness and two patients had mild peroneal weakness on clinical examination. We found a markedly varied muscle deformation pattern between these groups: patients with severe peroneal weakness showed a different motion pattern of the tibialis anterior, with overall less displacement of the central tendon region, while healthy patients showed a non-uniform displacement pattern, with the central aponeurosis showing the largest displacement. Hence, dynamic muscle ultrasound of the tibialis anterior muscle in patients with FSHD revealed a distinctively different tissue deformation pattern among persons with and without tibialis anterior weakness. These findings could clarify the understanding of the pathophysiology of muscle weakness in FSHD patients. In addition, the change in muscle deformation shows good correlation with clinical measures and quantitative muscle ultrasound measurements. In conclusion, dynamic ultrasound in combination with speckle tracking allows the study of the effects of muscle pathology in relation to strength, force transmission and movement generation. Although further research is required, this technique can develop into a biomarker to quantify muscle disease severity. Copyright © 2017 World Federation for Ultrasound in Medicine & Biology. Published by Elsevier Inc. All rights reserved.

Response of explosive HMX to low-velocity impact: modeling by the crystal plasticity finite element method

NASA Astrophysics Data System (ADS)

Ilnitsky, Denis; Inogamov, Nail; Zhakhovsky, Vasily

2017-12-01

Crystal plasticity finite element method (CPFEM) is a powerful tool for modeling the various deformation problems, which takes into account the different plasticity mechanisms at microscale of grain sizes and contribution of anisotropic behavior of each grain to macroscopic deformation pattern. Using this method we simulated deformation and plasticity of high explosive HMX produced by relatively low velocity impact. It was found that such plastic deformations of grains cause local heating which is sufficient to induce chemical reactions.

Contrasting diversity patterns of soil mites and nematodes in secondary succession

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kardol, Paul; Newton, Jeffrey S.; Bezemer, T Martijn

2009-01-01

Soil biodiversity has been recognized as a key feature of ecosystem functioning and stability. However, soil biodiversity is strongly impaired by agriculture and relatively little is known on how and at what spatial and temporal scales soil biodiversity is restored after the human disturbances have come to an end. Here, a multi-scale approach was used to compare diversity patterns of soil mites and nematodes at four stages (early, mid, late, reference site) along a secondary succession chronosequence from abandoned arable land to heath land. In each field four soil samples were taken during four successive seasons. We determined soil diversitymore » within samples ({alpha}-diversity), between samples ({beta}-diversity) and within field sites ({gamma}-diversity). The patterns of {alpha}- and {gamma}-diversity developed similarly along the chronosequence for oribatid mites, but not for nematodes. Nematode {alpha}-diversity was highest in mid- and late-successional sites, while {gamma}-diversity was constant along the chronosequence. Oribatid mite {beta}-diversity was initially high, but decreased thereafter, whereas nematode {beta}-diversity increased when succession proceeded; indicating that patterns of within-site heterogeneity diverged for oribatid mites and nematodes. The spatio-temporal diversity patterns after land abandonment suggest that oribatid mite community development depends predominantly on colonization of new taxa, whereas nematode community development depends on shifts in dominance patterns. This would imply that at old fields diversity patterns of oribatid mites are mainly controlled by dispersal, whereas diversity patterns of nematodes are mainly controlled by changing abiotic or biotic soil conditions. Our study shows that the restoration of soil biodiversity along secondary successional gradients can be both scale- and phylum-dependent.« less

A metric for quantifying El Niño pattern diversity with implications for ENSO-mean state interaction

NASA Astrophysics Data System (ADS)

Lemmon, Danielle E.; Karnauskas, Kristopher B.

2018-04-01

Recent research on the El Niño-Southern Oscillation (ENSO) phenomenon increasingly reveals the highly complex and diverse nature of ENSO variability. A method of quantifying ENSO spatial pattern uniqueness and diversity is presented, which enables (1) formally distinguishing between unique and "canonical" El Niño events, (2) testing whether historical model simulations aptly capture ENSO diversity by comparing with instrumental observations, (3) projecting future ENSO diversity using future model simulations, (4) understanding the dynamics that give rise to ENSO diversity, and (5) analyzing the associated diversity of ENSO-related atmospheric teleconnection patterns. Here we develop a framework for measuring El Niño spatial SST pattern uniqueness and diversity for a given set of El Niño events using two indices, the El Niño Pattern Uniqueness (EPU) index and El Niño Pattern Diversity (EPD) index, respectively. By applying this framework to instrumental records, we independently confirm a recent regime shift in El Niño pattern diversity with an increase in unique El Niño event sea surface temperature patterns. However, the same regime shift is not observed in historical CMIP5 model simulations; moreover, a comparison between historical and future CMIP5 model scenarios shows no robust change in future ENSO diversity. Finally, we support recent work that asserts a link between the background cooling of the eastern tropical Pacific and changes in ENSO diversity. This robust link between an eastern Pacific cooling mode and ENSO diversity is observed not only in instrumental reconstructions and reanalysis, but also in historical and future CMIP5 model simulations.

Analysis of deformation patterns through advanced DINSAR techniques in Istanbul megacity

NASA Astrophysics Data System (ADS)

Balik Sanli, F.; Calò, F.; Abdikan, S.; Pepe, A.; Gorum, T.

2014-09-01

As result of the Turkey's economic growth and heavy migration processes from rural areas, Istanbul has experienced a high urbanization rate, with severe impacts on the environment in terms of natural resources pressure, land-cover changes and uncontrolled sprawl. As a consequence, the city became extremely vulnerable to natural and man-made hazards, inducing ground deformation phenomena that threaten buildings and infrastructures and often cause significant socio-economic losses. Therefore, the detection and monitoring of such deformation patterns is of primary importance for hazard and risk assessment as well as for the design and implementation of effective mitigation strategies. Aim of this work is to analyze the spatial distribution and temporal evolution of deformations affecting the Istanbul metropolitan area, by exploiting advanced Differential SAR Interferometry (DInSAR) techniques. In particular, we apply the Small BAseline Subset (SBAS) approach to a dataset of 43 TerraSAR-X images acquired, between November 2010 and June 2012, along descending orbits with an 11-day revisit time and a 3 m × 3 m spatial resolution. The SBAS processing allowed us to remotely detect and monitor subsidence patterns over all the urban area as well as to provide detailed information at the scale of the single building. Such SBAS measurements, effectively integrated with ground-based monitoring data and thematic maps, allows to explore the relationship between the detected deformation phenomena and urbanization, contributing to improve the urban planning and management.

Kinematics, Exhumation, and Sedimentation of the North Central Andes (Bolivia): An Integrated Thermochronometer and Thermokinematic Modeling Approach

NASA Astrophysics Data System (ADS)

Rak, Adam J.; McQuarrie, Nadine; Ehlers, Todd A.

2017-11-01

Quantifying mountain building processes in convergent orogens requires determination of the timing and rate of deformation in the overriding plate. In the central Andes, large discrepancies in both timing and rate of deformation prevent evaluating the shortening history in light of internal or external forcing factors. Geologic map patterns, age and location of reset thermochronometer systems, and synorogenic sediment distribution are all a function of the geometry, kinematics, and rate of deformation in a fold-thrust-belt-foreland basin (FTB-FB) system. To determine the timing and rate of deformation in the northern Bolivian Andes, we link thermokinematic modeling to a sequentially forward modeled, balanced cross section isostatically accounting for thrust loads and erosion. Displacement vectors, in 10 km increments, are assigned variable ages to create velocity fields in a thermokinematic model for predicting thermochronometer ages. We match both the pattern of predicted cooling ages with the across strike pattern of measured zircon fission track, apatite fission track, and apatite (U-Th)/He cooling ages as well as the modeled age of FB formations to published sedimentary sections. Results indicate that northern Bolivian FTB deformation started at 50 Ma and may have begun as early as 55 Ma. Acceptable rates of shortening permit either a constant rate of shortening ( 4-5 mm/yr) or varying shortening rates with faster rates (7-10 mm/yr) at 45-50 Ma and 12-8 Ma, significantly slower rates (2-4 mm/yr) from 35 to 15 Ma and indicate the northern Bolivian Subandes started deforming between 19 and 14 Ma.

Influence of Tectonics on the Channel Pattern of Alaknanda River in Srinagar Valley (Garhwal Himalaya)

NASA Astrophysics Data System (ADS)

Datt, Devi

2017-04-01

This paper describes the results of a continuing investigation of tectonic influence on channel pattern and morphology of Alaknanda River in Lesser Garhwal Himalaya, Uttarakhand, India. Extensive field investigations using conventional methods supported by topographical sheets and remote sensing data (LISS IV), were undertaken.The results are classified into three sections :- tectonics, channel pattern and impact of tectonics on channel pattern. The channel length is divided into 8 meanders sets of 3 segments from Supana to Kirtinagar. Thereafter, a litho-tectonic map of the Srinagar valley was prepared. The style of active tectonics on deformation and characterization of fluvial landscape was investigated on typical strike-slip transverse faults near the zone of North Almora Thrust (NAT). NAT is a major tectonic unit of the Lesser Himalaya which passes through the northern margin from NW to SE direction.. The structural and lithological controls on the Alaknanda River system in Srinagar valley are reflected on distinct drainage patterns, abrupt change in flow direction, incised meandering, offset river channels, straight river lines, palaeo-channels, multi levels of terraces, knick points and pools in longitudinal profile. The results of the study show that the sinuosity index of the river is 1.35. Transverse faulting is very common along the NAT. An earlier generation of linear tectonic features were displaced by the latter phase of deformation. Significant deviations were observed in river channel at deformation junctions. Moreover, all 8 sets of meanders are strongly influenced by tectonic features. The meandering course is, thereby, correlated with tectonic features. It is shown that the river channel is strongly influenced by the tectonic features in the study area. Key Words: Tectonic, Meander, Channel pattern, deformation, Knick point.

Is there a relationship between foetal position and both preferred lying posture after birth and pattern of subsequent postural deformity in non-ambulant people with cerebral palsy?

PubMed

Porter, D; Michael, S; Kirkwood, C

2010-09-01

A pattern of postural deformity was observed in a previous study that included an association between direction of spinal curvature and direction of windsweeping with more windswept deformities occurring to the right and lateral spinal curvatures occurring convex to the left. The direction of this pattern was found to be associated with preferred lying posture in early life. The aim of this study was to test the association between foetal position and both the preferred lying posture after birth, and the direction of subsequent postural deformity in non-ambulant children with cerebral palsy (CP). A retrospective cohort study was carried out involving 60 participants at level five on the gross motor function classification for CP. Foetal position during the last month of pregnancy was taken from antenatal records and parents were interviewed to identify preferred lying posture in the first year of life. At the time of the physical assessment ages ranged from 1 year and 1 month to 19 years with a median age of 13 years and 1 month. Foetal presentation was found to be associated with the preferred lying posture with participants carried in a left occipito-anterior/lateral position more likely to adopt a supine head right lying posture, and vice versa. An association was also observed between the foetal position and asymmetrical postural deformity occurring later in life with participants carried in a left occipito-anterior/lateral presentation more likely to have a convex left spinal curve, a lower left pelvic obliquity, and a windswept hip pattern to the right. Clinicians should be aware of the association between foetal presentation, asymmetrical lying posture, and the direction of subsequent postural deformity for severely disabled children. A hypothesis is described that might help to explain these findings.

Sequence Dependencies of DNA Deformability and Hydration in the Minor Groove

PubMed Central

Yonetani, Yoshiteru; Kono, Hidetoshi

2009-01-01

Abstract DNA deformability and hydration are both sequence-dependent and are essential in specific DNA sequence recognition by proteins. However, the relationship between the two is not well understood. Here, systematic molecular dynamics simulations of 136 DNA sequences that differ from each other in their central tetramer revealed that sequence dependence of hydration is clearly correlated with that of deformability. We show that this correlation can be illustrated by four typical cases. Most rigid basepair steps are highly likely to form an ordered hydration pattern composed of one water molecule forming a bridge between the bases of distinct strands, but a few exceptions favor another ordered hydration composed of two water molecules forming such a bridge. Steps with medium deformability can display both of these hydration patterns with frequent transition. Highly flexible steps do not have any stable hydration pattern. A detailed picture of this correlation demonstrates that motions of hydration water molecules and DNA bases are tightly coupled with each other at the atomic level. These results contribute to our understanding of the entropic contribution from water molecules in protein or drug binding and could be applied for the purpose of predicting binding sites. PMID:19686662

Earthquake-induced soft-sediment deformation structures in Late Pleistocene lacustrine deposits of Issyk-Kul lake (Kyrgyzstan)

NASA Astrophysics Data System (ADS)

Gladkov, A. S.; Lobova, E. U.; Deev, E. V.; Korzhenkov, A. M.; Mazeika, J. V.; Abdieva, S. V.; Rogozhin, E. A.; Rodkin, M. V.; Fortuna, A. B.; Charimov, T. A.; Yudakhin, A. S.

2016-10-01

This paper discusses the composition and distribution of soft-sediment deformation structures induced by liquefaction in Late Pleistocene lacustrine terrace deposits on the southern shore of Issyk-Kul Lake in the northern Tien Shan mountains of Kyrgyzstan. The section contains seven deformed beds grouped in two intervals. Five deformed beds in the upper interval contain load structures (load casts and flame structures), convolute lamination, ball-and-pillow structures, folds and slumps. Deformation patterns indicate that a seismic trigger generated a multiple slump on a gentle slope. The dating of overlying subaerial deposits suggests correlation between the deformation features and strong earthquakes in the Late Pleistocene.

Comparison of coseismic near-field and off-fault surface deformation patterns of the 1992 Mw 7.3 Landers and 1999 Mw 7.1 Hector Mine earthquakes: Implications for controls on the distribution of surface strain

NASA Astrophysics Data System (ADS)

Milliner, C. W. D.; Dolan, J. F.; Hollingsworth, J.; Leprince, S.; Ayoub, F.

2016-10-01

Subpixel correlation of preevent and postevent air photos reveal the complete near-field, horizontal surface deformation patterns of the 1992 Mw 7.3 Landers and 1999 Mw 7.1 Hector Mine ruptures. Total surface displacement values for both earthquakes are systematically larger than "on-fault" displacements from geologic field surveys, indicating significant distributed, inelastic deformation occurred along these ruptures. Comparison of these two data sets shows that 46 ± 10% and 39 ± 22% of the total surface deformation were distributed over fault zones averaging 154 m and 121 m in width for the Landers and Hector Mine events, respectively. Spatial variations of distributed deformation along both ruptures show correlations with the type of near-surface lithology and degree of fault complexity; larger amounts of distributed shear occur where the rupture propagated through loose unconsolidated sediments and areas of more complex fault structure. These results have basic implications for geologic-geodetic rate comparisons and probabilistic seismic hazard analysis.

A Case Study on the Strata Movement Mechanism and Surface Deformation Regulation in Chengchao Underground Iron Mine

NASA Astrophysics Data System (ADS)

Cheng, Guanwen; Chen, Congxin; Ma, Tianhui; Liu, Hongyuan; Tang, Chunan

2017-04-01

The regular pattern of surface deformation and the mechanism of underground strata movement, especially in iron mines constructed with the block caving method, have a great influence on infrastructure on the surface, so they are an important topic for research. Based on the engineering geology conditions and the surface deformation and fracture features in Chengchao Iron Mine, the mechanism of strata movement and the regular pattern of surface deformation in the footwall were studied by the geomechanical method, and the following conclusions can be drawn: I. The surface deformation process is divided into two stages over time, i.e., the chimney caving development stage and the post-chimney deformation stage. Currently, the surface deformation in Chengchao Iron Mine is at the post-chimney deformation stage. II. At the post-chimney deformation stage, the surface deformation and geological hazards in Chengchao Iron Mine are primarily controlled by the NWW-trending joints, with the phenomenon of toppling deformation and failure on the surface. Based on the surface deformation characteristics in Chengchao Iron Mine, the surface deformation area can be divided into the following four zones: the fracture extension zone, the fracture closure zone, the fracture formation zone and the deformation accumulation zone. The zones on the surface can be determined by the surface deformation characteristics. III. The cantilever beams near the chimney caving area, caused by the NWW-trending joints, have been subjected to toppling failure. This causes the different deformation and failure mechanisms in different locations of the deep rock mass. The deep rock can be divided into four zones, i.e., the fracture zone, fracture transition zone, deformation zone and undisturbed zone, according to the different deformation and failure mechanisms. The zones in the deep rock are the reason for the zones on the surface, so they can be determined by the zones on the surface. Through these findings, the degree of damage to the infrastructure in different locations can be determined based on the surface deformation zones. As the mining continues deeper, the development regulation of the zones on the surface and in deep rock mass can be further studied based on the zones in the deep rock.

Crystal preferred orientations of minerals from mantle xenoliths in alkali basaltic rocks form the Catalan Volcanic Zone (NE Spain)

NASA Astrophysics Data System (ADS)

Fernández-Roig, Mercè; Galán, Gumer; Mariani, Elisabetta

2015-04-01

Mantle xenoliths in alkali basaltic rocks from the Catalan Volcanic Zone, associated with the Neogene-Quaternary rift system in NE Spain, are formed of anhydrous spinel lherzolites and harzburgites with minor olivine websterites. Both peridotites are considered residues of variable degrees of partial melting, later affected by metasomatism, especially the harzburgites. These and the websterites display protogranular microstructures, whereas lherzolites show continuous variation between protogranular, porphyroclastic and equigranular forms. Thermometric data of new xenoliths indicate that protogranular harzburgites, lherzolites and websterites were equilibrated at higher temperatures than porphyroclastic and equigranular lherzolites. Mineral chemistry also indicates lower equilibrium pressure for porphyroclastic and equigranular lherzolites than for the protogranular ones. Crystal preferred orientations (CPOs) of olivine and pyroxenes from these new xenoliths were determined with the EBSD-SEM technique to identify the deformation stages affecting the lithospheric mantle in this zone and to assess the relationships between the deformation fabrics, processes and microstructures. Olivine CPOs in protogranular harzburgites, lherzolites and a pyroxenite display [010]-fiber patterns characterized by a strong point concentration of the [010] axis normal to the foliation and girdle distribution of [100] and [001] axes within the foliation plane. Olivine CPO symmetry in porphyroclastic and equigranular lherzolites varies continuously from [010]-fiber to orthorhombic and [100]-fiber types. The orthorhombic patterns are characterized by scattered maxima of the three axes, which are normal between them. The rare [100]-fiber patterns display strong point concentration of [100] axis, with normal girdle distribution of the other two axes, which are aligned with each other. The patterns of pyroxene CPOs are more dispersed than those of olivine, especially for clinopyroxene, but there is good correlation between the [100] olivine axis and the [001] pyroxene axis in most protogranular peridotites. However, the [001] axes of the three silicates are parallel in equigranular and some porphyroclastic lherzolites. CPOs and misorientation axes indicate deformation by dislocation creep accommodated mainly by the [100](010) slip system for olivine and the [001](100), [001](010) for orthopyroxene. Also, subsidiary slip systems for olivine are [100]{0kl}, [001](100), [100](001) in porphyroclastic and equigranular lherzolites. The fabric strength of the three main silicates are consistent, all of them decreasing with grain size reduction. These results indicate that the lithospheric mantle in this area was affected by several deformation stages that took place at decreasing temperature and pressure. An earlier stage is preserved in protogranular peridotites and a pyroxenite, with olivine [010]-fiber patterns and consistent deformation of pyroxenes. It could be related to axial shortening, transpression and/or subsequent recovery and annealing. Later deformation stages would be recorded by most porphyroclastic and equigranular lherzolites characterized by orthorhombic and [100]-fiber patterns for olivine, and transitions between them and with the [010]-fiber one. These samples would come most likely from an active shear zone at shallower upper mantle depth, where deformation at higher strain rates would explain the olivine [100]-fiber symmetry. Transient deformation patterns for olivine, grain size reduction along with weakening of the fabric strength could be due to dynamic recrystallization through grain boundary migration and subgrain rotation mechanisms.

Magma reservoir subsidence mechanics: Theoretical summary and application to Kilauea Volcano, Hawaii

NASA Astrophysics Data System (ADS)

Ryan, Michael P.; Blevins, James Y. K.; Okamura, Arnold T.; Koyanagi, Robert Y.

1983-05-01

An analytic model has been developed for the prediction of the three-dimensional deformation field generated by the withdrawal of magma from a sill-like storage compartment during an intrusion or eruption cycle. The model is based on the work of Berry and Sales (1961, 1962) and predicts the vertical displacement components over the areal plane. Model parameters are the depth of burial h, the intrusion half width a, the intrusion half length b, the thickness of the magmatic interior at the moment of melt withdrawal tm, and the planform aspect ratio ξ = a/b. The products of the model include areal deformation maps. Systematic variation in model parameters within the context of Kilauea Volcano, Hawaii, have revealed that circular and elliptical deformation patterns result from the collapse of draining rectilinear intrusions at depth. Moreover, the geometric parameters of a storage compartment may interact in complex ways to produce similar deformation patterns. The model has been applied to Kilauea Volcano for three periods of pronounced summit subsidence: (1) 1921-1927 (bracketing the steamblast eruptive phases of 1924); (2) June 1972 to December 1972, and (3) December 1972 to May 1973. Application of the model requires the simultaneous optimization of five predicted deformation features with respect to field measurements and the derivative deformation maps: (1) the vertical displacement maxima; (2) the vertical displacement gradients over the areal plane, (3) the lateral extent of the deformation field, (4) the aspect ratio of the subsidence pattern, and (5) the strike of the major axis of the deformation field. The constrained geometries and volumes of the inferred collapsed storage cavities for each period are (1) 1921-1927: depth ≅ 3 km, a ≅ 1500 m, b ≅ 4500 m, tm ≅ 20 m, V 540×106 m3, (2) June 1972 to December 1972: depth ≅ 3.3 km, a ≅ 600 m, b ≅ 2000 m, tm ≅ 1 m, V ≅ 4.8×106 m3, and (3) December 1972 to May 1973: depth ≅ 2.2 km, a ≅ 500 m, b ≅ 1612 m, tm ≅ 1 m, V ≅ 3.2×106 m3. For 2 and 3, calculated magmatic thicknesses tm happen to be in the range (3.48-0.15 m) of measurements for sill-like bodies in deeply dissected Hawaiian shield volcanoes. The fits obtained between calculated and observed deformation patterns allow quantification of the location, overall dimensions, orientation, and volume of the discrete, still molten, interior of sill-like compartments from which magma is tapped during eruption or intrusion.

Pair-Wise, Deformable Mirror, Image Plane-Based Diversity Electric Field Estimation for High Contrast Coronagraphy

NASA Technical Reports Server (NTRS)

Give'on, Amir; Kern, Brian D.; Shaklan, Stuart

2011-01-01

In this paper we describe the complex electric field reconstruction from image plane intensity measurements for high contrast coronagraphic imaging. A deformable mirror (DM) surface is modied with pairs of complementary shapes to create diversity in the image plane of the science camera where the intensity of the light is measured. Along with the Electric Field Conjugation correction algorithm, this estimation method has been used in various high contrast imaging testbeds to achieve the best contrasts to date both in narrow and in broad band light. We present the basic methodology of estimation in easy to follow list of steps, present results from HCIT and raise several open quations we are confronted with using this method.

Surface slip and off-fault deformation patterns in the 2013 MW 7.7 Balochistan, Pakistan earthquake: Implications for controls on the distribution of near-surface coseismic slip

NASA Astrophysics Data System (ADS)

Zinke, Robert; Hollingsworth, James; Dolan, James F.

2014-12-01

Comparison of 398 fault offsets measured by visual analysis of WorldView high-resolution satellite imagery with deformation maps produced by COSI-Corr subpixel image correlation of Landsat-8 and SPOT5 imagery reveals significant complexity and distributed deformation along the 2013 Mw 7.7 Balochistan, Pakistan earthquake. Average slip along the main trace of the fault was 4.2 m, with local maximum offsets up to 11.4 m. Comparison of slip measured from offset geomorphic features, which record localized slip along the main strand of the fault, to the total displacement across the entire width of the surface deformation zone from COSI-Corr reveals ˜45% off-fault deformation. While previous studies have shown that the structural maturity of the fault exerts a primary control on the total percentage of off-fault surface deformation, large along-strike variations in the percentage of strain localization observed in the 2013 rupture imply the influence of important secondary controls. One such possible secondary control is the type of near-surface material through which the rupture propagated. We therefore compared the percentage off-fault deformation to the type of material (bedrock, old alluvium, and young alluvium) at the surface and the distance of the fault to the nearest bedrock outcrop (a proxy for sediment thickness along this hybrid strike slip/reverse slip fault). We find significantly more off-fault deformation in younger and/or thicker sediments. Accounting for and predicting such off-fault deformation patterns has important implications for the interpretation of geologic slip rates, especially for their use in probabilistic seismic hazard assessments, the behavior of near-surface materials during coseismic deformation, and the future development of microzonation protocols for the built environment.

Perceptual transparency from image deformation.

PubMed

Kawabe, Takahiro; Maruya, Kazushi; Nishida, Shin'ya

2015-08-18

Human vision has a remarkable ability to perceive two layers at the same retinal locations, a transparent layer in front of a background surface. Critical image cues to perceptual transparency, studied extensively in the past, are changes in luminance or color that could be caused by light absorptions and reflections by the front layer, but such image changes may not be clearly visible when the front layer consists of a pure transparent material such as water. Our daily experiences with transparent materials of this kind suggest that an alternative potential cue of visual transparency is image deformations of a background pattern caused by light refraction. Although previous studies have indicated that these image deformations, at least static ones, play little role in perceptual transparency, here we show that dynamic image deformations of the background pattern, which could be produced by light refraction on a moving liquid's surface, can produce a vivid impression of a transparent liquid layer without the aid of any other visual cues as to the presence of a transparent layer. Furthermore, a transparent liquid layer perceptually emerges even from a randomly generated dynamic image deformation as long as it is similar to real liquid deformations in its spatiotemporal frequency profile. Our findings indicate that the brain can perceptually infer the presence of "invisible" transparent liquids by analyzing the spatiotemporal structure of dynamic image deformation, for which it uses a relatively simple computation that does not require high-level knowledge about the detailed physics of liquid deformation.

The structural hinge of a chain-foreland basin: Quaternary activity of the Pede-Apennine Thrust front (Northern Italy)

NASA Astrophysics Data System (ADS)

Maestrelli, Daniele; Benvenuti, Marco; Bonini, Marco; Carnicelli, Stefano; Piccardi, Luigi; Sani, Federico

2018-01-01

The Pede-Apennine margin (Northern Italy) is a major WNW-ESE-trending morpho-structural element that delimits the Po Plain to the southwest and consists of a system of southwest dipping thrusts, generally referred to as Pede-Apennine Thrust (PAT). The leading edge of the chain lies further north-east and is buried beneath the Plio-Quaternary marine and fluvial deposits of the Po Plain. Whereas the buried external thrust fronts are obvious active structures (as demonstrated by the 2012 Emilia earthquakes; e.g. Burrato et al., 2012), ongoing activity of the PAT is debated. Using a multidisciplinary approach that integrates structural, seismic, sedimentological and pedological field data, we describe the recent activity of the PAT structures in a sector of the Pede-Apennine margin between the Panaro and the Enza Rivers (Emilia-Romagna). We found that the PAT is emergent or sub-emergent and deforms Middle Pleistocene deposits. We also infer a more recent tectonic phase ( 60-80 ka) by Optically Stimulated Luminescence (OSL) dating of soil profiles that have been deformed by a recent reactivation of the PAT. Furthermore, we show evidence that the PAT and its external splay thrusts strongly influenced the drainage pattern, causing fluvial diversions and forcing paleo-rivers to develop roughly parallel to the margin. Finally, numerical Trishear modelling has been used to calculate deformation rates for the PAT along two transects. Extrapolated slip rates vary between 0.68 and 0.79 mm·yr- 1 for about the last 1.2-0.8 million years.

A latitudinal diversity gradient in terrestrial bacteria of the genus Streptomyces

DOE PAGES

Andam, Cheryl P.; Doroghazi, James R.; Campbell, Ashley N.; ...

2016-04-12

We show that Streptomyces biogeography in soils across North America is influenced by the regional diversification of microorganisms due to dispersal limitation and genetic drift. Streptomyces spp. form desiccation-resistant spores, which can be dispersed on the wind, allowing for a strong test of whether dispersal limitation governs patterns of terrestrial microbial diversity. We employed an approach that has high sensitivity for determining the effects of genetic drift. Specifically, we examined the genetic diversity and phylogeography of physiologically similar Streptomyces strains isolated from geographically distributed yet ecologically similar habitats. We found that Streptomyces beta diversity scales with geographic distance and bothmore » beta diversity and phylogenetic diversity manifest in a latitudinal diversity gradient. This pattern of Streptomyces biogeography resembles patterns seen for diverse species of plants and animals, and we therefore evaluated these data in the context of ecological and evolutionary hypotheses proposed to explain latitudinal diversity gradients. The data are consistent with the hypothesis that niche conservatism limits dispersal, and historical patterns of glaciation have limited the time for speciation in higher-latitude sites. Most notably, higher-latitude sites have lower phylogenetic diversity, higher phylogenetic clustering, and evidence of range expansion from lower latitudes. In addition, patterns of beta diversity partition with respect to the glacial history of sites. Furthermore, the data support the hypothesis that extant patterns of Streptomyces biogeography have been driven by historical patterns of glaciation and are the result of demographic range expansion, dispersal limitation, and regional diversification due to drift.« less

A Latitudinal Diversity Gradient in Terrestrial Bacteria of the Genus Streptomyces

PubMed Central

Andam, Cheryl P.; Doroghazi, James R.; Campbell, Ashley N.; Kelly, Peter J.; Choudoir, Mallory J.

2016-01-01

ABSTRACT We show that Streptomyces biogeography in soils across North America is influenced by the regional diversification of microorganisms due to dispersal limitation and genetic drift. Streptomyces spp. form desiccation-resistant spores, which can be dispersed on the wind, allowing for a strong test of whether dispersal limitation governs patterns of terrestrial microbial diversity. We employed an approach that has high sensitivity for determining the effects of genetic drift. Specifically, we examined the genetic diversity and phylogeography of physiologically similar Streptomyces strains isolated from geographically distributed yet ecologically similar habitats. We found that Streptomyces beta diversity scales with geographic distance and both beta diversity and phylogenetic diversity manifest in a latitudinal diversity gradient. This pattern of Streptomyces biogeography resembles patterns seen for diverse species of plants and animals, and we therefore evaluated these data in the context of ecological and evolutionary hypotheses proposed to explain latitudinal diversity gradients. The data are consistent with the hypothesis that niche conservatism limits dispersal, and historical patterns of glaciation have limited the time for speciation in higher-latitude sites. Most notably, higher-latitude sites have lower phylogenetic diversity, higher phylogenetic clustering, and evidence of range expansion from lower latitudes. In addition, patterns of beta diversity partition with respect to the glacial history of sites. Hence, the data support the hypothesis that extant patterns of Streptomyces biogeography have been driven by historical patterns of glaciation and are the result of demographic range expansion, dispersal limitation, and regional diversification due to drift. PMID:27073097

Pure shear and simple shear calcite textures. Comparison of experimental, theoretical and natural data

USGS Publications Warehouse

Wenk, H.-R.; Takeshita, T.; Bechler, E.; Erskine, B.G.; Matthies, S.

1987-01-01

The pattern of lattice preferred orientation (texture) in deformed rocks is an expression of the strain path and the acting deformation mechanisms. A first indication about the strain path is given by the symmetry of pole figures: coaxial deformation produces orthorhombic pole figures, while non-coaxial deformation yields monoclinic or triclinic pole figures. More quantitative information about the strain history can be obtained by comparing natural textures with experimental ones and with theoretical models. For this comparison, a representation in the sensitive three-dimensional orientation distribution space is extremely important and efforts are made to explain this concept. We have been investigating differences between pure shear and simple shear deformation incarbonate rocks and have found considerable agreement between textures produced in plane strain experiments and predictions based on the Taylor model. We were able to simulate the observed changes with strain history (coaxial vs non-coaxial) and the profound texture transition which occurs with increasing temperature. Two natural calcite textures were then selected which we interpreted by comparing them with the experimental and theoretical results. A marble from the Santa Rosa mylonite zone in southern California displays orthorhombic pole figures with patterns consistent with low temperature deformation in pure shear. A limestone from the Tanque Verde detachment fault in Arizona has a monoclinic fabric from which we can interpret that 60% of the deformation occurred by simple shear. ?? 1987.

The surface geometry of inherited joint and fracture trace patterns resulting from active and passive deformation

NASA Technical Reports Server (NTRS)

Podwysocki, M. H.; Gold, D. P.

1974-01-01

Hypothetical models are considered for detecting subsurface structure from the fracture or joint pattern, which may be influenced by the structure and propagated to the surface. Various patterns of an initially orthogonal fracture grid are modeled according to active and passive deformation mechanisms. In the active periclinal structure with a vertical axis, fracture frequency increased both over the dome and basin, and remained constant with decreasing depth to the structure. For passive periclinal features such as a reef or sand body, fracture frequency is determined by the arc of curvature and showed a reduction over the reefmound and increased over the basin.

Orientation Dependence of the Deformation Microstructure of Ta-4%W after Cold-Rolling

NASA Astrophysics Data System (ADS)

Zhang, J.; Ma, G. Q.; Godfrey, A.; Shu, D. Y.; Chen, Q.; Wu, G. L.

2017-07-01

One of the common features of deformed face-centered cubic metals with medium to high stacking fault energy is the formation of geometrically necessary dislocation boundaries. The dislocation boundary arrangements in refractory metals with body-centered cubic crystal structure are, however, less well known. To address this issue a Ta-4%W alloy was cold rolled up to 70% in thickness in the present work. The resulting deformation microstructures were characterized by electron back-scattering diffraction and the dislocation boundary arrangements in each grain were revealed using sample-frame misorientation axis maps calculated using an in-house code. The maps were used to analyze the slip pattern of individual grains after rolling, revealing an orientation dependence of the slip pattern.

Preliminary deformation model for National Seismic Hazard map of Indonesia

DOE Office of Scientific and Technical Information (OSTI.GOV)

Meilano, Irwan; Gunawan, Endra; Sarsito, Dina

Preliminary deformation model for the Indonesia’s National Seismic Hazard (NSH) map is constructed as the block rotation and strain accumulation function at the elastic half-space. Deformation due to rigid body motion is estimated by rotating six tectonic blocks in Indonesia. The interseismic deformation due to subduction is estimated by assuming coupling on subduction interface while deformation at active fault is calculated by assuming each of the fault‘s segment slips beneath a locking depth or in combination with creeping in a shallower part. This research shows that rigid body motion dominates the deformation pattern with magnitude more than 15 mm/year, except inmore » the narrow area near subduction zones and active faults where significant deformation reach to 25 mm/year.« less

Theory for plasticity of face-centered cubic metals.

PubMed

Jo, Minho; Koo, Yang Mo; Lee, Byeong-Joo; Johansson, Börje; Vitos, Levente; Kwon, Se Kyun

2014-05-06

The activation of plastic deformation mechanisms determines the mechanical behavior of crystalline materials. However, the complexity of plastic deformation and the lack of a unified theory of plasticity have seriously limited the exploration of the full capacity of metals. Current efforts to design high-strength structural materials in terms of stacking fault energy have not significantly reduced the laborious trial and error works on basic deformation properties. To remedy this situation, here we put forward a comprehensive and transparent theory for plastic deformation of face-centered cubic metals. This is based on a microscopic analysis that, without ambiguity, reveals the various deformation phenomena and elucidates the physical fundaments of the currently used phenomenological correlations. We identify an easily accessible single parameter derived from the intrinsic energy barriers, which fully specifies the potential diversity of metals. Based entirely on this parameter, a simple deformation mode diagram is shown to delineate a series of convenient design criteria, which clarifies a wide area of material functionality by texture control.

Theory for plasticity of face-centered cubic metals

PubMed Central

Jo, Minho; Koo, Yang Mo; Lee, Byeong-Joo; Johansson, Börje; Vitos, Levente; Kwon, Se Kyun

2014-01-01

The activation of plastic deformation mechanisms determines the mechanical behavior of crystalline materials. However, the complexity of plastic deformation and the lack of a unified theory of plasticity have seriously limited the exploration of the full capacity of metals. Current efforts to design high-strength structural materials in terms of stacking fault energy have not significantly reduced the laborious trial and error works on basic deformation properties. To remedy this situation, here we put forward a comprehensive and transparent theory for plastic deformation of face-centered cubic metals. This is based on a microscopic analysis that, without ambiguity, reveals the various deformation phenomena and elucidates the physical fundaments of the currently used phenomenological correlations. We identify an easily accessible single parameter derived from the intrinsic energy barriers, which fully specifies the potential diversity of metals. Based entirely on this parameter, a simple deformation mode diagram is shown to delineate a series of convenient design criteria, which clarifies a wide area of material functionality by texture control. PMID:24753563

Hardening mechanisms in olivine single crystal deformed at 1090 °C: an electron tomography study

NASA Astrophysics Data System (ADS)

Mussi, Alexandre; Cordier, Patrick; Demouchy, Sylvie; Hue, Benoit

2017-11-01

The dislocation microstructures in a single crystal of olivine deformed experimentally in uniaxial compression at 1090 °C and under a confining pressure of 300 MPa, have been investigated by transmission electron tomography in order to better understand deformation mechanisms at the microscale relevant for lithospheric mantle deformations. Investigation by electron tomography reveals microstructures, which are more complex than previously described, composed of ? and ? dislocations commonly exhibiting 3D configurations. Numerous mechanisms such as climb, cross-slip, double cross-slip as well as interactions like junction formations and collinear annihilations are the source of this complexity. The diversity observed advocates for microscale deformation of olivine significantly less simple than classic dislocation creep reported in metals or ice close to melting temperature. Deciphering mechanism of hardening in olivine at temperatures where ionic diffusion is slow and is then expected to play very little role is crucial to better understand and thus model deformation at larger scale and at temperatures (900-1100 °C) highly relevant for the lithospheric mantle.

Dielectric elastomer membranes undergoing inhomogeneous deformation

NASA Astrophysics Data System (ADS)

He, Tianhu; Zhao, Xuanhe; Suo, Zhigang

2009-10-01

Dielectric elastomers are capable of large deformation subject to an electric voltage and are promising for use as actuators, sensors, and generators. Because of large deformation, nonlinear equations of states, and diverse modes of failure, modeling the process of electromechanical transduction has been challenging. This paper studies a membrane of a dielectric elastomer deformed into an out-of-plane axisymmetric shape, a configuration used in a family of commercial devices known as the universal muscle actuators. The kinematics of deformation and charging, together with thermodynamics, leads to equations that govern the state of equilibrium. Numerical results indicate that the field in the membrane can be very inhomogeneous, and that the membrane is susceptible to several modes of failure, including electrical breakdown, loss of tension, and rupture by stretch. Care is needed in the design to balance the requirements of averting various modes of failure while using the material efficiently.

Uppermost Mantle Deformation and Hydration Beneath the Gorda Plate Inferred from Pn Travel-times

NASA Astrophysics Data System (ADS)

VanderBeek, B. P.; Toomey, D. R.

2017-12-01

Deformation of the uppermost oceanic mantle is thought to occur primarily in response to divergence beneath mid-ocean ridges with little subsequent deformation off-axis. A notable exception to this is the Gorda plate where sinuous magnetic anomalies and numerous intra-plate earthquakes indicate diffuse, plate-wide deformation. Thus, the Gorda region provides a natural laboratory to investigate the non-rigid behavior of tectonic plates. We invert Pn (the seismic head wave refracted below the Moho) arrival times from 770 local earthquakes for epicentral and mantle anisotropic velocity parameters to understand how the surficial pattern of deformation translates into the uppermost 10 km of the mantle. Specifically, we ask does the pattern of seismic anisotropy reflect spreading-induced fabrics or has it been re-worked by extensive deformation of the Gorda plate? If it has been re-worked, does it reflect pervasive faulting of the uppermost mantle or plate-scale ductile deformation? And, are isotropic velocities anomalously slow suggesting significant mantle hydration? Preliminary results show that the average mantle velocity beneath Gorda is 7.55 km/s. Velocities vary azimuthally by 4% and the fast-propagation direction is sub-parallel to Pacific absolute plate motion (APM). In comparison, the uppermost mantle beneath the Juan de Fuca (JdF) plate is characterized by 4.6% anisotropy with a mean velocity of 7.85 km/s [VanderBeek and Toomey, 2017]; the fast propagation direction trends between the paleo-spreading direction and JdF APM. The reduced Gorda velocities may indicate a greater extent of fault-controlled hydration of the shallow mantle compared to the JdF plate. In both regions, the anisotropic structure argues against the notion that shallow mantle deformation ceases away from the ridge. Instead, shearing across Gorda due to differential motion between the Pacific and JdF plates [e.g. Bodmer et al., 2015] may cause broad scale ductile deformation and the realignment of shallow mantle fabrics. Beneath the JdF plate, the anisotropic signal is inferred to track the evolution of mantle flow as it evolves from divergence at the ridge to simple shear that is more closely aligned with APM. We discuss the rheologic implications of these observations and the patterns of mantle flow and deformation in Cascadia.

Consumer preference for seeds and seedlings of rare species impacts tree diversity at multiple scales.

PubMed

Young, Hillary S; McCauley, Douglas J; Guevara, Roger; Dirzo, Rodolfo

2013-07-01

Positive density-dependent seed and seedling predation, where herbivores selectively eat seeds or seedlings of common species, is thought to play a major role in creating and maintaining plant community diversity. However, many herbivores and seed predators are known to exhibit preferences for rare foods, which could lead to negative density-dependent predation. In this study, we first demonstrate the occurrence of increased predation of locally rare tree species by a widespread group of insular seed and seedling predators, land crabs. We then build computer simulations based on these empirical data to examine the effects of such predation on diversity patterns. Simulations show that herbivore preferences for locally rare species are likely to drive scale-dependent effects on plant community diversity: at small scales these foraging patterns decrease plant community diversity via the selective consumption of rare plant species, while at the landscape level they should increase diversity, at least for short periods, by promoting clustered local dominance of a variety of species. Finally, we compared observed patterns of plant diversity at the site to those obtained via computer simulations, and found that diversity patterns generated under simulations were highly consistent with observed diversity patterns. We posit that preference for rare species by herbivores may be prevalent in low- or moderate-diversity systems, and that these effects may help explain diversity patterns across different spatial scales in such ecosystems.

Variable-intercept panel model for deformation zoning of a super-high arch dam.

PubMed

Shi, Zhongwen; Gu, Chongshi; Qin, Dong

2016-01-01

This study determines dam deformation similarity indexes based on an analysis of deformation zoning features and panel data clustering theory, with comprehensive consideration to the actual deformation law of super-high arch dams and the spatial-temporal features of dam deformation. Measurement methods of these indexes are studied. Based on the established deformation similarity criteria, the principle used to determine the number of dam deformation zones is constructed through entropy weight method. This study proposes the deformation zoning method for super-high arch dams and the implementation steps, analyzes the effect of special influencing factors of different dam zones on the deformation, introduces dummy variables that represent the special effect of dam deformation, and establishes a variable-intercept panel model for deformation zoning of super-high arch dams. Based on different patterns of the special effect in the variable-intercept panel model, two panel analysis models were established to monitor fixed and random effects of dam deformation. Hausman test method of model selection and model effectiveness assessment method are discussed. Finally, the effectiveness of established models is verified through a case study.

Present-day deformation across the Basin and Range Province, western United States

USGS Publications Warehouse

Thatcher, W.; Foulger, G.R.; Julian, B.R.; Svarc, J.; Quilty, E.; Bawden, G.W.

1999-01-01

The distribution of deformation within the Basin and Range province was determined from 1992, 1996, and 1998 surveys of a dense, 800-kilometer- aperture, Global Positioning System network, Internal deformation generally follows the pattern of Holocene fault distribution and is concentrated near the western extremity of the province, with lesser amounts focused near the eastern boundary. Little net deformation occurs across the central 500 kilometers of the network in western Utah and eastern Nevada. Concentration of deformation adjacent to the rigid Sierra Nevada block indicates that external plate-driving forces play an important role in driving deformation, modulating the extensional stress field generated by internal buoyancy forces that are due to lateral density gradients and topography near the province boundaries.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Andam, Cheryl P.; Doroghazi, James R.; Campbell, Ashley N.

We show that Streptomyces biogeography in soils across North America is influenced by the regional diversification of microorganisms due to dispersal limitation and genetic drift. Streptomyces spp. form desiccation-resistant spores, which can be dispersed on the wind, allowing for a strong test of whether dispersal limitation governs patterns of terrestrial microbial diversity. We employed an approach that has high sensitivity for determining the effects of genetic drift. Specifically, we examined the genetic diversity and phylogeography of physiologically similar Streptomyces strains isolated from geographically distributed yet ecologically similar habitats. We found that Streptomyces beta diversity scales with geographic distance and bothmore » beta diversity and phylogenetic diversity manifest in a latitudinal diversity gradient. This pattern of Streptomyces biogeography resembles patterns seen for diverse species of plants and animals, and we therefore evaluated these data in the context of ecological and evolutionary hypotheses proposed to explain latitudinal diversity gradients. The data are consistent with the hypothesis that niche conservatism limits dispersal, and historical patterns of glaciation have limited the time for speciation in higher-latitude sites. Most notably, higher-latitude sites have lower phylogenetic diversity, higher phylogenetic clustering, and evidence of range expansion from lower latitudes. In addition, patterns of beta diversity partition with respect to the glacial history of sites. Furthermore, the data support the hypothesis that extant patterns of Streptomyces biogeography have been driven by historical patterns of glaciation and are the result of demographic range expansion, dispersal limitation, and regional diversification due to drift.« less

Microbes on mountainsides: Contrasting elevational patterns of bacterial and plant diversity

PubMed Central

Bryant, Jessica A.; Lamanna, Christine; Morlon, Hélène; Kerkhoff, Andrew J.; Enquist, Brian J.; Green, Jessica L.

2008-01-01

The study of elevational diversity gradients dates back to the foundation of biogeography. Although elevational patterns of plant and animal diversity have been studied for centuries, such patterns have not been reported for microorganisms and remain poorly understood. Here, in an effort to assess the generality of elevational diversity patterns, we examined soil bacterial and plant diversity along an elevation gradient. To gain insight into the forces that structure these patterns, we adopted a multifaceted approach to incorporate information about the structure, diversity, and spatial turnover of montane communities in a phylogenetic context. We found that observed patterns of plant and bacterial diversity were fundamentally different. While bacterial taxon richness and phylogenetic diversity decreased monotonically from the lowest to highest elevations, plants followed a unimodal pattern, with a peak in richness and phylogenetic diversity at mid-elevations. At all elevations bacterial communities had a tendency to be phylogenetically clustered, containing closely related taxa. In contrast, plant communities did not exhibit a uniform phylogenetic structure across the gradient: they became more overdispersed with increasing elevation, containing distantly related taxa. Finally, a metric of phylogenetic beta-diversity showed that bacterial lineages were not randomly distributed, but rather exhibited significant spatial structure across the gradient, whereas plant lineages did not exhibit a significant phylogenetic signal. Quantifying the influence of sample scale in intertaxonomic comparisons remains a challenge. Nevertheless, our findings suggest that the forces structuring microorganism and macroorganism communities along elevational gradients differ. PMID:18695215

Lorentz symmetry violation and UHECR experiments

NASA Astrophysics Data System (ADS)

Gonzalez-Mestres, L.

2001-08-01

Lorentz symmetry violation (LSV) at Planck scale can be tested through ultra-high energy cosmic rays (UHECR). We discuss deformed Lorentz symmetry (DLS) and energy non-conservation (ENC) patterns where the effective LSV parameter varies like the square of the momentum scale (e.g. quadratically de-formed relativistic kinematics, QDRK). In such patterns, a ≈ 106 LSV at Planck scale would be enough to produce observable effects on the properties of cosmic rays at the ≈ 1020 eV scale: absence of GZK cutoff, stability of unstable particles, lower interaction rates, kinematical failure of any parton model and of standard formulae for Lorentz contraction and time dilation... Its phenomeno-logical implications are compatible with existing data. Precise signatures are discussed in several patterns. If the effective LSV or ENC parameter is taken to vary linearly with the momentum scale (e.g. linearly deformed relativistic kinematics, LDRK), contradictions seem to arise with UHECR data. Conse-quences are important for UHECR and high-energy gamma-ray exper iments, as well as for high-energy cosmic rays and gravitational waves.

Shape Transformations of Epithelial Shells

PubMed Central

Misra, Mahim; Audoly, Basile; Kevrekidis, Ioannis G.; Shvartsman, Stanislav Y.

2016-01-01

Regulated deformations of epithelial sheets are frequently foreshadowed by patterning of their mechanical properties. The connection between patterns of cell properties and the emerging tissue deformations is studied in multiple experimental systems, but the general principles remain poorly understood. For instance, it is in general unclear what determines the direction in which the patterned sheet is going to bend and whether the resulting shape transformation will be discontinuous or smooth. Here these questions are explored computationally, using vertex models of epithelial shells assembled from prismlike cells. In response to rings and patches of apical cell contractility, model epithelia smoothly deform into invaginated or evaginated shapes similar to those observed in embryos and tissue organoids. Most of the observed effects can be captured by a simpler model with polygonal cells, modified to include the effects of the apicobasal polarity and natural curvature of epithelia. Our models can be readily extended to include the effects of multiple constraints and used to describe a wide range of morphogenetic processes. PMID:27074691

Grayscale imbalance correction in real-time phase measuring profilometry

NASA Astrophysics Data System (ADS)

Zhu, Lin; Cao, Yiping; He, Dawu; Chen, Cheng

2016-10-01

Grayscale imbalance correction in real-time phase measuring profilometry (RPMP) is proposed. In the RPMP, the sufficient information is obtained to reconstruct the 3D shape of the measured object in one over twenty-four of a second. Only one color fringe pattern whose R, G and B channels are coded as three sinusoidal phase-shifting gratings with an equivalent shifting phase of 2π/3 is sent to a flash memory on a specialized digital light projector (SDLP). And then the SDLP projects the fringe patterns in R, G and B channels sequentially onto the measured object in one over seventy-two of a second and meanwhile a monochrome CCD camera captures the corresponding deformed patterns synchronously with the SDLP. Because the deformed patterns from three color channels are captured at different time, the color crosstalk is avoided completely. But due to the monochrome CCD camera's different spectral sensitivity to R, G and B tricolor, there will be grayscale imbalance among these deformed patterns captured at R, G and B channels respectively which may result in increasing measuring errors or even failing to reconstruct the 3D shape. So a new grayscale imbalance correction method based on least square method is developed. The experimental results verify the feasibility of the proposed method.

The Patterns and Drivers of Bacterial and Fungal β-Diversity in a Typical Dryland Ecosystem of Northwest China.

PubMed

Wang, Jianming; Zhang, Tianhan; Li, Liping; Li, Jingwen; Feng, Yiming; Lu, Qi

2017-01-01

Dryland ecosystems cover more than 30% of the terrestrial area of China, while processes that shape the biogeographic patterns of bacterial and fungal β-diversity have rarely been evaluated synchronously. To compare the biogeographic patterns and its drivers of bacterial and fungal β-diversity, we collected 62 soil samples from a typical dryland region of northwest China. We assessed bacterial and fungal communities by sequencing bacterial 16S rRNA gene and fungal ITS data. Meanwhile, the β-diversity was decomposed into two components: species replacement (species turnover) and nestedness to further explore the bacterial and fungal β-diversity patterns and its causes. The results show that both bacterial and fungal β-diversity were derived almost entirely from species turnover rather than from species nestedness. Distance-decay relationships confirmed that the geographic patterns of bacterial and fungal β-diversity were significantly different. Environmental factors had the dominant influence on both the bacterial and fungal β-diversity and species turnover, however, the role of geographic distance varied across bacterial and fungal communities. Furthermore, both bacterial and fungal nestedness did not significantly respond to the environmental and geographic distance. Our findings suggest that the different response of bacterial and fungal species turnover to dispersal limitation and other, unknown processes may result in different biogeographic patterns of bacterial and fungal β-diversity in the drylands of northwest China. Together, we highlight that the drivers of β-diversity patterns vary between bacterial and fungal communities, and microbial β-diversity are driven by multiple factors in the drylands of northwest China.

Patterns and controlling factors of species diversity in the Arctic Ocean

USGS Publications Warehouse

Yasuhara, Moriaki; Hunt, Gene; van Dijken, Gert; Arrigo, Kevin R.; Cronin, Thomas M.; Wollenburg, Jutta E.

2012-01-01

Aim  The Arctic Ocean is one of the last near-pristine regions on Earth, and, although human activities are expected to impact on Arctic ecosystems, we know very little about baseline patterns of Arctic Ocean biodiversity. This paper aims to describe Arctic Ocean-wide patterns of benthic biodiversity and to explore factors related to the large-scale species diversity patterns.Location  Arctic Ocean.Methods  We used large ostracode and foraminiferal datasets to describe the biodiversity patterns and applied comprehensive ecological modelling to test the degree to which these patterns are potentially governed by environmental factors, such as temperature, productivity, seasonality, ice cover and others. To test environmental control of the observed diversity patterns, subsets of samples for which all environmental parameters were available were analysed with multiple regression and model averaging.Results  Well-known negative latitudinal species diversity gradients (LSDGs) were found in metazoan Ostracoda, but the LSDGs were unimodal with an intermediate maximum with respect to latitude in protozoan foraminifera. Depth species diversity gradients were unimodal, with peaks in diversity shallower than those in other oceans. Our modelling results showed that several factors are significant predictors of diversity, but the significant predictors were different among shallow marine ostracodes, deep-sea ostracodes and deep-sea foraminifera.Main conclusions  On the basis of these Arctic Ocean-wide comprehensive datasets, we document large-scale diversity patterns with respect to latitude and depth. Our modelling results suggest that the underlying mechanisms causing these species diversity patterns are unexpectedly complex. The environmental parameters of temperature, surface productivity, seasonality of productivity, salinity and ice cover can all play a role in shaping large-scale diversity patterns, but their relative importance may depend on the ecological preferences of taxa and the oceanographic context of regions. These results suggest that a multiplicity of variables appear to be related to community structure in this system.

Finite Element Modeling of Passive Material Influence on the Deformation and Force Output of Skeletal Muscle

PubMed Central

Hodgson, John A.; Chi, Sheng-Wei; Yang, Judy P.; Chen, Jiun-Shyan; Edgerton, V. Reggie; Sinha, Shantanu

2014-01-01

The pattern of deformation of the different structural components of a muscle-tendon complex when it is activated provides important information about the internal mechanics of the muscle. Recent experimental observations of deformations in contracting muscle have presented inconsistencies with current widely held assumption about muscle behavior. These include negative strain in aponeuroses, non-uniform strain changes in sarcomeres, even of individual muscle fibers and evidence that muscle fiber cross sectional deformations are asymmetrical suggesting a need to readjust current models of contracting muscle. We report here our use of finite element modeling techniques to simulate a simple muscle-tendon complex and investigate the influence of passive intramuscular material properties upon the deformation patterns under isometric and shortening conditions. While phenomenological force-displacement relationships described the muscle fiber properties, the material properties of the passive matrix were varied to simulate a hydrostatic model, compliant and stiff isotropically hyperelastic models and an anisotropic elastic model. The numerical results demonstrate that passive elastic material properties significantly influence the magnitude, heterogeneity and distribution pattern of many measures of deformation in a contracting muscle. Measures included aponeurosis strain, aponeurosis separation, muscle fiber strain and fiber cross-sectional deformation. The force output of our simulations was strongly influenced by passive material properties, changing by as much as ~80% under some conditions. Maximum output was accomplished by introducing anisotropy along axes which were not strained significantly during a muscle length change, suggesting that correct costamere orientation may be a critical factor in optimal muscle function. Such a model not only fits known physiological data, but also maintains the relatively constant aponeurosis separation observed during in vivo muscle contractions and is easily extrapolated from our plane-strain conditions into a 3-dimensional structure. Such modeling approaches have the potential of explaining the reduction of force output consequent to changes in material properties of intramuscular materials arising in the diseased state such as in genetic disorders. PMID:22498294

Reactivation versus reworking of the active continental margin during the Zagros collision: Mahallat-Muteh-Laybid complexes, Sanandaj-Sirjan zone, Iran

NASA Astrophysics Data System (ADS)

Aflaki, Mahtab; Shabanian, Esmaeil; Davoodi, Zeinab; Mohajjel, Mohammad

2017-06-01

Reactivation of long-lived basement faults has significant influences on further deformation of collision zones. Three major inherited pre-collisional NW-, N- and NE-trending basement discontinuities have played important roles on the structural and tectono-sedimentary evolution of the Iranian micro-continent in the northeastern part of the Gondwana super-continent. Sanandaj-Sirjan zone (SSZ), known as the metamorphic belt of the Zagros orogeny, marks the SW margin of the Central Iran. SSZ is formed as a result of the Arabia-Eurasia collision and its general trend of deformation coincides with the NW structural trend of the collision. The NE-trending Mahallat, Muteh and Laybid complexes in the middle part of the NW-trending SSZ are the exception and have a trend almost normal to the NW-trending Zagros. A combined methodology of remote sensing, geometric and kinematics analyses complemented by field work was used to reconstruct the history of deformation in the Zagros hinterland since the earlier stages of collision to the present-day. Our results reveal the key role of the preexisting discontinuities of the Iranian basement in both the kinematics and structural pattern of the middle part of the SSZ. These basement faults have acted as main boundary conditions changing the collisional fabric perpendicular to its overall trend. Progressive deformation and the related changes during collision have caused drastic changes in the kinematics of the boundary faults. The establishment of dextral transtension in the SSZ has had secondary influences on the pattern of deformation by local clockwise rotation and localized dextral shear in the southern parts of the area of interest. This study highlights the significance of long-lived pre-existing structures in the deformation of collision zones. Such basement faults are capable to change both the pattern and kinematics of deformation of the adjacent areas involved in a continental collision.

Finite element modeling of passive material influence on the deformation and force output of skeletal muscle.

PubMed

Hodgson, John A; Chi, Sheng-Wei; Yang, Judy P; Chen, Jiun-Shyan; Edgerton, Victor R; Sinha, Shantanu

2012-05-01

The pattern of deformation of different structural components of a muscle-tendon complex when it is activated provides important information about the internal mechanics of the muscle. Recent experimental observations of deformations in contracting muscle have presented inconsistencies with current widely held assumption about muscle behavior. These include negative strain in aponeuroses, non-uniform strain changes in sarcomeres, even of individual muscle fibers and evidence that muscle fiber cross sectional deformations are asymmetrical suggesting a need to readjust current models of contracting muscle. We report here our use of finite element modeling techniques to simulate a simple muscle-tendon complex and investigate the influence of passive intramuscular material properties upon the deformation patterns under isometric and shortening conditions. While phenomenological force-displacement relationships described the muscle fiber properties, the material properties of the passive matrix were varied to simulate a hydrostatic model, compliant and stiff isotropically hyperelastic models and an anisotropic elastic model. The numerical results demonstrate that passive elastic material properties significantly influence the magnitude, heterogeneity and distribution pattern of many measures of deformation in a contracting muscle. Measures included aponeurosis strain, aponeurosis separation, muscle fiber strain and fiber cross-sectional deformation. The force output of our simulations was strongly influenced by passive material properties, changing by as much as ~80% under some conditions. The maximum output was accomplished by introducing anisotropy along axes which were not strained significantly during a muscle length change, suggesting that correct costamere orientation may be a critical factor in the optimal muscle function. Such a model not only fits known physiological data, but also maintains the relatively constant aponeurosis separation observed during in vivo muscle contractions and is easily extrapolated from our plane-strain conditions into a three-dimensional structure. Such modeling approaches have the potential of explaining the reduction of force output consequent to changes in material properties of intramuscular materials arising in the diseased state such as in genetic disorders. Copyright © 2012 Elsevier Ltd. All rights reserved.

Patterns of postural deformity in non-ambulant people with cerebral palsy: what is the relationship between the direction of scoliosis, direction of pelvic obliquity, direction of windswept hip deformity and side of hip dislocation?

PubMed

Porter, David; Michael, Shona; Kirkwood, Craig

2007-12-01

To investigate: (a) associations between the direction of scoliosis, direction of pelvic obliquity, direction of windswept deformity and side of hip subluxation/ dislocation in non-ambulant people with cerebral palsy; and (b) the lateral distribution of these postural asymmetries. Cross-sectional observational study. Posture management services in three centres in the UK. Non-ambulant people at level five on the gross motor function classification system for cerebral palsy. Direction of pelvic obliquity and lateral spinal curvature determined from physical examination, direction of windswept hip deformity derived from range of hip abduction/adduction, and presence/side of unilateral hip subluxation defined by hip migration percentage. A total of 747 participants were included in the study, aged 6-80 years (median 18 years 10 months). Associations between the direction of scoliosis and direction of pelvic obliquity, and between the direction of windswept hip deformity and side hip subluxation/dislocation were confirmed. A significant association was also seen between the direction of scoliosis and the direction of the windswept hip deformity (P<0.001) such that the convexity of the lateral spinal curve was more likely to be opposite to the direction of windsweeping. Furthermore, significantly more windswept deformities to the right (P=0.007), hips subluxed on the left (P=0.002) and lateral lumbar/lower thoracic spinal curves convex to the left (P=0.03) were observed. The individual asymmetrical postural deformities are not unrelated in terms of direction and not equally distributed to the left/right. A pattern of postural deformity was observed.

Patterns of postural deformity in non-ambulant people with cerebral palsy: what is the relationship between the direction of scoliosis, direction of pelvic obliquity, direction of windswept hip deformity and side of hip dislocation?

PubMed Central

Michael, Shona; Kirkwood, Craig

2008-01-01

Objective: To investigate: (a) associations between the direction of scoliosis, direction of pelvic obliquity, direction of windswept deformity and side of hip subluxation/dislocation in non-ambulant people with cerebral palsy; and (b) the lateral distribution of these postural asymmetries. Design: Cross-sectional observational study. Setting: Posture management services in three centres in the UK. Subjects: Non-ambulant people at level five on the gross motor function classification system for cerebral palsy. Main measures: Direction of pelvic obliquity and lateral spinal curvature determined from physical examination, direction of windswept hip deformity derived from range of hip abduction/adduction, and presence/side of unilateral hip subluxation defined by hip migration percentage. Results: A total of 747 participants were included in the study, aged 6–80 years (median 18 years 10 months). Associations between the direction of scoliosis and direction of pelvic obliquity, and between the direction of windswept hip deformity and side hip subluxation/dislocation were confirmed. A significant association was also seen between the direction of scoliosis and the direction of the windswept hip deformity (P < 0.001) such that the convexity of the lateral spinal curve was more likely to be opposite to the direction of windsweeping. Furthermore, significantly more windswept deformities to the right (P = 0.007), hips subluxed on the left (P = 0.002) and lateral lumbar/lower thoracic spinal curves convex to the left (P = 0.03) were observed. Conclusions: The individual asymmetrical postural deformities are not unrelated in terms of direction and not equally distributed to the left/right. A pattern of postural deformity was observed. PMID:18042604

Structural lineament and pattern analysis of Missouri, using LANDSAT imagery

NASA Technical Reports Server (NTRS)

Martin, J. A.; Kisvarsanyi, G. (Principal Investigator)

1977-01-01

The author has identified the following significant results. Major linear, circular, and arcuate traces were observed on LANDSAT imagery of Missouri. Lineaments plotted within the state boundaries range from 20 to nearly 500 km in length. Several extend into adjoining states. Lineaments plots indicate a distinct pattern and in general reflect structural features of the Precambrian basement of the platform. Coincidence of lineaments traced from the imagery and known structural features in Missouri is high, thus supporting a causative relation between them. The lineament pattern apparently reveals a fundamental style of the deformation of the intracontinental craton. Dozens of heretofore unknown linear features related to epirogenic movements and deformation of this segment of the continental crust were delineated. Lineaments and mineralization are interrelated in a geometrically classifiable pattern.

Adsorbate-induced lattice deformation in IRMOF-74 series

DOE PAGES

Jawahery, Sudi; Simon, Cory M.; Braun, Efrem; ...

2017-01-09

Here, IRMOF-74 analogues are among the most widely studied metal-organic frameworks (MOFs) for adsorption applications because of their one-dimensional channels and high metal density. Most studies involving the IRMOF-74 series assume that the crystal lattice is rigid. This assumption guides the interpretation of experimental data, as changes in the crystal symmetry have so far been ignored as a possibility in the literature. Here, we report a deformation pattern, induced by the adsorption of argon, for IRMOF-74-V. This work has two main implications. First, we use molecular simulations to demonstrate that the IRMOF-74 series undergoes a deformation that is similar tomore » the mechanism behind breathing MOFs, but is unique because the deformation pattern extends beyond a single unit cell of the original structure. Second, we provide an alternative interpretation of experimental small-angle X-ray scattering profiles of these systems, which changes how we view the fundamentals of adsorption in this MOF series.« less

Noninvasive, three-dimensional full-field body sensor for surface deformation monitoring of human body in vivo

NASA Astrophysics Data System (ADS)

Chen, Zhenning; Shao, Xinxing; He, Xiaoyuan; Wu, Jialin; Xu, Xiangyang; Zhang, Jinlin

2017-09-01

Noninvasive, three-dimensional (3-D), full-field surface deformation measurements of the human body are important for biomedical investigations. We proposed a 3-D noninvasive, full-field body sensor based on stereo digital image correlation (stereo-DIC) for surface deformation monitoring of the human body in vivo. First, by applying an improved water-transfer printing (WTP) technique to transfer optimized speckle patterns onto the skin, the body sensor was conveniently and harmlessly fabricated directly onto the human body. Then, stereo-DIC was used to achieve 3-D noncontact and noninvasive surface deformation measurements. The accuracy and efficiency of the proposed body sensor were verified and discussed by considering different complexions. Moreover, the fabrication of speckle patterns on human skin, which has always been considered a challenging problem, was shown to be feasible, effective, and harmless as a result of the improved WTP technique. An application of the proposed stereo-DIC-based body sensor was demonstrated by measuring the pulse wave velocity of human carotid artery.

Airplane wing deformation and flight flutter detection method by using three-dimensional speckle image correlation technology.

PubMed

Wu, Jun; Yu, Zhijing; Wang, Tao; Zhuge, Jingchang; Ji, Yue; Xue, Bin

2017-06-01

Airplane wing deformation is an important element of aerodynamic characteristics, structure design, and fatigue analysis for aircraft manufacturing, as well as a main test content of certification regarding flutter for airplanes. This paper presents a novel real-time detection method for wing deformation and flight flutter detection by using three-dimensional speckle image correlation technology. Speckle patterns whose positions are determined through the vibration characteristic of the aircraft are coated on the wing; then the speckle patterns are imaged by CCD cameras which are mounted inside the aircraft cabin. In order to reduce the computation, a matching technique based on Geodetic Systems Incorporated coded points combined with the classical epipolar constraint is proposed, and a displacement vector map for the aircraft wing can be obtained through comparing the coordinates of speckle points before and after deformation. Finally, verification experiments containing static and dynamic tests by using an aircraft wing model demonstrate the accuracy and effectiveness of the proposed method.

Adsorbate-induced lattice deformation in IRMOF-74 series

PubMed Central

Jawahery, Sudi; Simon, Cory M.; Braun, Efrem; Witman, Matthew; Tiana, Davide; Vlaisavljevich, Bess; Smit, Berend

2017-01-01

IRMOF-74 analogues are among the most widely studied metal-organic frameworks (MOFs) for adsorption applications because of their one-dimensional channels and high metal density. Most studies involving the IRMOF-74 series assume that the crystal lattice is rigid. This assumption guides the interpretation of experimental data, as changes in the crystal symmetry have so far been ignored as a possibility in the literature. Here, we report a deformation pattern, induced by the adsorption of argon, for IRMOF-74-V. This work has two main implications. First, we use molecular simulations to demonstrate that the IRMOF-74 series undergoes a deformation that is similar to the mechanism behind breathing MOFs, but is unique because the deformation pattern extends beyond a single unit cell of the original structure. Second, we provide an alternative interpretation of experimental small-angle X-ray scattering profiles of these systems, which changes how we view the fundamentals of adsorption in this MOF series. PMID:28067222

Adsorbate-induced lattice deformation in IRMOF-74 series

DOE Office of Scientific and Technical Information (OSTI.GOV)

Jawahery, Sudi; Simon, Cory M.; Braun, Efrem

Here, IRMOF-74 analogues are among the most widely studied metal-organic frameworks (MOFs) for adsorption applications because of their one-dimensional channels and high metal density. Most studies involving the IRMOF-74 series assume that the crystal lattice is rigid. This assumption guides the interpretation of experimental data, as changes in the crystal symmetry have so far been ignored as a possibility in the literature. Here, we report a deformation pattern, induced by the adsorption of argon, for IRMOF-74-V. This work has two main implications. First, we use molecular simulations to demonstrate that the IRMOF-74 series undergoes a deformation that is similar tomore » the mechanism behind breathing MOFs, but is unique because the deformation pattern extends beyond a single unit cell of the original structure. Second, we provide an alternative interpretation of experimental small-angle X-ray scattering profiles of these systems, which changes how we view the fundamentals of adsorption in this MOF series.« less

Recent crustal movements in the Sierra Nevada-Walker lane region of California-Nevada: Part i, rate and style of deformation

USGS Publications Warehouse

Slemmons, D.B.; Wormer, D.V.; Bell, E.J.; Silberman, M.L.

1979-01-01

This review of geological, seismological, geochronological and paleobotanical data is made to compare historic and geologic rates and styles of deformation of the Sierra Nevada and western Basin and Range Provinces. The main uplift of this region began about 17 m.y. ago, with slow uplift of the central Sierra Nevada summit region at rates estimated at about 0.012 mm/yr and of western Basin and Range Province at about 0.01 mm/yr. Many Mesozoic faults of the Foothills fault system were reactivated with normal slip in mid-Tertiary time and have continued to be active with slow slip rates. Sparse data indicate acceleration of rates of uplift and faulting during the Late Cenozoic. The Basin and Range faulting appears to have extended westward during this period with a reduction in width of the Sierra Nevada. The eastern boundary zone of the Sierra Nevada has an irregular en-echelon pattern of normal and right-oblique faults. The area between the Sierra Nevada and the Walker Lane is a complex zone of irregular patterns of ho??rst and graben blocks and conjugate normal-to right- and left-slip faults of NW and NE trend, respectively. The Walker Lane has at least five main strands near Walker Lake, with total right-slip separation estimated at 48 km. The NE-trending left-slip faults are much shorter than the Walker Lane fault zone and have maximum separations of no more than a few kilometers. Examples include the 1948 and 1966 fault zone northeast of Truckee, California, the Olinghouse fault (Part III) and possibly the almost 200-km-long Carson Lineament. Historic geologic evidence of faulting, seismologic evidence for focal mechanisms, geodetic measurements and strain measurements confirm continued regional uplift and tilting of the Sierra Nevada, with minor internal local faulting and deformation, smaller uplift of the western Basin and Range Province, conjugate focal mechanisms for faults of diverse orientations and types, and a NS to NE-SW compression axis (??1) and an EW to NW-SE extension axis (??3). ?? 1979.

Dislocation evolution in 316 L stainless steel during multiaxial ratchetting deformation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Dong Yawei; Kang Guozheng, E-mail: guozhengkang@yahoo.com.cn; Liu Yujie

2012-03-15

Dislocation patterns and their evolutions in 316 L stainless steel during the multiaxial ratchetting deformation were observed by transmission electron microscopy (TEM). The microscopic observations indicate that the dislocation evolution presented during the multiaxial ratchetting with four kinds of multiaxial loading paths is similar to that in the uniaxial case [G. Z. Kang et al., Mater Sci Eng A 527 (2010) 5952]. That is, dislocation networks and dislocation tangles are formed quickly by the multiple-slip and cross-slip of dislocation activated by applied multiaxial stress; and then polarized patterns such as dislocation walls and elongated incipient dislocation cells are formed atmore » the last stage of multiaxial ratchetting. The dislocation patterns evolve more quickly from the modes at low dislocation density to the ones at high density during the multiaxial ratchetting than that in the uniaxial case, and some traces of multiple-slip are observed in the multiaxial ones. The dislocation evolution during the multiaxial ratchetting deformation is summarized by comparing the observed dislocation patterns with those presented in the multiaxial strain-controlled and symmetrical stress-controlled cyclic tests. The multiaxial ratchetting of 316 L stainless steel can be microscopically and qualitatively explained by the observed evolution of dislocation patterns. - Highlights: Black-Right-Pointing-Pointer Dislocation patterns change from lines and nets to tangles, walls and cells. Black-Right-Pointing-Pointer Dislocation patterns evolve quicker in the multiaxial case. Black-Right-Pointing-Pointer Aligned dislocation arrays and some traces of multiple slips are observed. Black-Right-Pointing-Pointer Heterogeneous dislocation patterns result in the multiaxial ratchetting.« less

Infrastructure stability surveillance with high resolution InSAR

NASA Astrophysics Data System (ADS)

Balz, Timo; Düring, Ralf

2017-02-01

The construction of new infrastructure in largely unknown and difficult environments, as it is necessary for the construction of the New Silk Road, can lead to a decreased stability along the construction site, leading to an increase in landslide risk and deformation caused by surface motion. This generally requires a thorough pre-analysis and consecutive surveillance of the deformation patterns to ensure the stability and safety of the infrastructure projects. Interferometric SAR (InSAR) and the derived techniques of multi-baseline InSAR are very powerful tools for a large area observation of surface deformation patterns. With InSAR and deriver techniques, the topographic height and the surface motion can be estimated for large areas, making it an ideal tool for supporting the planning, construction, and safety surveillance of new infrastructure elements in remote areas.

Birefringence and incipient plastic deformation in elastically overdriven [100] CaF2 under shock compression

NASA Astrophysics Data System (ADS)

Li, Y.; Zhou, X. M.; Cai, Y.; Liu, C. L.; Luo, S. N.

2018-04-01

[100] CaF2 single crystals are shock-compressed via symmetric planar impact, and the flyer plate-target interface velocity histories are measured with a laser displacement interferometry. The shock loading is slightly above the Hugoniot elastic limit to investigate incipient plasticity and its kinetics, and its effects on optical properties and deformation inhomogeneity. Fringe patterns demonstrate different features in modulation of fringe amplitude, including birefringence and complicated modulations. The birefringence is attributed to local lattice rotation accompanying incipient plasticity. Spatially resolved measurements show inhomogeneity in deformation, birefringence, and fringe pattern evolutions, most likely caused by the inhomogeneity associated with lattice rotation and dislocation slip. Transiently overdriven elastic states are observed, and the incubation time for incipient plasticity decreases inversely with increasing overdrive by the elastic shock.

Chondron curvature mapping in growth plate cartilage under compressive loading.

PubMed

Vendra, Bhavya B; Roan, Esra; Williams, John L

2018-05-18

The physis, or growth plate, is a layer of cartilage responsible for long bone growth. It is organized into reserve, proliferative and hypertrophic zones. Unlike the reserve zone where chondrocytes are randomly arranged, either singly or in pairs, the proliferative and hypertrophic chondrocytes are arranged within tubular structures called chondrons. In previous studies, the strain patterns within the compressed growth plate have been reported to be nonuniform and inhomogeneous, with an apparent random pattern in compressive strains and a localized appearance of tensile strains. In this study we measured structural deformations along the entire lengths of chondrons when the physis was subjected to physiological (20%) and hyper-physiological (30% and 40%) levels of compression. This provided a means to interpret the apparent random strain patterns seen in texture correlation maps in terms of bending deformations of chondron structures and provided a physical explanation for the inhomogeneous and nonuniform strain patterns reported in previous studies. We observed relatively large bending deformations (kinking) of the chondron structures at the interface of the reserve and proliferative zones during compression. Bending in this region may induce dividing cells to align longitudinally to maintain column formation and drive longitudinal growth. Copyright © 2018 Elsevier Ltd. All rights reserved.

Optical image hiding based on chaotic vibration of deformable moiré grating

NASA Astrophysics Data System (ADS)

Lu, Guangqing; Saunoriene, Loreta; Aleksiene, Sandra; Ragulskis, Minvydas

2018-03-01

Image hiding technique based on chaotic vibration of deformable moiré grating is presented in this paper. The embedded secret digital image is leaked in a form of a pattern of time-averaged moiré fringes when the deformable cover grating vibrates according to a chaotic law of motion with a predefined set of parameters. Computational experiments are used to demonstrate the features and the applicability of the proposed scheme.

Floor-fractured crater models of the Sudbury structure, Canada

NASA Technical Reports Server (NTRS)

Wichman, R. W.; Schultz, P. H.

1992-01-01

The Sudbury structure in Ontario, Canada, is one of the oldest and largest impact structures recognized in the geological record. It is also one of the most extensively deformed and volcanically modified impact structures on Earth. Although few other terrestrial craters are recognized as volcanically modified, numerous impact craters on the Moon have been volcanically and tectonically modified and provide possible analogs for the observed pattern of modification at Sudbury. We correlate the pattern of early deformation at Sudbury to fracture patterns in two alternative lunar analogs and then use these analogs both to estimate the initial size of the Sudbury structure and to model the nature of early crater modification at Sudbury.

Perceiving environmental structure from optical motion

NASA Technical Reports Server (NTRS)

Lappin, Joseph S.

1991-01-01

Generally speaking, one of the most important sources of optical information about environmental structure is known to be the deforming optical patterns produced by the movements of the observer (pilot) or environmental objects. As an observer moves through a rigid environment, the projected optical patterns of environmental objects are systematically transformed according to their orientations and positions in 3D space relative to those of the observer. The detailed characteristics of these deforming optical patterns carry information about the 3D structure of the objects and about their locations and orientations relative to those of the observer. The specific geometrical properties of moving images that may constitute visually detected information about the shapes and locations of environmental objects is examined.

A phenological mid-domain effect in flowering diversity.

PubMed

Morales, Manuel A; Dodge, Gary J; Inouye, David W

2005-01-01

In this paper, we test the mid-domain hypothesis as an explanation for observed patterns of flowering diversity in two sub-alpine communities of insect-pollinated plants. Observed species richness patterns showed an early-season increase in richness, a mid-season peak, and a late-season decrease. We show that a "mid-domain" null model can qualitatively match this pattern of flowering species richness, with R(2) values typically greater than 60%. We find significant or marginally significant departures from expected patterns of diversity for only 3 out of 12 year-site combinations. On the other hand, we do find a consistent pattern of departure when comparing observed versus null-model predicted flowering diversity averaged across years. Our results therefore support the hypothesis that ecological factors shape patterns of flowering phenology, but that the strength or nature of these environmental forcings may differ between years or the two habitats we studied, or may depend on species-specific characteristics of these plant communities. We conclude that mid-domain null models provide an important baseline from which to test departure of expected patterns of flowering diversity across temporal domains. Geometric constraints should be included first in the list of factors that drive seasonal patterns of flowering diversity.

Constraints on geothermal reservoir volume change calculations from InSAR surface displacements and injection and production data

NASA Astrophysics Data System (ADS)

Kaven, J. Ole; Barbour, Andrew J.; Ali, Tabrez

2017-04-01

Continual production of geothermal energy at times leads to significant surface displacement that can be observed in high spatial resolution using InSAR imagery. The surface displacement can be analyzed to resolve volume change within the reservoir revealing the often-complicated patterns of reservoir deformation. Simple point source models of reservoir deformation in a homogeneous elastic or poro-elastic medium can be superimposed to provide spatially varying, kinematic representations of reservoir deformation. In many cases, injection and production data are known in insufficient detail; but, when these are available, the same Green functions can be used to constrain the reservoir deformation. Here we outline how the injection and production data can be used to constrain bounds on the solution by posing the inversion as a quadratic programming with inequality constraints and regularization rather than a conventional least squares solution with regularization. We apply this method to InSAR-derived surface displacements at the Coso and Salton Sea Geothermal Fields in California, using publically available injection and production data. At both geothermal fields the available surface deformation in conjunction with the injection and production data permit robust solutions for the spatially varying reservoir deformation. The reservoir deformation pattern resulting from the constrained quadratic programming solution is more heterogeneous when compared to a conventional least squares solution. The increased heterogeneity is consistent with the known structural controls on heat and fluid transport in each geothermal reservoir.

Global patterns of predator diversity in the open oceans.

PubMed

Worm, Boris; Sandow, Marcel; Oschlies, Andreas; Lotze, Heike K; Myers, Ransom A

2005-08-26

The open oceans comprise most of the biosphere, yet patterns and trends of species diversity there are enigmatic. Here, we derive worldwide patterns of tuna and billfish diversity over the past 50 years, revealing distinct subtropical "hotspots" that appeared to hold generally for other predators and zooplankton. Diversity was positively correlated with thermal fronts and dissolved oxygen and a nonlinear function of temperature (approximately 25 degrees C optimum). Diversity declined between 10 and 50% in all oceans, a trend that coincided with increased fishing pressure, superimposed on strong El Niño-Southern Oscillation-driven variability across the Pacific. We conclude that predator diversity shows a predictable yet eroding pattern signaling ecosystem-wide changes linked to climate and fishing.

Beyond Serial Founder Effects: The Impact of Admixture and Localized Gene Flow on Patterns of Regional Genetic Diversity.

PubMed

Hunley, Keith L; Cabana, Graciela S

2016-07-01

Geneticists have argued that the linear decay in within-population genetic diversity with increasing geographic distance from East Africa is best explained by a phylogenetic process of repeated founder effects, growth, and isolation. However, this serial founder effect (SFE) process has not yet been adequately vetted against other evolutionary processes that may also affect geospatial patterns of diversity. Additionally, studies of the SFE process have been largely based on a limited 52-population sample. Here, we assess the effects of founder effect, admixture, and localized gene flow processes on patterns of global and regional diversity using a published data set of 645 autosomal microsatellite genotypes from 5,415 individuals in 248 widespread populations. We used a formal tree-fitting approach to explore the role of founder effects. The approach involved fitting global and regional population trees to extant patterns of gene diversity and then systematically examining the deviations in fit. We also informally tested the SFE process using linear models of gene diversity versus waypoint geographic distances from Africa. We tested the role of localized gene flow using partial Mantel correlograms of gene diversity versus geographic distance controlling for the confounding effects of treelike genetic structure. We corroborate previous findings that global patterns of diversity, both within and between populations, are the product of an out-of-Africa SFE process. Within regions, however, diversity within populations is uncorrelated with geographic distance from Africa. Here, patterns of diversity have been largely shaped by recent interregional admixture and secondary range expansions. Our detailed analyses of the pattern of diversity within and between populations reveal that the signatures of different evolutionary processes dominate at different geographic scales. These findings have important implications for recent publications on the biology of race.

Transformations of the dislocation structure of nickel single crystals

NASA Astrophysics Data System (ADS)

Alfyorova, E. A.; Lychagin, D. V.; Lychagina, L. L.; Tsvetkov, N. A.

2017-12-01

A relationship between different-scale deformations of crystals has not been established yet. In order to solve this task, we investigate the development of a deformation relief and dislocation structure in nickel single crystals after deformation. The stress tensor, crystallography, and geometry of specimens affect the organization of some shear along corresponding systems of sliding. The organization of shear shows some features of self-organization. It is associated with the self-organization in the dislocation subsystem analyzed previously. The effectiveness of reducing external and internal stresses determines patterns of deformation processes at different scale levels.

Different Phases of Earthquake Cycle Reflected in GPS Measured Crustal Deformations along the Andes

NASA Astrophysics Data System (ADS)

Khazaradze, G.; Klotz, J.

2001-12-01

The South American Geodynamic Activities (SAGA) project was initiated in 1993 by the GeoForschungsZentrum together with host organizations in Argentina and Chile with the main objective of studying the kinematics and dynamics of present-day deformation processes along the central and southern Andes. Currently the SAGA network consists of 230 geodetic markers spanning more than 2000 km long distance from Peru/Chile border in the north to Cape Horn in the south. The majority of the observed crustal deformation field is relatively homogenous: roughly parallel to the plate convergence direction and decreasing in magnitude away from the deformation front. This pattern is characteristic for the \\textit{inter-seismic} phase of earthquake deformation cycle and can be explained by the elastic strain accumulation due to locking of the thrust interface between the subducting Nazca and the overriding South America plates. However, in addition to the dominant inter-seismic signal, close examination of the observed velocity field also reveals significant spatial and temporal variations, contrary to the commonly used assumption of constant deformation rates. This variation is especially pronounced for the measurements in the vicinity of the 1995 Mw8.0 Antofagasta earthquake (22{° }S-26{° }S). Here, after capturing up to 1 meters of \\textit{co-seismic} displacements associated with this event, the analysis of data obtained during the three following field campaigns (1996-1999), reveals highly time dependent deformation pattern. This can be explained by the decreasing importance of \\textit{post-seismic} effects of the Antofagasta event relative to the increasing dominance of the inter-seismic phase of subduction. Perhaps, even more interesting time dependent observations have been detected in the southern part the SAGA network (38{° }S-43{° }S).Here, after 35 years of the occurrence of the 1960 Mw9.5 Chile earthquake, we still see the continuing post-seismic effects of this largest ever recorded earthquake on the earth. To properly interpret given observations, we developed the fully \\textsc{3D} Andean Elastic Dislocation Model (AEDM), which is used to explain the dominant inter-seismic signal. The subtraction of the AEDM predicted deformation rates from the observations leads towards the "filtered" residual velocity field, that can be used to highlight, for example, the post-seismic deformation effects. Also, in the central section of the SAGA network, the residual velocity field indicates the existence of more long-term (i.e. geologic) deformations. In summary, the changing spatial-temporal pattern of GPS measured crustal deformation rates along the central and southern Andes is governed by the relative importance of different phases of earthquake deformation cycle.

Independently Controlled Wing Stroke Patterns in the Fruit Fly Drosophila melanogaster

PubMed Central

Chakraborty, Soma; Bartussek, Jan; Fry, Steven N.; Zapotocky, Martin

2015-01-01

Flies achieve supreme flight maneuverability through a small set of miniscule steering muscles attached to the wing base. The fast flight maneuvers arise from precisely timed activation of the steering muscles and the resulting subtle modulation of the wing stroke. In addition, slower modulation of wing kinematics arises from changes in the activity of indirect flight muscles in the thorax. We investigated if these modulations can be described as a superposition of a limited number of elementary deformations of the wing stroke that are under independent physiological control. Using a high-speed computer vision system, we recorded the wing motion of tethered flying fruit flies for up to 12 000 consecutive wing strokes at a sampling rate of 6250 Hz. We then decomposed the joint motion pattern of both wings into components that had the minimal mutual information (a measure of statistical dependence). In 100 flight segments measured from 10 individual flies, we identified 7 distinct types of frequently occurring least-dependent components, each defining a kinematic pattern (a specific deformation of the wing stroke and the sequence of its activation from cycle to cycle). Two of these stroke deformations can be associated with the control of yaw torque and total flight force, respectively. A third deformation involves a change in the downstroke-to-upstroke duration ratio, which is expected to alter the pitch torque. A fourth kinematic pattern consists in the alteration of stroke amplitude with a period of 2 wingbeat cycles, extending for dozens of cycles. Our analysis indicates that these four elementary kinematic patterns can be activated mutually independently, and occur both in isolation and in linear superposition. The results strengthen the available evidence for independent control of yaw torque, pitch torque, and total flight force. Our computational method facilitates systematic identification of novel patterns in large kinematic datasets. PMID:25710715

Independently controlled wing stroke patterns in the fruit fly Drosophila melanogaster.

PubMed

Chakraborty, Soma; Bartussek, Jan; Fry, Steven N; Zapotocky, Martin

2015-01-01

Flies achieve supreme flight maneuverability through a small set of miniscule steering muscles attached to the wing base. The fast flight maneuvers arise from precisely timed activation of the steering muscles and the resulting subtle modulation of the wing stroke. In addition, slower modulation of wing kinematics arises from changes in the activity of indirect flight muscles in the thorax. We investigated if these modulations can be described as a superposition of a limited number of elementary deformations of the wing stroke that are under independent physiological control. Using a high-speed computer vision system, we recorded the wing motion of tethered flying fruit flies for up to 12,000 consecutive wing strokes at a sampling rate of 6250 Hz. We then decomposed the joint motion pattern of both wings into components that had the minimal mutual information (a measure of statistical dependence). In 100 flight segments measured from 10 individual flies, we identified 7 distinct types of frequently occurring least-dependent components, each defining a kinematic pattern (a specific deformation of the wing stroke and the sequence of its activation from cycle to cycle). Two of these stroke deformations can be associated with the control of yaw torque and total flight force, respectively. A third deformation involves a change in the downstroke-to-upstroke duration ratio, which is expected to alter the pitch torque. A fourth kinematic pattern consists in the alteration of stroke amplitude with a period of 2 wingbeat cycles, extending for dozens of cycles. Our analysis indicates that these four elementary kinematic patterns can be activated mutually independently, and occur both in isolation and in linear superposition. The results strengthen the available evidence for independent control of yaw torque, pitch torque, and total flight force. Our computational method facilitates systematic identification of novel patterns in large kinematic datasets.

The Remote Detection of Incipient Catastrophic Failure in Large Landslides

NASA Astrophysics Data System (ADS)

Petley, D.; Bulmer, M. H.; Murphy, W.; Mantovani, F.

2001-12-01

Landslide movement is commonly associated with brittle failure and ductile deformation. Kilburn and Petley (2001) proposed that cracking in landslides occurs due to downslope stress acting on the deforming horizon. If the assumption that a given crack event breaks a fixed distance of unbroken rock or soil the rate of cracking becomes equivalent to the number of crack events per unit time. Where crack growth (not nucleation) is occurring, the inverse rate of displacement changes linearly with time. Failure can be assumed to be the time at which displacement rates become infinitely large. Thus, for a slope heading towards catastrophic failure due to the development of a failure plane, this relationship would be linear, with the point at which failure will occur being the time when the line intercepts the x-axis. Increasing rates of deformation associated with ductile processes of crack nucleation would yield a curve with a negative gradient asymptopic to the x-axis. This hypothesis is being examined. In the 1960 movement of the Vaiont slide, Italy, although the rate of movement was accelerating, the plot of 1/deformation against time shows that it was increasing towards a steady state deformation. This movement has been associated with a low accumulated strain ductile phase of movement. In the 1963 movement event, the trend is linear. This was associated with a brittle phase of movement. A plot of 1/deformation against time for movement of the debris flow portion of the Tessina landslide (1998) shows a curve with a negative gradient asymptopic to the x-axis. This indicates that the debris flow moved as a result of ductile deformation processes. Plots of movement data for the Black Ven landslide over 1999 and 2001 also show curves that correlate with known deformation and catastrophic phases. The model results suggest there is a definable deformation pattern that is diagnostic of landslides approaching catastrophic failure. This pattern can be differentiated from landslides that are undergoing ductile deformation and those that are suffering crack nucleation.

A Systematic Review of Global Drivers of Ant Elevational Diversity

PubMed Central

Szewczyk, Tim; McCain, Christy M.

2016-01-01

Ant diversity shows a variety of patterns across elevational gradients, though the patterns and drivers have not been evaluated comprehensively. In this systematic review and reanalysis, we use published data on ant elevational diversity to detail the observed patterns and to test the predictions and interactions of four major diversity hypotheses: thermal energy, the mid-domain effect, area, and the elevational climate model. Of sixty-seven published datasets from the literature, only those with standardized, comprehensive sampling were used. Datasets included both local and regional ant diversity and spanned 80° in latitude across six biogeographical provinces. We used a combination of simulations, linear regressions, and non-parametric statistics to test multiple quantitative predictions of each hypothesis. We used an environmentally and geometrically constrained model as well as multiple regression to test their interactions. Ant diversity showed three distinct patterns across elevations: most common were hump-shaped mid-elevation peaks in diversity, followed by low-elevation plateaus and monotonic decreases in the number of ant species. The elevational climate model, which proposes that temperature and precipitation jointly drive diversity, and area were partially supported as independent drivers. Thermal energy and the mid-domain effect were not supported as primary drivers of ant diversity globally. The interaction models supported the influence of multiple drivers, though not a consistent set. In contrast to many vertebrate taxa, global ant elevational diversity patterns appear more complex, with the best environmental model contingent on precipitation levels. Differences in ecology and natural history among taxa may be crucial to the processes influencing broad-scale diversity patterns. PMID:27175999

Tectonic evolution of the Arizaro basin of the Puna plateau, NW Argentina: Implications for plateau-scale processes

NASA Astrophysics Data System (ADS)

Boyd, John D.

Sedimentary basins of the Altiplano-Puna Plateau within the Andean Plateau in South America contain the record of retro-arc foreland basin evolution during the Cenozoic. The deformation of these basins is characterized by high angle reverse faults and thrusts deforming crystalline basement and sedimentary covers. The mechanism/s responsible for deformation within the region are not fully understood in detail. The relative abundance of intercalated tuffs within these basins and those within the bounding Eastern Cordillera enables the spatial-temporal pattern of deformation across the orogen to be constrained. This study uses the systematic combination of structural, geochronologic and sedimentalogical techniques applied to Cenozoic sedimentary rocks within the Arizaro Basin to investigate the timing of deformation across within the region in order to test two end member models for basin deformation in response to lithospheric processes. The first model attributes the deformation of the basins to internal deformation within an orogenic wedge as part of the taper building process required prior to propagation eastward towards the foreland basin system. The second model attributes basin deformation to isostatic adjustments resulting from small-scale lithospheric foundering. Detailed geologic mapping of the Arizaro Basin reveals a complex interplay of coeval thick-skinned and thin-skinned deformation, which deforms the thick Miocene succession of fluvial-lacustrine strata in both a brittle and ductile manner. Zircon U-Pb analyses of intercalated tuffs from the Vizcachera Formation reveal that approximately three km of the section was deposited between the Early Miocene (ca. 18.3) and the Middle Miocene (ca. 13.9). One tuff in the uppermost Vizcachera Formation constrains the lower limit of timing of deformation for the Arizaro Basin to be 13.9 +/- 0.7 Ma. When combined with published geochronological data across the Puna Plateau and Eastern Cordillera, the new data presented in this study constrains timing of deformation within the basin and the greater Arizaro area to the Middle Miocene. This study also indicates that the spatial-temporal patterns of deformation are likely the result of a combination of both models mentioned above with critical taper theory dominating early deformation associated with basin formation and small-scale lithospheric foundering dominating the later deformation in the Middle Miocene. Deformation at the wedge tip continues in the Eastern Cordillera seemingly without interruption, suggesting that the effects of the isostatic pull-down associated with small-scale lithospheric foundering is localized and does not significantly affect the taper of the orogenic wedge as a whole. Thus, allowing the normal cycle of orogenic wedge propagation to occur, uninhibited.

Biogeographical Interpretation of Elevational Patterns of Genus Diversity of Seed Plants in Nepal

PubMed Central

Li, Miao; Feng, Jianmeng

2015-01-01

This study tests if the biogeographical affinities of genera are relevant for explaining elevational plant diversity patterns in Nepal. We used simultaneous autoregressive (SAR) models to investigate the explanatory power of several predictors in explaining the diversity-elevation relationships shown in genera with different biogeographical affinities. Delta akaike information criterion (ΔAIC) was used for multi-model inferences and selections. Our results showed that both the total and tropical genus diversity peaked below the mid-point of the elevational gradient, whereas that of temperate genera had a nearly symmetrical, unimodal relationship with elevation. The proportion of temperate genera increased markedly with elevation, while that of tropical genera declined. Compared to tropical genera, temperate genera had wider elevational ranges and were observed at higher elevations. Water-related variables, rather than mid-domain effects (MDE), were the most significant predictors of elevational patterns of tropical genus diversity. The temperate genus diversity was influenced by energy availability, but only in quadratic terms of the models. Though climatic factors and mid-domain effects jointly explained most of the variation in the diversity of temperate genera with elevation, the former played stronger roles. Total genus diversity was most strongly influenced by climate and the floristic overlap of tropical and temperate floras, while the influences of mid-domain effects were relatively weak. The influences of water-related and energy-related variables may vary with biogeographical affinities. The elevational patterns may be most closely related to climatic factors, while MDE may somewhat modify the patterns. Caution is needed when investigating the causal factors underlying diversity patterns for large taxonomic groups composed of taxa of different biogeographical affinities. Right-skewed diversity-elevation patterns may be produced by the differential response of taxa with varying biogeographical affinities to climatic factors and MDE. PMID:26488164

Biogeographical Interpretation of Elevational Patterns of Genus Diversity of Seed Plants in Nepal.

PubMed

Li, Miao; Feng, Jianmeng

2015-01-01

This study tests if the biogeographical affinities of genera are relevant for explaining elevational plant diversity patterns in Nepal. We used simultaneous autoregressive (SAR) models to investigate the explanatory power of several predictors in explaining the diversity-elevation relationships shown in genera with different biogeographical affinities. Delta akaike information criterion (ΔAIC) was used for multi-model inferences and selections. Our results showed that both the total and tropical genus diversity peaked below the mid-point of the elevational gradient, whereas that of temperate genera had a nearly symmetrical, unimodal relationship with elevation. The proportion of temperate genera increased markedly with elevation, while that of tropical genera declined. Compared to tropical genera, temperate genera had wider elevational ranges and were observed at higher elevations. Water-related variables, rather than mid-domain effects (MDE), were the most significant predictors of elevational patterns of tropical genus diversity. The temperate genus diversity was influenced by energy availability, but only in quadratic terms of the models. Though climatic factors and mid-domain effects jointly explained most of the variation in the diversity of temperate genera with elevation, the former played stronger roles. Total genus diversity was most strongly influenced by climate and the floristic overlap of tropical and temperate floras, while the influences of mid-domain effects were relatively weak. The influences of water-related and energy-related variables may vary with biogeographical affinities. The elevational patterns may be most closely related to climatic factors, while MDE may somewhat modify the patterns. Caution is needed when investigating the causal factors underlying diversity patterns for large taxonomic groups composed of taxa of different biogeographical affinities. Right-skewed diversity-elevation patterns may be produced by the differential response of taxa with varying biogeographical affinities to climatic factors and MDE.

Aerial multi-camera systems: Accuracy and block triangulation issues

NASA Astrophysics Data System (ADS)

Rupnik, Ewelina; Nex, Francesco; Toschi, Isabella; Remondino, Fabio

2015-03-01

Oblique photography has reached its maturity and has now been adopted for several applications. The number and variety of multi-camera oblique platforms available on the market is continuously growing. So far, few attempts have been made to study the influence of the additional cameras on the behaviour of the image block and comprehensive revisions to existing flight patterns are yet to be formulated. This paper looks into the precision and accuracy of 3D points triangulated from diverse multi-camera oblique platforms. Its coverage is divided into simulated and real case studies. Within the simulations, different imaging platform parameters and flight patterns are varied, reflecting both current market offerings and common flight practices. Attention is paid to the aspect of completeness in terms of dense matching algorithms and 3D city modelling - the most promising application of such systems. The experimental part demonstrates the behaviour of two oblique imaging platforms in real-world conditions. A number of Ground Control Point (GCP) configurations are adopted in order to point out the sensitivity of tested imaging networks and arising block deformations. To stress the contribution of slanted views, all scenarios are compared against a scenario in which exclusively nadir images are used for evaluation.

Quantitative Characterization of the Nanoscale Local Lattice Strain Induced by Sr Dopants in La1.92Sr0.08CuO4

NASA Astrophysics Data System (ADS)

Lin, J. Q.; Liu, X.; Blackburn, E.; Wakimoto, S.; Ding, H.; Islam, Z.; Sinha, S. K.

2018-05-01

The nanometer scale lattice deformation brought about by the dopants in the high temperature superconducting cuprate La2 -xSrx CuO4 (x =0.08 ) was investigated by measuring the associated x-ray diffuse scattering around multiple Bragg peaks. A characteristic diffuse scattering pattern was observed, which can be well described by continuum elastic theory. With the fitted dipole force parameters, the acoustic-type lattice deformation pattern was reconstructed and found to be of similar size to lattice thermal vibration at 7 K. Our results address the long-term concern of dopant introduced local lattice inhomogeneity, and show that the associated nanometer scale lattice deformation is marginal and cannot, alone, be responsible for the patched variation in the spectral gaps observed with scanning tunneling microscopy in the cuprates.

Global variation in elevational diversity patterns

Treesearch

Qinfeng Guo; Douglas A. Kelt; Zhongyu Sun; Hongxiao Liu; Liangjun Hu; Hai Ren; Jun We

2013-01-01

While horizontal gradients of biodiversity have been examined extensively in the past, vertical diversity gradients (elevation, water depth) are attracting increasing attention. We compiled data from 443 elevational gradients involving diverse organisms worldwide to investigate how elevational diversity patterns may vary between the Northern and Southern hemispheres...

Kirigami Nanocomposites as Wide-Angle Diffraction Gratings.

PubMed

Xu, Lizhi; Wang, Xinzhi; Kim, Yoonseob; Shyu, Terry C; Lyu, Jing; Kotov, Nicholas A

2016-06-28

Beam steering devices represent an essential part of an advanced optics toolbox and are needed in a spectrum of technologies ranging from astronomy and agriculture to biosensing and networked vehicles. Diffraction gratings with strain-tunable periodicity simplify beam steering and can serve as a foundation for light/laser radar (LIDAR/LADAR) components of robotic systems. However, the mechanical properties of traditional materials severely limit the beam steering angle and cycle life. The large strain applied to gratings can severely impair the device performance both in respect of longevity and diffraction pattern fidelity. Here, we show that this problem can be resolved using micromanufactured kirigami patterns from thin film nanocomposites based on high-performance stiff plastics, metals, and carbon nanotubes, etc. The kirigami pattern of microscale slits reduces the stochastic concentration of strain in stiff nanocomposites including those made by layer-by-layer assembly (LBL). The slit patterning affords reduction of strain by 2 orders of magnitude for stretching deformation and consequently enables reconfigurable optical gratings with over a 100% range of period tunability. Elasticity of the stiff nanocomposites and plastics makes possible cyclic reconfigurability of the grating with variable time constant that can also be referred to as 4D kirigami. High-contrast, sophisticated diffraction patterns with as high as fifth diffraction order can be obtained. The angular range of beam steering can be as large as 6.5° for a 635 nm laser beam compared to ∼1° in surface-grooved elastomer gratings and ∼0.02° in MEMS gratings. The versatility of the kirigami patterns, the diversity of the available nanocomposite materials, and their advantageous mechanical properties of the foundational materials open the path for engineering of reconfigurable optical elements in LIDARs essential for autonomous vehicles and other optical devices with spectral range determined by the kirigami periodicity.

Changes in spinal alignment.

PubMed

Veintemillas Aráiz, M T; Beltrán Salazar, V P; Rivera Valladares, L; Marín Aznar, A; Melloni Ribas, P; Valls Pascual, R

2016-04-01

Spinal misalignments are a common reason for consultation at primary care centers and specialized departments. Misalignment has diverse causes and is influenced by multiple factors: in adolescence, the most frequent misalignment is scoliosis, which is idiopathic in 80% of cases and normally asymptomatic. In adults, the most common cause is degenerative. It is important to know the natural history and to detect factors that might predict progression. The correct diagnosis of spinal deformities requires specific imaging studies. The degree of deformity determines the type of treatment. The aim is to prevent progression of the deformity and to recover the flexibility and balance of the body. Copyright © 2016 SERAM. Published by Elsevier España, S.L.U. All rights reserved.

Relative role of transfer zones in controlling sequence stacking patterns and facies distribution: insights from the Fushan Depression, South China Sea

NASA Astrophysics Data System (ADS)

Liu, Entao; Wang, Hua; Li, Yuan; Huang, Chuanyan

2015-04-01

In sedimentary basins, a transfer zone can be defined as a coordinated system of deformational features which has good prospects for hydrocarbon exploration. Although the term 'transfer zone' has been widely applied to the study of extensional basins, little attention has been paid to its controlling effect on sequence tracking pattern and depositional facies distribution. Fushan Depression is a half-graben rift sub-basin, located in the southeast of the Beibuwan Basin, South China Sea. In this study, comparative analysis of seismic reflection, palaeogeomorphology, fault activity and depositional facies distribution in the southern slope indicates that three different types of sequence stacking patterns (i.e. multi-level step-fault belt in the western area, flexure slope belt in the central area, gentle slope belt in the eastern area) were developed along the southern slope, together with a large-scale transfer zone in the central area, at the intersection of the western and eastern fault systems. Further analysis shows that the transfer zone played an important role in the diversity of sequence stacking patterns in the southern slope by dividing the Fushan Depression into two non-interfering tectonic systems forming different sequence patterns, and leading to the formation of the flexure slope belt in the central area. The transfer zone had an important controlling effect on not only the diversity of sequence tracking patterns, but also the facies distribution on the relay ramp. During the high-stand stage, under the controlling effect of the transfer zone, the sediments contain a significant proportion of coarser material accumulated and distributed along the ramp axis. By contrast, during the low-stand stage, the transfer zone did not seem to contribute significantly to the low-stand fan distribution which was mainly controlled by the slope gradient (palaeogeomorphology). Therefore, analysis of the transfer zone can provide a new perspective for basin analysis. In addition, the transfer zone area demonstrated unique hydrocarbon accumulation models different from the western and eastern areas. It was not only a structural high combined with sufficient coarse-grained reservoir quality sands, but was also associated with large-scale sublacustrine fan deposits with high quality reservoirs, indicating that the recognition of transfer zones can improve the prediction of hydrocarbon occurrences in similar settings.

Spatial greenstone-gneiss relationships: Evidence from mafic-ultramafic xenolith distribution patterns

NASA Technical Reports Server (NTRS)

Glikson, A. Y.

1986-01-01

The distribution patterns of mafic-ultramafic xenoliths within Archaean orthogneiss terrain furnish an essential key for the elucidation of granite-greenstone relations. Most greenstone belts constitute mega-xenoliths rather than primary basin structures. Transition along strike and across strike between stratigraphically low greenstone sequences and xenolith chains demonstrate their contemporaneity. These terrains represent least deformed cratonic islands within an otherwise penetratively foliated deformed gneiss-greenstone crust. Whereas early greenstone sequences are invariably intruded by tonalitic/trondhjemitic/granodioritic gneisses, stratigraphically higher successions may locally overlap older gneiss terrains and their entrained xenoliths unconformably. The contiguity of xenolith patterns suggests their derivation as relics of regional mafic-ultramafic volcanic crustal units and places limits on horizontal movements between individual crustal blocks.

Observation of electromigration in a Cu thin line by in situ coherent x-ray diffraction microscopy

NASA Astrophysics Data System (ADS)

Takahashi, Yukio; Nishino, Yoshinori; Furukawa, Hayato; Kubo, Hideto; Yamauchi, Kazuto; Ishikawa, Tetsuya; Matsubara, Eiichiro

2009-06-01

Electromigration (EM) in a 1-μm-thick Cu thin line was investigated by in situ coherent x-ray diffraction microscopy (CXDM). Characteristic x-ray speckle patterns due to both EM-induced voids and thermal deformation in the thin line were observed in the coherent x-ray diffraction patterns. Both parts of the voids and the deformation were successfully visualized in the images reconstructed from the diffraction patterns. This result not only represents the first demonstration of the visualization of structural changes in metallic materials by in situ CXDM but is also an important step toward studying the structural dynamics of nanomaterials using x-ray free-electron lasers in the near future.

Consistently inconsistent drivers of microbial diversity and abundance at macroecological scales.

PubMed

Hendershot, John Nicholas; Read, Quentin D; Henning, Jeremiah A; Sanders, Nathan J; Classen, Aimée T

2017-07-01

Macroecology seeks to understand broad-scale patterns in the diversity and abundance of organisms, but macroecologists typically study aboveground macroorganisms. Belowground organisms regulate numerous ecosystem functions, yet we lack understanding of what drives their diversity. Here, we examine the controls on belowground diversity along latitudinal and elevational gradients. We performed a global meta-analysis of 325 soil communities across 20 studies conducted along temperature and soil pH gradients. Belowground taxa, whether bacterial or fungal, observed along a given gradient of temperature or soil pH were equally likely to show a linear increase, linear decrease, humped pattern, trough-shaped pattern, or no pattern in diversity along the gradient. Land-use intensity weakly affected the diversity-temperature relationship, but no other factor did so. Our study highlights disparities among diversity patterns of soil microbial communities. Belowground diversity may be controlled by the associated climatic and historical contexts of particular gradients, by factors not typically measured in community-level studies, or by processes operating at scales that do not match the temporal and spatial scales under study. Because these organisms are responsible for a suite of key processes, understanding the drivers of their distribution and diversity is fundamental to understanding the functioning of ecosystems. © 2017 by the Ecological Society of America.

Semantic modeling of the structural and process entities during plastic deformation of crystals and rocks

NASA Astrophysics Data System (ADS)

Babaie, Hassan; Davarpanah, Armita

2016-04-01

We are semantically modeling the structural and dynamic process components of the plastic deformation of minerals and rocks in the Plastic Deformation Ontology (PDO). Applying the Ontology of Physics in Biology, the PDO classifies the spatial entities that participate in the diverse processes of plastic deformation into the Physical_Plastic_Deformation_Entity and Nonphysical_Plastic_Deformation_Entity classes. The Material_Physical_Plastic_Deformation_Entity class includes things such as microstructures, lattice defects, atoms, liquid, and grain boundaries, and the Immaterial_Physical_Plastic_Deformation_Entity class includes vacancies in crystals and voids along mineral grain boundaries. The objects under the many subclasses of these classes (e.g., crystal, lattice defect, layering) have spatial parts that are related to each other through taxonomic (e.g., Line_Defect isA Lattice_Defect), structural (mereological, e.g., Twin_Plane partOf Twin), spatial-topological (e.g., Vacancy adjacentTo Atom, Fluid locatedAlong Grain_Boundary), and domain specific (e.g., displaces, Fluid crystallizes Dissolved_Ion, Void existsAlong Grain_Boundary) relationships. The dynamic aspect of the plastic deformation is modeled under the dynamical Process_Entity class that subsumes classes such as Recrystallization and Pressure_Solution that define the flow of energy amongst the physical entities. The values of the dynamical state properties of the physical entities (e.g., Chemical_Potential, Temperature, Particle_Velocity) change while they take part in the deformational processes such as Diffusion and Dislocation_Glide. The process entities have temporal parts (phases) that are related to each other through temporal relations such as precedes, isSubprocessOf, and overlaps. The properties of the physical entities, defined under the Physical_Property class, change as they participate in the plastic deformational processes. The properties are categorized into dynamical, constitutive, spatial, temporal, statistical, and thermodynamical. The dynamical properties, categorized under the Dynamical_Rate_Property and Dynamical_State_Property classes, subsume different classes of properties (e.g., Fluid_Flow_Rate, Temperature, Chemical_Potential, Displacement, Electrical_Charge) based on the physical domain (e.g., fluid, heat, chemical, solid, electrical). The properties are related to the objects under the Physical_Entity class through diverse object type (e.g., physicalPropertyOf) and data type (e.g., Fluid_Pressure unit 'MPa') properties. The changes of the dynamical properties of the physical entities, described by the empirical laws (equations) modeled by experimental structural geologists, are modeled through the Physical_Property_Dependency class that subsumes the more specialized constitutive, kinetic, and thermodynamic expressions of the relationships among the dynamic properties. Annotation based on the PDO will make it possible to integrate and reuse experimental plastic deformation data, knowledge, and simulation models, and conduct semantic-based search of the source data originating from different rock testing laboratories.

Analytical volcano deformation source models

USGS Publications Warehouse

Lisowski, Michael; Dzurisin, Daniel

2007-01-01

Primary volcanic landforms are created by the ascent and eruption of magma. The ascending magma displaces and interacts with surrounding rock and fluids as it creates new pathways, flows through cracks or conduits, vesiculates, and accumulates in underground reservoirs. The formation of new pathways and pressure changes within existing conduits and reservoirs stress and deform the surrounding rock. Eruption products load the crust. The pattern and rate of surface deformation around volcanoes reflect the tectonic and volcanic processes transmitted to the surface through the mechanical properties of the crust.

Attending to Communication and Patterns of Interaction: Culturally Sensitive Mental Health Care for Groups of Urban, Ethnically Diverse, Impoverished, and Underserved Women.

PubMed

Molewyk Doornbos, Mary; Zandee, Gail Landheer; DeGroot, Joleen

2014-07-01

The United States is ethnically diverse. This diversity presents challenges to nurses, who, without empirical evidence to design culturally congruent interventions, may contribute to mental health care disparities. Using Leininger's theory of culture care diversity and universality, this study documented communication and interaction patterns of ethnically diverse, urban, impoverished, and underserved women. Using a community-based participatory research framework, 61 Black, Hispanic, and White women participated in focus groups around their experiences with anxiety/depression. Researchers recorded verbal communication, nonverbal behavior, and patterns of interaction. The women's communication and interaction patterns gave evidence of three themes that were evident across all focus groups and five subthemes that emerged along ethnic lines. The results suggest cultural universalities and cultural uniquenesses relative to the communication and interaction patterns of urban, ethnically diverse, impoverished, and underserved women that may assist in the design of culturally sensitive mental health care. © The Author(s) 2014.

Properties of axially loaded implant-abutment assemblies using digital holographic interferometry analysis.

PubMed

Brozović, Juraj; Demoli, Nazif; Farkaš, Nina; Sušić, Mato; Alar, Zeljko; Gabrić Pandurić, Dragana

2014-03-01

The aim of this study was to (i) obtain the force-related interferometric patterns of loaded dental implant-abutment assemblies differing in diameter and brand using digital holographic interferometry (DHI) and (ii) determine the influence of implant diameter on the extent of load-induced implant deformation by quantifying and comparing the obtained interferometric data. Experiments included five implant brands (Ankylos, Astra Tech, blueSKY, MIS and Straumann), each represented by a narrow and a wide diameter implant connected to a corresponding abutment. A quasi-Fourier setup with a 25mW helium-neon laser was used for interferometric measurements in the cervical 5mm of the implants. Holograms were recorded in two conditions per measurement: a 10N preloaded and a measuring-force loaded assembly, resulting with an interferogram. This procedure was repeated throughout the whole process of incremental axial loading, from 20N to 120N. Each measurement series was repeated three times for each assembly, with complete dismantling of the implant-loading device in between. Additional software analyses calculated deformation data. Deformations were presented as mean values±standard deviations. Statistical analysis was performed using linear mixed effects modeling in R's lme4 package. Implants exhibited linear deformation patterns. The wide diameter group had lower mean deformation values than the narrow diameter group. The diameter significantly affected the deformation throughout loading sessions. This study gained in vitro implant performance data, compared the deformations in implant bodies and numerically stated the biomechanical benefits of wider diameter implants. Copyright © 2013 Academy of Dental Materials. Published by Elsevier Ltd. All rights reserved.

Axial-type olivine crystallographic preferred orientations: The effect of strain geometry on mantle texture

NASA Astrophysics Data System (ADS)

Chatzaras, Vasileios; Kruckenberg, Seth C.; Cohen, Shaina M.; Medaris, L. Gordon; Withers, Anthony C.; Bagley, Brian

2016-07-01

The effect of finite strain geometry on crystallographic preferred orientation (CPO) is poorly constrained in the upper mantle. Specifically, the relationship between shape preferred orientation (SPO) and CPO in mantle rocks remains unclear. We analyzed a suite of 40 spinel peridotite xenoliths from Marie Byrd Land, West Antarctica. X-ray computed tomography allows for quantification of spinel SPO, which ranges from prolate to oblate shape. Electron backscatter diffraction analysis reveals a range of olivine CPO patterns, including A-type, axial-[010], axial-[100], and B-type patterns. Until now, these CPO types were associated with different deformation conditions, deformation mechanisms, or strain magnitudes. Microstructures and deformation mechanism maps suggest that deformation in all studied xenoliths is dominated by dislocation-accommodated grain boundary sliding. For the range of temperatures (780-1200°C), extraction depths (39-72 km), differential stresses (2-60 MPa), and water content (up to 500 H/106Si) of the xenolith suite, variations in olivine CPO do not correlate with changes in deformation conditions. Here we establish for the first time in naturally deformed mantle rocks that finite strain geometry controls the development of axial-type olivine CPOs; axial-[010] and axial-[100] CPOs form in relation to oblate and prolate fabric ellipsoids, respectively. Girdling of olivine crystal axes results from intracrystalline slip with activation of multiple slip systems and grain boundary sliding. Our results demonstrate that mantle deformation may deviate from simple shear. Olivine texture in field studies and seismic anisotropy in geophysical investigations can provide critical constraints for the 3-D strain in the upper mantle.

Measurements of red cell deformability and hydration reflect HbF and HbA2 in blood from patients with sickle cell anemia.

PubMed

Parrow, Nermi L; Tu, Hongbin; Nichols, James; Violet, Pierre-Christian; Pittman, Corinne A; Fitzhugh, Courtney; Fleming, Robert E; Mohandas, Narla; Tisdale, John F; Levine, Mark

2017-06-01

Decreased erythrocyte deformability, as measured by ektacytometry, may be associated with disease severity in sickle cell anemia (SCA). Heterogeneous populations of rigid and deformable cells in SCA blood result in distortions of diffraction pattern measurements that correlate with the concentration of hemoglobin S (HbS) and the percentage of irreversibly sickled cells. We hypothesize that red cell heterogeneity, as well as deformability, will also be influenced by the concentration of alternative hemoglobins such as fetal hemoglobin (HbF) and the adult variant, HbA 2 . To test this hypothesis, we investigate the relationship between diffraction pattern distortion, osmotic gradient ektacytometry parameters, and the hemoglobin composition of SCA blood. We observe a correlation between the extent of diffraction pattern distortions and percentage of HbF and HbA 2 . Osmotic gradient ektacytometry data indicate that minimum elongation in the hypotonic region is positively correlated with HbF, as is the osmolality at which it occurs. The osmolality at both minimum and maximum elongation is inversely correlated with HbS and HbA 2 . These data suggest that HbF may effectively improve surface-to-volume ratio and osmotic fragility in SCA erythrocytes. HbA 2 may be relatively ineffective in improving these characteristics or cellular hydration at the levels found in this patient cohort. Copyright © 2017. Published by Elsevier Inc.

Small-scale topography modulates elevational α-, β- and γ-diversity of Andean leaf beetles.

PubMed

Thormann, Birthe; Ahrens, Dirk; Espinosa, Carlos Iván; Armijos, Diego Marín; Wagner, Thomas; Wägele, Johann W; Peters, Marcell K

2018-05-01

Elevational diversity gradients are typically studied without considering the complex small-scale topography of large mountains, which generates habitats of strongly different environmental conditions within the same elevational zones. Here we analyzed the importance of small-scale topography for elevational diversity patterns of hyperdiverse tropical leaf beetles (Coleoptera: Chrysomelidae). We compared patterns of elevational diversity and species composition of beetles in two types of forests (on mountain ridges and in valleys) and analyzed whether differences in the rate of species turnover among forest habitats lead to shifts in patterns of elevational diversity when scaling up from the local study site to the elevational belt level. We sampled beetle assemblages at 36 sites in the Podocarpus National Park, Ecuador, which were equally distributed over two forest habitats and three elevational levels. DNA barcoding and Poisson tree processes modelling were used to delimitate putative species. On average, local leaf beetle diversity showed a clear hump-shaped pattern. However, only diversity in forests on mountain ridges peaked at mid-elevation, while beetle diversity in valleys was similarly high at low- and mid-elevation and only declined at highest elevations. A higher turnover of species assemblages at lower than at mid-elevations caused a shift from a hump-shaped diversity pattern found at the local level to a low-elevation plateau pattern (with similar species numbers at low and mid-elevation) at the elevational belt level. Our study reveals an important role of small-scale topography and spatial scale for the inference on gradients of elevational species diversity.

A novel orthogonal transmission-virtual grating method and its applications in measuring micro 3-D shape of deformed liquid surface

NASA Astrophysics Data System (ADS)

Liu, Zhanwei; Huang, Xianfu; Xie, Huimin

2013-02-01

Deformed liquid surface directly involves the surface tension, which can always be used to account for the kinematics of aquatic insects in gas-liquid interface and the light metal floating on the water surface. In this paper a novel method based upon deformed transmission-virtual grating is proposed for determination of deformed liquid surface. By addressing an orthogonal grating (1-5 line/mm) under the transparent water groove and then capturing images from upset of the deformed water surface, a displacement vector of full-field which directly associates the 3-D deformed liquid surface then can be evaluated by processing the recorded deformed fringe pattern in the two directions (x- and y-direction). Theories and equations for the method are thoroughly delivered. Validation test to measure the deformed water surface caused by a Chinese 1-cent coin has been conducted to demonstrate the ability of the developed method. The obtained results show that the method is robust in determination of micro 3-D surface of deformed liquid with a submicron scale resolution and with a wide range application scope.

Noninvasive, three-dimensional full-field body sensor for surface deformation monitoring of human body in vivo.

PubMed

Chen, Zhenning; Shao, Xinxing; He, Xiaoyuan; Wu, Jialin; Xu, Xiangyang; Zhang, Jinlin

2017-09-01

Noninvasive, three-dimensional (3-D), full-field surface deformation measurements of the human body are important for biomedical investigations. We proposed a 3-D noninvasive, full-field body sensor based on stereo digital image correlation (stereo-DIC) for surface deformation monitoring of the human body in vivo. First, by applying an improved water-transfer printing (WTP) technique to transfer optimized speckle patterns onto the skin, the body sensor was conveniently and harmlessly fabricated directly onto the human body. Then, stereo-DIC was used to achieve 3-D noncontact and noninvasive surface deformation measurements. The accuracy and efficiency of the proposed body sensor were verified and discussed by considering different complexions. Moreover, the fabrication of speckle patterns on human skin, which has always been considered a challenging problem, was shown to be feasible, effective, and harmless as a result of the improved WTP technique. An application of the proposed stereo-DIC-based body sensor was demonstrated by measuring the pulse wave velocity of human carotid artery. (2017) COPYRIGHT Society of Photo-Optical Instrumentation Engineers (SPIE).

Chapter F. The Loma Prieta, California, Earthquake of October 17, 1989 - Tectonic Processes and Models

USGS Publications Warehouse

Simpson, Robert W.

1994-01-01

If there is a single theme that unifies the diverse papers in this chapter, it is the attempt to understand the role of the Loma Prieta earthquake in the context of the earthquake 'machine' in northern California: as the latest event in a long history of shocks in the San Francisco Bay region, as an incremental contributor to the regional deformation pattern, and as a possible harbinger of future large earthquakes. One of the surprises generated by the earthquake was the rather large amount of uplift that occurred as a result of the reverse component of slip on the southwest-dipping fault plane. Preearthquake conventional wisdom had been that large earthquakes in the region would probably be caused by horizontal, right-lateral, strike-slip motion on vertical fault planes. In retrospect, the high topography of the Santa Cruz Mountains and the elevated marine terraces along the coast should have provided some clues. With the observed ocean retreat and the obvious uplift of the coast near Santa Cruz that accompanied the earthquake, Mother Nature was finally caught in the act. Several investigators quickly saw the connection between the earthquake uplift and the long-term evolution of the Santa Cruz Mountains and realized that important insights were to be gained by attempting to quantify the process of crustal deformation in terms of Loma Prieta-type increments of northward transport and fault-normal shortening.

Congenital scoliosis of a bottlenose dolphin.

PubMed

DeLynn, Ruth; Lovewell, Gretchen; Wells, Randall S; Early, Greg

2011-10-01

There are many reports of cetaceans with deformed and twisted bodies. Skeletal pathology descriptions have shown changes to axial skeletons because of injury, trauma, or disease. We present a bottlenose dolphin (Tursiops truncatus) that shows characteristic patterns of congenital skeletal deformity, including malformed vertebrae, ribs, and sternum. These malformations were consistent with segmentation and formation defects arising during early embryonic development, with a resulting cascade of deformity and compensatory pathology. In spite of severe deformities, the dolphin lived 18 yr, raised two calves, and likely would have lived longer had she not succumbed to sepsis and the piercing of the aorta caused by a stingray barb.

The importance of stress percolation patterns in rocks and other polycrystalline materials.

PubMed

Burnley, P C

2013-01-01

A new framework for thinking about the deformation behavior of rocks and other heterogeneous polycrystalline materials is proposed, based on understanding the patterns of stress transmission through these materials. Here, using finite element models, I show that stress percolates through polycrystalline materials that have heterogeneous elastic and plastic properties of the same order as those found in rocks. The pattern of stress percolation is related to the degree of heterogeneity in and statistical distribution of the elastic and plastic properties of the constituent grains in the aggregate. The development of these stress patterns leads directly to shear localization, and their existence provides insight into the formation of rhythmic features such as compositional banding and foliation in rocks that are reacting or dissolving while being deformed. In addition, this framework provides a foundation for understanding and predicting the macroscopic rheology of polycrystalline materials based on single-crystal elastic and plastic mechanical properties.

The importance of stress percolation patterns in rocks and other polycrystalline materials

PubMed Central

Burnley, P.C.

2013-01-01

A new framework for thinking about the deformation behavior of rocks and other heterogeneous polycrystalline materials is proposed, based on understanding the patterns of stress transmission through these materials. Here, using finite element models, I show that stress percolates through polycrystalline materials that have heterogeneous elastic and plastic properties of the same order as those found in rocks. The pattern of stress percolation is related to the degree of heterogeneity in and statistical distribution of the elastic and plastic properties of the constituent grains in the aggregate. The development of these stress patterns leads directly to shear localization, and their existence provides insight into the formation of rhythmic features such as compositional banding and foliation in rocks that are reacting or dissolving while being deformed. In addition, this framework provides a foundation for understanding and predicting the macroscopic rheology of polycrystalline materials based on single-crystal elastic and plastic mechanical properties. PMID:23823992

The ground subsidence anomaly investigation around Ambala, India by InSAR and spatial analyses: Why and how the Ambala city behaves as the most significant subsidence region in the Northwest India?

NASA Astrophysics Data System (ADS)

Kim, J.; Lin, S. Y.; Tsai, Y.; Singh, S.; Singh, T.

2017-12-01

A large ground deformation which may be caused by a significant groundwater depletion of the Northwest India Aquifer has been successfully observed throughout space geodesy techniques (Tsai et al, 2016). Employing advanced time-series ScanSAR InSAR analysis and Gravity Recovery and Climate Experiment (GRACE) satellites data, it revealed 400-km wide huge ground deformation in and around Haryana. It was further notified that the Ambala city located in northern Haryana district shown the most significant ground subsidence with maximum cumulative deformation up to 0.2 meters within 3 years in contrast to the nearby cities such as Patiala and Chandigarh that did not present similar subsidence. In this study, we investigated the details of "Ambala Anomaly" employing advanced time-series InSAR and spatial analyses together with local geology and anthropogenic contexts and tried to identify the factors causing such a highly unique ground deformation pattern. To explore the pattern and trend of Ambala' subsidence, we integrated the time-series deformation results of both ascending L-band PALSAR-1 (Phased Array type L-band Synthetic Aperture Radar) from 2007/1 to 2011/1 and descending C-band ASAR (Advanced Synthetic Aperture Radar) from 2008/9 to 2010/8 to process the 3D decomposition, expecting to reveal the asymmetric movement of the surface. In addition. The spatial analyses incorporating detected ground deformations and local economical/social factors were then applied for the interpretation of "Ambala Anomaly". The detailed interrelationship of driving factors of the "Ambala Anomaly" and the spatial pattern of corresponding ground subsidence will be further demonstrated. After all, we determined the uniqueness of Ambala subsidence possibly be driven by both anthropogenic behaviors including the rapid growth rate of population and constructing of industrial centers as well as the natural geological characteristics and sediment deposition.

Masticatory loadings and cranial deformation in Macaca fascicularis: a finite element analysis sensitivity study.

PubMed

Fitton, L C; Shi, J F; Fagan, M J; O'Higgins, P

2012-07-01

Biomechanical analyses are commonly conducted to investigate how craniofacial form relates to function, particularly in relation to dietary adaptations. However, in the absence of corresponding muscle activation patterns, incomplete muscle data recorded experimentally for different individuals during different feeding tasks are frequently substituted. This study uses finite element analysis (FEA) to examine the sensitivity of the mechanical response of a Macaca fascicularis cranium to varying muscle activation patterns predicted via multibody dynamic analysis. Relative to the effects of varying bite location, the consequences of simulated variations in muscle activation patterns and of the inclusion/exclusion of whole muscle groups were investigated. The resulting cranial deformations were compared using two approaches; strain maps and geometric morphometric analyses. The results indicate that, with bite force magnitude controlled, the variations among the mechanical responses of the cranium to bite location far outweigh those observed as a consequence of varying muscle activations. However, zygomatic deformation was an exception, with the activation levels of superficial masseter being most influential in this regard. The anterior portion of temporalis deforms the cranial vault, but the remaining muscles have less profound effects. This study for the first time systematically quantifies the sensitivity of an FEA model of a primate skull to widely varying masticatory muscle activations and finds that, with the exception of the zygomatic arch, reasonable variants of muscle loading for a second molar bite have considerably less effect on cranial deformation and the resulting strain map than does varying molar bite point. The implication is that FEA models of biting crania will generally produce acceptable estimates of deformation under load as long as muscle activations and forces are reasonably approximated. In any one FEA study, the biological significance of the error in applied muscle forces is best judged against the magnitude of the effect that is being investigated. © 2012 The Authors. Journal of Anatomy © 2012 Anatomical Society.

Masticatory loadings and cranial deformation in Macaca fascicularis: a finite element analysis sensitivity study

PubMed Central

Fitton, L C; Shi, J F; Fagan, M J; O’Higgins, P

2012-01-01

Biomechanical analyses are commonly conducted to investigate how craniofacial form relates to function, particularly in relation to dietary adaptations. However, in the absence of corresponding muscle activation patterns, incomplete muscle data recorded experimentally for different individuals during different feeding tasks are frequently substituted. This study uses finite element analysis (FEA) to examine the sensitivity of the mechanical response of a Macaca fascicularis cranium to varying muscle activation patterns predicted via multibody dynamic analysis. Relative to the effects of varying bite location, the consequences of simulated variations in muscle activation patterns and of the inclusion/exclusion of whole muscle groups were investigated. The resulting cranial deformations were compared using two approaches; strain maps and geometric morphometric analyses. The results indicate that, with bite force magnitude controlled, the variations among the mechanical responses of the cranium to bite location far outweigh those observed as a consequence of varying muscle activations. However, zygomatic deformation was an exception, with the activation levels of superficial masseter being most influential in this regard. The anterior portion of temporalis deforms the cranial vault, but the remaining muscles have less profound effects. This study for the first time systematically quantifies the sensitivity of an FEA model of a primate skull to widely varying masticatory muscle activations and finds that, with the exception of the zygomatic arch, reasonable variants of muscle loading for a second molar bite have considerably less effect on cranial deformation and the resulting strain map than does varying molar bite point. The implication is that FEA models of biting crania will generally produce acceptable estimates of deformation under load as long as muscle activations and forces are reasonably approximated. In any one FEA study, the biological significance of the error in applied muscle forces is best judged against the magnitude of the effect that is being investigated. PMID:22690885

Horizontal ground deformation patterns and magma storage during the Puu Oo eruption of Kilauea volcano, Hawaii: episodes 22-42

USGS Publications Warehouse

Hoffmann, J.P.; Ulrich, G.E.; Garcia, M.O.

1990-01-01

Horizontal ground deformation measurements were made repeatedly with an electronic distance meter near the Puu Oo eruption site approximately perpendicular to Kilauea's east rift zone (ERZ) before and after eruptive episodes 22-42. Line lengths gradually extended during repose periods and rapidly contracted about the same amount following eruptions. The repeated extension and contraction of the measured lines are best explained by the elastic response of the country rock to the addition and subsequent eruption of magma from a local reservoir. The deformation patterns are modeled to constrain the geometry and location of the local reservoir near Puu Oo. The observed deformation is consistent with deformation patterns that would be produced by the expansion of a shallow, steeply dipping dike just uprift of Puu Oo striking parallel to the trend of the ERZ. The modeled dike is centered about 800 m uprift of Puu Oo. Its top is at a depth of 0.4 km, its bottom at about 2.9 km, and the length is about 1.6 km; the dike strikes N65?? E and dips at about 87??SE. The model indicates that the dike expanded by 11 cm during repose periods, for an average volumetric expansion of nearly 500 000 m3. The volume of magma added to the dike during repose periods was variable but correlates positively with the volume of erupted lava of the subsequent eruption and represents about 8% of the new lava extruded. Dike geometry and expansion values are used to estimate the pressure increase near the eruption site due to the accumulation of magma during repose periods. On average, vent pressures increased by about 0.38 MPa during the repose periods, one-third of the pressure increase at the summit. The model indicates that the dikelike body below Puu Oo grew in volume from 3 million cubic meters (Mm3) to about 10-12 Mm3 during the series of eruptions. The width of this body was probably about 2.5-3.0 m. No net long-term deformation was detected along the measured deformation lines. ?? 1990 Springer-Verlag.

Computational neuroanatomy using brain deformations: From brain parcellation to multivariate pattern analysis and machine learning.

PubMed

Davatzikos, Christos

2016-10-01

The past 20 years have seen a mushrooming growth of the field of computational neuroanatomy. Much of this work has been enabled by the development and refinement of powerful, high-dimensional image warping methods, which have enabled detailed brain parcellation, voxel-based morphometric analyses, and multivariate pattern analyses using machine learning approaches. The evolution of these 3 types of analyses over the years has overcome many challenges. We present the evolution of our work in these 3 directions, which largely follows the evolution of this field. We discuss the progression from single-atlas, single-registration brain parcellation work to current ensemble-based parcellation; from relatively basic mass-univariate t-tests to optimized regional pattern analyses combining deformations and residuals; and from basic application of support vector machines to generative-discriminative formulations of multivariate pattern analyses, and to methods dealing with heterogeneity of neuroanatomical patterns. We conclude with discussion of some of the future directions and challenges. Copyright © 2016. Published by Elsevier B.V.

Auxiliary drying to prevent pattern collapse in high aspect ratio nanostructures

NASA Astrophysics Data System (ADS)

Liu, Gang; Zhou, Jie; Xiong, Ying; Zhang, Xiaobo; Tian, Yangchao

2011-07-01

Many defects are generated in densely packed high aspect ratio structures during nanofabrication. Pattern collapse is one of the serious problems that may arise, mainly due to the capillary force during drying after the rinsing process. In this paper, a method of auxiliary drying is presented to prevent pattern collapse in high aspect ratio nanostructures by adding an auxiliary substrate as a reinforcing rib to restrict deformation and to balance the capillary force. The principle of the method is presented based on the analysis of pattern collapse. A finite element method is then applied to analyze the deformation of the resist beams caused by the surface tension using the ANSYS software, and the effect of the nanostructure's length to width ratio simulated and analyzed. Finally, the possible range of applications based on the proposed method is discussed. Our results show that the aspect ratio may be increased 2.6 times without pattern collapse; furthermore, this method can be widely used in the removal of solvents in micro- and nanofabrication.

Auxiliary drying to prevent pattern collapse in high aspect ratio nanostructures.

PubMed

Liu, Gang; Zhou, Jie; Xiong, Ying; Zhang, Xiaobo; Tian, Yangchao

2011-07-29

Many defects are generated in densely packed high aspect ratio structures during nanofabrication. Pattern collapse is one of the serious problems that may arise, mainly due to the capillary force during drying after the rinsing process. In this paper, a method of auxiliary drying is presented to prevent pattern collapse in high aspect ratio nanostructures by adding an auxiliary substrate as a reinforcing rib to restrict deformation and to balance the capillary force. The principle of the method is presented based on the analysis of pattern collapse. A finite element method is then applied to analyze the deformation of the resist beams caused by the surface tension using the ANSYS software, and the effect of the nanostructure's length to width ratio simulated and analyzed. Finally, the possible range of applications based on the proposed method is discussed. Our results show that the aspect ratio may be increased 2.6 times without pattern collapse; furthermore, this method can be widely used in the removal of solvents in micro- and nanofabrication.

Computational neuroanatomy using brain deformations: From brain parcellation to multivariate pattern analysis and machine learning

PubMed Central

Davatzikos, Christos

2017-01-01

The past 20 years have seen a mushrooming growth of the field of computational neuroanatomy. Much of this work has been enabled by the development and refinement of powerful, high-dimensional image warping methods, which have enabled detailed brain parcellation, voxel-based morphometric analyses, and multivariate pattern analyses using machine learning approaches. The evolution of these 3 types of analyses over the years has overcome many challenges. We present the evolution of our work in these 3 directions, which largely follows the evolution of this field. We discuss the progression from single-atlas, single-registration brain parcellation work to current ensemble-based parcellation; from relatively basic mass-univariate t-tests to optimized regional pattern analyses combining deformations and residuals; and from basic application of support vector machines to generative-discriminative formulations of multivariate pattern analyses, and to methods dealing with heterogeneity of neuroanatomical patterns. We conclude with discussion of some of the future directions and challenges. PMID:27514582

Larval adaptations and patterns of brachiopod diversity in space and time

NASA Technical Reports Server (NTRS)

Valentine, J. W.; Jablonski, D.

1983-01-01

Modern biodistributional patterns suggest that modes of larval development are a factor in determining the patterns of diversity in benthic invertebrates. Paleozoic brachiopods had diversity patterns suggesting that they possessed both planktotrophic and nonplanktotrophic modes. It is presently hypothesized that the planktotrophic lineages were lost to extinction, largely or entirely during the Permian-Triassic event, and that the failure of the articulate brachiopods to regain their former importance is substantially due to their nonplanktotrophic developmental mode.

Impact of Diverse Hydrologic Pathways, 3D Failure Geometries, and Unsaturated Soil Suctions on Shallow Landsliding

NASA Astrophysics Data System (ADS)

Reid, M. E.; Iverson, R. M.; Brien, D. L.; Iverson, N. R.; Lahusen, R. G.; Logan, M.

2016-12-01

Shallow landslides and ensuing debris flows can be triggered by diverse hydrologic phenomena such as groundwater inflow, prolonged moderate-intensity precipitation, or bursts of high-intensity precipitation. However, hazard assessments typically rely on simplistic hydrologic models that disregard this diversity. We used the USGS debris-flow flume to conduct controlled, field-scale slope failure experiments designed to investigate the effects of diverse hydrologic pathways, as well as the effects of 3D landslide geometries and suction stresses in unsaturated soil. Using overhead sprinklers or groundwater injectors on the flume bed, we induced failures in 6 m3 (0.65-m thick and 2-m wide) prisms of loamy sand on a 31º slope. We used 50 sensors to monitor soil deformation, variably saturated pore pressures, and moisture changes. We also determined shear strength, hydraulic conductivity, and unsaturated moisture retention characteristics from ancillary tests. The three hydrologic scenarios noted above led to different behaviors. Groundwater injection and prolonged infiltration created differing soil moisture patterns. Intense sprinkling bursts caused rapid failure without development of widespread positive pore pressures. We simulated these observed differences numerically by coupling 2D variably saturated groundwater flow modeling and 3D limit-equilibrium analysis. We also simulated the time evolution of changes in factors of safety, and quantified the mechanical effects of 3D geometry and unsaturated soil suction on stability. When much of the soil became relatively wet, effects of 3D geometry and soil suction produced slight increases ( 10-20%) in factors of safety. Suction effects were more pronounced with drier soils. Our results indicate that simplistic models cannot consistently predict the timing of slope failure, and that high frequency monitoring (with sampling periods < 60 s) is needed to measure and interpret the effects of rapid hydrologic triggers.

Postseismic Deformation: Different mechanisms in different times and places.

NASA Astrophysics Data System (ADS)

Segall, P.

2004-12-01

Improved understanding of postseismic deformation may elucidate time dependent stress transfer and triggered seismicity following large earthquakes. Afterslip, distributed viscoelastic flow, and poroelastic relaxation alter crustal stress and pore pressure distributions and in many cases lead to distinctive surface deformation patterns. Delayed triggering, due to rate and state dependent friction, on the other hand need not lead to detectable surface deformation. Postseismic deformation recorded following the 1999 ChiChi, Taiwan, 2003 Tokachi-Oki, Japan, and 2000 south Iceland earthquakes can be used to test for the effects of these processes. Horizontal displacements of 10 cm accumulated in the first year following the Chi-Chi quake. These are best explained with continued slip on the Chelungpu fault (Hsu et al, G.R.L. 2002). Inversions indicate the afterslip was roughly localized in a ring around the locus of maximum coseismic slip. The observed displacement pattern is inconsistent with predictions from viscoelastic and poroelastic models. Viscoelastic relaxation of the lower crust produces shortening of the hanging wall instead of the observed extension. The fully drained poroelastic response predicts deformation concentrated near the fault ends, which was not observed. Fully time dependent calculations, however, are still required because poroelastic displacements need not be monotonic. Afterslip following the M 8 Tokachi Oki earthquake is also localized around the area of high mainshock slip (Miyazaki et al, GRL, 2004). Surprisingly, the slip is not located downdip of the mainshock, but along strike of the source region. This indicates that the transient deformation is not caused by deceleration of the earthquake instability, but rather by stress increases due to the mainshock. A major question is whether intermediate depth afterslip following the Tokachi Oki and ChiChi earthquakes occurs in stable (steady state velocity strengthening) areas which will never initiate fast earthquake slip, or on unstable (velocity weakening) parts of the fault that slipped in a stable fashion following the earthquakes due to the pre-earthquake fault state and stress. Resolution of this question has important implications for future earthquakes in these areas. Postseismic deformation in the month following the South Iceland earthquakes was clearly detected by InSAR. The spatial and temporal patterns are inconsistent with both afterslip and viscoelastic deformation. The InSAR data are, however, well explained by a rapid poroelastic response. This was confirmed by water level changes with the same spatial and temporal scales as the deformation (Jónsson et al, Nature, 2003). The decay of aftershocks is substantially longer that the poroelastic relaxation, suggesting that poroelastic effects do not control the timing of triggered earthquakes. The InsAR data, however, are insensitive to pore pressure changes at the depths of most aftershocks. At longer time scales, other processes dominate the observed deformation (Arnadottir, this meeting). An inescapable conclusion of these studies is that different physical processes dominate postseismic deformation in different geologic environments at different time scales.

Effect of deformation ratios on grain alignment and magnetic properties of hot pressing/hot deformation Nd-Fe-B magnets

NASA Astrophysics Data System (ADS)

Guo, Zhaohui; Li, Mengyu; Wang, Junming; Jing, Zheng; Yue, Ming; Zhu, Minggang; Li, Wei

2018-05-01

The magnetic properties, microstructure and orientation degrees of hot pressing magnet and hot deformation Nd-Fe-B magnets with different deformation ratios have been investigated in this paper. The remanence (Br) and maximum magnetic energy product ((BH)max) were enhanced gradually with the deformation ratio increasing from 0% to 70%, whereas the coercivity (HCj) decreased. The scanning electron microscopy (SEM) images of fractured surfaces parallel to the pressure direction during hot deformation show that the grains tend to extend perpendicularly to the c-axes of Nd2Fe14B grains under the pressure, and the aspect ratios of the grains increase with the increase of deformation ratio. Besides, the compression stress induces the long axis of grains to rotate and the angle (θ) between c-axis and pressure direction decreases. The X-ray diffraction (XRD) patterns reveal that orientation degree improves with the increase of deformation ratio, agreeing well with the SEM results. The hot deformation magnet with a deformation ratio of 70% has the best Br and (BH)max, and the magnetic properties are as followed: Br=1.40 T, HCj=10.73 kOe, (BH)max=42.30 MGOe.

Plant diversity predicts beta but not alpha diversity of soil microbes across grasslands worldwide

USGS Publications Warehouse

Prober, Suzanne M.; Leff, Jonathan W.; Bates, Scott T.; Borer, Elizabeth T.; Firn, Jennifer; Harpole, W. Stanley; Lind, Eric M.; Seabloom, Eric W.; Adler, Peter B.; Bakker, Jonathan D.; Cleland, Elsa E.; DeCrappeo, Nicole; DeLorenze, Elizabeth; Hagenah, Nicole; Hautier, Yann; Hofmockel, Kirsten S.; Kirkman, Kevin P.; Knops, Johannes M. H.; La Pierre, Kimberly J.; MacDougall, Andrew S.; McCulley, Rebecca L.; Mitchell, Charles E.; Risch, Anita C.; Schuetz, Martin; Stevens, Carly J.; Williams, Ryan J.; Fierer, Noah

2015-01-01

Aboveground–belowground interactions exert critical controls on the composition and function of terrestrial ecosystems, yet the fundamental relationships between plant diversity and soil microbial diversity remain elusive. Theory predicts predominantly positive associations but tests within single sites have shown variable relationships, and associations between plant and microbial diversity across broad spatial scales remain largely unexplored. We compared the diversity of plant, bacterial, archaeal and fungal communities in one hundred and forty-five 1 m2 plots across 25 temperate grassland sites from four continents. Across sites, the plant alpha diversity patterns were poorly related to those observed for any soil microbial group. However, plant beta diversity (compositional dissimilarity between sites) was significantly correlated with the beta diversity of bacterial and fungal communities, even after controlling for environmental factors. Thus, across a global range of temperate grasslands, plant diversity can predict patterns in the composition of soil microbial communities, but not patterns in alpha diversity.

Inherited crustal deformation along the East Gondwana margin revealed by seismic anisotropy tomography

NASA Astrophysics Data System (ADS)

Pilia, S.; Arroucau, P.; Rawlinson, N.; Reading, A. M.; Cayley, R. A.

2016-12-01

The mechanisms of continental growth are a crucial part of plate tectonic theory, yet a clear understanding of the processes involved remains elusive. Here we determine seismic Rayleigh wave phase anisotropy variations in the crust beneath the southern Tasmanides of Australia, a Paleozoic accretionary margin. Our results reveal a complex, thick-skinned pervasive deformation that was driven by the tectonic interaction between the proto-Pacific Ocean and the ancient eastern margin of Gondwana. Stress-induced effects triggered by the collision and entrainment of a microcontinent into the active subduction zone are evident in the anisotropy signature. The paleofracturing trend of failed rifting between Australia and Antarctica is also recorded in the anisotropy pattern as well as a tightly curved feature in central Tasmania. The observed patterns of anisotropy correlate well with recent geodynamic and kinematic models of the Tasmanides and provide a platform from which the spatial extent of deformational domains can be refined.

Fractures on Europa - Possible response of an ice crust to tidal deformation

NASA Technical Reports Server (NTRS)

Helfenstein, P.; Parmentier, E. M.

1980-01-01

The surface of Europa contains a planetwide system of low albedo lineaments which have been interpreted as fractures in an icy crust. The pattern of fractures on the surface consists of radial and concentric fractures having the general appearance of tension cracks within a region near the antipode of the sub-Jupiter point. Outside this region, linear fractures intersect at angles near 60 deg, suggesting that they are conjugate shear fractures. The orientation of this pattern on the surface suggests that a principal axis of the deformation that produced the fractures was approximately radial to Jupiter. Fracturing may thus be consistent with an origin due to cyclical tidal deformation resulting from orbital eccentricity. Orbital eccentricity related to a relatively recent establishment of orbital resonance among the Galilean satellites may explain the presence of fractures in a relatively young, lightly cratered planetary surface.

Taxonomic and nontaxonomic responses to ecological changes in an urban lowland stream through the use of Chironomidae (Diptera) larvae.

PubMed

Cortelezzi, A; Paggi, A C; Rodríguez, M; Capítulo, A Rodrigues

2011-03-01

Biotic descriptors--both taxonomic (diversity indices, species richness, and indicator species) and nontaxonomic (biomass, oxygen consumption/production, and anatomical deformities)--are useful tools for measuring a stream's ecological condition. Nontaxonomic parameters detect critical effects not reflected taxonomically. We analyzed changes in Chironomidae populations as taxonomic parameters and mentum deformities as a nontaxonomic parameter for evaluating a South-American-plains stream (Argentina). We performed samplings seasonally (March, June, September, and December; 2005) and physical and chemical measurements at three sampling sites of the stream (DC1 at river source, through DC3 downstream). The specimens collected in sediment and vegetation were analyzed to investigate mouth deformities in Chironomidae larvae. We identified a total of 9 taxa from Chironomidae and Orthocladiinae subfamilies. Shannon's diversity index for Chironomidae decreased from 1.6 bits ind⁻¹ (DC1) to 0.3 bits ind⁻¹ (DC3). The total density of the Chironomidae exhibited a great increase in abundance at site DC3, especially that of Chironomus calligraphus. Chironomidae taxonomic composition also changed among the three sites despite their spatial proximity: C. calligraphus, Goeldichironomus holoprasinus, Parachironomus longistilus, and Polypedilum were present at all three; Corynoneura and Paratanytarsu at DC1 only; Cricotopus at DC1 and DC3; Apedilum elachistus notably at DC2 and DC3; and Parametriocnemus only at DC2. C. calligraphus individuals from DC1 showed no mentum deformities; only 2 from DC2 exhibited mouth-structure alterations; while specimens from DC3 presented the most abnormalities, especially during autumn and late winter. Type-II deformities (supernumerary teeth and gaps) were the most common. Anatomical deformities are sublethal effects representing an early alert to chemically caused environmental degradation. Mentum deformities in benthic-Chironomidae larvae constitute an effective biological-surveillance tool for detecting adverse conditions in sediments and evaluating sediment-quality-criteria compliance. Taxonomic (community composition) and nontaxonomic (condition of larval mouth parts) descriptors, used together, can indicate a stream's ecological state. Copyright © 2011 Elsevier B.V. All rights reserved.

Is there a relationship between preferred posture and positioning in early life and the direction of subsequent asymmetrical postural deformity in non ambulant people with cerebral palsy?

PubMed

Porter, David; Michael, Shona; Kirkwood, Craig

2008-09-01

It has been suggested that asymmetrical positioning of an infant with reduced mobility may lead to postural deformity becoming established over time. However, evidence to support or question this line of thinking is lacking. Therefore, the aim of this retrospective cohort study was to test the association between asymmetrical positioning in the first 12 months of life and the subsequent direction of postural deformity in non-ambulant people with cerebral palsy. The direction of scoliosis, pelvic obliquity and windswept hip pattern and also the side of unilateral hip subluxation/dislocation were determined for 246 young people ranging in age from 1 year and 2 months to 19 years (median age 10 years and 3 months). Parents/carers of the participants were interviewed to establish holding and feeding positions and preferred lying posture adopted in early life. Univariate analyses and multivariate logistic regression analyses were carried out. The study provided evidence of an association between asymmetrical lying posture adopted in the first year of life and the direction of the subsequent pattern of postural deformity. If the child's head had been rotated to the right during supine lying, it was more likely that the scoliosis would be convex to the left, pelvic obliquity would be lower on the left, windswept hip pattern would be to the right and hip subluxation/dislocation would occur on the left. The likelihood of the deformities occurring in the same direction was also increased if consistent side lying on the right had been preferred. Clinicians should be aware of positioning for children with severe disabilities particularly those who prefer supine lying with their head rotated to the side and those who prefer consistent side lying.

Shadow casted by a Konoplya-Zhidenko rotating non-Kerr black hole

DOE Office of Scientific and Technical Information (OSTI.GOV)

Wang, Mingzhi; Chen, Songbai; Jing, Jiliang, E-mail: wmz9085@126.com, E-mail: csb3752@hunnu.edu.cn, E-mail: jljing@hunnu.edu.cn

We have investigated the shadow of a Konoplya-Zhidenko rotating non-Kerr black hole with an extra deformation parameter. The spacetime structure arising from the deformed parameter affects sharply the black hole shadow. With the increase of the deformation parameter, the size of the shadow of black hole increase and its shape becomes more rounded for arbitrary rotation parameter. The D-shape shadow of black hole emerges only in the case a <2√3/3\\, M with the proper deformation parameter. Especially, the black hole shadow possesses a cusp shape with small eye lashes in the cases with a >M, and the shadow becomes lessmore » cuspidal with the increase of the deformation parameter. Our result show that the presence of the deformation parameter yields a series of significant patterns for the shadow casted by a Konoplya-Zhidenko rotating non-Kerr black hole.« less

Modern and Interglacial Marine Ostracode Species Diversity Patterns off Eastern North America

NASA Astrophysics Data System (ADS)

Chiu, W. T. R.; Yasuhara, M.; Cronin, T. M.; Hunt, G.; Gemery, L.

2016-02-01

Latitudinal species diversity gradients (LSDGs) are a major feature of various marine groups. However, the detailed shape of LSDG in each marine taxonomic group and the causes of the diversity patterns, notably climatic factors, are still controversial due to limited sampling of many taxa in the world's oceans. We analyzed benthic podocopid ostracode faunal assemblages on the continental shelf regions from Arctic to tropical regions off eastern North America to determine biodiversity patterns and their relationships to oceanographic conditions (temperature, productivity, etc). Our database consists of 200 ostracode species from more than 100 bottom sediment samples. Preliminary results suggest that biodiversity, as measured using simple diversity (S), rarefaction, Shannon and α-Fisher indices, show strong latitudinal diversity gradients in which diversity is 2 to 3 times higher in tropical and subtropical regions that in northern high latitude areas. These modern ostracode diversity patterns will be compared with those from past interglacial periods of global warmth during the Pliocene and Pleistocene to assess the impact of warmer-than- present climate conditions on diversity.

Evolution of genomic diversity and sex at extreme environments: Fungal life under hypersaline Dead Sea stress

PubMed Central

Kis-Papo, Tamar; Kirzhner, Valery; Wasser, Solomon P.; Nevo, Eviatar

2003-01-01

We have found that genomic diversity is generally positively correlated with abiotic and biotic stress levels (1–3). However, beyond a high-threshold level of stress, the diversity declines to a few adapted genotypes. The Dead Sea is the harshest planetary hypersaline environment (340 g·liter–1 total dissolved salts, ≈10 times sea water). Hence, the Dead Sea is an excellent natural laboratory for testing the “rise and fall” pattern of genetic diversity with stress proposed in this article. Here, we examined genomic diversity of the ascomycete fungus Aspergillus versicolor from saline, nonsaline, and hypersaline Dead Sea environments. We screened the coding and noncoding genomes of A. versicolor isolates by using >600 AFLP (amplified fragment length polymorphism) markers (equal to loci). Genomic diversity was positively correlated with stress, culminating in the Dead Sea surface but dropped drastically in 50- to 280-m-deep seawater. The genomic diversity pattern paralleled the pattern of sexual reproduction of fungal species across the same southward gradient of increasing stress in Israel. This parallel may suggest that diversity and sex are intertwined intimately according to the rise and fall pattern and adaptively selected by natural selection in fungal genome evolution. Future large-scale verification in micromycetes will define further the trajectories of diversity and sex in the rise and fall pattern. PMID:14645702

Simultaneous multiscale measurements on dynamic deformation of a magnesium alloy with synchrotron x-ray imaging and diffraction

DOE Office of Scientific and Technical Information (OSTI.GOV)

Lu, L.; Sun, T.; Fezzaa, K.

Dynamic split Hopkinson pressure bar experiments with in situ synchrotron x-ray imaging and diffraction are conducted on a rolled magnesium alloy at high strain rates of ~5500 s-1. High speed multiscale measurements including stress–strain curves (macroscale), strain fields (mesoscale), and diffraction patterns (microscale) are obtained simultaneously, revealing strong anisotropy in deformation across different length scales. {1012} extension twinning induces homogenized strain fields and gives rise to rapid increase in strain hardening rate, while dislocation motion leads to inhomogeneous deformation and a decrease in strain hardening rate. During the early stage of plastic deformation, twinning is dominant in dynamic compression, whilemore » dislocation motion prevails in quasi-static loading, manifesting a strain-rate dependence of deformation.« less

Anisotropic Ripple Deformation in Phosphorene.

PubMed

Kou, Liangzhi; Ma, Yandong; Smith, Sean C; Chen, Changfeng

2015-05-07

Two-dimensional materials tend to become crumpled according to the Mermin-Wagner theorem, and the resulting ripple deformation may significantly influence electronic properties as observed in graphene and MoS2. Here, we unveil by first-principles calculations a new, highly anisotropic ripple pattern in phosphorene, a monolayer black phosphorus, where compression-induced ripple deformation occurs only along the zigzag direction in the strain range up to 10%, but not the armchair direction. This direction-selective ripple deformation mode in phosphorene stems from its puckered structure with coupled hinge-like bonding configurations and the resulting anisotropic Poisson ratio. We also construct an analytical model using classical elasticity theory for ripple deformation in phosphorene under arbitrary strain. The present results offer new insights into the mechanisms governing the structural and electronic properties of phosphorene crucial to its device applications.

Subduction zone locking, strain partitioning, intraplate deformation and their implications to Seismic Hazards in South America

NASA Astrophysics Data System (ADS)

Galgana, G. A.; Mahdyiar, M.; Shen-Tu, B.; Pontbriand, C. W.; Klein, E.; Wang, F.; Shabestari, K.; Yang, W.

2014-12-01

We analyze active crustal deformation in South America (SA) using published GPS observations and historic seismicity along the Nazca Trench and the active Ecuador-Colombia-Venezuela Plate boundary Zone. GPS-constrained kinematisc models that incorporate block and continuum techniques are used to assess patterns of regional tectonic deformation and its implications to seismic potential. We determine interplate coupling distributions, fault slip-rates, and intraplate crustal strain rates in combination with historic earthquakes within 40 seismic zones crust to provide moment rate constraints. Along the Nazca subduction zone, we resolve a series of highly coupled patches, interpreted as high-friction producing "asperities" beneath the coasts of Ecuador, Peru and Chile. These include areas responsible for the 2010 Mw 8.8 Maule Earthquake and the 2014 Mw 8.2 Iquique Earthquake. Predicted tectonic block motions and fault slip rates reveal that the northern part of South America deforms rapidly, with crustal fault slip rates as much as ~20 mm/a. Fault slip and locking patterns reveal that the Oca Ancón-Pilar-Boconó fault system plays a key role in absorbing most of the complex eastward and southward convergence patterns in northeastern Colombia and Venezuela, while the near-parallel system of faults in eastern Colombia and Ecuador absorb part of the transpressional motion due to the ~55 mm/a Nazca-SA plate convergence. These kinematic models, in combination with historic seismicity rates, provide moment deficit rates that reveal regions with high seismic potential, such as coastal Ecuador, Bucaramanga, Arica and Antofagasta. We eventually use the combined information from moment rates and fault coupling patterns to further constrain stochastic seismic hazard models of the region by implementing realistic trench rupture scenarios (see Mahdyiar et al., this volume).

Biotite percussion figures in naturally deformed mylonites

NASA Astrophysics Data System (ADS)

Xu, Shutong; Ji, Shouyuan

1991-05-01

Under experimental conditions, characteristic fracture patterns can be produced on cleavage plates on mica by using a blunt tool. If stress is applied rapidly by striking the surface in a controlled way, a pattern known as the "percussion figure" is produced. When the stress is applied by steady pressure on the tool, a different but complementary pattern of fracture is formed. In sum, these induced fractures constitute the "pressure figure". The orientation of each of these two sets of fractures with respect to the optical axial plane (OAP) of mica is different and therefore diagnostic of the manner in which they are produced. These patterns are distinct from those formed as a result of exsolution of Fe-Ti oxides which are commonly visible in sections of biotite cut parallel to the basal plane (001). A description is given of percussion figures produced by natural deformation in biotites from mylonite belts cutting the Proterozoic metasediments of the Feidong Group in eastern Anhui Province and another from Yunnan Province, China. The principal fracture of the natural percussion figure evidently is parallel to the (OAP) of the biotite and the other two sets are quite distinct as well, thus identifying it really as a percussion figure. Microscopic inclusions of sphene also are located along the crystallographically controlled fracture planes of the percussion figures. The data indicate that high strain rates would be required to form these natural percussion figures and that a special history of deformation must have affected the mylonites in which they occur. It is proposed that the homogeneous deformation of the mylonite in a ductile regime was complicated by strain hardening which led to episodes of abrupt stress itself relief (stick-slip) at rates of strain high enough to induce the formation of percussion figures in the biotites.

Joint Interpretation of Insar and GPS Data Related To The Eruptive Event of July 2001 At Mt. Etna

NASA Astrophysics Data System (ADS)

Ferretti, A.; Colesanti, C.; Basilico, M.; Locatelli, R.; Novali, F.; Bonforte, A.; Coltelli, M.; Guglielmino, F.; Palano, M.; Puglisi, G.

The eruptive background of the July 2001 eruption at Mt. Etna, proved extremely complex and dynamic from the very beginning. The development of the ground defor- mation pattern due to the eruptive event was monitored through both GPS continuous measurements on network of permanent and static stations, and daily measurements both static and kinematic GPS, made by INGV-CT on geodetic network. These mea- surements show diffuse and intense ground deformations on large part of volcanic area. After the ERS-2 gyroscope problems in January 2001, the attitude accuracy of the platform was compromised due to the variability of the baseline and Doppler cen- troid values. Since January, a dedicated and passionate ESA team started a complex recovery procedure aimed at improving the satellite stability. The results obtained are extremely promising. In fact, POLIMI team, in cooperation with TRE (POLIMI com- mercial spin-off), was able to obtain, albeit with a very simple ad hoc processing, a clear surface deformation map related to the 11 July-15 August 2001 passages. Fur- ther work, after this preliminary interferogram, could be carried out to unwrap the very crowded fringe pattern on the top of the volcano. A preliminary analysis of the differential product shows an extremely interesting pattern that will appear associated to a decimetres ground deformation at the summit area of the volcano and at the Valle del Bove area. The GPS data and the preliminary results of SAR interferogram are in agreement with the deformation pattern expected in such kind of event, where the displacements are caused by deep magmatic sources and locally modulated by major structural features.

Wind and ecosystem response at the GLEES

Treesearch

Robert C. Musselman; Gene L. Wooldridge; William J. Massman; Richard A. Sommerfeld

1995-01-01

Research was conducted to determine wind patterns and snow deposition at a high elevation alpine/subalpine ecotone site using deformation response of trees to prevailing winds. The research has provided detailed maps of wind speed, wind direction, and snow depth as determined from tree deformation. The effects of prevailing wind on tree blowdown at the site have also...

Optimisation and Validation of the ARAMIS Digital Image Correlation System for Use in Large-scale High-strain-rate Events

DTIC Science & Technology

2013-08-01

enamel paint. Under extreme plastic deformation, the relative deformation of the coating could cause the coating to separate resulting in loss of...point for one to be found. If a discontinuity, such as a crack , occurs through the object separating speckle pattern, then the strain data will only

Segmentation of the pectoral muscle in breast MR images using structure tensor and deformable model

NASA Astrophysics Data System (ADS)

Lee, Myungeun; Kim, Jong Hyo

2012-02-01

Recently, breast MR images have been used in wider clinical area including diagnosis, treatment planning, and treatment response evaluation, which requests quantitative analysis and breast tissue segmentation. Although several methods have been proposed for segmenting MR images, segmenting out breast tissues robustly from surrounding structures in a wide range of anatomical diversity still remains challenging. Therefore, in this paper, we propose a practical and general-purpose approach for segmenting the pectoral muscle boundary based on the structure tensor and deformable model. The segmentation work flow comprises four key steps: preprocessing, detection of the region of interest (ROI) within the breast region, segmenting the pectoral muscle and finally extracting and refining the pectoral muscle boundary. From experimental results we show that the proposed method can segment the pectoral muscle robustly in diverse patient cases. In addition, the proposed method will allow the application of the quantification research for various breast images.

Tunable deformation modes shape contractility in active biopolymer networks

NASA Astrophysics Data System (ADS)

Stam, Samantha; Banerjee, Shiladitya; Weirich, Kim; Freedman, Simon; Dinner, Aaron; Gardel, Margaret

Biological polymer-based materials remodel under active, molecular motor-driven forces to perform diverse physiological roles, such as force transmission and spatial self-organization. Critical to understanding these biomaterials is elucidating the role of microscopic polymer deformations, such as stretching, bending, buckling, and relative sliding, on material remodeling. Here, we report that the shape of motor-driven deformations can be used to identify microscopic deformation modes and determine how they propagate to longer length scales. In cross-linked actin networks with sufficiently low densities of the motor protein myosin II, microscopic network deformations are predominantly uniaxial, or dominated by sliding. However, longer-wavelength modes are mostly biaxial, or dominated by bending and buckling, indicating that deformations with uniaxial shapes do not propagate across length scales significantly larger than that of individual polymers. As the density of myosin II is increased, biaxial modes dominate on all length scales we examine due to buildup of sufficient stress to produce smaller-wavelength buckling. In contrast, when we construct networks from unipolar, rigid actin bundles, we observe uniaxial, sliding-based contractions on 1 to 100 μm length scales. Our results demonstrate the biopolymer mechanics can be used to tune deformation modes which, in turn, control shape changes in active materials.

The distribution of deformation in parallel fault-related folds with migrating axial surfaces: comparison between fault-propagation and fault-bend folding

NASA Astrophysics Data System (ADS)

Salvini, Francesco; Storti, Fabrizio

2001-01-01

In fault-related folds that form by axial surface migration, rocks undergo deformation as they pass through axial surfaces. The distribution and intensity of deformation in these structures has been impacted by the history of axial surface migration. Upon fold initiation, unique dip panels develop, each with a characteristic deformation intensity, depending on their history. During fold growth, rocks that pass through axial surfaces are transported between dip panels and accumulate additional deformation. By tracking the pattern of axial surface migration in model folds, we predict the distribution of relative deformation intensity in simple-step, parallel fault-bend and fault-propagation anticlines. In both cases the deformation is partitioned into unique domains we call deformation panels. For a given rheology of the folded multilayer, deformation intensity will be homogeneously distributed in each deformation panel. Fold limbs are always deformed. The flat crests of fault-propagation anticlines are always undeformed. Two asymmetric deformation panels develop in fault-propagation folds above ramp angles exceeding 29°. For lower ramp angles, an additional, more intensely-deformed panel develops at the transition between the crest and the forelimb. Deformation in the flat crests of fault-bend anticlines occurs when fault displacement exceeds the length of the footwall ramp, but is never found immediately hinterland of the crest to forelimb transition. In environments dominated by brittle deformation, our models may serve as a first-order approximation of the distribution of fractures in fault-related folds.

Psychological and Demographic Correlates of Career Patterns

ERIC Educational Resources Information Center

Reitzle, Matthias; Korner, Astrid; Vondracek, Fred W.

2009-01-01

Recent years have witnessed a growing diversity of career patterns, resulting from the relative decline of stable employment. In the present study of 1368 employed and self-employed German adults career pattern diversity was assessed using nine pictograms. The goal was to identify psychological and demographic correlates of these patterns and to…

Deformation and evolution of an experimental drainage network subjected to oblique deformation: Insight from chi-maps

NASA Astrophysics Data System (ADS)

Guerit, Laure; Goren, Liran; Dominguez, Stéphane; Malavieille, Jacques; Castelltort, Sébastien

2017-04-01

The morphology of a fluvial landscape reflects a balance between its own dynamics and external forcings, and therefore holds the potential to reveal local or large-scale tectonic patterns. Commonly, particular focus has been cast on the longitudinal profiles of rivers as they constitute sensitive recorders of vertical movements, that can be recovered based on models of bedrock incision. However, several recent studies have suggested that maps of rescaled distance along channel called chi (χ), derived from the commonly observed power law relation between the slope and the drainage area , could reveal transient landscapes in state of reorganization of basin geometry and location of water divides. If river networks deforms in response to large amount of distributed strain, then they might be used to reconstruct the mode and rate of horizontal deformation away from major active structures through the use of the parameter χ. To explore how streams respond to tectonic horizontal deformation, we develop an experimental model for studying river pattern evolution over a doubly-vergent orogenic wedge growing in a context of oblique convergence. We use a series of sprinklers located about the experimental table to activate erosion, sediment transport and river development on the surface of the experimental wedge. At the end of the experiment, the drainage network is statistically rotated clockwise, confirming that rivers can record the distribution of motion along the wedge. However, the amount of rotation does not match with the imposed deformation, and thus we infer that stream networks are not purely passive markers. Based on the comparison between the observed evolution of the fluvial system and the predictions made from χ maps, we show that the plan-view morphology of the streams results from the competition between the imposed deformation and fluvial processes of drainage reorganization.

Observations of Quasi-Love Waves in Tibet Indicates Coherent Deformation of the Crust and Upper Mantle

NASA Astrophysics Data System (ADS)

Chen, X.; Park, J. J.

2012-12-01

The high uplift of the Tibet area is caused by the continental collision between the Indian plate and the Eurasian plate. The style of deformation along with the collision is still being debated, particularly whether the deformation is vertically coherent or not, i.e., whether the upper mantle deforms coherently with the crust. In this work, we have used quasi-Love (QL) waves to constrain the anisotropy pattern around the Tibet region. The existence of anisotropy gradients has been identified with the observations of QL waves, which is a converted Rayleigh-wave motion that follows the arrival of the Love wave. Further, the locations of the anisotropy gradients have been pinned with the delay time between the Love wave and the QL wave, which is determined from cross-correlation. Our results show that the frequency content of Tibetan QL wave is centered around 10 mHz, indicating the depth range of anisotropy should be in the asthenosphere. Most of the scatterers of QL wave that we can detect lie outside the Tibet Plateau. Their distribution correlates well with the boundary of the Persia-Tibet- Burma orogeny, which has been identified from surface geologic data. This correlation, between surface geology and upper mantle anisotropy inferred from QL observations at the orogenic boundary, suggests that the crust and upper mantle of the orogeny are deforming coherently. Other scatterers that are off the Persia-Tibet-Burma orogenic boundary mostly cluster in two locations, the Tarim Basin, and the Bangong-Nujiang Suture, where there could exist contrasting anisotropy patterns in the upper mantle. The deformation in the Tibet region is complicated, yet our research suggests a vertically coherent deformation style of the upper mantle in Tibet.

Pre-eruptive ground deformation of Azerbaijan mud volcanoes detected through satellite radar interferometry (DInSAR)

NASA Astrophysics Data System (ADS)

Antonielli, Benedetta; Monserrat, Oriol; Bonini, Marco; Righini, Gaia; Sani, Federico; Luzi, Guido; Feyzullayev, Akper A.; Aliyev, Chingiz S.

2014-12-01

Mud volcanism is a process that leads to the extrusion of subsurface mud, fragments of country rocks, saline waters and gases. This mechanism is typically linked to hydrocarbon traps, and the extrusion of this material builds up a variety of conical edifices with a similar morphology to those of magmatic volcanoes, though smaller in size. The Differential Interferometry Synthetic Aperture Radar (DInSAR) technique has been used to investigate the ground deformation related to the activity of the mud volcanoes of Azerbaijan. The analysis of a set of wrapped and unwrapped interferograms, selected according to their coherence, allowed the detection of significant superficial deformation related to the activity of four mud volcanoes. The ground displacement patterns observed during the period spanning from October 2003 to November 2005 are dominated by uplift, which reach a cumulative value of up to 20 and 10 cm at the Ayaz-Akhtarma and Khara-Zira Island mud volcanoes, respectively. However, some sectors of the mud volcano edifices are affected by subsidence, which might correspond to deflation zones that coexist with the inflation zones characterized by the dominant uplift. Important deformation events, caused by fluid pressure and volume variations, have been observed both (1) in connection with main eruptive events in the form of pre-eruptive uplift, and (2) in the form of short-lived deformation pulses that interrupt a period of quiescence. Both deformation patterns show important similarities to those identified in some magmatic systems. The pre-eruptive uplift has been observed in many magmatic volcanoes as a consequence of magma intrusion or hydrothermal fluid injection. Moreover, discrete short-duration pulses of deformation are also experienced by magmatic volcanoes and are repeated over time as multiple inflation and deflation events.

Mechanics of hard films on soft substrates

NASA Astrophysics Data System (ADS)

Lu, Nanshu

2009-12-01

Flexible electronics have been developed for various applications, including paper-like electronic readers, rollable solar cells, electronic skins etc., with the merits of light weight, low cost, large area, and ruggedness. The systems may be subject to one-time or repeated large deformation during manufacturing and application. Although organic materials can be highly deformable, currently they are not able to fulfill every electronic function. Therefore flexible electronic devices are usually made as organic/inorganic hybrids, with diverse materials, complex architecture, and micro features. While the polymer substrates can recover from large deformations, thin films of electronic materials such as metals, silicon, oxides, and nitrides fracture at small strains, usually less than a few percent. Mechanics of hard films on soft substrates hence holds the key to build high-performance and highly reliable flex circuits. This thesis investigates the deformability and failure mechanisms of thin films of metallic and ceramic materials supported by soft polymeric substrates through combined experimental, theoretical, and numerical methods. When subject to tension, micron-thick metal films with stable microstructure and strong interfacial adhesion to the substrate can be stretched beyond 50% without forming cracks. They eventually rupture by a ductile transgranular fracture which involves simultaneous necking and debonding. When metal films become nanometer-thick, intergranular fracture dominates the failure mode at elongations of only a few percent. Unannealed films show unstable microstructure at room temperature when subject to mechanical loading. In this case, films also rupture at small strains but by three concurrent mechanisms: deformation-induced grain growth, strain localization at large grains, and simultaneous debonding. In contrast to metal films, ceramic films rupture by brittle mechanisms. The only way to prevent rupture of ceramic films is to reduce the strain they are subject to. Instead of using blanket films that fail at strains less than i%, we have patterned ceramic films into a lattice of periodic, isolated islands. Failure modes such as channel cracking, debonding, and wrinkling have been identified. Island behaviors are controlled by factors such as island size, thickness, and elastic mismatch with the substrate. A very soft interlayer between the islands and the underlying polyimide substrate reduces strains in the islands by orders of magnitude. Using this approach, substrates with arrays of 200 x 200 mum2 large SiNx islands were stretched beyond 20% without cracking or debonding the islands. In summary, highly stretchable thin metal films and ceramic island arrays supported by polymer substrates have been achieved, along with mechanistic understandings of their deformation and failure mechanisms.

Multiple Spatial Coherence Resonances and Spatial Patterns in a Noise-Driven Heterogeneous Neuronal Network

NASA Astrophysics Data System (ADS)

Li, Yu-Ye; Ding, Xue-Li

2014-12-01

Heterogeneity of the neurons and noise are inevitable in the real neuronal network. In this paper, Gaussian white noise induced spatial patterns including spiral waves and multiple spatial coherence resonances are studied in a network composed of Morris—Lecar neurons with heterogeneity characterized by parameter diversity. The relationship between the resonances and the transitions between ordered spiral waves and disordered spatial patterns are achieved. When parameter diversity is introduced, the maxima of multiple resonances increases first, and then decreases as diversity strength increases, which implies that the coherence degrees induced by noise are enhanced at an intermediate diversity strength. The synchronization degree of spatial patterns including ordered spiral waves and disordered patterns is identified to be a very low level. The results suggest that the nervous system can profit from both heterogeneity and noise, and the multiple spatial coherence resonances are achieved via the emergency of spiral waves instead of synchronization patterns.

Analogue Models Of Volcanic Spreading At Mt. Vesuvius

NASA Astrophysics Data System (ADS)

De Matteo, Ada; Castaldo, Raffaele; D'Auria, Luca; James, Michael; Lane, Steve; Massa, Bruno; Pepe, Susi; Tizzani, Pietro

2015-04-01

Somma-Vesuvius is a quiescent strato-volcano of the Neapolitan district, southern Italy, for which various geophysical and geological evidences (e.g. geodetic measurements, geological and structural data, seismic profiles interpretations and surface deformation analysis with Differential Interferometric Synthetic Aperture Radar (DInSAR)) indicate ongoing spreading deformation. In this research we investigate the spreading deformation and associated surface deformation pattern by performing analogue experiments and comparing the results with actual ground deformation as measured using DInSAR data recorded between 1992 and 2010. Somma-Vesuvius consists of a volcanic cone (Gran Cono) lying within an asymmetric caldera (Somma). The Somma caldera is the result of at least 7 Plinian eruptions, the last of which was the 79 CE. Pompeii eruption. The current cone of Mt. Vesuvius grew within the caldera in the following centuries as the effect of continued explosive and effusive activity of the volcano. The volcano lies on a substratum consisting of a Mesozoic carbonatic basement, overlapped by Holocene clastic sediments and volcanic rocks. Our analogue models were built to simulate the shape of the Somma-Vesuvius top a scale of about 1:100000, emplaced on a sand layer (brittle behaviour) laid on a silicone layer (ductile behaviour). Models are based on the Fluid-dynamics Dimensionless Analysis (FDA), according to the Buckingham-Π theorem. In this context, we considered few dimensionless parameters that allowed the setting of a reliable scaled model. To represent the complex Somma-Vesuvius geometry, an asymmetric model was built by setting a truncated cone (mimicking the topography of Somma edifice) topped by another small cone (mimicking the Gran Cono) shifted off the axis of the main cone. Different experiments were carried out in which the thickness of the basal sand layer and of the silicone one were varied. To quantify the vertical and horizontal displacements the models were monitored with three synchronised digital cameras, enabling sequential 3-D models to be derived using a photogrammetric technique. Finally, our models were compared with the 1992 - 2010 SBAS DInSAR measurements of ground deformations obtained using ERS-ENVISAT satellite images. The results show that analogue models are able to reproduce different styles of volcanic spreading and to reproduce the observed surface and deformation pattern. At the end our models show a deformation rather similar to the actual deformation pattern of the Somma-Vesuvius, both in the direction and in the intensity. Further studies will be devoted at find the best combination of parameters (silicone layer thickness and viscosity) to fit observations and to introduce a tridimensional rigid based topography. These studies will be implemented also with new structural and surface deformation (DinSAR) data and will be integrated with a numerical modelling.

ASSOCIATIONS BETWEEN GENETIC DIVERSITY AND ANTHROPOGENIC DISTURBANCE IN MIDWESTERN STREAM-DWELLING MINNOWS

EPA Science Inventory

Anthropogenic disturbances may leave imprints on patterns of intraspecific genetic diversity through their effects on population size, adaptation, migration, and mutation. We examined patterns of genetic diversity for a stream-dwelling minnow (the central stoneroller, Campostoma...

Mating patterns and pollinator mobility are critical traits in forest fragmentation genetics

PubMed Central

Breed, M F; Ottewell, K M; Gardner, M G; Marklund, M H K; Dormontt, E E; Lowe, A J

2015-01-01

Most woody plants are animal-pollinated, but the global problem of habitat fragmentation is changing the pollination dynamics. Consequently, the genetic diversity and fitness of the progeny of animal-pollinated woody plants sired in fragmented landscapes tend to decline due to shifts in plant-mating patterns (for example, reduced outcrossing rate, pollen diversity). However, the magnitude of this mating-pattern shift should theoretically be a function of pollinator mobility. We first test this hypothesis by exploring the mating patterns of three ecologically divergent eucalypts sampled across a habitat fragmentation gradient in southern Australia. We demonstrate increased selfing and decreased pollen diversity with increased fragmentation for two small-insect-pollinated eucalypts, but no such relationship for the mobile-bird-pollinated eucalypt. In a meta-analysis, we then show that fragmentation generally does increase selfing rates and decrease pollen diversity, and that more mobile pollinators tended to dampen these mating-pattern shifts. Together, our findings support the premise that variation in pollinator form contributes to the diversity of mating-pattern responses to habitat fragmentation. PMID:24002239

The genetic pattern of population threat and loss: a case study of butterflies.

PubMed

Schmitt, T; Hewitt, G M

2004-01-01

Recent decreases in biodiversity in Europe are commonly thought to be due to land use and climate change. However, the genetic diversity of populations is also seen as one essential factor for their fitness. Genetic diversity in species across the continent of Europe has been recognized as being in part a consequence of ice age isolation in southern refugia and postglacial colonization northwards, and these phylogeographical patterns may themselves affect the adaptability of populations. Recent work on butterfly species with different refugia, colonization paths and genetic structures allows this idea to be examined. The 'chalk-hill blue' pattern is one of decreasing genetic diversity from south to north, whereas the 'woodland ringlet' pattern shows greater genetic diversity in eastern than in western lineages. Comparison of population demographic trends in species with these biogeographical patterns reveals higher rates of decrease with lower genetic diversity. This indicates reduced adaptability due to genetic impoverishment as a result of glacial and postglacial range changes. Analysis of phylogeographical pattern may be a useful guide to interpreting demographic trends and in conservation planning.

Self-organization in a diversity induced thermodynamics.

PubMed

Scirè, Alessandro; Annovazzi-Lodi, Valerio

2017-01-01

In this work we show how global self-organized patterns can come out of a disordered ensemble of point oscillators, as a result of a deterministic, and not of a random, cooperative process. The resulting system dynamics has many characteristics of classical thermodynamics. To this end, a modified Kuramoto model is introduced, by including Euclidean degrees of freedom and particle polarity. The standard deviation of the frequency distribution is the disorder parameter, diversity, acting as temperature, which is both a source of motion and of disorder. For zero and low diversity, robust static phase-synchronized patterns (crystals) appear, and the problem reverts to a generic dissipative many-body problem. From small to moderate diversity crystals display vibrations followed by structure disintegration in a competition of smaller dynamic patterns, internally synchronized, each of which is capable to manage its internal diversity. In this process a huge variety of self-organized dynamic shapes is formed. Such patterns can be seen again as (more complex) oscillators, where the same description can be applied in turn, renormalizing the problem to a bigger scale, opening the possibility of pattern evolution. The interaction functions are kept local because our idea is to build a system able to produce global patterns when its constituents only interact at the bond scale. By further increasing the oscillator diversity, the dynamics becomes erratic, dynamic patterns show short lifetime, and finally disappear for high diversity. Results are neither qualitatively dependent on the specific choice of the interaction functions nor on the shape of the probability function assumed for the frequencies. The system shows a phase transition and a critical behaviour for a specific value of diversity.

Biogeographic patterns of soil diazotrophic communities across six forests in the North America.

PubMed

Tu, Qichao; Deng, Ye; Yan, Qingyun; Shen, Lina; Lin, Lu; He, Zhili; Wu, Liyou; Van Nostrand, Joy D; Buzzard, Vanessa; Michaletz, Sean T; Enquist, Brian J; Weiser, Michael D; Kaspari, Michael; Waide, Robert B; Brown, James H; Zhou, Jizhong

2016-06-01

Soil diazotrophs play important roles in ecosystem functioning by converting atmospheric N2 into biologically available ammonium. However, the diversity and distribution of soil diazotrophic communities in different forests and whether they follow biogeographic patterns similar to macroorganisms still remain unclear. By sequencing nifH gene amplicons, we surveyed the diversity, structure and biogeographic patterns of soil diazotrophic communities across six North American forests (126 nested samples). Our results showed that each forest harboured markedly different soil diazotrophic communities and that these communities followed traditional biogeographic patterns similar to plant and animal communities, including the taxa-area relationship (TAR) and latitudinal diversity gradient. Significantly higher community diversity and lower microbial spatial turnover rates (i.e. z-values) were found for rainforests (~0.06) than temperate forests (~0.1). The gradient pattern of TARs and community diversity was strongly correlated (r(2)  > 0.5) with latitude, annual mean temperature, plant species richness and precipitation, and weakly correlated (r(2)  < 0.25) with pH and soil moisture. This study suggests that even microbial subcommunities (e.g. soil diazotrophs) follow general biogeographic patterns (e.g. TAR, latitudinal diversity gradient), and indicates that the metabolic theory of ecology and habitat heterogeneity may be the major underlying ecological mechanisms shaping the biogeographic patterns of soil diazotrophic communities. © 2016 John Wiley & Sons Ltd.

Study on dynamic deformation synchronized measurement technology of double-layer liquid surfaces

NASA Astrophysics Data System (ADS)

Tang, Huiying; Dong, Huimin; Liu, Zhanwei

2017-11-01

Accurate measurement of the dynamic deformation of double-layer liquid surfaces plays an important role in many fields, such as fluid mechanics, biomechanics, petrochemical industry and aerospace engineering. It is difficult to measure dynamic deformation of double-layer liquid surfaces synchronously for traditional methods. In this paper, a novel and effective method for full-field static and dynamic deformation measurement of double-layer liquid surfaces has been developed, that is wavefront distortion of double-wavelength transmission light with geometric phase analysis (GPA) method. Double wavelength lattice patterns used here are produced by two techniques, one is by double wavelength laser, and the other is by liquid crystal display (LCD). The techniques combine the characteristics such as high transparency, low reflectivity and fluidity of liquid. Two color lattice patterns produced by laser and LCD were adjusted at a certain angle through the tested double-layer liquid surfaces simultaneously. On the basis of the refractive indexes difference of two transmitted lights, the double-layer liquid surfaces were decoupled with GPA method. Combined with the derived relationship between phase variation of transmission-lattice patterns and out-of plane heights of two surfaces, as well as considering the height curves of the liquid level, the double-layer liquid surfaces can be reconstructed successfully. Compared with the traditional measurement method, the developed method not only has the common advantages of the optical measurement methods, such as high-precision, full-field and non-contact, but also simple, low cost and easy to set up.

The use of Electronic Speckle Pattern Interferometry (ESPI) in the crack propagation analysis of epoxy resins

NASA Astrophysics Data System (ADS)

Herbert, D. P.; Al-Hassani, A. H. M.; Richardson, M. O. W.

The ESPI (electronic speckle pattern interferometry) technique at high magnification levels is demonstrated to be of considerable value in interpreting the fracture behaviour of epoxy resins. The fracture toughness of powder coating system at different thicknesses has been measured using a TDCB (tapered double cantilever beam) technique and the deformation zone at the tip of the moving crack monitored. Initial indications are that a mechanistic changeover occurs at a critical bond (coating) thickness and that this is synonymous with the occurence of a fracture toughness maximum, which in turn is associated with a deformation zone of specific diameter.

Evolution of land mammal diversity in North America during the Cenozoic

NASA Technical Reports Server (NTRS)

Stucky, Richard K.

1990-01-01

The North American continental patterns of generic richness, extinction, and origination have been reexamined and analyzed in the context of alpha and beta species diversity. The major models of diversity are discussed as well as primary concepts and theories based on studies of living organisms. The adequacy of the fossil record is considered and patterns of genetic richness and species level diversity are outlined. Major shifts in mammalian community structures are reviewed and hypotheses are presented on diversity origin, regulation, and maintenance for the North American record. Results demonstrate a complex relationship between continental alpha and beta diversity characterized by marked changes through time and differences in patterns at each level. It is clear that both biotic and abiotic factors have strongly influenced the evolution of North American species diversity and that major restructuring occurred in Cenozoic mammalian communities.

Stress history and fracture pattern in fault-related folds based on limit analysis: application to the Sub-Andean thrust belt of Bolivia

NASA Astrophysics Data System (ADS)

Barbe, Charlotte; Leroy, Yves; Ben Miloud, Camille

2017-04-01

A methodology is proposed to construct the stress history of a complex fault-related fold in which the deformation mechanisms are essentially frictional. To illustrate the approach, fours steps of the deformation of an initially horizontally layered sand/silicone laboratory experiment (Driehaus et al., J. of Struc. Geol., 65, 2014) are analysed with the kinematic approach of limit analysis (LA). The stress, conjugate to the virtual velocity gradient in the sense of mechanicam power, is a proxy for the true statically admmissible stress field which prevailed over the structure. The material properties, friction angles and cohesion, including their time evolution are selected such that the deformation pattern predicted by the LA is consistent with the two main thrusting events, the first forward and the second backward once the layers have sufficiently rotated. The fractures associated to the stress field determined at each step are convected on today configuration to define the complete pattern which should be observed. The end results are presented along virtual vertical wells and could be used within the oil industry at an early phase of exploration to prepare drealing operations.

Spatiotemporal deformation patterns of the Lake Urmia Causeway as characterized by multisensor InSAR analysis.

PubMed

Karimzadeh, Sadra; Matsuoka, Masashi; Ogushi, Fumitaka

2018-04-03

We present deformation patterns in the Lake Urmia Causeway (LUC) in NW Iran based on data collected from four SAR sensors in the form of interferometric synthetic aperture radar (InSAR) time series. Sixty-eight images from Envisat (2004-2008), ALOS-1 (2006-2010), TerraSAR-X (2012-2013) and Sentinel-1 (2015-2017) were acquired, and 227 filtered interferograms were generated using the small baseline subset (SBAS) technique. The rate of line-of-sight (LOS) subsidence of the LUC peaked at 90 mm/year between 2012 and 2013, mainly due to the loss of most of the water in Lake Urmia. Principal component analysis (PCA) was conducted on 200 randomly selected time series of the LUC, and the results are presented in the form of the three major components. The InSAR scores obtained from the PCA were used in a hydro-thermal model to investigate the dynamics of consolidation settlement along the LUC based on detrended water level and temperature data. The results can be used to establish a geodetic network around the LUC to identify more detailed deformation patterns and to help plan future efforts to reduce the possible costs of damage.

A Technique for Generating Volumetric Cine-Magnetic Resonance Imaging

DOE Office of Scientific and Technical Information (OSTI.GOV)

Harris, Wendy; Ren, Lei, E-mail: lei.ren@duke.edu; Department of Radiation Oncology, Duke University Medical Center, Durham, North Carolina

Purpose: The purpose of this study was to develop a techique to generate on-board volumetric cine-magnetic resonance imaging (VC-MRI) using patient prior images, motion modeling, and on-board 2-dimensional cine MRI. Methods and Materials: One phase of a 4-dimensional MRI acquired during patient simulation is used as patient prior images. Three major respiratory deformation patterns of the patient are extracted from 4-dimensional MRI based on principal-component analysis. The on-board VC-MRI at any instant is considered as a deformation of the prior MRI. The deformation field is represented as a linear combination of the 3 major deformation patterns. The coefficients of themore » deformation patterns are solved by the data fidelity constraint using the acquired on-board single 2-dimensional cine MRI. The method was evaluated using both digital extended-cardiac torso (XCAT) simulation of lung cancer patients and MRI data from 4 real liver cancer patients. The accuracy of the estimated VC-MRI was quantitatively evaluated using volume-percent-difference (VPD), center-of-mass-shift (COMS), and target tracking errors. Effects of acquisition orientation, region-of-interest (ROI) selection, patient breathing pattern change, and noise on the estimation accuracy were also evaluated. Results: Image subtraction of ground-truth with estimated on-board VC-MRI shows fewer differences than image subtraction of ground-truth with prior image. Agreement between normalized profiles in the estimated and ground-truth VC-MRI was achieved with less than 6% error for both XCAT and patient data. Among all XCAT scenarios, the VPD between ground-truth and estimated lesion volumes was, on average, 8.43 ± 1.52% and the COMS was, on average, 0.93 ± 0.58 mm across all time steps for estimation based on the ROI region in the sagittal cine images. Matching to ROI in the sagittal view achieved better accuracy when there was substantial breathing pattern change. The technique was robust against noise levels up to SNR = 20. For patient data, average tracking errors were less than 2 mm in all directions for all patients. Conclusions: Preliminary studies demonstrated the feasibility of generating real-time VC-MRI for on-board localization of moving targets in radiation therapy.« less

Non-target effects of a glyphosate-based herbicide on Common toad larvae (Bufo bufo, Amphibia) and associated algae are altered by temperature.

PubMed

Baier, Fabian; Gruber, Edith; Hein, Thomas; Bondar-Kunze, Elisabeth; Ivanković, Marina; Mentler, Axel; Brühl, Carsten A; Spangl, Bernhard; Zaller, Johann G

2016-01-01

Glyphosate-based herbicides are the most widely used pesticides in agriculture, horticulture, municipalities and private gardens that can potentially contaminate nearby water bodies inhabited by amphibians and algae. Moreover, the development and diversity of these aquatic organisms could also be affected by human-induced climate change that might lead to more periods with extreme temperatures. However, to what extent non-target effects of these herbicides on amphibians or algae are altered by varying temperature is not well known. We studied effects of five concentrations of the glyphosate-based herbicide formulation Roundup PowerFlex (0, 1.5, 3, 4 mg acid equivalent glyphosate L -1 as a one time addition and a pulse treatment of totally 4 mg a.e. glyphosate L -1 ) on larval development of Common toads ( Bufo bufo , L.; Amphibia: Anura) and associated algae communities under two temperature regimes (15 vs. 20 °C). Herbicide contamination reduced tail growth (-8%), induced the occurrence of tail deformations (i.e. lacerated or crooked tails) and reduced algae diversity (-6%). Higher water temperature increased tadpole growth (tail and body length (tl/bl) +66%, length-to-width ratio +4%) and decreased algae diversity (-21%). No clear relation between herbicide concentrations and tadpole growth or algae density or diversity was observed. Interactive effects of herbicides and temperature affected growth parameters, tail deformation and tadpole mortality indicating that the herbicide effects are temperature-dependent. Remarkably, herbicide-temperature interactions resulted in deformed tails in 34% of all herbicide treated tadpoles at 15 °C whereas no tail deformations were observed for the herbicide-free control at 15 °C or any tadpole at 20 °C; herbicide-induced mortality was higher at 15 °C but lower at 20 °C. These herbicide- and temperature-induced changes may have decided effects on ecological interactions in freshwater ecosystems. Although no clear dose-response effect was seen, the presence of glyphosate was decisive for an effect, suggesting that the lowest observed effect concentration (LOEC) in our study was 1.5 mg a.e. glyphosate L -1 water. Overall, our findings also question the relevance of pesticide risk assessments conducted at standard temperatures.

Non-target effects of a glyphosate-based herbicide on Common toad larvae (Bufo bufo, Amphibia) and associated algae are altered by temperature

PubMed Central

Baier, Fabian; Gruber, Edith; Bondar-Kunze, Elisabeth; Ivanković, Marina; Mentler, Axel; Brühl, Carsten A.; Spangl, Bernhard

2016-01-01

Background Glyphosate-based herbicides are the most widely used pesticides in agriculture, horticulture, municipalities and private gardens that can potentially contaminate nearby water bodies inhabited by amphibians and algae. Moreover, the development and diversity of these aquatic organisms could also be affected by human-induced climate change that might lead to more periods with extreme temperatures. However, to what extent non-target effects of these herbicides on amphibians or algae are altered by varying temperature is not well known. Methods We studied effects of five concentrations of the glyphosate-based herbicide formulation Roundup PowerFlex (0, 1.5, 3, 4 mg acid equivalent glyphosate L−1 as a one time addition and a pulse treatment of totally 4 mg a.e. glyphosate L−1) on larval development of Common toads (Bufo bufo, L.; Amphibia: Anura) and associated algae communities under two temperature regimes (15 vs. 20 °C). Results Herbicide contamination reduced tail growth (−8%), induced the occurrence of tail deformations (i.e. lacerated or crooked tails) and reduced algae diversity (−6%). Higher water temperature increased tadpole growth (tail and body length (tl/bl) +66%, length-to-width ratio +4%) and decreased algae diversity (−21%). No clear relation between herbicide concentrations and tadpole growth or algae density or diversity was observed. Interactive effects of herbicides and temperature affected growth parameters, tail deformation and tadpole mortality indicating that the herbicide effects are temperature-dependent. Remarkably, herbicide-temperature interactions resulted in deformed tails in 34% of all herbicide treated tadpoles at 15 °C whereas no tail deformations were observed for the herbicide-free control at 15 °C or any tadpole at 20 °C; herbicide-induced mortality was higher at 15 °C but lower at 20 °C. Discussion These herbicide- and temperature-induced changes may have decided effects on ecological interactions in freshwater ecosystems. Although no clear dose-response effect was seen, the presence of glyphosate was decisive for an effect, suggesting that the lowest observed effect concentration (LOEC) in our study was 1.5 mg a.e. glyphosate L−1 water. Overall, our findings also question the relevance of pesticide risk assessments conducted at standard temperatures. PMID:27833808

Membrane Mirrors With Bimorph Shape Actuators

NASA Technical Reports Server (NTRS)

Yang, Eui-Hyeok

2003-01-01

Deformable mirrors of a proposed type would be equipped with relatively-large-stroke microscopic piezoelectric actuators that would be used to maintain their reflective surfaces in precise shapes. These mirrors would be members of the class of MEMS-DM (for microelectromechanical system deformable mirror) devices, which offer potential for a precise optical control in adaptive-optics applications in such diverse fields as astronomy and vision science. The proposed mirror would be fabricated, in part, by use of a membrane-transfer technique. The actuator design would contain bimorph-type piezoelectric actuators.

Thalamic morphology in schizophrenia and schizoaffective disorder.

PubMed

Smith, Matthew J; Wang, Lei; Cronenwett, Will; Mamah, Daniel; Barch, Deanna M; Csernansky, John G

2011-03-01

Biomarkers are needed that can distinguish between schizophrenia and schizoaffective disorder to inform the ongoing debate over the diagnostic boundary between these two disorders. Neuromorphometric abnormalities of the thalamus have been reported in individuals with schizophrenia and linked to core features of the disorder, but have not been similarly investigated in individuals with schizoaffective disorder. In this study, we examine whether individuals with schizoaffective disorder have a pattern of thalamic deformation that is similar or different to the pattern found in individuals with schizophrenia. T1-weighted magnetic resonance images were collected from individuals with schizophrenia (n = 47), individuals with schizoaffective disorder (n = 15), and controls (n = 42). Large-deformation, high-dimensional brain mapping was used to obtain three-dimensional surfaces of the thalamus. Multiple analyses of variance were used to test for group differences in volume and measures of surface shape. Individuals with schizophrenia or schizoaffective disorder have similar thalamic volumes. Thalamic surface shape deformation associated with schizophrenia suggests selective involvement of the anterior and posterior thalamus, while deformations in mediodorsal and ventrolateral regions were observed in both groups. Schizoaffective disorder had distinct deformations in medial and lateral thalamic regions. Abnormalities distinct to schizoaffective disorder suggest involvement of the central and ventroposterior medial thalamus which may be involved in mood circuitry, dorsolateral nucleus which is involved in recall processing, and the lateral geniculate nucleus which is involved in visual processing. Copyright © 2010 Elsevier Ltd. All rights reserved.

Thalamic Morphology in Schizophrenia and Schizoaffective Disorder

PubMed Central

Smith, Matthew J.; Wang, Lei; Cronenwett, Will; Mamah, Daniel; Barch, Deanna M.; Csernansky, John G.

2010-01-01

Background Biomarkers are needed that can distinguish between schizophrenia and schizoaffective disorder to inform the ongoing debate over the diagnostic boundary between these two disorders. Neuromorphometric abnormalities of the thalamus have been reported in individuals with schizophrenia and linked to core features of the disorder, but have not been similarly investigated in individuals with schizoaffective disorder. In this study, we examine whether individuals with schizoaffective disorder have a pattern of thalamic deformation that is similar or different to the pattern found in individuals with schizophrenia. Method T1-weighted magnetic resonance images were collected from individuals with schizophrenia (n=47), individuals with schizoaffective disorder (n=15), and controls (n=42). Large-deformation, high-dimensional brain mapping was used to obtain three-dimensional surfaces of the thalamus. Multiple analyses of variance were used to test for group differences in volume and measures of surface shape. Results Individuals with schizophrenia or schizoaffective disorder have similar thalamic volumes. Thalamic surface shape deformation associated with schizophrenia suggests selective involvement of the anterior and posterior thalamus, while deformations in mediodorsal and ventrolateral regions were observed in both groups. Schizoaffective disorder had distinct deformations in medial and lateral thalamic regions. Conclusions Abnormalities distinct to schizoaffective disorder suggest involvement of the central and ventroposterior medial thalamus which may be involved in mood circuitry, dorsolateral nucleus which is involved in recall processing, and the lateral geniculate nucleus which is involved in visual processing. PMID:20797731

Dark-field imaging based on post-processed electron backscatter diffraction patterns of bulk crystalline materials in a scanning electron microscope.

PubMed

Brodusch, Nicolas; Demers, Hendrix; Gauvin, Raynald

2015-01-01

Dark-field (DF) images were acquired in the scanning electron microscope with an offline procedure based on electron backscatter diffraction (EBSD) patterns (EBSPs). These EBSD-DF images were generated by selecting a particular reflection on the electron backscatter diffraction pattern and by reporting the intensity of one or several pixels around this point at each pixel of the EBSD-DF image. Unlike previous studies, the diffraction information of the sample is the basis of the final image contrast with a pixel scale resolution at the EBSP providing DF imaging in the scanning electron microscope. The offline facility of this technique permits the selection of any diffraction condition available in the diffraction pattern and displaying the corresponding image. The high number of diffraction-based images available allows a better monitoring of deformation structures compared to electron channeling contrast imaging (ECCI) which is generally limited to a few images of the same area. This technique was applied to steel and iron specimens and showed its high capability in describing more rigorously the deformation structures around micro-hardness indents. Due to the offline relation between the reference EBSP and the EBSD-DF images, this new technique will undoubtedly greatly improve our knowledge of deformation mechanism and help to improve our understanding of the ECCI contrast mechanisms. Copyright © 2014 Elsevier B.V. All rights reserved.

Anisotropic ripple deformation in phosphorene

DOE PAGES

Kou, Liangzhi; Ma, Yandong; Smith, Sean C.; ...

2015-04-07

Here, two-dimensional materials tend to become crumpled according to the Mermin-Wagner theorem, and the resulting ripple deformation may significantly influence electronic properties as observed in graphene and MoS 2. Here, we unveil by first-principles calculations a new, highly anisotropic ripple pattern in phosphorene, a monolayer black phosphorus, where compression-induced ripple deformation occurs only along the zigzag direction in the strain range up to 10%, but not the armchair direction. This direction-selective ripple deformation mode in phosphorene stems from its puckered structure with coupled hinge-like bonding configurations and the resulting anisotropic Poisson ratio. We also construct an analytical model using classicalmore » elasticity theory for ripple deformation in phosphorene under arbitrary strain. The present results offer new insights into the mechanisms governing the structural and electronic properties of phosphorene crucial to its device applications.« less

Anisotropic ripple deformation in phosphorene

DOE Office of Scientific and Technical Information (OSTI.GOV)

Kou, Liangzhi; Ma, Yandong; Smith, Sean C.

Here, two-dimensional materials tend to become crumpled according to the Mermin-Wagner theorem, and the resulting ripple deformation may significantly influence electronic properties as observed in graphene and MoS 2. Here, we unveil by first-principles calculations a new, highly anisotropic ripple pattern in phosphorene, a monolayer black phosphorus, where compression-induced ripple deformation occurs only along the zigzag direction in the strain range up to 10%, but not the armchair direction. This direction-selective ripple deformation mode in phosphorene stems from its puckered structure with coupled hinge-like bonding configurations and the resulting anisotropic Poisson ratio. We also construct an analytical model using classicalmore » elasticity theory for ripple deformation in phosphorene under arbitrary strain. The present results offer new insights into the mechanisms governing the structural and electronic properties of phosphorene crucial to its device applications.« less

Global marine bacterial diversity peaks at high latitudes in winter

PubMed Central

Ladau, Joshua; Sharpton, Thomas J; Finucane, Mariel M; Jospin, Guillaume; Kembel, Steven W; O'Dwyer, James; Koeppel, Alexander F; Green, Jessica L; Pollard, Katherine S

2013-01-01

Genomic approaches to characterizing bacterial communities are revealing significant differences in diversity and composition between environments. But bacterial distributions have not been mapped at a global scale. Although current community surveys are way too sparse to map global diversity patterns directly, there is now sufficient data to fit accurate models of how bacterial distributions vary across different environments and to make global scale maps from these models. We apply this approach to map the global distributions of bacteria in marine surface waters. Our spatially and temporally explicit predictions suggest that bacterial diversity peaks in temperate latitudes across the world's oceans. These global peaks are seasonal, occurring 6 months apart in the two hemispheres, in the boreal and austral winters. This pattern is quite different from the tropical, seasonally consistent diversity patterns observed for most macroorganisms. However, like other marine organisms, surface water bacteria are particularly diverse in regions of high human environmental impacts on the oceans. Our maps provide the first picture of bacterial distributions at a global scale and suggest important differences between the diversity patterns of bacteria compared with other organisms. PMID:23514781

Patterns and Variation in Benthic Biodiversity in a Large Marine Ecosystem.

PubMed

Piacenza, Susan E; Barner, Allison K; Benkwitt, Cassandra E; Boersma, Kate S; Cerny-Chipman, Elizabeth B; Ingeman, Kurt E; Kindinger, Tye L; Lee, Jonathan D; Lindsley, Amy J; Reimer, Jessica N; Rowe, Jennifer C; Shen, Chenchen; Thompson, Kevin A; Thurman, Lindsey L; Heppell, Selina S

2015-01-01

While there is a persistent inverse relationship between latitude and species diversity across many taxa and ecosystems, deviations from this norm offer an opportunity to understand the conditions that contribute to large-scale diversity patterns. Marine systems, in particular, provide such an opportunity, as marine diversity does not always follow a strict latitudinal gradient, perhaps because several hypothesized drivers of the latitudinal diversity gradient are uncorrelated in marine systems. We used a large scale public monitoring dataset collected over an eight year period to examine benthic marine faunal biodiversity patterns for the continental shelf (55-183 m depth) and slope habitats (184-1280 m depth) off the US West Coast (47°20'N-32°40'N). We specifically asked whether marine biodiversity followed a strict latitudinal gradient, and if these latitudinal patterns varied across depth, in different benthic substrates, and over ecological time scales. Further, we subdivided our study area into three smaller regions to test whether coast-wide patterns of biodiversity held at regional scales, where local oceanographic processes tend to influence community structure and function. Overall, we found complex patterns of biodiversity on both the coast-wide and regional scales that differed by taxonomic group. Importantly, marine biodiversity was not always highest at low latitudes. We found that latitude, depth, substrate, and year were all important descriptors of fish and invertebrate diversity. Invertebrate richness and taxonomic diversity were highest at high latitudes and in deeper waters. Fish richness also increased with latitude, but exhibited a hump-shaped relationship with depth, increasing with depth up to the continental shelf break, ~200 m depth, and then decreasing in deeper waters. We found relationships between fish taxonomic and functional diversity and latitude, depth, substrate, and time at the regional scale, but not at the coast-wide scale, suggesting that coast-wide patterns can obscure important correlates at smaller scales. Our study provides insight into complex diversity patterns of the deep water soft substrate benthic ecosystems off the US West Coast.

Evaluation of fingerprint deformation using optical coherence tomography

NASA Astrophysics Data System (ADS)

Gutierrez da Costa, Henrique S.; Maxey, Jessica R.; Silva, Luciano; Ellerbee, Audrey K.

2014-02-01

Biometric identification systems have important applications to privacy and security. The most widely used of these, print identification, is based on imaging patterns present in the fingers, hands and feet that are formed by the ridges, valleys and pores of the skin. Most modern print sensors acquire images of the finger when pressed against a sensor surface. Unfortunately, this pressure may result in deformations, characterized by changes in the sizes and relative distances of the print patterns, and such changes have been shown to negatively affect the performance of fingerprint identification algorithms. Optical coherence tomography (OCT) is a novel imaging technique that is capable of imaging the subsurface of biological tissue. Hence, OCT may be used to obtain images of subdermal skin structures from which one can extract an internal fingerprint. The internal fingerprint is very similar in structure to the commonly used external fingerprint and is of increasing interest in investigations of identify fraud. We proposed and tested metrics based on measurements calculated from external and internal fingerprints to evaluate the amount of deformation of the skin. Such metrics were used to test hypotheses about the differences of deformation between the internal and external images, variations with the type of finger and location inside the fingerprint.

Analysis of 3-D Tongue Motion From Tagged and Cine Magnetic Resonance Images

PubMed Central

Woo, Jonghye; Lee, Junghoon; Murano, Emi Z.; Stone, Maureen; Prince, Jerry L.

2016-01-01

Purpose Measuring tongue deformation and internal muscle motion during speech has been a challenging task because the tongue deforms in 3 dimensions, contains interdigitated muscles, and is largely hidden within the vocal tract. In this article, a new method is proposed to analyze tagged and cine magnetic resonance images of the tongue during speech in order to estimate 3-dimensional tissue displacement and deformation over time. Method The method involves computing 2-dimensional motion components using a standard tag-processing method called harmonic phase, constructing superresolution tongue volumes using cine magnetic resonance images, segmenting the tongue region using a random-walker algorithm, and estimating 3-dimensional tongue motion using an incompressible deformation estimation algorithm. Results Evaluation of the method is presented with a control group and a group of people who had received a glossectomy carrying out a speech task. A 2-step principal-components analysis is then used to reveal the unique motion patterns of the subjects. Azimuth motion angles and motion on the mirrored hemi-tongues are analyzed. Conclusion Tests of the method with a various collection of subjects show its capability of capturing patient motion patterns and indicate its potential value in future speech studies. PMID:27295428

Congruence analysis of geodetic networks - hypothesis tests versus model selection by information criteria

NASA Astrophysics Data System (ADS)

Lehmann, Rüdiger; Lösler, Michael

2017-12-01

Geodetic deformation analysis can be interpreted as a model selection problem. The null model indicates that no deformation has occurred. It is opposed to a number of alternative models, which stipulate different deformation patterns. A common way to select the right model is the usage of a statistical hypothesis test. However, since we have to test a series of deformation patterns, this must be a multiple test. As an alternative solution for the test problem, we propose the p-value approach. Another approach arises from information theory. Here, the Akaike information criterion (AIC) or some alternative is used to select an appropriate model for a given set of observations. Both approaches are discussed and applied to two test scenarios: A synthetic levelling network and the Delft test data set. It is demonstrated that they work but behave differently, sometimes even producing different results. Hypothesis tests are well-established in geodesy, but may suffer from an unfavourable choice of the decision error rates. The multiple test also suffers from statistical dependencies between the test statistics, which are neglected. Both problems are overcome by applying information criterions like AIC.

Effect of initial grain size on inhomogeneous plastic deformation and twinning behavior in high manganese austenitic steel with a polycrystalline microstructure

NASA Astrophysics Data System (ADS)

Ueji, R.; Tsuchida, N.; Harada, K.; Takaki, K.; Fujii, H.

2015-08-01

The grain size effect on the deformation twinning in a high manganese austenitic steel which is so-called TWIP (twining induced plastic deformation) steel was studied in order to understand how to control deformation twinning. The 31wt%Mn-3%Al-3% Si steel was cold rolled and annealed at various temperatures to obtain fully recrystallized structures with different mean grain sizes. These annealed sheets were examined by room temperature tensile tests at a strain rate of 10-4/s. The coarse grained sample (grain size: 49.6μm) showed many deformation twins and the deformation twinning was preferentially found in the grains in which the tensile axis is parallel near to [111]. On the other hand, the sample with finer grains (1.8 μm) had few grains with twinning even after the tensile deformation. The electron back scattering diffraction (EB SD) measurements clarified the relationship between the anisotropy of deformation twinning and that of inhomogeneous plastic deformation. Based on the EBSD analysis, the mechanism of the suppression of deformation twinning by grain refinement was discussed with the concept of the slip pattern competition between the slip system governed by a grain boundary and that activated by the macroscopic load.

A six-year grazing exclusion changed plant species diversity of a Stipa breviflora desert steppe community, northern China.

PubMed

Wang, Xing; Yang, Xinguo; Wang, Lei; Chen, Lin; Song, Naiping; Gu, Junlong; Xue, Yi

2018-01-01

Excluding grazers is one of most efficient ways to restore degraded grasslands in desert-steppe communities, but may negatively affect the recovery of plant species diversity. However, diversity differences between grazed and fenced grasslands in desert-steppe are poorly known. In a Stipa breviflora desert steppe community in Northern China, we established six plots to examine spatial patterns of plant species diversity under grazed and fenced conditions, respectively. We addressed three aspects of species diversity: (1) The logistic, exponential and power models were used to describe the species-area curve (SAR). Species richness, abundance and Shannon diversity values change differently with increasing sampling areas inside and outside of the fence. The best fitted model for SAR was the logistic model. Excluding grazers had a significant impact on the shape of SAR. (2) Variograms was applied to examine the spatial characteristics of plant species diversity. We found strong spatial autocorrelations in the diversity variables both inside and outside the fence. After grazing exclusion, the spatial heterogeneity decreased in species richness, increased in abundance and did not change in Shannon diversity. (3) We used variance partitioning to determine the relative contributions of spatial and environmental factors to plant species diversity patterns. Environmental factors explained the largest proportion of variation in species diversity, while spatial factors contributed little. Our results suggest that grazing enclosures decreased species diversity patterns and the spatial pattern of the S. breviflora desert steppe community was predictable.

A six-year grazing exclusion changed plant species diversity of a Stipa breviflora desert steppe community, northern China

PubMed Central

Wang, Xing; Yang, Xinguo; Wang, Lei; Chen, Lin; Gu, Junlong; Xue, Yi

2018-01-01

Excluding grazers is one of most efficient ways to restore degraded grasslands in desert-steppe communities, but may negatively affect the recovery of plant species diversity. However, diversity differences between grazed and fenced grasslands in desert-steppe are poorly known. In a Stipa breviflora desert steppe community in Northern China, we established six plots to examine spatial patterns of plant species diversity under grazed and fenced conditions, respectively. We addressed three aspects of species diversity: (1) The logistic, exponential and power models were used to describe the species-area curve (SAR). Species richness, abundance and Shannon diversity values change differently with increasing sampling areas inside and outside of the fence. The best fitted model for SAR was the logistic model. Excluding grazers had a significant impact on the shape of SAR. (2) Variograms was applied to examine the spatial characteristics of plant species diversity. We found strong spatial autocorrelations in the diversity variables both inside and outside the fence. After grazing exclusion, the spatial heterogeneity decreased in species richness, increased in abundance and did not change in Shannon diversity. (3) We used variance partitioning to determine the relative contributions of spatial and environmental factors to plant species diversity patterns. Environmental factors explained the largest proportion of variation in species diversity, while spatial factors contributed little. Our results suggest that grazing enclosures decreased species diversity patterns and the spatial pattern of the S. breviflora desert steppe community was predictable. PMID:29456890

Genomic patterns of species diversity and divergence in Eucalyptus.

PubMed

Hudson, Corey J; Freeman, Jules S; Myburg, Alexander A; Potts, Brad M; Vaillancourt, René E

2015-06-01

We examined genome-wide patterns of DNA sequence diversity and divergence among six species of the important tree genus Eucalyptus and investigated their relationship with genomic architecture. Using c. 90 range-wide individuals of each Eucalyptus species (E. grandis, E. urophylla, E. globulus, E. nitens, E. dunnii and E. camaldulensis), genetic diversity and divergence were estimated from 2840 polymorphic diversity arrays technology markers covering the 11 chromosomes. Species differentiating markers (SDMs) identified in each of 15 pairwise species comparisons, along with species diversity (HHW ) and divergence (FST ), were projected onto the E. grandis reference genome. Across all species comparisons, SDMs totalled 1.1-5.3% of markers and were widely distributed throughout the genome. Marker divergence (FST and SDMs) and diversity differed among and within chromosomes. Patterns of diversity and divergence were broadly conserved across species and significantly associated with genomic features, including the proximity of markers to genes, the relative number of clusters of tandem duplications, and gene density within or among chromosomes. These results suggest that genomic architecture influences patterns of species diversity and divergence in the genus. This influence is evident across the six species, encompassing diverse phylogenetic lineages, geography and ecology. © 2015 University of Tasmania New Phytologist © 2015 New Phytologist Trust.

Thin-skinned deformation of sedimentary rocks in Valles Marineris, Mars

USGS Publications Warehouse

Metz, Joannah; Grotzinger, John P.; Okubo, Chris; Milliken, Ralph

2010-01-01

Deformation of sedimentary rocks is widespread within Valles Marineris, characterized by both plastic and brittle deformation identified in Candor, Melas, and Ius Chasmata. We identified four deformation styles using HiRISE and CTX images: kilometer-scale convolute folds, detached slabs, folded strata, and pull-apart structures. Convolute folds are detached rounded slabs of material with alternating dark- and light-toned strata and a fold wavelength of about 1 km. The detached slabs are isolated rounded blocks of material, but they exhibit only highly localized evidence of stratification. Folded strata are composed of continuously folded layers that are not detached. Pull-apart structures are composed of stratified rock that has broken off into small irregularly shaped pieces showing evidence of brittle deformation. Some areas exhibit multiple styles of deformation and grade from one type of deformation into another. The deformed rocks are observed over thousands of kilometers, are limited to discrete stratigraphic intervals, and occur over a wide range in elevations. All deformation styles appear to be of likely thin-skinned origin. CRISM reflectance spectra show that some of the deformed sediments contain a component of monohydrated and polyhydrated sulfates. Several mechanisms could be responsible for the deformation of sedimentary rocks in Valles Marineris, such as subaerial or subaqueous gravitational slumping or sliding and soft sediment deformation, where the latter could include impact-induced or seismically induced liquefaction. These mechanisms are evaluated based on their expected pattern, scale, and areal extent of deformation. Deformation produced from slow subaerial or subaqueous landsliding and liquefaction is consistent with the deformation observed in Valles Marineris.

Recent Observations and Structural Analysis of Surge-Type Glaciers in the Glacier Bay Area

NASA Astrophysics Data System (ADS)

Mayer, H.; Herzfeld, U. C.

2003-12-01

The Chugach-St.-Elias Mountains in North America hold the largest non-polar connected glaciated area of the world. Most of its larger glaciers are surge-type glaciers. In the summer of 2003, we collected aerial photographic and GPS data over numerous glaciers in the eastern St. Elias Mountains, including the Glacier Bay area. Observed glaciers include Davidson, Casement, McBride, Riggs, Cushing, Carroll, Rendu, Tsirku, Grand Pacific, Melbern, Ferris, Margerie, Johns Hopkins, Lamplugh, Reid, Burroughs, Morse, Muir and Willard Glaciers, of which Carroll, Rendu, Ferris, Grand Pacific, Johns Hopkins and Margerie Glaciers are surge-type glaciers. Our approach utilizes a quantitative analysis of surface patterns, following the principles of structural geology for the analysis of brittle-deformation patterns (manifested in crevasses) and ductile deformation patterns (visible in folded moraines). First results will be presented.

Consistent role of Quaternary climate change in shaping current plant functional diversity patterns across European plant orders.

PubMed

Ordonez, Alejandro; Svenning, Jens-Christian

2017-02-23

Current and historical environmental conditions are known to determine jointly contemporary species distributions and richness patterns. However, whether historical dynamics in species distributions and richness translate to functional diversity patterns remains, for the most part, unknown. The geographic patterns of plant functional space size (richness) and packing (dispersion) for six widely distributed orders of European angiosperms were estimated using atlas distribution data and trait information. Then the relative importance of late-Quaternary glacial-interglacial climate change and contemporary environmental factors (climate, productivity, and topography) as determinants of functional diversity of evaluated orders was assesed. Functional diversity patterns of all evaluated orders exhibited prominent glacial-interglacial climate change imprints, complementing the influence of contemporary environmental conditions. The importance of Quaternary glacial-interglacial climate change factors was comparable to that of contemporary environmental factors across evaluated orders. Therefore, high long-term paleoclimate variability has imposed consistent supplementary constraints on functional diversity of multiple plant groups, a legacy that may permeate to ecosystem functioning and resilience. These findings suggest that strong near-future anthropogenic climate change may elicit long-term functional disequilibria in plant functional diversity.

Higher speciation and lower extinction rates influence mammal diversity gradients in Asia.

PubMed

Tamma, Krishnapriya; Ramakrishnan, Uma

2015-02-04

Little is known about the patterns and correlates of mammal diversity gradients in Asia. In this study, we examine patterns of species distributions and phylogenetic diversity in Asia and investigate if the observed diversity patterns are associated with differences in diversification rates between the tropical and non-tropical regions. We used species distribution maps and phylogenetic trees to generate species and phylogenetic diversity measures for 1° × 1° cells across mainland Asia. We constructed lineage-through-time plots and estimated diversification shift-times to examine the temporal patterns of diversifications across orders. Finally, we tested if the observed gradients in Asia could be associated with geographical differences in diversification rates across the tropical and non-tropical biomes. We estimated speciation, extinction and dispersal rates across these two regions for mammals, both globally and for Asian mammals. Our results demonstrate strong latitudinal and longitudinal gradients of species and phylogenetic diversity with Southeast Asia and the Himalayas showing highest diversity. Importantly, our results demonstrate that differences in diversification (speciation, extinction and dispersal) rates between the tropical and the non-tropical biomes influence the observed diversity gradients globally and in Asia. For the first time, we demonstrate that Asian tropics act as both cradles and museums of mammalian diversity. Temporal and spatial variation in diversification rates across different lineages of mammals is an important correlate of species diversity gradients observed in Asia.

Genomic patterns in Acropora cervicornis show extensive population structure and variable genetic diversity.

PubMed

Drury, Crawford; Schopmeyer, Stephanie; Goergen, Elizabeth; Bartels, Erich; Nedimyer, Ken; Johnson, Meaghan; Maxwell, Kerry; Galvan, Victor; Manfrino, Carrie; Lirman, Diego

2017-08-01

Threatened Caribbean coral communities can benefit from high-resolution genetic data used to inform management and conservation action. We use Genotyping by Sequencing (GBS) to investigate genetic patterns in the threatened coral, Acropora cervicornis , across the Florida Reef Tract (FRT) and the western Caribbean. Results show extensive population structure at regional scales and resolve previously unknown structure within the FRT. Different regions also exhibit up to threefold differences in genetic diversity (He), suggesting targeted management based on the goals and resources of each population is needed. Patterns of genetic diversity have a strong spatial component, and our results show Broward and the Lower Keys are among the most diverse populations in Florida. The genetic diversity of Caribbean staghorn coral is concentrated within populations and within individual reefs (AMOVA), highlighting the complex mosaic of population structure. This variance structure is similar over regional and local scales, which suggests that in situ nurseries are adequately capturing natural patterns of diversity, representing a resource that can replicate the average diversity of wild assemblages, serving to increase intraspecific diversity and potentially leading to improved biodiversity and ecosystem function. Results presented here can be translated into specific goals for the recovery of A. cervicornis , including active focus on low diversity areas, protection of high diversity and connectivity, and practical thresholds for responsible restoration.

Reconciling Pre- and Co-Seismic Deformation at Megathrusts: Tohoku Informing Cascadia

NASA Astrophysics Data System (ADS)

Furlong, K. P.; Govers, R. M.

2013-12-01

One of the outstanding goals of earthquake science is to effectively anticipate the earthquake characteristics of a future event - magnitude, rupture area, slip history - through the judicious application of models that use observations of inter-earthquake deformation and the history of earthquakes along that plate boundary segment. The series of great earthquakes over the past decade since the 2004 Mw 9.2 Sumatra earthquake have demonstrated both the sobering reality that our current models of subduction zone earthquake genesis are insufficient but more positively have provided a wealth of data and observations that can be used to develop improved framework models of the lithospheric behavior through the earthquake cycle in subduction zones. Some of the issues that recent observations raise are straightforward, while others imply aspects of the subduction process that have not been previously considered important. Based on observations of a range of great earthquakes since 2004, and with a particular focus on the 2011 Mw 9.0 Tohoku event we can identify a suite of key issues that include: (1) Patterns of inter-seismic deformation (strain accumulation) are not simply the converse of the co-seismic elastic strain release. (2) Deformation of the slab during the earthquake cycle is a common occurrence and its role in buffering upper-plate deformation is a key consideration in the potential tsunamigenic character of a subduction system. (3) Rates of pre-earthquake deformation (e.g. observed upper-plate GPS displacements) and inferred slip deficit accumulation on the megathrust are inconsistent with co-seismic displacements/fault slip and recurrence intervals. (4) Patterns of megathrust locked patches, degrees of coupling and other parameterizations that are used to define earthquake potential have only a loose agreement with the actual patterns of slip and moment release seen in the ensuing great earthquake. Simple elastic models do provide a general agreement between processes along the megathrust and observations regionally - i.e. with such models (e.g. Okada-type solutions) we find reasonable agreement among geodetic and seismologic models. In assessing sensitivities in our preliminary modeling, we find that depending on the strength and rheologic considerations in the model, similar patterns of displacement in the upper plate in the typical observing zones (on-shore, ~ 100+ km from trench) can have significantly different displacement effects in the vicinity of the earthquake rupture and trench - the areas most critical to tsunamigenesis and assessing earthquake magnitude. Also although it is perhaps reassuring to see that there is general agreement between the seismologically determined finite fault models (FFM) and the observed surface deformation; this information after-the-fact does not tell us why the slip deficit accumulated as it did. Here we report on improved (numerical) models of the strain accumulation and release cycle in megathrust zones that better incorporate variations in rheology, the effects of plate boundary character (pre- and co-seismic), and the relationships between pre-earthquakes observed deformation and co-seismic rupture characteristics.

Putting Beta-Diversity on the Map: Broad-Scale Congruence and Coincidence in the Extremes

PubMed Central

McKnight, Meghan W; White, Peter S; McDonald, Robert I; Lamoreux, John F; Sechrest, Wes; Ridgely, Robert S; Stuart, Simon N

2007-01-01

Beta-diversity, the change in species composition between places, is a critical but poorly understood component of biological diversity. Patterns of beta-diversity provide information central to many ecological and evolutionary questions, as well as to conservation planning. Yet beta-diversity is rarely studied across large extents, and the degree of similarity of patterns among taxa at such scales remains untested. To our knowledge, this is the first broad-scale analysis of cross-taxon congruence in beta-diversity, and introduces a new method to map beta-diversity continuously across regions. Congruence between amphibian, bird, and mammal beta-diversity in the Western Hemisphere varies with both geographic location and spatial extent. We demonstrate that areas of high beta-diversity for the three taxa largely coincide, but areas of low beta-diversity exhibit little overlap. These findings suggest that similar processes lead to high levels of differentiation in amphibian, bird, and mammal assemblages, while the ecological and biogeographic factors influencing homogeneity in vertebrate assemblages vary. Knowledge of beta-diversity congruence can help formulate hypotheses about the mechanisms governing regional diversity patterns and should inform conservation, especially as threat from global climate change increases. PMID:17927449

Patterns of genetic diversity reveal multiple introductions and recurrent founder effects during range expansion in invasive populations of Geranium carolinianum (Geraniaceae)

PubMed Central

Shirk, R Y; Hamrick, J L; Zhang, C; Qiang, S

2014-01-01

Genetic diversity, and thus the adaptive potential of invasive populations, is largely based on three factors: patterns of genetic diversity in the species' native range, the number and location of introductions and the number of founding individuals per introduction. Specifically, reductions in genetic diversity (‘founder effects') should be stronger for species with low within-population diversity in their native range and few introductions of few individuals to the invasive range. We test these predictions with Geranium carolinianum, a winter annual herb native to North America and invasive in China. We measure the extent of founder effects using allozymes and microsatellites, and ask whether this is consistent with its colonization history and patterns of diversity in the native range. In the native range, genetic diversity is higher and structure is lower than expected based on life history traits. In China, our results provide evidence for multiple introductions near Nanjing, Jiangsu province, with subsequent range expansion to the west and south. Patterns of genetic diversity across China reveal weak founder effects that are driven largely by low-diversity populations at the expansion front, away from the introduction location. This suggests that reduced diversity in China has resulted from successive founder events during range expansion, and that the loss of genetic diversity in the Nanjing area was mitigated by multiple introductions from diverse source populations. This has implications for the future of G. carolinianum in China, as continued gene flow among populations should eventually increase genetic diversity within the more recently founded populations. PMID:24346497

Cross-taxon congruence and environmental conditions.

PubMed

Toranza, Carolina; Arim, Matías

2010-07-16

Diversity patterns of different taxa typically covary in space, a phenomenon called cross-taxon congruence. This pattern has been explained by the effect of one taxon diversity on taxon diversity, shared biogeographic histories of different taxa, and/or common responses to environmental conditions. A meta-analysis of the association between environment and diversity patterns found that in 83 out of 85 studies, more than 60% of the spatial variability in species richness was related to variables representing energy, water or their interaction. The role of the environment determining taxa diversity patterns leads us to hypothesize that this would explain the observed cross-taxon congruence. However, recent analyses reported the persistence of cross-taxon congruence when environmental effect was statistically removed. Here we evaluate this hypothesis, analyzing the cross-taxon congruence between birds and mammals in the Brazilian Cerrado, and assess the environmental role on the spatial covariation in diversity patterns. We found a positive association between avian and mammal richness and a positive latitudinal trend for both groups in the Brazilian Cerrado. Regression analyses indicated an effect of latitude, PET, and mean temperature over both biological groups. In addition, we show that NDVI was only associated with avian diversity; while the annual relative humidity, was only correlated with mammal diversity. We determined the environmental effects on diversity in a path analysis that accounted for 73% and 76% of the spatial variation in avian and mammal richness. However, an association between avian and mammal diversity remains significant. Indeed, the importance of this link between bird and mammal diversity was also supported by a significant association between birds and mammal spatial autoregressive model residuals. Our study corroborates the main role of environmental conditions on diversity patterns, but suggests that other important mechanisms, which have not been properly evaluated, are involved in the observed cross-taxon congruence. The approaches introduced here indicate that the prevalence of a significant association among taxa, after considering the environmental determinant, could indicate both the need to incorporate additional processes (e.g. biogeographic and evolutionary history or trophic interactions) and/or the existence of a shared trend in detection biases among taxa and regions.

Real-time tricolor phase measuring profilometry based on CCD sensitivity calibration

NASA Astrophysics Data System (ADS)

Zhu, Lin; Cao, Yiping; He, Dawu; Chen, Cheng

2017-02-01

A real-time tricolor phase measuring profilometry (RTPMP) based on charge coupled device (CCD) sensitivity calibration is proposed. Only one colour fringe pattern whose red (R), green (G) and blue (B) components are, respectively, coded as three sinusoidal phase-shifting gratings with an equivalent shifting phase of 2π/3 is needed and sent to an appointed flash memory on a specialized digital light projector (SDLP). A specialized time-division multiplexing timing sequence actively controls the SDLP to project the fringe patterns in R, G and B channels sequentially onto the measured object in one over seventy-two of a second and meanwhile actively controls a high frame rate monochrome CCD camera to capture the corresponding deformed patterns synchronously with the SDLP. So the sufficient information for reconstructing the three-dimensional (3D) shape in one over twenty-four of a second is obtained. Due to the different spectral sensitivity of the CCD camera to RGB lights, the captured deformed patterns from R, G and B channels cannot share the same peak and valley, which will lead to lower accuracy or even failing to reconstruct the 3D shape. So a deformed pattern amending method based on CCD sensitivity calibration is developed to guarantee the accurate 3D reconstruction. The experimental results verify the feasibility of the proposed RTPMP method. The proposed RTPMP method can obtain the 3D shape at over the video frame rate of 24 frames per second, avoid the colour crosstalk completely and be effective for measuring real-time changing object.

Influence of the Enteric Nervous System on Gut Motility Patterns in Zebrafish

NASA Astrophysics Data System (ADS)

Baker, Ryan; Ganz, Julia; Melancon, Ellie; Eisen, Judith; Parthasarathy, Raghuveer

The enteric nervous system (ENS), composed of diverse neuronal subtypes and glia, regulates essential gut functions including motility, secretion, and homeostasis. In humans and animals, decreased numbers of enteric neurons lead to a variety of types of gut dysfunction. However, surprisingly little is known about how the number, position, or subtype of enteric neurons affect the regulation of gut peristalsis, due to the lack of good model systems and the lack of tools for the quantitative characterization of gut motion. We have therefore developed a method of quantitative spatiotemporal mapping using differential interference contrast microscopy and particle image velocimetry, and have applied this to investigate intestinal dynamics in normal and mutant larval zebrafish. From movies of gut motility, we obtain a velocity vector field representative of gut motion, from which we can quantify parameters relating to gut peristalsis such as frequency, wave speed, deformation amplitudes, wave duration, and non-linearity of waves. We show that mutants with reduced neuron number have contractions that are more regular in time and reduced in amplitude compared to wild-type (normal) fish. We also show that feeding fish before their yolk is consumed leads to stronger motility patterns. We acknowledge support from NIH awards P50 GM098911 and P01 HD022486.

Temporally variable environments maintain more beta-diversity in Mediterranean landscapes

NASA Astrophysics Data System (ADS)

Martin, Beatriz; Ferrer, Miguel

2015-10-01

We examined the relationships between different environmental factors and the alpha and beta-diversity of terrestrial vertebrates (birds, mammals, amphibians and reptiles) in a Mediterranean region at the landscape level. We investigated whether the mechanisms underlying alpha and beta-diversity patterns are influenced by energy availability, habitat heterogeneity and temporal variability and if the drivers of the diversity patterns differed between both components of diversity. We defined alpha-diversity as synonym of species richness whereas beta-diversity was measured as distinctiveness. We evaluated a total of 13 different predictors using generalized linear mixed model (GLMM) analysis. Habitat spatial heterogeneity increased alpha-diversity, but contrastingly, it did not significantly affect beta-diversity among sites. Disturbed landscapes may show higher habitat spatial variation and higher alpha-diversity due to the contribution of highly generalist species that are wide-distributed and do not differ in composition (beta-diversity) among different sites within the region. Contrastingly, higher beta-diversity levels were negatively related to more stable sites in terms of temporal environmental variation. This negative relationship between environmental stability and beta-diversity levels is explained in terms of species adaptation to the local environmental conditions. Our study highlights the importance of temporal environmental variability in maintaining beta-diversity patterns under highly variable environmental conditions.

Holographic interferometric and correlation-based laser speckle metrology for 3D deformations in dentistry

NASA Astrophysics Data System (ADS)

Dekiff, Markus; Kemper, Björn; Kröger, Elke; Denz, Cornelia; Dirksen, Dieter

2017-03-01

The mechanical loading of dental restorations and hard tissue is often investigated numerically. For validation and optimization of such simulations, comparisons with measured deformations are essential. We combine digital holographic interferometry and digital speckle photography for the determination of microscopic deformations with a photogrammetric method that is based on digital image correlation of a projected laser speckle pattern. This multimodal workstation allows the simultaneous acquisition of the specimen's macroscopic 3D shape and thus a quantitative comparison of measured deformations with simulation data. In order to demonstrate the feasibility of our system, two applications are presented: the quantitative determination of (1) the deformation of a mandible model due to mechanical loading of an inserted dental implant and of (2) the deformation of a (dental) bridge model under mechanical loading. The results were compared with data from finite element analyses of the investigated applications. The experimental results showed close agreement with those of the simulations.

Fluid Surface Deformation by Objects in the Cheerios Effect

NASA Astrophysics Data System (ADS)

Nguyen, Khoi; Miller, Michael; Mandre, Shreyas; Mandre Lab Team

2012-11-01

Small objects floating on a fluid/air interface deform of the surface depending on material surface properties, density, and geometry. These objects attract each other through capillary interactions, a phenomenon dubbed the ``cheerios effect.'' The attractive force and torque exerted on these objects by the interface can be estimated if the meniscus deformation is known. In addition, the floating objects can also rotate due to such an interaction. We present a series of experiments focused on visualizing the the motions of the floating objects and the deformation of the interface. The experiments involve thin laser-cut acrylic pieces attracting each other on water in a large glass petri dish and a camera set-up to capture the process. Furthermore, optical distortion of a grid pattern is used to visualize the water surface deformation near the edge of the objects. This study of the deformation of the water surface around a floating object, of the attractive/repulsive forces, and of post-contact rotational dynamics are potentially instrumental in the study of colloidal self-assembly.

Flower-strucutre deformation pattern of theTian Shan mountains as revealed by Late Quaternary geological and modern Geodesy slip rates

NASA Astrophysics Data System (ADS)

Wu, C.; Zhang, P.; Zheng, W.; Wang, H.; Zhang, Z.; Ren, Z.; Zheng, D.; Yu, J.; Wu, G.

2017-12-01

The deformation pattern and strain distribution of the Tian Shan is a hot issue.Previous studies mainly focus on the thrust-fold systems on both sides of Tian Shan, the strike-slip faults within the mountains are rarely reported. The understanding about the deformation characteristics of Tian Shan is not complete for lacking information of these strike-slip faults.Our studies show the NEE trending structures of Maidan fault and Nalati fault in the southwestern Tian Shan are all active during the Holence. These faults are characterized by sinistral strike-slip and thrust movement. The minimum average sinistral strike-slip rate of the Maidan fault is 1.07 ± 0.13 mm/yr. During the late Quaternary, the average shortening rate and sinistral strike-slip rate of the Nalati fault are 2.1 ±0.4 mm/yr and 2.56 ±0.25 mm/yr, respectively . In the interior of the Tian Shan area, two groups of strike-slip faults were developed. The NEE trending faults with sinistral strike-slipmovement, and the NWW trending faults with dextral strike-slip movement show the shape of "X"in geometrical structure. The piedmont thrust faults and the thrust strike-slip faults in the interior mountain constitute the tectonic framework of Tian Shan. Threegroups of active fault systems are the main seismogenic and geological structures, which control the current tectonic deformation pattern of Tian Shan (Figure 1). GPS observation data also showthe similar deformation characteristics with the geological results (Figures 2, 3). In addition to the crustal shortening, there is a certain strike-slip shear movement in the interior of the Tian Shan.The strike-slip rate defined by the geological and GPS data is approximately consistent with each other near the same longitude. We suggest the two groups of strike-slip faults in the interior of mountains is a set of conjugate structures. The whole Tian Shan forms a large flower-structure in a profile view. The complete tectonic deformation of the Tian Shan mountains consists ofthe shortening deformationof the N-S direction and the lateral extrusion of the E-W direction (Figure 2). The late Cenozoic deformation of the Tian Shan mountains is due to the northward subduction of Tarim Block. Although the activedeformation of the Tian Shan decrease eastward, the geological sturcutrein eastern Tian Shan is similar.

Aspects of Non-Newtonian Viscoelastic Deformation Produced by Slip on a Major Strike- slip Fault

NASA Astrophysics Data System (ADS)

Postek, E. W.; Houseman, G. A.; Jimack, P. K.

2008-12-01

Non-Newtonian flow occurs in crustal deformation processes on the long timescales associated with large- scale continental deformation, and also on the short time-scales associated with post-seismic deformation. The co-seismic displacement is determined by the instantaneous elastic response of the rocks on either side of the fault surface to the distribution of slip on the surface of the fault. The post-seismic deformation is determined by some combination of visco-elastic relaxation of the medium and post-seismic creep on the fault. The response of the crust may depend on elastic moduli, Poisson's ratio, temperature, pressure and creep function parameters including stress exponent, activation energy, activation volume and viscosity coefficient. We use the von Mises function in describing the non-linear Maxwell visco-elastic creep models. In this study we examine a model of a strike-slip fault crossing a 3D block. The fault slips at time zero, and we solve for the viscoelastic deformation field throughout the 3D volume using a 3D finite element method. We perform parametric studies on the constitutive equation by varying these parameters and the depth of the fault event. Our findings are focused on the fact that the system is very sensitive to the above mentioned parameters. In particular, the most important seems to be the temperature profiles and stress exponent. The activation energy and the pressure are of lower importance, however, they have their meaning. We investigated the relaxation times and the deformation patterns. We took the material properties as typical to dry quartzite and diabase. Depending on the parameters the surface can be deformed permanently or the deformation can decrease. We attempt to compare qualitatively the calculated post-seismic response in terms of the post-seismic displacement history of the earth's surface with InSAR patterns determined from recent major strike-slip earthquakes. Quantitative comparison of the observations with these numerical model results can in principle provide a better understanding of the physical properties of the sub-surface and further insight into the diagnostic properties of the earthquake cycles of major fault systems.

Large-scale diversity of slope fishes: pattern inconsistency between multiple diversity indices.

PubMed

Gaertner, Jean-Claude; Maiorano, Porzia; Mérigot, Bastien; Colloca, Francesco; Politou, Chrissi-Yianna; Gil De Sola, Luis; Bertrand, Jacques A; Murenu, Matteo; Durbec, Jean-Pierre; Kallianiotis, Argyris; Mannini, Alessandro

2013-01-01

Large-scale studies focused on the diversity of continental slope ecosystems are still rare, usually restricted to a limited number of diversity indices and mainly based on the empirical comparison of heterogeneous local data sets. In contrast, we investigate large-scale fish diversity on the basis of multiple diversity indices and using 1454 standardized trawl hauls collected throughout the upper and middle slope of the whole northern Mediterranean Sea (36°3'- 45°7' N; 5°3'W - 28°E). We have analyzed (1) the empirical relationships between a set of 11 diversity indices in order to assess their degree of complementarity/redundancy and (2) the consistency of spatial patterns exhibited by each of the complementary groups of indices. Regarding species richness, our results contrasted both the traditional view based on the hump-shaped theory for bathymetric pattern and the commonly-admitted hypothesis of a large-scale decreasing trend correlated with a similar gradient of primary production in the Mediterranean Sea. More generally, we found that the components of slope fish diversity we analyzed did not always show a consistent pattern of distribution according either to depth or to spatial areas, suggesting that they are not driven by the same factors. These results, which stress the need to extend the number of indices traditionally considered in diversity monitoring networks, could provide a basis for rethinking not only the methodological approach used in monitoring systems, but also the definition of priority zones for protection. Finally, our results call into question the feasibility of properly investigating large-scale diversity patterns using a widespread approach in ecology, which is based on the compilation of pre-existing heterogeneous and disparate data sets, in particular when focusing on indices that are very sensitive to sampling design standardization, such as species richness.

Cenozoic dynamics of shallow-marine biodiversity in the Western Pacific

NASA Astrophysics Data System (ADS)

Yasuhara, M.; Iwatani, H.; Hunt, G.; Okahashi, H.; Kase, T.; Hayashi, H.; Irizuki, T.; Aguilar, Y. M.; Fernando, A. G. S.; Renema, W.

2016-12-01

Cenozoic dynamics of large-scale species diversity patterns remain poorly understood, especially for the Western Pacific, in part because of the paucity of well-dated fossil records from the tropics. Here we show the spatiotemporal dynamics of species diversity in the Western Pacific through the Cenozoic, focusing on the tropical Indo-Australian Archipelago (IAA) biodiversity hotspot. We analysed well-preserved fossil ostracodes from the tropical Western Pacific and combined their diversity data with other published data from the region to reconstruct Cenozoic dynamics of species diversity in the tropical- and northwestern Pacific Ocean. We fit generalized additive models to test for differences in richness over time and across geographic regions while accounting for sample size variation among samples. Low-, mid- and high-latitude regions all show a similar diversity trajectory: diversity is low in the Eocene and Oligocene, increases from the Early Miocene to the Plio-Pleistocene but then declines to the present day. Present day high biodiversity in these regions was established during the Pliocene with a remarkable diversification at that time. Latitudinal diversity patterns are relatively flat and never show as simple decline from the tropics to higher latitudes. Western Pacific Cenozoic ostracodes exhibit a spatiotemporal pattern of species diversity that is inconsistent with the commonly reported and persistent pattern of declining diversity from the tropics to the extratropics. While this inconsistency could be interpreted as evidence that ostracodes are a contrarian clade, Atlantic ostracodes display a standard latitudinal species diversity gradient. Contrasting patterns between oceans suggests an important role for regional factors (e.g., plate tectonics and temporal geomorphological dynamics) in shaping the biodiversity of the Western Pacific.

Migmatites to mylonites - Crustal deformation mechanisms in the Western Gneiss Region, Norway

NASA Astrophysics Data System (ADS)

Lee, A. L.; Torvela, T.; Lloyd, G. E.; Walker, A.

2016-12-01

Strain and fluids localise into shear zones while crustal blocks remain comparatively dry, rigid and deform less. However when H2O is present in the crustal blocks they start to melt, deformation becomes more distributed and is no longer strongly localised into the weak shear zones. Using examples from the Western Gneiss Region (WGR), Norway, we show the deformation characteristics when mylonitic shear zones and migmatites coexist. The WGR is the lowest structural level of the Caledonian Orogeny, exposing Silurian to Devonian metamorphism and deformation of the Precambrian crust. WGR is predominantly composed of amphibolite-facies quartzofeldspathic gneiss that has undergone partial melting. This study focuses on the southwestern peninsula of the island of Gurskøy. Over a 1.2 kilometre section there is a diverse deformation sequence of migmatized gneiss, mylonitic shear zones, sillimanite bearing garnet-mica schists, augen gneiss and boudinaged amphibolite dykes resulting in a large competence differences between the lithologies over the area. The strongly deformed mylonitic shear zones extend from 5 to over 100 meters in width, but deformation is also high in the migmatitic layers as shown from S-C fabrics and isoclinal folding of leucratic and restitic layers. Microstructural evidence of dynamic recrystallization, symplectite textures and magmatic flow show deformation is widespread over the peninsula. Strain localisation, melting, and their interactions are shown by a combination of outcrop and quantitative modelling that uses field data, microstructural analysis, crystallographic preferred orientations and numerical Eshelby modelling. Detailed field mapping and microstructural analysis of samples from across the peninsula allows melt quantification and thus an understanding of strain mechanisms when melt is present. This area is important as it shows the heterogeneity of deformation within the partially melted lower crust on the sub-seismic scale.

High-speed measurements of steel-plate deformations during laser surface processing.

PubMed

Jezersek, Matija; Gruden, Valter; Mozina, Janez

2004-10-04

In this paper we present a novel approach to monitoring the deformations of a steel plate's surface during various types of laser processing, e.g., engraving, marking, cutting, bending, and welding. The measuring system is based on a laser triangulation principle, where the laser projector generates multiple lines simultaneously. This enables us to measure the shape of the surface with a high sampling rate (80 Hz with our camera) and high accuracy (+/-7 microm). The measurements of steel-plate deformations for plates of different thickness and with different illumination patterns are presented graphically and in an animation.

Characteristic point algorithm in laser ektacytometry of red blood cells

NASA Astrophysics Data System (ADS)

Nikitin, S. Yu.; Ustinov, V. D.

2018-01-01

We consider the problem of measuring red blood cell deformability by laser diffractometry in shear flow (ektacytometry). A new equation is derived that relates the parameters of the diffraction pattern to the width of the erythrocyte deformability distribution. The numerical simulation method shows that this equation provides a higher accuracy of measurements in comparison with the analogous equation obtained by us earlier.

Estimating Tunnel Strain in the Weak and Schistose Rock Mass Influenced by Stress Anisotropy: An Evaluation Based on Three Tunnel Cases from Nepal

NASA Astrophysics Data System (ADS)

Panthi, Krishna Kanta; Shrestha, Pawan Kumar

2018-06-01

Total plastic deformation in tunnels passing through weak and schistose rock mass consists of both time-independent and time-dependent deformations. The extent of this total deformation is heavily influenced by the rock mass deformability properties and in situ stress condition prevailing in the area. If in situ stress is not isotropic, the deformation magnitude is not only different along the longitudinal alignment but also along the periphery of the tunnel wall. This manuscript first evaluates the long-term plastic deformation records of three tunnel projects from the Nepal Himalaya and identifies interlink between the time-independent and time-dependent deformations using the convergence law proposed by Sulem et al. (Int J Rock Mech Min Sci Geomech 24(3):145-154, 1987a, Int J Rock Mech Min Sci Geomech 24(3):155-164, 1987b). Secondly, the manuscript attempts to establish a correlation between plastic deformations (tunnel strain) and rock mass deformable properties, support pressure and in situ stress conditions. Finally, patterns of time-independent and time-dependent plastic deformations are also evaluated and discussed. The long-term plastic deformation records of 24 tunnel sections representing four different rock types of three different headrace tunnel cases from Nepal Himalaya are extensively used in this endeavor. The authors believe that the proposed findings will be a step further in analysis of plastic deformations in tunnels passing through weak and schistose rock mass and along the anisotropic stress conditions.

Estimating Earthquake Magnitude from the Kentucky Bend Scarp in the New Madrid Seismic Zone Using Field Geomorphic Mapping and High-Resolution LiDAR Topography

NASA Astrophysics Data System (ADS)

Kelson, K. I.; Kirkendall, W. G.

2014-12-01

Recent suggestions that the 1811-1812 earthquakes in the New Madrid Seismic Zone (NMSZ) ranged from M6.8-7.0 versus M8.0 have implications for seismic hazard estimation in the central US. We more accurately identify the location of the NW-striking, NE-facing Kentucky Bend scarp along the northern Reelfoot fault, which is spatially associated with the Lake County uplift, contemporary seismicity, and changes in the Mississippi River from the February 1812 earthquake. We use 1m-resolution LiDAR hillshades and slope surfaces, aerial photography, soil surveys, and field geomorphic mapping to estimate the location, pattern, and amount of late Holocene coseismic surface deformation. We define eight late Holocene to historic fluvial deposits, and delineate younger alluvia that are progressively inset into older deposits on the upthrown, western side of the fault. Some younger, clayey deposits indicate past ponding against the scarp, perhaps following surface deformational events. The Reelfoot fault is represented by sinuous breaks-in-slope cutting across these fluvial deposits, locally coinciding with shallow faults identified via seismic reflection data (Woolery et al., 1999). The deformation pattern is consistent with NE-directed reverse faulting along single or multiple SW-dipping fault planes, and the complex pattern of fluvial deposition appears partially controlled by intermittent uplift. Six localities contain scarps across correlative deposits and allow evaluation of cumulative surface deformation from LiDAR-derived topographic profiles. Displacements range from 3.4±0.2 m, to 2.2±0.2 m, 1.4±0.3 m, and 0.6±0.1 m across four progressively younger surfaces. The spatial distribution of the profiles argues against the differences being a result of along-strike uplift variability. We attribute the lesser displacements of progressively younger deposits to recurrent surface deformation, but do not yet interpret these initial data with respect to possible earthquake magnitudes. Additional efforts hopefully will address shallow subsurface evidence of single- or multiple-deformational events at selected localities.

Modelling of The Dyke Emplacement Leading To The Etna July 2001 Eruption Through Continuous Tilt and GPS Data

NASA Astrophysics Data System (ADS)

Bonaccorso, A.; Aloisi, M.; Mattia, A.

During the June 2001 eruption of Mt. Etna the continuous ground deformation mon- itoring have been recorded through tilt (9 stations) and GPS (11 stations) permanent networks. The evolution of the July crisis preceding and leading to the eruption has been monitored through the tilt and GPS continuous measurements, which constrained in time the final intrusion and inferred the position and geometry of the uprising dyke. The tilt signals, which record 48 samples/day, fixed the time action of the intrusion, whose main effects are recorded during 13-15 July in concomitance with the first days of the seismic crisis. In particular, the high precision long-base mercury tiltmeter, in- stalled at Pizzi Deneri observatory in the high north-eastern flank close to the crater area, showed very well the continuous deformation during the dyke emplacement. The deformation pattern, at the entire volcano scale, was well characterised by the daily measurement sessions recorded at the GPS permanent network. The variations recorded at the permanent GPS stations started from July 13 and, in agreement with tilt recordings, were mainly cumulated in the following two days. The GPS measurements showed horizontal displacement vectors much bigger than vertical changes. The defor- mation pattern indicates the response to a tensile mechanisms that appears compatible with an intrusion in the volcano edifice along a ca. N-S direction. In this poster we show the modelling of the marked ground deformation changes recorded in the days before the eruption starting. The first results show that a tensile crack with an opening dislocation of ~3 m. and crossing the entire edifice, south-west to the crater area, can explain the recorded deformation pattern. The location of the modelled tensile source fits the seismogenetic zone characterized by epicenters aligned in a ca. N-S direction with the foci clustered in the last shallow kilometers. The ground deformation pat- tern associated with the final uprising and its modelling suggest a dyke emplacement which appears different, both in terms of velocity and source position, with respect to the sources modelled for the other lateral eruptions in the previous twenty years.

Computed Tomography 3-D Imaging of the Metal Deformation Flow Path in Friction Stir Welding

NASA Technical Reports Server (NTRS)

Schneider, Judy; Beshears, Ronald; Nunes, Arthur C., Jr.

2005-01-01

In friction stir welding (FSW), a rotating threaded pin tool is inserted into a weld seam and literally stirs the edges of the seam together. To determine optimal processing parameters for producing a defect free weld, a better understanding of the resulting metal deformation flow path is required. Marker studies are the principal method of studying the metal deformation flow path around the FSW pin tool. In our study, we have used computed tomography (CT) scans to reveal the flow pattern of a lead wire embedded in a FSW weld seam. At the welding temperature of aluminum, the lead becomes molten and is carried with the macro-flow of the weld metal. By using CT images, a 3-dimensional (3D) image of the lead flow pattern can be reconstructed. CT imaging was found to be a convenient and comprehensive way of collecting and displaying tracer data. It marks an advance over previous more tedious and ambiguous radiographic/metallographic data collection methods.

Human motion analysis with detection of subpart deformations

NASA Astrophysics Data System (ADS)

Wang, Juhui; Lorette, Guy; Bouthemy, Patrick

1992-06-01

One essential constraint used in 3-D motion estimation from optical projections is the rigidity assumption. Because of muscle deformations in human motion, this rigidity requirement is often violated for some regions on the human body. Global methods usually fail to bring stable solutions. This paper presents a model-based approach to combating the effect of muscle deformations in human motion analysis. The approach developed is based on two main stages. In the first stage, the human body is partitioned into different areas, where each area is consistent with a general motion model (not necessarily corresponding to a physical existing motion pattern). In the second stage, the regions are eliminated under the hypothesis that they are not induced by a specific human motion pattern. Each hypothesis is generated by making use of specific knowledge about human motion. A global method is used to estimate the 3-D motion parameters in basis of valid segments. Experiments based on a cycling motion sequence are presented.

Measurement of thermal deformation of an engine piston using a conical mirror and ESPI

NASA Astrophysics Data System (ADS)

Albertazzi, Armando, Jr.; Melao, Iza; Devece, Eugenio

1998-07-01

An experimental technique is developed to measure the radial displacement component of cylindrical surfaces using a conical mirror for normal illumination and observation. Single illumination ESPI is used to obtain fringe patterns related to the radial displacement field. Some data processing strategies are presented and discussed to properly extract the measurement data. Data reduction algorithms are developed to quantify and compensate the rigid body displacements: translations and rotations. The displacement component responsible for shape distortion (deformation) can be separated from the total displacement field. The thermal radial deformation of an aluminum engine piston with a steel sash is measured by this technique. A temperature change of about 2 degrees Celsius was applied to the engine piston by means of an electrical wire wrapped up in the first engine piston grove. The fringe patterns are processed and the results are presented as polar graphics and 3D representation. The main advantages and limitations of the developed technique are discussed.

Genetic Diversity on the Sex Chromosomes

PubMed Central

Wilson Sayres, Melissa A

2018-01-01

Abstract Levels and patterns of genetic diversity can provide insights into a population’s history. In species with sex chromosomes, differences between genomic regions with unique inheritance patterns can be used to distinguish between different sets of possible demographic and selective events. This review introduces the differences in population history for sex chromosomes and autosomes, provides the expectations for genetic diversity across the genome under different evolutionary scenarios, and gives an introductory description for how deviations in these expectations are calculated and can be interpreted. Predominantly, diversity on the sex chromosomes has been used to explore and address three research areas: 1) Mating patterns and sex-biased variance in reproductive success, 2) signatures of selection, and 3) evidence for modes of speciation and introgression. After introducing the theory, this review catalogs recent studies of genetic diversity on the sex chromosomes across species within the major research areas that sex chromosomes are typically applied to, arguing that there are broad similarities not only between male-heterogametic (XX/XY) and female-heterogametic (ZZ/ZW) sex determination systems but also any mating system with reduced recombination in a sex-determining region. Further, general patterns of reduced diversity in nonrecombining regions are shared across plants and animals. There are unique patterns across populations with vastly different patterns of mating and speciation, but these do not tend to cluster by taxa or sex determination system. PMID:29635328

Inflation-predictable behavior and co-eruption deformation at Axial Seamount.

PubMed

Nooner, Scott L; Chadwick, William W

2016-12-16

Deformation of the ground surface at active volcanoes provides information about magma movements at depth. Improved seafloor deformation measurements between 2011 and 2015 documented a fourfold increase in magma supply and confirmed that Axial Seamount's eruptive behavior is inflation-predictable, probably triggered by a critical level of magmatic pressure. A 2015 eruption was successfully forecast on the basis of this deformation pattern and marked the first time that deflation and tilt were captured in real time by a new seafloor cabled observatory, revealing the timing, location, and volume of eruption-related magma movements. Improved modeling of the deformation suggests a steeply dipping prolate-spheroid pressure source beneath the eastern caldera that is consistent with the location of the zone of highest melt within the subcaldera magma reservoir determined from multichannel seismic results. Copyright © 2016, American Association for the Advancement of Science.

Simultaneous acquisition of 3D shape and deformation by combination of interferometric and correlation-based laser speckle metrology.

PubMed

Dekiff, Markus; Berssenbrügge, Philipp; Kemper, Björn; Denz, Cornelia; Dirksen, Dieter

2015-12-01

A metrology system combining three laser speckle measurement techniques for simultaneous determination of 3D shape and micro- and macroscopic deformations is presented. While microscopic deformations are determined by a combination of Digital Holographic Interferometry (DHI) and Digital Speckle Photography (DSP), macroscopic 3D shape, position and deformation are retrieved by photogrammetry based on digital image correlation of a projected laser speckle pattern. The photogrammetrically obtained data extend the measurement range of the DHI-DSP system and also increase the accuracy of the calculation of the sensitivity vector. Furthermore, a precise assignment of microscopic displacements to the object's macroscopic shape for enhanced visualization is achieved. The approach allows for fast measurements with a simple setup. Key parameters of the system are optimized, and its precision and measurement range are demonstrated. As application examples, the deformation of a mandible model and the shrinkage of dental impression material are measured.

Angular Deformities of the Lower Limb in Children

PubMed Central

Espandar, Ramin; Mortazavi, Seyed Mohammad-Javad; Baghdadi, Taghi

2010-01-01

Angular deformities of the lower limbs are common during childhood. In most cases this represents a variation in the normal growth pattern and is an entirely benign condition. Presence of symmetrical deformities and absence of symptoms, joint stiffness, systemic disorders or syndromes indicates a benign condition with excellent long-term outcome. In contrast, deformities which are asymmetrical and associated with pain, joint stiffness, systemic disorders or syndromes may indicate a serious underlying cause and require treatment. Little is known about the relationship between sport participation and body adaptations during growth. Intense soccer participation increases the degree of genu varum in males from the age of 16. Since, according to some investigations, genu varum predisposes individuals to more injuries, efforts to reduce the development of genu varum in soccer players are warranted. In this article major topics of angular deformities of the knees in pediatric population are practically reviewed. PMID:22375192

Black hole acoustics in the minimal geometric deformation of a de Laval nozzle

NASA Astrophysics Data System (ADS)

da Rocha, Roldão

2017-05-01

The correspondence between sound waves, in a de Laval propelling nozzle, and quasinormal modes emitted by brane-world black holes deformed by a 5D bulk Weyl fluid are here explored and scrutinized. The analysis of sound waves patterns in a de Laval nozzle in the laboratory, reciprocally, is here shown to provide relevant data about the 5D bulk Weyl fluid and its on-brane projection, comprised by the minimal geometrically deformed compact stellar distribution on the brane. Acoustic perturbations of the gas fluid flow in the de Laval nozzle are proved to coincide with the quasinormal modes of black holes solutions deformed by the 5D Weyl fluid, in the geometric deformation procedure. Hence, in a phenomenological Eötvös-Friedmann fluid brane-world model, the realistic shape of a de Laval nozzle is derived and its consequences studied.

Patterns of folding and fold interference in oblique contraction of layered rocks of the inverted Cobar Basin, Australia

NASA Astrophysics Data System (ADS)

Smith, J. V.; Marshall, B.

1992-12-01

The inverted Cobar Basin, within the Lachlan Fold Belt of New South Wales, Australia, comprises a mid-Palaeozoic cover sequence, originally deposited in a NNW-trending basin. The pattern of F 1 folding in the layered cover rocks changes from east to west; from tight well-cleaved folds parallel to the NNW-trending basin margin on the east, to open poorly cleaved en echelon folds at about 35° to the margin, further to the west. The change in fold trend and strain intensity has been repeatedly ascribed to the differing behaviour of discrete zones, decoupled across a north-trending strike-slip fault boundary. New field data show that the changes in orientation and strain intensity of F 1 structures are progressively developed, that an abrupt boundary between discrete zones cannot be substantiated, and that interpretations involving decoupled blocks are not supported by the evidence. Conversely, the data require coherent behaviour across the basin, such that the overall pattern of F 1 folding must be explained by strain compatible processes. This new interpretation of the F 1 deformation pattern has been modelled and quantitatively analysed. Theoretical predictions of the orientation of structures in unlayered isotropic material undergoing oblique contraction are inapplicable to layered anisotropic material. The style of deformation in layered material will reflect the interaction of the bulk strain pattern due to convergence together with the influence of the layering anisotropy. The orientations of the finite strain axes inferred from the folding need not match those of the bulk deformation; the amount of strain recorded by folding may be unrepresentative of that developed in the deformed tract. Oblique contraction at a range of convergence angles was simulated by models employing layers of wet tissue paper. Quantitative analysis of the strain patterns in this layered anisotropic material showed consistent departures from the theoretical predictions for isotropic material. The orientations of the principal finite horizontal extension proximal to the margin yielded higher convergence angles than those which were imposed; the orientations distal from the margin yielded substantially lower apparent convergence angles. This is because the layering anisotropy results in tight folds dissipating the normal component of the oblique convergence vector close to the margin. Whereas more open structures further from the margin show orientations controlled by the progressively more dominant shear component of the vergence vector. Modelling of D 1 the Cobar Basin shows that the F 1 pattern is consistent with dextral oblique convergence at 60° to the eastern margin of the basin. The deformation patterns, in both the model and the Cobar Basin, yield higher proximal and substantially lower distal apparent convergence angles. This is as expected from theoretical considerations and quantitative analysis of oblique contraction over a range of convergence angles. The rheological anisotropy of the cover sequence of the basin is replicated by that of the layered wet tissue paper. Wet-tissue modelling of the superposition of the second period of deformation (D 2) on F 1 demonstrates the way in which the tightness and orientation of early folds influence the type of fold interference pattern. At the eastern margin of the Cobar Basin, where D 1 was most intense, this resulted in major swings of the strike of bedding and cleavage, and of the trend of F 1 folds. Further west, open basin and dome patterns developed where D 1 was least intense. Principles developed in relation to the inversion of the Cobar Basin, are equally applicable to other basins in which layered cover rocks have undergone inversion by oblique contraction. Many basins in the Lachlan Fold Belt and in general would fall within this category.

Reciprocal relationships and potential feedbacks between biodiversity and disturbance.

PubMed

Hughes, A Randall; Byrnes, Jarrett E; Kimbro, David L; Stachowicz, John J

2007-09-01

Two major foci of ecological research involve reciprocal views of the relationship between biodiversity and disturbance: disturbance determines community diversity or diversity determines realized disturbance severity. Here, we present an initial attempt to synthesize these two approaches in order to understand whether feedbacks occur, and what their effects on patterns of diversity might be. Our review of published experiments shows that (i) disturbance severity can be both a cause and a consequence of local diversity in a wide range of ecosystems and (ii) shapes of the unidirectional relationships between diversity and disturbance can be quite variable. To explore how feedbacks between diversity and disturbance might operate to alter expected patterns of diversity in nature, we develop and then evaluate a conceptual model that decomposes the relationships into component parts, considering sequentially the effect of diversity on disturbance severity, and the effect of realized disturbance on diversity loss, subsequent recruitment, and competitive exclusion. Our model suggests that feedbacks can increase mean values of richness, decrease variability, and alter the patterns of correlation between diversity and disturbance in nature. We close by offering ideas for future research to help fill gaps in our understanding of reciprocal relationships among ecological variables like diversity and disturbance.

Patterns of Gram-stained fecal flora as a quick diagnostic marker in patients with severe SIRS.

PubMed

Shimizu, Kentaro; Ogura, Hiroshi; Tomono, Kazunori; Tasaki, Osamu; Asahara, Takashi; Nomoto, Koji; Morotomi, Masami; Matsushima, Asako; Nakahori, Yasutaka; Yamano, Shuhei; Osuka, Akinori; Kuwagata, Yasuyuki; Sugimoto, Hisashi

2011-06-01

The gut is an important target organ of injury during critically ill conditions. Although Gram staining is a common and quick method for identifying bacteria, its clinical application has not been fully evaluated in critically ill conditions. This study's aims were to identify patterns of Gram-stained fecal flora and compare them to cultured bacterial counts and to investigate the association between the patterns and septic complications in patients with severe systemic inflammatory response syndrome (SIRS). Fifty-two patients with SIRS were included whose Gram-stained fecal flora was classified into three patterns. In a diverse pattern, large numbers of multiple kinds of bacteria completely covered the field. In a single pattern, one specific kind of bacteria or fungi predominantly covered the field. In a depleted pattern, most bacteria were diminished in the field. In the analysis of fecal flora, the numbers of total obligate anaerobes in the depleted pattern was significantly lower than those in the diverse pattern and single pattern (p < 0.05). The concentrations of total organic acids, acetic acid, and propionic acid in the depleted pattern were significantly lower than those in diverse pattern and single pattern (p < 0.05). Mortality due to multiple organ dysfunction syndrome for the single pattern (52%) and the depleted pattern (64%) was significantly higher than that for the diverse pattern (6%) (p < 0.05). Gram-stained fecal flora can be classified into three patterns and are associated with both cultured bacterial counts and clinical information. Gram-stained fecal bacteria can be used as a quick bedside diagnostic marker for severe SIRS patients.

Factors influencing geographic patterns in diversity of forest bird communities of eastern Connecticut, USA

USGS Publications Warehouse

Craig, Robert J.; Klaver, Robert W.

2012-01-01

At regional scales, the most important variables associated with diversity are latitudinally-based temperature and net primary productivity, although diversity is also influenced by habitat. We examined bird species richness, community density and community evenness in forests of eastern Connecticut to determine whether: 1) spatial and seasonal patterns exist in diversity, 2) energy explains the greatest proportion of variation in diversity parameters, 3) variation in habitat explains remaining diversity variance, and 4) seasonal shifts in diversity provide clues about how environmental variables shape communities. We sought to discover if our data supported predictions of the species–energy hypothesis. We used the variable circular plot technique to estimate bird populations and quantified the location, elevation, forest type, vegetation type, canopy cover, moisture regime, understory density and primary production for the study sites. We found that 1) summer richness and population densities are roughly equal in northeastern and southeastern Connecticut, whereas in winter both concentrate toward the coast, 2) variables linked with temperature explained much of the patterns in winter diversity, but energy-related variables showed little relationship to summer diversity, 3) the effect of habitat variables on diversity parameters predominated in summer, although their effect was weak, 4) contrary to theory, evenness increased from summer to winter, and 5) support for predictions of species–energy theory was primarily restricted to winter data. Although energy and habitat played a role in explaining community patterns, they left much of the variance in regional diversity unexplained, suggesting that a large stochastic component to diversity also may exist.

Effect of different stages of deformation on the microstructure evolution of Ti-rich NiTi shape memory alloy

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tadayyon, Ghazal, E-mail: Ghazal.tadayyon@gmail.co

The main objective of this work was to investigate the thermomechanical behavior and microstructural changes of a Ti-rich NiTi shape memory alloy (SMA). The microstructural and texture evolution of aged NiTi alloy at different degrees of deformation were elicited by transmission electron microscopy (TEM). An effort was made to correlate results obtained from the tensile test with results from microstructure studies. The undeformed sample reveals a self-accommodated morphology with straight and well defined twin boundaries. At different stages of deformation, diverse mechanisms were involved. These mechanisms include marstraining, detwinning accompanied by dislocation movement, and finally, severe plastic deformation, subdivision andmore » amorphization of the matrix. Under increasing strains, high density lattice defects were generated and the morphology of B19’ became disordered. - Graphical abstract: The summary of microstructure changes of the martensite twins during tensile deformation in polycrystalline NiTi SMAs. - Highlights: • Initial elastic response, dislocation avalanche and deformation bands were studied. • < 011 > Type II twin accompanied by detwinned area after 2% cold work was observed. • Visible parallel fine stacking faults showed plastic flow of the material. • At higher strains, subgrains changed to recrystallized, finely amorphous structure.« less

Numerical modeling of the Indo-Australian intraplate deformation

NASA Astrophysics Data System (ADS)

Brandon, Vincent; Royer, Jean-Yves

2014-05-01

The Indo-Australian plate is perhaps the best example of wide intraplate deformation within an oceanic plate. The deformation is expressed by an unusual level of intraplate seismicity, including magnitude Mw > 8 events, large-scale folding and deep faulting of the oceanic lithosphere and reactivation of extinct fracture zones. The deformation pattern and kinematic data inversions suggest that the Indo-Australian plate can be viewed as a composite plate made of three rigid component plates - India, Capricorn, Australia - separated by wide and diffuse boundaries undergoing either extensional or compressional deformation. We tested this model using the SHELLS numerical code (Kong & Bird, 1995). The Indo-Australian plate is modeled by a mesh of 5281 spherical triangular finite elements. Mesh edges parallel the major extinct fracture zones so that they can be reactivated by reducing their friction rates. Strength of the plate is defined by the age of the lithosphere and seafloor topography. Model boundary conditions are only defined by the plate velocities predicted by the rotation vectors between rigid components of the Indo-Australian plate and their neighboring plates. Since the mesh limits all belong to rigid plates with fully defined Euler vectors, no conditions are imposed on the location, extent and limits of the diffuse and deforming zones. Using MORVEL plate velocities (DeMets et al., 2010), predicted deformation patterns are very consistent with that observed. Pre-existing structures of the lithosphere play an important role in the intraplate deformation and its distribution. The Chagos Bank focuses most of the extensional deformation between the Indian and Capricorn plates. Agreement between models and observation improves by weakening fossil fracture zones relative to the surrounding crust; however only limited sections of FZ's accommodate deformation. The reactivation of the Eocene FZ's in the Central Indian Basin (CIB) and Wharton Basin (WB) explains the drastic change in the deformation style between these basins across the Ninetyeast ridge. The highest slip rates along the WB FZ's are predicted where two major strike-slip faulting earthquakes occurred in April 2012 (Mw=8.6 and 8.2). The best model is obtained when adding a local HF anomaly in the center of the CIB (proxy for weakening the lithospheric strength), consistent with evidence of mantle serpentinization in the CIB where deep seismics image a series of N-S dipping thrust faults reaching Moho depths. The rates of extension or shortening, inferred from the predicted strain rates, are consistent with previous estimates based on different approaches. This finite element modeling confirms that oceanic lithosphere, like the continental lithosphere, can slowly deform over very broad areas (> 1000 x 1000 km).

Historical factors shaped species diversity and composition of Salix in eastern Asia.

PubMed

Wang, Qinggang; Su, Xiangyan; Shrestha, Nawal; Liu, Yunpeng; Wang, Siyang; Xu, Xiaoting; Wang, Zhiheng

2017-02-08

Ambient energy, niche conservatism, historical climate stability and habitat heterogeneity hypothesis have been proposed to explain the broad-scale species diversity patterns and species compositions, while their relative importance have been controversial. Here, we assessed the relative contributions of contemporary climate, historical climate changes and habitat heterogeneity in shaping Salix species diversity and species composition in whole eastern Asia as well as mountains and lowlands using linear regressions and distance-based redundancy analyses, respectively. Salix diversity was negatively related with mean annual temperature. Habitat heterogeneity was more important than contemporary climate in shaping Salix diversity patterns, and their relative contributions were different in mountains and lowlands. In contrast, the species composition was strongly influenced by contemporary climate and historical climate change than habitat heterogeneity, and their relative contributions were nearly the same both in mountains and lowlands. Our findings supported niche conservatism and habitat heterogeneity hypotheses, but did not support ambient energy and historical climate stability hypotheses. The diversity pattern and species composition of Salix could not be well-explained by any single hypothesis tested, suggesting that other factors such as disturbance history and diversification rate may be also important in shaping the diversity pattern and composition of Salix species.

Historical factors shaped species diversity and composition of Salix in eastern Asia

PubMed Central

Wang, Qinggang; Su, Xiangyan; Shrestha, Nawal; Liu, Yunpeng; Wang, Siyang; Xu, Xiaoting; Wang, Zhiheng

2017-01-01

Ambient energy, niche conservatism, historical climate stability and habitat heterogeneity hypothesis have been proposed to explain the broad-scale species diversity patterns and species compositions, while their relative importance have been controversial. Here, we assessed the relative contributions of contemporary climate, historical climate changes and habitat heterogeneity in shaping Salix species diversity and species composition in whole eastern Asia as well as mountains and lowlands using linear regressions and distance-based redundancy analyses, respectively. Salix diversity was negatively related with mean annual temperature. Habitat heterogeneity was more important than contemporary climate in shaping Salix diversity patterns, and their relative contributions were different in mountains and lowlands. In contrast, the species composition was strongly influenced by contemporary climate and historical climate change than habitat heterogeneity, and their relative contributions were nearly the same both in mountains and lowlands. Our findings supported niche conservatism and habitat heterogeneity hypotheses, but did not support ambient energy and historical climate stability hypotheses. The diversity pattern and species composition of Salix could not be well-explained by any single hypothesis tested, suggesting that other factors such as disturbance history and diversification rate may be also important in shaping the diversity pattern and composition of Salix species. PMID:28176816

Derivation of simple rules for complex flow vector fields on the lower part of the human face for robot face design.

PubMed

Ishihara, Hisashi; Ota, Nobuyuki; Asada, Minoru

2017-11-27

It is quite difficult for android robots to replicate the numerous and various types of human facial expressions owing to limitations in terms of space, mechanisms, and materials. This situation could be improved with greater knowledge regarding these expressions and their deformation rules, i.e. by using the biomimetic approach. In a previous study, we investigated 16 facial deformation patterns and found that each facial point moves almost only in its own principal direction and different deformation patterns are created with different combinations of moving lengths. However, the replication errors caused by moving each control point of a face in only their principal direction were not evaluated for each deformation pattern at that time. Therefore, we calculated the replication errors in this study using the second principal component scores of the 16 sets of flow vectors at each point on the face. More than 60% of the errors were within 1 mm, and approximately 90% of them were within 3 mm. The average error was 1.1 mm. These results indicate that robots can replicate the 16 investigated facial expressions with errors within 3 mm and 1 mm for about 90% and 60% of the vectors, respectively, even if each point on the robot face moves in only its own principal direction. This finding seems promising for the development of robots capable of showing various facial expressions because significantly fewer types of movements than previously predicted are necessary.

Population-genomic variation within RNA viruses of the Western honey bee, Apis mellifera, inferred from deep sequencing

PubMed Central

2013-01-01

Background Deep sequencing of viruses isolated from infected hosts is an efficient way to measure population-genetic variation and can reveal patterns of dispersal and natural selection. In this study, we mined existing Illumina sequence reads to investigate single-nucleotide polymorphisms (SNPs) within two RNA viruses of the Western honey bee (Apis mellifera), deformed wing virus (DWV) and Israel acute paralysis virus (IAPV). All viral RNA was extracted from North American samples of honey bees or, in one case, the ectoparasitic mite Varroa destructor. Results Coverage depth was generally lower for IAPV than DWV, and marked gaps in coverage occurred in several narrow regions (< 50 bp) of IAPV. These coverage gaps occurred across sequencing runs and were virtually unchanged when reads were re-mapped with greater permissiveness (up to 8% divergence), suggesting a recurrent sequencing artifact rather than strain divergence. Consensus sequences of DWV for each sample showed little phylogenetic divergence, low nucleotide diversity, and strongly negative values of Fu and Li’s D statistic, suggesting a recent population bottleneck and/or purifying selection. The Kakugo strain of DWV fell outside of all other DWV sequences at 100% bootstrap support. IAPV consensus sequences supported the existence of multiple clades as had been previously reported, and Fu and Li’s D was closer to neutral expectation overall, although a sliding-window analysis identified a significantly positive D within the protease region, suggesting selection maintains diversity in that region. Within-sample mean diversity was comparable between the two viruses on average, although for both viruses there was substantial variation among samples in mean diversity at third codon positions and in the number of high-diversity sites. FST values were bimodal for DWV, likely reflecting neutral divergence in two low-diversity populations, whereas IAPV had several sites that were strong outliers with very low FST. Conclusions This initial survey of genetic variation within honey bee RNA viruses suggests future directions for studies examining the underlying causes of population-genetic structure in these economically important pathogens. PMID:23497218

Population-genomic variation within RNA viruses of the Western honey bee, Apis mellifera, inferred from deep sequencing.

PubMed

Cornman, Robert Scott; Boncristiani, Humberto; Dainat, Benjamin; Chen, Yanping; vanEngelsdorp, Dennis; Weaver, Daniel; Evans, Jay D

2013-03-07

Deep sequencing of viruses isolated from infected hosts is an efficient way to measure population-genetic variation and can reveal patterns of dispersal and natural selection. In this study, we mined existing Illumina sequence reads to investigate single-nucleotide polymorphisms (SNPs) within two RNA viruses of the Western honey bee (Apis mellifera), deformed wing virus (DWV) and Israel acute paralysis virus (IAPV). All viral RNA was extracted from North American samples of honey bees or, in one case, the ectoparasitic mite Varroa destructor. Coverage depth was generally lower for IAPV than DWV, and marked gaps in coverage occurred in several narrow regions (< 50 bp) of IAPV. These coverage gaps occurred across sequencing runs and were virtually unchanged when reads were re-mapped with greater permissiveness (up to 8% divergence), suggesting a recurrent sequencing artifact rather than strain divergence. Consensus sequences of DWV for each sample showed little phylogenetic divergence, low nucleotide diversity, and strongly negative values of Fu and Li's D statistic, suggesting a recent population bottleneck and/or purifying selection. The Kakugo strain of DWV fell outside of all other DWV sequences at 100% bootstrap support. IAPV consensus sequences supported the existence of multiple clades as had been previously reported, and Fu and Li's D was closer to neutral expectation overall, although a sliding-window analysis identified a significantly positive D within the protease region, suggesting selection maintains diversity in that region. Within-sample mean diversity was comparable between the two viruses on average, although for both viruses there was substantial variation among samples in mean diversity at third codon positions and in the number of high-diversity sites. FST values were bimodal for DWV, likely reflecting neutral divergence in two low-diversity populations, whereas IAPV had several sites that were strong outliers with very low FST. This initial survey of genetic variation within honey bee RNA viruses suggests future directions for studies examining the underlying causes of population-genetic structure in these economically important pathogens.

Patterns of plant diversity loss and species turnover resulting from land abandonment and intensification in semi-natural grasslands.

PubMed

Uchida, Kei; Koyanagi, Tomoyo F; Matsumura, Toshikazu; Koyama, Asuka

2018-07-15

Land-use changes cause biodiversity loss in semi-natural ecosystems worldwide. Biotic homogenization has led to biodiversity loss, mainly through declines in species composition turnover. Elucidating patterns of turnover in species composition could enhance our understanding of how anthropogenic activities affect community assembly. Here, we focused on whether the decreasing patterns in plant diversity and turnover of species composition resulting from land-use change vary in two regions. We estimated the species diversity and composition of semi-natural grasslands surrounding paddy fields in satoyama landscapes. We examined the differences in species diversity and composition across three land-use types (abandoned, traditional, and intensified) in two regions (Hyogo and Niigata Prefectures, Japan), which were characterized by different climatic conditions. We then assessed alpha-, beta-, and gamma-diversity to compare the patterns of diversity losses in the two regions as a result of land-use changes. In each region, gamma-diversity was consistently higher in the traditional sites compared to abandoned or intensified sites. The analyses revealed that most of the beta-diversity in traditional sites differed significantly from those of abandoned and intensified sites in both regions. However, the beta-diversity of total and perennial species did not differ between traditional and abandoned sites in the Hyogo region. We noted that the beta-diversity of total and perennial species in intensified sites was much lower than that in the traditional sites of the Niigata region. Overall, the patterns of alpha- and gamma-diversity loss were similar in both study regions. Although the biotic homogenization was caused by intensified land-use in the Niigata region, this hypothesis did not completely explain the loss of biodiversity in the abandoned sites in the Hyogo region. The present study contributes to the growing body of work investigating changes in biodiversity as a result of both biotic homogenization and differentiation in semi-natural ecosystems. Conservationists and policy makers should focus on patterns of species composition responded to land-use changes that continue to increase worldwide. Copyright © 2018 Elsevier Ltd. All rights reserved.

Understanding deformation with high angular resolution electron backscatter diffraction (HR-EBSD)

NASA Astrophysics Data System (ADS)

Britton, T. B.; Hickey, J. L. R.

2018-01-01

High angular resolution electron backscatter diffraction (HR-EBSD) affords an increase in angular resolution, as compared to ‘conventional’ Hough transform based EBSD, of two orders of magnitude, enabling measurements of relative misorientations of 1 x 10-4 rads (~ 0.006°) and changes in (deviatoric) lattice strain with a precision of 1 x 10-4. This is achieved through direct comparison of two or more diffraction patterns using sophisticated cross-correlation based image analysis routines. Image shifts between zone axes in the two-correlated diffraction pattern are measured with sub-pixel precision and this realises the ability to measure changes in interplanar angles and lattice orientation with a high degree of sensitivity. These shifts are linked to strains and lattice rotations through simple geometry. In this manuscript, we outline the basis of the technique and two case studies that highlight its potential to tackle real materials science challenges, such as deformation patterning in polycrystalline alloys.

Kaleidoscopic imaging patterns of complex structures fabricated by laser-induced deformation

PubMed Central

Zhang, Haoran; Yang, Fengyou; Dong, Jianjie; Du, Lena; Wang, Chuang; Zhang, Jianming; Guo, Chuan Fei; Liu, Qian

2016-01-01

Complex surface structures have stimulated a great deal of interests due to many potential applications in surface devices. However, in the fabrication of complex surface micro-/nanostructures, there are always great challenges in precise design, or good controllability, or low cost, or high throughput. Here, we present a route for the accurate design and highly controllable fabrication of surface quasi-three-dimensional (quasi-3D) structures based on a thermal deformation of simple two-dimensional laser-induced patterns. A complex quasi-3D structure, coaxially nested convex–concave microlens array, as an example, demonstrates our capability of design and fabrication of surface elements with this method. Moreover, by using only one relief mask with the convex–concave microlens structure, we have gotten hundreds of target patterns at different imaging planes, offering a cost-effective solution for mass production in lithography and imprinting, and portending a paradigm in quasi-3D manufacturing. PMID:27910852

Functional, size and taxonomic diversity of fish along a depth gradient in the deep sea.

PubMed

Mindel, Beth L; Neat, Francis C; Trueman, Clive N; Webb, Thomas J; Blanchard, Julia L

2016-01-01

Biodiversity is well studied in ecology and the concept has been developed to include traits of species, rather than solely taxonomy, to better reflect the functional diversity of a system. The deep sea provides a natural environmental gradient within which to study changes in different diversity metrics, but traits of deep-sea fish are not widely known, hampering the application of functional diversity to this globally important system. We used morphological traits to determine the functional richness and functional divergence of demersal fish assemblages along the continental slope in the Northeast Atlantic, at depths of 300-2,000 m. We compared these metrics to size diversity based on individual body size and species richness. Functional richness and size diversity showed similar patterns, with the highest diversity at intermediate depths; functional divergence showed the opposite pattern, with the highest values at the shallowest and deepest parts of the study site. Species richness increased with depth. The functional implications of these patterns were deduced by examining depth-related changes in morphological traits and the dominance of feeding guilds as illustrated by stable isotope analyses. The patterns in diversity and the variation in certain morphological traits can potentially be explained by changes in the relative dominance of pelagic and benthic feeding guilds. All measures of diversity examined here suggest that the deep areas of the continental slope may be equally or more diverse than assemblages just beyond the continental shelf.

Patterns and predictors of β-diversity in the fragmented Brazilian Atlantic forest: a multiscale analysis of forest specialist and generalist birds.

PubMed

Morante-Filho, José Carlos; Arroyo-Rodríguez, Víctor; Faria, Deborah

2016-01-01

Biodiversity maintenance in human-altered landscapes (HALs) depends on the species turnover among localities, but the patterns and determinants of β-diversity in HALs are poorly known. In fact, declines, increases and neutral shifts in β-diversity have all been documented, depending on the landscape, ecological group and spatial scale of analysis. We shed some light on this controversy by assessing the patterns and predictors of bird β-diversity across multiple spatial scales considering forest specialist and habitat generalist bird assemblages. We surveyed birds from 144 point counts in 36 different forest sites across two landscapes with different amount of forest cover in the Brazilian Atlantic forest. We analysed β-diversity among points, among sites and between landscapes with multiplicative diversity partitioning of Hill numbers. We tested whether β-diversity among points was related to within-site variations in vegetation structure, and whether β-diversity among sites was related to site location and/or to differences among sites in vegetation structure and landscape composition (i.e. per cent forest and pasture cover surrounding each site). β-diversity between landscapes was lower than among sites and among points in both bird assemblages. In forest specialist birds, the landscape with less forest cover showed the highest β-diversity among sites (bird differentiation among sites), but generalist birds showed the opposite pattern. At the local scale, however, the less forested landscape showed the lowest β-diversity among points (bird homogenization within sites), independently of the bird assemblage. β-diversity among points was weakly related to vegetation structure, but higher β-diversity values were recorded among sites that were more isolated from each other, and among sites with higher differences in landscape composition, particularly in the less forested landscape. Our findings indicate that patterns of bird β-diversity vary across scales and are strongly related to landscape composition. Bird assemblages are shaped by both environmental filtering and dispersal limitation, particularly in less forested landscapes. Conservation and management strategies should therefore prevent deforestation in this biodiversity hotspot. © 2015 The Authors. Journal of Animal Ecology © 2015 British Ecological Society.

A proto-type design of a real-tissue phantom for the validation of deformation algorithms and 4D dose calculations

NASA Astrophysics Data System (ADS)

Szegedi, M.; Rassiah-Szegedi, P.; Fullerton, G.; Wang, B.; Salter, B.

2010-07-01

The purpose of this study is to design a real-tissue phantom for use in the validation of deformation algorithms. A phantom motion controller that runs sinusoidal and non-regular patient-based breathing pattern, via a piston, was applied to porcine liver tissue. It was regulated to simulate movement ranges similar to recorded implanted liver markers from patients. 4D CT was applied to analyze deformation. The suitability of various markers in the liver and the position reproducibility of markers and of reference points were studied. The similarity of marker motion pattern in the liver phantom and in real patients was evaluated. The viability of the phantom over time and its use with electro-magnetic tracking devices were also assessed. High contrast markers, such as carbon markers, implanted in the porcine liver produced less image artifacts on CT and were well visualized compared to metallic ones. The repositionability of markers was within a measurement accuracy of ±2 mm. Similar anatomical patient motions were reproducible up to elongations of 3 cm for a time period of at least 90 min. The phantom is compatible with electro-magnetic tracking devices and 4D CT. The phantom motion is reproducible and simulates realistic patient motion and deformation. The ability to carry out voxel-based tracking allows for the evaluation of deformation algorithms in a controlled environment with recorded patient traces. The phantom is compatible with all therapy devices clinically encountered in our department.

Climatic niche conservatism and ecological opportunity in the explosive radiation of arvicoline rodents (Arvicolinae, Cricetidae).

PubMed

Lv, Xue; Xia, Lin; Ge, Deyan; Wu, Yongjie; Yang, Qisen

2016-05-01

Climatic niche conservatism shapes patterns of diversity in many taxonomic groups, while ecological opportunity (EO) can trigger rapid speciation that is less constrained by the amount of time a lineage has occupied a given habitat. These two processes are well studied, but limited research has considered their joint and relative roles in shaping diversity patterns. We characterized climatic and biogeographic variables for 102 species of arvicoline rodents (Arvicolinae, Cricetidae), testing the effects of climatic niche conservatism and EO on arvicoline diversification as lineages transitioned between biogeographic regions. We found that the amount of time a lineage has occupied a precipitation niche is positively correlated with diversity along a precipitation gradient, suggesting climatic niche conservatism. In contrast, shift in diversification rate explained diversity patterns along a temperature gradient. Our results suggest that an indirect relationship exists between temperature and diversification that is associated with EO as arvicoline rodents colonized warm Palearctic environments. Climatic niche conservatism alone did not fully explain diversity patterns under density-dependence, highlighting the additional importance of EO-related processes in promoting the explosive radiation in arvicoline rodents and shaping diversity pattern among biogeographic regions and along climatic gradients. © 2016 The Author(s). Evolution © 2016 The Society for the Study of Evolution.

Understanding cyclic seismicity and ground deformation patterns at volcanoes: Intriguing lessons from Tungurahua volcano, Ecuador

NASA Astrophysics Data System (ADS)

Neuberg, Jürgen W.; Collinson, Amy S. D.; Mothes, Patricia A.; Ruiz, Mario C.; Aguaiza, Santiago

2018-01-01

Cyclic seismicity and ground deformation patterns are observed on many volcanoes worldwide where seismic swarms and the tilt of the volcanic flanks provide sensitive tools to assess the state of volcanic activity. Ground deformation at active volcanoes is often interpreted as pressure changes in a magmatic reservoir, and tilt is simply translated accordingly into inflation and deflation of such a reservoir. Tilt data recorded by an instrument in the summit area of Tungurahua volcano in Ecuador, however, show an intriguing and unexpected behaviour on several occasions: prior to a Vulcanian explosion when a pressurisation of the system would be expected, the tilt signal declines significantly, hence indicating depressurisation. At the same time, seismicity increases drastically. Envisaging that such a pattern could carry the potential to forecast Vulcanian explosions on Tungurahua, we use numerical modelling and reproduce the observed tilt patterns in both space and time. We demonstrate that the tilt signal can be more easily explained as caused by shear stress due to viscous flow resistance, rather than by pressurisation of the magmatic plumbing system. In general, our numerical models prove that if magma shear viscosity and ascent rate are high enough, the resulting shear stress is sufficient to generate a tilt signal as observed on Tungurahua. Furthermore, we address the interdependence of tilt and seismicity through shear stress partitioning and suggest that a joint interpretation of tilt and seismicity can shed new light on the eruption potential of silicic volcanoes.

A method to estimate the effect of deformable image registration uncertainties on daily dose mapping

PubMed Central

Murphy, Martin J.; Salguero, Francisco J.; Siebers, Jeffrey V.; Staub, David; Vaman, Constantin

2012-01-01

Purpose: To develop a statistical sampling procedure for spatially-correlated uncertainties in deformable image registration and then use it to demonstrate their effect on daily dose mapping. Methods: Sequential daily CT studies are acquired to map anatomical variations prior to fractionated external beam radiotherapy. The CTs are deformably registered to the planning CT to obtain displacement vector fields (DVFs). The DVFs are used to accumulate the dose delivered each day onto the planning CT. Each DVF has spatially-correlated uncertainties associated with it. Principal components analysis (PCA) is applied to measured DVF error maps to produce decorrelated principal component modes of the errors. The modes are sampled independently and reconstructed to produce synthetic registration error maps. The synthetic error maps are convolved with dose mapped via deformable registration to model the resulting uncertainty in the dose mapping. The results are compared to the dose mapping uncertainty that would result from uncorrelated DVF errors that vary randomly from voxel to voxel. Results: The error sampling method is shown to produce synthetic DVF error maps that are statistically indistinguishable from the observed error maps. Spatially-correlated DVF uncertainties modeled by our procedure produce patterns of dose mapping error that are different from that due to randomly distributed uncertainties. Conclusions: Deformable image registration uncertainties have complex spatial distributions. The authors have developed and tested a method to decorrelate the spatial uncertainties and make statistical samples of highly correlated error maps. The sample error maps can be used to investigate the effect of DVF uncertainties on daily dose mapping via deformable image registration. An initial demonstration of this methodology shows that dose mapping uncertainties can be sensitive to spatial patterns in the DVF uncertainties. PMID:22320766

Investigating internal architecture effect in plastic deformation and failure for TPMS-based scaffolds using simulation methods and experimental procedure.

PubMed

Kadkhodapour, J; Montazerian, H; Raeisi, S

2014-10-01

Rapid prototyping (RP) has been a promising technique for producing tissue engineering scaffolds which mimic the behavior of host tissue as properly as possible. Biodegradability, agreeable feasibility of cell growth, and migration parallel to mechanical properties, such as strength and energy absorption, have to be considered in design procedure. In order to study the effect of internal architecture on the plastic deformation and failure pattern, the architecture of triply periodic minimal surfaces which have been observed in nature were used. P and D surfaces at 30% and 60% of volume fractions were modeled with 3∗3∗ 3 unit cells and imported to Objet EDEN 260 3-D printer. Models were printed by VeroBlue FullCure 840 photopolymer resin. Mechanical compression test was performed to investigate the compressive behavior of scaffolds. Deformation procedure and stress-strain curves were simulated by FEA and exhibited good agreement with the experimental observation. Current approaches for predicting dominant deformation mode under compression containing Maxwell's criteria and scaling laws were also investigated to achieve an understanding of the relationships between deformation pattern and mechanical properties of porous structures. It was observed that effect of stress concentration in TPMS-based scaffolds resultant by heterogeneous mass distribution, particularly at lower volume fractions, led to a different behavior from that of typical cellular materials. As a result, although more parameters are considered for determining dominant deformation in scaling laws, two mentioned approaches could not exclusively be used to compare the mechanical response of cellular materials at the same volume fraction. Copyright © 2014 Elsevier B.V. All rights reserved.

On the feedback between forearc morphotectonics and megathrust earthquakes in subduction zones

NASA Astrophysics Data System (ADS)

Rosenau, M.; Oncken, O.

2008-12-01

An increasing number of observations suggest an intrinsic relationship between short- and long-term deformation processes in subduction zones. These include the global correlation between megathrust earthquake slip patterns with morphotectonic forearc features, the historical predominance of giant earthquakes (M > 9) along accretionary margins and the occurrence of (slow and shallow) tsunami earthquakes along erosive margins. To gain insight into the interplay between seismogenesis and tectonics in subduction settings we have developed a new modeling technique which joins analog and elastic dislocation approaches. Using elastoplastic wedges overlying a rate- and state-dependent interface, we demonstrate how analog earthquakes drive permanent wedge deformation consistent with the dynamic Coulomb wedge theory and how wedge deformation in turn controls basal "seismicity". During an experimental run, elastoplastic wedges evolve from those comparable to accretionary margins, characterized by plastic wedge shortening, to those mimicking erosive margins, characterized by minor plastic deformation. Permanent shortening localizes at the periphery of the "seismogenic" zone leading to a "morphotectonic" segmentation of the upper plate. Along with the evolving segmentation of the wedge, the magnitude- frequency relationship and recurrence distribution of analog earthquakes develop towards more periodic events of similar size (i.e. characteristic earthquakes). From the experiments we infer a positive feedback between short- and long-term deformation processes which tends to stabilize the spatiotemporal patterns of elastoplastic deformation in subduction settings. We suggest (1) that forearc anatomy reflects the distribution of seismic and aseismic slip at depth, (2) that morphotectonic segmentation assists the occurrence of more characteristic earthquakes, (3) that postseismic near-trench shortening relaxes coseismic compression by megathrust earthquakes and thus reduces tsunami earthquake risk in accretionary settings and (4) that permanent coastal shortening allows adjacent segments to fail more synchronized thus triggering much greater earthquakes in accretionary settings.

Deformation patterns, magma supply, and magma storage at Karymsky Volcanic Center, Kamchatka, Russia, 2000-2010, revealed by InSAR

NASA Astrophysics Data System (ADS)

Ji, Lingyun; Izbekov, Pavel; Senyukov, Sergey; Lu, Zhong

2018-02-01

Under a complex geological region influenced by the subduction of the Pacific plate, Kamchatka Peninsula is one of the most active volcanic arcs in the Pacific Rim. Due to logistical difficulty in instrumentation, shallow magma plumbing systems beneath some of the Kamchatkan volcanoes are poorly understood. InSAR offers a safe and quick method for monitoring volcanic deformation with a high spatial resolution. In this study, a group of satellite radar interferograms that span the time interval from 2000 to 2010 shows eruptive and non-eruptive deformation at Karymsky Volcanic Center (KVC), Kamchatka, Russia. All the interferograms provide details of the activity around the KVC during 2000-2010, as follows: (1) from 2000 to 2004, the Karymsky-AN (Akademia Nauk) area deflated and the MS (Maly Semyachik) area inflated, (2) from 2004 to 2006, the Karymsky-AN area deflated with ongoing eruption, while the MS area subsided without eruption, (3) from 2006 to 2008, as with 2000-2004, the Karymsky-AN area deflated and the MS area inflated, (4) from 2008 to 2010, the Karymsky-AN area inflated up to 3 cm, and the MS area subsided. Point source models suggest that two magma reservoirs provide a good fit to the observed deformation. One source is located beneath the area between Karymsky and AN at a depth of approximately 7.0 km, and the other one is situated beneath MS at a depth of around 5.8 km. Synchronous deformation patterns suggest that two magma systems are fed from the same deep magma source and connected by a fracture zone. The InSAR results are consistent with GPS ground deformation measurements, seismic data, and petrological constraints.

Multiresponsive Kinematics and Robotics of Surface-Patterned Polymer Film.

PubMed

Liang, Shumin; Qiu, Xiaxin; Yuan, Jun; Huang, Wei; Du, Xuemin; Zhang, Lidong

2018-06-06

Soft robots, sensors, and energy harvesters require materials that are capable of converting external stimuli to visible deformations, especially when shape-programmable deformations are desired. Herein, we develop a polymer film that can reversibly respond to humidity, heating, and acetone vapors with the generation of shape-programmable large deformations. Poly(vinylidene fluoride) film, capable of providing acetone responsiveness, is designed with microchannel patterns created on its one side by using templates, and the microchannels-patterned side is then treated with hygroscopic 3-aminopropyltriethoxysilane (APTES) to give humidity/heating-responsive elements. The APTES-modified microchannels lead to anisotropic flexural modulus and hygroscopicity in the film, resulting in the shape-programmed kinematics depending on the orientations of surface microchannels. As the microchannels align at oblique/right angles with respect to the long axis of the film strips, the coiling/curling motions can be generated in response to the stimuli, and the better motion performances are found in humidity- and heating-driven systems. This material utilized in self-adaptive soft robots exhibits prominent toughness, powerful strength, and long endurance for converting humidity and heat to mechanical works including transportation of lightweight objects, automatic sensing cap, and mimicking crawling in nature. We thus believe that this material with shape-programmable multisensing capability might be suitable for soft machines and robotics.

Patterns and Variation in Benthic Biodiversity in a Large Marine Ecosystem

PubMed Central

Lee, Jonathan D.

2015-01-01

While there is a persistent inverse relationship between latitude and species diversity across many taxa and ecosystems, deviations from this norm offer an opportunity to understand the conditions that contribute to large-scale diversity patterns. Marine systems, in particular, provide such an opportunity, as marine diversity does not always follow a strict latitudinal gradient, perhaps because several hypothesized drivers of the latitudinal diversity gradient are uncorrelated in marine systems. We used a large scale public monitoring dataset collected over an eight year period to examine benthic marine faunal biodiversity patterns for the continental shelf (55–183 m depth) and slope habitats (184–1280 m depth) off the US West Coast (47°20′N—32°40′N). We specifically asked whether marine biodiversity followed a strict latitudinal gradient, and if these latitudinal patterns varied across depth, in different benthic substrates, and over ecological time scales. Further, we subdivided our study area into three smaller regions to test whether coast-wide patterns of biodiversity held at regional scales, where local oceanographic processes tend to influence community structure and function. Overall, we found complex patterns of biodiversity on both the coast-wide and regional scales that differed by taxonomic group. Importantly, marine biodiversity was not always highest at low latitudes. We found that latitude, depth, substrate, and year were all important descriptors of fish and invertebrate diversity. Invertebrate richness and taxonomic diversity were highest at high latitudes and in deeper waters. Fish richness also increased with latitude, but exhibited a hump-shaped relationship with depth, increasing with depth up to the continental shelf break, ~200 m depth, and then decreasing in deeper waters. We found relationships between fish taxonomic and functional diversity and latitude, depth, substrate, and time at the regional scale, but not at the coast-wide scale, suggesting that coast-wide patterns can obscure important correlates at smaller scales. Our study provides insight into complex diversity patterns of the deep water soft substrate benthic ecosystems off the US West Coast. PMID:26308521

Low Functional β-Diversity Despite High Taxonomic β-Diversity among Tropical Estuarine Fish Communities

PubMed Central

Villéger, Sébastien; Miranda, Julia Ramos; Hernandez, Domingo Flores; Mouillot, David

2012-01-01

The concept of β-diversity, defined as dissimilarity among communities, has been widely used to investigate biodiversity patterns and community assembly rules. However, in ecosystems with high taxonomic β-diversity, due to marked environmental gradients, the level of functional β-diversity among communities is largely overlooked while it may reveal processes shaping community structure. Here, decomposing biodiversity indices into α (local) and γ (regional) components, we estimated taxonomic and functional β-diversity among tropical estuarine fish communities, through space and time. We found extremely low functional β-diversity values among fish communities (<1.5%) despite high dissimilarity in species composition and species dominance. Additionally, in contrast to the high α and γ taxonomic diversities, α and γ functional diversities were very close to the minimal value. These patterns were caused by two dominant functional groups which maintained a similar functional structure over space and time, despite the strong dissimilarity in taxonomic structure along environmental gradients. Our findings suggest that taxonomic and functional β-diversity deserve to be quantified simultaneously since these two facets can show contrasting patterns and the differences can in turn shed light on community assembly rules. PMID:22792395

Investigation of Mild Steel Thin-Wall Tubes in Unfilled and Foam-Filled Triangle, Square, and Hexagonal Cross Sections Under Compression Load

NASA Astrophysics Data System (ADS)

Rajak, Dipen Kumar; Kumaraswamidhas, L. A.; Das, S.

2018-02-01

This study has examined proposed structures with mild steel-reinforced LM30 aluminum (Al) alloy having diversely unfilled and 10 wt.% SiCp composite foam-filled tubes for improving axial compression performance. This class of material has novel physical, mechanical, and electrical properties along with low density. In the present experiment, Al alloy foams were prepared by the melt route technique using metal hydride powder as a foaming agent. Crash energy phenomena for diverse unfilled and foam-filled in mild steel thin-wall tubes (triangular, square and hexagonal) were studied as well. Compression deformation investigation was conducted at strain rates of 0.001-0.1/s for evaluating specific energy absorption (SEA) under axial loading conditions. The results were examined to measure plateau stress, maximum densification strain, and deformation mechanism of the materials. Specific energy absorption and total energy absorption capacities of the unfilled and filled sections were determined from the compressive stress-strain curves, which were then compared with each other.

Environmental Predictors of Diversity in Recent Planktonic Foraminifera as Recorded in Marine Sediments

PubMed Central

Pearson, Paul N.; Dunkley Jones, Tom; Purvis, Andy

2016-01-01

Global diversity patterns are thought to result from a combination of environmental and historical factors. This study tests the set of ecological and evolutionary hypotheses proposed to explain the global variation in present-day coretop diversity in the macroperforate planktonic foraminifera, a clade with an exceptional fossil record. Within this group, marine surface sediment assemblages are thought to represent an accurate, although centennial to millennial time-averaged, representation of recent diversity patterns. Environmental variables chosen to capture ocean temperature, structure, productivity and seasonality were used to model a range of diversity measures across the world’s oceans. Spatial autoregressive models showed that the same broad suite of environmental variables were important in shaping each of the four largely independent diversity measures (rarefied species richness, Simpson’s evenness, functional richness and mean evolutionary age). Sea-surface temperature explains the largest portion of diversity in all four diversity measures, but not in the way predicted by the metabolic theory of ecology. Vertical structure could be linked to increased diversity through the strength of stratification, but not through the depth of the mixed layer. There is limited evidence that seasonal turnover explains diversity patterns. There is evidence for functional redundancy in the low-latitude sites. The evolutionary mechanism of deep-time stability finds mixed support whilst there is relatively little evidence for an out-of-the-tropics model. These results suggest the diversity patterns of planktonic foraminifera cannot be explained by any one environmental variable or proposed mechanism, but instead reflect multiple processes acting in concert. PMID:27851751

Environmental Predictors of Diversity in Recent Planktonic Foraminifera as Recorded in Marine Sediments.

PubMed

Fenton, Isabel S; Pearson, Paul N; Dunkley Jones, Tom; Purvis, Andy

2016-01-01

Global diversity patterns are thought to result from a combination of environmental and historical factors. This study tests the set of ecological and evolutionary hypotheses proposed to explain the global variation in present-day coretop diversity in the macroperforate planktonic foraminifera, a clade with an exceptional fossil record. Within this group, marine surface sediment assemblages are thought to represent an accurate, although centennial to millennial time-averaged, representation of recent diversity patterns. Environmental variables chosen to capture ocean temperature, structure, productivity and seasonality were used to model a range of diversity measures across the world's oceans. Spatial autoregressive models showed that the same broad suite of environmental variables were important in shaping each of the four largely independent diversity measures (rarefied species richness, Simpson's evenness, functional richness and mean evolutionary age). Sea-surface temperature explains the largest portion of diversity in all four diversity measures, but not in the way predicted by the metabolic theory of ecology. Vertical structure could be linked to increased diversity through the strength of stratification, but not through the depth of the mixed layer. There is limited evidence that seasonal turnover explains diversity patterns. There is evidence for functional redundancy in the low-latitude sites. The evolutionary mechanism of deep-time stability finds mixed support whilst there is relatively little evidence for an out-of-the-tropics model. These results suggest the diversity patterns of planktonic foraminifera cannot be explained by any one environmental variable or proposed mechanism, but instead reflect multiple processes acting in concert.

Comparative riverscape genetics reveals reservoirs of genetic diversity for conservation and restoration of Great Plains fishes.

PubMed

Osborne, Megan J; Perkin, Joshuah S; Gido, Keith B; Turner, Thomas F

2014-12-01

We used comparative landscape genetics to examine the relative roles of historical events, intrinsic traits and landscape factors in determining the distribution of genetic diversity of river fishes across the North American Great Plains. Spatial patterns of diversity were overlaid on a patch-based graphical model and then compared within and among three species that co-occurred across five Great Plains watersheds. Species differing in reproductive strategy (benthic vs. pelagic-spawning) were hypothesized to have different patterns of genetic diversity, but the overriding factor shaping contemporary patterns of diversity was the signature of past climates and geological history. Allelic diversity was significantly higher at southern latitudes for Cyprinella lutrensis and Hybognathus placitus, consistent with northward expansion from southern Pleistocene refugia. Within the historical context, all species exhibited lowered occupancy and abundance in heavily fragmented and drier upstream reaches, particularly H. placitus; a pelagic-spawning species, suggesting rates of extirpation have outpaced losses of genetic diversity in this species. Within most tributary basins, genetically diverse populations of each species persisted. Hence, reconnecting genetically diverse populations with those characterized by reduced diversity (regardless of their position within the riverine network) would provide populations with greater genetic and demographic resilience. We discuss cases where cross-basin transfer may be appropriate to enhance genetic diversity and mitigate negative effects of climate change. Overall, striking similarities in genetic patterns and in response to fragmentation and dewatering suggest a common strategy for genetic resource management in this unique riverine fish assemblage. © 2014 John Wiley & Sons Ltd.

The Brazilian freshwater wetscape: Changes in tree community diversity and composition on climatic and geographic gradients

PubMed Central

Wittmann, Florian; Marques, Márcia C. M.; Damasceno Júnior, Geraldo; Budke, Jean Carlos; Piedade, Maria T. F.; de Oliveira Wittmann, Astrid; Montero, Juan Carlos; de Assis, Rafael L.; Targhetta, Natália; Parolin, Pia; Junk, Wolfgang J.

2017-01-01

Wetlands harbor an important compliment of regional plant diversity, but in many regions data on wetland diversity and composition is still lacking, thus hindering our understanding of the processes that control it. While patterns of broad-scale terrestrial diversity and composition typically correlate with contemporary climate it is not clear to what extent patterns in wetlands are complimentary, or conflicting. To elucidate this, we consolidate data from wetland forest inventories in Brazil and examine patterns of diversity and composition along temperature and rainfall gradients spanning five biomes. We collated 196 floristic inventories covering an area >220 ha and including >260,000 woody individuals. We detected a total of 2,453 tree species, with the Amazon alone accounting for nearly half. Compositional patterns indicated differences in freshwater wetland floras among Brazilian biomes, although biomes with drier, more seasonal climates tended to have a larger proportion of more widely distributed species. Maximal alpha diversity increased with annual temperature, rainfall, and decreasing seasonality, patterns broadly consistent with upland vegetation communities. However, alpha diversity-climate relationships were only revealed at higher diversity values associated with the uppermost quantiles, and in most sites diversity varied irrespective of climate. Likewise, mean biome-level differences in alpha-diversity were unexpectedly modest, even in comparisons of savanna-area wetlands to those of nearby forested regions. We describe attenuated wetland climate-diversity relationships as a shifting balance of local and regional effects on species recruitment. Locally, excessive waterlogging strongly filters species able to colonize from regional pools. On the other hand, increased water availability can accommodate a rich community of drought-sensitive immigrant species that are able to track buffered wetland microclimates. We argue that environmental conditions in many wetlands are not homogeneous with respect to regional climate, and that responses of wetland tree communities to future climate change may lag behind that of non-wetland, terrestrial habitat. PMID:28394937

Observation of the wing deformation and the CFD study of cicada

NASA Astrophysics Data System (ADS)

Dai, Hu; Mohd Adam Das, Shahrizan; Luo, Haoxiang

2011-11-01

We studied the wing properties and kinematics of cicada when the 13-year species emerged in amazingly large numbers in middle Tennessee during May 2011. Using a high-speed camera, we recorded the wing motion of the insect and then reconstructed the three-dimensional wing kinematics using a video digitization software. Like many other insects, the deformation of the cicada wing is asymmetric between the downstroke and upstroke half cycles, and this particular deformation pattern would benefit production of the lift and propulsive forces. Both two-dimensional and three-dimensional CFD studies are carried out based on the reconstructed wing motion. The implication of the study on the role of the aerodynamic force in the wing deformation will be discussed. This work is sponsored by the NSF.

Mean wind patterns and snow depths in an alpine-subalpine ecosystem as measured by damage to coniferous trees

Treesearch

G. L. Wooldridge; R. C. Musselman; R. A. Sommerfeld; D. G. Fox; B. H. Connell

1996-01-01

1. Deformations of Engelmann spruce and subalpine fir trees were surveyed for the purpose of determining climatic wind speeds and directions and snow depths in the Glacier Lakes Ecosystem Experiments Site (GLEES) in the Snowy Range of southeastern Wyoming, USA. Tree deformations were recorded at 50- and 100-m grid intervals over areas of c. 30 ha and 300 ha,...

Development of olivine crystallographic preferred orientation in response to strain-induced fabric geometry

NASA Astrophysics Data System (ADS)

Chatzaras, Vasileios; Kruckenberg, Seth C.; Cohen, Shaina M.; Medaris, L. Gordon, Jr.; Withers, Anthony C.; Bagley, Brian

2016-04-01

The effect of finite strain ellipsoid geometry on crystallographic preferred orientation (CPO) is well known for crustal minerals (e.g., quartz, calcite, biotite, and hornblende). In the upper mantle, however, it remains poorly constrained how strain and fabric may affect olivine CPO. We present data from a suite of 40 spinel peridotite xenoliths from Marie Byrd Land (west Antarctica), which support an interpretation that fabric geometry rather than deformation conditions control the development of olivine CPO. We use X-ray computed tomography (XRCT) to quantitatively determine spinel fabric (orientation and geometry). Olivine CPOs, determined by Electron Backscattered Diffraction (EBSD), are plotted with respect to the XRCT-derived spinel foliation and lineation; this approach allows for the accurate, and unbiased, identification of CPO symmetries and types in mantle xenoliths. The combined XRCT and EBSD data show that the xenoliths are characterized by a range of fabric geometries (from oblate to prolate) and olivine CPO patterns; we recognize the A-type, axial-[010], axial-[100], and B-type patterns. The mantle xenoliths equilibrated at temperatures 779-1198 oC, as determined by 2-Px geothermometry. Using a geotherm consistent with the stability of spinel in all xenoliths, the range of equilibration temperatures occurs at depths between 39 and 72 km. Olivine recrystallized grain size piezometry reveals differential stresses ranging 2-60 MPa. Analysis of low-angle misorientation axes show a wide range in the distribution of rotation axes, with dominant {0kl}[100] slip. We use Fourier Transform Infrared (FTIR) spectroscopy to estimate the water content in the xenolith with the B-type CPO pattern. FTIR analysis shows that the equilibrium H concentration in olivine is low (4-13 ppm H2O). Combining these data, we observe that olivine CPO symmetry is controlled neither by the deformation conditions (stress, temperature, pressure, water content) for the range of conditions estimated in the Marie Byrd Land xenoliths, nor by the activation of the slip systems predicted by deformation experiments. Rather, our data show that olivine CPO is controlled by transitions in strain-induced fabric geometry. Microstructures and deformation mechanism maps suggest that deformation is dominated by dislocation-accommodated grain boundary sliding. We propose that slip of olivine glide planes and rotation of olivine grains occur so as to accommodate the imposed material flow, which is guided by the 3D strain-induced fabric geometry. As a result of this process, the axial-[010] and B-type patterns form in relation to oblate fabric ellipsoids, the A-type pattern forms in a range of fabric ellipsoids, and the axial-[100] pattern is associated with prolate fabric ellipsoids. We therefore suggest that the well-known process of strain geometry-induced development of CPO is also applicable to upper mantle rocks.

The effects of topography on magma chamber deformation models: Application to Mt. Etna and radar interferometry

NASA Astrophysics Data System (ADS)

Williams, Charles A.; Wadge, Geoff

We have used a three-dimensional elastic finite element model to examine the effects of topography on the surface deformation predicted by models of magma chamber deflation. We used the topography of Mt. Etna to control the geometry of our model, and compared the finite element results to those predicted by an analytical solution for a pressurized sphere in an elastic half-space. Topography has a significant effect on the predicted surface deformation for both displacement profiles and synthetic interferograms. Not only are the predicted displacement magnitudes significantly different, but also the map-view patterns of displacement. It is possible to match the predicted displacement magnitudes fairly well by adjusting the elevation of a reference surface; however, the horizontal pattern of deformation is still significantly different. Thus, inversions based on constant-elevation reference surfaces may not properly estimate the horizontal position of a magma chamber. We have investigated an approach where the elevation of the reference surface varies for each computation point, corresponding to topography. For vertical displacements and tilts this method provides a good fit to the finite element results, and thus may form the basis for an inversion scheme. For radial displacements, a constant reference elevation provides a better fit to the numerical results.

In vivo articular cartilage deformation: noninvasive quantification of intratissue strain during joint contact in the human knee

NASA Astrophysics Data System (ADS)

Chan, Deva D.; Cai, Luyao; Butz, Kent D.; Trippel, Stephen B.; Nauman, Eric A.; Neu, Corey P.

2016-01-01

The in vivo measurement of articular cartilage deformation is essential to understand how mechanical forces distribute throughout the healthy tissue and change over time in the pathologic joint. Displacements or strain may serve as a functional imaging biomarker for healthy, diseased, and repaired tissues, but unfortunately intratissue cartilage deformation in vivo is largely unknown. Here, we directly quantified for the first time deformation patterns through the thickness of tibiofemoral articular cartilage in healthy human volunteers. Magnetic resonance imaging acquisitions were synchronized with physiologically relevant compressive loading and used to visualize and measure regional displacement and strain of tibiofemoral articular cartilage in a sagittal plane. We found that compression (of 1/2 body weight) applied at the foot produced a sliding, rigid-body displacement at the tibiofemoral cartilage interface, that loading generated subject- and gender-specific and regionally complex patterns of intratissue strains, and that dominant cartilage strains (approaching 12%) were in shear. Maximum principle and shear strain measures in the tibia were correlated with body mass index. Our MRI-based approach may accelerate the development of regenerative therapies for diseased or damaged cartilage, which is currently limited by the lack of reliable in vivo methods for noninvasive assessment of functional changes following treatment.

Patterns of oribatid mite species diversity: testing the effects of elevation, area and sampling effort.

PubMed

Mumladze, Levan; Murvanidze, Maka; Maraun, Mark

2017-07-01

Elevational gradients in species diversity and species area relationships are two well established patterns that are not mutually exclusive in space and time. Elevation and area are both considered as good proxies to detect and characterize the patterns of species diversity distribution. However, such studies are hampered by the incomplete biodiversity data available for ecologists, which may affect the pattern perceptions. Using the large dataset of oribatid mite communities sampled in Georgia, we tested the effects of altitude and area on species distribution using various approaches, while explicitly considering the biases from sampling effort. Our results showed that elevation and area are strongly correlated (with increasing absolute elevation, land area decreases) and both have strong linear effects on species diversity distribution when studied separately. Approaches based on multiple regression and direct removal of co-varied factors, indicated that the effect of area can actually override the effect of elevation in describing the oribatid species diversity distribution along with elevation. On the other hand, the bias of sampling proved significant in perception of elevational species richness pattern with less effect on elevational species area relationship. We suggest that the sampling alone may be responsible for patterns observed and thus should be considered in ecological studies when eligible.

A Diverse Range of Novel RNA Viruses in Geographically Distinct Honey Bee Populations

PubMed Central

Shi, Mang; Buchmann, Gabriele; Blacquière, Tjeerd; Beekman, Madeleine; Ashe, Alyson

2017-01-01

ABSTRACT Understanding the diversity and consequences of viruses present in honey bees is critical for maintaining pollinator health and managing the spread of disease. The viral landscape of honey bees (Apis mellifera) has changed dramatically since the emergence of the parasitic mite Varroa destructor, which increased the spread of virulent variants of viruses such as deformed wing virus. Previous genomic studies have focused on colonies suffering from infections by Varroa and virulent viruses, which could mask other viral species present in honey bees, resulting in a distorted view of viral diversity. To capture the viral diversity within colonies that are exposed to mites but do not suffer the ultimate consequences of the infestation, we examined populations of honey bees that have evolved naturally or have been selected for resistance to Varroa. This analysis revealed seven novel viruses isolated from honey bees sampled globally, including the first identification of negative-sense RNA viruses in honey bees. Notably, two rhabdoviruses were present in three geographically diverse locations and were also present in Varroa mites parasitizing the bees. To characterize the antiviral response, we performed deep sequencing of small RNA populations in honey bees and mites. This provided evidence of a Dicer-mediated immune response in honey bees, while the viral small RNA profile in Varroa mites was novel and distinct from the response observed in bees. Overall, we show that viral diversity in honey bee colonies is greater than previously thought, which encourages additional studies of the bee virome on a global scale and which may ultimately improve disease management. IMPORTANCE Honey bee populations have become increasingly susceptible to colony losses due to pathogenic viruses spread by parasitic Varroa mites. To date, 24 viruses have been described in honey bees, with most belonging to the order Picornavirales. Collapsing Varroa-infected colonies are often overwhelmed with high levels of picornaviruses. To examine the underlying viral diversity in honey bees, we employed viral metatranscriptomics analyses on three geographically diverse Varroa-resistant populations from Europe, Africa, and the Pacific. We describe seven novel viruses from a range of diverse viral families, including two viruses that are present in all three locations. In honey bees, small RNA sequences indicate that these viruses are processed by Dicer and the RNA interference pathway, whereas Varroa mites produce strikingly novel small RNA patterns. This work increases the number and diversity of known honey bee viruses and will ultimately contribute to improved disease management in our most important agricultural pollinator. PMID:28515299

A Diverse Range of Novel RNA Viruses in Geographically Distinct Honey Bee Populations.

PubMed

Remnant, Emily J; Shi, Mang; Buchmann, Gabriele; Blacquière, Tjeerd; Holmes, Edward C; Beekman, Madeleine; Ashe, Alyson

2017-08-15

Understanding the diversity and consequences of viruses present in honey bees is critical for maintaining pollinator health and managing the spread of disease. The viral landscape of honey bees ( Apis mellifera ) has changed dramatically since the emergence of the parasitic mite Varroa destructor , which increased the spread of virulent variants of viruses such as deformed wing virus. Previous genomic studies have focused on colonies suffering from infections by Varroa and virulent viruses, which could mask other viral species present in honey bees, resulting in a distorted view of viral diversity. To capture the viral diversity within colonies that are exposed to mites but do not suffer the ultimate consequences of the infestation, we examined populations of honey bees that have evolved naturally or have been selected for resistance to Varroa This analysis revealed seven novel viruses isolated from honey bees sampled globally, including the first identification of negative-sense RNA viruses in honey bees. Notably, two rhabdoviruses were present in three geographically diverse locations and were also present in Varroa mites parasitizing the bees. To characterize the antiviral response, we performed deep sequencing of small RNA populations in honey bees and mites. This provided evidence of a Dicer-mediated immune response in honey bees, while the viral small RNA profile in Varroa mites was novel and distinct from the response observed in bees. Overall, we show that viral diversity in honey bee colonies is greater than previously thought, which encourages additional studies of the bee virome on a global scale and which may ultimately improve disease management. IMPORTANCE Honey bee populations have become increasingly susceptible to colony losses due to pathogenic viruses spread by parasitic Varroa mites. To date, 24 viruses have been described in honey bees, with most belonging to the order Picornavirales Collapsing Varroa -infected colonies are often overwhelmed with high levels of picornaviruses. To examine the underlying viral diversity in honey bees, we employed viral metatranscriptomics analyses on three geographically diverse Varroa- resistant populations from Europe, Africa, and the Pacific. We describe seven novel viruses from a range of diverse viral families, including two viruses that are present in all three locations. In honey bees, small RNA sequences indicate that these viruses are processed by Dicer and the RNA interference pathway, whereas Varroa mites produce strikingly novel small RNA patterns. This work increases the number and diversity of known honey bee viruses and will ultimately contribute to improved disease management in our most important agricultural pollinator. Copyright © 2017 Remnant et al.

A phylogenetic perspective on species diversity, β-diversity and biogeography for the microbial world.

PubMed

Barberán, Albert; Casamayor, Emilio O

2014-12-01

There is an increasing interest to combine phylogenetic data with distributional and ecological records to assess how natural communities arrange under an evolutionary perspective. In the microbial world, there is also a need to go beyond the problematic species definition to deeply explore ecological patterns using genetic data. We explored links between evolution/phylogeny and community ecology using bacterial 16S rRNA gene information from a high-altitude lakes district data set. We described phylogenetic community composition, spatial distribution, and β-diversity and biogeographical patterns applying evolutionary relatedness without relying on any particular operational taxonomic unit definition. High-altitude lakes districts usually contain a large mosaic of highly diverse small water bodies and conform a fine biogeographical model of spatially close but environmentally heterogeneous ecosystems. We sampled 18 lakes in the Pyrenees with a selection criteria focused on capturing the maximum environmental variation within the smallest geographical area. The results showed highly diverse communities nonrandomly distributed with phylogenetic β-diversity patterns mainly shaped by the environment and not by the spatial distance. Community similarity based on both bacterial taxonomic composition and phylogenetic β-diversity shared similar patterns and was primarily structured by similar environmental drivers. We observed a positive relationship between lake area and phylogenetic diversity with a slope consistent with highly dispersive planktonic organisms. The phylogenetic approach incorporated patterns of common ancestry into bacterial community analysis and emerged as a very convenient analytical tool for direct inter- and intrabiome biodiversity comparisons and sorting out microbial habitats with potential application in conservation studies. © 2014 John Wiley & Sons Ltd.

Real-time subject-specific monitoring of internal deformations and stresses in the soft tissues of the foot: a new approach in gait analysis.

PubMed

Yarnitzky, G; Yizhar, Z; Gefen, A

2006-01-01

No technology is presently available to provide real-time information on internal deformations and stresses in plantar soft tissues of individuals during evaluation of the gait pattern. Because internal deformations and stresses in the plantar pad are critical factors in foot injuries such as diabetic foot ulceration, this severely limits evaluation of patients. To allow such real-time subject-specific analysis, we developed a hierarchal modeling system which integrates a two-dimensional gross structural model of the foot (high-order model) with local finite element (FE) models of the plantar tissue padding the calcaneus and medial metatarsal heads (low-order models). The high-order whole-foot model provides real-time analytical evaluations of the time-dependent plantar fascia tensile forces during the stance phase. These force evaluations are transferred, together with foot-shoe local reaction forces, also measured in real time (under the calcaneus, medial metatarsals and hallux), to the low-order FE models of the plantar pad, where they serve as boundary conditions for analyses of local deformations and stresses in the plantar pad. After careful verification of our custom-made FE solver and of our foot model system with respect to previous literature and against experimental results from a synthetic foot phantom, we conducted human studies in which plantar tissue loading was evaluated in real time during treadmill gait in healthy individuals (N = 4). We concluded that internal deformations and stresses in the plantar pad during gait cannot be predicted from merely measuring the foot-shoe force reactions. Internal loading of the plantar pad is constituted by a complex interaction between the anatomical structure and mechanical behavior of the foot skeleton and soft tissues, the body characteristics, the gait pattern and footwear. Real-time FE monitoring of internal deformations and stresses in the plantar pad is therefore required to identify elevated deformation/stress exposures toward utilizing it in gait laboratories to protect feet that are susceptible to injury.

Crustal Deformation During the 2011 Volanic Crisis of El Hierro, Canary Islands, Revealed by Continuous GPS Observation

NASA Astrophysics Data System (ADS)

Sagiya, T.; Barrancos Martinez, J.; Calvo, D.; Padron, E.; Hernandez, G. H.; Hernández, P. A.; Perez Rodriguez, N.; Suárez, J. M. P.

2012-04-01

Seismo-volcnic activity of El Hierro started in the middle of July of 2011 and resulted in the active submarine eruption after October 12 south off La Restinga, the southern tip of the island. We have been operating one continuous GPS site on the island since 2004. Responding to the activity, we quickly installed 5 more GPS sites. Including another site operated by the Canary Islands Cartograhical Service (GRAFCAN) for a cartographic purpose, we have been monitoring 7 GPS sites equipped with dual-frequency receivers. We present the result of our crustal deformation monitoring and the magmatic activity inferred from the deformation data. In accordance with the deformation pattern, we divide the volcanic activity in 2011 into 4 stages. The first stage is from the middle of July to middle of September, during which steady magmatic inflation is estimated at the center of the island. The inflated volume of the first stage is estimated to be about 1.3 X 107 m3 at the depth of about 5km. The second stage, which continued until the first submarine eruption on October 12, is characterized by the accelerated deformation due to the upward as well as southward migration of magma. Additional inflation of about 2.1 X 107 m3 occurred in the depth range of 1-2km. The third stage continued for about 3 weeks after the first submarine eruption. During this stage, submarine eruption continues while no significant surface deformation is observed. It is considered magma supply from a deeper magma chamber continued during this 3 weeks period. Therefore, the total inflation volume during the first two stages gives the minimum estimate for the total magma volume. Since the beginning of November 2011, many GPS sites started subsiding. However, this deflation pattern is quite different from those in the shallow inflation stages. Horizontal deformation during this 4th stage is not significant, implying that deflation is occurring below the moho.

Structural defects in natural plastically deformed diamonds: Evidence from EPR spectroscopy

NASA Astrophysics Data System (ADS)

Mineeva, R. M.; Titkov, S. V.; Speransky, A. V.

2009-06-01

Structural defects formed as a result of plastic deformation in natural diamond crystals have been studied by EPR spectroscopy. The spectra of brown, pink-brown, black-brown, pink-purple, and gray plastically deformed diamonds of type Ia from deposits in Yakutia and the Urals were recorded. The results of EPR spectroscopy allowed us to identify various deformation centers in the structure of natural diamonds and to show that nitrogen centers were transformed under epigenetic mechanical loading. Abundant A centers, consisting of two isomorphic nitrogen atoms located in neighboring structural sites, were destroyed as a result of this process to form a series of N1, N4, W7, M2, and M3 nitrogen centers. Such centers are characterized by an anisotropic spatial distribution and a positive charge, related to the mechanism of their formation. In addition, N2 centers (probably, deformation-produced dislocations decorated by nitrogen) were formed in all plastically deformed diamonds and W10 and W35 centers (the models have not been finally ascertained) were formed in some of them. It has been established that diamonds with various types of deformation-induced color contain characteristic associations of these deformation centers. The diversity of associations of deformation centers indicates appreciable variations in conditions of disintegration of deep-seated rocks, transfer of diamonds to the Earth’s surface, and formation of kimberlitic deposits. Depending on the conditions of mechanical loading, the diamond crystals were plastically deformed by either dislocation gliding or mechanical twinning. Characteristic features of plastic deformation by dislocation gliding are the substantial prevalence of the N2 centers over other deformation centers and the occurrence of the high-spin W10 and W35 centers. The attributes of less frequent plastic deformation by mechanical twinning are unusual localization of the M2 centers and, in some cases, the N1 centers in microtwinned lamellae. Numerous data on models of deformation centers in natural diamonds, including the M2 and M3 centers, which were observed in the studied collection for the first time, are discussed.

Basal Complex and Basal Venation of Odonata Wings: Structural Diversity and Potential Role in the Wing Deformation

PubMed Central

Rajabi, H.; Ghoroubi, N.; Malaki, M.; Darvizeh, A.; Gorb, S. N.

2016-01-01

Dragonflies and damselflies, belonging to the order Odonata, are known to be excellent fliers with versatile flight capabilities. The ability to fly over a wide range of speeds, high manoeuvrability and great agility are a few characteristics of their flight. The architecture of the wings and their structural elements have been found to play a major role in this regard. However, the precise influence of individual wing components on the flight performance of these insects remains unknown. The design of the wing basis (so called basal complex) and the venation of this part are responsible for particular deformability and specific shape of the wing blade. However, the wing bases are rather different in representatives of different odonate groups. This presumably reflects the dimensions of the wings on one hand, and different flight characteristics on the other hand. In this article, we develop the first three-dimensional (3D) finite element (FE) models of the proximal part of the wings of typical representatives of five dragonflies and damselflies families. Using a combination of the basic material properties of insect cuticle, a linear elastic material model and a nonlinear geometric analysis, we simulate the mechanical behaviour of the wing bases. The results reveal that although both the basal venation and the basal complex influence the structural stiffness of the wings, it is only the latter which significantly affects their deformation patterns. The use of numerical simulations enabled us to address the role of various wing components such as the arculus, discoidal cell and triangle on the camber formation in flight. Our study further provides a detailed representation of the stress concentration in the models. The numerical analysis presented in this study is not only of importance for understanding structure-function relationship of insect wings, but also might help to improve the design of the wings for biomimetic micro-air vehicles (MAVs). PMID:27513753

Bathymetric zonation and diversity gradient of gastropods and bivalves in West Antarctica from the South Shetland Islands to the Bellingshausen Sea

NASA Astrophysics Data System (ADS)

Aldea, Cristian; Olabarria, Celia; Troncoso, Jesús S.

2008-03-01

Depth-related zonation and diversity patterns are important topics in the study of deep-sea fauna, at both species and assemblage levels. These patterns may be attributed to complex and combined physical and/or biological factors. The lack of information about the West Antarctic deep sea is an important handicap to understanding the global-scale benthic diversity patterns. Detailed studies of the bathymetric distributions and diversity of deep-sea species in the Antarctic are needed to elucidate the factors contributing to global-scale benthic patterns. This study, based on a large data set, examined the bathymetric distribution, patterns of zonation and diversity-depth trends of gastropods and bivalves in West Antarctica, from the South Shetland Islands to the Bellingshausen Sea, a very poorly known area. A total of 647 individuals of gastropods belonging to 82 species and a total of 2934 individuals of bivalves belonging to 52 species were collected. Most gastropods showed discrete depth distributions, whereas most bivalves showed broader depth ranges. Replacement of species with depth was more gradual for bivalves than gastropods. Nevertheless, three bathymetric boundaries could be recognized: (1) a continental shelf zone from 0 to 400 m with a gradual rate of succession, (2) an upper slope zone from 400 to 800 m and (3) a lower slope zone from 800 to 2000 m, extending to 3300 m for bivalves. Diversity patterns were complex for both groups with no significant trends with depth.

Soil bacterial diversity patterns and drivers along an elevational gradient on Shennongjia Mountain, China

PubMed Central

Zhang, Yuguang; Cong, Jing; Lu, Hui; Li, Guangliang; Xue, Yadong; Deng, Ye; Li, Hui; Zhou, Jizhong; Li, Diqiang

2015-01-01

Understanding biological diversity elevational pattern and the driver factors are indispensable to develop the ecological theories. Elevational gradient may minimize the impact of environmental factors and is the ideal places to study soil microbial elevational patterns. In this study, we selected four typical vegetation types from 1000 to 2800 m above the sea level on the northern slope of Shennongjia Mountain in central China, and analysed the soil bacterial community composition, elevational patterns and the relationship between soil bacterial diversity and environmental factors by using the 16S rRNA Illumina sequencing and multivariate statistical analysis. The results revealed that the dominant bacterial phyla were Acidobacteria, Actinobacteria, Alphaproteobacteria, Betaproteobacteria, Gammaproteobacteria and Verrucomicrobia, which accounted for over 75% of the bacterial sequences obtained from tested samples, and the soil bacterial operational taxonomic unit (OTU) richness was a significant monotonous decreasing (P < 0.01) trend with the elevational increasing. The similarity of soil bacterial population composition decreased significantly (P < 0.01) with elevational distance increased as measured by the Jaccard and Bray–Curtis index. Canonical correspondence analysis and Mantel test analysis indicated that plant diversity and soil pH were significantly correlated (P < 0.01) with the soil bacterial community. Therefore, the soil bacterial diversity on Shennongjia Mountain had a significant and different elevational pattern, and plant diversity and soil pH may be the key factors in shaping the soil bacterial spatial pattern. PMID:26032124

How rheological heterogeneities control the internal deformation of salt giants.

NASA Astrophysics Data System (ADS)

Raith, Alexander; Urai, Janos L.

2017-04-01

Salt giants, like the North European Zechstein, consist of several evaporation cycles of different evaporites with highly diverse rheologies. Common Potassium and Magnesium (K-Mg) salt are typically 10 to 100 times less viscous as halite while stringers consisting of anhydrite and carbonates are about 100 times more viscous. In most parts, these mechanically layered bodies experienced complex deformation, resulting in large scale internal folding with ruptured stringers and shear zones, as observed in seismic images. Furthermore, locally varying evaporation history produced different mechanical stratigraphies across the salt basin. Although most of these extraordinary soft or strong layers are rather thin (<100 m) compared to the dominating halite, we propose they have first order control on the deformation and the resulting structures inside salt bodies. Numerical models representing different mechanical stratigraphies of hard and soft layers inside a salt body were performed to analyze their influence on the internal deformation during lateral salt flow. The results show that a continuous or fractured stringer is folded and thrusted during salt contraction while soft K-Mg salt layers act as internal décollement. Depending on the viscosity of the fractured stringers, the shortening is mostly compensated by either folding or thrusting. This folding has large control over the internal structure of the salt body imposing a dominating wavelength to the whole structure during early deformation. Beside strong stringers, K-Mg salt layers also influence the deformation and salt flow inside the salt pillow. Strain is accumulated in the soft layers leading to stronger salt flow near these layers and extensive deformation inside of them. Thus, if a soft layer is present near a stringer, it will experience more deformation. Additionally, the strong strain concentration in the soft layers could decouple parts of the salt body from the main deformation.

Fine-Scale Bacterial Beta Diversity within a Complex Ecosystem (Zodletone Spring, OK, USA): The Role of the Rare Biosphere

PubMed Central

Youssef, Noha H.; Couger, M. B.; Elshahed, Mostafa S.

2010-01-01

Background The adaptation of pyrosequencing technologies for use in culture-independent diversity surveys allowed for deeper sampling of ecosystems of interest. One extremely well suited area of interest for pyrosequencing-based diversity surveys that has received surprisingly little attention so far, is examining fine scale (e.g. micrometer to millimeter) beta diversity in complex microbial ecosystems. Methodology/Principal Findings We examined the patterns of fine scale Beta diversity in four adjacent sediment samples (1mm apart) from the source of an anaerobic sulfide and sulfur rich spring (Zodletone spring) in southwestern Oklahoma, USA. Using pyrosequencing, a total of 292,130 16S rRNA gene sequences were obtained. The beta diversity patterns within the four datasets were examined using various qualitative and quantitative similarity indices. Low levels of Beta diversity (high similarity indices) were observed between the four samples at the phylum-level. However, at a putative species (OTU0.03) level, higher levels of beta diversity (lower similarity indices) were observed. Further examination of beta diversity patterns within dominant and rare members of the community indicated that at the putative species level, beta diversity is much higher within rare members of the community. Finally, sub-classification of rare members of Zodletone spring community based on patterns of novelty and uniqueness, and further examination of fine scale beta diversity of each of these subgroups indicated that members of the community that are unique, but non novel showed the highest beta diversity within these subgroups of the rare biosphere. Conclusions/Significance The results demonstrate the occurrence of high inter-sample diversity within seemingly identical samples from a complex habitat. We reason that such unexpected diversity should be taken into consideration when exploring gamma diversity of various ecosystems, as well as planning for sequencing-intensive metagenomic surveys of highly complex ecosystems. PMID:20865128

Optomechanics of two- and three-dimensional soft photonic crystals

NASA Astrophysics Data System (ADS)

Krishnan, Dwarak

Soft photonic crystals are a class of periodic dielectric structures that undergo highly nonlinear deformation due to strain or other external stimulus such as temperature, pH etc. This can in turn dramatically affect optical properties such as light transmittance. Moreover certain classes of lithographically fabricated structures undergo some structural distortion due to the effects of processing, eventually affecting the optical properties of the final photonic crystal. In this work, we study the deformation mechanics of soft photonic crystal structures using realistic physics-based models and leverage that understanding to explain the optomechanics of actual 2-D and 3-D soft photonic crystals undergoing similar symmetry breaking nonlinear deformations. We first study the optomechanics of two classes of 3-D soft photonic crystals: (1) hydrogel and (2) elastomer based material systems. The hydrogel based inverse face-centered-cubic structure undergoes swelling with change in pH of the surrounding fluid. The inverse structure is a network of bulky domains with thin ligament-like connections, and it undergoes a pattern transformation from FCC to L11 as a result of swelling. A continuum scale poroelasticity based coupled fluid-diffusion FEM model is developed to accurately predict this mechanical behavior. Light transmittance simulation results qualitatively explain the experimentally observed trends in the optical behavior with pH change. The elastomer based, lithographically fabricated material experiences shrinkage induced distortion upon processing. This behavior is modeled using FEM with the material represented by a neo-Hookean constitutive law. The light transmittance calculations for normal incidence are carried out using the transfer matrix method and a good comparison is obtained for the positions of first and second order reflectance peaks. A unit cell based approach is taken to compute the photonic bandstructure to estimate light propagation through the structure for other angles of light incidence. To obtain a detailed picture of the change in optical properties due to a pattern transformation, we study simple 2-D elastomer photonic crystals which undergo an interesting structural pattern transformation from simple circular holes to alternately oriented ellipses in a square lattice due to uniaxial compression. The incident light does not have any effect on the properties of the elastomer material. A decomposition of the deformation gradient quickly shows that the pattern transformation is induced by alternating rotations of the interstitial regions and the bending of interconnecting ligaments. Numerical simulations of light transmittance using vector element based FEM analysis of Maxwells equations shows changes in the light energy localization within the material especially in the high energy/low wavelength regions of the spectra. Additionally, with bandstructure calculations on a unit cell of the structure, the optomechanical behavior is completely explained. Finally, computational evidence is provided for a hypothetical 2-D photonic crystal made of a light-sensitive material, which undergoes a structural pattern transformation primarily due to the effect of incident light. The model takes into account the order kinetics of optically induced isomerization (of trans to cis configuration) in the azobenzene-liquid crystal elastomer to compute the transformational strain. This strain, in turn, deforms the structure and hence changes its periodicity and dielectric properties and thus affects the manner in which light gets localized within the material system. This consequently changes the profile of the imposed transformational strain on the deformed structure. The macroscopic strain history shows that prior to the mechanical instability that causes the pattern transformation, there is a period of structural relaxation which initiates the pattern transformation. After the symmetry breaking pattern transformation, the photonic bandstructure is altered significantly. Light does not get localized in the spot regions anymore and stress relaxation dominates. Due to this, the compressive macroscopic strain of the pattern transformed structure starts to decrease indicating a possible cyclical behavior.

Genomic determinants of epidermal appendage patterning and structure in domestic birds

PubMed Central

Boer, Elena F.; Van Hollebeke, Hannah F.; Shapiro, Michael D.

2017-01-01

Variation in regional identity, patterning, and structure of epidermal appendages contributes to skin diversity among many vertebrate groups, and is perhaps most striking in birds. In pioneering work on epidermal appendage patterning, John Saunders and his contemporaries took advantage of epidermal appendage diversity within and among domestic chicken breeds to establish the importance of mesoderm-ectoderm signaling in determining skin patterning. Diversity in chickens and other domestic birds, including pigeons, is driving a new wave of research to dissect the molecular genetic basis of epidermal appendage patterning. Domestic birds are not only outstanding models for embryonic manipulations, as Saunders recognized, but they are also ideal genetic models for discovering the specific genes that control normal development and the mutations that contribute to skin diversity. Here, we review recent genetic and genomic approaches to uncover the basis of epidermal macropatterning, micropatterning, and structural variation. We also present new results that confirm expression changes in two limb identity genes in feather-footed pigeons, a case of variation in appendage structure and identity. PMID:28347644

Biogeographic patterns in below-ground diversity in New York City's Central Park are similar to those observed globally

PubMed Central

Ramirez, Kelly S.; Leff, Jonathan W.; Barberán, Albert; Bates, Scott Thomas; Betley, Jason; Crowther, Thomas W.; Kelly, Eugene F.; Oldfield, Emily E.; Shaw, E. Ashley; Steenbock, Christopher; Bradford, Mark A.; Wall, Diana H.; Fierer, Noah

2014-01-01

Soil biota play key roles in the functioning of terrestrial ecosystems, however, compared to our knowledge of above-ground plant and animal diversity, the biodiversity found in soils remains largely uncharacterized. Here, we present an assessment of soil biodiversity and biogeographic patterns across Central Park in New York City that spanned all three domains of life, demonstrating that even an urban, managed system harbours large amounts of undescribed soil biodiversity. Despite high variability across the Park, below-ground diversity patterns were predictable based on soil characteristics, with prokaryotic and eukaryotic communities exhibiting overlapping biogeographic patterns. Further, Central Park soils harboured nearly as many distinct soil microbial phylotypes and types of soil communities as we found in biomes across the globe (including arctic, tropical and desert soils). This integrated cross-domain investigation highlights that the amount and patterning of novel and uncharacterized diversity at a single urban location matches that observed across natural ecosystems spanning multiple biomes and continents. PMID:25274366

Evaluating links between deformation, topography and surface temperature at volcanic domes: Results from a multi-sensor study at Volcán de Colima, Mexico

NASA Astrophysics Data System (ADS)

Salzer, Jacqueline T.; Milillo, Pietro; Varley, Nick; Perissin, Daniele; Pantaleo, Michele; Walter, Thomas R.

2017-12-01

Dome building activity is common at many volcanoes and due to the gravitational instability, a dome represents one of the most hazardous volcanic phenomena. Shallow volcanic processes as well as rheological and structural changes of the dome affecting the fluid transport have been linked to transitions in eruptive activity. Also, hydrothermal alteration may affect the structural integrity of the dome, increasing the potential for collapse. However, mapping the deformation and details of fluid escape at the summit of steep sloped volcanoes and integrating these with other types of data is challenging due to difficult access and poor coverage. Here we present for the first time the near-vertical and near-horizontal surface deformation field of a quiescent summit dome and the relationships with degassing and topographic patterns. Our results are derived from high resolution satellite radar interferometry (InSAR) time series based on a year of TerraSAR-X SpotLight acquisitions and Structure from Motion (SfM) processing of overflight infrared data at Volcán de Colima, Mexico. The identified deformation is dominated by localized heterogeneous subsidence of the summit dome exceeding rates of 15 cm/yr, and strongly decreasing over the year 2012, up to the renewal of explosive and extrusive activity in early 2013. We tentatively attribute the deformation to the degassing, cooling and contraction of the dome and shallow conduit material. We also find that the results strongly differ depending on the chosen InSAR time series method, which potentially overprints the true physical complexities of small scale, shallow deformation processes. The combined interpretation of the deformation and infrared data reveals a complex spatial relationship between the degassing pathways and the deformation. While we observe no deformation across the crater rim fumaroles, discontinuities in the deformation field are more commonly observed around the dome rim fumaroles and occasionally on the dome upper surface. We propose that the deformation pattern is also linked to processes controlling the fumarole formation and distribution (topography, permeability and volcanic activity), and the lack of direct relationships may be explained by how the influence of these processes varies across the volcanic summit. The presented work provides a new approach for safely monitoring the activity and stability of internal dome structures, as well as for constraining and validating models of dome degassing pathways and densification processes.

Patterns and drivers of bacterial α- and β-diversity across vertical profiles from surface to subsurface sediments.

PubMed

Luna, Gian Marco; Corinaldesi, Cinzia; Rastelli, Eugenio; Danovaro, Roberto

2013-10-01

We investigated the patterns and drivers of bacterial α- and β-diversity, along with viral and prokaryotic abundance and the carbon production rates, in marine surface and subsurface sediments (down to 1 m depth) in two habitats: vegetated sediments (seagrass meadow) and non-vegetated sediments. Prokaryotic abundance and production decreased with depth in the sediment, but cell-specific production rates and the virus-to-prokaryote ratio increased, highlighting unexpectedly high activity in the subsurface. The highest diversity was observed in vegetated sediments. Bacterial β-diversity between sediment horizons was high, and only a minor number of taxa was shared between surface and subsurface layers. Viruses significantly contributed to explain α- and β-diversity patterns. Despite potential limitations due to the only use of fingerprinting techniques, this study indicates that the coastal subsurface host highly active and diversified bacterial assemblages, that subsurface cells are more active than expected and that viruses promote β-diversity and stimulate bacterial metabolism in subsurface layers. The limited number of taxa shared between habitats, and between surface and subsurface sediment horizons, suggests that future investigations of the shallow subsurface will provide insights into the census of bacterial diversity, and the comprehension of the patterns and drivers of prokaryotic diversity in marine ecosystems. © 2013 John Wiley & Sons Ltd and Society for Applied Microbiology.

Evolution of the Rembrandt impact basin on Mercury.

PubMed

Watters, Thomas R; Head, James W; Solomon, Sean C; Robinson, Mark S; Chapman, Clark R; Denevi, Brett W; Fassett, Caleb I; Murchie, Scott L; Strom, Robert G

2009-05-01

MESSENGER's second Mercury flyby revealed a ~715-kilometer-diameter impact basin, the second-largest well-preserved basin-scale impact structure known on the planet. The Rembrandt basin is comparable in age to the Caloris basin, is partially flooded by volcanic plains, and displays a unique wheel-and-spoke-like pattern of basin-radial and basin-concentric wrinkle ridges and graben. Stratigraphic relations indicate a multistaged infilling and deformational history involving successive or overlapping phases of contractional and extensional deformation. The youngest deformation of the basin involved the formation of a approximately 1000-kilometer-long lobate scarp, a product of the global cooling and contraction of Mercury.

Waiting in the wings: what can we learn about gene co-option from the diversification of butterfly wing patterns?

PubMed

Jiggins, Chris D; Wallbank, Richard W R; Hanly, Joseph J

2017-02-05

A major challenge is to understand how conserved gene regulatory networks control the wonderful diversity of form that we see among animals and plants. Butterfly wing patterns are an excellent example of this diversity. Butterfly wings form as imaginal discs in the caterpillar and are constructed by a gene regulatory network, much of which is conserved across the holometabolous insects. Recent work in Heliconius butterflies takes advantage of genomic approaches and offers insights into how the diversification of wing patterns is overlaid onto this conserved network. WntA is a patterning morphogen that alters spatial information in the wing. Optix is a transcription factor that acts later in development to paint specific wing regions red. Both of these loci fit the paradigm of conserved protein-coding loci with diverse regulatory elements and developmental roles that have taken on novel derived functions in patterning wings. These discoveries offer insights into the 'Nymphalid Ground Plan', which offers a unifying hypothesis for pattern formation across nymphalid butterflies. These loci also represent 'hotspots' for morphological change that have been targeted repeatedly during evolution. Both convergent and divergent evolution of a great diversity of patterns is controlled by complex alleles at just a few genes. We suggest that evolutionary change has become focused on one or a few genetic loci for two reasons. First, pre-existing complex cis-regulatory loci that already interact with potentially relevant transcription factors are more likely to acquire novel functions in wing patterning. Second, the shape of wing regulatory networks may constrain evolutionary change to one or a few loci. Overall, genomic approaches that have identified wing patterning loci in these butterflies offer broad insight into how gene regulatory networks evolve to produce diversity.This article is part of the themed issue 'Evo-devo in the genomics era, and the origins of morphological diversity'. © 2016 The Author(s).

Indentation tectonics in northern Taiwan: insights from field observations and analog models

NASA Astrophysics Data System (ADS)

Lu, Chia-Yu; Lee, Jian-Cheng; Malavieille, Jacques

2017-04-01

In northern Taiwan, contraction, extension, transcurrent shearing, and block rotation are four major tectonic deformation mechanisms involved in the progressive deformation of this arcuate mountain belt. The recent evolution of the orogen is controlled not only by the oblique convergence between the Eurasian plate and the Philippine Sea plate but also by the corner shape of the plate boundary. Based on field observations, analyses, geophysical data (mostly GPS) and results of experimental models, we interpret the curved shape of northern Taiwan as a result of contractional deformation (involving imbricate thrusting and folding, backthrusting and backfolding). The subsequent horizontal and vertical extrusion, combined with increasing transcurrent & rotational deformation (bookshelf-type strike-slip faulting and block rotation) induced transcurrent/ rotational extrusion and extrusion related extensional deformation. A special type of extrusional folds characterizes that complex deformation regime. The tectonics in northern Taiwan reflects a single, regional pattern of deformation. The crescent-shaped mountain belt develops in response to oblique indentation by an asymmetric wedge indenter, retreat of Ryukyu trench and opening of the Okinawa trough. Three sets of analog sandbox models are presented to illustrate the development of tectonic structures and their kinematic evolution

Microstructural change in electroformed copper liners of shaped charges upon plastic deformation at ultra-high strain rate

NASA Astrophysics Data System (ADS)

Tian, W. H.; Hu, S. L.; Fan, A. L.; Wang, Z.

2002-01-01

Transmission electron microscopy (TEM) observations were carried out for examining the as-formed and post-deformed microstructures in a variety of electroformed copper liners of shaped charges. The deformation was carried out at an ultra-high strain rate. Specifically, the electron backscattering Kikuchi pattern (EBSP) technique was utilized to examine the micro-texture of these materials. TEM observations revealed that these electroformed copper liners of shaped charges have a grain size of about 1-3 mum, EBSP analysis demonstrated that the as-grown copper liners of shaped charges exhibit a l 10) fiber micro-texture which is parallel to the normal direction of the surface of the liners of shaped charges. Having undergone plastic deformation at ultra-high strain rate (10(7) s(-1)), the specimens which were recovered from the copper slugs were found to have grain size of the same order as that before deformation. EBSP analysis revealed that the (110) fiber texture existed in the as-formed copper liners disappears in the course of deformation. TEM examination results indicate that dynamic recovery and recrystallization play a significant role in this deformation process.

An experimental approach to non - extensive statistical physics and Epidemic Type Aftershock Sequence (ETAS) modeling. The case of triaxially deformed sandstones using acoustic emissions.

NASA Astrophysics Data System (ADS)

Stavrianaki, K.; Vallianatos, F.; Sammonds, P. R.; Ross, G. J.

2014-12-01

Fracturing is the most prevalent deformation mechanism in rocks deformed in the laboratory under simulated upper crustal conditions. Fracturing produces acoustic emissions (AE) at the laboratory scale and earthquakes on a crustal scale. The AE technique provides a means to analyse microcracking activity inside the rock volume and since experiments can be performed under confining pressure to simulate depth of burial, AE can be used as a proxy for natural processes such as earthquakes. Experimental rock deformation provides us with several ways to investigate time-dependent brittle deformation. Two main types of experiments can be distinguished: (1) "constant strain rate" experiments in which stress varies as a result of deformation, and (2) "creep" experiments in which deformation and deformation rate vary over time as a result of an imposed constant stress. We conducted constant strain rate experiments on air-dried Darley Dale sandstone samples in a variety of confining pressures (30MPa, 50MPa, 80MPa) and in water saturated samples with 20 MPa initial pore fluid pressure. The results from these experiments used to determine the initial loading in the creep experiments. Non-extensive statistical physics approach was applied to the AE data in order to investigate the spatio-temporal pattern of cracks close to failure. A more detailed study was performed for the data from the creep experiments. When axial stress is plotted against time we obtain the trimodal creep curve. Calculation of Tsallis entropic index q is performed to each stage of the curve and the results are compared with the ones from the constant strain rate experiments. The Epidemic Type Aftershock Sequence model (ETAS) is also applied to each stage of the creep curve and the ETAS parameters are calculated. We investigate whether these parameters are constant across all stages of the curve, or whether there are interesting patterns of variation. This research has been co-funded by the European Union (European Social Fund) and Greek national resources under the framework of the "THALES Program: SEISMO FEAR HELLARC" project of the "Education & Lifelong Learning" Operational Programme.

Principle component analysis to separate deformation signals from multiple sources during a 2015 intrusive sequence at Kīlauea Volcano

NASA Astrophysics Data System (ADS)

Johanson, I. A.; Miklius, A.; Poland, M. P.

2016-12-01

A sequence of magmatic events in April-May 2015 at Kīlauea Volcano produced a complex deformation pattern that can be described by multiple deforming sources, active simultaneously. The 2015 intrusive sequence began with inflation in the volcano's summit caldera near Halema`uma`u (HMM) Crater, which continued over a few weeks, followed by rapid deflation of the HMM source and inflation of a source in the south caldera region during the next few days. In Kīlauea Volcano's summit area, multiple deformation centers are active at varying times, and all contribute to the overall pattern observed with GPS, tiltmeters, and InSAR. Isolating the contribution of different signals related to each source is a challenge and complicates the determination of optimal source geometry for the underlying magma bodies. We used principle component analysis of continuous GPS time series from the 2015 intrusion sequence to determine three basis vectors which together account for 83% of the variance in the data set. The three basis vectors are non-orthogonal and not strictly the principle components of the data set. In addition to separating deformation sources in the continuous GPS data, the basis vectors provide a means to scale the contribution of each source in a given interferogram. This provides an additional constraint in a joint model of GPS and InSAR data (COSMO-SkyMed and Sentinel-1A) to determine source geometry. The first basis vector corresponds with inflation in the south caldera region, an area long recognized as the location of a long-term storage reservoir. The second vector represents deformation of the HMM source, which is in the same location as a previously modeled shallow reservoir, however InSAR data suggest a more complicated source. Preliminary modeling of the deformation attributed to the third basis vector shows that it is consistent with inflation of a steeply dipping ellipsoid centered below Keanakāko`i crater, southeast of HMM. Keanakāko`i crater is the locus of a known, intermittently active deformation source, which was not previously recognized to have been active during the 2015 event.

Intracontinental Deformation in the NW Iranian Plateau and Comparisons with the Northern Margin of the Tibetan Plateau

NASA Astrophysics Data System (ADS)

Chen, L.; Jiang, M.; Talebian, M.; Wan, B.; Ai, Y.; Ghods, A.; Sobouti, F.; Xiao, W.; Zhu, R.

2017-12-01

This study investigates the intracontinental deformation and its relationship with the structure of the crust and uppermost mantle in the NW Iranian plateau by combining new seismic and geological observations, to understand how this part of the plateau deformed to accommodate the Arabia-Eurasia plate collision and how the property of the lithosphere controls the deformation pattern. In contrast to the adjacent Anatolian block that exhibits westward large-scale extrusion, the northwesternmost part of the Iranian plateau shows dispersed intracontinental deformations with the development of numerous small-scale and discontinuous right-lateral strike-slip faults. The dispersed surface structures and deformation pattern correspond well to the active volcanism and seismically slow crust and uppermost mantle, and hence a weak lithosphere of the area. Further to the southeast are the western part of the Alborz Mountains and the southern Caspian Sea, both of which are characterized by stronger and more rigid lithosphere with relatively fast crust and uppermost mantle and absence of Quaternary volcanoes. A sharp Moho offset of 18 km has been imaged at the border of the Alborz and southern Caspian Sea using teleseismic receiver function data from a dense seismic array deployed under a collaborative project named "China-Iran Geological and Geophysical Survey in the Iranian Plateau (CIGSIP)". The sharp Moho offset and the minor undulations of the Moho on both sides indicate insignificant intracrustal deformation but mainly relative crustal movements between the Alborz Mountains and southern Caspian Sea, a behavior consistent with the relatively rigid nature of the lithosphere. Similar Moho offsets and lithospheric structures have been reported at the borders between the Kunlun Mountains and Qaidam or Tarim Basins in the northern margin of the Tibetan plateau, suggesting the occurrence of relative crustal movements with the effects of rigid continental lithosphere in the region. The new observations in the NW Iranian plateau combined with those in the Tibetan plateau thus provide solid evidence that intracontinental deformation is primarily controlled by the structure and properties of the continental lithosphere that may or may not have been severely altered by the collisional processes at plate margins.

What Do Observations of Postseismic Deformation Tell us About the Rheology of the Lithoshpere?

NASA Astrophysics Data System (ADS)

Fialko, Y.

2006-12-01

Geodetic observations in epicentral areas of large shallow earthquakes reveal transient displacements that typically have the same sense as the coseismic ones, but are about an order of magnitude smaller. A number of different mechanisms has been proposed to explain the observed time-dependent deformation, including afterslip on a deep extension of the seismic rupture, viscous-like response of a substrate below the brittle-ductile transition (e.g., the lower crust or upper mantle), and re-distribution of pore fluids in the upper crust. Distinguishing the relative contributions of these relaxation mechanisms is important before one can make robust inferences about the effective rheology of the upper part of the continental lithosphere. Either the bulk visco-elastic relaxation or afterslip is required to explain large horizontal displacements observed in the aftermath of large strike-slip earthquakes. Both temporal and spatial signatures of postseismic deformation were used to demonstrate that simple linear Maxwell rheologies are not adequate. For non-linear (e.g., powerlaw) rheologies, the surface deformation field may be indistinguishable from that due to afterslip at the early stages of relaxation, when the deformation is localized in high stress areas on the downdip continuation of the earthquake fault. However, at later stages of relaxation visco-elastic models predict appreciable changes in the displacement pattern. In particular, vertical velocities may change sign after viscous flow in the ductile substrate becomes more diffuse. Thus afterslip and non-linear visco-elastic models can be in principle distinguished given a sufficiently long observation period. Fluid flow and poro-elastic effects are incapable of explaining the observed horizontal deformation, but may substantially contribute to vertical postseismic motions, further complicating a discrimination between afterslip and visco-elastic relaxation. I will present space geodetic measurements of postseismic deformation due to several large earthquakes in California and Asia, and discuss implications from these measurements for the crust and upper mantle rheology. The main conclusion is that the deformation patterns are not consistent between different events, suggesting either various contributions from different relaxation mechanisms, or significant variations in crustal rheologies.

Towards a Millennial Time-scale Vertical Deformation Field in Taiwan

NASA Astrophysics Data System (ADS)

Bordovaos, P. A.; Johnson, K. M.

2015-12-01

Pete Bordovalos and Kaj M. Johnson To better understand the feedbacks between erosion and deformation in Taiwan, we need constraints on the millennial time-scale vertical field. Dense GPS and leveling data sets in Taiwan provide measurements of the present-day vertical deformation field over the entire Taiwan island. However, it is unclear how much of this vertical field is transient (varies over earthquake cycle) or steady (over millennial time scale). A deformation model is required to decouple transient from steady deformation. This study takes a look at how the 82 mm/yr of convergence motion between the Eurasian plate and the Philippine Sea plate is distributed across the faults on Taiwan. We build a plate flexure model that consists of all known active faults and subduction zones cutting through an elastic plate supported by buoyancy. We use horizontal and vertical GPS data, leveling data, and geologic surface uplift rates with a Monte Carlo probabilistic inversion method to infer fault slip rates and locking depths on all faults. Using our model we examine how different fault geometries influence the estimates of distribution of slip along faults and deformation patterns.

Fatigue crack tip deformation and fatigue crack propagation

NASA Technical Reports Server (NTRS)

Kang, T. S.; Liu, H. W.

1972-01-01

The effects of stress ratio, prestress cycling and plate thickness on the fatigue crack propagation rate are studied on 2024-T351 aluminum alloy. Fatigue crack propagation rate increases with the plate thickness and the stress ratio. Prestress cycling below the static yield strength has no noticeable effect on the fatigue crack propagation rate. However, prestress cycling above the static yield strength causes the material to strain harden and increases the fatigue crack propagation rate. Crack tip deformation is used to study the fatigue crack propagation. The crack tip strains and the crack opening displacements were measured from moire fringe patterns. The moire fringe patterns were obtained by a double exposure technique, using a very high density master grille (13,400 lines per inch).

Simulations of X-ray diffraction of shock-compressed single-crystal tantalum with synchrotron undulator sources.

PubMed

Tang, M X; Zhang, Y Y; E, J C; Luo, S N

2018-05-01

Polychromatic synchrotron undulator X-ray sources are useful for ultrafast single-crystal diffraction under shock compression. Here, simulations of X-ray diffraction of shock-compressed single-crystal tantalum with realistic undulator sources are reported, based on large-scale molecular dynamics simulations. Purely elastic deformation, elastic-plastic two-wave structure, and severe plastic deformation under different impact velocities are explored, as well as an edge release case. Transmission-mode diffraction simulations consider crystallographic orientation, loading direction, incident beam direction, X-ray spectrum bandwidth and realistic detector size. Diffraction patterns and reciprocal space nodes are obtained from atomic configurations for different loading (elastic and plastic) and detection conditions, and interpretation of the diffraction patterns is discussed.

Simulations of X-ray diffraction of shock-compressed single-crystal tantalum with synchrotron undulator sources

DOE Office of Scientific and Technical Information (OSTI.GOV)

Tang, M. X.; Zhang, Y. Y.; E, J. C.

Polychromatic synchrotron undulator X-ray sources are useful for ultrafast single-crystal diffraction under shock compression. Here, simulations of X-ray diffraction of shock-compressed single-crystal tantalum with realistic undulator sources are reported, based on large-scale molecular dynamics simulations. Purely elastic deformation, elastic–plastic two-wave structure, and severe plastic deformation under different impact velocities are explored, as well as an edge release case. Transmission-mode diffraction simulations consider crystallographic orientation, loading direction, incident beam direction, X-ray spectrum bandwidth and realistic detector size. Diffraction patterns and reciprocal space nodes are obtained from atomic configurations for different loading (elastic and plastic) and detection conditions, and interpretation of themore » diffraction patterns is discussed.« less

Large-Scale Diversity of Slope Fishes: Pattern Inconsistency between Multiple Diversity Indices

PubMed Central

Gaertner, Jean-Claude; Colloca, Francesco; Politou, Chrissi-Yianna; Gil De Sola, Luis; Bertrand, Jacques A.; Murenu, Matteo; Durbec, Jean-Pierre; Kallianiotis, Argyris; Mannini, Alessandro

2013-01-01

Large-scale studies focused on the diversity of continental slope ecosystems are still rare, usually restricted to a limited number of diversity indices and mainly based on the empirical comparison of heterogeneous local data sets. In contrast, we investigate large-scale fish diversity on the basis of multiple diversity indices and using 1454 standardized trawl hauls collected throughout the upper and middle slope of the whole northern Mediterranean Sea (36°3′- 45°7′ N; 5°3′W - 28°E). We have analyzed (1) the empirical relationships between a set of 11 diversity indices in order to assess their degree of complementarity/redundancy and (2) the consistency of spatial patterns exhibited by each of the complementary groups of indices. Regarding species richness, our results contrasted both the traditional view based on the hump-shaped theory for bathymetric pattern and the commonly-admitted hypothesis of a large-scale decreasing trend correlated with a similar gradient of primary production in the Mediterranean Sea. More generally, we found that the components of slope fish diversity we analyzed did not always show a consistent pattern of distribution according either to depth or to spatial areas, suggesting that they are not driven by the same factors. These results, which stress the need to extend the number of indices traditionally considered in diversity monitoring networks, could provide a basis for rethinking not only the methodological approach used in monitoring systems, but also the definition of priority zones for protection. Finally, our results call into question the feasibility of properly investigating large-scale diversity patterns using a widespread approach in ecology, which is based on the compilation of pre-existing heterogeneous and disparate data sets, in particular when focusing on indices that are very sensitive to sampling design standardization, such as species richness. PMID:23843962

Comparative phylogeography of eight herbs and lianas (Marantaceae) in central African rainforests.

PubMed

Ley, Alexandra C; Dauby, Gilles; Köhler, Julia; Wypior, Catherina; Röser, Martin; Hardy, Olivier J

2014-01-01

Vegetation history in tropical Africa is still to date hardly known and the drivers of population differentiation and speciation processes are little documented. It has often been postulated that population fragmentations following climate changes have played a key role in shaping the geographic distribution patterns of genetic diversity and in driving speciation. Here we analyzed phylogeographic patterns (chloroplast-DNA sequences) within and between eight (sister) species of widespread rainforest herbs and lianas from four genera of Marantaceae (Halopegia, Haumania, Marantochloa, Megaphrynium), searching for concordant patterns across species and concordance with the Pleistocene refuge hypothesis. Using 1146 plastid DNA sequences sampled across African tropical lowland rainforest, particularly in the Lower Guinean (LG) phytogeographic region, we analyzed intra- and interspecific patterns of genetic diversity, endemism and distinctiveness. Intraspecific patterns of haplotype diversity were concordant among most species as well as with the species-level diversity pattern of Marantaceae. Highest values were found in the hilly areas of Cameroon and Gabon. However, the spatial distribution of endemic haplotypes, an indicator for refuge areas in general, was not congruent across species. Each proposed refuge exhibited high values of endemism for one or a few species indicating their potential role as area of retraction for the respective species only. Thus, evolutionary histories seem to be diverse across species. In fact, areas of high diversity might have been both refuge and/or crossing zone of recolonization routes i.e., secondary contact zone. We hypothesize that retraction of species into one or the other refuge happened by chance depending on the species' distribution range at the time of climate deterioration. The idiosyncratic patterns found in Marantaceae species are similar to those found among tropical tree species, especially in southern LG.

Comparative phylogeography of eight herbs and lianas (Marantaceae) in central African rainforests

PubMed Central

Ley, Alexandra C.; Dauby, Gilles; Köhler, Julia; Wypior, Catherina; Röser, Martin; Hardy, Olivier J.

2014-01-01

Vegetation history in tropical Africa is still to date hardly known and the drivers of population differentiation and speciation processes are little documented. It has often been postulated that population fragmentations following climate changes have played a key role in shaping the geographic distribution patterns of genetic diversity and in driving speciation. Here we analyzed phylogeographic patterns (chloroplast-DNA sequences) within and between eight (sister) species of widespread rainforest herbs and lianas from four genera of Marantaceae (Halopegia, Haumania, Marantochloa, Megaphrynium), searching for concordant patterns across species and concordance with the Pleistocene refuge hypothesis. Using 1146 plastid DNA sequences sampled across African tropical lowland rainforest, particularly in the Lower Guinean (LG) phytogeographic region, we analyzed intra- and interspecific patterns of genetic diversity, endemism and distinctiveness. Intraspecific patterns of haplotype diversity were concordant among most species as well as with the species-level diversity pattern of Marantaceae. Highest values were found in the hilly areas of Cameroon and Gabon. However, the spatial distribution of endemic haplotypes, an indicator for refuge areas in general, was not congruent across species. Each proposed refuge exhibited high values of endemism for one or a few species indicating their potential role as area of retraction for the respective species only. Thus, evolutionary histories seem to be diverse across species. In fact, areas of high diversity might have been both refuge and/or crossing zone of recolonization routes i.e., secondary contact zone. We hypothesize that retraction of species into one or the other refuge happened by chance depending on the species' distribution range at the time of climate deterioration. The idiosyncratic patterns found in Marantaceae species are similar to those found among tropical tree species, especially in southern LG. PMID:25477901

Temporal and Spatial Diversity of Bacterial Communities in Coastal Waters of the South China Sea

PubMed Central

Du, Jikun; Xiao, Kai; Li, Li; Ding, Xian; Liu, Helu; Lu, Yongjun; Zhou, Shining

2013-01-01

Bacteria are recognized as important drivers of biogeochemical processes in all aquatic ecosystems. Temporal and geographical patterns in ocean bacterial communities have been observed in many studies, but the temporal and spatial patterns in the bacterial communities from the South China Sea remained unexplored. To determine the spatiotemporal patterns, we generated 16S rRNA datasets for 15 samples collected from the five regularly distributed sites of the South China Sea in three seasons (spring, summer, winter). A total of 491 representative sequences were analyzed by MOTHUR, yielding 282 operational taxonomic units (OTUs) grouped at 97% stringency. Significant temporal variations of bacterial diversity were observed. Richness and diversity indices indicated that summer samples were the most diverse. The main bacterial group in spring and summer samples was Alphaproteobacteria, followed by Cyanobacteria and Gammaproteobacteria, whereas Cyanobacteria dominated the winter samples. Spatial patterns in the samples were observed that samples collected from the coastal (D151, D221) waters and offshore (D157, D1512, D224) waters clustered separately, the coastal samples harbored more diverse bacterial communities. However, the temporal pattern of the coastal site D151 was contrary to that of the coastal site D221. The LIBSHUFF statistics revealed noticeable differences among the spring, summer and winter libraries collected at five sites. The UPGMA tree showed there were temporal and spatial heterogeneity of bacterial community composition in coastal waters of the South China Sea. The water salinity (P=0.001) contributed significantly to the bacteria-environment relationship. Our results revealed that bacterial community structures were influenced by environmental factors and community-level changes in 16S-based diversity were better explained by spatial patterns than by temporal patterns. PMID:23785512

Sub-second carbon-nanotube-mediated microwave sintering for high-conductivity silver patterns on plastic substrates

NASA Astrophysics Data System (ADS)

Jung, Sunshin; Chun, Su Jin; Han, Joong Tark; Woo, Jong Seok; Shon, Cha-Hwa; Lee, Geon-Woong

2016-02-01

A method of microwave sintering that is mediated by carbon nanotubes (CNTs) has been developed to obtain high-conductivity Ag patterns on the top of heat-sensitive plastic substrates within a short time. The Ag patterns are printed on CNTs formed on plastic substrates and rapidly heated to a great extent by the heat transferred from the microwave-heated CNTs. The conductivity of the microwave-sintered Ag patterns reaches ~39% that of bulk Ag within 1 s without substrate deformation. Furthermore, microwave sintering enhances the adhesion of Ag patterns to the thermoplastic substrates because the sintering causes interfacial fusion between the Ag patterns and the substrates, and CNTs physically connect the patterns with the substrates.A method of microwave sintering that is mediated by carbon nanotubes (CNTs) has been developed to obtain high-conductivity Ag patterns on the top of heat-sensitive plastic substrates within a short time. The Ag patterns are printed on CNTs formed on plastic substrates and rapidly heated to a great extent by the heat transferred from the microwave-heated CNTs. The conductivity of the microwave-sintered Ag patterns reaches ~39% that of bulk Ag within 1 s without substrate deformation. Furthermore, microwave sintering enhances the adhesion of Ag patterns to the thermoplastic substrates because the sintering causes interfacial fusion between the Ag patterns and the substrates, and CNTs physically connect the patterns with the substrates. Electronic supplementary information (ESI) available: Temperature difference in Ag/CNT/PC samples; the carbon content and electrical performance after microwave sintering; microwave sintering of Ag/CNT patterns; physical connection between the substrate and sintered Ag lines; touch-piano (figure and movie). See DOI: 10.1039/c5nr08082g

Patterns of Tree Species Diversity in Relation to Climatic Factors on the Sierra Madre Occidental, Mexico

PubMed Central

Silva-Flores, Ramón; Pérez-Verdín, Gustavo; Wehenkel, Christian

2014-01-01

Biological diversity can be defined as variability among living organisms from all sources, including terrestrial organisms, marine and other aquatic ecosystems, and the ecological complexes which they are part of. This includes diversity within species, between species, and of ecosystems. Numerous diversity indices combine richness and evenness in a single expression, and several climate-based explanations have been proposed to explain broad-scale diversity patterns. However, climate-based water-energy dynamics appears to be an essential factor that determines patterns of diversity. The Mexican Sierra Madre Occidental occupies an area of about 29 million hectares and is located between the Neotropical and Holarctic ecozones. It shelters a high diversity of flora, including 24 different species of Pinus (ca. 22% on the whole), 54 species of Quercus (ca. 9–14%), 7 species of Arbutus (ca. 50%) and many other trees species. The objectives of this study were to model how tree species diversity is related to climatic and geographic factors and stand density and to test the Metabolic Theory, Productivity-Diversity Hypothesis, Physiological Tolerance Hypothesis, Mid-Domain Effect, and the Water-Energy Dynamic Theory on the Sierra Madre Occidental, Durango. The results supported the Productivity-Diversity Hypothesis, Physiological Tolerance Hypothesis and Water-Energy Dynamic Theory, but not the Mid-Domain Effect or Metabolic Theory. The annual aridity index was the variable most closely related to the diversity indices analyzed. Contemporary climate was found to have moderate to strong effects on the minimum, median and maximum tree species diversity. Because water-energy dynamics provided a satisfactory explanation for the patterns of minimum, median and maximum diversity, an understanding of this factor is critical to future biodiversity research. Quantile regression of the data showed that the three diversity parameters of tree species are generally higher in cold, humid temperate climates than in dry, hot climates. PMID:25127455

Patterns of tree species diversity in relation to climatic factors on the Sierra Madre Occidental, Mexico.

PubMed

Silva-Flores, Ramón; Pérez-Verdín, Gustavo; Wehenkel, Christian

2014-01-01

Biological diversity can be defined as variability among living organisms from all sources, including terrestrial organisms, marine and other aquatic ecosystems, and the ecological complexes which they are part of. This includes diversity within species, between species, and of ecosystems. Numerous diversity indices combine richness and evenness in a single expression, and several climate-based explanations have been proposed to explain broad-scale diversity patterns. However, climate-based water-energy dynamics appears to be an essential factor that determines patterns of diversity. The Mexican Sierra Madre Occidental occupies an area of about 29 million hectares and is located between the Neotropical and Holarctic ecozones. It shelters a high diversity of flora, including 24 different species of Pinus (ca. 22% on the whole), 54 species of Quercus (ca. 9-14%), 7 species of Arbutus (ca. 50%) and many other trees species. The objectives of this study were to model how tree species diversity is related to climatic and geographic factors and stand density and to test the Metabolic Theory, Productivity-Diversity Hypothesis, Physiological Tolerance Hypothesis, Mid-Domain Effect, and the Water-Energy Dynamic Theory on the Sierra Madre Occidental, Durango. The results supported the Productivity-Diversity Hypothesis, Physiological Tolerance Hypothesis and Water-Energy Dynamic Theory, but not the Mid-Domain Effect or Metabolic Theory. The annual aridity index was the variable most closely related to the diversity indices analyzed. Contemporary climate was found to have moderate to strong effects on the minimum, median and maximum tree species diversity. Because water-energy dynamics provided a satisfactory explanation for the patterns of minimum, median and maximum diversity, an understanding of this factor is critical to future biodiversity research. Quantile regression of the data showed that the three diversity parameters of tree species are generally higher in cold, humid temperate climates than in dry, hot climates.

Diversity, abundance, and size structure of bivalve assemblages in the Sipsey River, Alabama

Treesearch

Wendell R. Haag; Melvin L. Jr. Warren

2010-01-01

1. Patterns of mussel diversity and assemblage structure in the Sipsey River, Alabama, are described. Qualitative data were used to describe river-wide patterns of diversity. Quantitative data were used to describe the structure of mussel assemblages at several sites based on whole-substrate sampling that ensured all size classes were detected. 2. Major human impacts...

Analysis of Land-Use Effects on Landscape Patterns and Biological Diversity in Pacific North Forests: 1972-1991

NASA Technical Reports Server (NTRS)

Wallin, David O.; Cohen, Warren B.; Bradshaw, G. A.; Spies, T. A.; Hansen, A.; Huff, M. H.; Lehmkuhl, J. F.; Raphael, M. G.; Ripple, W. J.

1998-01-01

While there is widespread recognition of the importance of preserving biological diversity there is considerable uncertainty about how to map current patterns of diversity and monitor changes through time. Ground-based approaches are impractical for examining regional patterns of biological diversity, for monitoring change, and they may actually overlook important higher-order phenomena. Thus, there is a critical need for innovative techniques to examine land-use effects on biological diversity at the landscape and regional scales. In this project, we have used satellite-based remote sensing to examine land-use effects on forest ecosystems in the Pacific NorthWest region (PNW) of the U.S.A. Rates and patterns of forest change throughout the region were quantified for the period from 1972 to 1993. This information was then used to map changes in the abundance and distribution of potential habitat for selected vertebrate species. The results of this project will be useful for identifying "keystone" stands that are important in maintaining habitat connectivity at the regional scale and for evaluating the impact of future land-use on vertebrate diversity throughout the region. The approaches developed here will also be useful in other forested regions throughout the world.

Knitted Patterns as a Model for Anisotropy

ERIC Educational Resources Information Center

Cepic, Mojca

2012-01-01

Anisotropy is a difficult concept, although it is often met in everyday life. This paper describes a simple model--knitted patterns--having anisotropic elastic properties. The elastic constant is measured for the force applied in different directions with respect to the knitting direction. It is also shown that the deformation of the knitted…

The dynamics of folding instability in a constrained Cosserat medium

NASA Astrophysics Data System (ADS)

Gourgiotis, Panos A.; Bigoni, Davide

2017-04-01

Different from Cauchy elastic materials, generalized continua, and in particular constrained Cosserat materials, can be designed to possess extreme (near a failure of ellipticity) orthotropy properties and in this way to model folding in a three-dimensional solid. Following this approach, folding, which is a narrow zone of highly localized bending, spontaneously emerges as a deformation pattern occurring in a strongly anisotropic solid. How this peculiar pattern interacts with wave propagation in the time-harmonic domain is revealed through the derivation of an antiplane, infinite-body Green's function, which opens the way to integral techniques for anisotropic constrained Cosserat continua. Viewed as a perturbing agent, the Green's function shows that folding, emerging near a steadily pulsating source in the limit of failure of ellipticity, is transformed into a disturbance with wavefronts parallel to the folding itself. The results of the presented study introduce the possibility of exploiting constrained Cosserat solids for propagating waves in materials displaying origami patterns of deformation. This article is part of the themed issue 'Patterning through instabilities in complex media: theory and applications.'

Prevalence of self-reported finger deformations and occupational risk factors among professional cooks: a cross-sectional study.

PubMed

Nagasu, Miwako; Sakai, Kazuhiro; Kogi, Kazutaka; Ito, Akiyoshi; Feskens, Edith J M; Tomita, Shigeru; Temmyo, Yoshiomi; Ueno, Mitsuo; Miyagi, Shigeji

2011-05-26

Previous studies have pointed out that the school lunch workers in Japan are suffering from work-related disorders including finger deformations. The purpose of this study was to investigate the prevalence of self-reported finger deformations and the association with job-related risk factors. A cross-sectional questionnaire study of 5,719 subjects (response rate: 81%, 982 men and 4,737 women) was undertaken during September 2003 to February 2004. Finger deformations were found among 11.7% of the men and 35.6% of the women studied, with significant differences among sex, age and sex-age groups. For both men and women the pattern of finger deformations across the hand was similar for the right and the left hand. For women, the deformations were found in about 10% of the distal interphalangeal joints of all fingers. Based on multiple logistic regression analyses, the factors female sex, age, the number of cooked lunches per cook and cooking activities were independently associated with the prevalence of finger deformations. High prevalence odds ratios were found for those frequently carrying or using tools by hands such as delivering containers, distributing meals, preparing dishes, washing equipment, cutting and stirring foods. Among the school lunch workers studied, women had a higher prevalence of finger deformations on all joints of both hands. Various cooking tasks were associated with the prevalence of finger deformations. The results suggest that improvements in working conditions are important for preventing work-related disorders such as finger deformations.

Detecting seismic anisotropy across the 410 km discontinuity through polarity and amplitude variations of the underside reflections

NASA Astrophysics Data System (ADS)

Saki, Morvarid; Thomas, Christine; Merkel, Sebastien; Wookey, James

2017-04-01

We investigate the effect of various types of deformation mechanisms on the reflection coefficients of P and S waves underside reflections off the 410 km discontinuity, to find a diagnostic tool to detect the style of deformation at boundary layers. We calculate the reflection coefficient for P and SH underside reflections depending on the variation in velocity perturbations across the 410 km discontinuity for two deformation scenarios, compression and shear for different azimuths and angles of incidence at the interface. The results show that in the case of an anisotropic olivine layer above an isotropic wadsleyite layer, the P wave reflection coefficient amplitudes are only slightly influenced by the joint effect of angle of incidence and the strength of imposed deformation, without any polarity reversal and for all deformation styles. For the SH wave underside reflections a more complicated behaviour is visible: In compressional deformation, a polarity reversal occurs at distances depending on the incidence angle and the intensity of applied deformation without any azimuthal dependency. However, for shear geometry the azimuth to the direction of deformation appears as an important factor which strongly affects the incidence angle at which the polarity reversal of the reflected S wave occurs. These differences in amplitude and polarity patterns of reflection coefficients of different deformation geometries, especially for S wave at shorter distances allow to detect the style of deformation mechanisms at a boundary layer.

Large-Scale Spatio-Temporal Patterns of Mediterranean Cephalopod Diversity

PubMed Central

Keller, Stefanie; Bartolino, Valerio; Hidalgo, Manuel; Bitetto, Isabella; Casciaro, Loredana; Cuccu, Danila; Esteban, Antonio; Garcia, Cristina; Garofalo, Germana; Josephides, Marios; Jadaud, Angelique; Lefkaditou, Evgenia; Maiorano, Porzia; Manfredi, Chiara; Marceta, Bojan; Massutí, Enric; Micallef, Reno; Peristeraki, Panagiota; Relini, Giulio; Sartor, Paolo; Spedicato, Maria Teresa; Tserpes, George; Quetglas, Antoni

2016-01-01

Species diversity is widely recognized as an important trait of ecosystems’ functioning and resilience. Understanding the causes of diversity patterns and their interaction with the environmental conditions is essential in order to effectively assess and preserve existing diversity. While diversity patterns of most recurrent groups such as fish are commonly studied, other important taxa such as cephalopods have received less attention. In this work we present spatio-temporal trends of cephalopod diversity across the entire Mediterranean Sea during the last 19 years, analysing data from the annual bottom trawl survey MEDITS conducted by 5 different Mediterranean countries using standardized gears and sampling protocols. The influence of local and regional environmental variability in different Mediterranean regions is analysed applying generalized additive models, using species richness and the Shannon Wiener index as diversity descriptors. While the western basin showed a high diversity, our analyses do not support a steady eastward decrease of diversity as proposed in some previous studies. Instead, high Shannon diversity was also found in the Adriatic and Aegean Seas, and high species richness in the eastern Ionian Sea. Overall diversity did not show any consistent trend over the last two decades. Except in the Adriatic Sea, diversity showed a hump-shaped trend with depth in all regions, being highest between 200–400 m depth. Our results indicate that high Chlorophyll a concentrations and warmer temperatures seem to enhance species diversity, and the influence of these parameters is stronger for richness than for Shannon diversity. PMID:26760965

Tectonic History of the Terrestrial Planets

NASA Technical Reports Server (NTRS)

Solomon, Sean C.

1993-01-01

The topics covered include the following: patterns of deformation and volcanic flows associated with lithospheric loading by large volcanoes on Venus; aspects of modeling the tectonics of large volcanoes on the terrestrial planets; state of stress, faulting, and eruption characteristics of large volcanoes on Mars; origin and thermal evolution of Mars; geoid-to-topography ratios on Venus; a tectonic resurfacing model for Venus; the resurfacing controversy for Venus; and the deformation belts of Lavinia Planitia.

Salt movements and faulting of the overburden - can numerical modeling predict the fault patterns above salt structures?

NASA Astrophysics Data System (ADS)

Clausen, O. R.; Egholm, D. L.; Wesenberg, R.

2012-04-01

Salt deformation has been the topic of numerous studies through the 20th century and up until present because of the close relation between commercial hydrocarbons and salt structure provinces of the world (Hudec & Jackson, 2007). The fault distribution in sediments above salt structures influences among other things the productivity due to the segmentation of the reservoir (Stewart 2006). 3D seismic data above salt structures can map such fault patterns in great detail and studies have shown that a variety of fault patterns exists. Yet, most patterns fall between two end members: concentric and radiating fault patterns. Here we use a modified version of the numerical spring-slider model introduced by Malthe-Sørenssen et al.(1998a) for simulating the emergence of small scale faults and fractures above a rising salt structure. The three-dimensional spring-slider model enables us to control the rheology of the deforming overburden, the mechanical coupling between the overburden and the underlying salt, as well as the kinematics of the moving salt structure. In this presentation, we demonstrate how the horizontal component on the salt motion influences the fracture patterns within the overburden. The modeling shows that purely vertical movement of the salt introduces a mesh of concentric normal faults in the overburden, and that the frequency of radiating faults increases with the amount of lateral movements across the salt-overburden interface. The two end-member fault patterns (concentric vs. radiating) can thus be linked to two different styles of salt movement: i) the vertical rising of a salt indenter and ii) the inflation of a 'salt-balloon' beneath the deformed strata. The results are in accordance with published analogue and theoretical models, as well as natural systems, and the model may - when used appropriately - provide new insight into how the internal dynamics of the salt in a structure controls the generation of fault patterns above the structure. The model is thus an important contribution to the understanding of small-scale faults, which may be unresolved by seismic data when the hydrocarbon production from reservoirs located above salt structures is optimized.

Deformation, static recrystallization, and reactive melt transport in shallow subcontinental mantle xenoliths (Tok Cenozoic volcanic field, SE Siberia)

NASA Astrophysics Data System (ADS)

Tommasi, Andréa; Vauchez, Alain; Ionov, Dmitri A.

2008-07-01

Partial melting and reactive melt transport may change the composition, microstructures, and physical properties of mantle rocks. Here we explore the relations between deformation and reactive melt transport through detailed microstructural analysis and crystallographic orientation measurements in spinel peridotite xenoliths that sample the shallow lithospheric mantle beneath the southeastern rim of the Siberian craton. These xenoliths have coarse-grained, annealed microstructures and show petrographic and chemical evidence for variable degrees of reaction with silicate melts and fluids, notably Fe-enrichment and crystallization of metasomatic clinopyroxene (cpx). Olivine crystal preferred orientations (CPO) range from strong to weak. [010]-fiber patterns, characterized by a point concentration of [010] normal to the foliation and by dispersion of [100] in the foliation plane with a weak maximum parallel to the lineation, predominate relative to the [100]-fiber patterns usually observed in lithospheric mantle xenoliths and peridotite massifs. Variations in olivine CPO patterns or intensity are not correlated with modal and chemical compositions. This, together with the analysis of microstructures, suggests that reactive melt percolation postdated both deformation and static recrystallization. Preferential crystallization of metasomatic cpx along (010) olivine grain boundaries points to an influence of the preexisting deformation fabrics on melt transport, with higher permeability along the foliation. Similarity between orthopyroxene (opx) and cpx CPO suggests that cpx orientations may be inherited from those of opx during melt-rock reaction. As observed in previous studies, reactive melt transport does not weaken olivine CPO and seismic anisotropy in the upper mantle, except in melt accumulation domains. In contrast, recovery and selective grain growth during static recrystallization may lead to development of [010]-fiber olivine CPO and, if foliations are horizontal, result in apparent isotropy for vertically propagating SKS waves, but strong anisotropy for horizontally propagating surface waves.

Inverse modeling of ground surface uplift and pressure with iTOUGH-PEST and TOUGH-FLAC: The case of CO2 injection at In Salah, Algeria

NASA Astrophysics Data System (ADS)

Rinaldi, Antonio P.; Rutqvist, Jonny; Finsterle, Stefan; Liu, Hui-Hai

2017-11-01

Ground deformation, commonly observed in storage projects, carries useful information about processes occurring in the injection formation. The Krechba gas field at In Salah (Algeria) is one of the best-known sites for studying ground surface deformation during geological carbon storage. At this first industrial-scale on-shore CO2 demonstration project, satellite-based ground-deformation monitoring data of high quality are available and used to study the large-scale hydrological and geomechanical response of the system to injection. In this work, we carry out coupled fluid flow and geomechanical simulations to understand the uplift at three different CO2 injection wells (KB-501, KB-502, KB-503). Previous numerical studies focused on the KB-502 injection well, where a double-lobe uplift pattern has been observed in the ground-deformation data. The observed uplift patterns at KB-501 and KB-503 have single-lobe patterns, but they can also indicate a deep fracture zone mechanical response to the injection. The current study improves the previous modeling approach by introducing an injection reservoir and a fracture zone, both responding to a Mohr-Coulomb failure criterion. In addition, we model a stress-dependent permeability and bulk modulus, according to a dual continuum model. Mechanical and hydraulic properties are determined through inverse modeling by matching the simulated spatial and temporal evolution of uplift to InSAR observations as well as by matching simulated and measured pressures. The numerical simulations are in agreement with both spatial and temporal observations. The estimated values for the parameterized mechanical and hydraulic properties are in good agreement with previous numerical results. In addition, the formal joint inversion of hydrogeological and geomechanical data provides measures of the estimation uncertainty.

Microfabric and Structures in Glacial Ice

NASA Astrophysics Data System (ADS)

Monz, M.; Hudleston, P. J.

2017-12-01

Similar to rocks in active orogens, glacial ice develops both structures and fabrics that reflect deformation. Crystallographic preferred orientation (CPO), associated with mechanical anisotropy, develops as ice deforms, and as in rock, directly reflects the conditions and mechanisms of deformation and influences the overall strength. This project aims to better constrain the rheologic properties of natural ice through microstructural analysis and to establish the relationship of microfabric to macroscale structures. The focus is on enigmatic fabric patterns found in coarse grained, "warm" (T > -10oC) ice deep in ice sheets and in valley glaciers. Deformation mechanisms that produce such patterns are poorly understood. Detailed mapping of surface structures, including bedding, foliation, and blue bands (bubble-free veins of ice), was done in the ablation zone of Storglaciären, a polythermal valley glacier in northern Sweden. Microstructural studies on samples from a transect across the ablation zone were carried out in a cold room. Crystal size was too large for use of electron backscattered diffraction to determine CPO, therefore a Rigsby universal stage, designed specifically for ice, was used. In thick and thin sections, recrystallized grains are locally variable in both size (1mm-7cm in one thin section) and shape and clearly reflect recrystallization involving highly mobile grain boundaries. Larger crystals are often branching, and appear multiple times throughout one thin section. There is a clear shape preferred orientation that is generally parallel with foliation defined by bubble alignment and concentration. Locally, there appears to be an inverse correlation between bubble concentration and smoothness of grain boundaries. Fabric in samples that have undergone prolonged shear display roughly symmetrical multimaxima patterns centered around the pole to foliation. The angular distances between maxima suggest a possible twin relationship that may have developed from a preexisting single-maximum fabric.

Inverse modeling of ground surface uplift and pressure with iTOUGH-PEST and TOUGH-FLAC: The case of CO2 injection at In Salah, Algeria

DOE PAGES

Rinaldi, Antonio P.; Rutqvist, Jonny; Finsterle, Stefan; ...

2016-10-24

Ground deformation, commonly seen in storage projects, carries useful information about processes occurring in the injection formation. The Krechba gas field at In Salah (Algeria) is one of the best-known sites for studying ground surface deformation during geological carbon storage. At this first industrial-scale on-shore CO 2 demonstration project, satellite-based ground-deformation monitoring data of high quality are available and used to study the large-scale hydrological and geomechanical response of the system to injection. In this work, we carry out coupled fluid flow and geomechanical simulations to understand the uplift at three different CO 2 injection wells (KB-501, KB-502, KB-503). Previousmore » numerical studies focused on the KB-502 injection well, where a double-lobe uplift pattern has been observed in the ground-deformation data. The observed uplift patterns at KB-501 and KB-503 have single-lobe patterns, but they can also indicate a deep fracture zone mechanical response to the injection.The current study improves the previous modeling approach by introducing an injection reservoir and a fracture zone, both responding to a Mohr-Coulomb failure criterion. In addition, we model a stress-dependent permeability and bulk modulus, according to a dual continuum model. Mechanical and hydraulic properties are determined through inverse modeling by matching the simulated spatial and temporal evolution of uplift to InSAR observations as well as by matching simulated and measured pressures. The numerical simulations are in agreement with both spatial and temporal observations. The estimated values for the parameterized mechanical and hydraulic properties are in good agreement with previous numerical results. In addition, the formal joint inversion of hydrogeological and geomechanical data provides measures of the estimation uncertainty.« less

Scale dependency of forest functional diversity assessed using imaging spectroscopy and airborne laser scanning

NASA Astrophysics Data System (ADS)

Schneider, F. D.; Morsdorf, F.; Schmid, B.; Petchey, O. L.; Hueni, A.; Schimel, D.; Schaepman, M. E.

2016-12-01

Forest functional traits offer a mechanistic link between ecological processes and community structure and assembly rules. However, measuring functional traits of forests in a continuous and consistent way is particularly difficult due to the complexity of in-situ measurements and geo-referencing. New imaging spectroscopy measurements overcome these limitations allowing to map physiological traits on broad spatial scales. We mapped leaf chlorophyll, carotenoids and leaf water content over 900 ha of temperate mixed forest (Fig. 1a). The selected traits are functionally important because they are indicating the photosynthetic potential of trees, leaf longevity and protection, as well as tree water and drought stress. Spatially continuous measurements on the scale of individual tree crowns allowed to assess functional diversity patterns on a range of ecological extents. We used indexes of functional richness, divergence and evenness to map different aspects of diversity. Fig. 1b shows an example of physiological richness at an extent of 240 m radius. We compared physiological to morphological diversity patterns, derived based on plant area index, canopy height and foliage height diversity. Our results show that patterns of physiological and morphological diversity generally agree, independently measured by airborne imaging spectroscopy and airborne laser scanning, respectively. The occurrence of disturbance areas and mixtures of broadleaf and needle trees were the main drivers of the observed diversity patterns. Spatial patterns at varying extents and richness-area relationships indicated that environmental filtering is the predominant community assembly process. Our results demonstrate the potential for mapping physiological and morphological diversity in a temperate mixed forest between and within species on scales relevant to study community assembly and structure from space and test the corresponding measurement schemes.

Contrasting species and functional beta diversity in montane ant assemblages.

PubMed

Bishop, Tom R; Robertson, Mark P; van Rensburg, Berndt J; Parr, Catherine L

2015-09-01

Beta diversity describes the variation in species composition between sites and can be used to infer why different species occupy different parts of the globe. It can be viewed in a number of ways. First, it can be partitioned into two distinct patterns: turnover and nestedness. Second, it can be investigated from either a species identity or a functional-trait point of view. We aim to document for the first time how these two aspects of beta diversity vary in response to a large environmental gradient. Maloti-Drakensberg Mountains, southern Africa. We sampled ant assemblages along an extensive elevational gradient (900-3000 m a.s.l.) twice yearly for 7 years, and collected functional-trait information related to the species' dietary and habitat-structure preferences. We used recently developed methods to partition species and functional beta diversity into their turnover and nestedness components. A series of null models were used to test whether the observed beta diversity patterns differed from random expectations. Species beta diversity was driven by turnover, but functional beta diversity was composed of both turnover and nestedness patterns at different parts of the gradient. Null models revealed that deterministic processes were likely to be responsible for the species patterns but that the functional changes were indistinguishable from stochasticity. Different ant species are found with increasing elevation, but they tend to represent an increasingly nested subset of the available functional strategies. This finding is unique and narrows down the list of possible factors that control ant existence across elevation. We conclude that diet and habitat preferences have little role in structuring ant assemblages in montane environments and that some other factor must be driving the non-random patterns of species turnover. This finding also highlights the importance of distinguishing between different kinds of beta diversity.

Numerical models of diapiric structures: comparison of the 2D finite deformation field between Rayleigh-Taylor like and down-built like diapirs

NASA Astrophysics Data System (ADS)

Fuchs, Lukas; Schmeling, Harro; Koyi, Hemin

2013-04-01

Magmatic and salt diapirs are common structures in different tectonic regimes. Salt diapirs can act as possible hydrocarbon traps and, moreover, they could be used as repositories for nuclear waste disposal. Understanding the evolution and the dynamics of diapirs as well as their driving mechanisms has fundamental and applied significance. In general, salt diapirs seem to be driven by differential loading of sediments creating an uneven load that drives the salt from high to low pressure areas, e.g. a down-built diapir. Magmatic diapirs, instead, seem to be driven by buoyancy where lighter material rises vertically through a heavier overburden, i.e. a classical Rayleigh-Taylor instability [RTI]. These different driving mechanisms and dynamics strongly govern the internal deformation of the diapirs. In this study, we use a two-dimensional finite difference code (FDCON) in combination with a marker and cell method to calculate the finite deformation within diapiric structures. Thereby, we distinguish between the two different driving mechanisms, i.e. the differential loading and the buoyancy. We calculate the different finite deformation patterns during the evolution of RTI's and down-built diapirs for different viscosity ratios m = -?buoyant- ?overburden. The deformation pattern in the buoyant layer shows similarities for both diapiric structures, like high shear deformation at the bottom, a high finite deformation within the middle of the stem, and an increasing maximum finite deformation for a decreasing m. However, the strain partitioning between the overburden and the source layer is different within down-built diapirs compared to the RTI's, even for down-built diapirs with m = 1. Thus a higher amount of the total strain induced by down-building is concentrated within the buoyant layer. Moreover, in the case of viscosity ratios of m = 0.1 or 1 the sinking overburden units create an internal rotation within the diapiric bulb. This rotation depends indirectly on the sedimentation rate as it determines the width of the sediment basin; the higher the sedimentation rate, the wider the basins and the weaker the internal rotation. In addition, the viscous drag between the sinking overburden and the rising diapir creates a stronger and wider band of finite deformation along the edges of the down-built diapir in comparison to the RTI.

Surface deformation associated with the 2013 Mw7.7 Balochistan earthquake: Geologic slip rates may significantly underestimate strain release

NASA Astrophysics Data System (ADS)

Gold, Ryan; Reitman, Nadine; Briggs, Richard; Barnhart, William; Hayes, Gavin

2015-04-01

The 24 September 2013 Mw7.7 Balochistan, Pakistan earthquake ruptured a ~200 km-long stretch of the 60° ± 15° northwest-dipping Hoshab fault in southern Pakistan. The earthquake is notable because it produced the second-largest lateral surface displacement observed for a continental strike-slip earthquake. Surface displacements and geodetic and teleseismic inversions indicate that peak slip occurred within the upper 0-3 km of the crust. To explore along-strike and fault-perpendicular surface deformation patterns, we remotely mapped the surface trace of the rupture and measured its surface deformation using high-resolution (0.5 m) pre- and post-event satellite imagery. Post-event images were collected 7-114 days following the earthquake, so our analysis captures the sum of both the coseismic and post-seismic (e.g., after slip) deformation. We document peak left-lateral offset of ~15 m using 289 near-field (±10 m from fault) laterally offset piercing points, such as streams, terrace risers, and roads. We characterize off-fault deformation by measuring the medium- (±200 m from fault) and far-field (±10 km from fault) displacement using manual (242 measurements) and automated image cross-correlation methods. Off-fault peak lateral displacement values (medium- and far-field) are ~16 m and commonly exceed the on-fault displacement magnitudes. Our observations suggest that coseismic surface displacement typically increases with distance away from the surface trace of the fault; however, the majority of surface displacement is within 100 m of the primary fault trace and is most localized on sections of the rupture exhibiting narrow (<5 m) zones of observable surface deformation. Furthermore, the near-field displacement measurements account for, on average, only 73% of the total coseismic displacement field and the pattern is highly heterogeneous. This analysis highlights the importance of identifying paleoseismic field study sites (e.g. trenches) that span fault sections with narrow deformation zones in order to capture the full deformation field. Our results imply that hazard analyses based on geologically-determined fault slip rates (e.g., near-field) should consider the significant and heterogeneous mismatch we document between on- and off-fault coseismic deformation.

Bio-Inspired Methods for Producing Adaptive Beampatterns with Diffracting Baffle Shapes

DTIC Science & Technology

The diversity of local shape features and their role in shaping the functional/ultrasonic characteristics of the noseleaves and pinnae in bats have...have been used to recreate active deformations of the noseleaf shapes that some bat species show as part of their biosonar behaviors and put the

Preferred orientation in experimentally deformed stishovite: implications for deformation mechanisms

DOE PAGES

Kaercher, Pamela M.; Zepeda-Alarcon, Eloisa; Prakapenka, Vitali B.; ...

2014-11-07

Although the crystal structure of the high pressure SiO 2 polymorph stishovite has been studied in detail, little is known about the development of crystallographic preferred orientation (CPO) during deformation in stishovite. Insight into CPO and associated deformation mechanics of stishovite would provide important information for understanding subduction of quartz-bearing crustal rocks into the mantle. To study CPO development, we converted a natural sample of flint to stishovite in a laser heated diamond anvil cell and compressed the stishovite aggregate up to 38 GPa. We collected diffraction patterns in radial geometry to examine in situ development of crystallographic preferred orientationmore » and find that (001) poles preferentially align with the compression direction. Viscoplastic self-consistent modeling suggests the most likely slip systems at high pressure and ambient temperature are pyramidal and basal slip.« less

Deformational Features and Microstructure Evolution of Copper Fabricated by a Single Pass of the Elliptical Cross-Section Spiral Equal-Channel Extrusion (ECSEE) Process

NASA Astrophysics Data System (ADS)

Wang, Chengpeng; Li, Fuguo; Liu, Juncheng

2018-04-01

The objectives of this work are to study the deformational feature, textures, microstructures, and dislocation configurations of ultrafine-grained copper processed by the process of elliptical cross-section spiral equal-channel extrusion (ECSEE). The deformation patterns of simple shear and pure shear in the ECSEE process were evaluated with the analytical method of geometric strain. The influence of the main technical parameters of ECSEE die on the effective strain distribution on the surface of ECSEE-fabricated samples was examined by the finite element simulation. The high friction factor could improve the effective strain accumulation of material deformation. Moreover, the pure copper sample fabricated by ECSEE ion shows a strong rotated cube shear texture. The refining mechanism of the dislocation deformation is dominant in copper processed by a single pass of ECSEE. The inhomogeneity of the micro-hardness distribution on the longitudinal section of the ECSEE-fabricated sample is consistent with the strain and microstructure distribution features.

Plastic Deformation as a Means to Achieve Stretchable Polymer Semiconductors

NASA Astrophysics Data System (ADS)

O'Connor, Brendan

Developing intrinsically stretchable semiconductors will seamlessly transition traditional devices into a stretchable platform. Polymer semiconductors are inherently soft materials due to the weak van der Waal intermolecular bonding allowing for flexible devices. However, these materials are not typically stretchable and when large strains are applied they either crack or plastically deform. Here, we study the use of repeated plastic deformation as a means of achieving stretchable films. In this talk, critical aspects of polymer semiconductor material selection, morphology and interface properties will be discussed that enable this approach of achieving stretchable films. We show that one can employ high performance donor-acceptor polymer semiconductors that are typically brittle through proper polymer blending to significantly increase ductility to achieve stretchable films. We demonstrate a polymer blend film that can be repeatedly deformed over 65%, while maintaining charge mobility consistently above 0.15 cm2/Vs. During the stretching process we show that the films follow a well-controlled repeated deformation pattern for over 100 stretching cycles.

An investigation of the relationship between innovation and cultural diversity.

PubMed

Kandler, Anne; Laland, Kevin N

2009-08-01

In this paper we apply reaction-diffusion models to explore the relationship between the rate of behavioural innovation and the level of cultural diversity. We investigate how both independent invention and the modification and refinement of established innovations impact on cultural dynamics and diversity. Further, we analyse these relationships in the presence of biases in cultural learning and find that the introduction of new variants typically increases cultural diversity substantially in the short term, but may decrease long-term diversity. Independent invention generally supports higher levels of cultural diversity than refinement. Repeated patterns of innovation through refinement generate characteristic oscillating trends in diversity, with increasing trends towards greater average diversity observed for medium but not low innovation rates. Conformity weakens the relationship between innovation and diversity. The level of cultural diversity, and pattern of temporal dynamics, potentially provide clues as to the underlying process, which can be used to interpret empirical data.

How does pedogenesis drive plant diversity?

USGS Publications Warehouse

Laliberté, Etienne; Grace, James B.; Huston, Michael A.; Lambers, Hans; Teste, François P.; Turner, Benjamin L.; Wardle, David A.

2013-01-01

Some of the most species-rich plant communities occur on ancient, strongly weathered soils, whereas those on recently developed soils tend to be less diverse. Mechanisms underlying this well-known pattern, however, remain unresolved. Here, we present a conceptual model describing alternative mechanisms by which pedogenesis (the process of soil formation) might drive plant diversity. We suggest that long-term soil chronosequences offer great, yet largely untapped, potential as 'natural experiments' to determine edaphic controls over plant diversity. Finally, we discuss how our conceptual model can be evaluated quantitatively using structural equation modeling to advance multivariate theories about the determinants of local plant diversity. This should help us to understand broader-scale diversity patterns, such as the latitudinal gradient of plant diversity.

Ischiovertebral dysplasia: a retrospective analysis of 30 consecutive cases pointing out the specifics and risks of the spine management.

PubMed

Aurégan, Jean-Charles; Odent, Thierry; Coyle, Ryan M; Miladi, Lotfi; Wicart, Philippe; Dubousset, Jean; Le Merrer, Martine; Padovani, Jean-Paul; Glorion, Christophe

2014-04-20

A review of clinical publications, current knowledge, and recent developments regarding the etiology of ischiovertebral dysplasia was combined with a clinical review of the condition. To acquaint orthopedic spine surgeons with identification patterns of ischiovertebral dysplasia in order to provide them with guidelines about spine management and which complications to expect. Ischiovertebral dysplasia is a rare skeletal dysplasia that may appear in a sporadic fashion or be inherited with an autosomal dominant inheritance pattern. It is defined by the association of an ischiopubic ramus hypoplasia and a vertebral dysplasia. It leads to a specific spine deformity whose management and complications should be clarified. Thirty consecutive patients from 0 to 31 years of age with ischiovertebral dysplasia were included from 5 centers specialized in congenital spinal deformities. Frontal and sagittal Cobb angles before treatment, natural history of the curves, therapeutic options, and their complications were systematically analyzed. All the patients had a vertebral dysplasia and 28 of them developed a spinal deformity. This deformity was an extremely severe thoracic kyphoscoliosis in 25 cases. The other deformities were a thoracolumbar scoliosis in 1 case and a thoracolumbar kyphosis in 2 cases. The management of the thoracic kyphoscoliosis was always challenging and complications included death by respiratory failure (3 cases) and neurological impairment (9 cases). Recognizing the occurrence of ischioverterbral dysplasia is very important to allow for dedicated treatment. The authors advocate preoperative distraction and circumferential fusion to prevent progression of the curve and to avoid the potentially fatal sequelae associated with this disorder. 4.

Deformability analysis of sickle blood using ektacytometry.

PubMed

Rabai, Miklos; Detterich, Jon A; Wenby, Rosalinda B; Hernandez, Tatiana M; Toth, Kalman; Meiselman, Herbert J; Wood, John C

2014-01-01

Sickle cell disease (SCD) is characterized by decreased erythrocyte deformability, microvessel occlusion and severe painful infarctions of different organs. Ektacytometry of SCD red blood cells (RBC) is made difficult by the presence of rigid, poorly-deformable irreversibly sickled cells (ISC) that do not align with the fluid shear field and distort the elliptical diffraction pattern seen with normal RBC. In operation, the computer software fits an outline to the diffraction pattern, then reports an elongation index (EI) at each shear stress based on the length and width of the fitted ellipse: EI=(length-width)/(length+width). Using a commercial ektacytometer (LORCA, Mechatronics Instruments, The Netherlands) we have approached the problem of ellipse fitting in two ways: (1) altering the height of the diffraction image on a computer monitor using an aperture within the camera lens; (2) altering the light intensity level (gray level) used by the software to fit the image to an elliptical shape. Neither of these methods affected deformability results (elongation index-shear stress relations) for normal RBC but did markedly affect results for SCD erythrocytes: (1) decreasing image height by 15% and 30% increased EI at moderate to high stresses; (2) progressively increasing the light level increased EI over a wide range of stresses. Fitting data obtained at different image heights using the Lineweaver-Burke routine yielded percentage ISC results in good agreement with microscopic cell counting. We suggest that these two relatively simple approaches allow minimizing artifacts due to the presence of rigid discs or ISC and also suggest the need for additional studies to evaluate the physiological relevance of deformability data obtained via these methods.

Grain rotation and lattice deformation during photoinduced chemical reactions revealed by in situ X-ray nanodiffraction.

PubMed

Huang, Zhifeng; Bartels, Matthias; Xu, Rui; Osterhoff, Markus; Kalbfleisch, Sebastian; Sprung, Michael; Suzuki, Akihiro; Takahashi, Yukio; Blanton, Thomas N; Salditt, Tim; Miao, Jianwei

2015-07-01

In situ X-ray diffraction (XRD) and transmission electron microscopy (TEM) have been used to investigate many physical science phenomena, ranging from phase transitions, chemical reactions and crystal growth to grain boundary dynamics. A major limitation of in situ XRD and TEM is a compromise that has to be made between spatial and temporal resolution. Here, we report the development of in situ X-ray nanodiffraction to measure high-resolution diffraction patterns from single grains with up to 5 ms temporal resolution. We observed, for the first time, grain rotation and lattice deformation in chemical reactions induced by X-ray photons: Br(-) + hv → Br + e(-) and e(-) + Ag(+) → Ag(0). The grain rotation and lattice deformation associated with the chemical reactions were quantified to be as fast as 3.25 rad s(-1) and as large as 0.5 Å, respectively. The ability to measure high-resolution diffraction patterns from individual grains with a temporal resolution of several milliseconds is expected to find broad applications in materials science, physics, chemistry and nanoscience.

New insights into the 2012 Emilia (Italy) seismic sequence through advanced numerical modeling of ground deformation InSAR measurements

NASA Astrophysics Data System (ADS)

Tizzani, P.; Castaldo, R.; Solaro, G.; Pepe, S.; Bonano, M.; Casu, F.; Manunta, M.; Manzo, M.; Pepe, A.; Samsonov, S.; Lanari, R.; Sansosti, E.

2013-05-01

We provide new insights into the two main seismic events that occurred in 2012 in the Emilia region, Italy. We extend the results from previous studies based on analytical inversion modeling of GPS and RADARSAT-1 InSAR measurements by exploiting RADARSAT-2 data. Moreover, we benefit from the available large amount of geological and geophysical information through finite element method (FEM) modeling implemented in a structural-mechanical context to investigate the impact of known buried structures on the modulation of the ground deformation field. We find that the displacement pattern associated with the 20 May event is consistent with the activation of a single fault segment of the inner Ferrara thrust, in good agreement with the analytical solution. In contrast, the interpretation of the 29 May episode requires the activation of three different fault segments and a block roto-translation of the Mirandola anticline. The proposed FEM-based methodology is applicable to other seismic areas where the complexity of buried structures is known and plays a fundamental role in the modulation of the associated surface deformation pattern.

Modeling of karst deformation and analysis of acoustic emission during sinkhole formation

NASA Astrophysics Data System (ADS)

Bakeev, R. A.; Stefanov, Yu. P.; Duchkov, A. A.; Myasnikov, A. V.

2017-12-01

In this paper, the fracture pattern and formation of a sinkhole are estimated depending on the rock properties. The possibility of using geophysical methods for recording and analyzing acoustic emission to monitor and predict the state of the medium is considered. The problem of deformation of the sedimentary cover over the growing karst cavity is solved on the basis of the elastoplastic Drucker-Prager-Nikolaevsky model and the equation of damage accumulation. The specified kinetics of accumulation of damages allows us to describe slow processes of degradation of the strength of the medium under stresses that are low for the development of inelastic deformations. The results are obtained for different values of the strength of karst rock; we show the influence of the kinetic parameters of damage accumulation on the shape of collapse depressions. We also model acoustic emission caused by the material fracture. One can follow different stages of the karst development by looking at patterns of cells which fail at a given time. Our observations show the relation between the intensity of material fracture and the intensity of seismic emission.

Timescale dependent deformation of orogenic belts?

NASA Astrophysics Data System (ADS)

Hoth, S.; Friedrich, A. M.; Vietor, T.; Hoffmann-Rothe, A.; Kukowski, N.; Oncken, O.

2004-12-01

The principle aim to link geodetic, paleoseismologic and geologic estimates of fault slip is to extrapolate the respective rates from one timescale to the other to finally predict the recurrence interval of large earthquakes, which threat human habitats. This approach however, is based on two often implicitly made assumptions: a uniform slip distribution through time and space and no changes of the boundary conditions during the time interval of interest. Both assumptions are often hard to verify. A recent study, which analysed an exceptionally complete record of seismic slip for the Wasatch and related faults (Basin and Range province), ranging from 10 yr to 10 Myr suggests that such a link between geodetic and geologic rates might not exist, i.e., that our records of fault displacement may depend on the timescale over which they were measured. This view derives support from results of scaled 2D sandbox experiments, as well as numerical simulations with distinct elements, both of which investigated the effect of boundary conditions such as flexure, mechanic stratigraphy and erosion on the spatio-temporal distribution of deformation within bivergent wedges. We identified three types of processes based on their distinct spatio-temporal distribution of deformation. First, incremental strain and local strain rates are very short-lived are broadly distributed within the bivergent wedge and no temporal pattern could be established. Second, footwall shortcuts and the re-activation of either internal thrusts or of the retro shear-zone are irregularly distributed in time and are thus not predictable either, but last for a longer time interval. Third, the stepwise initiation and propagation of the deformation front is very regular in time, since it depends on the thickness of the incoming layer and on its internal and basal material properties. We consider the propagation of the deformation front as an internal clock of a thrust belt, which is therefore predictable. A deformation front advance cycle requires the longest timescale. Thus, despite known and constant boundary conditions during the simulations, we found only one regular temporal pattern of deformation in a steady active bivergent-wedge. We therefore propose that the structural inventory of an orogenic belt is hierarchically ordered with respect to accumulated slip, in analogy to the discharge pattern in a drainage network. The deformation front would have the highest, a branching splay the lowest order. Since kinematic boundary conditions control deformation front advance, its timing and the related maximum magnitude of finite strain, i.e. throw on the frontal thrust are predictable. However, the number of controlling factors, such as the degree of strain softening, the orientation of faults or fluid flow and resulting cementation of faults, responsible for the reactivation of faults increases with increasing distance from the deformation front. Since it is rarely possible to determine the complete network of forces within a wedge, the reactivation of lower order structures is not predictable in time and space. Two implications for field studies may emerge: A change of the propagation of deformation can only be determined, if at least two accretion cycles are sampled. The link between geodetic, paleoseismologic and geologic fault slip estimates can only be successfully derived if the position of the investigated fault within the hierarchical order has not changed over the time interval of interest.

Additive Partitioning of Coral Reef Fish Diversity across Hierarchical Spatial Scales throughout the Caribbean

PubMed Central

Francisco-Ramos, Vanessa; Arias-González, Jesús Ernesto

2013-01-01

There is an increasing need to examine regional patterns of diversity in coral-reef systems since their biodiversity is declining globally. In this sense, additive partitioning might be useful since it quantifies the contribution of alpha and beta to total diversity across different scales. We applied this approach using an unbalanced design across four hierarchical scales (80 sites, 22 subregions, six ecoregions, and the Caribbean basin). Reef-fish species were compiled from the Reef Environmental Education Foundation (REEF) database and distributions were confirmed with published data. Permutation tests were used to compare observed values to those expected by chance. The primary objective was to identify patterns of reef-fish diversity across multiple spatial scales under different scenarios, examining factors such as fisheries and demographic connectivity. Total diversity at the Caribbean scale was attributed to β-diversity (nearly 62% of the species), with the highest β-diversity at the site scale. α¯-diversity was higher than expected by chance in all scenarios and at all studied scales. This suggests that fish assemblages are more homogenous than expected, particularly at the ecoregion scale. Within each ecoregion, diversity was mainly attributed to alpha, except for the Southern ecoregion where there was a greater difference in species among sites. β-components were lower than expected in all ecoregions, indicating that fishes within each ecoregion are a subsample of the same species pool. The scenario involving the effects of fisheries showed a shift in dominance for β-diversity from regions to subregions, with no major changes to the diversity patterns. In contrast, demographic connectivity partially explained the diversity pattern. β-components were low within connectivity regions and higher than expected by chance when comparing between them. Our results highlight the importance of ecoregions as a spatial scale to conserve local and regional coral reef-fish diversity. PMID:24205311

Mechanical Deformation Mechanisms and Properties of Prion Fibrils Probed by Atomistic Simulations

NASA Astrophysics Data System (ADS)

Choi, Bumjoon; Kim, Taehee; Ahn, Eue Soo; Lee, Sang Woo; Eom, Kilho

2017-03-01

Prion fibrils, which are a hallmark for neurodegenerative diseases, have recently been found to exhibit the structural diversity that governs disease pathology. Despite our recent finding concerning the role of the disease-specific structure of prion fibrils in determining their elastic properties, the mechanical deformation mechanisms and fracture properties of prion fibrils depending on their structures have not been fully characterized. In this work, we have studied the tensile deformation mechanisms of prion and non-prion amyloid fibrils by using steered molecular dynamics simulations. Our simulation results show that the elastic modulus of prion fibril, which is formed based on left-handed β-helical structure, is larger than that of non-prion fibril constructed based on right-handed β-helix. However, the mechanical toughness of prion fibril is found to be less than that of non-prion fibril, which indicates that infectious prion fibril is more fragile than non-infectious (non-prion) fibril. Our study sheds light on the role of the helical structure of amyloid fibrils, which is related to prion infectivity, in determining their mechanical deformation mechanisms and properties.

DeepID-Net: Deformable Deep Convolutional Neural Networks for Object Detection.

PubMed

Ouyang, Wanli; Zeng, Xingyu; Wang, Xiaogang; Qiu, Shi; Luo, Ping; Tian, Yonglong; Li, Hongsheng; Yang, Shuo; Wang, Zhe; Li, Hongyang; Loy, Chen Change; Wang, Kun; Yan, Junjie; Tang, Xiaoou

2016-07-07

In this paper, we propose deformable deep convolutional neural networks for generic object detection. This new deep learning object detection framework has innovations in multiple aspects. In the proposed new deep architecture, a new deformation constrained pooling (def-pooling) layer models the deformation of object parts with geometric constraint and penalty. A new pre-training strategy is proposed to learn feature representations more suitable for the object detection task and with good generalization capability. By changing the net structures, training strategies, adding and removing some key components in the detection pipeline, a set of models with large diversity are obtained, which significantly improves the effectiveness of model averaging. The proposed approach improves the mean averaged precision obtained by RCNN [16], which was the state-of-the-art, from 31% to 50.3% on the ILSVRC2014 detection test set. It also outperforms the winner of ILSVRC2014, GoogLeNet, by 6.1%. Detailed component-wise analysis is also provided through extensive experimental evaluation, which provides a global view for people to understand the deep learning object detection pipeline.

Measurement of strain distribution in cortical bone around miniscrew implants used for orthodontic anchorage using digital speckle pattern interferometry

NASA Astrophysics Data System (ADS)

Kumar, Manoj; Agarwal, Rupali; Bhutani, Ravi; Shakher, Chandra

2016-05-01

An application of digital speckle pattern interferometry (DSPI) for the measurement of deformations and strain-field distributions developed in cortical bone around orthodontic miniscrew implants inserted into the human maxilla is presented. The purpose of this study is to measure and compare the strain distribution in cortical bone/miniscrew interface of human maxilla around miniscrew implants of different diameters, different implant lengths, and implants of different commercially available companies. The technique is also used to measure tilt/rotation of canine caused due to the application of retraction springs. The proposed technique has high sensitivity and enables the observation of deformation/strain distribution. In DSPI, two specklegrams are recorded corresponding to pre- and postloading of the retraction spring. The DSPI fringe pattern is observed by subtracting these two specklegrams. Optical phase was extracted using Riesz transform and the monogenic signal from a single DSPI fringe pattern. The obtained phase is used to calculate the parameters of interest such as displacement/deformation and strain/stress. The experiment was conducted on a dry human skull fulfilling the criteria of intact dental arches and all teeth present. Eight different miniscrew implants were loaded with an insertion angulation of 45 deg in the inter-radicular region of the maxillary second premolar and molar region. The loading of miniscrew implants was done with force level (150 gf) by nickel-titanium closed-coil springs (9 mm). The obtained results from DSPI reveal that implant diameter and implant length affect the displacement and strain distribution in cortical bone layer surrounding the miniscrew implant.

Relation between alternating open/closed-conduit conditions and deformation patterns: An example from the Somma-Vesuvius volcano (southern Italy)

NASA Astrophysics Data System (ADS)

Tramparulo, F. D. A.; Vitale, S.; Isaia, R.; Tadini, A.; Bisson, M.; Prinzi, E. P.

2018-07-01

We present the results of a meso-scale systematic structural analysis of fractures, faults and dykes exposed at the Somma-Vesuvius volcano (southern Italy). Observed fractures include: (i) radial and tangential (with respect the caldera axis), sub-metric to metric joints associated with the edifice load and volcano-tectonic activity (i.e. inflation, deflation and caldera collapse stages) and (ii) decameter-scale fractures related to volcano flank instabilities. For the Somma-Vesuvius volcano, preexisting radial joints were commonly reactivated as transfer faults during the caldera formation, allowing different blocks to move toward the center of the collapsing area. Dykes occur with different geometries, including en-echelon structures bounding structural depressions. The orientation analysis of all structures indicates that they are preferentially oriented. Furthermore, we provide a morphological lineament analysis using high-resolution Digital Terrain Models of Somma-Vesuvius. Azimuth and spatial distribution of dykes and morphological lineaments were analyzed for comparison with the old Somma Crater and Gran Cono axes, respectively. Results highlight the overprinting of radial and clustered strain patterns recorded in different volcano-tectonic evolution stages. We suggest a possible deformation evolution model in which structures develop along either radial or preferential trends, highlighting different volcanic conditions: (i) where radial patterns occur, the structures developed during volcanic inflation cycles with a closed magmatic conduit condition whereas (ii) clustered patterns are probably associated with a regional strain field that overcomes the local deformation field, a situation typical in the case of open-conduit activity.

Performance through Deformation and Instability

NASA Astrophysics Data System (ADS)

Bertoldi, Katia

2015-03-01

Materials capable of undergoing large deformations like elastomers and gels are ubiquitous in daily life and nature. An exciting field of engineering is emerging that uses these compliant materials to design active devices, such as actuators, adaptive optical systems and self-regulating fluidics. Compliant structures may significantly change their architecture in response to diverse stimuli. When excessive deformation is applied, they may eventually become unstable. Traditionally, mechanical instabilities have been viewed as an inconvenience, with research focusing on how to avoid them. Here, I will demonstrate that these instabilities can be exploited to design materials with novel, switchable functionalities. The abrupt changes introduced into the architecture of soft materials by instabilities will be used to change their shape in a sudden, but controlled manner. Possible and exciting applications include materials with unusual properties such negative Poisson's ratio, phononic crystals with tunable low-frequency acoustic band gaps and reversible encapsulation systems.

Application of Time Series Insar Technique for Deformation Monitoring of Large-Scale Landslides in Mountainous Areas of Western China

NASA Astrophysics Data System (ADS)

Qu, T.; Lu, P.; Liu, C.; Wan, H.

2016-06-01

Western China is very susceptible to landslide hazards. As a result, landslide detection and early warning are of great importance. This work employs the SBAS (Small Baseline Subset) InSAR Technique for detection and monitoring of large-scale landslides that occurred in Li County, Sichuan Province, Western China. The time series INSAR is performed using descending scenes acquired from TerraSAR-X StripMap mode since 2014 to get the spatial distribution of surface displacements of this giant landslide. The time series results identify the distinct deformation zone on the landslide body with a rate of up to 150mm/yr. The deformation acquired by SBAS technique is validated by inclinometers from diverse boreholes of in-situ monitoring. The integration of InSAR time series displacements and ground-based monitoring data helps to provide reliable data support for the forecasting and monitoring of largescale landslide.

Taxonomic distinctness and richness of helminth parasite assemblages of freshwater fishes in Mexican hydrological basins.

PubMed

Quiroz-Martínez, Benjamín; Salgado-Maldonado, Guillermo

2013-01-01

In this paper, we analyse the distributional patterns of adult helminth parasites of freshwater fishes with respect to the main hydrological basins of Mexico. We use the taxonomic distinctness and the variation in taxonomic distinctness to explore patterns of parasite diversity and how these patterns change between zoogeographical regions. We address questions about the factors that determine the variation of observed diversity of helminths between basins. We also investigate patterns of richness, taxonomic distinctness and distance decay of similarity amongst basins. Our analyses suggest that the evolution of the fauna of helminth parasites in Mexico is mostly dominated by independent host colonization events and that intra--host speciation could be a minor factor explaining the origin of this diversity. This paper points out a clear separation between the helminth faunas of northern--nearctic and southern--neotropical components in Mexican continental waters, suggesting the availability of two distinct taxonomic pools of parasites in Mexican drainage basins. Data identifies Mexican drainage basins as unities inhabited by freshwater fishes, hosting a mixture of neotropical and nearctic species, in addition, data confirms neotropical and neartic basins/helminth faunas. The neotropical basins of Mexico are host to a richest and more diversified helminth fauna, including more families, genera and species, compared to the less rich and less diverse helminth fauna in the nearctic basins. The present analysis confirms distance--decay as one of the important factors contributing to the patterns of diversity observed. The hypothesis that helminth diversity could be explained by the ichthyological diversity of the basin received no support from present analysis.

Taxonomic Distinctness and Richness of Helminth Parasite Assemblages of Freshwater Fishes in Mexican Hydrological Basins

PubMed Central

Quiroz-Martínez, Benjamín; Salgado-Maldonado, Guillermo

2013-01-01

In this paper, we analyse the distributional patterns of adult helminth parasites of freshwater fishes with respect to the main hydrological basins of Mexico. We use the taxonomic distinctness and the variation in taxonomic distinctness to explore patterns of parasite diversity and how these patterns change between zoogeographical regions. We address questions about the factors that determine the variation of observed diversity of helminths between basins. We also investigate patterns of richness, taxonomic distinctness and distance decay of similarity amongst basins. Our analyses suggest that the evolution of the fauna of helminth parasites in Mexico is mostly dominated by independent host colonization events and that intra - host speciation could be a minor factor explaining the origin of this diversity. This paper points out a clear separation between the helminth faunas of northern - nearctic and southern - neotropical components in Mexican continental waters, suggesting the availability of two distinct taxonomic pools of parasites in Mexican drainage basins. Data identifies Mexican drainage basins as unities inhabited by freshwater fishes, hosting a mixture of neotropical and nearctic species, in addition, data confirms neotropical and neartic basins/helminth faunas. The neotropical basins of Mexico are host to a richest and more diversified helminth fauna, including more families, genera and species, compared to the less rich and less diverse helminth fauna in the nearctic basins. The present analysis confirms distance - decay as one of the important factors contributing to the patterns of diversity observed. The hypothesis that helminth diversity could be explained by the ichthyological diversity of the basin received no support from present analysis. PMID:24086342

Introduction of a deformable x-ray CT polymer gel dosimetry system

NASA Astrophysics Data System (ADS)

Maynard, E.; Heath, E.; Hilts, M.; Jirasek, A.

2018-04-01

This study introduces the first 3D deformable dosimetry system based on x-ray computed tomography (CT) polymer gel dosimetry and establishes the setup reproducibility, deformation characteristics and dose response of the system. A N-isopropylacrylamide (NIPAM)-based gel formulation optimized for x-ray CT gel dosimetry was used, with a latex balloon serving as the deformable container and low-density polyethylene and polyvinyl alcohol providing additional oxygen barrier. Deformable gels were irradiated with a 6 MV calibration pattern to determine dosimetric response and a dosimetrically uniform plan to determine the spatial uniformity of the response. Wax beads were added to each gel as fiducial markers to track the deformation and setup of the gel dosimeters. From positions of the beads on CT images the setup reproducibility and the limits and reproducibility of gel deformation were determined. Comparison of gel measurements with Monte Carlo dose calculations found excellent dosimetric accuracy, comparable to that of an established non-deformable dosimetry system, with a mean dose discrepancy of 1.5% in the low-dose gradient region and a gamma pass rate of 97.9% using a 3%/3 mm criterion. The deformable dosimeter also showed good overall spatial dose uniformity throughout the dosimeter with some discrepancies within 20 mm of the edge of the container. Tracking of the beads within the dosimeter found that sub-millimetre setup accuracy is achievable with this system. The dosimeter was able to deform and relax when externally compressed by up to 30 mm without sustaining any permanent damage. Internal deformations in 3D produced average marker movements of up to 12 mm along the direction of compression. These deformations were also shown to be reproducible over 100 consecutive deformations. This work has established several important characteristics of a new deformable dosimetry system which shows promise for future clinical applications, including the validation of deformable dose accumulation algorithms.

Urbanization-induced habitat fragmentation erodes multiple components of temporal diversity in a Southern California native bee assemblage

PubMed Central

Ascher, John S.; Holway, David A.

2017-01-01

Despite a large number of ecological studies that document diversity loss resulting from anthropogenic disturbance, surprisingly few consider how disturbance affects temporal patterns of diversity that result from seasonal turnover of species. Temporal dynamics can play an important role in the structure and function of biological assemblages. Here, we investigate the temporal diversity patterns of bee faunas in Southern California coastal sage scrub ecosystems that have been extensively fragmented by urbanization. Using a two-year dataset of 235 bee species (n = 12,036 specimens), we compared 1-ha plots in scrub fragments and scrub reserves with respect to three components of temporal diversity: overall plot-level diversity pooled over time (temporal gamma diversity), diversity at discrete points in time (temporal alpha diversity), and seasonal turnover in assemblage composition (temporal beta diversity). Compared to reserves, fragments harbored bee assemblages with lower species richness and assemblage evenness both when summed across temporal samples (i.e., lower temporal gamma diversity) and at single points in time (i.e., lower temporal alpha diversity). Bee assemblages in fragments also exhibited reduced seasonal turnover (i.e., lower temporal beta diversity). While fragments and reserves did not differ in overall bee abundance, bee abundance in fragments peaked later in the season compared to that in reserves. Our results argue for an increased awareness of temporal diversity patterns, as information about the distinct components of temporal diversity is essential both for characterizing the assemblage dynamics of seasonal organisms and for identifying potential impacts of anthropogenic disturbance on ecosystem function through its effects on assemblage dynamics. PMID:28854229

Genomes of Salmonella with diverse patterns of antibiotic resistance (AR) revealed the dynamics of AR gene organization and detected resistance gene families found in Salmonella

USDA-ARS?s Scientific Manuscript database

We produced and assembled high quality draft genomes (~100X coverage) for 305 Salmonella from a diverse a group of over 100 serovars and diverse sources. Of these isolates, 119 were selected to capture a wide variety of different AR patterns. In our subsequent analyses we included 285 additional pub...

Different Planctomycetes diversity patterns in latitudinal surface seawater of the open sea and in sediment.

PubMed

Shu, Qinglong; Jiao, Nianzhi

2008-04-01

The 16S rRNA gene approach was applied to investigate the diversity of Planctomycetes in latitudinal surface seawater of the Western Pacific Ocean. The results revealed that the Pirellula-Rhodopirellula-Blastopirellula clade dominated the Planctomycetes community at all surface seawater sites while the minority genera Gemmata and Planctomyces were only found at sites H5 and H2 respectively. Although the clone frequency of the PRB clade seemed stable (between 83.3% and 94.1%) for all surface seawater sites, the retrieved Pirellula-Rhodopirellula-Blastopirellula clade presented unexpected diversity. Interestingly, low latitude seawater appeared to have higher diversity than mid-latitudes. integral-LIBSHUFF software analysis revealed significantly different diversity patterns between in latitudinal surface seawater and in the sediment of South China Sea station M2896. Our data suggested that different hydrological and geographic features contributed to the shift of Planctomycetes diversity in marine environments. This is, to our knowledge, the first systematic assessment of Planctomycetes in latitudinal surface seawater of the open sea and the first comparison of diversity pattern between surface seawater and sediments and has broadened our understanding of Planctomycetes diversity in marine environments.

Multi-stability and variable stiffness of cellular solids designed based on origami patterns

NASA Astrophysics Data System (ADS)

Sengupta, Sattam; Li, Suyi

2017-04-01

The application of origami-inspired designs to engineered structures and materials has been a subject of much research efforts. These structures and materials, whose mechanical properties are directly related to the geometry of folding, are capable of achieving a host of unique adaptive functions. In this study, we investigate a three-dimensional multistability and variable stiffness function of a cellular solid based on the Miura-Ori folding pattern. The unit cell of such a solid, consisting of two stacked Miura-Ori sheets, can be elastically bistable due to the nonlinear relationship between rigid-folding deformation and crease material bending. Such a bistability possesses an unorthodox property: the critical, unstable configuration lies on the same side of two stable ones, so that two different force-deformation curves co-exist within the same range of deformation. By exploiting such unique stability properties, we can achieve a programmable stiffness change between the two elastically stable states, and the stiffness differences can be prescribed by tailoring the crease patterns of the cell. This paper presents a comprehensive parametric study revealing the correlations between such variable stiffness and various design parameters. The unique properties stemming from the bistability and design of such a unit cell can be advanced further by assembling them into a solid which can be capable of shape morphing and programmable mechanical properties.

A MULTI-LOCUS, MULTI-TAXA PHYLOGEOGRAPHICAL ANALYSIS OF GENETIC DIVERSITY

EPA Science Inventory

In addition to measuring spatial patterns of genetic diversity, population genetic measures of biological resources should include temporal data that indicate whether the observed patterns are the result of historical or contemporary processes. In general, genetic measures focus...

Constraints on Neogene deformation in the southern Terror Rift from calcite twinning analyses of veins within the ANDRILL MIS core, Victoria Land Basin, Antarctica

NASA Astrophysics Data System (ADS)

Paulsen, T. S.; Demosthenous, C.; Wilson, T. J.; Millan, C.

2009-12-01

The ANDRILL MIS (McMurdo Ice Shelf) Drilling Project obtained over 1200 meters of Neogene sedimentary and volcanic rocks in 2006/2007. Systematic fracture logging of the AND-1B core identified 1,475 natural fractures, i.e. pre-existing fractures in the rock intersected by coring. The most abundant natural fractures are normal faults and calcite veins; reverse faults, brecciated zones, and sedimentary intrusions are also present. In order to better understand Neogene deformation patterns within the southern Terror Rift, we have been conducting strain analyses on mechanically twinned calcite within healed fractures in the drill core. Twinning strains using all of the data from each sample studied to date range from 2% to 10%. The cleaned data (20% of the largest magnitude deviations removed) typically show ≤30% negative expected values, consistent with a single deformation episode or multiple ~coaxial deformation episodes. The majority of the samples record horizontal extension, similar to strain patterns expected in a normal fault regime and/or vertical sedimentary compaction in a continental rift system. The morphology, width, and intensity of twins in the samples suggest that twinning typically occurred at temperatures <170° C. Twinning intensities suggest differential stress magnitudes that caused the twinning ranged from 216 to 295 MPa.

Bathymetric patterns in standing stock and diversity of deep-sea nematodes at the long-term ecological research observatory HAUSGARTEN (Fram Strait)

NASA Astrophysics Data System (ADS)

Grzelak, Katarzyna; Kotwicki, Lech; Hasemann, Christiane; Soltwedel, Thomas

2017-08-01

Bathymetric patterns in standing stocks and diversity are a major topic of investigation in deep-sea biology. From the literature, responses of metazoan meiofauna and nematodes to bathymetric gradients are well studied, with a general decrease in biomass and abundance with increasing water depth, while bathymetric diversity gradients often, although it is not a rule, show a unimodal pattern. Spatial distribution patterns of nematode communities along bathymetric gradients are coupled with surface-water processes and interacting physical and biological factors within the benthic system. We studied the nematode communities at the Long-Term Ecological Research (LTER) observatory HAUSGARTEN, located in the Fram Strait at the Marginal Ice Zone, with respect to their standing stocks as well as structural and functional diversity. We evaluated whether nematode density, biomass and diversity indices, such as H0, Hinf, EG(50), Θ- 1, are linked with environmental conditions along a bathymetric transect spanning from 1200 m to 5500 m water depth. Nematode abundance, biomass and diversity, as well as food availability from phytodetritus sedimentation (indicated by chloroplastic pigments in the sediments), were higher at the stations located at upper bathyal depths (1200-2000 m) and tended to decrease with increasing water depth. A faunal shift was found below 3500 m water depth, where genus composition and trophic structure changed significantly and structural diversity indices markedly decreased. A strong dominance of very few genera and its high turnover particularly at the abyssal stations (4000-5500 m) suggests that environmental conditions were rather unfavorable for most genera. Despite the high concentrations of sediment-bound chloroplastic pigments and elevated standing stocks found at the deepest station (5500 m), nematode genus diversity remained the lowest compared to all other stations. This study provides a further insight into the knowledge of deep-sea nematodes, their diversity patterns and a deeper understanding of the environmental factors shaping nematodes communities at bathyal and abyssal depths.

Diversity patterns of microbial eukaryotes mirror those of bacteria in Antarctic cryoconite holes.

PubMed

Sommers, Pacifica; Darcy, John L; Gendron, Eli M S; Stanish, Lee F; Bagshaw, Elizabeth A; Porazinska, Dorota L; Schmidt, Steven K

2018-01-01

Ice-lidded cryoconite holes on glaciers in the Taylor Valley, Antarctica, provide a unique system of natural mesocosms for studying community structure and assembly. We used high-throughput DNA sequencing to characterize both microbial eukaryotic communities and bacterial communities within cryoconite holes across three glaciers to study similarities in their spatial patterns. We expected that the alpha (phylogenetic diversity) and beta (pairwise community dissimilarity) diversity patterns of eukaryotes in cryoconite holes would be related to those of bacteria, and that they would be related to the biogeochemical gradient within the Taylor Valley. We found that eukaryotic alpha and beta diversity were strongly related to those of bacteria across scales ranging from 140 m to 41 km apart. Alpha diversity of both was significantly related to position in the valley and surface area of the cryoconite hole, with pH also significantly correlated with the eukaryotic diversity. Beta diversity for both bacteria and eukaryotes was significantly related to position in the valley, with bacterial beta diversity also related to nitrate. These results are consistent with transport of sediments onto glaciers occurring primarily at local scales relative to the size of the valley, thus creating feedbacks in local chemistry and diversity. © FEMS 2017. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Biogeographic patterns in below-ground diversity in New York City's Central Park are similar to those observed globally.

PubMed

Ramirez, Kelly S; Leff, Jonathan W; Barberán, Albert; Bates, Scott Thomas; Betley, Jason; Crowther, Thomas W; Kelly, Eugene F; Oldfield, Emily E; Shaw, E Ashley; Steenbock, Christopher; Bradford, Mark A; Wall, Diana H; Fierer, Noah

2014-11-22

Soil biota play key roles in the functioning of terrestrial ecosystems, however, compared to our knowledge of above-ground plant and animal diversity, the biodiversity found in soils remains largely uncharacterized. Here, we present an assessment of soil biodiversity and biogeographic patterns across Central Park in New York City that spanned all three domains of life, demonstrating that even an urban, managed system harbours large amounts of undescribed soil biodiversity. Despite high variability across the Park, below-ground diversity patterns were predictable based on soil characteristics, with prokaryotic and eukaryotic communities exhibiting overlapping biogeographic patterns. Further, Central Park soils harboured nearly as many distinct soil microbial phylotypes and types of soil communities as we found in biomes across the globe (including arctic, tropical and desert soils). This integrated cross-domain investigation highlights that the amount and patterning of novel and uncharacterized diversity at a single urban location matches that observed across natural ecosystems spanning multiple biomes and continents. © 2014 The Author(s) Published by the Royal Society. All rights reserved.

Genomic determinants of epidermal appendage patterning and structure in domestic birds.

PubMed

Boer, Elena F; Van Hollebeke, Hannah F; Shapiro, Michael D

2017-09-15

Variation in regional identity, patterning, and structure of epidermal appendages contributes to skin diversity among many vertebrate groups, and is perhaps most striking in birds. In pioneering work on epidermal appendage patterning, John Saunders and his contemporaries took advantage of epidermal appendage diversity within and among domestic chicken breeds to establish the importance of mesoderm-ectoderm signaling in determining skin patterning. Diversity in chickens and other domestic birds, including pigeons, is driving a new wave of research to dissect the molecular genetic basis of epidermal appendage patterning. Domestic birds are not only outstanding models for embryonic manipulations, as Saunders recognized, but they are also ideal genetic models for discovering the specific genes that control normal development and the mutations that contribute to skin diversity. Here, we review recent genetic and genomic approaches to uncover the basis of epidermal macropatterning, micropatterning, and structural variation. We also present new results that confirm expression changes in two limb identity genes in feather-footed pigeons, a case of variation in appendage structure and identity. Copyright © 2017 The Authors. Published by Elsevier Inc. All rights reserved.

Plastic deformation at surface during unlubricated sliding

NASA Technical Reports Server (NTRS)

Yamamoto, T.; Buckley, D. H.

1982-01-01

The plastic deformation and wear of 304 stainless-steel surface slid against an aluminum oxide rider were observed by using a scanning electron microscope and an optical microscope. Experiments were conducted in a vacuum of 0.000001 Pa and in an environment of 0.0005 Pa chlorine gas at 25 C. The load was 500 grams and the sliding velocity was 0.5 centimeter per second. The deformed surface layer which accumulates and develops successively is left behind the rider, and step-shaped protuberances are developed even after single pass sliding under both environmental conditions. A fully developed surface layer is gradually torn off leaving a characteristic pattern. These observations result from both adhesion and an adhesive wear mechanism.

Deformation of a bismuth ferrite nanocrystal imaged by coherent X-ray diffraction

NASA Astrophysics Data System (ADS)

Newton, Marcus C.; Pietraszewski, Adam; Kenny, Anthony; Wagner, Ulrich; Rau, Christoph

2017-06-01

Perovskite materials that contain transition metal-oxides often exhibit multifunctional properties with considerable utility in a device setting. BiFeO3 is a multiferroic perovskite material that exhibits room temperature anti-ferromagnetic and ferroelectric ordering. Optical excitation of BiFeO3 crystals results in an elastic structural deformation of the lattice with a fast response on the pico-second time scale. Here we report on dynamic optical excitation coupled with Bragg coherent X-ray diffraction measurements to investigate the structural properties of BiFeO3 nanoscale crystals. A continuous distortion of the diffraction speckle pattern was observed with increasing illumination. This was attributed to strain resulting from photo-induced lattice deformation.

Measuring diversity of music tastes in online musical society

NASA Astrophysics Data System (ADS)

Li, Hao; Han, Xiao-Pu; Lü, Linyuan; Pan, Zhigeng

The diversity of people’s musical tastes is one of the significant parts which helps people to better understand the behavior trends and cultural preferences of people. In this paper, based on Hill-type true diversity, we propose an improved diversity metric that fairly captures the diversity of musical tastes. This diversity efficiently considers all the three aspects of diversity definitions: variety, balance, and disparity, and keeps higher discriminatory power. Using this diversity metric, one can analyze users’ music tastes on Xiami.com, one of the largest social music media in China; we explore the association between the diversity and various variables which represent users’ personal traits, as well as the difference between different genre levels and map the cultural pattern of difference genres. Our findings dig out many efficient factors that deeply impact users’ music tastes, and provide the global pattern of musical cultural structure on the Chinese online music society.

Imprinting bulk amorphous alloy at room temperature

DOE PAGES

Kim, Song-Yi; Park, Eun-Soo; Ott, Ryan T.; ...

2015-11-13

We present investigations on the plastic deformation behavior of a brittle bulk amorphous alloy by simple uniaxial compressive loading at room temperature. A patterning is possible by cold-plastic forming of the typically brittle Hf-based bulk amorphous alloy through controlling homogenous flow without the need for thermal energy or shaping at elevated temperatures. The experimental evidence suggests that there is an inconsistency between macroscopic plasticity and deformability of an amorphous alloy. Moreover, imprinting of specific geometrical features on Cu foil and Zr-based metallic glass is represented by using the patterned bulk amorphous alloy as a die. These results demonstrate the abilitymore » of amorphous alloys or metallic glasses to precisely replicate patterning features onto both conventional metals and the other amorphous alloys. In conclusion, our work presents an avenue for avoiding the embrittlement of amorphous alloys associated with thermoplastic forming and yields new insight the forming application of bulk amorphous alloys at room temperature without using heat treatment.« less

pp iii Morphological response to Quaternary deformation at an intermontane basin piedmont, the northern Tien Shan, Kyrghyzstan

NASA Astrophysics Data System (ADS)

Bowman, Dan; Korjenkov, Andrey; Porat, Naomi; Czassny, Birka

2004-11-01

The Tien Shan is a most active intracontinental mountain-building range with abundant Quaternary fault-related folding. In order to improve our understanding of Quaternary intermontane basin deformation, we investigated the intermontane Issyk-Kul Lake area, an anticline that was up-warped through the piedmont cover, causing partitioning of the alluvial fan veneer. To follow the morphological scenario during the warping process, we relied on surface-exposed and trenched structures and on alluvial fans and bajadas as reference surfaces. We used air photos and satellite images to analyze the spatial-temporal morphological record and determined the age of near surface sediments by luminescence dating. We demonstrate that the up-warped Ak-Teke hills are a thrust-generated subdued anticline with strong morphological asymmetry which results from the coupling of the competing processes of up-warp and erosional feedback. The active creeks across the up-warped anticline indicate that the antecedent drainage system kept pace with the rate of uplift. The rivers which once sourced the piedmont, like the Toru-Aygyr, Kultor and the Dyuresu, became deeply entrenched and gradually transformed the study area into an abandoned morphological surface. The up-warp caused local lateral drainage diversion in front of the northern backlimb and triggered the formation of a dendritic drainage pattern upfan. Luminescence dating suggest that the period of up-warp and antecedent entrenchment started after 157 ka. The morphologically mature study area demonstrates the response of fluvial systems to growing folds on piedmont areas, induced by a propagating frontal fold at a thrust belt edge, following shortening.

Testing the effect of the rock record on diversity: a multidisciplinary approach to elucidating the generic richness of sauropodomorph dinosaurs through time.

PubMed

Mannion, Philip D; Upchurch, Paul; Carrano, Matthew T; Barrett, Paul M

2011-02-01

The accurate reconstruction of palaeobiodiversity patterns is central to a detailed understanding of the macroevolutionary history of a group of organisms. However, there is increasing evidence that diversity patterns observed directly from the fossil record are strongly influenced by fluctuations in the quality of our sampling of the rock record; thus, any patterns we see may reflect sampling biases, rather than genuine biological signals. Previous dinosaur diversity studies have suggested that fluctuations in sauropodomorph palaeobiodiversity reflect genuine biological signals, in comparison to theropods and ornithischians whose diversity seems to be largely controlled by the rock record. Most previous diversity analyses that have attempted to take into account the effects of sampling biases have used only a single method or proxy: here we use a number of techniques in order to elucidate diversity. A global database of all known sauropodomorph body fossil occurrences (2024) was constructed. A taxic diversity curve for all valid sauropodomorph genera was extracted from this database and compared statistically with several sampling proxies (rock outcrop area and dinosaur-bearing formations and collections), each of which captures a different aspect of fossil record sampling. Phylogenetic diversity estimates, residuals and sample-based rarefaction (including the first attempt to capture 'cryptic' diversity in dinosaurs) were implemented to investigate further the effects of sampling. After 'removal' of biases, sauropodomorph diversity appears to be genuinely high in the Norian, Pliensbachian-Toarcian, Bathonian-Callovian and Kimmeridgian-Tithonian (with a small peak in the Aptian), whereas low diversity levels are recorded for the Oxfordian and Berriasian-Barremian, with the Jurassic/Cretaceous boundary seemingly representing a real diversity trough. Observed diversity in the remaining Triassic-Jurassic stages appears to be largely driven by sampling effort. Late Cretaceous diversity is difficult to elucidate and it is possible that this interval remains relatively under-sampled. Despite its distortion by sampling biases, much of sauropodomorph palaeobiodiversity can be interpreted as a reflection of genuine biological signals, and fluctuations in sea level may account for some of these diversity patterns. © 2010 The Authors. Biological Reviews © 2010 Cambridge Philosophical Society.

Postseismic deformation following the June 2000 earthquake sequence in the south Iceland seismic zone

USGS Publications Warehouse

Arnadottir, T.; Jonsson, Sigurjon; Pollitz, F.F.; Jiang, W.; Feigl, K.L.

2005-01-01

We observe postseismic deformation on two spatiotemporal scales following Mw = 6.5 earthquakes in the south Iceland seismic zone on 17 and 21 June 2000. We see a rapidly decaying deformation transient lasting no more than 2 months and extending about 5 km away from the two main shock ruptures. This local, month-scale transient is captured by several radar interferograms and is also observed at a few campaign GPS sites located near the faults. A slower transient with a characteristic timescale of about a year is detected only by GPS measurements. The month-scale deformation pattern has been explained by poroelastic rebound due to postearthquake pore pressure changes. In contrast, the year-scale deformation can be explained by either afterslip at 8-14 km depth or viscoelastic relaxation of the lower crust and upper mantle in response to the coseismic stress changes. The optimal viscoelastic models have lower crustal viscosities of 0.5-1 ?? 1019 Pa s and upper mantle viscosity of ???3 ?? 1018 Pa s. Because of the limitations of our GPS campaign data, we consider both afterslip and viscoelastic relaxation as plausible mechanisms explaining the deformation field. Both types of postseismic deformation models suggest that the areas of large coseismic stress increase east of the 17 June and west of the 21 June ruptures continue to be loaded by the postseismic deformation. Copyright 2005 by the American Geophysical Union.

Volcanic deformation of Atosanupuri volcanic complex in the Kussharo caldera, Japan, from 1993 to 2016 revealed by JERS-1, ALOS, and ALOS-2 radar interferometry

NASA Astrophysics Data System (ADS)

Fujiwara, Satoshi; Murakami, Makoto; Nishimura, Takuya; Tobita, Mikio; Yarai, Hiroshi; Kobayashi, Tomokazu

2017-06-01

A series of uplifts and subsidences of a volcanic complex in the Kussharo caldera in eastern Hokkaido (Japan) has been revealed by interferometric analysis using archived satellite synthetic aperture radar data. A time series of interferograms from 1993 to 1998 showed the temporal evolution of a ground deformation process. The horizontal dimension of the deformation field was about 10 km in diameter, and the maximum amplitude of the deformation was >20 cm. Uplift started in 1994, and concurrent earthquake swarm activity was observed around the uplift area; however, no other phenomena were observed during this period. A subsidence process then followed, with the shape of the deformation forming a mirror image of the uplift. Model simulations suggest deformation was caused by a source at the depth of about 6 km and that the position of the source remained static throughout the episode. Subsidence of the volcanic complex was also observed by another satellite from 2007 to 2010, and likely continued for more than 10 years. In addition to the main uplift-subsidence sequence, small deformation patterns with short spatial wavelengths were observed at the center of the deforming area. Data from three satellites recorded small-scale subsidence of the Atosanupuri and Rishiri lava domes at a constant rate of approx. 1 cm/year from 1993 to 2016.[Figure not available: see fulltext.

Habitat history improves prediction of biodiversity in rainforest fauna

PubMed Central

Graham, Catherine H.; Moritz, Craig; Williams, Stephen E.

2006-01-01

Patterns of biological diversity should be interpreted in light of both contemporary and historical influences; however, to date, most attempts to explain diversity patterns have largely ignored history or have been unable to quantify the influence of historical processes. The historical effects on patterns of diversity have been hypothesized to be most important for taxonomic groups with poor dispersal abilities. We quantified the relative stability of rainforests over the late Quaternary period by modeling rainforest expansion and contraction in 21 biogeographic subregions in northeast Australia across four time periods. We demonstrate that historical habitat stability can be as important, and in endemic low-dispersal taxa even more important, than current habitat area in explaining spatial patterns of species richness. In contrast, patterns of endemic species richness for taxa with high dispersal capacity are best predicted by using current environmental parameters. We also show that contemporary patterns of species turnover across the region are best explained by historical patterns of habitat connectivity. These results clearly demonstrate that spatially explicit analyses of the historical processes of persistence and colonization are both effective and necessary for understanding observed patterns of biodiversity. PMID:16407139

Complex Anisotropic Structure of the Mantle Wedge Beneath Kamchatka Volcanoes

NASA Astrophysics Data System (ADS)

Levin, V.; Park, J.; Gordeev, E.; Droznin, D.

2002-12-01

A wedge of mantle material above the subducting lithospheric plate at a convergent margin is among the most dynamic environments of the Earth's interior. Deformation and transport of solid and volatile phases within this region control the fundamental process of elemental exchange between the surficial layers and the interior of the planet. A helpful property in the study of material deformation and transport within the upper mantle is seismic anisotropy, which may reflect both microscopic effects of preferentialy aligned crystals of olivine and orthopyroxene and macroscopic effects of systematic cracks, melt lenses, layering etc. Through the mapping of anisotropic properties within the mantle wedge we can establish patterns of deformation. Volatile content affects olivine alignment, so regions of anomalous volatile content may be evident. Indicators of seismic anisotropy commonly employed in upper mantle studies include shear wave birefringence and mode-conversion between compressional and shear body waves. When combined together, these techniques offer complementary constraints on the location and intensity of anisotropic properties. The eastern coast of southern Kamchatka overlies a vigorous convergent margin where the Pacific plate descends at a rate of almost 80 mm/yr towards the northwest. We extracted seismic anisotropy indicators from two data sets sensitive to the anisotropic properties of the uppermost mantle. Firstly, we evaluated teleseismic receiver functions for a number of sites, and found ample evidence for anisotropicaly-influenced P-to-S mode conversion. Secondly, we measured splitting in S waves of earthquakes with sources within the downgoing slab. The first set of observations provides constraints on the depth ranges where strong changes in anisotropic properties take place. The local splitting data provides constraints on the cumulative strength of anisotropic properties along specific pathways through the mantle wedge and possibly parts of the slab. To explain the vertical stratification of anisotropy implied from receiver functions, and the strong lateral dependence of shear-wave splitting observations, we cannot rely on simple models of mantle wedge behaviour e.g., olivine-crystal alignment through subduction-driven corner flow. Diverse mechanisms can contribute to the observed pattern of anisotropic properties, with volatiles likely being a key influence. For instance, we find evidence in favor of a slow-symmetry-axis anisotropy within the uppermost 10-20 km of the mantle wedge, implying either excessive hydration of the mantle or else a presence of systematically aligned volatile-filled cracks or lenses. Also, shear-wave splitting is weak beneath the Avachinsky-Koryaksky volcanic center, suggesting either vertical flow or the influence of volatiles and/or thermally-enhanced diffusion creep.

Modelling coastal processes by means of innovative integration of remote sensing and modelling analysis

NASA Astrophysics Data System (ADS)

Taramelli, A.; Zanuttigh, B.; Zucca, F.; Dejana, M.; Valentini, E.

2011-12-01

Coastal marine and inland landforms are dynamic systems undergoing adjustments in form at different time and space scales in response to varying conditions external to the system. Coastal emerged and shallow submerged nearshore areas, affected by short-term perturbations, return to their pre-disturbance morphology and generally reach a dynamic equilibrium. Worldwide in the last century we have experienced in increased coastal inundation, erosion and ecosystem losses. However, erosion can result from a number of other factors, such as altered wind and current patterns, high-energy waves, and reduced fluvial sediment inputs. Direct impacts of human activities, including reclamation of coastal wetlands, deforestation, damming, channelization, diversions of coastal waterways, construction of seawalls and other structures, alter circulation patterns. Also indirect human impacts such as land-uses changes through time (eg. from agricultural to industrial use) have affected coastal ecosystems. The objective of this research is to propose innovative remote sensing applications to monitor specific coastal processes in order to use them within a physical modelling to quantify and model their time evolution. The research was applied in two dynamic and densely populated deltas and coastal areas (the Po and the Plymouth delta) by combining multi-sensor spaceborne remote sensing (SAR and OPTICAL) to physical modelling. The main results are: a) deformation and spatiotemporal variations maps in coastal morphology with a special focus to point out the temporal subsidence evolution, b) inter and intra-annual change detection maps that are both used a to feed a coastal physical modelling (MIKE 21). The basic strategy was to highlight the different components of the coastal system environment through: 1) deformation and spatio-temporal variations maps of coastal morphology, by the use of time-stack from 1992 up today of ESA SAR data (ERS-1/2 and ENVISAT-ASAR sensors) were used to produce deformation maps and to point out the temporal evolution and 2) multitemporal hyperspectral endmembers fractions map of coastal morphology, 3) numerical model well-established through remote sensed based procedures and results in order to produce spatio-temporal scenario in coastal areas. The objective was to locate and characterize important coastal indicators for different regions using multitemporal data from the multi-hyperspectral sensors, as well as topographic elevation, SAR and derived products (eg. coherence) data. The identification of different indicators was based on land spectral properties, topography/landforms (low topography), disturbed areas (agricultural, construction), and vegetation distribution. Moreover, the indicators were assessed at seasonal and interannual time scales over two temporal decades horizons starting from 1990 and 2000.

Environmental Filtering Process Has More Important Roles than Dispersal Limitation in Shaping Large-Scale Prokaryotic Beta Diversity Patterns of Grassland Soils.

PubMed

Cao, Peng; Wang, Jun-Tao; Hu, Hang-Wei; Zheng, Yuan-Ming; Ge, Yuan; Shen, Ju-Pei; He, Ji-Zheng

2016-07-01

Despite the utmost importance of microorganisms in maintaining ecosystem functioning and their ubiquitous distribution, our knowledge of the large-scale pattern of microbial diversity is limited, particularly in grassland soils. In this study, the microbial communities of 99 soil samples spanning over 3000 km across grassland ecosystems in northern China were investigated using high-throughput sequencing to analyze the beta diversity pattern and the underlying ecological processes. The microbial communities were dominated by Proteobacteria, Actinobacteria, Acidobacteria, Chloroflexi, and Planctomycetes across all the soil samples. Spearman's correlation analysis indicated that climatic factors and soil pH were significantly correlated with the dominant microbial taxa, while soil microbial richness was positively linked to annual precipitation. The environmental divergence-dissimilarity relationship was significantly positive, suggesting the importance of environmental filtering processes in shaping soil microbial communities. Structural equation modeling found that the deterministic process played a more important role than the stochastic process on the pattern of soil microbial beta diversity, which supported the predictions of niche theory. Partial mantel test analysis have showed that the contribution of independent environmental variables has a significant effect on beta diversity, while independent spatial distance has no such relationship, confirming that the deterministic process was dominant in structuring soil microbial communities. Overall, environmental filtering process has more important roles than dispersal limitation in shaping microbial beta diversity patterns in the grassland soils.

Influence of mineral oil and additives on microhardness and surface chemistry of magnesium oxide (001) surface

NASA Technical Reports Server (NTRS)

Miyoshi, K.; Shigaki, H.; Buckley, D. H.

1982-01-01

X-ray photoelectron spectroscopy analyses and hardness experiments were conducted with cleaved magnesium oxide /001/ surfaces. The magnesium oxide bulk crystals were cleaved into specimens along the /001/ surface, and indentations were made on the cleaved surface in laboratory air, in nitrogen gas, or in degassed mineral oil with and without an additive while not exposing specimen surface to any other environment. The various additives examined contained sulfur, phosphorus, chlorine, or oleic acid. The sulfur-containing additive exhibited the highest hardness and smallest dislocation patterns evidencing plastic deformation; the chlorine-containing additive exhibited the lowest hardness and largest dislocation patterns evidencing plastic deformation. Hydrocarbon and chloride (MgCl2) films formed on the magnesium oxide surface. A chloride film was responsible for the lowest measured hardness.

Crustal deformation at long Valley Caldera, eastern California, 1992-1996 inferred from satellite radar interferometry

USGS Publications Warehouse

Thatcher, W.; Massonnet, D.

1997-01-01

Satellite radar interferometric images of Long Valley caldera show a pattern of surface deformation that resembles that expected from analysis of an extensive suite of ground-based geodetic data. Images from 2 and 4 year intervals respectively, are consistent with uniform movement rates determined from leveling surveys. Synthetic interferograms generated from ellipsoidal-inclusion source models based on inversion of the ground-based data show generally good agreement with the observed images. Two interferograms show evidence for a magmatic source southwest of the caldera in a region not covered by ground measurements. Poorer image quality in the 4 year interferogram indicates that temporal decorrelation of surface radar reflectors is progressively degrading the fringe pattern in the Long Valley region. Copyright 1997 by the American Geophysical Union.

Control of cell nucleus shapes via micropillar patterns.

PubMed

Pan, Zhen; Yan, Ce; Peng, Rong; Zhao, Yingchun; He, Yao; Ding, Jiandong

2012-02-01

We herein report a material technique to control the shapes of cell nuclei by the design of the microtopography of substrates to which the cells adhere. Poly(D,L-lactide-co-glycolide) (PLGA) micropillars or micropits of a series of height or depth were fabricated, and some surprising self deformation of the nuclei of bone marrow stromal cells (BMSCs) was found in the case of micropillars with a sufficient height. Despite severe nucleus deformation, BMSCs kept the ability of proliferation and differentiation. We further demonstrated that the shapes of cell nuclei could be regulated by the appropriate micropillar patterns. Besides circular and elliptoid shapes, some unusual nucleus shapes of BMSCs have been achieved, such as square, cross, dumbbell, and asymmetric sphere-protrusion. Crown Copyright © 2011. Published by Elsevier Ltd. All rights reserved.

How does pedogenesis drive plant diversity?

PubMed

Laliberté, Etienne; Grace, James B; Huston, Michael A; Lambers, Hans; Teste, François P; Turner, Benjamin L; Wardle, David A

2013-06-01

Some of the most species-rich plant communities occur on ancient, strongly weathered soils, whereas those on recently developed soils tend to be less diverse. Mechanisms underlying this well-known pattern, however, remain unresolved. Here, we present a conceptual model describing alternative mechanisms by which pedogenesis (the process of soil formation) might drive plant diversity. We suggest that long-term soil chronosequences offer great, yet largely untapped, potential as 'natural experiments' to determine edaphic controls over plant diversity. Finally, we discuss how our conceptual model can be evaluated quantitatively using structural equation modeling to advance multivariate theories about the determinants of local plant diversity. This should help us to understand broader-scale diversity patterns, such as the latitudinal gradient of plant diversity. Copyright © 2013 Elsevier Ltd. All rights reserved.

Global patterns of the beta diversity-energy relationship in terrestrial vertebrates

NASA Astrophysics Data System (ADS)

Qian, Hong; Xiao, Ming

2012-02-01

Patterns in beta diversity or species turnover, describing the change in species composition between places, have their wide implication for ecological and evolutionary issues. It is thought that beta diversity increases with increasing energy availability, but very few studies have directly tested this hypothesis. We examined the beta diversity-energy relationship for four classes of terrestrial vertebrates (mammals, birds, reptiles, and amphibians) in ecoregions across the world. The relationship was examined for each class in each of six biogeographic realms. We show that beta diversity is generally higher in areas with higher energy availability, measured as annual potential evapotranspiration. A higher level of beta diversity in areas with higher energy availability may have contributed to the well-known latitudinal diversity gradient (i.e., species richness increases towards the equator).

FEM modeling of postseismic deformation of poroelastic material

NASA Astrophysics Data System (ADS)

Kawamoto, S.; Ito, T.; Hirahara, K.

2004-12-01

Following a large earthquake, postseismic deformation in the focal region has been observed by GPS, leveling measurements and the other geodetic measurements. To explain the postseismic deformation, researchers have proposed and well investigated two physical mechanisms of afterslip and viscoelastic relaxation. In some cases, however, there have been observed postseismic deformation which can not be explained by these mechanisms. Therefore, another mechanism has been proposed, where the crust is treated as "poroelastic material". This concept is called "poroelasticity". In this concept, postseismic deformation is caused by pore fluid flow due to the coseismic stress redistribution. We explored, therefore, the postseismic deformation due to pore fluid flow in a poroelastic material using finite element method (FEM), which can easily handle lateral variations of hydraulic diffusivity and elastic or plastic property. We used the FEM program 'CAMBIOT3D' originally developed by Geotech. Lab. Gunma University, Japan (2003). Because this program was developed for soil mechanics, we must have modified so as to calculate deformation due to earthquake faulting. We implemented the 'split node technique' (Melosh and Refsky, 1981) to calculate the coseismic deformation. In addition to this, we modified the program to calculate the deformation taking into account the Skempton's B. This coefficient B determines what fraction of the coseismic stress due to an earthquake is allotted to pore pressure. Without Skempton's B, coseismic pore pressure becomes too large and hence postseismic deformation is calculated too large. We evaluated the postseismic deformation in a poroelastic material to show that the poroelastic deformation is quite different from that of afterslip and viscoelastic relaxation models. In this presentation, we show the postseismic deformation due to pore fluids flow in a poroelastic material and the effect of Skempton's B. Especially, we discuss what different pattern of postseismic deformation is produced depending on the lateral variation of hydraulic diffusivity structures in and around the fault zone, which structures have been differently inferred from fault zone core sampling researches and so on.

Changes in Species Diversity Patterns and Spatial Heterogeneity during the Secondary Succession of Grassland Vegetation on the Loess Plateau, China.

PubMed

Sun, Caili; Chai, Zongzheng; Liu, Guobin; Xue, Sha

2017-01-01

Analyzing the dynamic patterns of species diversity and spatial heterogeneity of vegetation in grasslands during secondary succession could help with the maintenance and management of these ecosystems. Here, we evaluated the influence of secondary succession on grassland plant diversity and spatial heterogeneity of abandoned croplands on the Loess Plateau (China) during four phases of recovery: 1-5, 5-10, 10-20, and 20-30 years. The species composition and dominance of the grassland vegetation changed markedly during secondary succession and formed a clear successional series, with the species assemblage dominated by Artemisia capillaris → Heteropappus altaicus→ A. sacrorum . The diversity pattern was one of low-high-low, with diversity peaking in the 10-20 year phase, thus corresponding to a hump-backed model in which maximum diversity occurring at the intermediate stages. A spatially aggregated pattern prevailed throughout the entire period of grassland recovery; this was likely linked to the dispersal properties of herbaceous plants and to high habitat heterogeneity. We conclude that natural succession was conducive to the successful recovery of native vegetation. From a management perspective, native pioneer tree species should be introduced about 20 years after abandoning croplands to accelerate the natural succession of grassland vegetation.

Tree species, tree genotypes and tree genotypic diversity levels affect microbe-mediated soil ecosystem functions in a subtropical forest.

PubMed

Purahong, Witoon; Durka, Walter; Fischer, Markus; Dommert, Sven; Schöps, Ricardo; Buscot, François; Wubet, Tesfaye

2016-11-18

Tree species identity and tree genotypes contribute to the shaping of soil microbial communities. However, knowledge about how these two factors influence soil ecosystem functions is still lacking. Furthermore, in forest ecosystems tree genotypes co-occur and interact with each other, thus the effects of tree genotypic diversity on soil ecosystem functions merit attention. Here we investigated the effects of tree species, tree genotypes and genotypic diversity levels, alongside soil physicochemical properties, on the overall and specific soil enzyme activity patterns. Our results indicate that tree species identity, tree genotypes and genotypic diversity level have significant influences on overall and specific soil enzyme activity patterns. These three factors influence soil enzyme patterns partly through effects on soil physicochemical properties and substrate quality. Variance partitioning showed that tree species identity, genotypic diversity level, pH and water content all together explained ~30% variations in the overall patterns of soil enzymes. However, we also found that the responses of soil ecosystem functions to tree genotypes and genotypic diversity are complex, being dependent on tree species identity and controlled by multiple factors. Our study highlights the important of inter- and intra-specific variations in tree species in shaping soil ecosystem functions in a subtropical forest.

Tree species, tree genotypes and tree genotypic diversity levels affect microbe-mediated soil ecosystem functions in a subtropical forest

PubMed Central

Purahong, Witoon; Durka, Walter; Fischer, Markus; Dommert, Sven; Schöps, Ricardo; Buscot, François; Wubet, Tesfaye

2016-01-01

Tree species identity and tree genotypes contribute to the shaping of soil microbial communities. However, knowledge about how these two factors influence soil ecosystem functions is still lacking. Furthermore, in forest ecosystems tree genotypes co-occur and interact with each other, thus the effects of tree genotypic diversity on soil ecosystem functions merit attention. Here we investigated the effects of tree species, tree genotypes and genotypic diversity levels, alongside soil physicochemical properties, on the overall and specific soil enzyme activity patterns. Our results indicate that tree species identity, tree genotypes and genotypic diversity level have significant influences on overall and specific soil enzyme activity patterns. These three factors influence soil enzyme patterns partly through effects on soil physicochemical properties and substrate quality. Variance partitioning showed that tree species identity, genotypic diversity level, pH and water content all together explained ~30% variations in the overall patterns of soil enzymes. However, we also found that the responses of soil ecosystem functions to tree genotypes and genotypic diversity are complex, being dependent on tree species identity and controlled by multiple factors. Our study highlights the important of inter- and intra-specific variations in tree species in shaping soil ecosystem functions in a subtropical forest. PMID:27857198

Changes in Species Diversity Patterns and Spatial Heterogeneity during the Secondary Succession of Grassland Vegetation on the Loess Plateau, China

PubMed Central

Sun, Caili; Chai, Zongzheng; Liu, Guobin; Xue, Sha

2017-01-01

Analyzing the dynamic patterns of species diversity and spatial heterogeneity of vegetation in grasslands during secondary succession could help with the maintenance and management of these ecosystems. Here, we evaluated the influence of secondary succession on grassland plant diversity and spatial heterogeneity of abandoned croplands on the Loess Plateau (China) during four phases of recovery: 1–5, 5–10, 10–20, and 20–30 years. The species composition and dominance of the grassland vegetation changed markedly during secondary succession and formed a clear successional series, with the species assemblage dominated by Artemisia capillaris→ Heteropappus altaicus→ A. sacrorum. The diversity pattern was one of low–high–low, with diversity peaking in the 10–20 year phase, thus corresponding to a hump-backed model in which maximum diversity occurring at the intermediate stages. A spatially aggregated pattern prevailed throughout the entire period of grassland recovery; this was likely linked to the dispersal properties of herbaceous plants and to high habitat heterogeneity. We conclude that natural succession was conducive to the successful recovery of native vegetation. From a management perspective, native pioneer tree species should be introduced about 20 years after abandoning croplands to accelerate the natural succession of grassland vegetation. PMID:28900433

Patterns of Nitrogen Fixation and Related Genetic Diversity (nifH) in Microbial Mats and Stromatolites from Different Environments

NASA Astrophysics Data System (ADS)

Beltrán, Y. Y.; Centeno, C.; Falcón, L. I.

2010-04-01

We want to estimate the patterns of nitrogen fixation and the related genetic diversity (nifH) of microbial mats and microbialites on dial and temporal scales along a physicochemical and geographical gradient.

A mechanical model for complex fault patterns induced by fluid overpressures due to dehydration reaction within evaporitic rocks

NASA Astrophysics Data System (ADS)

de Paola, N.; Collettini, C.; Trippetta, F.; Barchi, M. R.; Minelli, G.

2006-12-01

Complex fault patterns, i.e. faults which exhibit a diverse range of strikes, may develop under a weak/absent regional tectonic field (e.g. polygonal faults). We studied a complex synsedimentary fault pattern, geometrically similar to polygonal fault systems, developed during an early Jurassic faulting episode and exposed in the Umbria-Marche Apennines (Italy). Along the passive margin of the African plate, these faults disrupt the Early Jurassic platform overlying the Triassic Evaporites, and bound the subsiding basins where a pelagic succession was successively deposited. We digitised the fault pattern at the regional scale on the grounds of the available geological maps, characterising each fault in terms of attitude, length and throw (i.e. vertical displacement). Fault statistical analysis shows a largely scattered orientation, a high grade of fragmentation, an average length of about 10 km and a constant length/displacement ratio. The measured stratigraphic throw ranges from 300 m to 700 m leading to very low long-term fault slip rates (less than 0.1 mm/yr). We propose a mechanical model where Jurassic faulting has been strongly influenced by the onset of dehydration of the Triassic Evaporites, made of interbedded gypsum layers and dolostones. Dehydration, i.e. anhydritization of the gypsum rich layers, initiated during burial at 1000 m of depth. During initial phases of dehydration increasing fluid pressures trapped at the gypsum-dolostones interface, promote hydrofracturing and faulting within the dolostone layers and subsequent fluid release. Fluid expulsion produces volume contraction of the dehydrating rocks causing vertical thinning and horizontal isotropic extension. This state of non-plane strain is accommodated within the composite gypsum-dolostones sequence by a mix of ductile (flowage and boudinage) and brittle (hydrofracturing and faulting) deformation processes. The stress field caused by the former processes, consistent with an almost isotropic stress distribution within the horizontal plane, explains well the studied complex fault pattern and seems to be dominant over the far-field regional extensional tectonics.

[Applications of 2D and 3D landscape pattern indices in landscape pattern analysis of mountainous area at county level].

PubMed

Lu, Chao; Qi, Wei; Li, Le; Sun, Yao; Qin, Tian-Tian; Wang, Na-Na

2012-05-01

Landscape pattern indices are the commonly used tools for the quantitative analysis of landscape pattern. However, the traditional 2D landscape pattern indices neglect the effects of terrain on landscape, existing definite limitations in quantitatively describing the landscape patterns in mountains areas. Taking the Qixia City, a typical mountainous and hilly region in Shandong Province of East China, as a case, this paper compared the differences between 2D and 3D landscape pattern indices in quantitatively describing the landscape patterns and their dynamic changes in mountainous areas. On the basis of terrain structure analysis, a set of landscape pattern indices were selected, including area and density (class area and mean patch size), edge and shape (edge density, landscape shape index, and fractal dimension of mean patch), diversity (Shannon's diversity index and evenness index) , and gathering and spread (contagion index). There existed obvious differences between the 3D class area, mean patch area, and edge density and the corresponding 2D indices, but no significant differences between the 3D landscape shape index, fractal dimension of mean patch, and Shannon' s diversity index and evenness index and the corresponding 2D indices. The 3D contagion index and 2D contagion index had no difference. Because the 3D landscape pattern indices were calculated by using patch surface area and surface perimeter whereas the 2D landscape pattern indices were calculated by adopting patch projective area and projective perimeter, the 3D landscape pattern indices could be relative accurate and efficient in describing the landscape area, density and borderline, in mountainous areas. However, there were no distinct differences in describing landscape shape, diversity, and gathering and spread between the 3D and 2D landscape pattern indices. Generally, by introducing 3D landscape pattern indices to topographic pattern, the description of landscape pattern and its dynamic change would be relatively accurate.

Computer driven optical keratometer and method of evaluating the shape of the cornea

NASA Technical Reports Server (NTRS)

Baroth, Edmund C. (Inventor); Mouneimme, Samih A. (Inventor)

1994-01-01

An apparatus and method for measuring the shape of the cornea utilize only one reticle to generate a pattern of rings projected onto the surface of a subject's eye. The reflected pattern is focused onto an imaging device such as a video camera and a computer compares the reflected pattern with a reference pattern stored in the computer's memory. The differences between the reflected and stored patterns are used to calculate the deformation of the cornea which may be useful for pre-and post-operative evaluation of the eye by surgeons.

Development of integrated protocols to track the deposition and impacts of metal contaminants in tidal riverine environments

NASA Astrophysics Data System (ADS)

Roe, Helen M.; Patterson, R. Timothy; Nasser, Nawaf; Edwards, Robin J.; Graham, Conor

2016-04-01

Tidally-influenced rivers are particularly vulnerable to the effects of metal contamination, yet are amongst the most complex fluvial environments in terms of their sediment deposition and transport patterns. We present the results of an interdisciplinary study that aims to elucidate the fluxes and deposition of metal contaminants in a tidally-influenced river system in Northern Ireland, with a view to developing protocols that will have wide applicability for the monitoring and assessment of metal contaminants in similar environments in other regions. We employ a novel methodology that combines ICPMS analysis of sediments, ITRAX-based core analysis and the examination a important group of shelled protozoans (foraminifera), which occur widely in tidal riverine environments, and which are highly sensitive to metal contamination. The responses shown by the group vary between species and with different levels of contaminant exposure. Some species, for example, show increased relative abundances in proximity to discharge sources, whilst others develop chamber deformities. Application of our integrated multiproxy approach to the analysis of surface sediment samples and cores provides a framework for assessing both the spatial and temporal patterns of metal deposition and the impact of contaminants on the biota. Modern sediment samples (n=90) were collected at varying distances from a point contamination source (a former industrial site) in different morpho-sedimentary settings. The impact of 25 measured variables on the modern foraminiferal faunas was considered, including 20 metals, pH, conductivity, elevation and particle size. Channel sediments in close proximity to the contamination source and with the highest levels of Fe, Cu, Zn, Mg and As, yielded the sparsest foraminiferal faunas (Shannon Diversity Index values 0-1.5), whilst the highest prevalence of foraminiferids showing chamber deformities were observed in channel edge and levée bank sites. Kernal density plots showing metal loading and foraminiferal concentrations across the site aided in determining spatial trends. The sediment core data revealed that deformed foraminiferal specimens can extend >15 cm below the contemporary floodplain surface to horizons that pre-date the historical onset of the contamination, suggesting vertical mobilisation of sediment and/or infaunal migration. Etching of the foraminiferal tests in association with reduced pH conditions was also observed for some species. Biometric analysis of tests using SEM imagery further aided in the identification of deformities and the delimitation of graded responses to contaminants. The results of this study of core and surficial samples indicate that the adoption of integrated methodologies that combine established geochemical analysis techniques (e.g. ICPMS analysis) with the observed ecophenotypic response of key indicator microfossil groups (e.g. foraminifera) can provide invaluable data on habitat responses to environmental contamination. Such long-term habitat evaluation data is invaluable to policy makers and planners when prioritising management and remediation efforts.

A Continental Rifting Event in Tanzania Revealed by Envisat and ALOS InSAR Observations

NASA Astrophysics Data System (ADS)

Oyen, A. M.; Marinkovic, P. S.; Wauthier, C.; d'Oreye, N.; Hanssen, R. F.

2008-11-01

From July to September 2007 a series of moderate earthquakes struck the area South of the Gelai volcano, located on the Eastern branch of the East African Rift (North Tanzania). Most deformation patterns detected by InSAR in these period are very complex, impeding proper interpretation. To decrease the complexity of the models of the deformation, this study proposes two strategies of combining data from different tracks and sensors. In a first stage a method is proposed to correct unwrapping errors in C-band using the much more coherent L-band data. Furthermore, a modeling optimization method is explored, which aims at the decomposition of the deformation in smaller temporal baselines, by means of creating new, artificial interferograms and the use of models. Due to the higher coherence level and fewer phase cycles in L-band, the deformation interpretation is facilitated but model residual interpretation has become more difficult compared to C-band.

Boundary migration in a 3D deformed microstructure inside an opaque sample

DOE PAGES

Zhang, Y. B.; Budai, J. D.; Tischler, J. Z.; ...

2017-06-30

How boundaries surrounding recrystallization grains migrate through the 3D network of dislocation boundaries in deformed crystalline materials is unknown and critical for the resulting recrystallized crystalline materials. Furthermore, by using X-ray Laue diffraction microscopy, we show for the first time the migration pattern of a typical recrystallization boundary through a well-characterized deformation matrix. The data provide a unique possibility to investigate effects of both boundary misorientation and plane normal on the migration, information which cannot be accessed with any other techniques. Our results show that neither of these two parameters can explain the observed migration behavior. Instead we suggest thatmore » the subdivision of the deformed microstructure ahead of the boundary plays the dominant role. Our experimental observations challenge the assumptions of existing recrystallization theories, and set the stage for determination of mobilities of recrystallization boundaries.« less

New isomer in 96Y marking the onset of deformation at N = 57

NASA Astrophysics Data System (ADS)

Iskra, Ł. W.; Fornal, B.; Leoni, S.; Bocchi, G.; Petrovici, A.; Porzio, C.; Blanc, A.; De France, G.; Jentschel, M.; Köster, U.; Mutti, P.; Régis, J.-M.; Simpson, G.; Soldner, T.; Ur, C. A.; Urban, W.; Bazzacco, D.; Benzoni, G.; Bottoni, S.; Bruce, A.; Cieplicka-Oryńczak, N.; Crespi, F. C. L.; Fraile, L. M.; Korten, W.; Kröll, T.; Lalkovski, S.; Márginean, N.; Michelagnoli, C.; Melon, B.; Mengoni, D.; Million, B.; Nannini, A.; Napoli, D.; Podolyák, Zs.; Regan, P. H.; Szpak, B.

2017-01-01

The level scheme of 96Y was significantly extended and a new 201 ns isomer was located at 1655 keV excitation energy, with spin-parity assignment of 5± or 6-. The isomer decays to spherical low-spin structure by transitions with large hindrance and is fed by a short cascade which resembles the beginning of a rotational band. This is in analogy with the feeding and decay pattern of the 4- isomer in 98Y, here confirmed, by lifetime analysis, as a bandhead of a rotational structure with sizable deformation. It is suggested that the new isomer in 96Y arises from a shape change between deformed and spherical configurations, which indicates the appearance of deformation already at N = 57 in the yttrium chain. The experimental findings for 96Y are strengthened by theoretical calculations based on the complex Excited Vampir model.

Hiding the weakness: structural robustness using origami design

NASA Astrophysics Data System (ADS)

Liu, Bin; Santangelo, Christian; Cohen, Itai

2015-03-01

A non-deformable structure is typically associated with infinitely stiff materials that resist distortion. In this work, we designed a structure with a region that will not deform even though it is made of arbitrarily compliant materials. More specifically, we show that a foldable sheet with a circular hole in the middle can be deformed externally with the internal geometry of the hole unaffected. Instead of strengthening the local stiffness, we fine tune the crease patterns so that all the soft modes that can potentially deform the internal geometry are not accessible through strain on the external boundary. The inner structure is thus protected by the topological mechanics, based on the detailed geometry of how the vertices in the foldable sheet are connected. In this way, we isolate the structural robustness from the mechanical properties of the materials, which introduces an extra degree of freedom for structural design.

Resistance of mature Arabidopsis plants to mechanical deformation in relation to g-force during development

NASA Technical Reports Server (NTRS)

Brown, A. H.

1983-01-01

Arabidopsis plants were grown in centrifuge tubes under well standardized culture conditions. Each plant was subjected to centrifugation (roots out) for 10 min at one of a series of centripetal forces between 7 and 390g. No deformation was observed in plants centrifuged at less than 35g. An 'average' degree of deformation was attained at about 60g. All plants exposed to more than 95g were maximally deformed but none was broken nor otherwise damaged irreversibly even at 390g. In every case new shoot growth continued normally after the centrifugation. A plant population grown on horizontal clinostats (0.5 rpm) under culture conditions exactly the same as for the upright plants responded to centrifugation stress in a way that was not substantially different from the response pattern of the plants cultured upright at 1g.

Deformation relief evolution during sliding friction of Hadfield steel single crystal

NASA Astrophysics Data System (ADS)

Lychagin, D. V.; Filippov, A. V.; Novitskaya, O. S.; Kolubaev, A. V.; Sizova, O. V.

2017-12-01

The paper deals with the evolution of the deformation relief formed on lateral faces of single crystals of Hadfield steel during dry sliding friction. The use of single crystals with the predetermined orientation enables to analyze the development of shear systems subject to the duration of tribological tests. As the test duration increases, slip bands are curved and thicken in the near-surface region. After 24 hours of friction, single crystals of Hadfield steel demonstrate the maximum hardening. Afterwards, the wear process begins, which is followed by the repeated strain hardening of the specimens. After 48 hours of friction, the height of the deformation relief nearly halves on all of the three faces, as compared to that observed after 24 hours of friction. Differences in the propagation height of slip bands on the faces occur due to the uneven running-in as well as the complex involvement pattern of shear systems into the deformation process.

Necessary Sequencing Depth and Clustering Method to Obtain Relatively Stable Diversity Patterns in Studying Fish Gut Microbiota.

PubMed

Xiao, Fanshu; Yu, Yuhe; Li, Jinjin; Juneau, Philippe; Yan, Qingyun

2018-05-25

The 16S rRNA gene is one of the most commonly used molecular markers for estimating bacterial diversity during the past decades. However, there is no consistency about the sequencing depth (from thousand to millions of sequences per sample), and the clustering methods used to generate OTUs may also be different among studies. These inconsistent premises make effective comparisons among studies difficult or unreliable. This study aims to examine the necessary sequencing depth and clustering method that would be needed to ensure a stable diversity patterns for studying fish gut microbiota. A total number of 42 samples dataset of Siniperca chuatsi (carnivorous fish) gut microbiota were used to test how the sequencing depth and clustering may affect the alpha and beta diversity patterns of fish intestinal microbiota. Interestingly, we found that the sequencing depth (resampling 1000-11,000 per sample) and the clustering methods (UPARSE and UCLUST) did not bias the estimates of the diversity patterns during the fish development from larva to adult. Although we should acknowledge that a suitable sequencing depth may differ case by case, our finding indicates that a shallow sequencing such as 1000 sequences per sample may be also enough to reflect the general diversity patterns of fish gut microbiota. However, we have shown in the present study that strict pre-processing of the original sequences is required to ensure reliable results. This study provides evidences to help making a strong scientific choice of the sequencing depth and clustering method for future studies on fish gut microbiota patterns, but at the same time reducing as much as possible the costs related to the analysis.

Deformation partitioning provides insight into elastic, plastic, and viscous contributions to bone material behavior.

PubMed

Ferguson, V L

2009-08-01

The relative contributions of elastic, plastic, and viscous material behavior are poorly described by the separate extraction and analysis of the plane strain modulus, E('), the contact hardness, H(c) (a hybrid parameter encompassing both elastic and plastic behavior), and various viscoelastic material constants. A multiple element mechanical model enables the partitioning of a single indentation response into its fundamental elastic, plastic, and viscous deformation components. The objective of this study was to apply deformation partitioning to explore the role of hydration, tissue type, and degree of mineralization in bone and calcified cartilage. Wet, ethanol-dehydrated, and PMMA-embedded equine cortical bone samples and PMMA-embedded human femoral head tissues were analyzed for contributions of elastic, plastic and viscous deformation to the overall nanoindentation response at each site. While the alteration of hydration state had little effect on any measure of deformation, unembedded tissues demonstrated significantly greater measures of resistance to plastic deformation than PMMA-embedded tissues. The PMMA appeared to mechanically stabilize the tissues and prevent extensive permanent deformation within the bone material. Increasing mineral volume fraction correlated with positive changes in E('), H(c), and resistance to plastic deformation, H; however, the partitioned deformation components were generally unaffected by mineralization. The contribution of viscous deformation was minimal and may only play a significant role in poorly mineralized tissues. Deformation partitioning enables a detailed interpretation of the elastic, plastic, and viscous contributions to the nanomechanical behavior of mineralized tissues that is not possible when examining modulus and contact hardness alone. Varying experimental or biological factors, such as hydration or mineralization level, enables the understanding of potential mechanisms for specific mechanical behavior patterns that would otherwise be hidden within a more complex set of material property parameters.

Terrestrial laser scanning point clouds time series for the monitoring of slope movements: displacement measurement using image correlation and 3D feature tracking

NASA Astrophysics Data System (ADS)

Bornemann, Pierrick; Jean-Philippe, Malet; André, Stumpf; Anne, Puissant; Julien, Travelletti

2016-04-01

Dense multi-temporal point clouds acquired with terrestrial laser scanning (TLS) have proved useful for the study of structure and kinematics of slope movements. Most of the existing deformation analysis methods rely on the use of interpolated data. Approaches that use multiscale image correlation provide a precise and robust estimation of the observed movements; however, for non-rigid motion patterns, these methods tend to underestimate all the components of the movement. Further, for rugged surface topography, interpolated data introduce a bias and a loss of information in some local places where the point cloud information is not sufficiently dense. Those limits can be overcome by using deformation analysis exploiting directly the original 3D point clouds assuming some hypotheses on the deformation (e.g. the classic ICP algorithm requires an initial guess by the user of the expected displacement patterns). The objective of this work is therefore to propose a deformation analysis method applied to a series of 20 3D point clouds covering the period October 2007 - October 2015 at the Super-Sauze landslide (South East French Alps). The dense point clouds have been acquired with a terrestrial long-range Optech ILRIS-3D laser scanning device from the same base station. The time series are analyzed using two approaches: 1) a method of correlation of gradient images, and 2) a method of feature tracking in the raw 3D point clouds. The estimated surface displacements are then compared with GNSS surveys on reference targets. Preliminary results tend to show that the image correlation method provides a good estimation of the displacement fields at first order, but shows limitations such as the inability to track some deformation patterns, and the use of a perspective projection that does not maintain original angles and distances in the correlated images. Results obtained with 3D point clouds comparison algorithms (C2C, ICP, M3C2) bring additional information on the displacement fields. Displacement fields derived from both approaches are then combined and provide a better understanding of the landslide kinematics.

Fryns anophthalmia-plus syndrome: two rare cases.

PubMed

Bozkurt, O; Bidev, D; Sari, F N; Dizdar, E A; Ulu, H O; Uras, N; Oguz, S S; Canpolat, F E; Dilmen, U

2014-01-01

Fryns anophthalmia-plus syndrome is a rare syndrome with clinical diversity primarily including anophthalmia/microphthalmia, facial clefts, cleft lip/palate, ear and nasal deformities. Here we present two different cases of APS with anopthalmia/microphthalmia, cleft palate, low set ears, ventriculomegaly and one of which had intestinal non-fixation anomaly not described in the literature before.

Stiff upper lip: Labrum deformity and functionality in bees (Hymenoptera: Apoidea)

USDA-ARS?s Scientific Manuscript database

In hyper-diverse groups such as Hymenoptera, a variety of structures with different, complementary functions are used for feeding. Although the function of the parts such as the mandibles is obvious, the use of others, like the labrum, is more difficult to discern. Here, we discuss the labrum’s func...

Out-of-Plane Designed Soft Metasurface for Tunable Surface Plasmon Polariton.

PubMed

Liu, Xin; Huang, Zhao; Zhu, Chengkai; Wang, Li; Zang, Jianfeng

2018-02-14

Reliable and repeatable tunability gives functional diversity for reconfigurable plasmonics devices, while reversible and large mechanical deformation enabled by soft materials provides a new way for the global or partial regulation of metadevices. Here, we demonstrate a soft metasurface with an out-of-plane design for tuning the energy of surface plasmon polaritons (SPPs) bloch wave using theory, simulation, and experiments. Our metasurface is composed of two-layered gold nanoribbon arrays (2GNRs) on a soft substrate. The out-of-plane coupling mechanism is systematically analyzed in terms of separation height effect. Moreover, by harnessing mechanical deformation, continuously tunable plasmonic resonance has been achieved in the visible and near-infrared ranges. We further studied the angle-dependent reflection spectra of our metastructure. Compared with its planar counterpart, our soft and two-layered metastructure exhibits diverse tunability and significant field enhancement by out-of-plane interactions. Our approach in designing soft metasurface with out-of-plane structures can be extended to more-complex photonic devices and finds prominent applications such as biosensing, high-density plasmonic circuits, surface-enhanced luminescence, and surface-enhanced Raman scattering.

Release of radiogenic noble gases as a new signal of rock deformation

DOE Office of Scientific and Technical Information (OSTI.GOV)

Bauer, Stephen J.; Gardner, W. Payton; Lee, Hyunwoo

In this paper we investigate the release of radiogenic noble gas isotopes during mechanical deformation. We developed an analytical system for dynamic mass spectrometry of noble gas composition and helium release rate of gas produced during mechanical deformation of rocks. Our results indicate that rocks release accumulated radiogenic helium and argon from mineral grains as they undergo deformation. We found that the release of accumulated 4He and 40Ar from rocks follows a reproducible pattern and can provide insight into the deformation process. Increased gas release can be observed before dilation, and macroscopic failure is observed during high-pressure triaxial rock deformationmore » experiments. Accumulated radiogenic noble gases can be released due to fracturing of mineral grains during small-scale strain in Earth materials. Helium and argon are highly mobile, conservative species and could be used to provide information on changes in the state of stress and strain in Earth materials, and as an early warning signal of macroscopic failure. These results pave the way for the use of noble gases to trace and monitor rock deformation for earthquake prediction and a variety of other subsurface engineering projects.« less

Release of radiogenic noble gases as a new signal of rock deformation

DOE PAGES

Bauer, Stephen J.; Gardner, W. Payton; Lee, Hyunwoo

2016-10-09

In this paper we investigate the release of radiogenic noble gas isotopes during mechanical deformation. We developed an analytical system for dynamic mass spectrometry of noble gas composition and helium release rate of gas produced during mechanical deformation of rocks. Our results indicate that rocks release accumulated radiogenic helium and argon from mineral grains as they undergo deformation. We found that the release of accumulated 4He and 40Ar from rocks follows a reproducible pattern and can provide insight into the deformation process. Increased gas release can be observed before dilation, and macroscopic failure is observed during high-pressure triaxial rock deformationmore » experiments. Accumulated radiogenic noble gases can be released due to fracturing of mineral grains during small-scale strain in Earth materials. Helium and argon are highly mobile, conservative species and could be used to provide information on changes in the state of stress and strain in Earth materials, and as an early warning signal of macroscopic failure. These results pave the way for the use of noble gases to trace and monitor rock deformation for earthquake prediction and a variety of other subsurface engineering projects.« less

Modeling multiscale evolution of numerous voids in shocked brittle material.

PubMed

Yu, Yin; Wang, Wenqiang; He, Hongliang; Lu, Tiecheng

2014-04-01

The influence of the evolution of numerous voids on macroscopic properties of materials is a multiscale problem that challenges computational research. A shock-wave compression model for brittle material, which can obtain both microscopic evolution and macroscopic shock properties, was developed using discrete element methods (lattice model). Using a model interaction-parameter-mapping procedure, qualitative features, as well as trends in the calculated shock-wave profiles, are shown to agree with experimental results. The shock wave splits into an elastic wave and a deformation wave in porous brittle materials, indicating significant shock plasticity. Void collapses in the deformation wave were the natural reason for volume shrinkage and deformation. However, media slippage and rotation deformations indicated by complex vortex patterns composed of relative velocity vectors were also confirmed as an important source of shock plasticity. With increasing pressure, the contribution from slippage deformation to the final plastic strain increased. Porosity was found to determine the amplitude of the elastic wave; porosity and shock stress together determine propagation speed of the deformation wave, as well as stress and strain on the final equilibrium state. Thus, shock behaviors of porous brittle material can be systematically designed for specific applications.

Extrusional Tectonics over Plate Corner: an Example in Northern Taiwan

NASA Astrophysics Data System (ADS)

Lu, Chia-Yu; Lee, Jian-Cheng; Li, Zhinuo; Lee, Ching-An; Yeh, Chia-Hung

2016-04-01

In northern Taiwan, contraction, transcurrent shearing, block rotation and extension are four essential tectonic deformation mechanisms involved in the progressive deformation of this arcuate collision mountain belt. The neotectonic evolution of the Taiwan mountain belt is mainly controlled not only by the oblique convergence between the Eurasian plate and the Philippine Sea plate but also the corner shape of the plate boundary. Based on field observations and analyses, and taking geophysical data (mostly GPS) and experimental modelling into account, we interpret the curved belt of northern Taiwan as a result of of contractional deformation (with compression, thrust-sheet stacking & folding, back thrust duplex & back folding) that induced vertical extrusion, combined with increasing transcurrent & rotational deformation (with transcurrent faulting, bookshelf-type strike-slip faulting and block rotation) that induced transcurrent/rotational extrusion and extension deformation which in turn induced extensional extrusion. As a consequence, a special type of extrusional folds was formed in association with contractional, transcurrent & rotational and extensional extrusions subsequently. The extrusional tectonics in northern Taiwan reflect a single, albeit complicated, regional pattern of deformation. The crescent-shaped mountain belt of Northeastern Taiwan develops in response to oblique indentation by an asymmetric wedge indenter, retreat of Ryukyu trench and opening of the Okinawa trough.

Extrusional Tectonics at Plate Corner: an Example in Northern Taiwan

NASA Astrophysics Data System (ADS)

Lu, C. Y.; Lee, J. C.; Li, Z.; Yeh, C. H.; Lee, C. A.

2015-12-01

In northern Taiwan, contraction, transcurrent shearing, block rotation and extension are four essential tectonic deformation mechanisms involved in the progressive deformation of this arcuate collision mountain belt. The neotectonic evolution of the Taiwan mountain belt is mainly controlled not only by the oblique convergence between the Eurasian plate and the Philippine Sea plate but also the corner shape of the plate boundary. Based on field observations and analyses, and taking geophysical data (mostly GPS) and experimental modelling into account, we interpret the curved belt of northern Taiwan as a result of of contractional deformation (with compression, thrust-sheet stacking & folding, back thrust duplex & back folding) that induced vertical extrusion, combined with increasing transcurrent & rotational deformation (with transcurrent faulting, bookshelf-type strike-slip faulting and block rotation) that induced transcurrent/rotational extrusion and extension deformation which in turn induced extensional extrusion. As a consequence, a special type of extrusional folds was formed in association with contractional, transcurrent & rotational and extensional extrusions subsequently. The extrusional tectonics in northern Taiwan reflect a single, albeit complicated, regional pattern of deformation. The crescent-shaped mountain belt of Northeastern Taiwan develops in response to oblique indentation by an asymmetric wedge indenter and opening of the Okinawa trough at plate corner.

Network patterns in exponentially growing two-dimensional biofilms

NASA Astrophysics Data System (ADS)

Zachreson, Cameron; Yap, Xinhui; Gloag, Erin S.; Shimoni, Raz; Whitchurch, Cynthia B.; Toth, Milos

2017-10-01

Anisotropic collective patterns occur frequently in the morphogenesis of two-dimensional biofilms. These patterns are often attributed to growth regulation mechanisms and differentiation based on gradients of diffusing nutrients and signaling molecules. Here, we employ a model of bacterial growth dynamics to show that even in the absence of growth regulation or differentiation, confinement by an enclosing medium such as agar can itself lead to stable pattern formation over time scales that are employed in experiments. The underlying mechanism relies on path formation through physical deformation of the enclosing environment.

Large-scale dark diversity estimates: new perspectives with combined methods.

PubMed

Ronk, Argo; de Bello, Francesco; Fibich, Pavel; Pärtel, Meelis

2016-09-01

Large-scale biodiversity studies can be more informative if observed diversity in a study site is accompanied by dark diversity, the set of absent although ecologically suitable species. Dark diversity methodology is still being developed and a comparison of different approaches is needed. We used plant data at two different scales (European and seven large regions) and compared dark diversity estimates from two mathematical methods: species co-occurrence (SCO) and species distribution modeling (SDM). We used plant distribution data from the Atlas Florae Europaeae (50 × 50 km grid cells) and seven different European regions (10 × 10 km grid cells). Dark diversity was estimated by SCO and SDM for both datasets. We examined the relationship between the dark diversity sizes (type II regression) and the overlap in species composition (overlap coefficient). We tested the overlap probability according to the hypergeometric distribution. We combined the estimates of the two methods to determine consensus dark diversity and composite dark diversity. We tested whether dark diversity and completeness of site diversity (log ratio of observed and dark diversity) are related to various natural and anthropogenic factors differently than simple observed diversity. Both methods provided similar dark diversity sizes and distribution patterns; dark diversity is greater in southern Europe. The regression line, however, deviated from a 1:1 relationship. The species composition overlap of two methods was about 75%, which is much greater than expected by chance. Both consensus and composite dark diversity estimates showed similar distribution patterns. Both dark diversity and completeness measures exhibit relationships to natural and anthropogenic factors different than those exhibited by observed richness. In summary, dark diversity revealed new biodiversity patterns which were not evident when only observed diversity was examined. A new perspective in dark diversity studies can incorporate a combination of methods.

DOE Office of Scientific and Technical Information (OSTI.GOV)

Uchida, Y; Tachibana, H

Purpose: For head and neck VMAT (HN-VMAT), variations of position and deformation of patient’s shoulders is a concern to affect inaccuracy of dose distribution. It has been reported that the setup error of the shoulders was variable from 5 mm – 1 cm. The beams of the HN-VMAT pass through the shoulders. We assessed the impact of shoulder deformation to dose distribution for HN-VMAT. Methods: One HN-VMAT plan was generated using a patient’s CT. The patient’s CT was deformed using ImSimQA (Oncology Systems Limited, Shrewsbury, Shropshire, UK) to generate several patterns of the shoulders’ deformations when the right and leftmore » humeral heads were shifted with 3, 6, and 15 mm in the superior and inferior directions (SI), 3, 5, and 15 mm in the anterior and posterior directions (AP), and 5 and 15 mm in the right or left direction (LR). DVH comparison was performed in the different deformation patterns. The dosimetric parameters of D95% for CTV70Gy, CTV60Gy and CTV54Gy and dmax for Spinal cord were also measured. Gamma index evaluation (Criteria: 3%/2mm) was performed to exhibit clinically tolerable area in the comparison. Results: DVH comparison shows similar for all structures. As the comparison for the dosimetric parameters, the variations of D95% in the LR and AP were within 1%. There were larger variations in the SI than those in the other directions, however were within 1.5%. In gamma index evaluation, the small spots with higher gamma index values were appeared when the shift was 6 mm, however the pass ratio was 99.13%. Conclusion: HN-VMAT should be robust for shoulder deformation and geometric accuracy within 6 mm from patient’s setup and image-guided radiotherapy may be clinically acceptable for target dose coverage or normal tissue dose sparing.« less

Non-linear feedbacks drive strain partitioning within an active orogen, southern Alaska

NASA Astrophysics Data System (ADS)

Hooks, B.; Koons, P. O.; Upton, P.

2011-12-01

Temperature plays a very important role in the partitioning of deformation within an active orogen. Local variations in the thermal structure of actively uplifting areas can reinforce focused partitioning of strain locally, whereas regional variations can alter deformation patterns on a much broader scale resulting in the re-organization of an entire orogen. Within southern Alaska, the Yakutat micro-terrane has been subducting beneath North America over the previous ~10 Ma. Early deformation related to this event drove uplift of the Alaska Range, as evidenced by stratigraphic and thermochronologic datasets. This was followed by a southerly discontinuous spatial jump in the deformation front to the coastal St. Elias Range. Here we present 3D numerical models that simulate deformation of Earth materials given assigned applied velocity boundary conditions and mechanical and thermal constitutive relationships on a macro- (plate boundary) and meso-scale (<50-km). The goal is to reproduce first-order strain and uplift patterns within this evolving orogen. The macro-scale model undergoes a spatial and temporal reorganization of deformation as strain is progressively shifted to a trench-ward orogenic wedge, the inlet orogen. Subduction related cooling of the fore-arc (i.e. tectonic refrigeration) provides control on the location of the inlet orogen. This control is based upon the creation of a thin sliver of cold, strong material along the mega-thrust interface. The stronger mega-thrust facilitates more efficient transfer of strain, driving the formation of the inlet orogen and determining the location of its frontal toe. This toe is further stabilized by upward displacement of the upper crust over the refrigerated section. This upward motion causes thermal weakening of the upper crust as a tectonic aneurysm with the location controlled by the thermally strengthened lower crust. The net result is an ever weakening upper crust that focuses strain creating dramatic topography, extreme rates of erosion and uplift, and fast exhumation.

Temporal deformation pattern in acute and late phases of ST-elevation myocardial infarction: incremental value of longitudinal post-systolic strain to assess myocardial viability.

PubMed

Huttin, Olivier; Marie, Pierre-Yves; Benichou, Maxime; Bozec, Erwan; Lemoine, Simon; Mandry, Damien; Juillière, Yves; Sadoul, Nicolas; Micard, Emilien; Duarte, Kevin; Beaumont, Marine; Rossignol, Patrick; Girerd, Nicolas; Selton-Suty, Christine

2016-10-01

Identification of transmural extent and degree of non-viability after ST-segment elevation myocardial infarction (STEMI) is clinically important. The objective of the present study was to assess the regional mechanics and temporal deformation patterns using speckle tracking echocardiography (STE) in acute and later phases of STEMI to predict myocardial damage in these patients. Ninety-eight patients with first STEMI underwent both echocardiography and cardiac magnetic resonance imaging in acute phase and at 6 months follow-up with 2D STE-derived measurements of peak longitudinal strain (PLS), Pre-STretch index (PST) and post-systolic deformation index (PSI). For each segment, late gadolinium enhancement (LGE) was defined as transmural (LGE >66 %) or non-transmural (<66 %). Global deformation values were significantly correlated with LVEFCMR and infarct size at both visits. A significantly lower value of segmental PLS and higher PSI and PST in necrotic segments were observed comparatively to control, adjacent and remote segments. The best parameters to predict transmural extent in acute phase were PSI with a cutoff value of 8 % (AUC: 0.84) and PLS with a cutoff value of -13 % (AUC: 0.86). PST showed high specificity, but poor sensitivity in predicting transmural extent. More importantly, the addition of PSI and PST to PLS in acute phase was associated with improved prediction of viability at 6 months (integrated discrimination improvement 2.5 % p < 0.01; net reclassification improvement 27 %; p < 0.01). All systolic deformation values separated transmural from non-transmural scarring. PLS combined with additional information relative to post-systolic deformation appears to be the most informative parameters to predict the transmural extent of MI in the early and late phases of MI. http://clinicaltrials.gov/show/NCT01109225 ; NCT01109225.

What factors shape genetic diversity in cetaceans?

PubMed

Vachon, Felicia; Whitehead, Hal; Frasier, Timothy R

2018-02-01

Understanding what factors drive patterns of genetic diversity is a central aspect of many biological questions, ranging from the inference of historical demography to assessing the evolutionary potential of a species. However, as a larger number of datasets have become available, it is becoming clear that the relationship between the characteristics of a species and its genetic diversity is more complex than previously assumed. This may be particularly true for cetaceans, due to their relatively long lifespans, long generation times, complex social structures, and extensive ranges. In this study, we used microsatellite and mitochondrial DNA data from a systematic literature review to produce estimates of diversity for both markers across 42 cetacean species. Factors relating to demography, distribution, classification, biology, and behavior were then tested using phylogenetic methods and linear models to assess their relative influence on the genetic diversity of both marker types. The results show that while relative nuclear diversity is correlated with population size, mitochondrial diversity is not. This is particularly relevant given the widespread use of mitochondrial DNA to infer historical demography. Instead, mitochondrial diversity was mostly influenced by the range and social structure of the species. In addition to population size, habitat type (neritic vs. oceanic) had a significant correlation with relative nuclear diversity. Combined, these results show that many often-unconsidered factors are likely influencing patterns of genetic diversity in cetaceans, with implications regarding how to interpret, and what can be inferred from, existing patterns of diversity.

LOCAL VS. REGIONAL EFFECTS ON FISH DIVERSITY AS MEDIATED BY STREAMFLOW DISTURBANCE REGIME

EPA Science Inventory

abstract

The interplay of local and regional processes on fish diversity is poorly understood, especially related to patterns of streamflow disturbance regime. Articulation of the relationship between flow disturbance patterns and river fishes across local to regional scal...

Hilbert-Curve Fractal Antenna With Radiation- Pattern Diversity

NASA Technical Reports Server (NTRS)

Nessel, James A.; Miranda, Felix A.; Zaman, Afroz

2007-01-01

A printed, folded, Hilbert-curve fractal microwave antenna has been designed and built to offer advantages of compactness and low mass, relative to other antennas designed for the same operating frequencies. The primary feature of the antenna is that it offers the advantage of radiation-pattern diversity without need for electrical or mechanical switching: it can radiate simultaneously in an end-fire pattern at a frequency of 2.3 GHz (which is in the S-band) and in a broadside pattern at a frequency of 16.8 GHz (which is in the Ku-band). This radiation-pattern diversity could be utilized, for example, in applications in which there were requirements for both S-band ground-to-ground communications and Ku-band ground-to-aircraft or ground-to-spacecraft communications. The lack of switching mechanisms or circuitry makes this antenna more reliable, easier, and less expensive to fabricate than it otherwise would be.

Distributed and localized horizontal tectonic deformation as inferred from drainage network geometry and topology: A case study from Lebanon

NASA Astrophysics Data System (ADS)

Goren, Liran; Castelltort, Sébastien; Klinger, Yann

2016-04-01

Partitioning of horizontal deformation between localized and distributed modes in regions of oblique tectonic convergence is, in many cases, hard to quantify. As a case study, we consider the Dead Sea Fault System that changes its orientation across Lebanon and forms a restraining bend. The oblique deformation along the Lebanese restraining bend is characterized by a complex suite of tectonic structures, among which, the Yammouneh fault, is believed to be the main strand that relays deformation from the southern section to the northern section of the Dead Sea Fault System. However, uncertainties regarding slip rates along the Yammouneh fault and strain partitioning in Lebanon still prevail. In the current work we use the geometry and topology of river basins together with numerical modeling to evaluate modes and rates of the horizontal deformation in Mount Lebanon that is associated with the Arabia-Sinai relative plate motion. We focus on river basins that drain Mount Lebanon to the Mediterranean and originate close to the Yammouneh fault. We quantify a systematic counterclockwise rotation of these basins and evaluate drainage area disequilibrium using an application of the χ mapping technique, which aims at estimating the degree of geometrical and topological disequilibrium in river networks. The analysis indicates a systematic spatial pattern whereby tributaries of the rotated basins appear to experience drainage area loss or gain with respect to channel length. A kinematic model that is informed by river basin geometry reveals that since the late Miocene, about a quarter of the relative plate motion parallel to the plate boundary has been distributed along a wide band of deformation to the west of the Yammouneh fault. Taken together with previous, shorter-term estimates, the model indicates little variation of slip rate along the Yammouneh fault since the late Miocene. Kinematic model results are compatible with late Miocene paleomagnetic rotations in western Mount Lebanon. A numerical landscape evolution experiment demonstrates the emergence of a similar χ pattern of drainage area disequilibrium in response to progressive distributed shear deformation of river basins with relatively minor drainage network reorganization.

Soft tissue thin-plate spline analysis of pre-pubertal Korean and European-Americans with untreated Angle's Class III malocclusions.

PubMed

Singh, G D; McNamara, J A; Lozanoff, S

1999-01-01

The purpose of this study was to assess soft tissue facial matrices in subjects of diverse ethnic origins with underlying dentoskeletal malocclusions. Pre-treatment lateral cephalographs of 71 Korean and 70 European-American children aged between 5 and 11 years with Angle's Class III malocclusions were traced, and 12 homologous, soft tissue landmarks digitized. Comparing mean Korean and European-American Class III soft tissue profiles, Procrustes analysis established statistical difference (P < 0.001) between the configurations, and this difference was also true at all seven age groups tested (P < 0.001). Comparing the overall European-American and Korean transformation, thin-plate spline analysis indicated that both affine and non-affine transformations contribute towards the total spline (deformation) of the averaged Class III soft tissue configurations. For non-affine transformations, partial warp (PW) 8 had the highest magnitude, indicating large-scale deformations visualized as labio-mental protrusion, predominantly. In addition, PW9, PW4, and PW5 also had high magnitudes, demonstrating labio-mental vertical compression and antero-posterior compression of the lower labio-mental soft tissues. Thus, Korean children with Class III malocclusions demonstrate antero-posterior and vertical deformations of the labio-mental soft tissue complex with respect to their European-American counterparts. Morphological heterogeneity of the soft tissue integument in subjects of diverse ethnic origin may obscure the underlying skeletal morphology, but the soft tissue integument appears to have minimal ontogenetic association with Class III malocclusions.

Volcanic investigations in the Commonwealth of the Northern Mariana Islands, April to May 1994

USGS Publications Warehouse

Sako, M.K.; Trusdell, F.A.; Koyanagi, R.Y.; Kojima, George; Moore, R.B.

1995-01-01

We conclude that the low and infrequent shallow seismicity, lack of significant deformation, and low fumarole temperatures suggest that no eruption is likely soon on Agrihan and Alamagan. Anatahan's deformation pattern continues to behave in an erratic manner. Because f the lack of seismicity, it seems unlikely that an eruption of Anatahan will occur soon. The persistent volcanic tremor and significant EDM changes on Mount Pagan mean that small explosive eruptions will continue to occur.

Fast and robust multimodal image registration using a local derivative pattern.

PubMed

Jiang, Dongsheng; Shi, Yonghong; Chen, Xinrong; Wang, Manning; Song, Zhijian

2017-02-01

Deformable multimodal image registration, which can benefit radiotherapy and image guided surgery by providing complementary information, remains a challenging task in the medical image analysis field due to the difficulty of defining a proper similarity measure. This article presents a novel, robust and fast binary descriptor, the discriminative local derivative pattern (dLDP), which is able to encode images of different modalities into similar image representations. dLDP calculates a binary string for each voxel according to the pattern of intensity derivatives in its neighborhood. The descriptor similarity is evaluated using the Hamming distance, which can be efficiently computed, instead of conventional L1 or L2 norms. For the first time, we validated the effectiveness and feasibility of the local derivative pattern for multimodal deformable image registration with several multi-modal registration applications. dLDP was compared with three state-of-the-art methods in artificial image and clinical settings. In the experiments of deformable registration between different magnetic resonance imaging (MRI) modalities from BrainWeb, between computed tomography and MRI images from patient data, and between MRI and ultrasound images from BITE database, we show our method outperforms localized mutual information and entropy images in terms of both accuracy and time efficiency. We have further validated dLDP for the deformable registration of preoperative MRI and three-dimensional intraoperative ultrasound images. Our results indicate that dLDP reduces the average mean target registration error from 4.12 mm to 2.30 mm. This accuracy is statistically equivalent to the accuracy of the state-of-the-art methods in the study; however, in terms of computational complexity, our method significantly outperforms other methods and is even comparable to the sum of the absolute difference. The results reveal that dLDP can achieve superior performance regarding both accuracy and time efficiency in general multimodal image registration. In addition, dLDP also indicates the potential for clinical ultrasound guided intervention. © 2016 The Authors. Medical Physics published by Wiley Periodicals, Inc. on behalf of American Association of Physicists in Medicine.

Global latitudinal species diversity gradient in deep-sea benthic foraminifera

NASA Astrophysics Data System (ADS)

Culver, Stephen J.; Buzas, Martin A.

2000-02-01

Global scale patterns of species diversity for modern deep-sea benthic foraminifera, an important component of the bathyal and abyssal meiofauna, are examined using comparable data from five studies in the Atlantic, ranging over 138° of latitude from the Norwegian Sea to the Weddell Sea. We show that a pattern of decreasing diversity with increasing latitude characterises both the North and South Atlantic. This pattern is confirmed for the northern hemisphere by independent data from the west-central North Atlantic and the Arctic basin. Species diversity in the North Atlantic northwards from the equator is variable until a sharp fall in the Norwegian Sea (ca. 65°N). In the South Atlantic species diversity drops from a maximum in latitudes less than 30°S and then decreases slightly from 40 to 70°S. For any given latitude, North Atlantic diversity is generally lower than in the South Atlantic. Both ecological and historical factors related to food supply are invoked to explain the formation and maintenance of the latitudinal gradient of deep-sea benthic foraminiferal species diversity. The gradient formed some 36 million years ago when global climatic cooling led to seasonally fluctuating food supply in higher latitudes.

Dramatic Increases of Soil Microbial Functional Gene Diversity at the Treeline Ecotone of Changbai Mountain.

PubMed

Shen, Congcong; Shi, Yu; Ni, Yingying; Deng, Ye; Van Nostrand, Joy D; He, Zhili; Zhou, Jizhong; Chu, Haiyan

2016-01-01

The elevational and latitudinal diversity patterns of microbial taxa have attracted great attention in the past decade. Recently, the distribution of functional attributes has been in the spotlight. Here, we report a study profiling soil microbial communities along an elevation gradient (500-2200 m) on Changbai Mountain. Using a comprehensive functional gene microarray (GeoChip 5.0), we found that microbial functional gene richness exhibited a dramatic increase at the treeline ecotone, but the bacterial taxonomic and phylogenetic diversity based on 16S rRNA gene sequencing did not exhibit such a similar trend. However, the β-diversity (compositional dissimilarity among sites) pattern for both bacterial taxa and functional genes was similar, showing significant elevational distance-decay patterns which presented increased dissimilarity with elevation. The bacterial taxonomic diversity/structure was strongly influenced by soil pH, while the functional gene diversity/structure was significantly correlated with soil dissolved organic carbon (DOC). This finding highlights that soil DOC may be a good predictor in determining the elevational distribution of microbial functional genes. The finding of significant shifts in functional gene diversity at the treeline ecotone could also provide valuable information for predicting the responses of microbial functions to climate change.

Landscape genomics reveals altered genome wide diversity within revegetated stands of Eucalyptus microcarpa (Grey Box).

PubMed

Jordan, Rebecca; Dillon, Shannon K; Prober, Suzanne M; Hoffmann, Ary A

2016-12-01

In order to contribute to evolutionary resilience and adaptive potential in highly modified landscapes, revegetated areas should ideally reflect levels of genetic diversity within and across natural stands. Landscape genomic analyses enable such diversity patterns to be characterized at genome and chromosomal levels. Landscape-wide patterns of genomic diversity were assessed in Eucalyptus microcarpa, a dominant tree species widely used in revegetation in Southeastern Australia. Trees from small and large patches within large remnants, small isolated remnants and revegetation sites were assessed across the now highly fragmented distribution of this species using the DArTseq genomic approach. Genomic diversity was similar within all three types of remnant patches analysed, although often significantly but only slightly lower in revegetation sites compared with natural remnants. Differences in diversity between stand types varied across chromosomes. Genomic differentiation was higher between small, isolated remnants, and among revegetated sites compared with natural stands. We conclude that small remnants and revegetated sites of our E. microcarpa samples largely but not completely capture patterns in genomic diversity across the landscape. Genomic approaches provide a powerful tool for assessing restoration efforts across the landscape. © 2016 The Authors. New Phytologist © 2016 New Phytologist Trust.

The impact of patient self assessment of deformity on HRQL in adults with scoliosis

PubMed Central

Tones, Megan J; Moss, Nathan D

2007-01-01

Background Body image and HRQL are significant issues for patients with scoliosis due to cosmetic deformity, physical and psychological symptoms, and treatment factors. A selective review of scoliosis literature revealed that self report measures of body image and HRQL share unreliable correlations with radiographic measures and clinician recommendations for surgery. However, current body image and HRQL measures do not indicate which aspects of scoliosis deformity are the most distressing for patients. The WRVAS is an instrument designed to evaluate patient self assessment of deformity, and may show some promise in identifying aspects of deformity most troubling to patients. Previous research on adolescents with scoliosis supports the use of the WRVAS as a clinical tool, as the instrument shares strong correlations with radiographic measures and quality of life instruments. There has been limited use of this instrument on adult populations. Methods The WRVAS and the SF-36v2, a HRQL measure, were administered to 71 adults with scoliosis, along with a form to report age and gender. Preliminary validation analyses were performed on the WRVAS (floor and ceiling effects, internal consistency and collinearity, correlations with the SF-36v2, and multiple regression with the WRVAS total score as the predictor, and SF-36v2 scores as outcomes). Results The psychometric properties of the WRVAS were acceptable. Older participants perceived their deformities as more severe than younger participants. More severe deformities were associated with lower scores on the Physical Component Summary Score of the SF-36v2. Total WRVAS score also predicted Physical Component Summary scores. Conclusion The results of the current study indicate that the WRVAS is a reliable tool to use with adult patients, and that patient self assessment of deformity shared a relationship with physical rather than psychological aspects of HRQL. The current and previous studies concur that revision of the WRVAS is necessary to more accurately represent the diversity of scoliosis deformities. Ability to identify disturbing aspects of deformity could potentially be improved by evaluating each WRVAS items against indicators of pain, physical/psychosocial function, and self image from previous measures such as the SRS, SF-36 or BSSQ-deformity. PMID:17935634

Morphological investigations of cells that adhered to the irregular patterned polydimethylsiloxane (PDMS) surface without reagents.

PubMed

Chung, Sung Hee; Min, Junhong

2009-07-01

Polydimethylsiloxane (PDMS) surface consisting irregular pattern was investigated to develop cell-based biochip using PDMS. PDMS surface was modified with nano- and micro-combined patterns using surface deformation technology. Hydrophobicity of nano-patterned PDMS surface was sustained. Nevertheless it has irregular patterns consisting of micro- and nano-patterns. According to atomic force microscopy (AFM), scanning electron microscopy (SEM) and confocal microscopy results by immunostaining method, human mammary epithelial cells (HMEC) adhered well on irregularly patterned surface without any reagents such as gelatin and collagen, compared to commercial culture dish. It implies PDMS material can be utilized as template for cell-based biochip without any reagents.

Evaluation of the crustal deformations in the northern region of Lake Nasser (Egypt) derived from 8 years of GPS campaign observations

NASA Astrophysics Data System (ADS)

Rayan, A.; Fernandes, R. M. S.; Khalil, H. A.; Mahmoud, S.; Miranda, J. M.; Tealab, A.

2010-04-01

The proper evaluation of crustal deformations in the Aswan (Egypt) region is crucial due to the existence of one major artificial structure: the Aswan High Dam. This construction induced the creation of one of the major artificial lakes: Lake Nasser, which has a surface area of about 5200 km 2 with a maximum capacity of 165 km 3. The lake is nearly 550 km long (more than 350 km within Egypt and the remainder in Sudan) and 35 km across at its widest point. Great attention has focused on this area after the November 14, 1981 earthquake ( ML = 5.7), with its epicenter southwest of the High Dam. In order to evaluate the present-day kinematics of the region, its relationship with increasing seismicity, and the possible influence of the Aswan High Dam operation, a network of 11 GPS sites was deployed in the area. This network has been reobserved every year since 2000 in campaign style. We present here the results of the analysis of the GPS campaign time-series. These time-series are already long enough to derive robust solutions for the motions of these stations. The computed trends are analyzed within the framework of the geophysical and geological settings of this region. We show that the observed displacements are significant, pointing to a coherent intraplate extensional deformation pattern, where some of the major faults (e.g., dextral strike-slip Kalabsha fault and normal Dabud fault) correspond to gradients of the surface deformation field. We also discuss the possible influence of the water load on the long-term deformation pattern.

Vertical deformation at western part of Sumatra

DOE Office of Scientific and Technical Information (OSTI.GOV)

Febriyani, Caroline, E-mail: caroline.fanuel@students.itb.ac.id; Prijatna, Kosasih, E-mail: prijatna@gd.itb.ac.id; Meilano, Irwan, E-mail: irwan.meilano@gd.itb.ac.id

2015-04-24

This research tries to make advancement in GPS signal processing to estimate the interseismic vertical deformation field at western part of Sumatra Island. The data derived by Continuous Global Positioning System (CGPS) from Badan Informasi Geospasial (BIG) between 2010 and 2012. GPS Analyze at Massachusetts Institute of Technology (GAMIT) software and Global Kalman Filter (GLOBK) software are used to process the GPS signal to estimate the vertical velocities of the CGPS station. In order to minimize noise due to atmospheric delay, Vienna Mapping Function 1 (VMF1) is used as atmospheric parameter model and include daily IONEX file provided by themore » Center for Orbit Determination in Europe (CODE) as well. It improves GAMIT daily position accuracy up to 0.8 mm. In a second step of processing, the GLOBK is used in order to estimate site positions and velocities in the ITRF08 reference frame. The result shows that the uncertainties of estimated displacement velocity at all CGPS stations are smaller than 1.5 mm/yr. The subsided deformation patterns are seen at the northern and southern part of west Sumatra. The vertical deformation at northern part of west Sumatra indicates postseismic phase associated with the 2010 and 2012 Northern Sumatra earthquakes and also the long-term postseismic associated with the 2004 and 2005 Northern Sumatra earthquakes. The uplifted deformation patterns are seen from Bukit Tinggi to Seblat which indicate a long-term interseismic phase after the 2007 Bengkulu earthquake and 2010 Mentawai earthquake. GANO station shows a subsidence at rate 12.25 mm/yr, indicating the overriding Indo-Australia Plate which is dragged down by the subducting Southeast Asian Plate.« less

The resolution of reservoir dynamics with noise based technologies: A case study from the 2006 Basel injection experiment

NASA Astrophysics Data System (ADS)

Hillers, Gregor; Husen, Stephan; Obermann, Anne; Planes, Thomas; Campillo, Michel; Larose, Eric

2014-05-01

We explore the applicability of noise-based monitoring and imaging techniques in the context of the 2006 Basel stimulation experiment using data from five borehole velocimeters and five surface accelerometers located around the injection site. We observe a significant perturbation of medium properties associated with the reservoir stimulation. The transient perturbation, with a duration of 20-30 days, reaches its maximum about 15 days after shut in, when microseismic activity has ceased; it is thus associated with aseismic deformation. Inverting relative velocity change and decorrelation observations using techniques developed and applied on laboratory and local to regional seismological scales, we can image the associated deformation pattern. We discuss limits of the the frequency- and lapse-time dependent resolution and suggestions for improvements considering the 3-D network geometry together with wave propagation models. The depth sensitivity of the analyzed wave field indicates resolution of perturbation in the shallow parts of the sedimentary layer above the stimulated deep volume located in the crystalline base layer. The deformation pattern is similar to InSAR/satellite observations associated with CO2 sequestration experiments, and indicates the transfer of deformation beyond scales associated with the instantaneously stimulated volume. Our detection and localization of delayed induced shallow aseismic transient deformation indicates that monitoring the evolution of reservoir properties using the ambient seismic field provides observables that complement information obtained with standard microseismic approaches. The results constitute a significant advance for the resolution of reservoir dynamics; the technology has the potential to provide critical constraints in related geotechnical situations associated with fluid injection, fracking, (nuclear) waste management, and carbon capture and storage.

Distributed and Localized Deformation Along the Lebanese Restraining Bend from Geomorphic Observations and Modeling

NASA Astrophysics Data System (ADS)

Goren, L.; Castelltort, S.; Klinger, Y.

2014-12-01

The Dead Sea Fault System changes its orientation across Lebanon and forms a restraining bend. The oblique deformation along the Lebanese restraining bend is characterized by a complex suite of tectonic structures, among which, the Yammouneh Fault (YF), is believed to be the main strand that relays deformation from the southern section to the northern section of the Dead Sea Fault System. However, uncertainties regarding slip rates and strain partitioning in Lebanon still prevail. Here, we use morphometric analysis together with analytical and numerical models to constrain rates and modes of distributed and localized deformation along the Lebanese restraining bend.The rivers that drain the western flank of Mount Lebanon show a consistent counterclockwise rotation with respect to an expected orogen perpendicular orientation. Moreover, a pattern of divide disequilibrium in between these rivers emerges from an application of the χ mapping technique, which aims at estimating the degree of geometrical and topological disequilibrium in river networks. These geometrical patterns are compatible with simulation results using a landscape evolution model, which imposes a distributed velocity field along a domain that represents the western flank of Mount Lebanon. We further develop an analytical model that relates the river orientation to a set of kinematic parameters that represents a combined pure and simple shear strain field, and we find the parameters that best explain the present orientation of the western Lebanon rivers. Our results indicate that distributed deformation to the west of the YF takes as much as 30% of the relative Arabia-Sinai plate velocity since the late Miocene, and that the average slip rate along the YF during the same time interval has been 3.8-4.4 mm/yr. The theoretical model can further explain the inferred rotation from Paleomagnetic measurements.

Modulation of the thermo-rheological properties of the crust beneath Ischia Island (Southern Italy) on the ground deformation pattern

NASA Astrophysics Data System (ADS)

Castaldo, Raffaele; Gola, Gianluca; Santilano, Alessandro; De Novellis, Vincenzo; Pepe, Susi; Manzo, Mariarosaria; Manzella, Adele; Tizzani, Pietro

2017-04-01

We present a model able to simulate the physical process responsible for the long-term ground deformation of Ischia Island Volcano (Southern Italy) by considering the role of the thermo-rheological properties of the crust. To this aim, we develop and implement in a Finite Element (FE) environment an innovative approach that integrates and homogenizes a large amount of data derived from several and different observation techniques (i.e, geological, geophysical and remote sensing). In detail, the main steps of the proposed approach are: (i) the generation of a 3D geological model of the crust beneath the Island by merging the available geological and geophysical information; (ii) the optimization of a 3D thermal model by exploiting the thermal measurements available in literature; (iii) the definition of the 3D B/D (Brittle/Ductile) transition by using the temperature distribution of the crust and the physical information of the rocks; (iv) the optimization of the ground deformation velocity model (that takes into account the rheological stratification) by considering the spatial and temporal information detected via satellite multi-orbit C-Band SAR (Synthetic Aperture Radar) measurements acquired during the 1992-2010 time period. The achieved results allow investigating the physical process responsible for the observed ground deformation pattern. In particular, they reveal how the rheology modulates the spatial and temporal evolution of long-term subsidence phenomenon, highlighting a coupling effect of the viscosities of the rocks and the gravitational loading of the volcano edifice. Moreover, the achieved results provide a very detailed and realistic image of the subsurface crust of the Ischia Island Volcano in order to study the ongoing deformation phenomena.

Process, pattern and scale: hydrogeomorphology and plant diversity in forested wetlands across multiple spatial scales

NASA Astrophysics Data System (ADS)

Alexander, L.; Hupp, C. R.; Forman, R. T.

2002-12-01

Many geodisturbances occur across large spatial scales, spanning entire landscapes and creating ecological phenomena in their wake. Ecological study at large scales poses special problems: (1) large-scale studies require large-scale resources, and (2) sampling is not always feasible at the appropriate scale, and researchers rely on data collected at smaller scales to interpret patterns across broad regions. A criticism of landscape ecology is that findings at small spatial scales are "scaled up" and applied indiscriminately across larger spatial scales. In this research, landscape scaling is addressed through process-pattern relationships between hydrogeomorphic processes and patterns of plant diversity in forested wetlands. The research addresses: (1) whether patterns and relationships between hydrogeomorphic, vegetation, and spatial variables can transcend scale; and (2) whether data collected at small spatial scales can be used to describe patterns and relationships across larger spatial scales. Field measurements of hydrologic, geomorphic, spatial, and vegetation data were collected or calculated for 15- 1-ha sites on forested floodplains of six (6) Chesapeake Bay Coastal Plain streams over a total area of about 20,000 km2. Hydroperiod (day/yr), floodplain surface elevation range (m), discharge (m3/s), stream power (kg-m/s2), sediment deposition (mm/yr), relative position downstream and other variables were used in multivariate analyses to explain differences in species richness, tree diversity (Shannon-Wiener Diversity Index H'), and plant community composition at four spatial scales. Data collected at the plot (400-m2) and site- (c. 1-ha) scales are applied to and tested at the river watershed and regional spatial scales. Results indicate that plant species richness and tree diversity (Shannon-Wiener diversity index H') can be described by hydrogeomorphic conditions at all scales, but are best described at the site scale. Data collected at plot and site scales are tested for spatial heterogeneity across the Chesapeake Bay Coastal Plain using a geostatistical variogram, and multiple regression analysis is used to relate plant diversity, spatial, and hydrogeomorphic variables across Coastal Plain regions and hydrologic regimes. Results indicate that relationships between hydrogeomorphic processes and patterns of plant diversity at finer scales can proxy relationships at coarser scales in some, not all, cases. Findings also suggest that data collected at small scales can be used to describe trends across broader scales under limited conditions.

Deformation of Tibetan lithosphere and asthenosphere as inferred from broadband surface waves

NASA Astrophysics Data System (ADS)

Agius, Matthew; Lebedev, Sergei

2014-05-01

The numerous seismic stations deployed across Tibet and the surrounding regions in recent years have greatly increased the data coverage across the Plateau. Despite the numerous studies of its crust, however, how the convergence of northward moving India and stable Eurasia is accommodated today is still debated. Regarding the lateral distribution of deformation, end-member models invoke deformation at narrow boundaries between "rigid blocks" and, alternatively, "continuous deformation" with viscous behaviour of the lithosphere. Regarding the vertical distribution of deformation, end-member models include "vertically coherent deformation" within the entire lithospheric thickness, and "channel flow" in which mechanically weak mid-lower crust undergoes flow that is distinctly different from the motions of the (stronger) layers above and below. Broad-band surface waves provide resolving power from the upper crust down to the asthenosphere, for both isotropic-average shear-wave speeds (proxies for composition and temperature) and the radial and azimuthal shear-wave anisotropy (indicative of the patterns of deformation and flow). We measured highly accurate Love- and Rayleigh-wave phase-velocity curves in broad period ranges (5-200 s) for a few tens of pairs and groups of stations across Tibet, combining, in each case, hundreds of inter-station measurements, made with cross-correlation and waveform-inversion methods. Robust shear-velocity profiles were then determined by series of non-linear inversions, yielding depth-dependent ranges of shear speeds and radial anisotropy consistent with the data. Azimuthal anisotropy in the crust and upper mantle was determined by surface-wave tomography and, also, by sub-array analysis targeting the anisotropy amplitude. The Tibetan middle crust is characterised by very low shear-wave speeds, as observed previously, however with strong variations across the plateau. The mid-crustal low-velocity zone, probably indicating partial melt and low viscosity, shows particularly low wave speeds in northern Tibet (3.08-3.43 km/s). The similarity of phase-velocity curves for neighbouring station pairs across large regions within Tibet and the coherent pattern of anisotropy within them suggest that deformation is diffused across broad areas. The maximum extension directions, derived from crustal azimuthal anisotropy, show W-E and NW-SE fast directions in central and eastern Tibet, respectively. The correlation of azimuthal anisotropy with the surface strain indicates that the dominant pattern of deformation in the middle crust is the same as that in the upper crust. Furthermore, the close agreement of anisotropy and the extensional component of the current strain rate field with the traces of sutures implies that the dominant deformation mechanism within the plateau has not changed since the initiation of continental collision and is still governed by the northward push of India. A warm Tibetan lithosphere and asthenosphere lay beneath the north-central and north-eastern plateau. SSW-NNE asthenospheric flow beneath north-eastern Tibet is evidenced by azimuthal anisotropy constrained by our data, with the fast-propagation direction parallel to that of India's plate motion. This suggests that the flow is associated with India's northward subduction beneath the Tibetan lithosphere and asthenosphere under the central and eastern plateau. The distributed, multi-layered azimuthal anisotropy beneath Tibet, with different fast-propagations directions in the crust and asthenospheric mantle, accounts for the complexity of published shear-wave splitting observations.

Genetic diversity patterns of microeukaryotic plankton communities in Shenhu Bay, southeast China

NASA Astrophysics Data System (ADS)

Zhang, Wenjing; Pan, Yongbo; Yu, Lingyu; Liu, Lemian

2017-06-01

Microeukaryotic plankton is an abundant and diverse component of marine environments and plays an important role in microbial food webs. However, few studies have been conducted on the genetic diversity of microeukaryotes in the subtropical bays of China. In the present study, we investigated the microeukaryotic plankton in the Shenhu Bay by using denaturing gradient gel electrophoresis (DGGE) and sequencing of prominent bands. Our results indicated that Copepoda and Dinophyceae were the most diverse groups, and that the microeukaryotic communities varied significantly between summer and autumn, with the autumn communities exhibited a higher diversity than summer communities. Furthermore, the community composition and diversity from both surface and bottom waters showed more significant differences in summer than in autumn. Environmental parameters also displayed obvious seasonal patterns. Redundancy analysis (RDA) showed that temperature was the most significant environmental factor shaping the seasonal patterns of the microplanktonic members in the Shenhu Bay. Community-level molecular techniques such as DGGE appear as useful tools to detect the presence of red tide causing species and to guide the management of coastal water mariculture.

Patterns of Diversity and Abundance of Carrion Insect Assemblages in the Natural Park “Hoces del Río Riaza” (Central Spain)

PubMed Central

Baz, Arturo; Cifrián, Blanca; Martín-Vega, Daniel

2014-01-01

Abstract The patterns of diversity and abundance of the carrion insect species in the different habitats of the Natural Park “Hoces del Río Riaza” (central Spain) were studied with the use of carrion-baited traps. Representativeness of the inventories was assessed with the calculation of randomized species richness curves and nonparametric estimators. Coleoptera families, Silphidae and Dermestidae, and Diptera families, Calliphoridae and Muscidae, were dominant in every sampling habitat, but differences in the patterns of diversity and abundance were found. Lusitanian oakwood and riparian forest were the most diverse habitats with high abundance of saprophagous species, whereas more open (i.e., exposed to continuous sunlight during the day) habitats showed lower diversity values and a different species composition and distribution of species abundance, favoring thermophilous species and necrophagous species with high tolerance to different environmental conditions. Differences in the bioclimatical features of the sampled habitats are suggested to explain the composition and diversity of the carrion insect assemblages in different environments. PMID:25368080

Landscape-scale evaluation of genetic structure among barrier-isolated populations of coastal cutthroat trout, Oncorhynchus clarkii clarkii

USGS Publications Warehouse

Guy, T.J.; Gresswell, R.E.; Banks, M.A.

2008-01-01

Relationships among landscape structure, stochastic disturbance, and genetic diversity were assessed by examining interactions between watershed-scale environmental factors and genetic diversity of coastal cutthroat trout (Oncorhynchus clarkii clarkii) in 27 barrier-isolated watersheds from western Oregon, USA. Headwater populations of coastal cutthroat trout were genetically differentiated (mean FST = 0.33) using data from seven microsatellite loci (2232 individuals), but intrapopulation microsatellite genetic diversity (mean number of alleles per locus = 5, mean He = 0.60) was only moderate. Genetic diversity of coastal cutthroat trout was greater (P = 0.02) in the Coast Range ecoregion (mean alleles = 47) than in the Cascades ecoregion (mean alleles = 30), and differences coincided with indices of regional within-watershed complexity and connectivity. Furthermore, regional patterns of diversity evident from isolation-by-distance plots suggested that retention of within-population genetic diversity in the Coast Range ecoregion is higher than that in the Cascades, where genetic drift is the dominant factor influencing genetic patterns. Thus, it appears that physical landscape features have influenced genetic patterns in these populations isolated from short-term immigration. ?? 2008 NRC.

Deformation and stress change associated with plate interaction at subduction zones: a kinematic modelling

NASA Astrophysics Data System (ADS)

Zhao, Shaorong; Takemoto, Shuzo

2000-08-01

The interseismic deformation associated with plate coupling at a subduction zone is commonly simulated by the steady-slip model in which a reverse dip-slip is imposed on the down-dip extension of the locked plate interface, or by the backslip model in which a normal slip is imposed on the locked plate interface. It is found that these two models, although totally different in principle, produce similar patterns for the vertical deformation at a subduction zone. This suggests that it is almost impossible to distinguish between these two models by analysing only the interseismic vertical deformation observed at a subduction zone. The steady-slip model cannot correctly predict the horizontal deformation associated with plate coupling at a subduction zone, a fact that is proved by both the numerical modelling in this study and the GPS (Global Positioning System) observations near the Nankai trough, southwest Japan. It is therefore inadequate to simulate the effect of the plate coupling at a subduction zone by the steady-slip model. It is also revealed that the unphysical assumption inherent in the backslip model of imposing a normal slip on the locked plate interface makes it impossible to predict correctly the horizontal motion of the subducted plate and the stress change within the overthrust zone associated with the plate coupling during interseismic stages. If the analysis made in this work is proved to be correct, some of the previous studies on interpreting the interseismic deformation observed at several subduction zones based on these two models might need substantial revision. On the basis of the investigations on plate interaction at subduction zones made using the finite element method and the kinematic/mechanical conditions of the plate coupling implied by the present plate tectonics, a synthesized model is proposed to simulate the kinematic effect of the plate interaction during interseismic stages. A numerical analysis shows that the proposed model, designed to simulate the motion of a subducted slab, can correctly produce the deformation and the main pattern of stress concentration associated with plate coupling at a subduction zone. The validity of the synthesized model is examined and partially verified by analysing the horizontal deformation observed by GPS near the Nankai trough, southwest Japan.

Waiting in the wings: what can we learn about gene co-option from the diversification of butterfly wing patterns?

PubMed Central

Wallbank, Richard W. R.; Hanly, Joseph J.

2017-01-01

A major challenge is to understand how conserved gene regulatory networks control the wonderful diversity of form that we see among animals and plants. Butterfly wing patterns are an excellent example of this diversity. Butterfly wings form as imaginal discs in the caterpillar and are constructed by a gene regulatory network, much of which is conserved across the holometabolous insects. Recent work in Heliconius butterflies takes advantage of genomic approaches and offers insights into how the diversification of wing patterns is overlaid onto this conserved network. WntA is a patterning morphogen that alters spatial information in the wing. Optix is a transcription factor that acts later in development to paint specific wing regions red. Both of these loci fit the paradigm of conserved protein-coding loci with diverse regulatory elements and developmental roles that have taken on novel derived functions in patterning wings. These discoveries offer insights into the ‘Nymphalid Ground Plan’, which offers a unifying hypothesis for pattern formation across nymphalid butterflies. These loci also represent ‘hotspots’ for morphological change that have been targeted repeatedly during evolution. Both convergent and divergent evolution of a great diversity of patterns is controlled by complex alleles at just a few genes. We suggest that evolutionary change has become focused on one or a few genetic loci for two reasons. First, pre-existing complex cis-regulatory loci that already interact with potentially relevant transcription factors are more likely to acquire novel functions in wing patterning. Second, the shape of wing regulatory networks may constrain evolutionary change to one or a few loci. Overall, genomic approaches that have identified wing patterning loci in these butterflies offer broad insight into how gene regulatory networks evolve to produce diversity. This article is part of the themed issue ‘Evo-devo in the genomics era, and the origins of morphological diversity’. PMID:27994126

Investigation of the Iterative Phase Retrieval Algorithm for Interferometric Applications

NASA Astrophysics Data System (ADS)

Gombkötő, Balázs; Kornis, János

2010-04-01

Sequentially recorded intensity patterns reflected from a coherently illuminated diffuse object can be used to reconstruct the complex amplitude of the scattered beam. Several iterative phase retrieval algorithms are known in the literature to obtain the initially unknown phase from these longitudinally displaced intensity patterns. When two sequences are recorded in two different states of a centimeter sized object in optical setups that are similar to digital holographic interferometry-but omitting the reference wave-, displacement, deformation, or shape measurement is theoretically possible. To do this, the retrieved phase pattern should contain information not only about the intensities and locations of the point sources of the object surface, but their relative phase as well. Not only experiments require strict mechanical precision to record useful data, but even in simulations several parameters influence the capabilities of iterative phase retrieval, such as object to camera distance range, uniform or varying camera step sequence, speckle field characteristics, and sampling. Experiments were done to demonstrate this principle with an as large as 5×5 cm sized deformable object as well. Good initial results were obtained in an imaging setup, where the intensity pattern sequences were recorded near the image plane.

A STATISTICAL THERMODYNAMIC MODEL OF THE ORGANIZATIONAL ORDER OF VEGETATION. (R827676)

EPA Science Inventory

The complex pattern of vegetation is the macroscopic manifestation of biological diversity and the ecological order in space and time. How is this overwhelmingly diverse, yet wonderfully ordered spatial pattern formed, and how does it evolve? To answer these questions, most tr...

IMPLICATIONS OF MATING PATTERNS FOR CONSERVATION OF THE ENDANGERED PLANT ERIOGONUM OVALIFOLIUM VAR. VINEUM (POLYGONACEAE). (R826102)

EPA Science Inventory

Mating patterns have direct application to: conservation because of their influence on structuring genetic diversity within and among populations and on maintaining that diversity over time. We measured population and family outcrossing rates, biparental inbreeding correlation of...

Formation mechanisms of periodic longitudinal microstructure and texture patterns in friction stir welded magnesium AZ80

DOE Office of Scientific and Technical Information (OSTI.GOV)

Hiscocks, J., E-mail: j.hiscocks@queensu.ca

Many studies of friction stir welding have shown that periodicity of metal flow around the tool pin may result in the formation of periodic differences in microstructure and texture in the weld nugget area correlated with the weld pitch. The current work investigates the periodicity of magnesium weld microtexture in the nugget region and its association with material flow using optical and electron microscopy. Two welds created in AZ80 at different processing conditions are presented in detail, one illustrating periodic longitudinal texture change, and one showing for the first time that periodic variations in texture, grain size, or composition aremore » not defining features of periodic nugget flow. While nugget texture is dominated by shear deformation, it was found here to be affected to a lesser degree by compaction of material behind the welding tool, which led to reduction in intensity of the shear texture fiber. The decreased tendency for magnesium based alloys to form periodic patterns as compared to aluminum based alloys is explained with reference to the shear textures. - Highlights: •It is shown here that periodic material flow in the nugget does not necessitate longitudinal texture patterns. •Longitudinal texture patterns are shown to be present or absent in Mg AZ80 based on processing conditions. •Texture in the nugget is mainly dictated by shear deformation, but has measurable effects from other deformation modes. •Explanation of why longitudinal texture change is frequently reported in aluminum but not magnesium alloys is provided. •A new vector visualization of material flow based on EBSD data analysis is shown.« less

Fungal biogeography. Global diversity and geography of soil fungi.

PubMed

Tedersoo, Leho; Bahram, Mohammad; Põlme, Sergei; Kõljalg, Urmas; Yorou, Nourou S; Wijesundera, Ravi; Villarreal Ruiz, Luis; Vasco-Palacios, Aída M; Thu, Pham Quang; Suija, Ave; Smith, Matthew E; Sharp, Cathy; Saluveer, Erki; Saitta, Alessandro; Rosas, Miguel; Riit, Taavi; Ratkowsky, David; Pritsch, Karin; Põldmaa, Kadri; Piepenbring, Meike; Phosri, Cherdchai; Peterson, Marko; Parts, Kaarin; Pärtel, Kadri; Otsing, Eveli; Nouhra, Eduardo; Njouonkou, André L; Nilsson, R Henrik; Morgado, Luis N; Mayor, Jordan; May, Tom W; Majuakim, Luiza; Lodge, D Jean; Lee, Su See; Larsson, Karl-Henrik; Kohout, Petr; Hosaka, Kentaro; Hiiesalu, Indrek; Henkel, Terry W; Harend, Helery; Guo, Liang-dong; Greslebin, Alina; Grelet, Gwen; Geml, Jozsef; Gates, Genevieve; Dunstan, William; Dunk, Chris; Drenkhan, Rein; Dearnaley, John; De Kesel, André; Dang, Tan; Chen, Xin; Buegger, Franz; Brearley, Francis Q; Bonito, Gregory; Anslan, Sten; Abell, Sandra; Abarenkov, Kessy

2014-11-28

Fungi play major roles in ecosystem processes, but the determinants of fungal diversity and biogeographic patterns remain poorly understood. Using DNA metabarcoding data from hundreds of globally distributed soil samples, we demonstrate that fungal richness is decoupled from plant diversity. The plant-to-fungus richness ratio declines exponentially toward the poles. Climatic factors, followed by edaphic and spatial variables, constitute the best predictors of fungal richness and community composition at the global scale. Fungi show similar latitudinal diversity gradients to other organisms, with several notable exceptions. These findings advance our understanding of global fungal diversity patterns and permit integration of fungi into a general macroecological framework. Copyright © 2014, American Association for the Advancement of Science.

Intelligent Optical Systems Using Adaptive Optics

NASA Technical Reports Server (NTRS)

Clark, Natalie

2012-01-01

Until recently, the phrase adaptive optics generally conjured images of large deformable mirrors being integrated into telescopes to compensate for atmospheric turbulence. However, the development of smaller, cheaper devices has sparked interest for other aerospace and commercial applications. Variable focal length lenses, liquid crystal spatial light modulators, tunable filters, phase compensators, polarization compensation, and deformable mirrors are becoming increasingly useful for other imaging applications including guidance navigation and control (GNC), coronagraphs, foveated imaging, situational awareness, autonomous rendezvous and docking, non-mechanical zoom, phase diversity, and enhanced multi-spectral imaging. The active components presented here allow flexibility in the optical design, increasing performance. In addition, the intelligent optical systems presented offer advantages in size and weight and radiation tolerance.

Seasonal Diversity Patterns of a Coastal Synechococcus Population

NASA Astrophysics Data System (ADS)

Hunter-Cevera, K. R.; Sosik, H. M.; Neubert, M.; Hammar, K.; Post, A.

2016-02-01

Understanding how environmental and ecological factors determine phytoplankton species abundances requires knowledge of the diversity present within a population. For the important primary producer Synechococcus, clades demonstrate differences in temperature tolerance, light acclimation, grazer palatability, and more. Marine Synechococcus populations are often composed of more than one clade, and overall population dynamics will be governed by the types of cells present and by their individual physiological capabilities. We investigate the diversity of the Synechococcus assemblage at the Martha's Vineyard Coastal Observatory with high-throughput sequencing of the V6 hypervariable region of the 16S rRNA gene. Small nucleotide differences within this region allow for resolution of distinct phylotypes that can have a direct correspondence to the well-defined Synechococcus clades. From a three-year time series, we find that the Synechococcus population is dominated by 5 distinct phylotypes, and that each type exhibits a repeatable, seasonal pattern in relative abundance. We use compositional data analysis techniques to investigate the relationships between these patterns and environmental factors. We further interpret these patterns in the context of Synechococcus population dynamics assessed by automated, submersible flow cytometry (FlowCytobot). Observed diel changes in cell size distributions, coupled with a validated matrix population model, provide estimates of in situ population division rates. We find strong evidence that the main seasonal diversity patterns are governed by temperature, but that biological loss agents likely shape the diversity structure for certain times of year. For some phylotypes, relative abundance patterns are also related to light and nutrients. The composition of Synechococcus over the annual cycle appears to directly affect seasonal features of cell abundance patterns, such as the spring bloom.

Full-field 3D deformation measurement: comparison between speckle phase and displacement evaluation.

PubMed

Khodadad, Davood; Singh, Alok Kumar; Pedrini, Giancarlo; Sjödahl, Mikael

2016-09-20

The objective of this paper is to describe a full-field deformation measurement method based on 3D speckle displacements. The deformation is evaluated from the slope of the speckle displacement function that connects the different reconstruction planes. For our experiment, a symmetrical arrangement with four illuminations parallel to the planes (x,z) and (y,z) was used. Four sets of speckle patterns were sequentially recorded by illuminating an object from the four directions, respectively. A single camera is used to record the holograms before and after deformations. Digital speckle photography is then used to calculate relative speckle displacements in each direction between two numerically propagated planes. The 3D speckle displacements vector is calculated as a combination of the speckle displacements from the holograms recorded in each illumination direction. Using the speckle displacements, problems associated with rigid body movements and phase wrapping are avoided. In our experiment, the procedure is shown to give the theoretical accuracy of 0.17 pixels yielding the accuracy of 2×10^-3 in the measurement of deformation gradients.

Spin-dependent γ softness or triaxiality in even-even 132-138Nd nuclei

NASA Astrophysics Data System (ADS)

Chai, Qing-Zhen; Wang, Hua-Lei; Yang, Qiong; Liu, Min-Liang

2015-02-01

The properties of γ instability in rapidly rotating even-even 132-138Nd isotopes have been investigated using the pairing-deformation self-consistent total-Routhian-surface calculations in a deformation space of (β2, γ, β4). It is found that even-even 134-138Nd nuclei exhibit triaxiality in both ground and excited states, even up to high-spin states. The lightest isotope possesses a well-deformed prolate shape without a γ deformation component. The current numerical results are compared with previous calculations and available observables such as quadrupole deformation β2 and the feature of γ-band levels, showing basically a general agreement with the observed trend of γ correlations (e.g. the pattern of the odd-even energy staggering of the γ band). The existing differences between theory and experiment are analyzed and discussed briefly. Supported by National Natural Science Foundation of China (10805040,11175217), Foundation and Advanced Technology Research Program of Henan Province(132300410125) and S & T Research Key Program of Henan Province Education Department (13A140667)

Strain analysis in the Sanandaj-Sirjan HP-LT Metamorphic Belt, SW Iran: Insights from small-scale faults and associated drag folds

NASA Astrophysics Data System (ADS)

Sarkarinejad, Khalil; Keshavarz, Saeede; Faghih, Ali

2015-05-01

This study is aimed at quantifying the kinematics of deformation using a population of drag fold structures associated with small-scale faults in deformed quartzites from Seh-Ghalatoun area within the HP-LT Sanandaj-Sirjan Metamorphic Belt, SW Iran. A total 30 small-scale faults in the quartzite layers were examined to determine the deformation characteristics. Obtained data revealed α0 (initial fault angle) and ω (angle between flow apophyses) are equal to 83° and 32°, respectively. These data yield mean kinematic vorticity number (Wm) equal to 0.79 and mean finite strain (Rs) of 2.32. These results confirm the relative contribution of ∼43% pure shear and ∼57% simple shear components, respectively. The strain partitioning inferred from this quantitative analysis is consistent with a sub-simple or general shear deformation pattern associated with a transpressional flow regime in the study area as a part of the Zagros Orogen. This type of deformation resulted from oblique convergence between the Afro-Arabian and Central-Iranian plates.